BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037256
(680 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/686 (65%), Positives = 551/686 (80%), Gaps = 11/686 (1%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
PS FYD LL+ C L +L+ IHSSL+T G + H A++II Y+ G+ ++AR+LF
Sbjct: 22 PSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLF 81
Query: 66 NSIH------NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
+ H SFL NTM+RAYAN G E ++LY M+R G+ N++T+PFVLK
Sbjct: 82 DHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKV 141
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
CAS + G+VVHG ++RTGF SD +V+AALVDMYAKCG+ D +VFD M +RD+V W
Sbjct: 142 CASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCW 201
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
T MIT YEQAE+P +AL+LF+K Q+EG L D +T +SVASAVGQLGD A +VHGYA+
Sbjct: 202 TAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVL 261
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
N F+ D+ + NSIV MYA+CGNVE+ARLVFD ME+R+ ISWNSML+GY QNG+ ++AL L
Sbjct: 262 NGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSL 321
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F++MQ S+C PNPVTALI+VSAC+YLGS+ LGRK H ++I+S M ID TLRNA+MDMY K
Sbjct: 322 FNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 381
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CGDLDTA MFN+ ER+VSSWNVLI+GYG+HGHG++ALE FS+M EGV+P+ ITFT
Sbjct: 382 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 441
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
SILSACSHAGLIDEGRKCFADMTKLSV+PE+KHYACMVDMLGRAG L EAF +IK++P
Sbjct: 442 SILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 501
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P+D VWGALLLACRIH GEIAAN LFQLEPEHTGY+VLMSNIYAASNKW+EV +R
Sbjct: 502 PSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVR 561
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
++MK++GLKKPAAFSVIE+G ++ GFHTAD+ +PY++EVY+KVES+A+E+KM GY+PDLS
Sbjct: 562 QNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLS 621
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
C LHDVE ED+EH+LNYHSEKLAVAFGIM + +QVTKNLRVC+DCH AF+FIS IY
Sbjct: 622 CVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIY 681
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
RKIIVRD NRFHHF+GG CSC DYW
Sbjct: 682 GRKIIVRDGNRFHHFQGGRCSCGDYW 707
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 893 bits (2308), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/686 (62%), Positives = 526/686 (76%), Gaps = 42/686 (6%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
PS FYD LL+ C L +L+ IHSSL+T G + H A++II Y+ G+ ++AR+LF
Sbjct: 22 PSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLF 81
Query: 66 NSIH------NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
+ H SFL NTM+RAYAN G E ++LY M+R G+ N++T+PFVLK
Sbjct: 82 DHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKV 141
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
CAS + G+VVHG ++RTGF SD +V+AALVDMYAKCG+ D +VFD M +RD+V W
Sbjct: 142 CASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCW 201
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
T MIT YEQAE+P +AL+LF+K Q+EG L D +T +SVASAVGQLGD A
Sbjct: 202 TAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA--------- 252
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
+ +ARLVFD ME+R+ ISWNSML+GY QNG+ ++AL L
Sbjct: 253 ----------------------ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSL 290
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F++MQ S+C PNPVTALI+VSAC+YLGS+ LGRK H ++I+S M ID TLRNA+MDMY K
Sbjct: 291 FNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMK 350
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CGDLDTA MFN+ ER+VSSWNVLI+GYG+HGHG++ALE FS+M EGV+P+ ITFT
Sbjct: 351 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 410
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
SILSACSHAGLIDEGRKCFADMTKLSV+PE+KHYACMVDMLGRAG L EAF +IK++P
Sbjct: 411 SILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSR 470
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P+D VWGALLLACRIH GEIAAN LFQLEPEHTGY+VLMSNIYAASNKW+EV +R
Sbjct: 471 PSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVR 530
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
++MK++GLKKPAAFSVIE+G ++ GFHTAD+ +PY++EVY+KVES+A+E+KM GY+PDLS
Sbjct: 531 QNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLS 590
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
C LHDVE ED+EH+LNYHSEKLAVAFGIM + +QVTKNLRVC+DCH AF+FIS IY
Sbjct: 591 CVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIY 650
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
RKIIVRD NRFHHF+GG CSC DYW
Sbjct: 651 GRKIIVRDGNRFHHFQGGRCSCGDYW 676
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/533 (74%), Positives = 463/533 (86%), Gaps = 6/533 (1%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE-GLLSDSV 212
MYAKCG D K+FDEMS +DLV WT MITAYEQAEKPEEALILF+K QQE GLL+DS+
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
+VSVASAVGQLGDV A VHGYA + +E+LC+ NSI+AM+ +CGN EKARLVFDMM
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
+RD+ISWNSML+GY QNGQA+EALLLFDEM++SDC+P PVTALI+VSAC YLG R LGR
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
KFH +I++S M+ID L NA+MDMYAKCGDL+ A ++FN I P+ERN SWNVLI+GYGM
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
HGHG++ALE FS+M EEGV+P+H TFTSILSACSHAGLIDEGRKCFA+M +LSV E KH
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKH 300
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLE 507
+AC+VDMLGRAG L EAFD+IK+MP PP+D VWGALLLAC+IHG + AA+ L QLE
Sbjct: 301 HACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQLE 360
Query: 508 PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN 567
P HTGY+VLMSNIYAASNKW+EV KLR+DMKNKGLKKPAAFS+IEYGKDI GFHTAD+ N
Sbjct: 361 PNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQEN 420
Query: 568 PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTP 627
PY EVYKK+ES+A+E+KMAGY+PDLSCALHDVE+ED+E MLNYHSEKLAVAFG++ + P
Sbjct: 421 PYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKIDP 480
Query: 628 EAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V++VTKNLRVCNDCHSAF++IS+IY+RKIIVRDANRFHHF+GGTCSC DYW
Sbjct: 481 GMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 170/349 (48%), Gaps = 6/349 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
W MI AY E L L+ M++ G+ ++S V A + VHG
Sbjct: 26 WTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIAVVSVASAVGQLGDVKNAHTVHGYA 85
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
R + + V +++ M+ KCG T+ VFD M RD++SW M++ Y Q + EAL
Sbjct: 86 FRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEAL 145
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+LF + + VT + + SA LG + H + + + D + N+++ MY
Sbjct: 146 LLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMY 205
Query: 257 ARCGNVEKARLVFDMME--KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
A+CG++EKA +F+ + +R+ SWN +++GY +G EAL LF MQ +PN T
Sbjct: 206 AKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHFT 265
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
++SAC++ G GRK + ++ ++ V+DM + G L A ++ ++
Sbjct: 266 FTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEM- 324
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
PS + W L+ +HG+ S +L+ ++P+H + ++S
Sbjct: 325 PSPPSDGVWGALLLACKIHGNMELGKTAASNLLQ--LEPNHTGYYVLMS 371
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G+ A LFN I + + WN +I Y +GH E LEL+S M+ G+ N +
Sbjct: 205 YAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPNHF 264
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TF +L AC+ LI EG+ ++ R + A +VDM + G + + EM
Sbjct: 265 TFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEM 324
>gi|255539985|ref|XP_002511057.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550172|gb|EEF51659.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 543
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 294/431 (68%), Positives = 355/431 (82%), Gaps = 2/431 (0%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
STE YD L+K C+ LA L+QIHS+LTT+ LI ++ HL A+IIIKY +G N ARSLF+
Sbjct: 35 STEIVYDNLVKFCDGLAVLKQIHSALTTNSLITKSPHLAAQIIIKYAKFGYLNCARSLFD 94
Query: 67 --SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
+I D SFLWNTMIRAYAN G C ETLELY MRR+G+SSN+YTFPF+ KACASNS
Sbjct: 95 GINIRGDNRSSFLWNTMIRAYANAGLCFETLELYMLMRRAGVSSNNYTFPFIFKACASNS 154
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
L+L+GKV HGD ++ F SD YV+AALVDMYAKCGQ DG K+FDEM V+DLV WT MIT
Sbjct: 155 LLLQGKVAHGDAVKADFDSDVYVKAALVDMYAKCGQFCDGRKIFDEMPVKDLVCWTAMIT 214
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
AYEQ EKP+EALIL +K QQ GL D VT+VSVASA+GQL D AQ+VH YAI +FL+
Sbjct: 215 AYEQGEKPDEALILLRKMQQHGLFPDEVTMVSVASAIGQLWDAKWAQSVHAYAIRRSFLK 274
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
++ + NSI+AM+ +CGN+EK+ L+FDMM++R++ISWNSML+GY QNGQASEAL LFD+M+
Sbjct: 275 EIFVANSILAMHTKCGNMEKSCLIFDMMDERNVISWNSMLSGYTQNGQASEALFLFDKMR 334
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+S C+PN VTALI+V+AC YLGSR LG KFH +I++S MKID LRNA+MDMYAKCGDL
Sbjct: 335 DSGCEPNSVTALIMVAACAYLGSRHLGGKFHDFILDSKMKIDMNLRNALMDMYAKCGDLK 394
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
TA MFND+HPSERNVSSWNVLI+GYGMHGHG++AL +S+M EE V+P+HITFTSILSA
Sbjct: 395 TAVEMFNDVHPSERNVSSWNVLISGYGMHGHGKEALRLYSRMQEESVEPNHITFTSILSA 454
Query: 425 CSHAGLIDEGR 435
CSHAGLIDEGR
Sbjct: 455 CSHAGLIDEGR 465
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 187/373 (50%), Gaps = 8/373 (2%)
Query: 130 KVVHGDIIRTGFLSDS-YVQAALVDMYAKCGQTDDGCKVFDEMSVR----DLVSWTVMIT 184
K +H + ++ S ++ A ++ YAK G + +FD +++R W MI
Sbjct: 54 KQIHSALTTNSLITKSPHLAAQIIIKYAKFGYLNCARSLFDGINIRGDNRSSFLWNTMIR 113
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
AY A E L L+ ++ G+ S++ T + A +L+ + HG A+ F
Sbjct: 114 AYANAGLCFETLELYMLMRRAGVSSNNYTFPFIFKACASNSLLLQGKVAHGDAVKADFDS 173
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D+ ++ ++V MYA+CG R +FD M +DL+ W +M+T Y Q + EAL+L +MQ
Sbjct: 174 DVYVKAALVDMYAKCGQFCDGRKIFDEMPVKDLVCWTAMITAYEQGEKPDEALILLRKMQ 233
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
P+ VT + + SA L + + H Y I + + + N+++ M+ KCG+++
Sbjct: 234 QHGLFPDEVTMVSVASAIGQLWDAKWAQSVHAYAIRRSFLKEIFVANSILAMHTKCGNME 293
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
+ +F+ + ERNV SWN +++GY +G +AL F +M + G +P+ +T +++A
Sbjct: 294 KSCLIFDMM--DERNVISWNSMLSGYTQNGQASEALFLFDKMRDSGCEPNSVTALIMVAA 351
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM-PLPPNDS 483
C++ G G K + +K ++ ++DM + G L A +M + P N S
Sbjct: 352 CAYLGSRHLGGKFHDFILDSKMKIDMNLRNALMDMYAKCGDLKTAVEMFNDVHPSERNVS 411
Query: 484 VWGALLLACRIHG 496
W L+ +HG
Sbjct: 412 SWNVLISGYGMHG 424
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 290/690 (42%), Positives = 437/690 (63%), Gaps = 15/690 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M+R G + + + ++K+C + L R++H + G + + +G + YT G
Sbjct: 111 MQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVI-VGTALASMYTKCG 169
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
AR +F+ + S WN +I Y+ NG E L L+S M+ +GI NS T V
Sbjct: 170 SLENARQVFDRMPKRDVVS--WNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSV 227
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ CA + +GK +H IR+G SD V LV+MYAKCG + K+F+ M +RD+
Sbjct: 228 MPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDV 287
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
SW +I Y + EAL F + Q G+ +S+T+VSV A L + + Q +HGY
Sbjct: 288 ASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGY 347
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
AI + F + + N++V MYA+CGNV A +F+ M K+++++WN++++GY Q+G EA
Sbjct: 348 AIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEA 407
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L LF EMQ KP+ + ++ AC + + + G++ HGY I S + + + ++D+
Sbjct: 408 LALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDI 467
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAKCG+++TA+ +F + E++V SW +I YG+HGHG AL FS+M E G K DHI
Sbjct: 468 YAKCGNVNTAQKLFERM--PEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHI 525
Query: 417 TFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
FT+IL+ACSHAGL+D+G + F M + + P+++HYAC+VD+LGRAG L EA +IK
Sbjct: 526 AFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKN 585
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
M L P+ +VWGALL ACRIH GE AA +LF+L+P++ GY+VL+SNIYA + +W +V
Sbjct: 586 MSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDV 645
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
KLR+ MK KG+KK SV+ +D+Q F DR +P +++Y +E + +++ AGY+
Sbjct: 646 AKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYV 705
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P+ + AL DVE+E +E++L+ HSEKLA++FGI+N +P +++ KNLRVC+DCH+A +FI
Sbjct: 706 PNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFI 765
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S I R+IIVRDANRFHH + G CSC DYW
Sbjct: 766 SKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/426 (36%), Positives = 243/426 (57%), Gaps = 5/426 (1%)
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
++ + +W I Y NG + L LY M+R+GI+ + F V+KAC S S + G+
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH DII GF SD V AL MY KCG ++ +VFD M RD+VSW +I Y Q +
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P EAL LF + Q G+ +S T+VSV L + + + +H YAI + D+ + N
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MYA+CGNV A +F+ M RD+ SWN+++ GY N Q EAL F+ MQ KPN
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T + ++ AC +L + + G++ HGY I S + + + NA+++MYAKCG++++A +F
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFE 381
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ++NV +WN +I+GY HGH +AL F +M +G+KPD S+L AC+H +
Sbjct: 382 RM--PKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLAL 439
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLL 490
++G++ + + V +VD+ + G + A + ++M P D V W ++L
Sbjct: 440 EQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERM--PEQDVVSWTTMIL 497
Query: 491 ACRIHG 496
A IHG
Sbjct: 498 AYGIHG 503
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 287/678 (42%), Positives = 431/678 (63%), Gaps = 16/678 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C L R+IH G + + A +I Y+ +G ARSLF+ +
Sbjct: 221 FPPVLKACGTLVDGRKIHCWAFKLGF-QWNVFVAASLIHMYSRFGFTGIARSLFDDMPFR 279
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI NG+ + L++ MR GI N T +L C I +
Sbjct: 280 DMGS--WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAML 337
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I+ G D +V AL++MYAK G +D K F +M + D+VSW +I AYEQ +
Sbjct: 338 IHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDD 397
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL-EDLCIQN 250
P A F K Q G D +T+VS+AS V Q D +++VHG+ + +L ED+ I N
Sbjct: 398 PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGN 457
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK- 309
++V MYA+ G ++ A VF+++ +D+ISWN+++TGY QNG ASEA+ ++ M+ +CK
Sbjct: 458 AVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME--ECKE 515
Query: 310 --PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN T + ++ A ++G+ Q G K HG +I +N+ +D + ++D+Y KCG L A
Sbjct: 516 IIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAM 575
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
++F + P E +V+ WN +I+ +G+HGH K L+ F +ML+EGVKPDH+TF S+LSACSH
Sbjct: 576 SLFYQV-PQESSVT-WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH 633
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
+G ++EG+ CF M + +KP +KHY CMVD+LGRAG L A+D IK MPL P+ S+WGA
Sbjct: 634 SGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGA 693
Query: 488 LLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACRIHG I A++ LF+++ ++ GY+VL+SNIYA KW V K+R + +GL
Sbjct: 694 LLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGL 753
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KK +S IE + + F+T ++ +P KE+Y+++ + ++K GY+PD S L DVE+
Sbjct: 754 KKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEE 813
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+++EH+L HSE+LA+AFGI++ P++ +++ KNLRVC DCH+A +FIS I +R+I+VRD
Sbjct: 814 DEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRD 873
Query: 663 ANRFHHFEGGTCSCNDYW 680
+NRFHHF+ G CSC DYW
Sbjct: 874 SNRFHHFKDGICSCGDYW 891
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 265/501 (52%), Gaps = 19/501 (3%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H+ L +G + Q++ + +++ Y G+ + +R F+ I Y+ WN+MI AY +
Sbjct: 138 LHALLVVAGKV-QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYA--WNSMISAYVH 194
Query: 88 NGHCVETLE-LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NGH E + Y + S I + YTFP VLKAC + +++G+ +H + GF + +
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LVDGRKIHCWAFKLGFQWNVF 251
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V A+L+ MY++ G T +FD+M RD+ SW MI+ Q +AL + + + EG
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ + VT+VS+ QLGD+ A +H Y I + DL + N+++ MYA+ GN+E AR
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
F M D++SWNS++ Y QN A F +MQ + +P+ +T + L S
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431
Query: 327 SRQLGRKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ R HG+I+ + D + NAV+DMYAK G LD+A +F I ++V SWN
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII--PVKDVISWNT 489
Query: 386 LIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
LI GY +G +A+E + M E + + P+ T+ SIL A +H G + +G K + K
Sbjct: 490 LITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT 549
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANY-L 503
++ +V C++D+ G+ G L +A + Q+P + W A++ IHG L
Sbjct: 550 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 504 F------QLEPEHTGYFVLMS 518
F ++P+H + L+S
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLS 629
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 184/394 (46%), Gaps = 18/394 (4%)
Query: 95 LELYSTMRRS--------GISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
++L+S R S G + F F+ + K +H ++ G + +
Sbjct: 96 IQLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPF---AKCLHALLVVAGKVQSIF 152
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL-ILFQKTQQE 205
+ LV++YA G FD++ +D+ +W MI+AY EA+ +Q
Sbjct: 153 ISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVS 212
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ D T V A G L D + +H +A F ++ + S++ MY+R G A
Sbjct: 213 EIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 269
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R +FD M RD+ SWN+M++G IQNG A++AL + DEM+ K N VT + ++ C L
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G H Y+I ++ D + NA+++MYAK G+L+ A F + ++ V SWN
Sbjct: 330 GDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITD--VVSWNS 387
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA-DMTKL 444
+IA Y + A FF +M G +PD +T S+ S + + R M +
Sbjct: 388 IIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
+ +V +VDM + G L A + + +P+
Sbjct: 448 WLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPV 481
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 285/678 (42%), Positives = 430/678 (63%), Gaps = 16/678 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C L R+IH G + + A +I Y+ +G ARSLF+ +
Sbjct: 221 FPPVLKACGTLVDGRRIHCWAFKLGF-QWNVFVAASLIHMYSRFGFTGIARSLFDDMPFR 279
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI NG+ + L++ MR GI N T +L C I +
Sbjct: 280 DMGS--WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAML 337
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I+ G D +V AL++MYAK G +D K F +M + D+VSW +I AYEQ +
Sbjct: 338 IHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDD 397
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL-EDLCIQN 250
P A F K Q G D +T+VS+AS V Q D +++VHG+ + +L ED+ I N
Sbjct: 398 PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGN 457
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK- 309
++V MYA+ G ++ A VF+++ +D+ISWN+++TGY QNG ASEA+ ++ M+ +CK
Sbjct: 458 AVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMME--ECKE 515
Query: 310 --PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN T + ++ A ++G+ Q G + HG +I +N+ +D + ++D+Y KCG L A
Sbjct: 516 IIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAM 575
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
++F + P E +V+ WN +I+ +G+HGH K L+ F +ML+EGVKPDH+TF S+LSACSH
Sbjct: 576 SLFYQV-PQESSVT-WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH 633
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
+G ++EG+ CF M + +KP +KHY CMVD+LGRAG L A+ IK MPL P+ S+WGA
Sbjct: 634 SGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGA 693
Query: 488 LLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACRIHG I A++ LF+++ ++ GY+VL+SNIYA KW V K+R + +GL
Sbjct: 694 LLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGL 753
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KK +S IE + + F+T ++ +P KE+Y+++ + ++K GY+PD S L DVE+
Sbjct: 754 KKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEE 813
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+++EH+L HSE+LA+AFGI++ P++ +++ KNLRVC DCH+A +FIS I +R+I+VRD
Sbjct: 814 DEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRD 873
Query: 663 ANRFHHFEGGTCSCNDYW 680
+NRFHHF+ G CSC DYW
Sbjct: 874 SNRFHHFKDGICSCGDYW 891
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 265/501 (52%), Gaps = 19/501 (3%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H+ L +G + Q++ + +++ Y G+ + +R F+ I Y+ WN+MI AY +
Sbjct: 138 LHALLVVAGKV-QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYT--WNSMISAYVH 194
Query: 88 NGHCVETLE-LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NGH E + Y + S I + YTFP VLKAC + +++G+ +H + GF + +
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LVDGRRIHCWAFKLGFQWNVF 251
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V A+L+ MY++ G T +FD+M RD+ SW MI+ Q +AL + + + EG
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ + VT+VS+ QLGD+ A +H Y I + DL + N+++ MYA+ GN+E AR
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
F M D++SWNS++ Y QN A F +MQ + +P+ +T + L S
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431
Query: 327 SRQLGRKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ R HG+I+ + D + NAV+DMYAK G LD+A +F I ++V SWN
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII--LVKDVISWNT 489
Query: 386 LIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
LI GY +G +A+E + M E + + P+ T+ SIL A +H G + +G + + K
Sbjct: 490 LITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKT 549
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANY-L 503
++ +V C++D+ G+ G L +A + Q+P + W A++ IHG L
Sbjct: 550 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 504 F------QLEPEHTGYFVLMS 518
F ++P+H + L+S
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLS 629
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 199/463 (42%), Gaps = 71/463 (15%)
Query: 95 LELYSTMRRS--------GISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
++L+S R S G + F F+ + K +H ++ G + +
Sbjct: 96 IQLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPF---AKCLHALLVVAGKVQSIF 152
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL-ILFQKTQQE 205
+ LV++YA G FD++ +D+ +W MI+AY EA+ +Q
Sbjct: 153 ISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVS 212
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ D T V A G L D + +H +A F ++ + S++ MY+R G A
Sbjct: 213 EIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 269
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R +FD M RD+ SWN+M++G IQNG A++AL + DEM+ K N VT + ++ C L
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G H Y+I ++ D + NA+++MYAK G+L+ A F + ++ V SWN
Sbjct: 330 GDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITD--VVSWNS 387
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA----------------- 428
+IA Y + A FF +M G +PD +T S+ S + +
Sbjct: 388 IIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447
Query: 429 -------------------GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
GL+D K F ++ + +V + ++ + G EA
Sbjct: 448 WLMEDVVIGNAVVDMYAKLGLLDSAHKVF----EIILVKDVISWNTLITGYAQNGLASEA 503
Query: 470 FDMIKQM----PLPPNDSVW----------GALLLACRIHGEI 498
++ K M + PN W GAL RIHG +
Sbjct: 504 IEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRV 546
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 284/667 (42%), Positives = 430/667 (64%), Gaps = 20/667 (2%)
Query: 29 HSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANN 88
H++ SG ++ + A +++ PN +LFN + DK+ F WN++I A +
Sbjct: 74 HTAFQFSGF-SKRRSICAGAVLRRRYSNNPNLT-TLFNK-YVDKTNVFSWNSVIAELARS 130
Query: 89 GHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQ 148
G VE L +S+MR+ + N TFP +K+C++ + G+ H + GF D +V
Sbjct: 131 GDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVS 190
Query: 149 AALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF-----QKTQ 203
+ALVDMY+KCG+ D +FDE+S R++VSWT MIT Y Q + AL+LF +++
Sbjct: 191 SALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESG 250
Query: 204 QEG---LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
EG + D + +VSV SA ++ + + VHG+ I F DL ++N+++ YA+CG
Sbjct: 251 SEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCG 310
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILV 319
+ +R VFD M +RD+ISWNS++ Y QNG ++E++ +F M ++ + N VT ++
Sbjct: 311 ELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVL 370
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC + GS++LG+ H +I ++ + + +++DMY KCG ++ A F+ + E+N
Sbjct: 371 LACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR--EKN 428
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SW+ ++AGYGMHGH ++ALE F +M GVKP++ITF S+L+ACSHAGL++EG F
Sbjct: 429 VKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFK 488
Query: 440 DMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--- 495
M+ + V+P V+HY CMVD+LGRAG L EAFD+IK M L P+ VWGALL ACR+H
Sbjct: 489 AMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNV 548
Query: 496 --GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
GEI+A LF+L+P++ GY+VL+SNIYA + +W +V ++R MKN GL KP FS+++
Sbjct: 549 DLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDI 608
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F DR +P +++Y+ +E ++++++ GY+PD++ LHDV E++E +L HS
Sbjct: 609 KGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHS 668
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLAVAFGIMN P + + KNLRVC DCH+A +FIS I R+I+VRD+ RFHHF G
Sbjct: 669 EKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGL 728
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 729 CSCGDYW 735
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 284/676 (42%), Positives = 431/676 (63%), Gaps = 12/676 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C L R+IH + G + + A +I Y+ +G ARSLF+ +
Sbjct: 178 FPPVLKACQTLVDGRKIHCWVFKLGF-QWDVFVAASLIHMYSRFGFVGIARSLFDDMPFR 236
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI NG+ + L++ MR GI+ +S T +L CA I +
Sbjct: 237 DMGS--WNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATL 294
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I+ G + +V AL++MYAK G D KVF +M +RD+VSW +I AYEQ +
Sbjct: 295 IHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDD 354
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL-EDLCIQN 250
P A F K Q GL D +T+VS+AS Q D +++VHG+ + +L E + I N
Sbjct: 355 PVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGN 414
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SDCK 309
+++ MYA+ G ++ A VF+++ +D++SWN++++GY QNG ASEA+ ++ M+ + K
Sbjct: 415 AVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIK 474
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N T + +++A ++G+ Q G + HG++I +N+ +D + ++D+Y KCG L A +
Sbjct: 475 LNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCL 534
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F + P E +V WN +I+ +G+HGHG KAL+ F +M +EGVKPDH+TF S+LSACSH+G
Sbjct: 535 FYQV-PRESSVP-WNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSG 592
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
L+DEG+ F M + +KP +KHY CMVD+LGRAG L A+D IK MPL P+ S+WGALL
Sbjct: 593 LVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALL 652
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACRIHG I A++ LF+++ E+ GY+VL+SNIYA KW V K+R + +GLKK
Sbjct: 653 GACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKK 712
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
+S IE + + F+T ++ +P KE+Y ++ + ++K GY+PD S L DVE+++
Sbjct: 713 TPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDE 772
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+EH+L HSE+LA+AFGI++ P++ +++ KNLRVC DCH+A +FIS I R+I+VRD+
Sbjct: 773 KEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSK 832
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF+ G CSC DYW
Sbjct: 833 RFHHFKNGICSCGDYW 848
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 282/527 (53%), Gaps = 19/527 (3%)
Query: 2 RRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTA 61
R+ + E ++ L SC +++H+ L SG I Q+ + +++ Y + G+ + +
Sbjct: 69 RQPAKNEEIDFNSLFDSCTKTLLAKRLHALLVVSGKI-QSNFISIRLVNLYASLGDVSLS 127
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLE-LYSTMRRSGISSNSYTFPFVLKAC 120
R F+ I Y+ WN+MI AY NGH E ++ Y + + ++ YTFP VLKAC
Sbjct: 128 RGTFDQIQRKDVYT--WNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC 185
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ +++G+ +H + + GF D +V A+L+ MY++ G +FD+M RD+ SW
Sbjct: 186 QT---LVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWN 242
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI+ Q +AL + + + EG+ DSVT+ S+ QLGD+ A +H Y I +
Sbjct: 243 AMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKH 302
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+L + N+++ MYA+ GN+ A+ VF M RD++SWNS++ Y QN A F
Sbjct: 303 GLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFF 362
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA-TLRNAVMDMYAK 359
+MQ + +P+ +T + L S + R HG+I+ ++A + NAVMDMYAK
Sbjct: 363 FKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAK 422
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITF 418
G +D+A +FN I ++V SWN LI+GY +G +A+E + M E +K + T+
Sbjct: 423 LGVIDSAHKVFNLI--PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTW 480
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
SIL+A +H G + +G + + K ++ +V C++D+ G+ G L +A + Q+P
Sbjct: 481 VSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVP- 539
Query: 479 PPNDSVWGALLLACRIHGE-IAANYLFQ------LEPEHTGYFVLMS 518
+ W A++ IHG A LF+ ++P+H + L+S
Sbjct: 540 RESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLS 586
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/705 (39%), Positives = 434/705 (61%), Gaps = 43/705 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI-IIKYTTYGEPNTARSLFNSIHNDKS 73
LL +C +L+QIHS + +GL N L I + +G + A LF SI ++
Sbjct: 38 LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESI--EQP 95
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F+WNTMIR + + V ++ Y M G+ NSYTFPF+LK+CA EGK +H
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQT-------------------------------D 162
G +++ G SD +V +L++MYA+ G+ D
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
D ++F+E+ VRD VSW MI Y Q+ + EEAL FQ+ ++ + + T+V+V SA
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
Q G + V + + +L + N+++ MY++CG+++KAR +F+ + ++D+ISWN
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ GY EAL LF +MQ S+ +PN VT + ++ AC YLG+ LG+ H YI
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF 395
Query: 343 MKI-DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + + +L +++DMYAKCG+++ A+ +F + P +++ SWN +I+G MHGH ALE
Sbjct: 396 LGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKP--KSLGSWNAMISGLAMHGHANMALE 453
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
F QM +EG +PD ITF +LSACSHAGL++ GR+CF+ M + + P+++HY CM+D+L
Sbjct: 454 LFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLL 513
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFV 515
GRAG EA ++K M + P+ ++WG+LL ACR+HG E AA +LF+LEPE+ G +V
Sbjct: 514 GRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYV 573
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNIYA + +W +V ++R + +KG+KK S IE + F D+V+ +++YK
Sbjct: 574 LLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYK 633
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
++ + ++ AG++PD S L+D+++E +E L++HSEKLA+AFG+++ PE +++ K
Sbjct: 634 MLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVK 693
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLRVC +CHSA + IS I+ R+II RD NRFHHF+ G+CSC DYW
Sbjct: 694 NLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 283/678 (41%), Positives = 424/678 (62%), Gaps = 18/678 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C + +IH G + +++ A +I Y YG AR LF+ +
Sbjct: 156 FPSVLKACRNVTDGNKIHCLALKFGFM-WDVYVAASLIHLYCRYGAVVNARILFDEMPTR 214
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y +G+ E L L +R + +S T +L AC G
Sbjct: 215 DMGS--WNAMISGYCQSGNAKEALTLSDGLR----AMDSVTVVSLLSACTEAGDFNRGVT 268
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ G S+ +V L+D+YA+ G D KVFD M VRDL+SW +I AYE E+
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA-FLEDLCIQN 250
P A++LFQ+ + + D +T++S+AS + QLG++ ++V G+ + FLED+ I N
Sbjct: 329 PLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD--EMQNSDC 308
++V MYA+ G V+ AR VF+ + +D+ISWN++++GY QNG ASEA+ +++ E + +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEI 448
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
N T + ++ AC+ G+ + G K HG ++ + + +D + ++ DMY KCG LD A +
Sbjct: 449 SANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALS 508
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F I N WN LIA +G HGHG KA+ F +ML+EGVKPDHITF ++LSACSH+
Sbjct: 509 LFYQI--PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 566
Query: 429 GLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+DEG CF M T + P +KHY CMVD+ GRAG L A + IK MPL P+ S+WGA
Sbjct: 567 GLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGA 626
Query: 488 LLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACR+HG +IA+ +LF++EPEH GY VL+SN+YA++ KW V ++R KGL
Sbjct: 627 LLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGL 686
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
+K +S +E ++ F+T ++ +P ++E+Y+++ ++ ++KM GY+PD L DVED
Sbjct: 687 RKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVED 746
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+++EH+L HSE+LA+AF ++ + +++ KNLRVC DCHS +FIS I R+IIVRD
Sbjct: 747 DEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRD 806
Query: 663 ANRFHHFEGGTCSCNDYW 680
+NRFHHF+ G CSC DYW
Sbjct: 807 SNRFHHFKNGVCSCGDYW 824
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 278/518 (53%), Gaps = 30/518 (5%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L + C L S + +H+ L S I Q + + AK++ Y G AR F+ IHN Y
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSNAI-QNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVY 118
Query: 75 SFLWNTMIRAYANNGHCVETLELYST-MRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ WN MI Y G+ E + +S M SG+ + TFP VLKAC + + +G +H
Sbjct: 119 A--WNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIH 173
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
++ GF+ D YV A+L+ +Y + G + +FDEM RD+ SW MI+ Y Q+ +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAK 233
Query: 194 EALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EAL L +GL + DSVT+VS+ SA + GD + +H Y+I + +L + N +
Sbjct: 234 EALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ +YA G+++ + VFD M RDLISWNS++ Y N Q A+LLF EM+ S +P+
Sbjct: 289 IDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDC 348
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENMFN 371
+T + L S + LG + R G+ + + D T+ NAV+ MYAK G +D+A +FN
Sbjct: 349 LTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG--VKPDHITFTSILSACSHAG 429
+ ++V SWN +I+GY +G +A+E ++ M EEG + + T+ S+L ACS AG
Sbjct: 409 WL--PNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAG 466
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ +G K + K + +V + DM G+ G L +A + Q+P N W L
Sbjct: 467 ALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNT-L 524
Query: 490 LAC---RIHGEIAANYLFQ------LEPEHTGYFVLMS 518
+AC HGE A LF+ ++P+H + L+S
Sbjct: 525 IACHGFHGHGEKAV-MLFKEMLDEGVKPDHITFVTLLS 561
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 282/677 (41%), Positives = 423/677 (62%), Gaps = 17/677 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C + +IH G + +++ A +I Y+ Y AR LF+ +
Sbjct: 156 FPSVLKACRTVIDGNKIHCLALKFGFM-WDVYVAASLIHLYSRYKAVGNARILFDEMPVR 214
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y +G+ E L L + +R + +S T +L AC G
Sbjct: 215 DMGS--WNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVT 268
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ G S+ +V L+D+YA+ G+ D KVFD M VRDL+SW +I AYE E+
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA-FLEDLCIQN 250
P A+ LFQ+ + + D +T++S+AS + QLGD+ ++V G+ + FLED+ I N
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SDCK 309
++V MYA+ G V+ AR VF+ + D+ISWN++++GY QNG ASEA+ +++ M+ +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N T + ++ AC+ G+ + G K HG ++ + + +D + ++ DMY KCG L+ A ++
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F I N WN LIA +G HGHG KA+ F +ML+EGVKPDHITF ++LSACSH+G
Sbjct: 509 FYQI--PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Query: 430 LIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+DEG+ CF M T + P +KHY CMVDM GRAG L A IK M L P+ S+WGAL
Sbjct: 567 LVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGAL 626
Query: 489 LLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L ACR+HG +IA+ +LF++EPEH GY VL+SN+YA++ KW V ++R KGL+
Sbjct: 627 LSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLR 686
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K +S +E ++ F+T ++ +P ++E+Y+++ ++ ++KM GY+PD L DVED+
Sbjct: 687 KTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDD 746
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
++EH+L HSE+LA+AF ++ + +++ KNLRVC DCHS +FIS I R+IIVRD+
Sbjct: 747 EKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDS 806
Query: 664 NRFHHFEGGTCSCNDYW 680
NRFHHF+ G CSC DYW
Sbjct: 807 NRFHHFKNGVCSCGDYW 823
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 275/517 (53%), Gaps = 29/517 (5%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L + C L S + +H+ L S I Q + + AK++ Y G AR F+ I N Y
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQI-QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 75 SFLWNTMIRAYANNGHCVETLELYST-MRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ WN MI Y G+ E + +S M SG++ + TFP VLKAC + +++G +H
Sbjct: 119 A--WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIH 173
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
++ GF+ D YV A+L+ +Y++ + +FDEM VRD+ SW MI+ Y Q+ +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 194 EALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EAL L GL + DSVT+VS+ SA + GD + +H Y+I + +L + N +
Sbjct: 234 EALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ +YA G + + VFD M RDLISWNS++ Y N Q A+ LF EM+ S +P+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENMFN 371
+T + L S + LG + R G+ + + D T+ NAV+ MYAK G +D+A +FN
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGL 430
+ +V SWN +I+GY +G +A+E ++ M EEG + + T+ S+L ACS AG
Sbjct: 409 WL--PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+ +G K + K + +V + DM G+ G L +A + Q+P N W L+
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNT-LI 524
Query: 491 AC---RIHGEIAANYLFQ------LEPEHTGYFVLMS 518
AC HGE A LF+ ++P+H + L+S
Sbjct: 525 ACHGFHGHGEKAV-MLFKEMLDEGVKPDHITFVTLLS 560
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 276/677 (40%), Positives = 436/677 (64%), Gaps = 13/677 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ ++++C L R++H + G +++ A I Y+ +G + A +LF+++
Sbjct: 145 FPPVIRACGNLDDGRKVHCLVLKLGF-ECDVYIAASFIHFYSRFGFVSLACNLFDNMMIR 203
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ WN MI + NG E LE++ MR +S +S T +L C I+ G +
Sbjct: 204 DIGT--WNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVL 261
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ G D +V AL++MYAK G+ +F++M VRD+VSW ++ A+EQ +K
Sbjct: 262 IHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKK 321
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA-FLEDLCIQN 250
P AL ++ K G++ D +T+VS+AS +LG+ L ++++HG+ FL D+ + N
Sbjct: 322 PVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGN 381
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SDCK 309
+I+ MYA+ G ++ AR VF+ + +D+ISWNS++TGY QNG A+EA+ ++ M+ S
Sbjct: 382 AIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAV 441
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN T + +++A + LG+ + G K HG +I + + D + ++DMY KCG L A ++
Sbjct: 442 PNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSL 501
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F ++ P + +VS WN +I+ +G+HG+G KA++ F +M EGVKPDHITF S+LSACSH+G
Sbjct: 502 FYEV-PHQSSVS-WNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSG 559
Query: 430 LIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+DEG+ CF M + ++P +KHY CMVD+ GRAG L +AF+ +K MP+ P+ SVWGAL
Sbjct: 560 LVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGAL 619
Query: 489 LLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L ACRIH + +++L ++E E+ GY+VL+SNIYA W V ++R +++GLK
Sbjct: 620 LGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLK 679
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K +S IE K I F+T ++ +P +E+Y ++ ++ ++K GY+PD + L DVED+
Sbjct: 680 KTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDD 739
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
++E++L HSE+LA+AFGI++ P+ +Q+ KNLRVC DCH+A +FIS I R+IIVRD+
Sbjct: 740 EKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDS 799
Query: 664 NRFHHFEGGTCSCNDYW 680
NRFHHF+ G CSC DYW
Sbjct: 800 NRFHHFKDGVCSCGDYW 816
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/517 (31%), Positives = 279/517 (53%), Gaps = 19/517 (3%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++++ C + +Q+H+ L SG Q++ L AK+I +Y G+ AR F+ I
Sbjct: 46 FNRIFLYCTKVHLAKQLHALLVVSGK-TQSIFLSAKLINRYAFLGDIPHARLTFDQIQTK 104
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYST-MRRSGISSNSYTFPFVLKACASNSLILEGK 130
Y+ WN+MI AYA GH ++ ++ + S + S+ YTFP V++AC + + +G+
Sbjct: 105 DVYT--WNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGR 159
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
VH +++ GF D Y+ A+ + Y++ G C +FD M +RD+ +W MI+ +
Sbjct: 160 KVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNG 219
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
K EAL +F + + + + DSVTI S+ QL D++ +H YAI DL + N
Sbjct: 220 KVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCN 279
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ MYA+ G + A +F+ M+ RD++SWNS+L + QN + AL ++++M + P
Sbjct: 280 ALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVP 339
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENM 369
+ +T + L S LG+ R HG++ + D L NA++DMYAK G +D+A +
Sbjct: 340 DLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKV 399
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM-LEEGVKPDHITFTSILSACSHA 428
F + ++V SWN LI GY +G +A++ +S M G P+ T+ SIL+A S
Sbjct: 400 FEGL--PVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQL 457
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
G + +G K + K + ++ C+VDM G+ G L +A + ++P + S W A+
Sbjct: 458 GALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAI 516
Query: 489 LLACRIHG-EIAANYLFQ------LEPEHTGYFVLMS 518
+ +HG + A LF+ ++P+H + L+S
Sbjct: 517 ISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLS 553
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/673 (39%), Positives = 430/673 (63%), Gaps = 13/673 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C L +++H + G + + A ++ Y+ YG + A +F +
Sbjct: 127 FPPILKACVSLVDGKKVHCCVFKMGFEDDVF-VAASLVHLYSRYGVLDVAHKVFVDMPVK 185
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI + NG+ L + + M+ G+ ++ T +L CA + ++ G +
Sbjct: 186 DVGS--WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVL 243
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +++ G SD +V AL++MY+K G+ D VFD+M VRDLVSW +I AYEQ
Sbjct: 244 IHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNND 303
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQN 250
P AL F+ Q G+ D +T+VS+ S QL D ++++ G+ I +L+ D+ I N
Sbjct: 304 PSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGN 363
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SDCK 309
++V MYA+ G + A VFD + ++D ISWN+++TGY QNG ASEA+ ++ M+ D
Sbjct: 364 ALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI 423
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN T + ++ A +++G+ Q G K H +I +++ +D + ++D+Y KCG L+ A ++
Sbjct: 424 PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSL 483
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F +I P + +V WN +IA G+HG G +AL+ F ML E VK DHITF S+LSACSH+G
Sbjct: 484 FYEI-PRDTSVP-WNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSG 541
Query: 430 LIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+DEG+KCF M K +KP +KHY CMVD+LGRAG L +A+++++ MP+ P+ S+WGAL
Sbjct: 542 LVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGAL 601
Query: 489 LLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L AC+I+G +A++ L +++ E+ GY+VL+SNIYA + KW V K+R +++GL+
Sbjct: 602 LSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLR 661
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K +S + G + F+T ++ +P + E+YK+++ ++ ++K GY+PD S D+E++
Sbjct: 662 KTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEED 721
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
++E +LN HSE+LA+AFGI++ P + +++ KNLRVC DCH+A ++IS I R+I+VRD+
Sbjct: 722 EKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDS 781
Query: 664 NRFHHFEGGTCSC 676
NRFHHF+ G CSC
Sbjct: 782 NRFHHFKDGICSC 794
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 272/493 (55%), Gaps = 17/493 (3%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ L SC + + +++H+ L G +Q + L K+I Y T+G+ + +RS F+ IH
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGK-SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKK 83
Query: 72 KSYSFLWNTMIRAYANNGHCVETL----ELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+S WN++I AY G E + +L+S + + YTFP +LKAC S ++
Sbjct: 84 NIFS--WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LV 138
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+GK VH + + GF D +V A+LV +Y++ G D KVF +M V+D+ SW MI+ +
Sbjct: 139 DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q AL + + + EG+ D++T+ S+ Q DV+ +H + + + D+
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVF 258
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N+++ MY++ G ++ A++VFD ME RDL+SWNS++ Y QN S AL F MQ
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG 318
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTA 366
+P+ +T + L S + L +++ R G++I + D + NA+++MYAK G ++ A
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSAC 425
+F+ + ++ SWN L+ GY +G +A++ ++ M E P+ T+ SI+ A
Sbjct: 379 HTVFDQL--PRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAY 436
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV- 484
SH G + +G K A + K S+ +V C++D+ G+ G L +A + + +P + SV
Sbjct: 437 SHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE--IPRDTSVP 494
Query: 485 WGALLLACRIHGE 497
W A++ + IHG
Sbjct: 495 WNAIIASLGIHGR 507
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 274/683 (40%), Positives = 419/683 (61%), Gaps = 14/683 (2%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
G + F+ LL L QIH+ L SGL+ L K + GE AR +
Sbjct: 67 GFDFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGF-LVTKFVNASWNIGEIGYARKV 125
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + FLWN +IR Y+++ + +E+YS M+ SG++ + +T P VLKAC+
Sbjct: 126 FDEF--PEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVP 183
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
++ GK VHG I R GF SD +VQ LV +YAKCG+ + VF+ + R++VSWT MI+
Sbjct: 184 VLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMIS 243
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA--F 242
Y Q P EAL +F + +Q + D + +VSV A + D+ + +++HG + F
Sbjct: 244 GYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEF 303
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
DL I S+ AMYA+CG V AR FD ME +++ WN+M++GY +NG +EA+ LF E
Sbjct: 304 EPDLLI--SLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQE 361
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M + + + + +T + AC +GS L + YI + + D + A++DM+AKCG
Sbjct: 362 MISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGS 421
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
+D A +F+ +++V W+ +I GYG+HG G+ A++ F M + GV P+ +TF +L
Sbjct: 422 VDLAREVFD--RTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLL 479
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
+AC+H+GL++EG + F M ++ +HYAC+VD+LGR+G L EA+D I MP+ P
Sbjct: 480 TACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGV 539
Query: 483 SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
SVWGALL AC+I+ GE AA LF L+P +TG++V +SN+YA+S W V K+R M
Sbjct: 540 SVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILM 599
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
+ KGL K +S+IE +Q F D+ +P +KE+++++ES+ +K AG++P + L
Sbjct: 600 REKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVL 659
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
HD+ E++E L HSE+LA+A+G+++ P +++TKNLR C +CHSA + IS + R+
Sbjct: 660 HDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVNRE 719
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I+VRDANRFHHF+ G CSC DYW
Sbjct: 720 IVVRDANRFHHFKNGVCSCRDYW 742
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/625 (41%), Positives = 404/625 (64%), Gaps = 17/625 (2%)
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
DKS WN++I A G VE L +S++R+ G+ +FP +K+C++ ++ G+
Sbjct: 1103 DKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGR 1162
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+ H GF +D +V +AL+DMY+KCGQ D +FDE+ +R++VSWT MIT Y Q E
Sbjct: 1163 MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNE 1222
Query: 191 KPEEALILFQKTQQE--------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
+ + AL+LF+ +E + DSV +VSV SA ++ + VHG+ + F
Sbjct: 1223 QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF 1282
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+ + N+++ YA+CG ++ VFD ME++D ISWNSM+ Y Q+G + EAL +F
Sbjct: 1283 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 1342
Query: 303 M-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
M ++ + N VT ++ AC + G+ + G+ H +I +++ + + +++DMY KCG
Sbjct: 1343 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 1402
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
++ A+ F+ + E+NV SW ++AGYGMHG ++AL+ F +M+ GVKP++ITF S+
Sbjct: 1403 RVEMAKKTFDRM--KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 1460
Query: 422 LSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L+ACSHAGL++EG F M K ++P ++HY CMVD+ GRAGCL EA+++IK+M + P
Sbjct: 1461 LAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP 1520
Query: 481 NDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ VWG+LL ACRIH GEIAA LF+L+P++ GY+VL+SN+YA + +W +V ++R
Sbjct: 1521 DFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRM 1580
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
MKN+ L KP FS++E + F D+ +P+ + +YK +E + +E++ GY+P+++
Sbjct: 1581 LMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTS 1640
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
LHDV++E++E +L HSEKLAVAFG+MN P + + KNLRVC DCH+ + IS +
Sbjct: 1641 VLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVH 1700
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R +VRD+ RFHHF+ G CSC DYW
Sbjct: 1701 RDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 191/348 (54%), Gaps = 34/348 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL++C LRQIH+ + SGL N L L K+I Y+T+G A LF I N
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGLSNDQL-LTRKLIHLYSTHGRIAYAILLFYQIQN--PC 89
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+F WN +IRA NG + L LY M GI+++ +TFPFV+KAC + I GKVVHG
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV------------- 181
+I+ GF D +VQ L+D Y KCG T KVF++M VR++VSWT
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 182 ------------------MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
MI Y + ++PEEAL LF++ Q E + + T+VS+ A +
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+G + + +H YAI N + + +++ MY++CG+++ A VF+ M ++ L +WNSM
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+T +G EAL LF EM+ + KP+ +T + ++ AC ++ + + G
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 198/394 (50%), Gaps = 37/394 (9%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
F+L+ C + + + +H IIR+G +D + L+ +Y+ G+ +F ++
Sbjct: 32 FLLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+W ++I A E+AL+L++ +G+ +D T V A + + VH
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCG-------------------------------NVE 263
G I F D+ +QN+++ Y +CG +++
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+AR +FD + ++++SW +M+ GYI+N Q EAL LF MQ + PN T + L+ ACT
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+G LGR H Y I + ++I L A++DMY+KCG + A +F + +++ +W
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETM--PRKSLPTW 326
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I G+HG G++AL FS+M VKPD ITF +L AC H + EG F MT+
Sbjct: 327 NSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQ 386
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ P +HY CM ++ R+ L EAF K++
Sbjct: 387 HYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H I + D + ++ +Y+ G + A L+F ++ +WN ++ N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G + +AL+L+ M + T ++ ACT S LG+ HG +I D ++
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 351 NAVMDMYAK-------------------------------CGDLDTAENMFNDIHPSERN 379
N ++D Y K CGDL A +F++I PS +N
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI-PS-KN 221
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SW +I GY + +ALE F +M E + P+ T S++ AC+ G++ GR
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP---LPPNDSVWGALLLACRIH- 495
K ++ V ++DM + G + +A ++ + MP LP W +++ + +H
Sbjct: 282 YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP----TWNSMITSLGVHG 337
Query: 496 -GEIAANYLFQLE 507
G+ A N ++E
Sbjct: 338 LGQEALNLFSEME 350
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I + G+ AR +F+ I + S W MI Y N E LEL+ M+ I
Sbjct: 197 VISGLISCGDLQEARRIFDEIPSKNVVS--WTAMINGYIRNQQPEEALELFKRMQAENIF 254
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N YT ++KAC ++ G+ +H I+ Y+ AL+DMY+KCG D +V
Sbjct: 255 PNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEV 314
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F+ M + L +W MIT+ +EAL LF + ++ + D++T + V A + +V
Sbjct: 315 FETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNV 374
Query: 228 LKAQA-----VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ A Y I C+ +YAR N+++A
Sbjct: 375 KEGCAYFTRMTQHYGIAPIPEHYECMTE----LYARSNNLDEA 413
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A + ++K ++ SWNS++ + G + EAL F ++ P + + +C+
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L GR H + D + +A++DMY+KCG L A +F++I RNV SW
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI--PLRNVVSWT 1212
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEE--------GVKPDHITFTSILSACS 426
+I GY + AL F LEE V D + S+LSACS
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 1262
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/625 (41%), Positives = 404/625 (64%), Gaps = 17/625 (2%)
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
DKS WN++I A G VE L +S++R+ G+ +FP +K+C++ ++ G+
Sbjct: 1976 DKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGR 2035
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+ H GF +D +V +AL+DMY+KCGQ D +FDE+ +R++VSWT MIT Y Q E
Sbjct: 2036 MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNE 2095
Query: 191 KPEEALILFQKTQQE--------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
+ + AL+LF+ +E + DSV +VSV SA ++ + VHG+ + F
Sbjct: 2096 QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF 2155
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+ + N+++ YA+CG ++ VFD ME++D ISWNSM+ Y Q+G + EAL +F
Sbjct: 2156 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 2215
Query: 303 M-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
M ++ + N VT ++ AC + G+ + G+ H +I +++ + + +++DMY KCG
Sbjct: 2216 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 2275
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
++ A+ F+ + E+NV SW ++AGYGMHG ++AL+ F +M+ GVKP++ITF S+
Sbjct: 2276 RVEMAKKTFDRM--KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 2333
Query: 422 LSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L+ACSHAGL++EG F M K ++P ++HY CMVD+ GRAGCL EA+++IK+M + P
Sbjct: 2334 LAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP 2393
Query: 481 NDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ VWG+LL ACRIH GEIAA LF+L+P++ GY+VL+SN+YA + +W +V ++R
Sbjct: 2394 DFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRM 2453
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
MKN+ L KP FS++E + F D+ +P+ + +YK +E + +E++ GY+P+++
Sbjct: 2454 LMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTS 2513
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
LHDV++E++E +L HSEKLAVAFG+MN P + + KNLRVC DCH+ + IS +
Sbjct: 2514 VLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVH 2573
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R +VRD+ RFHHF+ G CSC DYW
Sbjct: 2574 RDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 191/348 (54%), Gaps = 34/348 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL++C LRQIH+ + SGL N L L K+I Y+T+G A LF I N
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGLSNDQL-LTRKLIHLYSTHGRIAYAILLFYQIQN--PC 89
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+F WN +IRA NG + L LY M GI+++ +TFPFV+KAC + I GKVVHG
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV------------- 181
+I+ GF D +VQ L+D Y KCG T KVF++M VR++VSWT
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 182 ------------------MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
MI Y + ++PEEAL LF++ Q E + + T+VS+ A +
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+G + + +H YAI N + + +++ MY++CG+++ A VF+ M ++ L +WNSM
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+T +G EAL LF EM+ + KP+ +T + ++ AC ++ + + G
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 198/394 (50%), Gaps = 37/394 (9%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
F+L+ C + + + +H IIR+G +D + L+ +Y+ G+ +F ++
Sbjct: 32 FLLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+W ++I A E+AL+L++ +G+ +D T V A + + VH
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCG-------------------------------NVE 263
G I F D+ +QN+++ Y +CG +++
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+AR +FD + ++++SW +M+ GYI+N Q EAL LF MQ + PN T + L+ ACT
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+G LGR H Y I + ++I L A++DMY+KCG + A +F + +++ +W
Sbjct: 269 EMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETM--PRKSLPTW 326
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I G+HG G++AL FS+M VKPD ITF +L AC H + EG F MT+
Sbjct: 327 NSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQ 386
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ P +HY CM ++ R+ L EAF K++
Sbjct: 387 HYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H I + D + ++ +Y+ G + A L+F ++ +WN ++ N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G + +AL+L+ M + T ++ ACT S LG+ HG +I D ++
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 351 NAVMDMYAK-------------------------------CGDLDTAENMFNDIHPSERN 379
N ++D Y K CGDL A +F++I PS +N
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI-PS-KN 221
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SW +I GY + +ALE F +M E + P+ T S++ AC+ G++ GR
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP---LPPNDSVWGALLLACRIH- 495
K ++ V ++DM + G + +A ++ + MP LP W +++ + +H
Sbjct: 282 YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP----TWNSMITSLGVHG 337
Query: 496 -GEIAANYLFQLE 507
G+ A N ++E
Sbjct: 338 LGQEALNLFSEME 350
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF 115
G+ AR +F+ I + S W MI Y N E LEL+ M+ I N YT
Sbjct: 205 GDLQEARRIFDEIPSKNVVS--WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVS 262
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
++KAC ++ G+ +H I+ Y+ AL+DMY+KCG D +VF+ M +
Sbjct: 263 LIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS 322
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA--- 232
L +W MIT+ +EAL LF + ++ + D++T + V A + +V + A
Sbjct: 323 LPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFT 382
Query: 233 --VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
Y I C + +YAR N+++A
Sbjct: 383 RMTQHYGIAPIPEHYEC----MTELYARSNNLDEA 413
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A + ++K ++ SWNS++ + G + EAL F ++ P + + +C+
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L GR H + D + +A++DMY+KCG L A +F++I RNV SW
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI--PLRNVVSWT 2085
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEE--------GVKPDHITFTSILSACSHA 428
+I GY + AL F LEE V D + S+LSACS
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 2137
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/677 (39%), Positives = 417/677 (61%), Gaps = 19/677 (2%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGL-----INQALHLGAKIIIKYTTYGEPNTARSLFNSIH 69
+L+ C + L +IH+ L + L + + L A I++ + + A S+F I
Sbjct: 30 ILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSM----DYAVSIFRQI- 84
Query: 70 NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
D+ S +N MIR + E + L+ M + + + +TFP +LK C+ + EG
Sbjct: 85 -DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEG 143
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ +H I++ GF S +V+ L+ MYA CG+ + +VFDEMS R++ +W M Y ++
Sbjct: 144 EQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKS 203
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
EE + LF + + + D VT+VSV +A G+L D+ + ++ Y + +
Sbjct: 204 GNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLI 263
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
S+V MYA+CG V+ AR +FD M++RD+++W++M++GY Q + EAL LF EMQ ++
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANID 323
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN +T + ++S+C LG+ + G+ H +I MK+ TL A+MD YAKCG ++++ +
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F + +NV SW VLI G +G G+KALE+F MLE+ V+P+ +TF +LSACSHAG
Sbjct: 384 FGKM--PVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAG 441
Query: 430 LIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+DEGR F M++ ++P ++HY CMVD+LGRAG + EAF IK MP+ PN +W L
Sbjct: 442 LVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTL 501
Query: 489 LLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L +C++H GE + L LEP H+G ++L+SNIYA+ +W + K+R +MK KG+K
Sbjct: 502 LASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIK 561
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K S+IE I F D V+ +E+Y +E M +IK AGY+P+ + A D E++
Sbjct: 562 KTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEED 621
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
D+E +++HSEKLA+AFG++ P +++TKNLRVC DCH+A + +S ++ R+I+VRD
Sbjct: 622 DKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDR 681
Query: 664 NRFHHFEGGTCSCNDYW 680
RFHHF+ G+CSCNDYW
Sbjct: 682 TRFHHFKEGSCSCNDYW 698
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 275/677 (40%), Positives = 427/677 (63%), Gaps = 13/677 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C LA ++H + G +++ A +I Y+ +G A +F +
Sbjct: 153 FPPVLKACLSLADGEKMHCWVLKMGF-EHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR 211
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI + NG+ E L + M+ + ++ T +L CA ++ ++ G +
Sbjct: 212 DVGS--WNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVL 269
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH +I+ G SD +V AL++MY+K G+ D +VFD M VRDLVSW +I AYEQ +
Sbjct: 270 VHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDD 329
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQN 250
P AL F++ G+ D +T+VS+AS GQL D +AVHG+ + +LE D+ I N
Sbjct: 330 PVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGN 389
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS-DCK 309
++V MYA+ G+++ AR VF+ + RD+ISWN+++TGY QNG ASEA+ ++ M+
Sbjct: 390 ALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIV 449
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN T + ++ A +++G+ Q G K HG +I + + +D + ++DMY KCG L+ A ++
Sbjct: 450 PNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSL 509
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F +I P E +V WN +I+ G+HGHG KAL+ F M +GVK DHITF S+LSACSH+G
Sbjct: 510 FYEI-PQETSVP-WNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSG 567
Query: 430 LIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+DE + CF M K +KP +KHY CMVD+ GRAG L +A++++ MP+ + S+WG L
Sbjct: 568 LVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTL 627
Query: 489 LLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L ACRIHG A++ L +++ E+ GY+VL+SNIYA KW K+R +++GL+
Sbjct: 628 LAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLR 687
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K +S + G ++ F+ ++ +P E+Y+++ + ++K GY+PD S L DVE++
Sbjct: 688 KTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEED 747
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
++E +L HSE+LA+ FGI++ P++ +++ KNLRVC DCH+A ++IS I R+IIVRD+
Sbjct: 748 EKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDS 807
Query: 664 NRFHHFEGGTCSCNDYW 680
NRFHHF+ G CSC DYW
Sbjct: 808 NRFHHFKDGICSCGDYW 824
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 160/489 (32%), Positives = 271/489 (55%), Gaps = 14/489 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ + +SC + +Q+H+ L G Q + L +++ Y T G+ + + + F I
Sbjct: 54 FNLVFRSCTNINVAKQLHALLLVLGK-AQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRK 112
Query: 72 KSYSFLWNTMIRAYANNGHCVETLE-LYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
+S WN+M+ AY G ++++ + + SG+ + YTFP VLKAC S + +G+
Sbjct: 113 NIFS--WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLS---LADGE 167
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+H +++ GF D YV A+L+ +Y++ G + KVF +M VRD+ SW MI+ + Q
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EAL + + + E + D+VT+ S+ Q DV+ VH Y I + D+ + N
Sbjct: 228 NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSN 287
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ MY++ G ++ A+ VFD ME RDL+SWNS++ Y QN AL F EM +P
Sbjct: 288 ALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP 347
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENM 369
+ +T + L S L R++GR HG+++ +++D + NA+++MYAK G +D A +
Sbjct: 348 DLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAV 407
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG--VKPDHITFTSILSACSH 427
F + PS R+V SWN LI GY +G +A++ ++ M+EEG + P+ T+ SIL A SH
Sbjct: 408 FEQL-PS-RDVISWNTLITGYAQNGLASEAIDAYN-MMEEGRTIVPNQGTWVSILPAYSH 464
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
G + +G K + K + +V C++DM G+ G L +A + ++P W A
Sbjct: 465 VGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIP-QETSVPWNA 523
Query: 488 LLLACRIHG 496
++ + IHG
Sbjct: 524 IISSLGIHG 532
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 282/711 (39%), Positives = 422/711 (59%), Gaps = 48/711 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSLFNSIHND 71
LL+SC QIH+ +GL +Q + +++I ++ G + +R LF+ I D
Sbjct: 15 LLESCKSFKQGLQIHAQTIVNGLHHQIFSI-SRLISFFSLLGSKDGLDHSRLLFSQI--D 71
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISS-NSYTFPFVLKACASNSLILEGK 130
F+WNTMIR Y+ + + E + LY +M GI+ N++TFPF+L +CA S + G
Sbjct: 72 CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
VH II+ GF SD +V+ AL+ +Y+ G + +FDE VRDLVS+ MI Y +
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD----------------------VL 228
+PE AL LF + Q G+L D T V++ S L + +L
Sbjct: 192 QPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILL 251
Query: 229 KAQAVHGYAICNAF------------LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRD 276
K+ V YA C + +S+V YARCG + AR +F+ M +RD
Sbjct: 252 KSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERD 311
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FH 335
+ISW +M++GY Q GQ SEAL LF EM+ KP+ VT + ++SAC LG+ LG++ +H
Sbjct: 312 VISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYH 371
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
YI N + L AVMDMYAKCG +D+A +F + + + +N +IAG HG
Sbjct: 372 QYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGL 431
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
G A+ F +++ G+KPD +TF +L AC H+GLI+EG+K F M +KP+++HY
Sbjct: 432 GETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYG 491
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPE 509
CMVD+LGR GCL EA+D++++MP N +W ALL ACR HG EIA L ++E +
Sbjct: 492 CMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQ 551
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
H +VL+SNI A +N+W E ++R+ M++ G++KP +S IE G I F +D+ +P
Sbjct: 552 HGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQ 611
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
KE+ ++ MA+ +K AGY+P+ + + D+++E++E +++YHSEKLA+AFG+M +P
Sbjct: 612 GKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTD 671
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLR+C DCH AF+ +S IY R+I VRD RFHHF G+CSC D+W
Sbjct: 672 TIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 264/669 (39%), Positives = 427/669 (63%), Gaps = 13/669 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C L +++H + G + + A ++ Y+ YG + A +F +
Sbjct: 127 FPPILKACVSLVDGKKVHCCVFKMGFEDDVF-VAASLVHLYSRYGVLDVAHKVFVDMPVK 185
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI + NG+ L + + M+ G+ ++ T +L CA + ++ G +
Sbjct: 186 DVGS--WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVL 243
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +++ G SD +V AL++MY+K G+ D VFD+M VRDLVSW +I AYEQ
Sbjct: 244 IHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNND 303
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQN 250
P AL F+ Q G+ D +T+VS+ S QL D ++++ G+ I +L+ D+ I N
Sbjct: 304 PSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGN 363
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SDCK 309
++V MYA+ G + A VFD + ++D ISWN+++TGY QNG ASEA+ ++ M+ D
Sbjct: 364 ALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI 423
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN T + ++ A +++G+ Q G K H +I +++ +D + ++D+Y KCG L+ A ++
Sbjct: 424 PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSL 483
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F +I P + +V WN +IA G+HG G +AL+ F ML E VK DHITF S+LSACSH+G
Sbjct: 484 FYEI-PRDTSVP-WNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSG 541
Query: 430 LIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+DEG+KCF M K +KP +KHY CMVD+LGRAG L +A+++++ MP+ P+ S+WGAL
Sbjct: 542 LVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGAL 601
Query: 489 LLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L AC+I+G +A++ L +++ E+ GY+VL+SNIYA + KW V K+R +++GL+
Sbjct: 602 LSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLR 661
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K +S + G + F+T ++ +P + E+YK+++ ++ ++K GY+PD S D+E++
Sbjct: 662 KTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEED 721
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
++E +LN HSE+LA+AFGI++ P + +++ KNLRVC DCH+A ++IS I R+I+VRD+
Sbjct: 722 EKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDS 781
Query: 664 NRFHHFEGG 672
NRFHHF+ G
Sbjct: 782 NRFHHFKDG 790
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 272/493 (55%), Gaps = 17/493 (3%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ L SC + + +++H+ L G +Q + L K+I Y T+G+ + +RS F+ IH
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGK-SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKK 83
Query: 72 KSYSFLWNTMIRAYANNGHCVETL----ELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+S WN++I AY G E + +L+S + + YTFP +LKAC S ++
Sbjct: 84 NIFS--WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LV 138
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+GK VH + + GF D +V A+LV +Y++ G D KVF +M V+D+ SW MI+ +
Sbjct: 139 DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q AL + + + EG+ D++T+ S+ Q DV+ +H + + + D+
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVF 258
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N+++ MY++ G ++ A++VFD ME RDL+SWNS++ Y QN S AL F MQ
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG 318
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTA 366
+P+ +T + L S + L +++ R G++I + D + NA+++MYAK G ++ A
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSAC 425
+F+ + ++ SWN L+ GY +G +A++ ++ M E P+ T+ SI+ A
Sbjct: 379 HTVFDQL--PRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAY 436
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV- 484
SH G + +G K A + K S+ +V C++D+ G+ G L +A + + +P + SV
Sbjct: 437 SHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE--IPRDTSVP 494
Query: 485 WGALLLACRIHGE 497
W A++ + IHG
Sbjct: 495 WNAIIASLGIHGR 507
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 270/632 (42%), Positives = 395/632 (62%), Gaps = 10/632 (1%)
Query: 55 YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
+ + N R LF+ I + FLWNTMIR +N + +E Y MR G N++TFP
Sbjct: 59 FSDTNYTRFLFHQIK--QPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFP 116
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
FVLKACA + G +H +++ GF D +V+ +LV +YAKCG +D KVFD++ +
Sbjct: 117 FVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDK 176
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
++VSWT +I+ Y K EA+ +F++ + L DS TIV V SA QLGD+ + +H
Sbjct: 177 NVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIH 236
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
+ + ++ + S+V MYA+CGN+EKAR VFD M ++D++SW +M+ GY NG
Sbjct: 237 KCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPK 296
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EA+ LF +MQ + KP+ T + ++SAC LG+ +LG G + + + L A++
Sbjct: 297 EAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALI 356
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
D+YAKCG + A +F + +R V WN +I+G M+G+ + + F Q+ + G+KPD
Sbjct: 357 DLYAKCGSMSRAWEVFKGMKEKDRVV--WNAIISGLAMNGYVKISFGLFGQVEKLGIKPD 414
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
TF +L C+HAGL+DEGR+ F M + S+ P ++HY CMVD+LGRAG L EA +I
Sbjct: 415 GNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLI 474
Query: 474 KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
+ MP+ N VWGALL ACRIH E+A L +LEP ++G +VL+SNIY+A+ KW
Sbjct: 475 RNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWD 534
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
E K+R M K ++KP S IE + F D+ +P +++Y K++ + ++K+AG
Sbjct: 535 EAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAG 594
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y+P L D+E+E++EH L HSEKLA+AFG+++ TP AV++V KNLRVC DCH A +
Sbjct: 595 YVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIK 654
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS I R+I VRD NRFH F G+CSCNDYW
Sbjct: 655 LISSITGREITVRDNNRFHCFREGSCSCNDYW 686
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/671 (39%), Positives = 426/671 (63%), Gaps = 21/671 (3%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+ +L++S IN+ + + + K T + + RS+F + DK+ + WN++I +A
Sbjct: 5 VSRTLSSSTTINKCIRMHSTTTTKTTEWTKTANLRSMFGK-YVDKTSVYSWNSIIADFAR 63
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
+G ++ L +S+MR+ + N TFP +K+C+S + GK +H G+ SD +V
Sbjct: 64 SGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFV 123
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK------ 201
+AL+DMY+KCG +D K+FDE+ R++VSWT MI+ Y Q E+ EA+ LF++
Sbjct: 124 ASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDE 183
Query: 202 -----TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
G+ DSV + V SA ++ + VHG A+ F L + N+++ Y
Sbjct: 184 TDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAY 243
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTA 315
A+CG + +R VFD ME+ D+ SWNS++ Y QNG + EA LF +M + + + N VT
Sbjct: 244 AKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTL 303
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++ AC + G+ Q+G+ H ++ ++ + + +++DMY KCG ++ A F+ +
Sbjct: 304 SAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRL-- 361
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+NV SW V++AGYGMHGHG++A++ F +M+ G+KP++ITF S+L+ACSHAGL+ EG
Sbjct: 362 KRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGW 421
Query: 436 KCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
F M + V+P ++HY+CMVD+LGRAG L EA+ +I++M + P+ VWG+LL ACRI
Sbjct: 422 HWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRI 481
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H GEI+A LF+L+P + GY+VL+SNIYA + +W +V ++R MKN GL K +S
Sbjct: 482 HKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYS 541
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
++E+ + F D+ +P +++Y+ ++ + V+++ GYMP+++ L+DV+ E++ +L
Sbjct: 542 IVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVEEKGMVL 601
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLAVAFGIMN P +V+Q+ KNLR+C DCH A + IS I R+I++RD+ RFHHF
Sbjct: 602 RVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDSKRFHHF 661
Query: 670 EGGTCSCNDYW 680
+ G CSC DYW
Sbjct: 662 KDGLCSCGDYW 672
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/677 (39%), Positives = 415/677 (61%), Gaps = 10/677 (1%)
Query: 9 EGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ FY L+ L QI++ L +GL L AK++ K + GE + AR LF+
Sbjct: 75 DKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGF-LIAKLVNKASNIGEVSCARKLFDKF 133
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ FLWN ++R Y+ +G +E+Y+ M+ + +S + ++FP VLKAC++ +
Sbjct: 134 PDPDV--FLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEM 191
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ VHG I R GF SD +VQ LV +YAKCG+ VF + R +VSWT +I+ Y Q
Sbjct: 192 GRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQ 251
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+P EAL +F + ++ + D + +VSV A + D+ +++HG I + +
Sbjct: 252 NGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDL 311
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
S+ ++YA+CG+V ARL F+ +E LI WN+M++GY++NG A EA+ LF M++ +
Sbjct: 312 LISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNI 371
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+P+ +T ++AC +GS +L R YI S + D + +++D YAKCG +D A
Sbjct: 372 RPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARF 431
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+ I +++V W+ ++ GYG+HG GR+++ F M + GV P+ +TF +L+AC ++
Sbjct: 432 VFDRI--PDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNS 489
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
GL++EG F M ++P +HYAC+VD+LGRAG L A++ + MP+ P SVWGAL
Sbjct: 490 GLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGAL 549
Query: 489 LLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L AC+IH GE AA LF L+P +TG++V +SN+YA+S W V K+R M+ KGL
Sbjct: 550 LSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLT 609
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K +SVIE +Q F D+ +P KE++++VE + +K AG++P LHD+ E
Sbjct: 610 KHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYE 669
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
+ E L HSE+LA+A+G+++ P +++TKNLR C++CH+A + IS + R+I+VRDA
Sbjct: 670 ETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDA 729
Query: 664 NRFHHFEGGTCSCNDYW 680
RFHHF+ G CSC DYW
Sbjct: 730 CRFHHFKDGACSCGDYW 746
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/644 (40%), Positives = 413/644 (64%), Gaps = 18/644 (2%)
Query: 53 TTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYT 112
TT NT + + + D++ + WN++I A G E+L +S MR+ I N T
Sbjct: 25 TTAAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRST 84
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
FP +K+C++ + GK H + GF SD +V +AL+DMY+KCG+ + +FDE+
Sbjct: 85 FPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP 144
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQK---------TQQEGLLSDSVTIVSVASAVGQ 223
R++V+WT +IT Y Q + EAL++F++ ++ G DSV ++SV SA +
Sbjct: 145 RRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSR 204
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ + ++ VHG AI + + ++N+++ YA+CG V +R VFD M ++D++SWNSM
Sbjct: 205 VSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSM 264
Query: 284 LTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
+ Y QNG +++A +F M + K N VT L+ AC + G+ ++G H +I
Sbjct: 265 IAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMG 324
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ + +++DMY KCG + A N F+ + E+NV SW +IAGYGMHG R+AL+
Sbjct: 325 YVNNVIMATSIIDMYCKCGQAEMARNAFDGM--KEKNVRSWTAMIAGYGMHGFAREALDV 382
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLG 461
F QM+ GVKP++ITF S+L+ACSHAG ++EG + F M+ + +V+P V+HY CMVD+LG
Sbjct: 383 FYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLG 442
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG + EA+++IK M + + +WG+LL ACRIH EI+A LF+L+P + GY+VL
Sbjct: 443 RAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVL 502
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
++NIYA + +W++V ++R +K++GL KP +S++E + F D+ +P +++YK
Sbjct: 503 LANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKY 562
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
+E ++V+++ AGY+P+++ LHDV++E++E ++ HSEKLAVAFG+MN P + + V KN
Sbjct: 563 LEELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKN 622
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LRVC DCH+ + IS I R+IIVRDA RFHHF+ G CSC DYW
Sbjct: 623 LRVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 268/680 (39%), Positives = 413/680 (60%), Gaps = 16/680 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI-HN 70
+ LL++ + Q+H+ GL+ ++ Y +G A F+ + H
Sbjct: 74 FPPLLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHR 133
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
D WN M+ N E + L+ M G++ ++ T VL C
Sbjct: 134 DVP---AWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALAL 190
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+H ++ G + +V A++D+Y K G ++ KVFD MS RDLV+W +I+ +EQ
Sbjct: 191 AMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGG 250
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF-LEDLCIQ 249
+ A+ +F + G+ D +T++S+ASA+ Q GD+ ++VH Y + + + D+
Sbjct: 251 QVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAG 310
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-C 308
N+IV MYA+ +E A+ +FD M RD +SWN+++TGY+QNG ASEA+ ++D MQ +
Sbjct: 311 NAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGL 370
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP T + ++ A ++LG+ Q G + H I + + +D + V+D+YAKCG LD A
Sbjct: 371 KPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAML 430
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F R+ WN +I+G G+HGHG KAL FSQM +EG+ PDH+TF S+L+ACSHA
Sbjct: 431 LFEQT--PRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHA 488
Query: 429 GLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+D+GR F M T +KP KHYACMVDM GRAG L +AFD I+ MP+ P+ ++WGA
Sbjct: 489 GLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGA 548
Query: 488 LLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACRIHG ++A+ LF+L+P++ GY+VLMSN+YA KW V ++R ++ + L
Sbjct: 549 LLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNL 608
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVN--PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
+K +S IE + + F++ +++N P +E+ +++ + +I+ GY+PD S L DV
Sbjct: 609 QKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDV 668
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E++++E +LN HSE+LA+AFGI+N P + + KNLRVC DCH+A ++IS I R+IIV
Sbjct: 669 EEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIV 728
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD+NRFHHF+ G CSC D+W
Sbjct: 729 RDSNRFHHFKDGYCSCGDFW 748
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/675 (39%), Positives = 408/675 (60%), Gaps = 15/675 (2%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++CN +L Q +H+ + G + +++G I+ YT G A +F+ +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGW-DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR 376
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W MI +A +G E ++ M SGI N TF +L AC+S S + G+
Sbjct: 377 NVVS--WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+ II G+ SD V+ AL+ MYAKCG D +VF+++S +++V+W MITAY Q E+
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQ 494
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQN 250
+ AL FQ +EG+ +S T S+ + + + VH + I A LE DL + N
Sbjct: 495 YDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVH-FLIMKAGLESDLHVSN 553
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V+M+ CG++ A+ +F+ M KRDL+SWN+++ G++Q+G+ A F MQ S KP
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ +T L++AC + GR+ H I + D + ++ MY KCG ++ A +F
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ + ++NV SW +IAGY HG G++ALE F QM +EGVKPD ITF LSAC+HAGL
Sbjct: 674 HKL--PKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGL 731
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
I+EG F M + +++P ++HY CMVD+ GRAG L EA + I +M + P+ VWGALL
Sbjct: 732 IEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG 791
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC++H E AA +L+P G FV++SNIYAA+ W+EV K+R+ M ++G+ K
Sbjct: 792 ACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKK 851
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F++ D+ +P +E++ ++E + +E++ GY+PD LHDVED ++
Sbjct: 852 PGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEK 911
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E L YHSE+LA+ +G++ P + ++KNLRVC DCH+A +FIS I +R+II RD+NR
Sbjct: 912 EQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNR 971
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSC D+W
Sbjct: 972 FHHFKDGVCSCGDFW 986
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 263/486 (54%), Gaps = 8/486 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++++ + +G + L +G +I + G+ A +F+++ + W +MI
Sbjct: 231 RELYNLILKAGW-DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVT--WTSMITGL 287
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A +G + L+ M G+ + F +L+AC + +GK VH + G+ ++
Sbjct: 288 ARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEI 347
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
YV A++ MY KCG +D +VFD + R++VSWT MI + Q + +EA + F K +
Sbjct: 348 YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + VT +S+ A + + Q + + I + D ++ ++++MYA+CG+++ A
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ + K+++++WN+M+T Y+Q+ Q AL F + KPN T +++ C
Sbjct: 468 HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
S +LG+ H I+ + ++ D + NA++ M+ CGDL +A+N+FND+ +R++ SWN
Sbjct: 528 DSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM--PKRDLVSWNT 585
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+IAG+ HG + A ++F M E G+KPD ITFT +L+AC+ + EGR+ A +T+ +
Sbjct: 586 IIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAA 645
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--GEIAANYL 503
+V ++ M + G + +A + ++P N W +++ H G+ A
Sbjct: 646 FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQHGRGKEALELF 704
Query: 504 FQLEPE 509
+Q++ E
Sbjct: 705 YQMQQE 710
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 267/502 (53%), Gaps = 13/502 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL+ C +L +I++ + SG + + + +I Y G +A+ +F+ +
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSG-VQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
YS WN ++ Y +G E +L+ M + + + TF +L ACA + +
Sbjct: 172 REKDVYS--WNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ ++ I++ G+ +D +V AL++M+ KCG D KVFD + RDLV+WT MIT +
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ ++A LFQ+ ++EG+ D V VS+ A + + + VH + ++ +
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+I++MY +CG++E A VFD+++ R+++SW +M+ G+ Q+G+ EA L F++M S
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+PN VT + ++ AC+ + + G++ +II + D +R A++ MYAKCG L A
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F I S++NV +WN +I Y H AL F +L+EG+KP+ TFTSIL+ C +
Sbjct: 470 VFEKI--SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
++ G+ + K ++ ++ +V M G L A ++ M P D V W
Sbjct: 528 DSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM--PKRDLVSWNT 585
Query: 488 LLLACRIHG--EIAANYLFQLE 507
++ HG ++A +Y ++
Sbjct: 586 IIAGFVQHGKNQVAFDYFKMMQ 607
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 216/413 (52%), Gaps = 3/413 (0%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N ++ + G E +++ + S I T+ +L+ C + +G+ ++ I +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
+G D +++ L++MYAKCG T ++FD+M +D+ SW +++ Y Q EEA L
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
++ Q+ + D T VS+ +A +V K + ++ + + DL + +++ M+ +
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG++ A VFD + RDL++W SM+TG ++G+ +A LF M+ +P+ V + L
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ AC + + + G+K H + + + A++ MY KCG ++ A +F+ + R
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV--KGR 376
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
NV SW +IAG+ HG +A FF++M+E G++P+ +TF SIL ACS + G++
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQ 436
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ + + + ++ M + G L +A + +++ N W A++ A
Sbjct: 437 DHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 132/253 (52%), Gaps = 8/253 (3%)
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G K R V + +D N++L + GQ +EA+ + + + +S + T L+
Sbjct: 59 GRCPKGRCVV-FADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALL 117
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
C + G + + +I S ++ D +RN +++MYAKCG+ +A+ +F+D+ E++
Sbjct: 118 QLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMR--EKD 175
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SWN+L+ GY HG +A + QM+++ VKPD TF S+L+AC+ A +D+GR+ +
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEI 498
+ K ++ +++M + G + +A + LP D V W +++ HG
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN--LPTRDLVTWTSMITGLARHGRF 293
Query: 499 --AANYLFQLEPE 509
A N ++E E
Sbjct: 294 KQACNLFQRMEEE 306
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 276/680 (40%), Positives = 414/680 (60%), Gaps = 13/680 (1%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+ G ++L++ + L L+ IH++L GL ++ +L K++ +G N + + +
Sbjct: 9 SAGIKNRLIQGFSCLKHLKHIHAALLRLGL-DEDTYLLNKVLRFSFNFGNTNYSFRILD- 66
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ FL+NTMIR N E++E+Y +MR+ G+S +S+TFPFVLKACA
Sbjct: 67 -QTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSE 125
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +H +++ G +D++V+ +L+++Y KCG D+ KVFD++ ++ SWT I+ Y
Sbjct: 126 LGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYV 185
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
K EA+ +F++ + GL DS ++V V SA + GD+ + + Y N + ++
Sbjct: 186 GVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVF 245
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ ++V Y +CGN+E+AR VFD M +++++SW+SM+ GY NG EAL LF +M N
Sbjct: 246 VATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEG 305
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID-ATLRNAVMDMYAKCGDLDTA 366
KP+ + ++ +C LG+ +LG + +IN N +D + L A++DMYAKCG +D A
Sbjct: 306 LKPDCYAMVGVLCSCARLGALELG-DWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRA 364
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F + +R V WN I+G M GH + AL F QM + G+KPD TF +L AC+
Sbjct: 365 WEVFRGMRKKDRVV--WNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACT 422
Query: 427 HAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
HAGL++EGR+ F M ++ PE++HY CMVD+LGRAGCL EA +IK MP+ N VW
Sbjct: 423 HAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVW 482
Query: 486 GALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GALL CR+H E+ L LEP H+G +VL+SNIYAAS+KW E K+R M +
Sbjct: 483 GALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSER 542
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK +S IE + F D +P +++Y K+ +A ++K AGY+P L D+
Sbjct: 543 GVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDI 602
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E+E++EH + HSEKLAVAFG+++ P + V KNLRVC DCH A + IS I R+IIV
Sbjct: 603 EEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIV 662
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD NRFH F G CSC DYW
Sbjct: 663 RDNNRFHCFTDGLCSCKDYW 682
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/675 (39%), Positives = 407/675 (60%), Gaps = 15/675 (2%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++CN +L Q +H+ + G + +++G I+ YT G A +F+ +
Sbjct: 318 LLRACNHPEALEQGKKVHARMKEVGW-DTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR 376
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W MI +A +G E ++ M SGI N TF +L AC+S S + G+
Sbjct: 377 NVVS--WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+ II G+ SD V+ AL+ MYAKCG D +VF+++S +++V+W MITAY Q E+
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQ 494
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQN 250
+ AL FQ +EG+ +S T S+ + + + VH + I A LE DL + N
Sbjct: 495 YDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVH-FLIMKAGLESDLHVSN 553
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V+M+ CG++ A+ +F+ M KRDL+SWN+++ G++Q+G+ A F MQ S KP
Sbjct: 554 ALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKP 613
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ +T L++AC + GR+ H I + D + ++ MY KCG ++ A +F
Sbjct: 614 DKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVF 673
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ + ++NV SW +I GY HG G++ALE F QM +EGVKPD ITF LSAC+HAGL
Sbjct: 674 HKL--PKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGL 731
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
I+EG F M + +++P ++HY CMVD+ GRAG L EA + I +M + P+ VWGALL
Sbjct: 732 IEEGLHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLG 791
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC++H E AA +L+P G FV++SNIYAA+ W+EV K+R+ M ++G+ K
Sbjct: 792 ACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKK 851
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F++ D+ +P +E++ ++E + +E++ GY+PD LHDVED ++
Sbjct: 852 PGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEK 911
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E L YHSE+LA+ +G++ P + ++KNLRVC DCH+A +FIS I +R+II RD+NR
Sbjct: 912 EQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNR 971
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSC D+W
Sbjct: 972 FHHFKDGVCSCGDFW 986
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 263/486 (54%), Gaps = 8/486 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++++ + +G + L +G +I + G+ A +F+++ + W +MI
Sbjct: 231 RELYNLILKAGW-DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVT--WTSMITGL 287
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A +G + L+ M G+ + F +L+AC + +GK VH + G+ ++
Sbjct: 288 ARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEI 347
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
YV A++ MY KCG +D +VFD + R++VSWT MI + Q + +EA + F K +
Sbjct: 348 YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + VT +S+ A + + Q + + I + D ++ ++++MYA+CG+++ A
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ + K+++++WN+M+T Y+Q+ Q AL F + KPN T +++ C
Sbjct: 468 HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
S +LG+ H I+ + ++ D + NA++ M+ CGDL +A+N+FND+ +R++ SWN
Sbjct: 528 DSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM--PKRDLVSWNT 585
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+IAG+ HG + A ++F M E G+KPD ITFT +L+AC+ + EGR+ A +T+ +
Sbjct: 586 IIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAA 645
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--GEIAANYL 503
+V ++ M + G + +A + ++P N W +++ H G+ A
Sbjct: 646 FDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQHGRGKEALELF 704
Query: 504 FQLEPE 509
+Q++ E
Sbjct: 705 YQMQQE 710
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 150/498 (30%), Positives = 265/498 (53%), Gaps = 13/498 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL+ C +L +I++ + SG + + + +I Y G +A+ +F+ +
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSG-VQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
YS WN ++ Y +G E +L+ M + + + TF +L ACA + +
Sbjct: 172 REKDVYS--WNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ ++ I++ G+ +D +V AL++M+ KCG D KVFD + RDLV+WT MIT +
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ ++A LFQ+ ++EG+ D V VS+ A + + + VH + ++ +
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+I++MY +CG++E A VFD+++ R+++SW +M+ G+ Q+G+ EA L F++M S
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+PN VT + ++ AC+ + + G++ +II + D +R A++ MYAKCG L A
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F I S++NV +WN +I Y H AL F +L+EG+KP+ TFTSIL+ C +
Sbjct: 470 VFEKI--SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
++ G+ + K ++ ++ +V M G L A ++ M P D V W
Sbjct: 528 DSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDM--PKRDLVSWNT 585
Query: 488 LLLACRIHG--EIAANYL 503
++ HG ++A +Y
Sbjct: 586 IIAGFVQHGKNQVAFDYF 603
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 215/413 (52%), Gaps = 3/413 (0%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N ++ + G E +++ + S I T+ +L+ C + +G+ ++ I +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
+G D ++ L++MYAKCG T ++FD+M +D+ SW +++ Y Q EEA L
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
++ Q+ + D T VS+ +A +V K + ++ + + DL + +++ M+ +
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG++ A VFD + RDL++W SM+TG ++G+ +A LF M+ +P+ V + L
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ AC + + + G+K H + + + A++ MY KCG ++ A +F+ + R
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV--KGR 376
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
NV SW +IAG+ HG +A FF++M+E G++P+ +TF SIL ACS + G++
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQ 436
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ + + + ++ M + G L +A + +++ N W A++ A
Sbjct: 437 DHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%), Gaps = 8/253 (3%)
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G K R V + +D N++L + GQ +EA+ + + + +S + T L+
Sbjct: 59 GRCPKGRCVV-FADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALL 117
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
C + G + + +I S ++ D + N +++MYAKCG+ +A+ +F+D+ E++
Sbjct: 118 QLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMR--EKD 175
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SWN+L+ GY HG +A + QM+++ VKPD TF S+L+AC+ A +D+GR+ +
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEI 498
+ K ++ +++M + G + +A + LP D V W +++ HG
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN--LPTRDLVTWTSMITGLARHGRF 293
Query: 499 --AANYLFQLEPE 509
A N ++E E
Sbjct: 294 KQACNLFQRMEEE 306
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/674 (39%), Positives = 404/674 (59%), Gaps = 13/674 (1%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LLK+CN +L Q +H+ + GL + +++G ++ YT G A +FN +
Sbjct: 312 LLKACNHPEALEQGKRVHARMKEVGL-DTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR 370
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W MI +A +G E ++ M SGI N TF +L AC+ S + +G+
Sbjct: 371 NVVS--WTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H II+ G+++D V+ AL+ MYAKCG D VF+ +S +++V+W MITAY Q EK
Sbjct: 429 IHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEK 488
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ A+ FQ +EG+ DS T S+ + + + V I F DL I+N+
Sbjct: 489 YDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNA 548
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V+M+ CG++ A +F+ M +RDL+SWN+++ G++Q+G+ A F MQ S KP+
Sbjct: 549 LVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPD 608
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T L++AC + GR+ H I + + D + ++ MY KCG +D A +F+
Sbjct: 609 QITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFH 668
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ ++NV SW +I GY HG G++ALE F QM +EGVKPD ITF LSAC+HAGLI
Sbjct: 669 NL--PKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLI 726
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG F M +++P ++HY CMVD+ GRAG L+EA + I +M + P+ +WGALL A
Sbjct: 727 KEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGA 786
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C++H E A +L+P G +V++SNIYAA+ W+EV K+R+ M ++G+ K
Sbjct: 787 CQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKP 846
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S IE + F + D+ +P +E++ ++ + +E+K GY+PD LHDVED ++E
Sbjct: 847 GQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKE 906
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
H L +HSE+LA+A+G++ P + ++KNLRVC DCH+A + IS I +R+II RD+NRF
Sbjct: 907 HALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRF 966
Query: 667 HHFEGGTCSCNDYW 680
HHF+ G CSC D+W
Sbjct: 967 HHFKDGVCSCGDFW 980
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 258/490 (52%), Gaps = 11/490 (2%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL+ C L +IH+ + S I + + +I Y G N+A+ +F+ +
Sbjct: 107 YSSLLQLCIKHKNLGDGERIHNHIKFSK-IQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ YS WN ++ Y + E L+ M + G+ + YTF ++L ACA + +
Sbjct: 166 PDKDVYS--WNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDK 223
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G + I+ G+ +D +V AL++M+ KCG DD KVF+ + RDL++WT MIT +
Sbjct: 224 GGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLAR 283
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ ++A LFQ ++EG+ D V VS+ A + + + VH ++ +
Sbjct: 284 HRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYV 343
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++++MY +CG++E A VF++++ R+++SW +M+ G+ Q+G+ EA L F++M S
Sbjct: 344 GTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGI 403
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+PN VT + ++ AC+ + + GR+ H II + D +R A++ MYAKCG L A N
Sbjct: 404 EPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARN 463
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F I S++NV +WN +I Y H A+ F +L+EG+KPD TFTSIL+ C
Sbjct: 464 VFERI--SKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSP 521
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
++ G+ + + + + ++ +V M G L A ++ M P D V W
Sbjct: 522 DALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDM--PERDLVSWNT 579
Query: 488 LLLACRIHGE 497
++ HGE
Sbjct: 580 IIAGFVQHGE 589
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 249/466 (53%), Gaps = 5/466 (1%)
Query: 31 SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGH 90
SL + + L +G +I + G + A +FN++ + W +MI A +
Sbjct: 229 SLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNL--PRRDLITWTSMITGLARHRQ 286
Query: 91 CVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA 150
+ L+ M G+ + F +LKAC + +GK VH + G ++ YV A
Sbjct: 287 FKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTA 346
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
L+ MY KCG +D +VF+ + R++VSWT MI + Q + EEA + F K + G+ +
Sbjct: 347 LLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPN 406
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
VT +S+ A + + + + +H I ++ D ++ ++++MYA+CG++ AR VF+
Sbjct: 407 RVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFE 466
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
+ K+++++WN+M+T Y+Q+ + A+ F + KP+ T +++ C + +L
Sbjct: 467 RISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALEL 526
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G+ II + + D +RNA++ M+ CGDL +A N+FND+ ER++ SWN +IAG+
Sbjct: 527 GKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDM--PERDLVSWNTIIAGF 584
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
HG + A ++F M E GVKPD ITFT +L+AC+ + EGR+ A +T+ ++ +V
Sbjct: 585 VQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDV 644
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
++ M + G + +A + +P N W +++ HG
Sbjct: 645 VVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHG 689
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 215/413 (52%), Gaps = 3/413 (0%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N + + G E + + ++ I + T+ +L+ C + + +G+ +H I
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
+ D ++ L+ MYAKCG T+ ++FDEM +D+ SW +++ Y Q + EEA L
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
++ Q+G+ D T V + +A +V K + + + DL + +++ M+ +
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG V+ A VF+ + +RDLI+W SM+TG ++ Q +A LF M+ +P+ V + L
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ AC + + + G++ H + + + + A++ MY KCG ++ A +FN + R
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLV--KGR 370
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
NV SW +IAG+ HG +A FF++M+E G++P+ +TF SIL ACS + +GR+
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIH 430
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ K + + ++ M + G L +A ++ +++ N W A++ A
Sbjct: 431 DRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITA 482
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/662 (40%), Positives = 414/662 (62%), Gaps = 50/662 (7%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H+ L +G + Q++ + +++ Y G+ + +R F+ I Y+ WN+MI AY +
Sbjct: 38 LHALLVVAGKV-QSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYA--WNSMISAYVH 94
Query: 88 NGHCVETLE-LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NGH E + Y + S I + YTFP VLKAC + +++G+ +H + GF + +
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGT---LVDGRKIHCWAFKLGFQWNVF 151
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V A+L+ MY++ G T +FD+M RD+ SW MI+ Q +AL + + + EG
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ + VT+VS+ V MYA+ G ++ A
Sbjct: 212 IKMNFVTVVSILPV-------------------------------FVDMYAKLGLLDSAH 240
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK---PNPVTALILVSACT 323
VF+++ +D+ISWN+++TGY QNG ASEA+ ++ M+ +CK PN T + ++ A
Sbjct: 241 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME--ECKEIIPNQGTWVSILPAYA 298
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
++G+ Q G K HG +I +N+ +D + ++D+Y KCG L A ++F + P E +V+ W
Sbjct: 299 HVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV-PQESSVT-W 356
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I+ +G+HGH K L+ F +ML+EGVKPDH+TF S+LSACSH+G ++EG+ CF M +
Sbjct: 357 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 416
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI----- 498
+KP +KHY CMVD+LGRAG L A+D IK MPL P+ S+WGALL ACRIHG I
Sbjct: 417 YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKF 476
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
A++ LF+++ ++ GY+VL+SNIYA KW V K+R + +GLKK +S IE + +
Sbjct: 477 ASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVD 536
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F+T ++ +P KE+Y+++ + ++K GY+PD S L DVE++++EH+L HSE+LA+
Sbjct: 537 VFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAI 596
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AFGI++ P++ +++ KNLRVC DCH+A +FIS I +R+I+VRD+NRFHHF+ G CSC D
Sbjct: 597 AFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGD 656
Query: 679 YW 680
YW
Sbjct: 657 YW 658
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 188/399 (47%), Gaps = 46/399 (11%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
K +H ++ G + ++ LV++YA G FD++ +D+ +W MI+AY
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 189 AEKPEEAL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
EA+ +Q + D T V A G L D + +H +A F ++
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVF 151
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ S++ MY+R G AR +FD M RD+ SWN+M++G IQNG A++AL + DEM+
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
K N VT + ++ +DMYAK G LD+A
Sbjct: 212 IKMNFVTVV-------------------------------SILPVFVDMYAKLGLLDSAH 240
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACS 426
+F I ++V SWN LI GY +G +A+E + M E + + P+ T+ SIL A +
Sbjct: 241 KVFEII--PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYA 298
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
H G + +G K + K ++ +V C++D+ G+ G L +A + Q+P + W
Sbjct: 299 HVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWN 357
Query: 487 ALLLACRIHGEIAANY-LF------QLEPEHTGYFVLMS 518
A++ IHG LF ++P+H + L+S
Sbjct: 358 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLS 396
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 529 bits (1363), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/619 (41%), Positives = 386/619 (62%), Gaps = 30/619 (4%)
Query: 90 HCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA 149
H L Y+ MR+ I +S+ P VLKAC+ S+ GK +HG ++ G +SD +V
Sbjct: 89 HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRD----------------------LVSWTVMITAYE 187
AL+ MY++CG +FD+MS RD +VSWT MI Y
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ EE LF + +E + + +T++S+ + G +G V + +H Y + N F L
Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ ++V MY +CG + AR +FD M+ +D+++W +M++ Y Q A LF +M+++
Sbjct: 269 LATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNG 328
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+PN +T + L+S C G+ +G+ FH YI +++D L+ A++DMYAKCGD+ A+
Sbjct: 329 VRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQ 388
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F++ +R++ +WNV++AGYGMHG+G KAL+ F++M GVKP+ ITF L ACSH
Sbjct: 389 RLFSE--AIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSH 446
Query: 428 AGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL+ EG+ F M + P+V+HY CMVD+LGRAG L EA+ MI+ MP+ PN ++WG
Sbjct: 447 AGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWG 506
Query: 487 ALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
A+L AC+IH GE+AA L LEP++ GY VLMSNIYAA+N+W +V +R+ +K+ G
Sbjct: 507 AMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTG 566
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+KK S IE + F D +P +++ + + M+ ++K AGY+PD S LH+++
Sbjct: 567 IKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNID 626
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
+E++E LNYHSEKLA+AFG+++ P ++V KNLR+C+DCH+ + +S IY+R IIVR
Sbjct: 627 EEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVR 686
Query: 662 DANRFHHFEGGTCSCNDYW 680
D NRFHHF G+CSC YW
Sbjct: 687 DRNRFHHFREGSCSCGGYW 705
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 198/420 (47%), Gaps = 31/420 (7%)
Query: 1 MRRLGPSTEGFY-DQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MR+L + F +LK+C+ ++ R +IH +GL++ + A ++ Y+ G
Sbjct: 100 MRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNA-LMQMYSECG 158
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAY-------------------ANNGHCVETLE- 96
+AR LF+ + S W+TMIRAY A C + E
Sbjct: 159 SLVSARLLFDKMSERDVVS--WSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEG 216
Query: 97 --LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
L+ M + N T ++ +C + GK +H I+R GF + ALVDM
Sbjct: 217 ERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDM 276
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
Y KCG+ +FD M +D+++WT MI+AY QA + A LF + + G+ + +T+
Sbjct: 277 YGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTM 336
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
VS+ S G + + H Y D+ ++ +++ MYA+CG++ A+ +F
Sbjct: 337 VSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAID 396
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK- 333
RD+ +WN M+ GY +G +AL LF EM+ KPN +T + + AC++ G G+
Sbjct: 397 RDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGL 456
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
F I + + ++D+ + G LD A M + P N++ W ++A +H
Sbjct: 457 FEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM-PVTPNIAIWGAMLAACKIH 515
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 272/679 (40%), Positives = 410/679 (60%), Gaps = 14/679 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ L+++ AS Q+H+ GL++ + ++ Y +G A +F+ +
Sbjct: 72 FPPLVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPER 131
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ WN M+ N + + L M G++ ++ T VL C V
Sbjct: 132 DVPA--WNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALV 189
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++ G + +V AL+D+Y K G + VF M++RDLV+W +I+A EQ K
Sbjct: 190 MHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGK 249
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF-LEDLCIQN 250
A+ LF + G+ D +T+VS+ASAV Q GD L A++VH Y + + D+ N
Sbjct: 250 VAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGN 309
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CK 309
++V MYA+ ++ A+ VFD + RD++SWN+++TGY+QNG A+EA+ ++++M N + K
Sbjct: 310 AMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLK 369
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P T + ++ A +YLG Q G + H I + + +D + ++D+YAKCG L E M
Sbjct: 370 PIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKL--VEAM 427
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F H R+ WN +IAG G+HGHG KAL FSQM +E +KPDH+TF S+L+ACSHAG
Sbjct: 428 FLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAG 487
Query: 430 LIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+D+GR F M T + P KHY CMVDMLGRAG L EAF+ I+ MP+ P+ +VWGAL
Sbjct: 488 LVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGAL 547
Query: 489 LLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L ACRIHG ++A+ LF+L+PE+ GY+VLMSN+YA KW V +R ++ + L+
Sbjct: 548 LGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQ 607
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWK--EVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
K +S +E + F++ + P+ + E+ + + + ++K AGY+PD S L DVE
Sbjct: 608 KTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVE 667
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
++++E +LN HSE+LA+AFGI+N P + + KNLRVC DCHSA ++IS I R+IIVR
Sbjct: 668 EDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVR 727
Query: 662 DANRFHHFEGGTCSCNDYW 680
DANRFHHF+ G CSC D+W
Sbjct: 728 DANRFHHFKDGHCSCGDFW 746
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/680 (39%), Positives = 414/680 (60%), Gaps = 12/680 (1%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
+++ FY L+ + L QIH+ L SGL + L K++ + G+ AR LF+
Sbjct: 54 NSDSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGF-LMTKLVNGSSNLGQICYARKLFD 112
Query: 67 SI-HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ D F+WN +IR+Y+ N +T+E+Y MR +G+ + +TFP+VLKAC
Sbjct: 113 EFCYPD---VFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLD 169
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
++HG II+ GF SD +VQ LV +YAKCG VFD + R +VSWT +I+
Sbjct: 170 FGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISG 229
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y Q K EAL +F + + G+ D + +VS+ A + D+ + +++HG+ I ++
Sbjct: 230 YAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDE 289
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ S+ A YA+CG V A+ FD M+ ++I WN+M++GY +NG A EA+ LF M +
Sbjct: 290 PALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMIS 349
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+ KP+ VT V A +GS +L + Y+ SN D + +++DMYAKCG ++
Sbjct: 350 RNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEF 409
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F+ S+++V W+ +I GYG+HG G +A+ + M + GV P+ +TF +L+AC
Sbjct: 410 ARRVFD--RNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTAC 467
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
+H+GL+ EG + F M + P +HY+C+VD+LGRAG L EA I ++P+ P SVW
Sbjct: 468 NHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVW 527
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GALL AC+I+ GE AAN LF L+P +TG++V +SN+YA+S W V +R M+ K
Sbjct: 528 GALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREK 587
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
GL K +SVIE +Q FH D+ +P KE++ +++ + +K G++P LHD+
Sbjct: 588 GLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDL 647
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E++E L++HSE++AVA+G+++ P +++TKNLR C +CHSA + IS + R+IIV
Sbjct: 648 NYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIV 707
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RDANRFHHF+ G CSC DYW
Sbjct: 708 RDANRFHHFKDGLCSCGDYW 727
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 271/678 (39%), Positives = 408/678 (60%), Gaps = 15/678 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ LLK C A L+ +IH L T+ + ++ Y + + A +F+ +
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTG-VVNMYAKCRQIDDAYKMFDRM 208
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WNT+I ++ NG + LEL M+ G +S T VL A A L++
Sbjct: 209 PERDLVS--WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +HG IR GF + AL DMY+KCG + +FD M + +VSW M+ Y Q
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+PE+A+ +F+K +EG+ VTI+ A LGD+ + + VH + D+ +
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
NS+++MY++C V+ A +F+ + R +SWN+M+ GY QNG+ SEAL F EM++
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP+ T + ++ A L + + HG II S + + + A++DMY+KCG + A
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+ I S+R+V +WN +I GYG HG GR AL+ F +M + V+P+ IT+ S++SACSH+
Sbjct: 507 LFDMI--SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+DEG + F M + ++P + HY MVD+LGRAG + EA+D I+ MP+ P +V+GA
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGA 624
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
+L AC+IH GE AA LF+L P+ GY VL++NIYA+++KW +V ++R+ M+ KGL
Sbjct: 625 MLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGL 684
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KK SV+E ++ F++ +P K +Y +E + EIK AGY+PD + L DVED
Sbjct: 685 KKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVED 743
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+ +E +LN HSEKLA+AFG++N +P + V KNLRVC DCH+A ++IS + R+IIVRD
Sbjct: 744 DVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRD 803
Query: 663 ANRFHHFEGGTCSCNDYW 680
RFHHF+ G CSC DYW
Sbjct: 804 MQRFHHFKNGICSCGDYW 821
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 186/598 (31%), Positives = 307/598 (51%), Gaps = 34/598 (5%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL+ C + L QI + +GL N+ L K++ ++ YG N A +F I D
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHL-FQTKLVSLFSKYGSINEAARVFEPI--DDKL 111
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
L++TM++ YA N L MR + Y F ++LK C N+ + GK +HG
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+I F ++ + +V+MYAKC Q DD K+FD M RDLVSW +I + Q ++
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL L + Q EG DS+T+V+V A +G ++ +++HGYAI F + + I ++
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY++CG+VE ARL+FD M+++ ++SWNSM+ GY+QNG+ +A+ +F++M P VT
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+ + AC LG + G+ H ++ N+ D ++ N+++ MY+KC +D A ++FN++
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL- 410
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
+ R SWN +I GY +G +AL FS+M G+KPD T S++ A + +
Sbjct: 411 -NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA 469
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLA 491
+ + + + + +VDM + G ++ A FDMI + W A++
Sbjct: 470 KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV----ITWNAMIDG 525
Query: 492 CRIHG-EIAANYLFQ------LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN-KGLK 543
HG AA LF +EP Y +S I A S+ G + E +++ K +K
Sbjct: 526 YGTHGLGRAALDLFDKMKKGAVEPNDITY---LSVISACSHS----GLVDEGLRHFKSMK 578
Query: 544 KPAAF--SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL-SCALH 598
+ S+ YG + A R+ KE + +E+M + + Y L +C +H
Sbjct: 579 QDYGLEPSMDHYGAMVDLLGRAGRI----KEAWDFIENMPISPGITVYGAMLGACKIH 632
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 265/705 (37%), Positives = 425/705 (60%), Gaps = 42/705 (5%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTY-GEPNTARSLFNSIHNDK 72
+LL C + + +QIH+ + +GL N L I + G+ + A SLFNSI ++
Sbjct: 34 KLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSI--EE 91
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
F+WN+MIR + + L + M SG+ NSYTFPF+LK+CA + EGK +
Sbjct: 92 PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQ-------------------------------T 161
H +++ GF+SD ++ +L++MYA+ G+
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
D ++FDEM V+D+VSW MI Y Q + +EAL+LF+ ++ + + TIVSV SA
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
Q + ++ + +L + N+++ MY++CG+++ AR +FD M +RD+ISWN
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
M+ GY EAL LF EM S +P +T L ++ +C +LG+ LG+ H YI +
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKN 391
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ +L +++D+YAKCG++ A +F+ + ++++SWN +I G MHG KA E
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKI--KSLASWNAMICGLAMHGQADKAFE 449
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
FS+M +G++P+ ITF ILSAC HAGL+D G++ F+ M + + P+ +HY CM+D+L
Sbjct: 450 LFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLL 509
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GRAG EA +++ M + P+ ++WG+LL ACR H GE+ A LF+LEP++ G +V
Sbjct: 510 GRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYV 569
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNIYA + KW +V ++R + ++G+KK + IE + F D+V+P +++Y+
Sbjct: 570 LLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYR 629
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
+E + ++K+ G++ D S L+D+++E +E L++HSEKLA+AFG+++ P +++ K
Sbjct: 630 MLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIK 689
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLRVC +CHSA + IS I+ R+II RD NRFHHF+ G+CSCNDYW
Sbjct: 690 NLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 265/705 (37%), Positives = 426/705 (60%), Gaps = 44/705 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTY--GEPNTARSLFNSIHNDK 72
L+K+C +A L+QIHS +GLI+ + + A+II + G+ AR +F+++
Sbjct: 25 LIKTCKSMAQLKQIHSQTICTGLISNPI-VPAQIIAFCCKHELGDMEYARMVFDTMPGPN 83
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
F+WN MI+ Y+ G + +Y M G+ + YT+PF+LK ++ + G+ +
Sbjct: 84 H--FVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H I++ GF S+ +VQ AL+ +Y+ G+ VFD S D+V+W VMI+ Y ++++
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF 201
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+E++ LF + ++ +L S+T+VSV SA +L D+ + VH Y ++N++
Sbjct: 202 DESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENAL 261
Query: 253 VAMYARCGNVEKA-------------------------------RLVFDMMEKRDLISWN 281
+ MYA CG+++ A R FD M +RD +SW
Sbjct: 262 IDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWT 321
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ GY+Q + E L LF EMQ ++ KP+ T + +++AC +LG+ +LG YI +
Sbjct: 322 AMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN 381
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+KID+ + NA++DMY CG+++ A +FN + R+ SW +I G ++G+G +AL+
Sbjct: 382 EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAM--PHRDKISWTAVIFGLAINGYGEEALD 439
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDML 460
FSQML+ + PD +T +L AC+H+G++D+G+K FA MT + ++P V HY CMVD+L
Sbjct: 440 MFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLL 499
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GRAG L EA ++IK MP+ PN VWG+LL ACR+H E+AA + +LEPE+ +V
Sbjct: 500 GRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYV 559
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+ NIYAA N+W ++ ++R+ M ++G+KK S+IE + F D+V+P KE+Y
Sbjct: 560 LLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYS 619
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
K++ M+V++K AGY PD S D+ +E++E + HSEKLA+AFG+++ P +++ K
Sbjct: 620 KLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVK 679
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLR+C DCH + +S +Y R++IVRD RFHHF G+CSC DYW
Sbjct: 680 NLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/678 (39%), Positives = 406/678 (59%), Gaps = 15/678 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ LLK C A L+ +IH L T+ + ++ Y + + A +F+ +
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTG-VVNMYAKCRQIDDAYKMFDRM 208
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WNT+I ++ NG + LEL M+ G +S T VL A A L++
Sbjct: 209 PERDLVS--WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +HG IR GF + AL DMY+KCG + +FD M + +VSW M+ Y Q
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+PE+A+ +F+K +EG+ VTI+ A LGD+ + + VH + D+ +
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
NS+++MY++C V+ A +F+ + R +SWN+M+ GY QNG+ SEAL F EM++
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP+ T + ++ A L + + HG II S + + + A++DMY+KCG + A
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+ I S+R+V +WN +I GYG HG GR AL+ F +M + V+P+ IT+ S++SACSH+
Sbjct: 507 LFDMI--SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+DEG + F M + ++P + HY MVD+LGRAG + EA+D I+ MP+ P +V+GA
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGA 624
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
AC+IH GE AA LF+L P+ GY VL++NIYA+++KW +V ++R+ M+ KGL
Sbjct: 625 XXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGL 684
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KK SV+E ++ F++ +P K +Y +E + EIK AGY+PD + L DVED
Sbjct: 685 KKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVED 743
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+ +E +LN HSEKLA+AFG++N +P + V KNLRVC DCH+A ++IS + R+IIVRD
Sbjct: 744 DVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRD 803
Query: 663 ANRFHHFEGGTCSCNDYW 680
RFHHF+ G CSC DYW
Sbjct: 804 MQRFHHFKNGICSCGDYW 821
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 185/598 (30%), Positives = 306/598 (51%), Gaps = 34/598 (5%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL+ C + L QI + +GL N+ L K++ ++ YG N A +F I D
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHL-FQTKLVSLFSKYGSINEAARVFEPI--DDKL 111
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
L++TM++ YA N L MR + Y F ++LK C N+ + GK +HG
Sbjct: 112 DALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG 171
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+I F ++ + +V+MYAKC Q DD K+FD M RDLVSW +I + Q ++
Sbjct: 172 QLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKK 231
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL L + Q EG DS+T+V+V A +G ++ +++HGYAI F + + I ++
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY++CG+VE ARL+FD M+++ ++SWNSM+ GY+QNG+ +A+ +F++M P VT
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+ + AC LG + G+ H ++ N+ D ++ N+++ MY+KC +D A ++FN++
Sbjct: 352 IMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL- 410
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
+ R SWN +I GY +G +AL FS+M G+KPD T S++ A + +
Sbjct: 411 -NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA 469
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLA 491
+ + + + + +VDM + G ++ A FDMI + W A++
Sbjct: 470 KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV----ITWNAMIDG 525
Query: 492 CRIHG-EIAANYLFQ------LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN-KGLK 543
HG AA LF +EP Y +S I A S+ G + E +++ K +K
Sbjct: 526 YGTHGLGRAALDLFDKMKKGAVEPNDITY---LSVISACSHS----GLVDEGLRHFKSMK 578
Query: 544 KPAAF--SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL-SCALH 598
+ S+ YG + A R+ KE + +E+M + + Y +C +H
Sbjct: 579 QDYGLEPSMDHYGAMVDLLGRAGRI----KEAWDFIENMPISPGITVYGAXXGACKIH 632
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/718 (37%), Positives = 414/718 (57%), Gaps = 43/718 (5%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGL-INQALHLGAKIIIKYTTYGEPN 59
++ P T LL++C + L+Q+H GL N L YG+
Sbjct: 11 LKSFSPPTHPLI-SLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 69
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
AR LF+ I + F+WNTMIR Y+ + LY M R G+ + YTFPF+ K
Sbjct: 70 YARRLFDEI--PEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 127
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
+ + G+ +HG +++ G + +V ALV MY CGQ D VFD D+++W
Sbjct: 128 FTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 187
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
++I+AY + K EE+ LF + + +L +VT+V V SA +L D+ + VH Y
Sbjct: 188 NMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 247
Query: 240 NAFLEDLCIQNSIVAMYARCGN-------------------------------VEKARLV 268
+L ++N+++ MYA CG ++ AR
Sbjct: 248 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNY 307
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
FD M ++D +SW +M+ GYI++ + EAL LF MQ ++ KP+ T + +++AC +LG+
Sbjct: 308 FDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGAL 367
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+LG YI + +K D +RNA++DMY KCGD+D AE++F ++ S+R+ +W +I
Sbjct: 368 ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM--SQRDKFTWTAMIV 425
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVK 447
G ++GHG KAL+ FS ML+ + PD IT+ +LSAC+H GL+D+GRK F MT + ++
Sbjct: 426 GLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 485
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANY 502
P + HY C+VD+L RAG L EA+++I+ MP+ N VWGALL CR++ E+
Sbjct: 486 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 545
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
+ +LEP++ +VL+ NIYAA +W ++ +LR+ M +KG+KK S+IE + F
Sbjct: 546 ILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVA 605
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
DR +P K + K++ M ++K+AGY PD+S D+ +ED+E+ + HSEKLA+AFG+
Sbjct: 606 GDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGL 665
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+N P +++TKNLR+C DCH+ + +S +Y R++IVRD RFHHF+ G CSC DYW
Sbjct: 666 INSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 257/683 (37%), Positives = 418/683 (61%), Gaps = 12/683 (1%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
G ++ FY L+ S A LRQIH+ L GL L K+I ++YG+ AR +
Sbjct: 17 GIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGF-LITKLIHASSSYGDITFARQV 75
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + + F WN +IR Y+ N H + L +YS M+ + +S +S+TFP +LKAC S
Sbjct: 76 FDDL--PRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLS 133
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV--RDLVSWTVM 182
+ G+ VH + R GF +D +VQ L+ +YAKC + VF+ + + R +VSWT +
Sbjct: 134 HLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAI 193
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
++AY Q +P EAL +F + ++ + D V +VSV +A L D+ + +++H +
Sbjct: 194 VSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGL 253
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+ + S+ MYA+CG V A+++FD M+ +LI WN+M++GY +NG A +A+ LF E
Sbjct: 254 ETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHE 313
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M N D +P+ ++ +SAC +GS + R Y+ S+ + D + +A++DM+AKCG
Sbjct: 314 MINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGS 373
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
++ A ++F+ +R+V W+ +I GYG+HG R+A+ + M +GV P+ +TF +L
Sbjct: 374 VECARSVFD--RTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLL 431
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
AC+H+G++ EG F M + P+ +HYAC++D+LGRAG L +A+++IK MP+ P
Sbjct: 432 IACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGV 491
Query: 483 SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+VWGALL AC+ H G+ AA LF ++P +TG++V +SN+YAA+ W V ++R M
Sbjct: 492 TVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRM 551
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
K KGL K S +E ++GF D+ +P ++E+ ++VE + +K G++ + +L
Sbjct: 552 KEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASL 611
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
HD+ DE+ E L HSE++ +A+G+++ +++TKNLR C +CH+A + IS + R+
Sbjct: 612 HDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGRE 671
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I+VRD NRFHHF+ G CSC DYW
Sbjct: 672 IVVRDTNRFHHFKDGVCSCGDYW 694
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/718 (37%), Positives = 414/718 (57%), Gaps = 43/718 (5%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGL-INQALHLGAKIIIKYTTYGEPN 59
++ P T LL++C + L+Q+H GL N L YG+
Sbjct: 32 LKSFSPPTHPLI-SLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQ 90
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
AR LF+ I + F+WNTMIR Y+ + LY M R G+ + YTFPF+ K
Sbjct: 91 YARRLFDEI--PEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKG 148
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
+ + G+ +HG +++ G + +V ALV MY CGQ D VFD D+++W
Sbjct: 149 FTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITW 208
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
++I+AY + K EE+ LF + + +L +VT+V V SA +L D+ + VH Y
Sbjct: 209 NMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKN 268
Query: 240 NAFLEDLCIQNSIVAMYARCGN-------------------------------VEKARLV 268
+L ++N+++ MYA CG ++ AR
Sbjct: 269 CKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNY 328
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
FD M ++D +SW +M+ GYI++ + EAL LF MQ ++ KP+ T + +++AC +LG+
Sbjct: 329 FDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGAL 388
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+LG YI + +K D +RNA++DMY KCGD+D AE++F ++ S+R+ +W +I
Sbjct: 389 ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM--SQRDKFTWTAMIV 446
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVK 447
G ++GHG KAL+ FS ML+ + PD IT+ +LSAC+H GL+D+GRK F MT + ++
Sbjct: 447 GLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIE 506
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANY 502
P + HY C+VD+L RAG L EA+++I+ MP+ N VWGALL CR++ E+
Sbjct: 507 PNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQ 566
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
+ +LEP++ +VL+ NIYAA +W ++ +LR+ M +KG+KK S+IE + F
Sbjct: 567 ILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVA 626
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
DR +P K + K++ M ++K+AGY PD+S D+ +ED+E+ + HSEKLA+AFG+
Sbjct: 627 GDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGL 686
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+N P +++TKNLR+C DCH+ + +S +Y R++IVRD RFHHF+ G CSC DYW
Sbjct: 687 INSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 270/674 (40%), Positives = 407/674 (60%), Gaps = 18/674 (2%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTY---GEPNTARSLFNSIHNDK 72
L+ C ++ L+QIH+ + + L A I+ + G AR +FN I N
Sbjct: 47 LEKCTTMSQLKQIHAQMLRTCLFVDPF--SASKIVAFCALHDSGSLPYARLVFNQIPNPT 104
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+ F N++IR Y N + + Y M G+ + +TFP + K+C ++ EGK +
Sbjct: 105 T--FTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQL 159
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H + GF SD+Y+Q L++MY+ CG KVFD+M + +VSW MI AY Q + P
Sbjct: 160 HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLP 219
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EA+ LF++ + + + +T+V+V +A + D+ A+ VH Y + +++
Sbjct: 220 HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSAL 279
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ +Y +CG AR +F+ M +++L WN M+ G++++ EAL LF+EMQ S K +
Sbjct: 280 MDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDK 339
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT L+ ACT+LG+ +LG+ H YI +++D L A++DMYAKCG +++A +F +
Sbjct: 340 VTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQE 399
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ E++V +W LI G M G G KALE F +M VKPD ITF +L+ACSHAGL++
Sbjct: 400 M--PEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 457
Query: 433 EGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG F M K ++P ++HY CMVDMLGRAG + EA D+I+ MP+ P+ V LL A
Sbjct: 458 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSA 517
Query: 492 CRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIHG E AA L +L+P++ G +VL+SNIY++ W K+RE M + +KKP
Sbjct: 518 CRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPP 577
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S IE G + F D +P E+Y+ ++ M +K AGY+PD S L D++++++E
Sbjct: 578 GCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKE 637
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
+ L+ HSEKLA+AFG+++ TP ++V KNLRVC+DCHSA +FIS +Y R+IIVRD NRF
Sbjct: 638 NELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRF 697
Query: 667 HHFEGGTCSCNDYW 680
HHF G+CSC D+W
Sbjct: 698 HHFTKGSCSCRDFW 711
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 199/398 (50%), Gaps = 5/398 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ L KSC L +Q+H T G + A ++ ++ Y+ G +AR +F+ + N
Sbjct: 143 FPSLFKSCGVLCEGKQLHCHSTKLGFASDA-YIQNTLMNMYSNCGCLVSARKVFDKMVNK 201
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W TMI AYA E ++L+ M + + N T VL ACA + + K
Sbjct: 202 SVVS--WATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQ 259
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH I TG + + +AL+D+Y KCG +F++M ++L W +MI + +
Sbjct: 260 VHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSD 319
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EEAL LF + Q G+ D VT+ S+ A LG + + +H Y D+ + +
Sbjct: 320 YEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTA 379
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MYA+CG++E A VF M ++D+++W +++ G GQ +AL LF EMQ S+ KP+
Sbjct: 380 LVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPD 439
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+T + +++AC++ G G + + N ++ ++DM + G + AE++
Sbjct: 440 AITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLI 499
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
++ P + L++ +HG+ A Q++E
Sbjct: 500 QNM-PMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIE 536
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/686 (38%), Positives = 422/686 (61%), Gaps = 18/686 (2%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
G ++ FY L+ S A L+QIH+ L GL L K+I +++G+ AR +
Sbjct: 17 GIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGF-LITKLIHASSSFGDITFARQV 75
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + + F WN +IR Y+ N H + L +YS M+ + +S +S+TFP +LKAC+ S
Sbjct: 76 FDDL--PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV--RDLVSWTVM 182
+ G+ VH + R GF +D +VQ L+ +YAKC + VF+ + + R +VSWT +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
++AY Q +P EAL +F + ++ + D V +VSV +A L D+ + +++H ++
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA-SVVKMG 252
Query: 243 LE---DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
LE DL I S+ MYA+CG V A+++FD M+ +LI WN+M++GY +NG A EA+ +
Sbjct: 253 LEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F EM N D +P+ ++ +SAC +GS + R + Y+ S+ + D + +A++DM+AK
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG ++ A +F+ +R+V W+ +I GYG+HG R+A+ + M GV P+ +TF
Sbjct: 371 CGSVEGARLVFD--RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+L AC+H+G++ EG F M + P+ +HYAC++D+LGRAG L +A+++IK MP+
Sbjct: 429 GLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P +VWGALL AC+ H GE AA LF ++P +TG++V +SN+YAA+ W V ++R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
MK KGL K S +E ++ F D+ +P ++E+ ++VE + +K G++ +
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKD 608
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
+LHD+ DE+ E L HSE++A+A+G+++ +++TKNLR C +CH+A + IS +
Sbjct: 609 ASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLV 668
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R+I+VRD NRFHHF+ G CSC DYW
Sbjct: 669 DREIVVRDTNRFHHFKDGVCSCGDYW 694
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 273/708 (38%), Positives = 416/708 (58%), Gaps = 47/708 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGL--INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LL +C L SLR IH+ + +GL N AL ++ + + A S+F +I
Sbjct: 39 LLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPN 98
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+WNTM R +A + V L+LY M G+ NSYTFPF+LK+CA + EG+ +
Sbjct: 99 L--LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 156
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------------------- 169
HG +++ G+ D +V +L+ +Y + G+ +D KVFD
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYI 216
Query: 170 --------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
E+ V+D+VSW MI+ Y + +EAL LF++ + + D T+V+V SA
Sbjct: 217 ESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSAC 276
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
Q G + + VH + + F +L I NS++ +Y++CG +E A +F+ + +D+ISWN
Sbjct: 277 AQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWN 336
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+++ GY EALLLF EM S +PN VT L ++ AC +LG+ +GR H YI +
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYI-DK 395
Query: 342 NMKID---ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+K ++LR +++DMYAKCGD++ A +FN I +++SSWN +I G+ MHG
Sbjct: 396 RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAMHGRADA 453
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMV 457
A + FS+M + G++PD ITF +LSACS +G++D GR F MT+ + P+++HY CM+
Sbjct: 454 AFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMI 513
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTG 512
D+LG +G EA +MI M + P+ +W +LL AC+I G + A L ++EPE+ G
Sbjct: 514 DLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPG 573
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
+VL+SNIYA + +W EV K+R + +KG+KK S IE + F D+ +P +E
Sbjct: 574 CYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+Y +E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG+++ P +
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ KNLRVC +CH A + IS IY+R+II RD RFHHF G CSCNDYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/686 (38%), Positives = 421/686 (61%), Gaps = 18/686 (2%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
G ++ FY L+ S A L+QIH+ L GL L K+I +++G+ AR +
Sbjct: 17 GIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGF-LITKLIHASSSFGDITFARQV 75
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + + F WN +IR Y+ N H + L +YS M+ + +S +S+TFP +LKAC+ S
Sbjct: 76 FDDL--PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV--RDLVSWTVM 182
+ G+ VH + R GF +D +VQ L+ +YAKC + VF+ + + R +VSWT +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
++AY Q +P EAL +F ++ + D V +VSV +A L D+ + +++H ++
Sbjct: 194 VSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA-SVVKMG 252
Query: 243 LE---DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
LE DL I S+ MYA+CG V A+++FD M+ +LI WN+M++GY +NG A EA+ +
Sbjct: 253 LEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F EM N D +P+ ++ +SAC +GS + R + Y+ S+ + D + +A++DM+AK
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG ++ A +F+ +R+V W+ +I GYG+HG R+A+ + M GV P+ +TF
Sbjct: 371 CGSVEGARLVFD--RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+L AC+H+G++ EG F M + P+ +HYAC++D+LGRAG L +A+++IK MP+
Sbjct: 429 GLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P +VWGALL AC+ H GE AA LF ++P +TG++V +SN+YAA+ W V ++R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
MK KGL K S +E ++ F D+ +P ++E+ ++VE + +K G++ +
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKD 608
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
+LHD+ DE+ E L HSE++A+A+G+++ +++TKNLR C +CH+A + IS +
Sbjct: 609 ASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLV 668
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R+I+VRD NRFHHF+ G CSC DYW
Sbjct: 669 DREIVVRDTNRFHHFKDGVCSCGDYW 694
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/683 (38%), Positives = 414/683 (60%), Gaps = 15/683 (2%)
Query: 9 EGF-YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+GF + L+++ AS Q+H+ GL+ ++ ++ Y +G + A +F+
Sbjct: 69 DGFTFPSLIRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDE 128
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ + WN M+ N E + L+ M G++ ++ T VL C +
Sbjct: 129 MSERDVPA--WNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQV 186
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
V+H ++ G + +V AL+D+Y K G ++ VF M RDLV+W +I+ E
Sbjct: 187 LALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCE 246
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF-LEDL 246
Q + AL +FQ + G+ D +T+VS+ASA+ Q GD A+++H Y + + ++D+
Sbjct: 247 QRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDI 306
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
N+IV MYA+ N+E A+ +FD M +D +SWN+++TGY+QNG A+EA+ + MQ
Sbjct: 307 IAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKH 366
Query: 307 D-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+ K T + ++ A ++LG+ Q G + H I + +D + ++D+YAKCG L
Sbjct: 367 EGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAE 426
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F + R+ WN +I+G G+HGHG +AL FS+M +EG+KPDH+TF S+L+AC
Sbjct: 427 AMLLFEKM--PRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAAC 484
Query: 426 SHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SHAGL+D+GR F M + P KHYACM DMLGRAG L EAF+ I+ MP+ P+ +V
Sbjct: 485 SHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAV 544
Query: 485 WGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
WGALL ACRIHG ++A+ LF+L+PE+ GY+VLMSN+YA KW V ++R ++
Sbjct: 545 WGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 604
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK--EVYKKVESMAVEIKMAGYMPDLSCAL 597
+ L+K +S IE + + F++ ++ P+ + E+ ++ S+ +I+ GY+ D S L
Sbjct: 605 QNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVL 664
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
DVED+++EH+LN HSE+LA+AFGI+N + + KNLRVC DCH+A ++IS I R+
Sbjct: 665 QDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITERE 724
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
IIVRD+NRFHHF+ G CSC D+W
Sbjct: 725 IIVRDSNRFHHFKDGHCSCGDFW 747
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/707 (38%), Positives = 413/707 (58%), Gaps = 45/707 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGL--INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LL C L SLR IH+ + +GL N AL + + + A S+F++I +
Sbjct: 8 LLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQ--E 65
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+WNTM R +A + V L+LY M G+ NSYTFPF+LK+CA + EG+ +
Sbjct: 66 PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV------------------------- 167
HG +++ GF D Y+ +L+ MY + G+ +D KV
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXI 185
Query: 168 ------FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
FDE+ V+D+VSW I+ Y + +EAL LF+K + + D T+V+V SA
Sbjct: 186 ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSAC 245
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
Q G + + VH + + F +L I N+++ +Y++CG +E A +F + +D+ISWN
Sbjct: 246 AQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWN 305
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+++ GY EALLLF +M S KPN VT L ++SAC +LG+ +GR H YI
Sbjct: 306 TLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKR 365
Query: 342 NMKID--ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ ++LR +++DMYAKCGD++ A+ +F+ + R++SSWN +I G+ MHG A
Sbjct: 366 LKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM--LNRSLSSWNAMIFGFAMHGRANAA 423
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVD 458
+ FS+M + G++PD ITF +LSACSH+G++D GR F MT+ + P+++HY CM+D
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMID 483
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGY 513
+ G +G EA MI M + P+ +W +LL AC++HG + A L ++EPE+ G
Sbjct: 484 LXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGS 543
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+VL+SNIYA + +W EV K R + +KG+KK S IE + F D+ +P +E+
Sbjct: 544 YVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 603
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
Y +E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG+++ P + +
Sbjct: 604 YGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 663
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC +CH A + IS IY+R+II RD RFHHF G CSCNDYW
Sbjct: 664 VKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/678 (39%), Positives = 395/678 (58%), Gaps = 16/678 (2%)
Query: 14 QLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
+LK+C + S +++H + +G A +I+ Y+ G AR LF+ I N
Sbjct: 129 SVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNA-LIMMYSEVGSLALARLLFDKIEN 187
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
S W+TMIR+Y +G E L+L M + + + A + + GK
Sbjct: 188 KDVVS--WSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGK 245
Query: 131 VVHGDIIRTGFLSDSYVQ--AALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
+H ++R G S V AL+DMY KC +VFD +S ++SWT MI AY
Sbjct: 246 AMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIH 305
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
E + LF K EG+ + +T++S+ G G + + +H + + N F L +
Sbjct: 306 CNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVL 365
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+ + MY +CG+V AR VFD + +DL+ W++M++ Y QN EA +F M
Sbjct: 366 ATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGI 425
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+PN T + L+ C GS ++G+ H YI +K D L+ + +DMYA CGD+DTA
Sbjct: 426 RPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHR 485
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F + ++R++S WN +I+G+ MHGHG ALE F +M GV P+ ITF L ACSH+
Sbjct: 486 LFAE--ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHS 543
Query: 429 GLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+ EG++ F M + P+V+HY CMVD+LGRAG L EA ++IK MP+ PN +V+G+
Sbjct: 544 GLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGS 603
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
L AC++H GE AA LEP +GY VLMSNIYA++N+W +V +R MK++G+
Sbjct: 604 FLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGI 663
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
K S IE + F DR +P K+VY+ ++ M +++ AGY PD+SC LH+++
Sbjct: 664 VKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDK 723
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
E + LNYHSEKLA+A+G+++ P +++ KNLRVC+DCH+A + +S IY R+IIVRD
Sbjct: 724 EKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRD 783
Query: 663 ANRFHHFEGGTCSCNDYW 680
NRFHHF+ G+CSC DYW
Sbjct: 784 RNRFHHFKEGSCSCCDYW 801
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 230/460 (50%), Gaps = 17/460 (3%)
Query: 54 TYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTF 113
+Y P A ++S N +SFL I +Y N + ++Y+ MR + +++
Sbjct: 74 SYRVPLAALESYSS--NAAIHSFL----ITSYIKNNCPADAAKIYAYMRGTDTEVDNFVI 127
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
P VLKAC L G+ VHG +++ GF D +V AL+ MY++ G +FD++
Sbjct: 128 PSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIEN 187
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+D+VSW+ MI +Y+++ +EAL L + + + ++S+ + +L D+ +A+
Sbjct: 188 KDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAM 247
Query: 234 HGYAI----CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
H Y + C LC +++ MY +C N+ AR VFD + K +ISW +M+ YI
Sbjct: 248 HAYVMRNGKCGKSGVPLC--TALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIH 305
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
+E + LF +M PN +T L LV C G+ +LG+ H + + + + L
Sbjct: 306 CNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVL 365
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
A +DMY KCGD+ +A ++F+ +++ W+ +I+ Y + +A + F M
Sbjct: 366 ATAFIDMYGKCGDVRSARSVFDSF--KSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGC 423
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
G++P+ T S+L C+ AG ++ G+ + + K +K ++ VDM G + A
Sbjct: 424 GIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTA 483
Query: 470 FDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLFQLE 507
+ + + S+W A++ A HGE A ++E
Sbjct: 484 HRLFAE-ATDRDISMWNAMISGFAMHGHGEAALELFEEME 522
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/650 (38%), Positives = 384/650 (59%), Gaps = 11/650 (1%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
I+ + + +++ Y GE A+ LF + + W+ +I A G+ E L L
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA--WSAIIAALVQTGYPEEALSL 417
Query: 98 YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK 157
+ M+ + N T +L ACA SL+ GK +H ++ SD ALV MYAK
Sbjct: 418 FQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAK 477
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
CG F+ MS RD+V+W +I Y Q P A+ +F K + + D+ T+V V
Sbjct: 478 CGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGV 537
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRD 276
A L D+ + +HG + F D ++N+++ MYA+CG++ A +F+ + +D
Sbjct: 538 VPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKD 597
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
++WN ++ Y+QNG A EA+ F +M+ + PN VT + ++ A YL + + G FH
Sbjct: 598 EVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHA 657
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
II + + N+++DMYAKCG LD +E +FN++ ++ SWN +++GY +HGHG
Sbjct: 658 CIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM--DHKDTVSWNAMLSGYAVHGHG 715
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYAC 455
+A+ FS M E V+ D ++F S+LSAC HAGL++EGRK F M+ K +KP+++HYAC
Sbjct: 716 DRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEH 510
MVD+LGRAG E IK MP+ P+ VWGALL +CR+H GE+A ++L +LEP +
Sbjct: 776 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835
Query: 511 TGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYW 570
+FV++S+IYA S +W + GK R M + GLKK S +E + F D+ +P
Sbjct: 836 PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895
Query: 571 KEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
+ ++ ++ +++ GY+PD SC L +VE+ED+E L HSE+LA+ F ++N P +
Sbjct: 896 ESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGST 955
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+Q+ KNLRVC DCH+ +FIS I R+IIVRDA RFHHFE G CSCNDYW
Sbjct: 956 IQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 244/465 (52%), Gaps = 8/465 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y +LL SC L L QIH+ + SG + H +I Y+ + + + ARS+F+S N
Sbjct: 35 YPRLLSSCKHLNPLLQIHAQIIVSGFKHH--HSITHLINLYSLFHKCDLARSVFDSTPNP 92
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
LWN+MIRAY + E LE+Y M G+ + YTF FVLKAC + EG
Sbjct: 93 SR--ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
HG+I R G D ++ A LVDMY+K G +VFD+M RD+V+W MI Q+E
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P EA+ F+ Q G+ SV+++++ + +L ++ +++HGY F + N
Sbjct: 211 PCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNG 268
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ +Y++CG+V+ AR VFD M +D +SW +M+ GY NG E L LFD+M+ + + N
Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V+A+ A + G++ HG + + D + +M MYAKCG+ + A+ +F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ R++ +W+ +IA G+ +AL F +M + +KP+ +T SIL AC+ L+
Sbjct: 389 GLQG--RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
G+ K + ++ +V M + G A +M
Sbjct: 447 KLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 245/473 (51%), Gaps = 17/473 (3%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
R+ SS ++GLI+ Y+ G+ + AR +F+ + + S W TM+
Sbjct: 257 FRRDFSSAVSNGLIDL-----------YSKCGDVDVARRVFDQMVDQDDVS--WGTMMAG 303
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
YA+NG VE LEL+ M+ + N + A A + +GK +HG ++ SD
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
V L+ MYAKCG+T+ ++F + RDLV+W+ +I A Q PEEAL LFQ+ Q
Sbjct: 364 ILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN 423
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+ + + VT++S+ A L + +++H + + DL ++V+MYA+CG
Sbjct: 424 QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A F+ M RD+++WNS++ GY Q G A+ +F +++ S P+ T + +V AC
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L G HG I+ + D ++NA++DMYAKCG L +AE +FN ++ V +WN
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV-TWN 602
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
V+IA Y +GH ++A+ F QM E P+ +TF S+L A ++ EG A + ++
Sbjct: 603 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM 662
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
++DM + G L + + +M D+V W A+L +HG
Sbjct: 663 GFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM--DHKDTVSWNAMLSGYAVHG 713
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L+S+C +L + H II S K ++ + ++++Y+ D A ++F+
Sbjct: 38 LLSSCKHLNPL---LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPS 93
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
R + WN +I Y +ALE + M+E+G++PD TFT +L AC+ A + EG
Sbjct: 94 RIL--WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWF 151
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
++ + ++ +V A +VDM + G L A ++ +M P D V W A++
Sbjct: 152 HGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM--PKRDVVAWNAMI 202
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 268/678 (39%), Positives = 405/678 (59%), Gaps = 15/678 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ LLK C A LR +IH L +G + + ++ Y A +F+ +
Sbjct: 178 FTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTG-VVNMYAKCRLVEEAYKMFDRM 236
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ WNT+I YA NG LEL M+ G +S T +L A A +
Sbjct: 237 --PERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +HG +R GF S V ALVDMY+KCG +FD M+ + +VSW MI Y Q
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQ 354
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
P A+ +FQK E + +VT++ A LGDV + + VH D+ +
Sbjct: 355 NGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSV 414
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
NS+++MY++C V+ A +F+ ++ + L+SWN+M+ GY QNG+ +EA+ F +MQ +
Sbjct: 415 MNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNI 474
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP+ T + ++ A L + HG +I + + + + A++DMYAKCG + TA
Sbjct: 475 KPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARK 534
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+ + ER+V++WN +I GYG HG G+ ALE F +M +E +KP+ +TF +LSACSH+
Sbjct: 535 LFDMM--DERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL++EG + F M K ++P + HY MVD+LGRA L EA+D I++MP+ P SV+GA
Sbjct: 593 GLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGA 652
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
+L ACRIH GE AAN +F L+P+ GY VL++NIYA ++ W +V ++R M+ KG+
Sbjct: 653 MLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGI 712
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
+K +SV+E ++ F++ +P K++Y +E++ IK AGYMPD + ++HDVED
Sbjct: 713 QKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTN-SVHDVED 771
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+E +LN HSEKLA+AF ++N +P + + KNLRVC DCH+A ++IS + +R+IIVRD
Sbjct: 772 VVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRD 831
Query: 663 ANRFHHFEGGTCSCNDYW 680
RFHHF+ GTCSC DYW
Sbjct: 832 MRRFHHFKDGTCSCGDYW 849
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 164/583 (28%), Positives = 297/583 (50%), Gaps = 29/583 (4%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL+ C + L Q + +GL ++ L K++ + +G + A +F I +
Sbjct: 83 LLELCTSMKELHQFIPLIIKNGLYSEHL-FQTKLVSLFCKFGSLHEAARVFQPIED--KI 139
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
L++TM++ YA N + + + MR G+ Y F ++LK C N+ + +GK +H
Sbjct: 140 DELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHC 199
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+I GF S+ + +V+MYAKC ++ K+FD M RDLV W +I+ Y Q +
Sbjct: 200 QLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKT 259
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL L + Q+EG DS+TIVS+ AV +G + +++HGY++ F + + ++V
Sbjct: 260 ALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVD 319
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY++CG+V ARL+FD M + ++SWNSM+ GY+QNG A+ +F +M + + VT
Sbjct: 320 MYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVT 379
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+ + AC LG + GR H + + D ++ N+++ MY+KC +D A +F ++
Sbjct: 380 VMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ 439
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
+ + SWN +I GY +G +A+++F +M + +KPD T S++ A + ++ +
Sbjct: 440 --HKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQA 497
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLA 491
+ + + + V +VDM + G ++ A FDM+ + + + W A++
Sbjct: 498 KWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHV----TTWNAMIDG 553
Query: 492 CRIHG-EIAANYLFQ------LEPEHTGYFVLMSNIYAAS---NKWREVGKLREDMKNKG 541
HG AA LF+ ++P + ++S + ++ G +++D G
Sbjct: 554 YGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDY---G 610
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
L +PA + YG + A+R+N W + K A+ +
Sbjct: 611 L-EPA---MDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISV 649
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 279/709 (39%), Positives = 410/709 (57%), Gaps = 49/709 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSLFNSIHND 71
L+ C L+Q+H+ + +GL A + P++ A +F+ I
Sbjct: 36 LIDKCANKKHLKQLHAHMLRTGLFFDPP--SATKLFTACALSSPSSLDYACKVFDQIPRP 93
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGK 130
Y+ WNT+IRA+A++ ++ L ++ M S NSYTFPFV+KA S +L G+
Sbjct: 94 NLYT--WNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQ 151
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+HG +++ F SD ++ +L+ Y+ G D VF ++ +D+VSW MI+ + Q
Sbjct: 152 AIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGG 211
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
PEEAL LF++ + E + VT+V V SA + D+ + Y N +L + N
Sbjct: 212 SPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSN 271
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI---------------------- 288
+++ MY +CG++E AR +FD ME++D++SW +M+ GY
Sbjct: 272 AMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITA 331
Query: 289 ---------QNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
QNG+ EAL +F E+Q N + KPN VT ++AC LG+ LG H YI
Sbjct: 332 WNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYI 391
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+K++ + +++DMY+KCG L+ A +F + R+V W+ +IAG MHGHGR
Sbjct: 392 KKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVE--RRDVFVWSAMIAGLAMHGHGRA 449
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMV 457
A++ FS+M E VKP+ +TFT++L ACSH+GL+DEGR F M + V P KHYACMV
Sbjct: 450 AIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMV 509
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTG 512
D+LGRAGCL EA ++I++MP+ P+ SVWGALL ACRI+G E+A + L + + + G
Sbjct: 510 DILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHG 569
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
+VL+SNIYA + KW V +LR+ MK GL+K S IE I F D +P E
Sbjct: 570 AYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTE 629
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDE-DREHMLNYHSEKLAVAFGIMNLTPEAVV 631
+Y K++ + IK GY+ D S L VE+E +EH LN HSEKLA+A+G++ + P +
Sbjct: 630 IYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPI 689
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ KNLRVC DCHS + IS +Y R I++RD RFHHF GG CSC DYW
Sbjct: 690 RIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG--- 361
N++ K NP T IL+ C +++ ++ H +++ + + D + ++ C
Sbjct: 23 NNEQKSNPSTVPILIDKC---ANKKHLKQLHAHMLRTGLFFDPP---SATKLFTACALSS 76
Query: 362 --DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK-PDHITF 418
LD A +F+ I N+ +WN LI + + L F QML E + P+ TF
Sbjct: 77 PSSLDYACKVFDQI--PRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTF 134
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLS 445
++ A + + G+ + K S
Sbjct: 135 PFVIKAATEVSSLLAGQAIHGMVMKAS 161
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 281/708 (39%), Positives = 413/708 (58%), Gaps = 47/708 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT--ARSLFNSIHNDK 72
L+ C+ L+QIH+ + +GL +++I P+ A+ +F+ I +
Sbjct: 41 LIDQCSETKQLKQIHAQMLRTGLFFDPFS-ASRLITAAALSPFPSLDYAQQVFDQIPHPN 99
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKV 131
Y+ WNT+IRAYA++ + ++L ++ M +S + +TFPF++KA + + GK
Sbjct: 100 LYT--WNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKA 157
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
HG +I+ SD ++ +L+ YAKCG+ G +VF + RD+VSW MITA+ Q
Sbjct: 158 FHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGC 217
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
PEEAL LFQ+ + + + + +T+V V SA + D + VH Y N E L + N+
Sbjct: 218 PEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNA 277
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI----------------------- 288
++ MY +CG+VE A+ +FD M ++D++SW +ML GY
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAW 337
Query: 289 --------QNGQASEALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
Q G+ EAL LF E+Q S KP+ VT + +SAC LG+ LG H YI
Sbjct: 338 NALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIK 397
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
MK++ L +++DMY KCGDL A +F+ + ++V W+ +IAG MHGHG+ A
Sbjct: 398 KQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSV--ERKDVFVWSAMIAGLAMHGHGKDA 455
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
+ FS+M E+ VKP+ +TFT+IL ACSH GL++EGR F M + V P VKHYACMVD
Sbjct: 456 IALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVD 515
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LGRAG L EA ++I++MP+ P SVWGALL AC IH E A + L +LEP + G
Sbjct: 516 ILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGA 575
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+VL+SNIYA + KW V LR+ M++ GLKK S IE + F D +P K++
Sbjct: 576 YVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKI 635
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDED-REHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
Y K++ + ++ GY+P+ S L VE+ED +E L HSEKLA+AFG+++ ++
Sbjct: 636 YAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIR 695
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ KNLRVC DCHS + +S +Y R+I++RD RFHHF G CSC DYW
Sbjct: 696 IVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/687 (38%), Positives = 412/687 (59%), Gaps = 15/687 (2%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
RL P F +L +C+ A L R+IH + +GL N +G +I Y G
Sbjct: 124 RLEPDKFTFVS-ILSACSSPAVLNWGREIHVRVMEAGLANDTT-VGNALISMYAKCGSVR 181
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
AR +F+++ + S W T+ AYA +G+ E+L+ Y M + + + T+ VL A
Sbjct: 182 DARRVFDAMASRDEVS--WTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSA 239
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
C S + + +GK +H I+ + + SD V AL MY KCG D +VF+ +S RD+++W
Sbjct: 240 CGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAW 299
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
MI + + + EEA F + +EG+ D T +V SA + G + + + +H A
Sbjct: 300 NTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK 359
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
+ + D+ N+++ MY++ G+++ AR VFD M KRD++SW ++L Y Q E+
Sbjct: 360 DGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTT 419
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F +M K N +T + ++ AC+ + + G++ H ++ + + D + NA+M MY K
Sbjct: 420 FKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFK 479
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG ++ A +F + S R+V +WN LI G G +G G +AL+ + M EG++P+ TF
Sbjct: 480 CGSVEDAIRVFEGM--SMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFV 537
Query: 420 SILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
++LSAC L++EGR+ FA M+K + P KHYACMVD+L RAG L EA D+I +PL
Sbjct: 538 NVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPL 597
Query: 479 PPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKL 533
P+ ++WGALL ACRIH GE AA + +LEP++ G +V +S IYAA+ WR+V KL
Sbjct: 598 KPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKL 657
Query: 534 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
R+ MK +G+KK S IE ++ F D+ +P +E+Y ++E++ ++K GY+PD
Sbjct: 658 RKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDT 717
Query: 594 SCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYI 653
+HD++DE +E + +HSEKLA+A+G+++ P ++++KNLRVC DCH+A +FIS I
Sbjct: 718 RFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKI 777
Query: 654 YRRKIIVRDANRFHHFEGGTCSCNDYW 680
+R+II RDA+RFHHF+ G CSC DYW
Sbjct: 778 TKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/494 (29%), Positives = 256/494 (51%), Gaps = 12/494 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
+ R GP + + Y +LL+SC LA +Q+H + G + +++ ++ Y G
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCG-VKPNVYITNTLLKLYAHCG 77
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
N AR LF+ N S WN MI YA+ G E L++ M++ + + +TF +
Sbjct: 78 SVNEARQLFDKFSNKSVVS--WNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSI 135
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L AC+S +++ G+ +H ++ G +D+ V AL+ MYAKCG D +VFD M+ RD
Sbjct: 136 LSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDE 195
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT + AY ++ EE+L + QE + +T ++V SA G L + K + +H +
Sbjct: 196 VSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAH 255
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ + + D+ + ++ MY +CG + AR VF+ + RD+I+WN+M+ G++ +GQ EA
Sbjct: 256 IVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEA 315
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
F M P+ T ++SAC G G++ H + D NA+++M
Sbjct: 316 HGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINM 375
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y+K G + A +F+ + +R+V SW L+ Y ++ F QML++GVK + I
Sbjct: 376 YSKAGSMKDARQVFDRM--PKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKI 433
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
T+ +L ACS+ + G++ A++ K + ++ ++ M + G + +A + + M
Sbjct: 434 TYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGM 493
Query: 477 PLPPNDSV-WGALL 489
+ D V W L+
Sbjct: 494 SM--RDVVTWNTLI 505
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 147/277 (53%), Gaps = 2/277 (0%)
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
+ Q ++G DS V + + + D+ + VH + + ++ I N+++ +YA
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
CG+V +AR +FD + ++SWN M++GY G A EA LF MQ +P+ T +
Sbjct: 75 HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++SAC+ GR+ H ++ + + D T+ NA++ MYAKCG + A +F+ + +
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAM--AS 192
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
R+ SW L Y G+G ++L+ + ML+E V+P IT+ ++LSAC +++G++
Sbjct: 193 RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQI 252
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
A + + +V+ + M + G +A ++ +
Sbjct: 253 HAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFE 289
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/675 (38%), Positives = 409/675 (60%), Gaps = 26/675 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ G +N + ++ Y G+ +++ L S + WNT++ +
Sbjct: 218 KQVHAYGLRKGELNS--FIINTLVAMYGKMGKLASSKVLLGSFEGRDLVT--WNTVLSSL 273
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD- 144
N +E LE M G+ + +T VL AC+ ++ GK +H ++ G L +
Sbjct: 274 CQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 333
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
S+V +ALVDMY C Q GC+VFD M R + W MIT Y Q E EEAL+LF + ++
Sbjct: 334 SFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEE 393
Query: 205 E-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
GLL++S T+ V A + G K +A+HG+ + D +QN+++ MY+R G ++
Sbjct: 394 SAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKID 453
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ-----------NSDCKPNP 312
A+ +F ME RDL++WN+++TGY+ + + +ALL+ +MQ KPN
Sbjct: 454 IAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNS 513
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+T + ++ +C L + G++ H Y I +N+ D + +A++DMYAKCG L + +F+
Sbjct: 514 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 573
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
I RNV +WNV++ YGMHG+ + A++ M+ +GVKP+ +TF S+ +ACSH+G+++
Sbjct: 574 I--PIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVN 631
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS-VWGALLL 490
EG K F +M K V+P HYAC+VD+LGRAG + EA+ +I +P + + W +LL
Sbjct: 632 EGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLG 691
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRIH GEIAA L QLEP ++VL++NIY+++ W + ++R +MK +G++K
Sbjct: 692 ACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKE 751
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE+G ++ F D +P +++ +E++ ++ GY+PD SC LH+VE++++
Sbjct: 752 PGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEK 811
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +L HSEKLA+AFGI+N +P +++V KNLRVCNDCH A +FIS + R+II+RD R
Sbjct: 812 EILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRR 871
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ GTCSC DYW
Sbjct: 872 FHHFKNGTCSCGDYW 886
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 204/421 (48%), Gaps = 16/421 (3%)
Query: 50 IKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSN 109
+ T YG P S F S + + W ++R+ + E + Y M GI +
Sbjct: 40 VASTVYGAP----SKFISQSHSPEW---WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPD 92
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA-ALVDMYAKCGQTDDGCKVF 168
++ FP +LKA A + GK +H + + G+ DS A LV++Y KCG KVF
Sbjct: 93 NFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVF 152
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG--- 225
D +S R+ VSW +I++ EK E AL F+ E + S T+VSVA A
Sbjct: 153 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPE 212
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+L + VH Y + L I N++VAMY + G + ++++ E RDL++WN++L+
Sbjct: 213 GLLMGKQVHAYGLRKGELNSFII-NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLS 271
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII-NSNMK 344
QN Q EAL EM +P+ T ++ AC++L + G++ H Y + N ++
Sbjct: 272 SLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 331
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
++ + +A++DMY C + + +F+ + +R + WN +I GY + + +AL F
Sbjct: 332 ENSFVGSALVDMYCNCKQVLSGCRVFDGMF--DRKIGLWNAMITGYAQNEYDEEALLLFI 389
Query: 405 QMLEE-GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
+M E G+ + T ++ AC +G + + K + + ++DM R
Sbjct: 390 EMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRL 449
Query: 464 G 464
G
Sbjct: 450 G 450
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/661 (38%), Positives = 392/661 (59%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ +HS + +G L +G ++ Y G R +F + N + WNTMI
Sbjct: 365 KTVHSHILNAGH-ESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA--WNTMIGGL 421
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A G+ E E+Y M+R G+ N T+ +L AC + + + G+ +H +++ GF+ D
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
VQ AL+ MYA+CG D +F++M +D++SWT MI ++ EAL +FQ QQ
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
GL + VT S+ +A + + +H I D + N++V MY+ CG+V+ A
Sbjct: 542 GLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDA 601
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VFD M +RD++++N+M+ GY + EAL LFD +Q KP+ VT + +++AC
Sbjct: 602 RQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANS 661
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
GS + ++ H ++ D +L NA++ YAKCG A +F+ + +RNV SWN
Sbjct: 662 GSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM--MKRNVISWNA 719
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-L 444
+I G HG G+ L+ F +M EG+KPD +TF S+LSACSHAGL++EGR+ F M++
Sbjct: 720 IIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDF 779
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----A 499
+ P ++HY CMVD+LGRAG L E +IK MP N +WGALL ACRIHG + A
Sbjct: 780 GITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERA 839
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A +L+P++ +V +S++YAA+ W KLR+ M+ +G+ K S IE G +
Sbjct: 840 AESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHY 899
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F DR +P +++Y +++ + +KM GY+PD +HDV++ ++E+ + +HSE+LA+A
Sbjct: 900 FVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIA 959
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
+G+++ P +++ KNLRVC DCH+A +FI+ I R+I+ RD NRFHHF+ G CSC DY
Sbjct: 960 YGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDY 1019
Query: 680 W 680
W
Sbjct: 1020 W 1020
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/482 (29%), Positives = 251/482 (52%), Gaps = 9/482 (1%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y ++LK C L + R++H + + + A +I Y G AR ++N +
Sbjct: 144 YMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNA-LINMYIQCGSIEEARQVWNKL 202
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
++ + WN M+ Y G+ E L+L M++ G++ T +L +C S S +
Sbjct: 203 NHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALEC 262
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H + ++ L D V +++MYAKCG + +VFD+M + +VSWT++I Y
Sbjct: 263 GREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYAD 322
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
E A +FQK QQEG++ + +T ++V +A + + VH + + DL +
Sbjct: 323 CGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAV 382
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++V MYA+CG+ + R VF+ + RDLI+WN+M+ G + G EA ++ +MQ
Sbjct: 383 GTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGM 442
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
PN +T +IL++AC + GR+ H ++ D +++NA++ MYA+CG + A
Sbjct: 443 MPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARL 502
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+FN + +++ SW +I G G G +AL F M + G+KP+ +T+TSIL+ACS
Sbjct: 503 LFNKM--VRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSP 560
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVW 485
+D GR+ + + + + +V+M G + +A FD + Q + +++
Sbjct: 561 AALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMI 620
Query: 486 GA 487
G
Sbjct: 621 GG 622
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 200/385 (51%), Gaps = 4/385 (1%)
Query: 94 TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVD 153
+++ +++ G NS + +LK C ++ G+ VH II+ + D Y AL++
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 154 MYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
MY +CG ++ +V++++ + R + SW M+ Y Q EEAL L ++ QQ GL
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
T + + S+ + + +H A+ L D+ + N I+ MYA+CG++ +AR VFD
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
ME + ++SW ++ GY G + A +F +MQ PN +T + +++A + + + G
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ H +I+N+ + D + A++ MYAKCG +F + R++ +WN +I G
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL--VNRDLIAWNTMIGGLA 422
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
G+ +A E + QM EG+ P+ IT+ +L+AC + + GR+ + + K ++
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQM 476
++ M R G + +A + +M
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKM 507
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 145/274 (52%), Gaps = 4/274 (1%)
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+ A+ + Q QQ+G +S + + ++ D++ + VH + I + + D N++
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 253 VAMYARCGNVEKARLVFDMME--KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+ MY +CG++E+AR V++ + +R + SWN+M+ GY+Q G EAL L EMQ
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
T + L+S+C + + GR+ H + + + D + N +++MYAKCG + A +F
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ + ++V SW ++I GY GH A E F +M +EGV P+ IT+ ++L+A S
Sbjct: 303 DKMET--KSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAA 360
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
+ G+ + + + ++ +V M + G
Sbjct: 361 LKWGKTVHSHILNAGHESDLAVGTALVKMYAKCG 394
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/677 (38%), Positives = 403/677 (59%), Gaps = 19/677 (2%)
Query: 15 LLKSCNFLASLRQIHSSLTTS-----GLINQALHLGAKIIIKYTTYGEPNTARSLFNSIH 69
+L+ C L+Q+H+ L + +I +A+ A +++ T + A S+FN H
Sbjct: 27 ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTI----DYALSIFN--H 80
Query: 70 NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
DK S +N MIR A L L+ M + + +TF VLKAC+ + EG
Sbjct: 81 IDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREG 140
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ VH I+++GF S+ +V+ L+ MYA CGQ VFD M R +V+W M++ Y +
Sbjct: 141 EQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKN 200
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+E + LF+K + + D VT++SV A G+L ++ + + Y + + +
Sbjct: 201 GLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLT 260
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
S++ MYA+CG V+ AR +FD M+KRD+++W++M++GY Q + EAL LF EMQ +
Sbjct: 261 TSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVY 320
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN VT + ++ +C LG+ + G+ H YI MK+ TL ++D YAKCG +D + +
Sbjct: 321 PNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEV 380
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F ++ S +NV +W LI G +G G+ ALEFFS MLE VKP+ +TF +LSACSHA
Sbjct: 381 FKEM--SFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHAC 438
Query: 430 LIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+D+GR F M + ++P ++HY CMVD+LGRAG L EA+ I MP PPN VW L
Sbjct: 439 LVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTL 498
Query: 489 LLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L +CR H E + ++ +LEP H+G ++L+SN YA + + ++R +K K +K
Sbjct: 499 LASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIK 558
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K S+IE + F + D + + KE++ ++ M +IK GY+P+ A + E+E
Sbjct: 559 KIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEE 618
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
+E +++HSEKLA+A+G++ +P ++++KNLR+C DCH+A +FIS ++ R IIVRD
Sbjct: 619 SKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDR 678
Query: 664 NRFHHFEGGTCSCNDYW 680
NRFHHF+ G CSCNDYW
Sbjct: 679 NRFHHFKDGLCSCNDYW 695
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 263/709 (37%), Positives = 417/709 (58%), Gaps = 49/709 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKY---TTYGEPNTARSLFNSIHND 71
LL +C L +L+QIHS + +GL N H +I++ + +G+ + A SLF +I N
Sbjct: 34 LLSNCKTLQTLKQIHSQIIKTGLHNT--HFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+WN MIR +++ LE Y M SG N YTFP + K+C EGK
Sbjct: 92 NH--VIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQ 149
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQT------------------------------ 161
VH +++ G +++V +L++MYA+ G+
Sbjct: 150 VHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGF 209
Query: 162 -DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
D+ ++FDE+ VRD+VSW MI+ Y Q+ + EEA+ F++ ++ + + T++SV SA
Sbjct: 210 LDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSA 269
Query: 221 VGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
Q G L+ V + ++ + N ++ MY +CG++E+A +F+ ++ ++++S
Sbjct: 270 CAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVS 329
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN M+ GY EAL LF M S+ PN VT L ++ AC LG+ LG+ H Y+
Sbjct: 330 WNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVD 389
Query: 340 NS--NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ +MK L +++DMYAKCGDL A+ +F+ + + +++++WN +I+G+ MHGH
Sbjct: 390 KNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCM--NTKSLATWNAMISGFAMHGHTD 447
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACM 456
AL FS+M EG PD ITF +L+AC HAGL+ GR+ F+ M + V P++ HY CM
Sbjct: 448 TALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCM 507
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHT 511
+D+ GRAG EA ++K M + P+ ++W +LL ACRIH E A +LF+LEPE+
Sbjct: 508 IDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENP 567
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
+VL+SNIYA + +W +V K+R + + +KK S IE + F D+V+P
Sbjct: 568 SAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSN 627
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
E+YK ++ + + ++ AG++PD S L+D+++E +E +L++HSEKLA+AFG+++ P +
Sbjct: 628 EIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTI 687
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ KNLRVC +CHSA + IS I+ R+II RD NRFHHF+ G+CSC DYW
Sbjct: 688 RIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/707 (38%), Positives = 406/707 (57%), Gaps = 45/707 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGL--INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LL +C L SLR IH+ + +GL N AL + I + A S+F +I
Sbjct: 8 LLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPN 67
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+WNTM R +A + V ++LY M G+ NSYTFPF+LK+CA + EG+ +
Sbjct: 68 L--LIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------------------- 169
HG +++ G+ D YV +L+ MY K G+ D KVFD
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYI 185
Query: 170 --------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
E+ V+D+VSW +I+ Y +EAL LF++ + + D T+V+V SA
Sbjct: 186 ESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSAC 245
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
Q G + + VH + + +L I N+++ +Y++CG VE A +F + +D+ISWN
Sbjct: 246 AQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWN 305
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ GY EALLLF EM S PN VT L ++ AC LG+ GR H YI
Sbjct: 306 TMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKR 365
Query: 342 NMKID--ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ ++LR +++DMYAKCGD++ A +FN +H R +S+ N +I G+ MHG A
Sbjct: 366 IKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMH--HRTLSACNAMIFGFAMHGRANAA 423
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVD 458
+ FS+M + G++PD ITF +LSACSH+G++D GR+ F MT+ + P+++HY CM+D
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMID 483
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGY 513
+LG G EA +MI M + P+ +W +LL AC++HG + A L ++EPE+ G
Sbjct: 484 LLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGS 543
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+VL+SNIYA + +W EV +R + +KG+KK S IE + F D+ +P +E+
Sbjct: 544 YVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 603
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
Y +E M V ++ AG++PD S L ++E+E ++ L +HSEKLA+AFG+++ P + +
Sbjct: 604 YGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTI 663
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC +CH A + IS IY+R+II RD RFHHF G CSCNDYW
Sbjct: 664 VKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/677 (38%), Positives = 399/677 (58%), Gaps = 16/677 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C ++ ++IH + GL ++ + +G +++ Y AR +F+ +
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGL-DRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W+TMIR+ + N LEL M + + ++ A + + GK
Sbjct: 159 DVVS--WSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKA 216
Query: 132 VHGDIIRTGFLSDSYV--QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+H +IR V AL+DMYAKCG ++F+ ++ + +VSWT MI ++
Sbjct: 217 MHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRS 276
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+ EE LF + Q+E + + +T++S+ G G + + +H Y + N F L +
Sbjct: 277 NRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALA 336
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
++V MY +C ++ AR +FD + RD++ W +ML+ Y Q +A LFD+M+ S +
Sbjct: 337 TALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVR 396
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P VT + L+S C G+ LG+ H YI +++D L A++DMYAKCGD++ A +
Sbjct: 397 PTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRL 456
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F I R++ WN +I G+ MHG+G +AL+ F++M +GVKP+ ITF +L ACSHAG
Sbjct: 457 F--IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 514
Query: 430 LIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+ EG+K F M + P+++HY CMVD+LGRAG L EA +MIK MP+ PN VWGAL
Sbjct: 515 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 574
Query: 489 LLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
+ ACR+H GE+AA L ++EPE+ GY VLMSNIYAA+N+W + +R+ MK G+K
Sbjct: 575 VAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMK 634
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K SVIE + F D+ +P + + + + M ++ AGY+PD S L ++++E
Sbjct: 635 KEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEE 694
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
++E L YHSEKLA+AFG+++ P +++ KNLRVCNDCH+A + +S IY R IIVRD
Sbjct: 695 EKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDR 754
Query: 664 NRFHHFEGGTCSCNDYW 680
NRFHHF G CSC DYW
Sbjct: 755 NRFHHFREGYCSCGDYW 771
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 204/389 (52%), Gaps = 5/389 (1%)
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD 169
++ P VLKAC S GK +HG +++ G D +V AL+ MY +C + VFD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
+M RD+VSW+ MI + + ++ + AL L ++ + V +VS+ + ++
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 230 AQAVHGYAICNAFLEDLCIQNS--IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+A+H Y I N+ E + + + ++ MYA+CG++ AR +F+ + ++ ++SW +M+ G
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
I++ + E LF MQ + PN +T L L+ C + G+ QLG++ H YI+ + +
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
L A++DMY KC D+ A +F+ R+V W +++ Y +A F QM
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQ--NRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
GV+P +T S+LS C+ AG +D G+ + + K V+ + +VDM + G +
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDIN 451
Query: 468 EAFDMIKQMPLPPNDSVWGALLLACRIHG 496
A + + + + +W A++ +HG
Sbjct: 452 AAGRLFIE-AISRDICMWNAIITGFAMHG 479
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 251/650 (38%), Positives = 382/650 (58%), Gaps = 11/650 (1%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
I+ + + +++ Y GE A+ LF + + W+ +I A G+ E L L
Sbjct: 360 IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA--WSAIIAALVQTGYPEEALSL 417
Query: 98 YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK 157
+ M+ + N T +L ACA SL+ GK +H ++ SD ALV MYAK
Sbjct: 418 FQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAK 477
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
CG F+ MS RD+V+W +I Y Q P A+ +F K + + D+ T+V V
Sbjct: 478 CGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGV 537
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRD 276
A L D+ + +HG + F D ++N+++ MYA+CG++ A +F+ + +D
Sbjct: 538 VPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKD 597
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
++WN ++ Y+QNG A EA+ F +M+ + PN VT + ++ A YL + + G FH
Sbjct: 598 EVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHA 657
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
II + + N+++DMYAKCG L +E +FN++ ++ SWN +++GY +HGHG
Sbjct: 658 CIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEM--DHKDTVSWNAMLSGYAVHGHG 715
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYAC 455
+A+ FS M E V+ D ++F S+LSAC H GL++EGRK F M+ K +KP+++HYAC
Sbjct: 716 DRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEH 510
MVD+LGRAG E IK MP+ P+ VWGALL +CR+H GE+A ++L +LEP +
Sbjct: 776 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835
Query: 511 TGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYW 570
+FV++S+IYA S +W + GK R M + GLKK S +E + F D+ +P
Sbjct: 836 PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895
Query: 571 KEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
+ ++ ++ +++ GY+PD SC L +VE+ED+E L HSE+LA+ F ++N P +
Sbjct: 896 ESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGST 955
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+Q+ KNLRVC DCH+ +FIS I R+IIVRDA RFHHFE G CSCNDYW
Sbjct: 956 IQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 152/465 (32%), Positives = 244/465 (52%), Gaps = 8/465 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y +LL SC L L QIH+ + SG + H +I Y+ + + + ARS+F+S N
Sbjct: 35 YPRLLSSCKHLNPLLQIHAQIIVSGFKHH--HSITHLINLYSLFHKCDLARSVFDSTPNP 92
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
LWN+MIRAY + E LE+Y M G+ + YTF FVLKAC + EG
Sbjct: 93 SR--ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVW 150
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
HG+I R G D ++ A LVDMY+K G +VFD+M RD+V+W MI Q+E
Sbjct: 151 FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P EA+ F+ Q G+ SV+++++ + +L ++ +++HGY F + N
Sbjct: 211 PCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS--AVSNG 268
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ +Y++CG+V+ AR VFD M +D +SW +M+ GY NG E L LFD+M+ + + N
Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V+A+ A + G++ HG + + D + +M MYAKCG+ + A+ +F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ R++ +W+ +IA G+ +AL F +M + +KP+ +T SIL AC+ L+
Sbjct: 389 GLQG--RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
G+ K + ++ +V M + G A +M
Sbjct: 447 KLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRM 491
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 245/473 (51%), Gaps = 17/473 (3%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
R+ SS ++GLI+ Y+ G+ + AR +F+ + + S W TM+
Sbjct: 257 FRRDFSSAVSNGLIDL-----------YSKCGDVDVARRVFDQMVDQDDVS--WGTMMAG 303
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
YA+NG VE LEL+ M+ + N + A A + +GK +HG ++ SD
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
V L+ MYAKCG+T+ ++F + RDLV+W+ +I A Q PEEAL LFQ+ Q
Sbjct: 364 ILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN 423
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+ + + VT++S+ A L + +++H + + DL ++V+MYA+CG
Sbjct: 424 QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A F+ M RD+++WNS++ GY Q G A+ +F +++ S P+ T + +V AC
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L G HG I+ + D ++NA++DMYAKCG L +AE +FN ++ V +WN
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV-TWN 602
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
V+IA Y +GH ++A+ F QM E P+ +TF S+L A ++ EG A + ++
Sbjct: 603 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM 662
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
++DM + G L + + +M D+V W A+L +HG
Sbjct: 663 GFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEM--DHKDTVSWNAMLSGYAVHG 713
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L+S+C +L + H II S K ++ + ++++Y+ D A ++F+
Sbjct: 38 LLSSCKHLNPL---LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPS 93
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
R + WN +I Y +ALE + M+E+G++PD TFT +L AC+ A + EG
Sbjct: 94 RIL--WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWF 151
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
++ + ++ +V A +VDM + G L A ++ +M P D V W A++
Sbjct: 152 HGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM--PKRDVVAWNAMI 202
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/628 (41%), Positives = 384/628 (61%), Gaps = 14/628 (2%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF + D+ LW M+ YA NG + +E + M G+ N YTFP +L AC
Sbjct: 216 AEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTAC 275
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+S G+ VHG I+++GF S+ YVQ+ALVDMYAKCG + + + M D+VSW
Sbjct: 276 SSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWN 335
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS--AVGQLGDVLKAQAVHGYAI 238
++ + + EEAL LF+ + D T SV + VG + ++VHG I
Sbjct: 336 SLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI----NPKSVHGLII 391
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
F + N++V MYA+ G+++ A VF+ M ++D+ISW S++TGY QN E+L
Sbjct: 392 KTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLK 451
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
+F +M+ + P+ ++SAC L + G++ H I S ++ ++ N+++ MYA
Sbjct: 452 IFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYA 511
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG LD A+ +F + ++V +W +I GY +G GR +L+F+ M+ G +PD ITF
Sbjct: 512 KCGCLDDADAIF--VSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITF 569
Query: 419 TSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+L ACSHAGL+DEGRK F M K+ +KP +HYACM+D+ GR+G L EA ++ QM
Sbjct: 570 IGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMD 629
Query: 478 LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ P+ +VW +LL ACR+H E AA LF+LEP + +V++SN+Y+AS KW +V K
Sbjct: 630 VKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAK 689
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R+ MK+KG+ K S +E + F + DR +P E+Y K++ + + IK AGY+PD
Sbjct: 690 IRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPD 749
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
+S +LHD++ E +E L YHSEKLAVAFG++ P A +++ KNLRVC DCHSA ++IS
Sbjct: 750 MSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISR 809
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ R II+RD+N FHHF G CSC DYW
Sbjct: 810 VFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/512 (29%), Positives = 263/512 (51%), Gaps = 43/512 (8%)
Query: 19 CNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLW 78
C F+A LR IH TT+ ++++ +++ + + G+ N AR LF+ + YS W
Sbjct: 45 CKFMAFLRSIH---TTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYS--W 99
Query: 79 NTMIRAYAN--------------------------NGHC-----VETLELYSTMRRSGIS 107
NTMI +Y N +G+C VE +L+ +MR G
Sbjct: 100 NTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWK 159
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
++ +T VL+ C+S LI G+++HG +++ GF + +V LVDMYAKC + +
Sbjct: 160 ASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFL 219
Query: 168 FD--EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
F E ++ V WT M+T Y Q +A+ F+ +G+ + T ++ +A +
Sbjct: 220 FKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVL 279
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ VHG+ + + F ++ +Q+++V MYA+CG+++ A+ + + ME D++SWNS++
Sbjct: 280 ARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMV 339
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
G++++G EAL LF M + K + T +++ C +GS + HG II + +
Sbjct: 340 GFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFEN 397
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ NA++DMYAK GD+D A +F + E++V SW L+ GY + ++L+ F
Sbjct: 398 YKLVSNALVDMYAKTGDMDCAYTVFEKM--LEKDVISWTSLVTGYAQNNSHEESLKIFCD 455
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M GV PD SILSAC+ L++ G++ D K ++ Y +V M + GC
Sbjct: 456 MRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGC 515
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
L +A + M + + W A+++ +G+
Sbjct: 516 LDDADAIFVSMQV-KDVITWTAIIVGYAQNGK 546
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/661 (38%), Positives = 394/661 (59%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ +HS + +G + +G ++ Y G R +F + N + WNTMI
Sbjct: 247 KAVHSRILNAGHESDTA-VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA--WNTMIGGL 303
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A G+ E E+Y+ M+R G+ N T+ +L AC +++ + GK +H + + GF SD
Sbjct: 304 AEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI 363
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
VQ AL+ MY++CG D VFD+M +D++SWT MI ++ EAL ++Q+ QQ
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQA 423
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + VT S+ +A + + +H + D + N++V MY+ CG+V+ A
Sbjct: 424 GVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDA 483
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VFD M +RD++++N+M+ GY + EAL LFD +Q KP+ VT + +++AC
Sbjct: 484 RQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANS 543
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
GS + R+ H + D ++ NA++ YAKCG A +F + ++RNV SWN
Sbjct: 544 GSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKM--TKRNVISWNA 601
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-L 444
+I G HG G+ AL+ F +M EGVKPD +TF S+LSACSHAGL++EGR+ F M++
Sbjct: 602 IIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDF 661
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----A 499
++ P ++HY CMVD+LGRAG L EA +IK MP N +WGALL ACRIHG + A
Sbjct: 662 AIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERA 721
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A +L+ ++ +V +S++YAA+ W KLR+ M+ +G+ K S I+ G +
Sbjct: 722 AESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHY 781
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F DR +P +++Y +++ + +KM GY+PD +HDV++ ++E+ + +HSE+LA+A
Sbjct: 782 FVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIA 841
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
+G+++ P + + KNLRVC DCH+A +FIS I R+II RD NRFHHF+ G CSC DY
Sbjct: 842 YGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDY 901
Query: 680 W 680
W
Sbjct: 902 W 902
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/485 (30%), Positives = 263/485 (54%), Gaps = 9/485 (1%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
L SC +L R+IH +GL+ + + I+ Y G AR +F+ + +
Sbjct: 132 FLSSCKSPGALEWGREIHFQAMQAGLLFD-VKVANCILNMYAKCGSIEEAREVFDKM--E 188
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
K W I YA+ G E++ M + G+ N T+ VL A +S + + GK
Sbjct: 189 KKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKA 248
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH I+ G SD+ V ALV MYAKCG D +VF+++ RDL++W MI +
Sbjct: 249 VHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGY 308
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EEA ++ + Q+EG++ + +T V + +A + + +H F D+ +QN+
Sbjct: 309 WEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNA 368
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+++MY+RCG+++ ARLVFD M ++D+ISW +M+ G ++G +EAL ++ EMQ + +PN
Sbjct: 369 LISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPN 428
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT +++AC+ + + GR+ H ++ + + DA + N +++MY+ CG + A +F+
Sbjct: 429 RVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFD 488
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +R++ ++N +I GY H G++AL+ F ++ EEG+KPD +T+ ++L+AC+++G +
Sbjct: 489 RM--IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 546
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ R+ + K + +V + G +A + ++M N W A++
Sbjct: 547 EWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNAIIGG 605
Query: 492 CRIHG 496
HG
Sbjct: 606 SAQHG 610
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 242/468 (51%), Gaps = 6/468 (1%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y ++LK C L + RQ+H + + + A +I Y G AR ++ +
Sbjct: 26 YMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNA-LINMYIQCGSIEEARQVWKKL 84
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ WN M+ Y G+ + L+L M++ G++ + T L +C S +
Sbjct: 85 SYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEW 144
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H ++ G L D V +++MYAKCG ++ +VFD+M + +VSWT+ I Y
Sbjct: 145 GREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYAD 204
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ E A +FQK +QEG++ + +T +SV +A + +AVH + D +
Sbjct: 205 CGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAV 264
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++V MYA+CG+ + R VF+ + RDLI+WN+M+ G + G EA ++++MQ
Sbjct: 265 GTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGV 324
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
PN +T +IL++AC + G++ H + + D ++NA++ MY++CG + A
Sbjct: 325 MPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARL 384
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+ + ++V SW +I G G G +AL + +M + GV+P+ +T+TSIL+ACS
Sbjct: 385 VFDKM--VRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSP 442
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
++ GR+ + + + + +V+M G + +A + +M
Sbjct: 443 AALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 205/385 (53%), Gaps = 4/385 (1%)
Query: 94 TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVD 153
+++ +++ G NS + +LK C ++ G+ VH II+ + D Y AL++
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 154 MYAKCGQTDDGCKVFDEMSV--RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
MY +CG ++ +V+ ++S R + SW M+ Y Q E+AL L ++ QQ GL D
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
TI+S S+ G + + +H A+ L D+ + N I+ MYA+CG++E+AR VFD
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
MEK+ ++SW + GY G++ A +F +M+ PN +T + +++A + + + G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ H I+N+ + D + A++ MYAKCG +F + R++ +WN +I G
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL--VNRDLIAWNTMIGGLA 304
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
G+ +A E ++QM EGV P+ IT+ +L+AC ++ + G++ + + K ++
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIG 364
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQM 476
++ M R G + +A + +M
Sbjct: 365 VQNALISMYSRCGSIKDARLVFDKM 389
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/686 (37%), Positives = 406/686 (59%), Gaps = 15/686 (2%)
Query: 4 LGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
L PS F +L +C+ A L +++H+ + T+G ++ +G ++ Y G +
Sbjct: 154 LEPSIITFL-SVLDACSSPAGLNWGKEVHAQVVTAGFVSD-FRIGTALVSMYVKGGSMDD 211
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR +F+ +H +F N M+ YA +G + EL+ M++ G+ N +F +L C
Sbjct: 212 ARQVFDGLHIRDVSTF--NVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGC 269
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ + GK VH + G + D V +L+ MY CG + +VFD M VRD+VSWT
Sbjct: 270 WTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWT 329
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
VMI Y + E+A LF Q+EG+ D +T + + +A ++ A+ +H
Sbjct: 330 VMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIA 389
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F DL + ++V MYA+CG ++ AR VFD M +RD++SW++M+ Y++NG +EA F
Sbjct: 390 GFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETF 449
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
M+ S+ +P+ VT + L++AC +LG+ +G + + I +++ L NA++ M AK
Sbjct: 450 HLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKH 509
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G ++ A +F+ + R+V +WN +I GY +HG+ R+AL F +ML+E +P+ +TF
Sbjct: 510 GSVERARYIFDTM--VRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVG 567
Query: 421 ILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSACS AG +DEGR+ F + + + P VK Y CMVD+LGRAG L EA +IK MP+
Sbjct: 568 VLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVK 627
Query: 480 PNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P S+W +LL+ACRIHG E AA ++P +V +S++YAA+ W V K+R
Sbjct: 628 PTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVR 687
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
+ M+++G++K + IE + F DR +P E+Y ++ + IK GY+P
Sbjct: 688 KVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQ 747
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
LHDV ++ +E ++YHSEKLA+A+G+++L +++ KNLRVC+DCHSA +FIS +
Sbjct: 748 NVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVT 807
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R+II RDA+RFHHF+ G CSC DYW
Sbjct: 808 GREIIARDASRFHHFKDGVCSCGDYW 833
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/497 (30%), Positives = 252/497 (50%), Gaps = 10/497 (2%)
Query: 12 YDQLLKSCNFL--ASL-RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L + C L A+L +Q+ + G L I + Y+ G AR +F+S+
Sbjct: 60 YVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKL-YSICGNVTEARQIFDSV 118
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
N + WN +I YA GH E L+ M G+ + TF VL AC+S + +
Sbjct: 119 ENKTVVT--WNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNW 176
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK VH ++ GF+SD + ALV MY K G DD +VFD + +RD+ ++ VM+ Y +
Sbjct: 177 GKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAK 236
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ E+A LF + QQ GL + ++ +S+ + +AVH + ++D+ +
Sbjct: 237 SGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRV 296
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
S++ MY CG++E AR VFD M+ RD++SW M+ GY +NG +A LF MQ
Sbjct: 297 ATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGI 356
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+P+ +T + +++AC + R+ H + + D + A++ MYAKCG + A
Sbjct: 357 QPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQ 416
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F D P R+V SW+ +I Y +G+G +A E F M ++PD +T+ ++L+AC H
Sbjct: 417 VF-DAMP-RRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHL 474
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
G +D G + + K + V ++ M + G + A + M + + W A+
Sbjct: 475 GALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWNAM 533
Query: 489 LLACRIHGEI-AANYLF 504
+ +HG A YLF
Sbjct: 534 IGGYSLHGNAREALYLF 550
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 193/384 (50%), Gaps = 5/384 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
+S T+ + + C GK V II+ G + Y L+ +Y+ CG + ++F
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
D + + +V+W +I Y Q +EA LF++ EGL +T +SV A +
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+ VH + F+ D I ++V+MY + G+++ AR VFD + RD+ ++N M+ GY
Sbjct: 176 WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYA 235
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
++G +A LF MQ KPN ++ L ++ C + G+ H +N+ + D
Sbjct: 236 KSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIR 295
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ +++ MY CG ++ A +F+++ R+V SW V+I GY +G+ A F+ M E
Sbjct: 296 VATSLIRMYTTCGSIEGARRVFDNMKV--RDVVSWTVMIEGYAENGNIEDAFGLFATMQE 353
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
EG++PD IT+ I++AC+ + ++ R+ + + ++ +V M + G + +
Sbjct: 354 EGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKD 413
Query: 469 AFDMIKQMPLPPNDSV-WGALLLA 491
A + M P D V W A++ A
Sbjct: 414 ARQVFDAM--PRRDVVSWSAMIGA 435
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 277/708 (39%), Positives = 412/708 (58%), Gaps = 47/708 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI---IIKYTTYGEPNTARSLFNSIHND 71
LL +C L SLR IH+ + GL N L I I+ G P A S+F +I
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP-YAISVFKTIQEP 97
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+WNTM R +A + V L+LY M G+ NSYTFPFVLK+CA + EG+
Sbjct: 98 NL--LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD---------------------- 169
+HG +++ G D YV +L+ MY + G+ +D KVFD
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 170 ---------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
E+ V+D+VSW MI+ Y + +EAL LF+ + + D T+V+V SA
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
Q G + + VH + + F +L I N+++ +Y++CG +E A +F+ + +D+ISW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N+++ GY EALLLF EM S PN VT L ++ AC +LG+ +GR H YI
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 341 SNMKID--ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ ++LR +++DMYAKCGD++ A +FN I +++SSWN +I G+ MHG
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAMHGRADA 453
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMV 457
+ + FS+M + G++PD ITF +LSACSH+G++D GR F MT+ + P+++HY CM+
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTG 512
D+LG +G EA +MI M + P+ +W +LL AC++HG + A L ++EPE+ G
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
+VL+SNIYA++ +W EV K R + +KG+KK S IE + F D+ +P +E
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+Y +E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG+++ P +
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ KNLRVC +CH A + IS IY+R+II RD RFHHF G CSCNDYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/669 (39%), Positives = 405/669 (60%), Gaps = 19/669 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSLFNSIHNDKSYSFLW 78
++ L+QIH+ + +GL A I+ + + E + AR +F+ I N SY+
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPF--TASKIVAFCSLQESGSLQYARLVFSQIPNPTSYT--C 56
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N++IR + E L Y M G+ + YTFP + K+C ++S EGK +H +
Sbjct: 57 NSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTK 113
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF SD+Y Q L++MY+ CG KVFD+M + +VSW MI + Q ++P EA+ L
Sbjct: 114 LGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRL 173
Query: 199 FQKT-QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
F + + E + + VT+V+V +A + D+ + +H Y + F + + ++ +Y
Sbjct: 174 FDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYC 233
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG V+ AR +FD ++++L SWN M+ G++++ EALLLF EMQ K + VT
Sbjct: 234 KCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMAS 293
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L+ ACT+LG+ +LG+ H YI + +D L A++DMYAKCG ++TA +F+++ E
Sbjct: 294 LLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEM--PE 351
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
++V +W LI G M G AL++F +M +GVKPD ITF +L+ACSHAG +DEG
Sbjct: 352 KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISH 411
Query: 438 FADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
F M+ ++P ++HY +VD+LGRAG + EA ++IK MP+ P+ V G LL ACRIHG
Sbjct: 412 FNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHG 471
Query: 497 -----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
E AA L +++P H+G +VL+SNIY +S KW E + RE M +G++KP S I
Sbjct: 472 NLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQI 531
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E + F D + E+ + +E M ++K AGY+PD S L D+ +E++E L+
Sbjct: 532 EVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSL 591
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSEKLA+AFG+++ + ++V KNLR+C+DCHSA + IS +Y R+IIVRD NRFHHF+
Sbjct: 592 HSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKD 651
Query: 672 GTCSCNDYW 680
GTCSC +W
Sbjct: 652 GTCSCRGFW 660
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/675 (38%), Positives = 399/675 (59%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL+ C L SL R++H+++ SG I +L ++ Y G AR +F+ I +
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSG-IQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDR 160
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W MI A+ +E + Y TM+ +G + TF +L A + L+ G+
Sbjct: 161 NIVS--WTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH +I + G + V +LV MYAKCG +FD++ +++V+WT++I Y Q +
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ AL L +K QQ + + +T S+ + + VH Y I + + ++ + N+
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY +CG +++AR +F + RD+++W +M+TGY Q G EA+ LF MQ KP+
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPD 398
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T +++C+ Q G+ H ++++ +D L++A++ MYAKCG +D A +FN
Sbjct: 399 KMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFN 458
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ SERNV +W +I G HG R+ALE+F QM ++G+KPD +TFTS+LSAC+H GL+
Sbjct: 459 QM--SERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLV 516
Query: 432 DEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EGRK F M +KP V+HY+C VD+LGRAG L EA ++I MP P SVWGALL
Sbjct: 517 EEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLS 576
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRIH GE AA + +L+P+ G +V +SNIYAA+ ++ + K+R+ M+ + + K
Sbjct: 577 ACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKE 636
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + FH D+ +P KE+Y ++ + +IK GY+PD LHDV++E +
Sbjct: 637 PGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQK 696
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
L HSE+LA+ +G+M P +++ KNLRVC DCH+A +FIS + R+II RDA+R
Sbjct: 697 VQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHR 756
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G CSC D+W
Sbjct: 757 FHHFVDGVCSCGDFW 771
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 224/426 (52%), Gaps = 7/426 (1%)
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
G E L + +TM G S F +L+ CA + +G+ VH I+++G + Y
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
++ L+ MYAKCG D +VFD + R++VSWT MI A+ + EA ++ + G
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAG 192
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKA 265
D VT VS+ +A + Q VH I A LE + + S+V MYA+CG++ KA
Sbjct: 193 CKPDKVTFVSLLNAFTNPELLQVGQKVH-MEIAKAGLELEPRVGTSLVGMYAKCGDISKA 251
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+++FD + ++++++W ++ GY Q GQ AL L ++MQ ++ PN +T ++ CT
Sbjct: 252 QVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTP 311
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G+K H YII S + + NA++ MY KCG L A +F D+ R+V +W
Sbjct: 312 LALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDL--PHRDVVTWTA 369
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
++ GY G +A++ F +M ++G+KPD +TFTS L++CS + EG+ +
Sbjct: 370 MVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAG 429
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AANYL 503
+V + +V M + G + +A + QM N W A++ C HG A Y
Sbjct: 430 YSLDVYLQSALVSMYAKCGSMDDARLVFNQMS-ERNVVAWTAMITGCAQHGRCREALEYF 488
Query: 504 FQLEPE 509
Q++ +
Sbjct: 489 EQMKKQ 494
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/663 (39%), Positives = 397/663 (59%), Gaps = 47/663 (7%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A S+F +I +WNTM+R +A++ V LE+Y M G NSY+FPF+LK+C
Sbjct: 17 AISVFETIQEPNL--LIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSC 74
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG--------------C- 165
A + EG+ +H +++ G D YV +L+ MYA+ G +D C
Sbjct: 75 AKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCT 134
Query: 166 ----------------KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
KVFDE++ RD+VSW MIT Y + + EEAL LF++ + +
Sbjct: 135 ALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRP 194
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAIC----NAFLEDLCIQNSIVAMYARCGNVEKA 265
D T+VSV SA Q G + + VH + + F L I N+++ +Y++CG+VE A
Sbjct: 195 DEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETA 254
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+F+ + +D++SWN+++ GY EALLLF EM S PN VT L ++ AC +L
Sbjct: 255 FGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHL 314
Query: 326 GSRQLGRKFHGYIINSNMKI--DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
G+ +GR H YI + + +LR +++DMYAKCGD++ A +FN + R++SSW
Sbjct: 315 GAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSM--LYRSLSSW 372
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I G+ MHG A + FS+M V+PD ITF +LSACSH+GL+D GR+ F MT+
Sbjct: 373 NAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQ 432
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG--EIAA 500
++ P+++HY CM+D+LG +G EA +MI MP+ P+ +W +LL AC+ HG E+A
Sbjct: 433 DYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAE 492
Query: 501 NY---LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
++ L ++EPE++G +VL+SNIYA + +W +V ++R + KG+KK S IE +
Sbjct: 493 SFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVV 552
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D+++P +E+Y +E M V+++ AG+ PD S L ++E+E +E L +HSEKLA
Sbjct: 553 HEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLA 612
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+AFG+++ P + + KNLRVC +CH A + IS IY+R+I+ RD RFHHF G CSC
Sbjct: 613 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCC 672
Query: 678 DYW 680
DYW
Sbjct: 673 DYW 675
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/676 (38%), Positives = 401/676 (59%), Gaps = 15/676 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL+ C L SL R++H+++ SG I +L ++ Y G AR +F+SI +
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSG-IQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDR 111
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W MI A+ +E + Y TM+ +G + TF +L A + L+ G+
Sbjct: 112 NIVS--WTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH +I+ G + V +LV MYAKCG +FD + +++V+WT++I Y Q +
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQ 229
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ AL L + QQ + + +T S+ + + VH Y I + + +L + NS
Sbjct: 230 VDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNS 289
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY +CG +E+AR +F + RD+++W +M+TGY Q G EA+ LF MQ KP+
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPD 349
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T ++++C+ Q G++ H ++++ +D L++A++ MYAKCG +D A +FN
Sbjct: 350 KMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFN 409
Query: 372 DIHPSERNVSSWNVLIAG-YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ SERNV +W +I G HG R+ALE+F QM ++G+KPD +TFTS+LSAC+H GL
Sbjct: 410 QM--SERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGL 467
Query: 431 IDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++EGRK F M +KP V+HY+C VD+LGRAG L EA ++I MP P SVWGALL
Sbjct: 468 VEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALL 527
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+H GE AA + +L+P+ G +V +S+IYAA+ ++ + K+R+ M+ + + K
Sbjct: 528 SACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVK 587
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE + FH D+ +P +++Y ++ + +IK GY+PD LHDV++E
Sbjct: 588 EPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQ 647
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E +L HSE+LA+ +G+M P +++ KNLRVC DCH+A +FIS + R+II RDA
Sbjct: 648 KERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQ 707
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC D+W
Sbjct: 708 RFHHFADGVCSCGDFW 723
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 218/407 (53%), Gaps = 5/407 (1%)
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
G E L + +TM G S F +L+ CA + +G+ VH I+++G + Y
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
++ L+ MYAKCG D +VFD + R++VSWT MI A+ K EA ++ + G
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKA 265
D VT VS+ +A + Q VH I A LE + + S+V MYA+CG++ KA
Sbjct: 144 CKPDKVTFVSLLNAFTNPELLQLGQKVH-MEIVEAGLELEPRVGTSLVGMYAKCGDISKA 202
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R++FD + ++++++W ++ GY Q GQ AL L + MQ ++ PN +T ++ CT
Sbjct: 203 RVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTP 262
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G+K H YII S + + N+++ MY KCG L+ A +F+D+ R+V +W
Sbjct: 263 AALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDL--PHRDVVTWTA 320
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
++ GY G +A+ F +M ++G+KPD +TFTS+L++CS + EG++ +
Sbjct: 321 MVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAG 380
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
+V + +V M + G + +A + QM N W A++ C
Sbjct: 381 YNLDVYLQSALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGC 426
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 274/709 (38%), Positives = 412/709 (58%), Gaps = 49/709 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI---IIKYTTYGEPNTARSLFNSIHND 71
LL +C L SLR IH+ + +GL N L I ++ G P A S+F +I
Sbjct: 8 LLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLP-YAISVFETIQEP 66
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+WNTM R +A + V L LY M G+ N YTFPF+LK+CA + EG+
Sbjct: 67 NL--LIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQ 124
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD---------------------- 169
+HG +++ G+ D YV +L+ MY + G+ +D KVFD
Sbjct: 125 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 184
Query: 170 ---------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
E+ ++D+VSW MI+ Y + +EAL LF++ + + D T+VSV SA
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 244
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
Q + + VH + + F +L I N+++ +Y +CG VE A +F+ + +D+ISW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 304
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N+++ GY EALLLF EM S PN VT L ++ AC +LG+ ++GR H YI N
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYI-N 363
Query: 341 SNMKIDA---TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+K A + R +++DMYAKCGD++ A+ +F+ I R++SSWN +I G+ MHG
Sbjct: 364 KRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI--LNRSLSSWNAMIFGFAMHGRAN 421
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACM 456
A + FS+M + ++PD ITF +LSACSH+G++D GR F M + + P+++HY CM
Sbjct: 422 AAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCM 481
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHT 511
+D+LG +G EA +MI M + P+ +W +LL AC+++ GE A L ++EP++
Sbjct: 482 IDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNP 541
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G +VL+SNIYA + +W EV K+R + +KG+KK S IE + F D+ +P +
Sbjct: 542 GSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 601
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
E+Y +E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG+++ P +
Sbjct: 602 EIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 661
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ KNLRVC +CH A + IS IY+R+II RD RFHHF G CSCNDYW
Sbjct: 662 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/659 (39%), Positives = 395/659 (59%), Gaps = 43/659 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A S+F +I +WNTM+R YA + V L+LY M G+ NSYTFPF+LK+C
Sbjct: 19 AISVFATIQEPNQ--LIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSC 76
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------- 169
A + EG+ +HG +++ G+ D YV +L+ MYA+ G+ +D KVFD
Sbjct: 77 AKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYT 136
Query: 170 --------------------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
E+ V+D+VSW MI+ Y + +EAL LF++ + +
Sbjct: 137 ALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRP 196
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D T+V+V SA Q V + VH + + F +L I N+++ +Y++CG VE A +F
Sbjct: 197 DEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLF 256
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+ + +D++SWN+++ GY EALLLF EM S PN VT + ++ AC +LG+
Sbjct: 257 EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAID 316
Query: 330 LGRKFHGYIINSNMKID--ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
+GR H YI + +LR +++DMYAKCGD++ A +FN + +++SSWN +I
Sbjct: 317 IGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM--LHKSLSSWNAMI 374
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSV 446
G+ MHG + FS+M + G++PD ITF +LSACSH+G +D GR F MT+ +
Sbjct: 375 FGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDI 434
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG--EIAANY-- 502
P+++HY CM+D+LG +G EA +MIK MP+ P+ +W +LL ACR HG E+A ++
Sbjct: 435 TPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFAR 494
Query: 503 -LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
L ++EPE+ G +VL+SNIYA + +W EV K+R + KG+KK S IE ++ F
Sbjct: 495 NLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFI 554
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
D+++P +E+Y +E M ++ AG++PD S L ++E+E +E L +HSEKLA+AFG
Sbjct: 555 VGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 614
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ P + + KNLRVC +CH A + +S IY+R+II RD RFHHF G CSCND+W
Sbjct: 615 LISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 271/709 (38%), Positives = 416/709 (58%), Gaps = 48/709 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI--IIKYTTYGEPNTARSLFNSIHNDK 72
L+ C+ L L+Q H+ + +G+ + + +K+ I +++ AR +F+ I +
Sbjct: 37 LIDRCSSLRQLKQTHAHMIRTGMFSDP-YSASKLFAIAALSSFASLEYARKVFDEI--PQ 93
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTM--RRSGISSNSYTFPFVLKACASNSLILEGK 130
SF WNT+IRAYA+ V ++ + M S N YTFPF++KA A S + G+
Sbjct: 94 PNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 153
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+HG I++ SD +V +L+ Y CG D CKVF + +D+VSW MI + Q
Sbjct: 154 SLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 213
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
P++AL LF+K + E + + VT+V V SA ++ D+ + V Y N +L + N
Sbjct: 214 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLAN 273
Query: 251 SIVAMYARCGNVEKARLVFDMME-------------------------------KRDLIS 279
+++ MY +CG++E A+ +FD ME K+D+++
Sbjct: 274 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVA 333
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
WN++++ Y QNG+ +EALL+F E+Q + K N +T + +SAC +G+ +LGR H YI
Sbjct: 334 WNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYI 393
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ +K++ + +A++ MY+KCGDL+ A +FN + +R+V W+ +I G MHG G +
Sbjct: 394 KKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVE--KRDVFVWSAMIGGLAMHGCGSE 451
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMV 457
A++ F +M E VKP+ +TFT++ ACSH GL+DE F M + + PE KHYAC+V
Sbjct: 452 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIV 511
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTG 512
D+LGR+G L +A I+ MP+PP+ SVWGALL AC+IH E+A L +LEP + G
Sbjct: 512 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDG 571
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
VL+SNIYA S KW V +LR+ M+ GLKK S IE I F + D +P ++
Sbjct: 572 AHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 631
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDED-REHMLNYHSEKLAVAFGIMNLTPEAVV 631
VY K+ + ++K GY P++S L +E+E+ +E LN HSEKLA+ +G+++ +
Sbjct: 632 VYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAI 691
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+V KNLR+C DCH+ + IS +Y R+IIVRD RFHHF G CSCND+W
Sbjct: 692 RVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/710 (37%), Positives = 416/710 (58%), Gaps = 48/710 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKII--IKYTTYGEPNTARSLFNSIHNDK 72
LL C + SL+QIHS + SGL N L +K+I + + + A SLF+SIH+
Sbjct: 31 LLAKCPDIPSLKQIHSLIIKSGLHN-TLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQP 89
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
F+WNT+IRA++ +L L+S M SG+ NS+TFP + K+CA + E K +
Sbjct: 90 PNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQL 149
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQ-------------------------------T 161
H ++ +V +L+ MY++ G+
Sbjct: 150 HAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHV 209
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
DD ++FDE+ +D+VSW MI Y Q+ + EEAL F + Q+ + + T+VSV SA
Sbjct: 210 DDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSAC 269
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
G L + + + + F ++L + N++V MY++CG + AR +FD ME +D+I WN
Sbjct: 270 GHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWN 329
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ GY EAL+LF+ M + PN VT L ++ AC LG+ LG+ H YI +
Sbjct: 330 TMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYI-DK 388
Query: 342 NMKIDATLRN-----AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
N+K + N +++ MYAKCG ++ AE +F + R+++SWN +I+G M+GH
Sbjct: 389 NLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSM--GSRSLASWNAMISGLAMNGHA 446
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYAC 455
+AL F +M+ EG +PD ITF +LSAC+ AG ++ G + F+ M K + P+++HY C
Sbjct: 447 ERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGC 506
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEH 510
M+D+L R+G EA ++ M + P+ ++WG+LL ACRIHG++ A LF+LEPE+
Sbjct: 507 MIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPEN 566
Query: 511 TGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYW 570
+G +VL+SNIYA + +W +V K+R + +KG+KK + IE + F D+ +P
Sbjct: 567 SGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQS 626
Query: 571 KEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
+ +++ ++ + ++ G++PD S L+D+++E +E L HSEKLA+AFG+++ P +
Sbjct: 627 ENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGST 686
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLRVC +CHSA + IS I+ R+II RD NRFHHF+ G CSCND W
Sbjct: 687 IRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 269/692 (38%), Positives = 409/692 (59%), Gaps = 17/692 (2%)
Query: 1 MRRL--GPSTEGF-YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTT 54
M RL G T+ F Y ++LK C L + +Q+H + S + Q H+ ++ Y
Sbjct: 17 MNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRM-EQNAHVMNNLLHVYIE 75
Query: 55 YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
G AR +F+++ S WN MI Y + H + + L+ M G+ N+ T+
Sbjct: 76 CGRLQEARCVFDALVKKSGAS--WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYM 133
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
+LKACAS S + GK VH I G SD V AL+ MY KCG ++ ++FD +
Sbjct: 134 IILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNH 193
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
D++SWTVMI AY Q+ +EA L + +QEG +++T VS+ +A G + + VH
Sbjct: 194 DIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVH 253
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
+A+ D+ + ++V MYA+ G+++ AR+VFD M+ RD++SWN M+ + ++G+
Sbjct: 254 RHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EA LF +MQ CKP+ + L +++AC G+ + +K H + ++S +++D + A++
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALV 373
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
MY+K G +D A +F+ + RNV SWN +I+G HG G+ ALE F +M GVKPD
Sbjct: 374 HMYSKSGSIDDARVVFDRMKV--RNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPD 431
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+TF ++LSACSHAGL+DEGR + MT++ ++P+V H CMVD+LGRAG L EA I
Sbjct: 432 RVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFI 491
Query: 474 KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
M + P+++ WGALL +CR + GE+ A +L+P++ +VL+SNIYA + KW
Sbjct: 492 DNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWD 551
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
V +R M+ +G++K S IE I F AD +P KE+ + + + +IK G
Sbjct: 552 MVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEG 611
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y+PD L + +D+E + HSEKLA+ +G+M+ P ++V KNLRVC DCH A +
Sbjct: 612 YIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGATK 671
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS + R+IIVRDANRFHHF+ G CSC DYW
Sbjct: 672 LISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 187/363 (51%), Gaps = 9/363 (2%)
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ A EA+++ Q GL++DS V V + D++ A+ VH I + ++
Sbjct: 4 QTANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNA 63
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N+++ +Y CG +++AR VFD + K+ SWN+M+ GY+++ A +A+ LF EM +
Sbjct: 64 HVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHE 123
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+PN T +I++ AC L + + G++ H I + ++ D + A++ MY KCG ++ A
Sbjct: 124 GVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEA 183
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F+++ ++ SW V+I Y G+G++A QM +EG KP+ IT+ SIL+AC+
Sbjct: 184 RRIFDNL--MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACA 241
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
G + ++ ++ +V+ +V M ++G + +A + +M + S W
Sbjct: 242 SEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVS-WN 300
Query: 487 ALLLACRIHGEIAANYLFQLEPEHTG------YFVLMSNIYAASNKWREVGKLREDMKNK 540
++ A HG Y L+ + G F+ + N A++ V K+ +
Sbjct: 301 VMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDS 360
Query: 541 GLK 543
GL+
Sbjct: 361 GLE 363
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/663 (39%), Positives = 399/663 (60%), Gaps = 12/663 (1%)
Query: 24 SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
++ +IH+ + +G+ + AK+I Y G +AR +F+ + + WN MI
Sbjct: 22 TIAKIHALMILTGIFGHG-NSNAKLIQSYARLGHIESARQVFDK--SPQCGVDAWNAMII 78
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS 143
AY+ G E L LY M G+ +S T+ VLKAC + + G+ + G+
Sbjct: 79 AYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGD 138
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D +V AA++++YAKCG+ D+ +VFD+M RDLV WT MIT Q + EA+ ++++
Sbjct: 139 DVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMH 198
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
++ + D V ++ + A LG ++HGY I + D+ +Q S+V MYA+ G++E
Sbjct: 199 KKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLE 258
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
A VF M +++ISW+++++G+ QNG A AL L +MQ+ KP+ V+ + ++ AC+
Sbjct: 259 LASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACS 318
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+G +LG+ HGYI+ + D AV+DMY+KCG L A +F+ I S R+ SW
Sbjct: 319 QVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQI--SFRDSISW 375
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT- 442
N +IA YG+HG G +AL F QM E VKPDH TF S+LSA SH+GL+++GR F+ M
Sbjct: 376 NAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVN 435
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GE 497
+ ++P KHYACMVD+L RAG + EA ++I+ M P ++W ALL C H GE
Sbjct: 436 EYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGE 495
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+AA + +L P+ G + L+SN +A + +W EV ++R+ MK G+KK +SV+E +
Sbjct: 496 MAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKL 555
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D+ + ++E+ + + + E+K GY+P LH++E+E +E ML HSE+LA
Sbjct: 556 HAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLA 615
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+AFG++N P + +TKNLRVC DCH A +FIS I R+I+VRD RFHHF+ G CSC
Sbjct: 616 IAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCG 675
Query: 678 DYW 680
DYW
Sbjct: 676 DYW 678
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/677 (38%), Positives = 406/677 (59%), Gaps = 15/677 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++C + R++H ++ S L +II Y+ G P+ +R +F+ +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR-- 168
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGK 130
+ F WN ++ AY N + + ++S + + +++T P V+KACA + G+
Sbjct: 169 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 228
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK-VFDEMSVRDLVSWTVMITAYEQA 189
++HG + +SD +V AL+ MY KCG ++ K VFD M + + SW ++ Y Q
Sbjct: 229 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQN 288
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
P +AL L+ + GL D TI S+ A ++ + + +HG+A+ N D I
Sbjct: 289 SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIG 348
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
S++++Y CG A+++FD ME R L+SWN M+ GY QNG EA+ LF +M + +
Sbjct: 349 ISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ 408
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P + + + AC+ L + +LG++ H + + +++ D + ++++DMYAK G + ++ +
Sbjct: 409 PYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRI 468
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F+ + E++V+SWNV+IAGYG+HG G++ALE F +ML G+KPD TFT IL ACSHAG
Sbjct: 469 FDRLR--EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAG 526
Query: 430 LIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+++G + F M L +++P+++HY C+VDMLGRAG + +A +I++MP P+ +W +L
Sbjct: 527 LVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSL 586
Query: 489 LLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L +CRIHG E AN L +LEPE +VL+SN++A S KW +V ++R MK+ GL+
Sbjct: 587 LSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQ 646
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K A S IE G + F D + P +EV + + V+I GY PD LHD+E+E
Sbjct: 647 KDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEE 706
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
D+ +L HSEKLA++FG++N V+V KNLR+C DCH+A +FIS + R I+VRD
Sbjct: 707 DKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDN 766
Query: 664 NRFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 767 KRFHHFRDGICSCGDYW 783
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/682 (39%), Positives = 398/682 (58%), Gaps = 50/682 (7%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALH----LGAKIIIKYTTYGEPNTARS 63
TE +++L +L+++HS + LI+Q LH LG K++ Y GEP R
Sbjct: 37 TEDLCNKILDVNPDAKTLKKLHSKI----LIDQNLHPNPSLGIKLMRAYAACGEPCYTRH 92
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+ I DK+ F +N MIR+Y NNG + L ++ TM G ++YT+P VLKAC+ +
Sbjct: 93 IFDEI-TDKNVVF-FNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVS 150
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ G +HG +++ G + Y+ LV MY KC D +V DEM RD+VSW M+
Sbjct: 151 GNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMV 210
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
Y Q + +AL L ++ + L D+ G +G +L A
Sbjct: 211 AGYAQNGRFNDALKLCREMEDLKLKPDA----------GTMGSLLPA------------- 247
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ N+ C NV + +F ++++ LISWN M+ Y+ N +EA+ L+ +M
Sbjct: 248 ----VTNT------SCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQM 297
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
Q +P+ V+ ++ AC L + LGR+ H Y+ ++ + L NA++DMYAKCG L
Sbjct: 298 QVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCL 357
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A +F+ + R+V SW +I+ YGM G G+ A+ F +M + G PD I F S+L+
Sbjct: 358 KEARAVFDQMM--FRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLA 415
Query: 424 ACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
ACSHAGL+DEGR CF M + + P ++HY CMVD+LGRAG + EA+ + +QMP+ PN+
Sbjct: 416 ACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNER 475
Query: 484 VWGALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
VWG+LL ACR++ +AA++LFQL PE +GY+VL+SNIYA + +W++V +R M
Sbjct: 476 VWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMN 535
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
+KG+KK S +E + F D+ + KE+YK + + +K GYMP+ ALH
Sbjct: 536 SKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALH 595
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
DVE+ED+E L HSEKLA+ F I+N P + +++TKN+RVC DCH A + IS I R+I
Sbjct: 596 DVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREI 655
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
I+RD +RFHHF G CSC DYW
Sbjct: 656 IIRDTHRFHHFRDGVCSCGDYW 677
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/697 (37%), Positives = 404/697 (57%), Gaps = 31/697 (4%)
Query: 6 PSTEGFYDQL--------LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGE 57
PS+ +D L L + L Q+H+ +TT G + + +L K+ Y G
Sbjct: 14 PSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGH 73
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
A+ +F+ I S FLWN+MIR YA N L LY M G +++T+PFVL
Sbjct: 74 MPYAQHIFDQIVLKNS--FLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVL 131
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
KAC L G+ VH ++ G D YV +++ MY K G + VFD M VRDL
Sbjct: 132 KACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLT 191
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
SW M++ + + + A +F +++G + D T++++ SA G + D+ + +HGY
Sbjct: 192 SWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYV 251
Query: 238 I--------CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
+ CN FL NSI+ MY C +V AR +F+ + +D++SWNS+++GY +
Sbjct: 252 VRNGESGRVCNGFL-----MNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEK 306
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
G A +AL LF M P+ VT + +++AC + + +LG Y++ ++ +
Sbjct: 307 CGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVV 366
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
A++ MYA CG L A +F+++ E+N+ + V++ G+G+HG GR+A+ F +ML +
Sbjct: 367 GTALIGMYANCGSLVCACRVFDEM--PEKNLPACTVMVTGFGIHGRGREAISIFYEMLGK 424
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYE 468
GV PD FT++LSACSH+GL+DEG++ F MT+ SV+P HY+C+VD+LGRAG L E
Sbjct: 425 GVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDE 484
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAA 523
A+ +I+ M L PN+ VW ALL ACR+H I+A LF+L P+ +V +SNIYAA
Sbjct: 485 AYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAA 544
Query: 524 SNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE 583
+W +V +R + + L+KP ++S +E K + F D + ++Y K++ + +
Sbjct: 545 ERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQ 604
Query: 584 IKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
+K AGY PD S L+DVE+E +E ML HSE+LA+AF ++N P +++TKNLRVC DC
Sbjct: 605 LKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDC 664
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
H+ + IS + R+II+RD RFHHF G CSC YW
Sbjct: 665 HTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/635 (40%), Positives = 383/635 (60%), Gaps = 10/635 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G+ A S+F I S WN +I + H + LEL M+RSGI N +
Sbjct: 303 YAKVGDLADAISVFEKIKQPDIVS--WNAVIAGCVLHEHHEQALELLGQMKRSGICPNIF 360
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T LKACA L G+ +H +++ SD +V LVDMY+KC +D F+ +
Sbjct: 361 TLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLL 420
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+DL++W +I+ Y Q + EAL LF + +EG+ + T+ ++ + L V +
Sbjct: 421 PEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCR 480
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
VHG ++ + F D+ + NS++ Y +C +VE A +F+ DL+S+ SM+T Y Q G
Sbjct: 481 QVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYG 540
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
Q EAL LF EMQ+ + KP+ L++AC L + + G++ H +I+ +D N
Sbjct: 541 QGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGN 600
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
++++MYAKCG +D A F+++ +ER + SW+ +I G HGHGR+AL+ F+QML+EGV
Sbjct: 601 SLVNMYAKCGSIDDAGRAFSEL--TERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGV 658
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAF 470
P+HIT S+L AC+HAGL+ E + F M +L KP +HYACM+D+LGRAG + EA
Sbjct: 659 SPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAV 718
Query: 471 DMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASN 525
+++ +MP N SVWGALL A RIH G AA LF LEPE +G VL++NIYA++
Sbjct: 719 ELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAG 778
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
KW V ++R M++ +KK S IE + F DR + +E+Y K++ ++ +
Sbjct: 779 KWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMD 838
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
AGY+P + LHDVE ++E +L +HSEKLAVAFG++ A ++V KNLRVC DCH+
Sbjct: 839 KAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHT 898
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
AF++I I R+IIVRD NRFHHF+ G+CSC DYW
Sbjct: 899 AFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 234/454 (51%), Gaps = 8/454 (1%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +LL C SLR QIH+ +T SGL + + +I Y+ AR L +
Sbjct: 59 YSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDP-SIRNHLINLYSKCRNFGYARKLVDES 117
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W+ +I YA NG L + M G+ N +TF VLKAC+ +
Sbjct: 118 SEPDLVS--WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRI 175
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK VHG ++ +GF D +V LV MYAKC + D ++FDE+ R++VSW + + Y Q
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ EA+ LF + G+ + ++ S+ +A L D + + +HGY I + D
Sbjct: 236 IDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS 295
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
N++V MYA+ G++ A VF+ +++ D++SWN+++ G + + +AL L +M+ S
Sbjct: 296 ANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGI 355
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
PN T + AC +G ++LGR+ H ++ +M+ D + ++DMY+KC L+ A
Sbjct: 356 CPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARM 415
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
FN + E+++ +WN +I+GY + +AL F +M +EG+ + T ++IL + +
Sbjct: 416 AFNLL--PEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGL 473
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
++ R+ K ++ ++D G+
Sbjct: 474 QVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGK 507
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 247/515 (47%), Gaps = 12/515 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M LG F + +LK+C+ + LR Q+H + SG + +++ Y
Sbjct: 148 MHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVF-VANTLVVMYAKCD 206
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
E ++ LF+ I S WN + Y C E + L+ M SGI N ++ +
Sbjct: 207 EFLDSKRLFDEIPERNVVS--WNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ AC GK++HG +I+ G+ D + ALVDMYAK G D VF+++ D+
Sbjct: 265 VNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDI 324
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW +I E E+AL L + ++ G+ + T+ S A +G + +H
Sbjct: 325 VSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSS 384
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ DL + +V MY++C +E AR+ F+++ ++DLI+WN++++GY Q + EA
Sbjct: 385 LMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEA 444
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L LF EM N T ++ + L + R+ HG + S D + N+++D
Sbjct: 445 LSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDS 504
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y KC ++ AE +F + + ++ S+ +I Y +G G +AL+ F +M + +KPD
Sbjct: 505 YGKCSHVEDAERIFEEC--TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRF 562
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+S+L+AC++ ++G++ + K ++ +V+M + G + +A ++
Sbjct: 563 VCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL 622
Query: 477 PLPPNDSVWGALL--LACRIHGEIAANYLFQLEPE 509
S W A++ LA HG A Q+ E
Sbjct: 623 TERGIVS-WSAMIGGLAQHGHGRQALQLFNQMLKE 656
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 210/401 (52%), Gaps = 11/401 (2%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
+T + + + + + S ++ +L C + + G +H I ++G D ++ L+
Sbjct: 39 QTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLI 98
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
++Y+KC K+ DE S DLVSW+ +I+ Y Q AL+ F + G+ +
Sbjct: 99 NLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEF 158
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
T SV A + D+ + VHG + + F D+ + N++V MYA+C ++ +FD +
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
+R+++SWN++ + Y+Q EA+ LF EM S KPN + +V+ACT L G+
Sbjct: 219 PERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
HGY+I D NA++DMYAK GDL A ++F I + ++ SWN +IAG +
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI--KQPDIVSWNAVIAGCVL 336
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
H H +ALE QM G+ P+ T +S L AC+ GL + GR+ + + K+ ++ ++
Sbjct: 337 HEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFV 396
Query: 453 YACMVDMLGRAGCLYE---AFDMIKQMPLPPNDSV-WGALL 489
+VDM + L + AF++ LP D + W A++
Sbjct: 397 SVGLVDMYSKCDLLEDARMAFNL-----LPEKDLIAWNAII 432
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
+ Q+ Q + L L D+ + P V+ L+S C S + G + H +I S + D
Sbjct: 34 FSQDPQTTAILNLIDK---GNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDD 90
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
++RN ++++Y+KC + A + ++ SE ++ SW+ LI+GY +G G AL F +M
Sbjct: 91 PSIRNHLINLYSKCRNFGYARKLVDE--SSEPDLVSWSALISGYAQNGLGGGALMAFHEM 148
Query: 407 LEEGVKPDHITFTSILSACS 426
GVK + TF+S+L ACS
Sbjct: 149 HLLGVKCNEFTFSSVLKACS 168
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/703 (38%), Positives = 410/703 (58%), Gaps = 45/703 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGL--INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LL +C L SLR IH+ + +GL N AL + + + A S+F+SI
Sbjct: 8 LLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPN 67
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+WNTM R +A + V L LY M G+ NSYTFPF+LKACA + EG+ +
Sbjct: 68 L--LIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------------------- 169
HG +++ G D YV +L+ MY K G+ +D KVFD
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYI 185
Query: 170 --------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
E+ V+D+VSW +I+ Y + +EAL LF++ + + D T+V+V SA
Sbjct: 186 XSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSAC 245
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
Q + + VH + + F +L I N+++ +Y +CG VE A +F+ + +D+ISWN
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWN 305
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN- 340
+++ GY EALLLF EM S PN VT L ++ AC +LG+ +GR H YI
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKR 365
Query: 341 -SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ ++LR +++DMYAKCGD++ A+ +F+ + R++SSWN +I G+ MHG A
Sbjct: 366 LKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSM--LNRSLSSWNAMIFGFAMHGRANPA 423
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVD 458
+ FS+M ++G++PD ITF +LSACSH+G++D GR F MT+ + P+++HY CM+D
Sbjct: 424 FDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMID 483
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGY 513
+LG +G EA +MI M + P+ +W +LL AC++HG + A L ++EP+++G
Sbjct: 484 LLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGS 543
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+VL+SNIYA + +W EV K R + +KG+KK S IE + F D+++P +E+
Sbjct: 544 YVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREI 603
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
Y +E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG+++ P + +
Sbjct: 604 YGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 663
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
KNLRVC +CH A + IS IY+R+II RD RFHHF G CSC
Sbjct: 664 VKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/675 (38%), Positives = 405/675 (60%), Gaps = 26/675 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ G +N + ++ Y G+ +++ L S + WNT++ +
Sbjct: 222 KQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT--WNTVLSSL 277
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD- 144
N +E LE M G+ + +T VL AC+ ++ GK +H ++ G L +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
S+V +ALVDMY C Q G +VFD M R + W MI Y Q E +EAL+LF ++
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 205 E-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
GLL++S T+ V A + G + +A+HG+ + D +QN+++ MY+R G ++
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-----------CKPNP 312
A +F ME RDL++WN+M+TGY+ + +ALLL +MQN + KPN
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+T + ++ +C L + G++ H Y I +N+ D + +A++DMYAKCG L + +F+
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
I ++NV +WNV+I YGMHG+G++A++ M+ +GVKP+ +TF S+ +ACSH+G++D
Sbjct: 578 I--PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS-VWGALLL 490
EG + F M V+P HYAC+VD+LGRAG + EA+ ++ MP N + W +LL
Sbjct: 636 EGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLG 695
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
A RIH GEIAA L QLEP ++VL++NIY+++ W + ++R +MK +G++K
Sbjct: 696 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE+G ++ F D +P +++ +E++ ++ GY+PD SC LH+VE++++
Sbjct: 756 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEK 815
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +L HSEKLA+AFGI+N +P +++V KNLRVCNDCH A +FIS I R+II+RD R
Sbjct: 816 EILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRR 875
Query: 666 FHHFEGGTCSCNDYW 680
FH F+ GTCSC DYW
Sbjct: 876 FHRFKNGTCSCGDYW 890
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 9/405 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W ++R+ + E + Y M GI ++Y FP +LKA A + GK +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 138 RTGFLSDSYVQA-ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ G+ DS A LV++Y KCG KVFD +S R+ VSW +I++ EK E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLG---DVLKAQAVHGYAICNAFLEDLCIQNSIV 253
F+ E + S T+VSV +A L ++ + VH Y + L I N++V
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLV 243
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
AMY + G + ++++ RDL++WN++L+ QN Q EAL EM +P+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 314 TALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T ++ AC++L + G++ H Y + N ++ ++ + +A++DMY C + + +F+
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITFTSILSACSHAGLI 431
+ +R + WN +IAGY + H ++AL F M E G+ + T ++ AC +G
Sbjct: 364 MF--DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ K + + ++DM R G + A + +M
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/675 (38%), Positives = 405/675 (60%), Gaps = 26/675 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ G +N + ++ Y G+ +++ L S + WNT++ +
Sbjct: 222 KQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT--WNTVLSSL 277
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD- 144
N +E LE M G+ + +T VL AC+ ++ GK +H ++ G L +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
S+V +ALVDMY C Q G +VFD M R + W MI Y Q E +EAL+LF ++
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 205 E-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
GLL++S T+ V A + G + +A+HG+ + D +QN+++ MY+R G ++
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-----------CKPNP 312
A +F ME RDL++WN+M+TGY+ + +ALLL +MQN + KPN
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+T + ++ +C L + G++ H Y I +N+ D + +A++DMYAKCG L + +F+
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
I ++NV +WNV+I YGMHG+G++A++ M+ +GVKP+ +TF S+ +ACSH+G++D
Sbjct: 578 I--PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS-VWGALLL 490
EG + F M V+P HYAC+VD+LGRAG + EA+ ++ MP N + W +LL
Sbjct: 636 EGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLG 695
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
A RIH GEIAA L QLEP ++VL++NIY+++ W + ++R +MK +G++K
Sbjct: 696 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE+G ++ F D +P +++ +E++ ++ GY+PD SC LH+VE++++
Sbjct: 756 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEK 815
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +L HSEKLA+AFGI+N +P +++V KNLRVCNDCH A +FIS I R+II+RD R
Sbjct: 816 EILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRR 875
Query: 666 FHHFEGGTCSCNDYW 680
FH F+ GTCSC DYW
Sbjct: 876 FHRFKNGTCSCGDYW 890
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 9/405 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W ++R+ + E + Y M GI ++Y FP +LKA A + GK +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 138 RTGFLSDSYVQA-ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ G+ DS A LV++Y KCG KVFD +S R+ VSW +I++ EK E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLG---DVLKAQAVHGYAICNAFLEDLCIQNSIV 253
F+ E + S T+VSV +A L ++ + VH Y + L I N++V
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLV 243
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
AMY + G + ++++ RDL++WN++L+ QN Q EAL EM +P+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 314 TALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T ++ AC++L + G++ H Y + N ++ ++ + +A++DMY C + + +F+
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITFTSILSACSHAGLI 431
+ +R + WN +IAGY + H ++AL F M E G+ + T ++ AC +G
Sbjct: 364 MF--DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ K + + ++DM R G + A + +M
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/680 (39%), Positives = 410/680 (60%), Gaps = 19/680 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIK--YTTYGEPNTARSLFN 66
+ LLK C A LR +IH L SG +L L A ++ Y + N AR +F+
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGF---SLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ S WNT++ Y+ NG LE+ +M + + T VL A ++ LI
Sbjct: 195 RMPERDLVS--WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
GK +HG +R+GF S + ALVDMYAKCG + ++FD M R++VSW MI AY
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q E P+EA+++FQK EG+ V+++ A LGD+ + + +H ++ ++
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ NS+++MY +C V+ A +F ++ R L+SWN+M+ G+ QNG+ +AL F +M++
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
KP+ T + +++A L + HG ++ S + + + A++DMYAKCG + A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F+ + SER+V++WN +I GYG HG G+ ALE F +M + +KP+ +TF S++SACS
Sbjct: 493 RLIFDMM--SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 550
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL++ G KCF M + S++ + HY MVD+LGRAG L EA+D I QMP+ P +V+
Sbjct: 551 HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GA+L AC+IH E AA LF+L P+ GY VL++NIY A++ W +VG++R M +
Sbjct: 611 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
GL+K S++E ++ F + +P K++Y +E + IK AGY+PD + L V
Sbjct: 671 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GV 729
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E++ +E +L+ HSEKLA++FG++N T + V KNLRVC DCH+A ++IS + R+I+V
Sbjct: 730 ENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVV 789
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD RFHHF+ G CSC DYW
Sbjct: 790 RDMQRFHHFKNGACSCGDYW 809
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/675 (37%), Positives = 403/675 (59%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L +C+ A L+ + H+ + G ++ +G ++ Y G + AR +F+ ++
Sbjct: 168 VLDACSSPAGLKLGKEFHAQVIKVGFVSD-FRIGTALVSMYVKGGSMDGARQVFDGLYKR 226
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+F N MI YA +G + +L+ M++ G N +F +L C++ + GK
Sbjct: 227 DVSTF--NVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKA 284
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH + TG + D V AL+ MY CG + +VFD+M VRD+VSWTVMI Y +
Sbjct: 285 VHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSN 344
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E+A LF Q+EG+ D +T + + +A D+ A+ +H + F DL + +
Sbjct: 345 IEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTA 404
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MYA+CG ++ AR VFD M +RD++SW++M+ Y++NG EA F M+ ++ +P+
Sbjct: 405 LVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPD 464
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + L++AC +LG+ LG + + I +++ + NA+++M K G ++ A +F
Sbjct: 465 VVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFE 524
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ +R+V +WNV+I GY +HG+ R+AL+ F +ML+E +P+ +TF +LSACS AG +
Sbjct: 525 NM--VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFV 582
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EGR+ F+ + + P ++ Y CMVD+LGRAG L EA +I +MPL PN S+W LL
Sbjct: 583 EEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLA 642
Query: 491 ACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRI+G E AA EP +V +S++YAA+ W V K+R+ M+++G++K
Sbjct: 643 ACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKE 702
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
+ IE + F DR +P E+Y ++ + IK GY+P LH+V ++++
Sbjct: 703 QGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEK 762
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E ++YHSEKLA+A+G+++L A +++ KNLRVC DCHSA +FIS + R+II RDA+R
Sbjct: 763 EEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASR 822
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSC DYW
Sbjct: 823 FHHFKNGVCSCGDYW 837
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 245/488 (50%), Gaps = 9/488 (1%)
Query: 12 YDQLLKSCNFL--ASL-RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L + C L A L +Q+ + SG L I + ++ G AR F+S+
Sbjct: 64 YVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKL-HSICGNMLEARQTFDSV 122
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
N + WN +I YA GH E L+ M + + TF VL AC+S + +
Sbjct: 123 ENKTVVT--WNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKL 180
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK H +I+ GF+SD + ALV MY K G D +VFD + RD+ ++ VMI Y +
Sbjct: 181 GKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAK 240
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ E+A LF + QQEG + ++ +S+ + +AVH + ++D+ +
Sbjct: 241 SGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRV 300
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+++ MY CG++E AR VFD M+ RD++SW M+ GY +N +A LF MQ
Sbjct: 301 ATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGI 360
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+P+ +T + +++AC L R+ H ++ + D + A++ MYAKCG + A
Sbjct: 361 QPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQ 420
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+ + S R+V SW+ +I Y +G G +A E F M V+PD +T+ ++L+AC H
Sbjct: 421 VFDAM--SRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHL 478
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
G +D G + + K + + +++M + G + A + + M + + W +
Sbjct: 479 GALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWNVM 537
Query: 489 LLACRIHG 496
+ +HG
Sbjct: 538 IGGYSLHG 545
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 143/269 (53%), Gaps = 2/269 (0%)
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
DS T V + L D + V + I + ++ N+++ +++ CGN+ +AR F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D +E + +++WN+++ GY Q G EA LF +M + +P+ +T LI++ AC+ +
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
LG++FH +I D + A++ MY K G +D A +F+ ++ +R+VS++NV+I G
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLY--KRDVSTFNVMIGG 237
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
Y G G KA + F +M +EG KP+ I+F SIL CS + G+ A + +
Sbjct: 238 YAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD 297
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
V+ ++ M G + A + +M +
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKV 326
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/675 (38%), Positives = 405/675 (60%), Gaps = 26/675 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ G +N + ++ Y G+ +++ L S + WNT++ +
Sbjct: 135 KQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT--WNTVLSSL 190
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD- 144
N +E LE M G+ + +T VL AC+ ++ GK +H ++ G L +
Sbjct: 191 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 250
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
S+V +ALVDMY C Q G +VFD M R + W MI Y Q E +EAL+LF ++
Sbjct: 251 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 310
Query: 205 E-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
GLL++S T+ V A + G + +A+HG+ + D +QN+++ MY+R G ++
Sbjct: 311 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 370
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-----------CKPNP 312
A +F ME RDL++WN+M+TGY+ + +ALLL +MQN + KPN
Sbjct: 371 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 430
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+T + ++ +C L + G++ H Y I +N+ D + +A++DMYAKCG L + +F+
Sbjct: 431 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 490
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
I ++NV +WNV+I YGMHG+G++A++ M+ +GVKP+ +TF S+ +ACSH+G++D
Sbjct: 491 I--PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 548
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS-VWGALLL 490
EG + F M V+P HYAC+VD+LGRAG + EA+ ++ MP N + W +LL
Sbjct: 549 EGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLG 608
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
A RIH GEIAA L QLEP ++VL++NIY+++ W + ++R +MK +G++K
Sbjct: 609 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 668
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE+G ++ F D +P +++ +E++ ++ GY+PD SC LH+VE++++
Sbjct: 669 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEK 728
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +L HSEKLA+AFGI+N +P +++V KNLRVCNDCH A +FIS I R+II+RD R
Sbjct: 729 EILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRR 788
Query: 666 FHHFEGGTCSCNDYW 680
FH F+ GTCSC DYW
Sbjct: 789 FHRFKNGTCSCGDYW 803
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/504 (28%), Positives = 241/504 (47%), Gaps = 25/504 (4%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ LLK+ L + +QIH+ + G ++ + ++ Y G+ +F+ I
Sbjct: 13 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 72
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL--- 125
S WN++I + + LE + M + +S+T V+ AC++ +
Sbjct: 73 SERNQVS--WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG 130
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
++ GK VH +R G L +S++ LV MY K G+ + RDLV+W ++++
Sbjct: 131 LMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 189
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL-E 244
Q E+ EAL ++ EG+ D TI SV A L + + +H YA+ N L E
Sbjct: 190 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 249
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ + +++V MY C V R VFD M R + WN+M+ GY QN EALLLF M+
Sbjct: 250 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 309
Query: 305 NS-DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
S N T +V AC G+ HG+++ + D ++N +MDMY++ G +
Sbjct: 310 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 369
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM--LEEGV---------K 412
D A +F + +R++ +WN +I GY H AL +M LE V K
Sbjct: 370 DIAMRIFGKME--DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 427
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
P+ IT +IL +C+ + +G++ A K ++ +V + +VDM + GCL + +
Sbjct: 428 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 487
Query: 473 IKQMPLPPNDSVWGALLLACRIHG 496
Q+P N W +++A +HG
Sbjct: 488 FDQIP-QKNVITWNVIIMAYGMHG 510
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 189/378 (50%), Gaps = 9/378 (2%)
Query: 105 GISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA-ALVDMYAKCGQTDD 163
GI ++Y FP +LKA A + GK +H + + G+ DS A LV++Y KCG
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
KVFD +S R+ VSW +I++ EK E AL F+ E + S T+VSV +A
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 224 LG---DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
L ++ + VH Y + L I N++VAMY + G + ++++ RDL++W
Sbjct: 125 LPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII- 339
N++L+ QN Q EAL EM +P+ T ++ AC++L + G++ H Y +
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 243
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
N ++ ++ + +A++DMY C + + +F+ + +R + WN +IAGY + H ++A
Sbjct: 244 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF--DRKIGLWNAMIAGYSQNEHDKEA 301
Query: 400 LEFFSQMLEE-GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
L F M E G+ + T ++ AC +G + K + + ++D
Sbjct: 302 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 361
Query: 459 MLGRAGCLYEAFDMIKQM 476
M R G + A + +M
Sbjct: 362 MYSRLGKIDIAMRIFGKM 379
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/662 (38%), Positives = 393/662 (59%), Gaps = 11/662 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ + + ++ +L K+ Y G + A +F+ I S FLWN MIR Y
Sbjct: 79 QQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNS--FLWNFMIRGY 136
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A+NG +++L LY M G ++++T+PFVLKAC L+ G+ VH +++ G SD
Sbjct: 137 ASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDI 196
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
YV +L+ MYAK G VFD M+ RDL SW MI+ Y + A ++F +
Sbjct: 197 YVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKA 256
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEK 264
GL +D T++ + SA L V + + +HGYA+ N+ + NS++ MY C +
Sbjct: 257 GLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVD 316
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
AR +F+ + +D +SWNSM+ GY +NG A E+L LF M P+ VT + ++ AC
Sbjct: 317 ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQ 376
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
+ + + G H Y++ + + A++DMY+KCG L + +F+++ ++++ SW+
Sbjct: 377 IAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEM--PDKSLVSWS 434
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
++AGYG+HG GR+A+ M V PD+ FTSILSACSHAGL+ EG++ F M K
Sbjct: 435 AMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKE 494
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
+VKP + HY+CMVD+LGRAG L EA+ +I+ M + P +W ALL A R+H EI
Sbjct: 495 YNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEI 554
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
+A +F + P+ ++ +SNIYAA +W +V ++R ++ KGLKK S IE +
Sbjct: 555 SAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVH 614
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D+ + +++Y K+ + ++K AGY PD S +DVE+E +E ML HSE+LA+
Sbjct: 615 RFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAI 674
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AF ++N P V+++TKNLRVC DCH+ + IS + R+II+RD +RFHHF G CSC D
Sbjct: 675 AFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGD 734
Query: 679 YW 680
YW
Sbjct: 735 YW 736
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 270/701 (38%), Positives = 408/701 (58%), Gaps = 49/701 (6%)
Query: 23 ASLRQIHSSLTTSGLINQALHLGAKI---IIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
+SLR IH+ + +GL N L I ++ G P A S+F +I +WN
Sbjct: 1 SSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLP-YAISVFETIQEPNL--LIWN 57
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
TM R +A + V L LY M G+ N YTFPF+LK+CA + EG+ +HG +++
Sbjct: 58 TMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKL 117
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFD------------------------------ 169
G+ D YV +L+ MY + G+ +D KVFD
Sbjct: 118 GYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMF 177
Query: 170 -EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
E+ ++D+VSW MI+ Y + +EAL LF++ + + D T+VSV SA Q +
Sbjct: 178 DEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIE 237
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+ VH + + F +L I N+++ +Y +CG VE A +F+ + +D+ISWN+++ GY
Sbjct: 238 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 297
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA- 347
EALLLF EM S PN VT L ++ AC +LG+ ++GR H YI N +K A
Sbjct: 298 HMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYI-NKRLKGVAN 356
Query: 348 --TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ R +++DMYAKCGD++ A+ +F+ I R++SSWN +I G+ MHG A + FS+
Sbjct: 357 ASSHRTSLIDMYAKCGDIEAAQQVFDSI--LNRSLSSWNAMIFGFAMHGRANAAFDIFSR 414
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M + ++PD ITF +LSACSH+G++D GR F M + + P+++HY CM+D+LG +G
Sbjct: 415 MRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG 474
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSN 519
EA +MI M + P+ +W +LL AC++HG + A L ++EP++ G +VL+SN
Sbjct: 475 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSN 534
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IYA + +W EV K+R + +KG+KK S IE + F D+ +P +E+Y +E
Sbjct: 535 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEE 594
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG+++ P + + KNLRV
Sbjct: 595 MEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 654
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C +CH A + IS IY+R+II RD RFHHF G CSCNDYW
Sbjct: 655 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/680 (39%), Positives = 407/680 (59%), Gaps = 19/680 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIK--YTTYGEPNTARSLFN 66
+ LLK C A LR +IH L SG +L L A ++ Y + + AR +F+
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGF---SLDLFAMTGLENMYAKCRQVHEARKVFD 194
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ S WNT++ Y+ NG LE+ + M + + T VL A ++ LI
Sbjct: 195 RMPERDLVS--WNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
GK +HG +R GF S + ALVDMYAKCG +FD M R++VSW MI AY
Sbjct: 253 RIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAY 312
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q E P+EA+++FQK EG+ V+++ A LGD+ + + +H ++ ++
Sbjct: 313 VQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNV 372
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ NS+++MY +C V+ A +F ++ R ++SWN+M+ G+ QNG+ EAL F +MQ
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQAR 432
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
KP+ T + +++A L + HG ++ + + + + A++DMYAKCG + A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F+ + SER+V++WN +I GYG HG G+ ALE F +M + ++P+ +TF S++SACS
Sbjct: 493 RLIFDMM--SERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACS 550
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL++ G KCF M + S++P + HY MVD+LGRAG L EA+D I QMP+ P +V+
Sbjct: 551 HSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GA+L AC+IH E A LF+L PE GY VL++NIY A++ W +VG++R M +
Sbjct: 611 GAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
GL+K S++E ++ F + +P K++Y +E + +IK AGY+PD + L +
Sbjct: 671 GLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GL 729
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
ED+ +E +L+ HSEKLA++FG++N T + V KNLRVC DCH+A ++IS + R+IIV
Sbjct: 730 EDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIV 789
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD RFHHF+ G CSC DYW
Sbjct: 790 RDMQRFHHFKNGACSCGDYW 809
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/645 (39%), Positives = 388/645 (60%), Gaps = 42/645 (6%)
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
+WNTM+R A++ V LE+Y M G N+YTFPF+LK+CA + EG+ +H
Sbjct: 49 LIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQ 108
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDG--------------C---------------- 165
+++ G D Y +L+ MYA+ G+ +D C
Sbjct: 109 VMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSA 168
Query: 166 -KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
KVFD ++ RD+VSW MIT Y + EEAL LF++ + + D T+VSV SA Q
Sbjct: 169 RKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQS 228
Query: 225 GDVLKAQAVHGYAI-CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
G + + +H + F L I N+ + +Y++CG+VE A +F+ + +D++SWN++
Sbjct: 229 GSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTL 288
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN--S 341
+ GY EALLLF EM S PN VT L ++ AC +LG+ +GR H YI
Sbjct: 289 IGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK 348
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + LR +++DMYAKCGD++ A +FN + +++SSWN +I G+ MHG A +
Sbjct: 349 GVTNGSALRTSLIDMYAKCGDIEAAHQVFNSM--MHKSLSSWNAMIFGFAMHGRANAAFD 406
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
FS+M + G++PD IT +LSACSH+GL+D GR F +T+ ++ P+++HY CM+D+L
Sbjct: 407 LFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLL 466
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG--EIAANY---LFQLEPEHTGYFV 515
G AG EA ++I MP+ P+ +W +LL AC++HG E+A ++ L ++EPE++G +V
Sbjct: 467 GHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYV 526
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNIYA + +W +V ++RE + KG+KK S IE + F D+++P +E+Y+
Sbjct: 527 LLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYR 586
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
+E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG+++ P + V K
Sbjct: 587 MLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVK 646
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLRVC +CH A + IS IY+R+I+ RD RFHHF G CSC DYW
Sbjct: 647 NLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 192/413 (46%), Gaps = 44/413 (10%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD---GCKVFDEMSVRDLVSWTVMITAYEQ 188
H +++TG + +Y + L+++ D VF+ +L+ W M+
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ L ++ + G + ++ T + + + + + +H + D
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 249 QNSIVAMYAR---------------------C----------GNVEKARLVFDMMEKRDL 277
S+++MYAR C G+V AR VFD + +RD+
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
+SWN+M+TGY++N EAL LF EM ++ +P+ T + ++SAC GS +LGR+ H
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIH-T 239
Query: 338 IINSNMKIDATLR--NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+++ + ++L+ NA + +Y+KCGD++ A +F + S ++V SWN LI GY
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGL--SCKDVVSWNTLIGGYTHMNL 297
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR--KCFADMTKLSVKPEVKHY 453
++AL F +ML G P+ +T S+L AC+H G ID GR + D V
Sbjct: 298 YKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALR 357
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQL 506
++DM + G + A + M + + S W A++ +HG AN F L
Sbjct: 358 TSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMHGR--ANAAFDL 407
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 273/707 (38%), Positives = 411/707 (58%), Gaps = 47/707 (6%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIK--YTTYGEPNTARSLFNSIHNDKS 73
+ C+ L+++H+ + +GL +K+ +++ + AR+LF+ I
Sbjct: 32 IDKCSSSKQLKEVHARMLRTGLFFDPFS-ASKLFTASALSSFSTLDYARNLFDQIPQPNL 90
Query: 74 YSFLWNTMIRAYANNGHCVETLELY-STMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
Y+ WNT+IRAYA++ ++ ++ + + N +TFPFV+KA + G V
Sbjct: 91 YT--WNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAV 148
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
HG I+ F D Y+ +LV Y CG ++F +S +D+VSW MI+A+ Q P
Sbjct: 149 HGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCP 208
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
E+AL LF K ++E ++ +SVT+V V SA + D+ + V Y DL + N++
Sbjct: 209 EDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAM 268
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI------------------------ 288
+ MY +CG+V+ A+ +FD M +RD+ SW ML GY
Sbjct: 269 LDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWN 328
Query: 289 -------QNGQASEALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
QNG+ EAL +F+E+Q S KP+ VT + +SAC LG+ LG H YI
Sbjct: 329 VLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKR 388
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ ++ L ++++DMYAKCG L+ A +F + ER+V W+ +IAG GMHG G+ A+
Sbjct: 389 EGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVE--ERDVYVWSAMIAGLGMHGRGKAAI 446
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDM 459
+ F +M E VKP+ +TFT++L ACSHAGL+DEGR F +M + V PE+KHYACMVD+
Sbjct: 447 DLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDI 506
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYF 514
LGRAG L EA ++I +M P+ SVWGALL AC +H GE+A++ L +LEP + G
Sbjct: 507 LGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAI 566
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
VL+SNIYA + +W +V +LR+ M++ LKK S IE ++ F D +P +Y
Sbjct: 567 VLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIY 626
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDED-REHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
K+E +A ++K GY P+ S L +E++D +E L+ HSEKLA+AFG++ L P ++V
Sbjct: 627 SKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRV 686
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C DCH+ + +S +Y R I++RD RFHHF G CSC DYW
Sbjct: 687 VKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 264/667 (39%), Positives = 401/667 (60%), Gaps = 14/667 (2%)
Query: 21 FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNT 80
L L Q++ L SGL ++ L K I +G+ N A F + + LWN
Sbjct: 14 LLKHLDQVYVQLIVSGL-HKCRFLMIKFINACLHFGDVNYAHKAFREV--SEPDILLWNA 70
Query: 81 MIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
+I+ Y + +Y M+ S + N +TF +VLKAC S+ GK +HG + G
Sbjct: 71 IIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG 130
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F S+ +VQ +LV MYAK GQ VFD++ R +VSWT +I+ Y Q P EAL +F+
Sbjct: 131 FGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFK 190
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA--ICNAFLEDLCIQNSIVAMYAR 258
+ +Q + D + +VSV +A + D+ + +++HG + F D+ I S+ MYA+
Sbjct: 191 EMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAK 248
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G VE AR F+ MEK +LI WN+M++GY NG EA+ LF EM + + + +T
Sbjct: 249 RGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSA 308
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
V A +GS +L R GYI S + D + ++DMYAKCG + A +F+ + +++
Sbjct: 309 VLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRV--ADK 366
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V W+V+I GYG+HGHG++A+ +++M + GV P+ TF +L+AC ++GL+ EG + F
Sbjct: 367 DVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELF 426
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--- 495
M ++P +HY+C+VD+LGRAG L +A+D I MP+ P SVWGALL AC+IH
Sbjct: 427 HLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKV 486
Query: 496 --GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
GEIAA LF L+P +TG++V +SN+YA+++ W V +R M KGL K S IE
Sbjct: 487 RLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEI 546
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+++ F DR +P KE++++++ + +K AGY+P + LHD+ E+ E L +HS
Sbjct: 547 NGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHS 606
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
E+LAVA+GI++ P +++TKNLR C +CHSA + IS + R+II+RDA RFHHF+ G
Sbjct: 607 ERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGV 666
Query: 674 CSCNDYW 680
CSC D+W
Sbjct: 667 CSCGDFW 673
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/690 (37%), Positives = 411/690 (59%), Gaps = 15/690 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M++ G + F + +L +C+ A+L R++H + +GL N A +G +I Y G
Sbjct: 136 MQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNAT-VGNALISMYAKCG 194
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
AR +F+++ + S W T+ AYA +G+ E+L+ Y M + G+ + T+ V
Sbjct: 195 SVRDARRVFDAMASRDEVS--WTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNV 252
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L AC S + + +GK +H I+ + SD V AL MY KCG D +VF+ + RD+
Sbjct: 253 LSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDV 312
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
++W MI + + EEA +F + +E + D VT +++ SA + G + + +H
Sbjct: 313 IAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHAR 372
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
A+ + + D+ N+++ MY++ G+++ AR VFD M KRD++SW +++ GY GQ E+
Sbjct: 373 AVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVES 432
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
F +M + N +T + ++ AC+ + + G++ H ++ + + D + NA+M M
Sbjct: 433 FSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSM 492
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y KCG ++ A + + S R+V +WN LI G +G G +AL+ F M E ++P+
Sbjct: 493 YFKCGSVEDAIRVSEGM--STRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNAT 550
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
TF +++SAC L++EGR+ FA M K + P KHYACMVD+L RAG L EA D+I
Sbjct: 551 TFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILT 610
Query: 476 MPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP P+ ++WGALL ACR HG E AA +LEP++ G +V +S IYAA+ WR+V
Sbjct: 611 MPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDV 670
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
KLR+ MK +G+KK S IE ++ F D+ +P +E+Y ++E++ +IK GY+
Sbjct: 671 AKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYV 730
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
PD +HD++ E +E + +HSEKLA+A+G+++ PE ++V+KNLRVC DCH+A +FI
Sbjct: 731 PDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFI 790
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S I R+II RDA+RFHHF+ G CSC DYW
Sbjct: 791 SKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 248/474 (52%), Gaps = 20/474 (4%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGL------INQALHLGAKIIIKYTTYGEPNTAR 62
Y +LL+SC LA +Q+H + G+ IN L L Y G N AR
Sbjct: 47 YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKL-------YVHCGSVNEAR 99
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
LF+ N S WN MI YA+ G E L++ M++ G+ + +TF +L AC+S
Sbjct: 100 RLFDKFSNKSVVS--WNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSS 157
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
+ + G+ VH ++ G +++ V AL+ MYAKCG D +VFD M+ RD VSWT +
Sbjct: 158 PAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL 217
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
AY ++ +E+L + QEG+ +T ++V SA G L + K + +H + +
Sbjct: 218 TGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEH 277
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
D+ + ++ MY +CG V+ AR VF+ + RD+I+WN+M+ G + +GQ EA +F
Sbjct: 278 HSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHR 337
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M P+ VT L ++SAC G G++ H + + D NA+++MY+K G
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGS 397
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
+ A +F+ + +R+V SW L+ GY G ++ F +ML++GV+ + IT+ +L
Sbjct: 398 MKDARQVFDRM--PKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVL 455
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
ACS+ + G++ A++ K + ++ ++ M + G + +A + + M
Sbjct: 456 KACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGM 509
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 205/390 (52%), Gaps = 5/390 (1%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
+ + G +SY + +L++C + GK VH I+R G + Y+ L+ +Y CG
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
++ ++FD+ S + +VSW VMI+ Y +EA LF QQEGL D T VS+ SA
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSA 154
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
+ + VH + + + N++++MYA+CG+V AR VFD M RD +SW
Sbjct: 155 CSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSW 214
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
++ Y ++G A E+L + M +P+ +T + ++SAC L + + G++ H I+
Sbjct: 215 TTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVE 274
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
S D + A+ MY KCG + A +F + R+V +WN +I G G +A
Sbjct: 275 SEHHSDVRVSTALTKMYIKCGAVKDAREVFECL--PNRDVIAWNTMIGGLVDSGQLEEAH 332
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
F +ML+E V PD +T+ +ILSAC+ G + G++ A K + +V+ +++M
Sbjct: 333 GMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMY 392
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
+AG + +A + +M P D V W AL+
Sbjct: 393 SKAGSMKDARQVFDRM--PKRDVVSWTALV 420
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 151/280 (53%), Gaps = 2/280 (0%)
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
+ Q Q+G DS V + + + D+ + VH + + ++ I N+++ +Y
Sbjct: 31 VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
CG+V +AR +FD + ++SWN M++GY G EA LF MQ +P+ T +
Sbjct: 91 HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++SAC+ + GR+ H ++ + + +AT+ NA++ MYAKCG + A +F+ + +
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAM--AS 208
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
R+ SW L Y G+ +++L+ + ML+EGV+P IT+ ++LSAC +++G++
Sbjct: 209 RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQI 268
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
A + + +V+ + M + G + +A ++ + +P
Sbjct: 269 HAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP 308
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/667 (37%), Positives = 395/667 (59%), Gaps = 11/667 (1%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
NF L+ IH+ L L +Q +L I+ +G N ++ +F+ + + FLWN
Sbjct: 27 NFFNQLKHIHARLLRLHL-DQDNYLLNLILCCALDFGSTNYSKLVFSQV--KEPNIFLWN 83
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
TMIR + + + LY +MR G N++T PFVLKACA + G +H +++
Sbjct: 84 TMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKA 143
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
G+ D +V+ +L+ +Y KC DD KVFD++ +++VSWT +IT Y + EA+ F
Sbjct: 144 GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAF 203
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+K + GL DS ++V V +A +LGD + + Y + ++ + S++ MY +C
Sbjct: 204 KKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
GN+E+A L+F M ++D++SW++M+ GY NG +AL LF +MQ+ + KP+ T + ++
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
SAC LG+ LG + + + L A++DMY+KCG + A +F + +R
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRV 383
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V WN ++ G M+GH + FS + + G++PD TF +L C+H G ++EGR+ F
Sbjct: 384 V--WNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 440 DMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--- 495
+M ++ S+ P ++HY CMVD+LGRAG L EA +I MP+ PN VWGALL C++H
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 496 --GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
E L +LEP ++G +V +SNIY+ +++W E K+R MK + ++K A S IE
Sbjct: 502 HLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEI 561
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F D+ + +++Y K++ + E+K G++P L D+E+E++EH L YHS
Sbjct: 562 DGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHS 621
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLAVAFG++ P V++V KNLRVC DCH A + IS I +R+II+RD NRFH F G+
Sbjct: 622 EKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGS 681
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 682 CSCRDYW 688
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 258/659 (39%), Positives = 399/659 (60%), Gaps = 34/659 (5%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G + A+SL + D+ WN+MI +++ N +E L M G+ +
Sbjct: 160 YAKLGRLDDAKSLL-VLFEDRDL-VTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGV 217
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTG-FLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
TF VL AC+ L+ GK +H +RT + +S+V +ALVDMY CGQ + G VFD
Sbjct: 218 TFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDS 277
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLK 229
+ R + W MI Y Q+E E+AL+LF + + GL S++ T+ S+ A + + +
Sbjct: 278 VLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISR 337
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
+ +HGY I + +QN+++ MY+R G+++ ++ +FD ME RD++SWN+++T Y+
Sbjct: 338 KEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVI 397
Query: 290 NGQASEALLLFDEMQNSD----------------CKPNPVTALILVSACTYLGSRQLGRK 333
G++S+ALLL EMQ + KPN +T + ++ C L + G++
Sbjct: 398 CGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKE 457
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
H Y I + + T+ +A++DMYAKCG L+ A +F+ + RNV +WNV+I YGMH
Sbjct: 458 IHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM--PIRNVITWNVIIMAYGMH 515
Query: 394 GHGRKALEFFSQMLEEG-----VKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVK 447
G G+++LE F M+ EG VKP +TF ++ ++CSH+G++DEG F M + ++
Sbjct: 516 GKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIE 575
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND-SVWGALLLACRIH-----GEIAAN 501
P HYAC+VD++GRAG + EA+ ++ MP + W +LL ACRI+ GEIAA
Sbjct: 576 PAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAE 635
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
L QL+P+ ++VL+SNIY+++ W + LR MK G+KK S IEYG ++ F
Sbjct: 636 NLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFL 695
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
D +P ++++ +E+++ +K GY+PD +C LHD+++E++E +L HSEKLA+AFG
Sbjct: 696 AGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFG 755
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I+N P ++V KNLRVCNDCH+A +FIS I R+II+RDA RFHHF+ GTCSC DYW
Sbjct: 756 ILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 246/497 (49%), Gaps = 34/497 (6%)
Query: 26 RQIHSSLTTSGLIN-QALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
+QIH+ + G + ++ + ++ Y G A +F+ I S WN++I A
Sbjct: 30 KQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVS--WNSIISA 87
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS----NSLILEGKVVHGDIIRTG 140
++ + M G +S+T + AC++ + L L GK +HG R G
Sbjct: 88 LCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWL-GKQIHGCCFRKG 146
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
++ AL+ MYAK G+ DD + RDLV+W MI+++ Q E+ EAL+ +
Sbjct: 147 HWR-TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLR 205
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI-CNAFLEDLCIQNSIVAMYARC 259
EG+ D VT SV A L + + +H YA+ + +E+ + +++V MY C
Sbjct: 206 LMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNC 265
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALIL 318
G VE RLVFD + R + WN+M+ GY Q+ +AL+LF EM+ + N T +
Sbjct: 266 GQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSI 325
Query: 319 VSACTYLGSRQLGRK--FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
V A Y+ + RK HGY+I ++ + L+NA++DMY++ GD+ T++ +F+ +
Sbjct: 326 VPA--YVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSME-- 381
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQM--LEEG--------------VKPDHITFTS 420
+R++ SWN +I Y + G AL +M +EE KP+ IT +
Sbjct: 382 DRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMT 441
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
+L C+ + +G++ A + + +V + +VDM + GCL A + QMP+
Sbjct: 442 VLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPI-R 500
Query: 481 NDSVWGALLLACRIHGE 497
N W +++A +HG+
Sbjct: 501 NVITWNVIIMAYGMHGK 517
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 231/466 (49%), Gaps = 33/466 (7%)
Query: 12 YDQLLKSCNFLASLR---QIHS-SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+ +L +C+ L LR +IH+ +L T +I + +G+ ++ Y G+ + R +F+S
Sbjct: 219 FASVLPACSHLDLLRTGKEIHAYALRTDDVIENSF-VGSALVDMYCNCGQVESGRLVFDS 277
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLI 126
+ + K LWN MI YA + H + L L+ M +G+ SN+ T ++ A I
Sbjct: 278 VLDRKIG--LWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGI 335
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+ +HG +I+ G ++ Y+Q AL+DMY++ G ++FD M RD+VSW +IT+Y
Sbjct: 336 SRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSY 395
Query: 187 EQAEKPEEALILFQKTQ----------------QEGLLSDSVTIVSVASAVGQLGDVLKA 230
+ +AL+L + Q Q +S+T+++V L + K
Sbjct: 396 VICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKG 455
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H YAI N + + +++V MYA+CG + AR VFD M R++I+WN ++ Y +
Sbjct: 456 KEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMH 515
Query: 291 GQASEALLLFDEM-----QNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMK 344
G+ E+L LF++M + + KP VT + L ++C++ G G FH ++
Sbjct: 516 GKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIE 575
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
++D+ + G ++ A + N + V +W+ L+ ++ H + E +
Sbjct: 576 PAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIY-HNIEIGEIAA 634
Query: 405 QMLEEGVKPDHITFTSILSAC-SHAGLIDEGRKCFADMTKLSVKPE 449
+ L + ++PD + +LS S AGL D+ M + VK E
Sbjct: 635 ENLLQ-LQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKE 679
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 188/371 (50%), Gaps = 10/371 (2%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF--LSDSYVQAALVDMYAKC 158
M SG S +++ FP VLKA A + GK +H + + G+ S + LV+MY KC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
G D KVFD ++ RD VSW +I+A + E+ E A+ F+ EG S T+VS+A
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 219 SAVGQL---GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
A L + + +HG N+++AMYA+ G ++ A+ + + E R
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
DL++WNSM++ + QN + EAL+ M KP+ VT ++ AC++L + G++ H
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239
Query: 336 GYIINSNMKIDAT-LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
Y + ++ I+ + + +A++DMY CG +++ +F+ + +R + WN +IAGY
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSV--LDRKIGLWNAMIAGYAQSE 297
Query: 395 HGRKALEFFSQM-LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY 453
H KAL F +M G+ + T +SI+ A I + K ++
Sbjct: 298 HDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQ 357
Query: 454 ACMVDMLGRAG 464
++DM R G
Sbjct: 358 NALIDMYSRMG 368
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/708 (37%), Positives = 413/708 (58%), Gaps = 47/708 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI--IIKYTTYGEPNTARSLFNSIHNDK 72
L++ C L L+Q H + +G + + +K+ + +++ AR +F+ I K
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDP-YSASKLFAMAALSSFASLEYARKVFDEI--PK 92
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKV 131
SF WNT+IRAYA+ V ++ + M S N YTFPF++KA A S + G+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG +++ SD +V +L+ Y CG D CKVF + +D+VSW MI + Q
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P++AL LF+K + E + + VT+V V SA ++ ++ + V Y N +L + N+
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 252 IVAMYARCGNVEKARLVFDMME-------------------------------KRDLISW 280
++ MY +CG++E A+ +FD ME ++D+++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 281 NSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
N++++ Y QNG+ +EAL++F E+Q + K N +T + +SAC +G+ +LGR H YI
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
++++ + +A++ MY+KCGDL+ + +FN + +R+V W+ +I G MHG G +A
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVD 458
++ F +M E VKP+ +TFT++ ACSH GL+DE F M + + PE KHYAC+VD
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LGR+G L +A I+ MP+PP+ SVWGALL AC+IH E+A L +LEP + G
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
VL+SNIYA KW V +LR+ M+ GLKK S IE I F + D +P ++V
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDED-REHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
Y K+ + ++K GY P++S L +E+E+ +E LN HSEKLA+ +G+++ V++
Sbjct: 631 YGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIR 690
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLRVC DCHS + IS +Y R+IIVRD RFHHF G CSCND+W
Sbjct: 691 VIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/667 (37%), Positives = 395/667 (59%), Gaps = 11/667 (1%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
NF L+ IH+ L L +Q +L I+ +G N ++ +F+ + + FLWN
Sbjct: 27 NFFNQLKHIHARLLRLHL-DQDNYLLNLILCCALDFGSTNYSKLVFSQV--KEPNIFLWN 83
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
TMIR + + + LY +MR G N++T PFVLKACA + G +H +++
Sbjct: 84 TMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKA 143
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
G+ D +V+ +L+ +Y KC DD KVFD++ +++VSWT +IT Y + EA+ F
Sbjct: 144 GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAF 203
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+K + GL DS ++V V +A +LGD + + Y + ++ + S++ MY +C
Sbjct: 204 KKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
GN+E+A L+F M ++D++SW++M+ GY NG +AL LF +MQ+ + KP+ T + ++
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
SAC LG+ LG + + + L A++DMY+KCG + A +F + +R
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRV 383
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V WN ++ G M+GH + FS + + G++PD TF +L C+H G ++EGR+ F
Sbjct: 384 V--WNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFN 441
Query: 440 DMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--- 495
+M ++ S+ P ++HY CMVD+LGRAG L EA +I MP+ PN VWGALL C++H
Sbjct: 442 NMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDT 501
Query: 496 --GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
E L +LEP ++G +V +SNIY+ +++W E K+R MK + ++K A S IE
Sbjct: 502 HLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEI 561
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F D+ + +++Y K++ + E+K G++P L D+E+E++EH L YHS
Sbjct: 562 DGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHS 621
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLAVAFG++ P V++V KNLRVC DCH A + IS I +R+II+RD NRFH F G+
Sbjct: 622 EKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGS 681
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 682 CSCRDYW 688
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/678 (39%), Positives = 403/678 (59%), Gaps = 15/678 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ LLK C + L+ +IH S+ TSG + L ++ Y + N A ++F+ +
Sbjct: 33 FTYLLKLCGDNSDLKRGKEIHGSVITSGF-SWNLFAMTGVVNMYAKCRQINDAYNMFDRM 91
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ WNTMI YA NG L L M G +S T +L A A L+
Sbjct: 92 --PERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRI 149
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G VHG ++R GF S V ALVDMY+KCG +FD M R +VSW MI Y Q
Sbjct: 150 GMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQ 209
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ E A+++FQK EG+ +VT++ A LGD+ + + VH D+ +
Sbjct: 210 SGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSV 269
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
NS+++MY++C V+ A +F + + L+SWN+M+ GY QNG +EAL F EMQ+ +
Sbjct: 270 MNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI 329
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP+ T + ++ A L + + HG +I + + + A++DMYAKCG + TA
Sbjct: 330 KPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARK 389
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+ ++ R+V +WN +I GYG HG G+ ++E F +M + +KP+ ITF LSACSH+
Sbjct: 390 LFDMMNA--RHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHS 447
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL++EG F M K ++P + HY MVD+LGRAG L +A+D I++MP+ P +V+GA
Sbjct: 448 GLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGA 507
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
+L AC+IH GE AA +F+L P+ GY VL++NIYA ++ W +V K+R M+ GL
Sbjct: 508 MLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGL 567
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
+K S++E G ++ F++ +P K++Y +E++ EI+ AGY+PD + ++HDVED
Sbjct: 568 QKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTN-SIHDVED 626
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+ + +LN HSEKLA+AFG++N + + + KNLRVC DCH+A ++IS + R+IIVRD
Sbjct: 627 DVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRD 686
Query: 663 ANRFHHFEGGTCSCNDYW 680
+RFH F+ G CSC DYW
Sbjct: 687 MHRFHLFKDGVCSCGDYW 704
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/713 (37%), Positives = 424/713 (59%), Gaps = 49/713 (6%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKII--IKYTTYGEPNTARSLF--NS 67
Y LL+ C + + +QIHS + +GL N + + +K+I + G+ + A SLF N
Sbjct: 31 YLNLLEKCKNINTFKQIHSLIIKTGL-NNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQ 89
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
H+ K F+WN++IR Y+ + + +L L+S M G+ NS+TFPF+ K+C
Sbjct: 90 QHH-KHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATH 148
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD------------------------- 162
EGK +H ++ + +V +++ MYA G+ D
Sbjct: 149 EGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYV 208
Query: 163 -DGC-----KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVS 216
GC ++FDE+ V+D+VSW MI+ Y Q+ + EEA++ F + Q+ +L + T+V
Sbjct: 209 SQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVV 268
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRD 276
V SA G + + + N F +L + N+++ MY +CG + AR +FD +E++D
Sbjct: 269 VLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKD 328
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
+ISWN+M+ GY EAL LF+ M S+ KPN VT L ++ AC LG+ LG+ H
Sbjct: 329 VISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHA 388
Query: 337 YIINSNMK--IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
Y I+ N++ +A+L +++DMYAKCG ++ AE +F +H RN++SWN +++G+ MHG
Sbjct: 389 Y-IDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMH--SRNLASWNAMLSGFAMHG 445
Query: 395 HGRKALEFFSQMLEEGV-KPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKH 452
H +AL FS+M+ +G+ +PD ITF +LSAC+ AGL+D G + F M + + P+++H
Sbjct: 446 HAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQH 505
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLE 507
Y CM+D+L RA EA ++K M + P+ ++WG+LL AC+ H GE A LFQLE
Sbjct: 506 YGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLE 565
Query: 508 PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN 567
PE+ G FVL+SNIYA + +W +V ++R + +KG+KK + IE D+ F D+ +
Sbjct: 566 PENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFH 625
Query: 568 PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTP 627
P +YK + + ++ G++P+ S L+D+++E +E L+ HSEKLA++FG++ P
Sbjct: 626 PECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKP 685
Query: 628 EAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLRVC +CHSA + IS I+ R+II RD NRFHHF+ G CSCND W
Sbjct: 686 GTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 239/557 (42%), Positives = 349/557 (62%), Gaps = 8/557 (1%)
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
K H I G DS + MY + D VF+++ W VMI +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+ +L L+ K ++GL D + L D+ + + +H + +C DL +
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
++V MYA+CG++E ARLVFD M RDL+SW SM++GY NG SE L FD M++S
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN V+ L ++ AC LG+ + G FH Y+I + + D + A+MDMY+KCG LD A +
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F++ + +++ W+ +IA YG+HGHGRKA++ F QM++ GV+P H+TFT +LSACSH+G
Sbjct: 977 FDET--AGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 1034
Query: 430 LIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L++EG+ F MT+ + ++ +YACMVD+LGRAG L EA D+I+ MP+ P+ S+WG+L
Sbjct: 1035 LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094
Query: 489 LLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L ACRIH E A++LF L+P H GY VL+SNIYAA ++W EV K+R+ M +G
Sbjct: 1095 LGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGAN 1154
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K FS++EY + F DR +P W+++Y K+E +A +K GY+P LHD+E+E
Sbjct: 1155 KIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEE 1214
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
+E L+YHSE+LA+AFG++N +P +++TKNLR+C DCH+A + IS I R I+VRD
Sbjct: 1215 AKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDM 1274
Query: 664 NRFHHFEGGTCSCNDYW 680
+RFH FE G CSC DYW
Sbjct: 1275 HRFHRFEDGVCSCGDYW 1291
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 204/595 (34%), Positives = 330/595 (55%), Gaps = 15/595 (2%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LK+C L L + IH + I + +G+ ++ Y+ G+ A +F +
Sbjct: 110 LKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQ--R 167
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ LW +M+ Y N E L L+S M + + T V+ ACA + G
Sbjct: 168 PDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSC 227
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VHG +IR F D + +L+++YAK G +F +M +D++SW+ MI Y E
Sbjct: 228 VHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEA 287
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EAL LF + ++ +SVT+VS A ++ + + +H A+ F D + +
Sbjct: 288 ANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTA 347
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY +C ++A +F + K+D++SW ++L+GY QNG A +++ +F M + +P+
Sbjct: 348 LIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPD 407
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V + +++A + LG Q HGY++ S + + +++++Y+KCG L A +F
Sbjct: 408 AVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFK 467
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGL 430
+ R+V W+ +IA YG+HG G +ALE F QM++ V+P+++TF SILSACSHAGL
Sbjct: 468 GM--IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGL 525
Query: 431 IDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++EG K F M ++P+ +H+ MVD+LGR G L +A D+I +MP+P VWGALL
Sbjct: 526 VEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALL 585
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACRIH GE AA LF L+P H GY++L+SNIYA KW V +LR +K +GLKK
Sbjct: 586 GACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKK 645
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
S++E + F +DR +P +++Y+ + + ++ Y+PDL LHD
Sbjct: 646 MFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 260/486 (53%), Gaps = 9/486 (1%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L ++CN S+ Q+HS + +G+++ K+ Y AR +F+ + +
Sbjct: 10 LFQACNNGRSVSQLHSQVFKTGILHDTF-FATKLNSLYAKCASLQAARKVFDETPHPNVH 68
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVH 133
LWN+ +R+Y ETL L+ M +G + +++T P LKACA ++ GKV+H
Sbjct: 69 --LWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126
Query: 134 GDIIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
G + + SD +V +ALV++Y+KCGQ + KVF+E D V WT M+T Y+Q P
Sbjct: 127 GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDP 186
Query: 193 EEALILF-QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EEAL LF Q + ++ D VT+VSV SA QL +V VHG I F DL + NS
Sbjct: 187 EEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNS 246
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ +YA+ G + A +F M ++D+ISW++M+ Y N A+EAL LF EM +PN
Sbjct: 247 LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPN 306
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + + AC + + G+K H + ++D ++ A++DMY KC D A ++F
Sbjct: 307 SVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQ 366
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +++V SW L++GY +G K++ F ML +G++PD + IL+A S G+
Sbjct: 367 RL--PKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIF 424
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ + + V A ++++ + G L +A + K M + + +W +++ A
Sbjct: 425 QQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSSMIAA 483
Query: 492 CRIHGE 497
IHG
Sbjct: 484 YGIHGR 489
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 227/422 (53%), Gaps = 9/422 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
+ L++ H+ + GL + L K I Y ++ + A +F I N SFLWN M
Sbjct: 733 FSCLKKTHAKIFAYGLQYDSRIL-TKFAIMYVSFNRIDAASIVFEDIPN--PCSFLWNVM 789
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
IR +A +G + +LELYS M G+ + + FPF LK+CA S + GKV+H ++ G
Sbjct: 790 IRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGC 849
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+D +V AALVDMYAKCG + VFD+M+VRDLVSWT MI+ Y E L F
Sbjct: 850 SNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDL 909
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G++ + V+I+SV A G LG + K + H Y I F D+ + +I+ MY++CG+
Sbjct: 910 MRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGS 969
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
++ AR +FD +DL+ W++M+ Y +G +A+ LFD+M + +P+ VT ++SA
Sbjct: 970 LDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSA 1029
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERN 379
C++ G + G K + ++ I L N ++D+ + G L A ++ ++ P E +
Sbjct: 1030 CSHSGLLEEG-KMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM-PVEPD 1087
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQM--LEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
S W L+ +H + A + + L+ H+ ++I +A S +++ RK
Sbjct: 1088 ASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKM 1147
Query: 438 FA 439
A
Sbjct: 1148 MA 1149
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/663 (39%), Positives = 400/663 (60%), Gaps = 14/663 (2%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
L Q++ L SGL ++ L K I +G+ N A F + + LWN +I+
Sbjct: 3 LDQVYVQLIVSGL-HKCRFLMIKFINACLHFGDVNYAHKAFREV--SEPDILLWNAIIKG 59
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
Y + +Y M+ S + N +TF +VLKAC S+ GK +HG + GF S+
Sbjct: 60 YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 119
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+VQ +LV MYAK GQ VFD++ R +VSWT +I+ Y Q P EAL +F++ +Q
Sbjct: 120 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 179
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA--ICNAFLEDLCIQNSIVAMYARCGNV 262
+ D + +VSV +A + D+ + +++HG + F D+ I S+ MYA+ G V
Sbjct: 180 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKRGLV 237
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
E AR F+ MEK +LI WN+M++GY NG EA+ LF EM + + + +T V A
Sbjct: 238 EVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLAS 297
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+GS +L R GYI S + D + ++DMYAKCG + A +F+ + ++++V
Sbjct: 298 AQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRV--ADKDVVL 355
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W+V+I GYG+HGHG++A+ +++M + GV P+ TF +L+AC ++GL+ EG + F M
Sbjct: 356 WSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP 415
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GE 497
++P +HY+C+VD+LGRAG L +A+D I MP+ P SVWGALL AC+IH GE
Sbjct: 416 DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGE 475
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
IAA LF L+P +TG++V +SN+YA+++ W V +R M KGL K S IE ++
Sbjct: 476 IAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNL 535
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
+ F DR +P KE++++++ + +K AGY+P + LHD+ E+ E L +HSE+LA
Sbjct: 536 ETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLA 595
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VA+GI++ P +++TKNLR C +CHSA + IS + R+II+RDA RFHHF+ G CSC
Sbjct: 596 VAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCG 655
Query: 678 DYW 680
D+W
Sbjct: 656 DFW 658
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/574 (42%), Positives = 376/574 (65%), Gaps = 13/574 (2%)
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
P V+KAC +L+GK +H +++ GF D +V A+LV MY++ G D K+FD+M
Sbjct: 1 PPVVKACGD---LLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
RD SW MI+ Y Q EAL + + + EG+ D++T+ SV Q+GD+L + +
Sbjct: 58 RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H Y I + +L + N+++ MYA+ G++ A+ VF ++ K D++SWN+++TGY QNG A
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLA 176
Query: 294 SEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
SEA+ ++ M+ + + PN T + ++ A +++G+ Q G + HG +I + + D +
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTC 236
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++DMY KCG LD A ++F + +N WN +I+ YG+HG G KALE F +M E VK
Sbjct: 237 LIDMYGKCGKLDDAISLFYQV--PRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVK 294
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PDHITF S+LSACSH+GL+ + + CF M + +KP +KHY CMVD+ GRAG L AF+
Sbjct: 295 PDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFN 354
Query: 472 MIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNK 526
IK+MP+ P+ S WGALL ACRIHG I A+ LF+++ E+ GY+VL+SNIYA K
Sbjct: 355 FIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGK 414
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W V +R +++GL+K +S I + F+T ++ +P +E+Y+++ + +IK
Sbjct: 415 WEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKT 474
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY+PD L DVE++++EH+L HSE+LA+A+GI++ +P+ +++ KNLRVC DCH+
Sbjct: 475 IGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTV 534
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+FIS I R+IIVRD++RFHHF+GGTCSC DYW
Sbjct: 535 TKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 206/403 (51%), Gaps = 12/403 (2%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
++K+C L ++IH + G + + A ++ Y+ +G AR LF+ +
Sbjct: 3 VVKACGDLLDGKKIHCLVLKLGF-EWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG 61
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
S WN MI Y NG+ E L++ MR G+ ++ T VL CA IL GK++H
Sbjct: 62 S--WNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+I+ G + +V AL++MYAK G KVF + ++D+VSW +IT Y Q E
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFG-LLIKDVVSWNTLITGYAQNGLASE 178
Query: 195 AL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
A+ + + E ++ + T VS+ A +G + + +HG I N D+ + ++
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
MY +CG ++ A +F + +++ + WN+M++ Y +G +AL LF EM+ KP+ +
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHI 298
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFN 371
T + L+SAC++ G ++ ++ I +L++ ++D++ + G+L+ A N
Sbjct: 299 TFVSLLSACSHSGLVS-DAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIK 357
Query: 372 DIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGV 411
+ P + + S+W L+ +HG+ G+ A E ++ E V
Sbjct: 358 KM-PIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENV 399
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/711 (37%), Positives = 413/711 (58%), Gaps = 50/711 (7%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIK--YTTYGEPNTARSLFNSIHNDK 72
L + C L+QIH+ + + ++ + +++ ++++ + AR +F+ I
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDP-YAASELFTAAAFSSFSALDYARKVFDQIPQPN 203
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKV 131
YS WN +IRA A + ++++ ++ M S N +TFP ++KA A L GK
Sbjct: 204 LYS--WNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKA 261
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD--EMSVRDLVSWTVMITAYEQA 189
VHG I+T F D +V +L+ YA CG D VF+ E + +D+VSW M+T + Q
Sbjct: 262 VHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQG 321
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
P++AL LF++ + EG+ ++VT+VSV SA + ++ + V Y N + +L +
Sbjct: 322 GYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVC 381
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISW----------------------------- 280
N+ + M+ +CG VE AR +FD MEKRD++SW
Sbjct: 382 NATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIP 441
Query: 281 --NSMLTGYIQNGQASEALLLFDEMQ--NSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
N +++GY Q+G+ EAL +F E+Q S +P+ VT L +SAC LG+ +G HG
Sbjct: 442 AWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHG 501
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
YI ++++ L +++DMY+K GD++ A +F+ I ++V W+ +IAG MHG G
Sbjct: 502 YIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSI--GNKDVFVWSAMIAGLAMHGRG 559
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYAC 455
A+E F M E VKP+ +TFT++L ACSH+GL+DEG++ F +M ++ V P+ KHY+C
Sbjct: 560 EAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSC 619
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEH 510
MVD+LGRAG L EA I+ MPL P+ SVWGALL AC IHG E A + L ++EP +
Sbjct: 620 MVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGN 679
Query: 511 TGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYW 570
G +VL+SN+YA + W V +LR+ M++ GLKK S IE + F D +P
Sbjct: 680 HGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLS 739
Query: 571 KEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED-REHMLNYHSEKLAVAFGIMNLTPEA 629
+++Y K++ + ++ GY+ + C L VE+E+ +E L HSEK+A+AFG++ +
Sbjct: 740 RDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQ 799
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLRVC DCH+ + +S +Y R I++RD RFHHF GG CSC DYW
Sbjct: 800 AIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/655 (38%), Positives = 381/655 (58%), Gaps = 41/655 (6%)
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
N + S S WN +I +Y L +Y+ +R+ +++ P VLKAC S
Sbjct: 79 LNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVS 138
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
GK +HG +++ G D +V AL+ MY +C + VFD+M RD+VSW+ MI
Sbjct: 139 WTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIR 198
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
+ + ++ + AL L ++ + V +VS+ + ++ +A+H Y I N+ E
Sbjct: 199 SLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNE 258
Query: 245 DLCIQNS--IVAMYARCGNV-------------------------------EKARLVFDM 271
+ + + ++ MYA+CG++ E+AR +FD
Sbjct: 259 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDS 318
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ RD++ W +ML+ Y Q +A LFD+M+ S +P VT + L+S C G+ LG
Sbjct: 319 TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 378
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ H YI +++D L A++DMYAKCGD++ A +F I R++ WN +I G+
Sbjct: 379 KWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLF--IEAISRDICMWNAIITGFA 436
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEV 450
MHG+G +AL+ F++M +GVKP+ ITF +L ACSHAGL+ EG+K F M + P++
Sbjct: 437 MHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQI 496
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
+HY CMVD+LGRAG L EA +MIK MP+ PN VWGAL+ ACR+H GE+AA L +
Sbjct: 497 EHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE 556
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
+EPE+ GY VLMSNIYAA+N+W + +R+ MK G+KK SVIE + F D+
Sbjct: 557 IEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQ 616
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P + + + + M ++ AGY+PD S L ++++E++E L YHSEKLA+AFG+++
Sbjct: 617 SHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLIST 676
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P +++ KNLRVCNDCH+A + +S IY R IIVRD NRFHHF G CSC DYW
Sbjct: 677 APSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/722 (37%), Positives = 417/722 (57%), Gaps = 58/722 (8%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+ C L +LR Q+H+ L +G ++ LG++++ Y G AR +F+ +
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNG-VDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 71
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+S W ++ Y G ET++L+ M G+ + + FP V KAC+
Sbjct: 72 SERNVFS--WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 129
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK V+ ++ GF +S V+ +++DM+ KCG+ D + F+E+ +D+ W +M++ Y
Sbjct: 130 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 189
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLC 247
+ ++AL +F+K EG+ +S+TI S SA L + + +HGY I L+ DL
Sbjct: 190 KGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLL 249
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML--TGYIQNGQASEALLLFD---- 301
+ NS+V YA+C +VE AR F M+++ DL+SWN+ML TG+ Q G AL F
Sbjct: 250 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHI 309
Query: 302 -------------------------------------EMQNSDCKPNPVTALILVSACTY 324
EM S+ + N VT + + AC+
Sbjct: 310 ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSK 369
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L + + G++ H +II + + N+++DMY +CG + + +F D+ P +R++ SWN
Sbjct: 370 LAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF-DLMP-QRDLVSWN 427
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TK 443
V+I+ YGMHG G A+ F Q G+KP+HITFT++LSACSH+GLI+EG K F M T+
Sbjct: 428 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 487
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
++ P V+ YACMVD+L RAG E + I++MP PN +VWG+LL ACRIH E
Sbjct: 488 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 547
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
AA YLF+LEP+ +G +VLM+NIY+A+ +W + K+R MK +G+ KP S IE + +
Sbjct: 548 AARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLH 607
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D +P +++ K+ES+ +IK GY+PD + L DV+++++E L HSEK+A+
Sbjct: 608 SFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIAL 667
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AFG+++ T +++ KNLRVC DCHSA +FIS + +R II+RD RFHHF G CSC D
Sbjct: 668 AFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGD 727
Query: 679 YW 680
YW
Sbjct: 728 YW 729
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/725 (36%), Positives = 417/725 (57%), Gaps = 60/725 (8%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+ C L S+ R+IHS + ++ + + LG+K++ Y T G+ R +F+ +
Sbjct: 104 YCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGV-LGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 69 HNDKSYSF-----------------------------------------------LWNTM 81
N+K + + WN+M
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I Y +NG + L+L+ M GI+++ T V+ C++ ++L G+ +HG I+ F
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+ + L+DMY+K G + +VF+ M R +VSWT MI Y + + ++ LF +
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE 342
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
++EG+ D TI ++ A G + + VH Y N DL + N+++ MYA+CG+
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGS 402
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+ A VF M+ +D++SWN+M+ GY +N +EAL LF EMQ + KPN +T ++ A
Sbjct: 403 MGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNSKPNSITMACILPA 461
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C L + + G++ HG+I+ + +D + NA++DMY KCG L A +F+ I E+++
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMI--PEKDLV 519
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SW V+IAGYGMHG+G +A+ F++M G++PD ++F SIL ACSH+GL+DEG F M
Sbjct: 520 SWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMM 579
Query: 442 -TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
++P+ +HYAC+VD+L RAG L +A+ IK MP+ P+ ++WGALL CRI+
Sbjct: 580 RNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKL 639
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
E A ++F+LEPE+TGY+VL++NIYA + KW EV KLRE + +GL+K S IE
Sbjct: 640 AEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKG 699
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F T D +P ++ ++ +K G+ P + AL +D ++E L HSEK
Sbjct: 700 KVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEK 759
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
+A+AFGI++L P V+VTKNLRVC DCH +F+S + +R II+RD+NRFHHF+ G+CS
Sbjct: 760 IAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCS 819
Query: 676 CNDYW 680
C +W
Sbjct: 820 CRGHW 824
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 206/438 (47%), Gaps = 61/438 (13%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG------- 164
T+ VL+ CA I +G+ +H I D + + LV MY CG +G
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 165 ------------------------------------------CKVFDEMSVRDLVSWTVM 182
K+FDE+ RD++SW M
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I+ Y E+ L LF++ G+ +D T+VSV + G +L +A+HGYAI +F
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
++L + N ++ MY++ GN+ A VF+ M +R ++SW SM+ GY + G + ++ LF E
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE 342
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M+ P+ T ++ AC G + G+ H YI + M+ D + NA+MDMYAKCG
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGS 402
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
+ A ++F+++ +++ SWN +I GY + +AL F +M + KP+ IT IL
Sbjct: 403 MGDAHSVFSEMQV--KDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACIL 459
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLP 479
AC+ ++ G++ + + + +VDM + G L A FDMI P
Sbjct: 460 PACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMI-----P 514
Query: 480 PNDSV-WGALLLACRIHG 496
D V W ++ +HG
Sbjct: 515 EKDLVSWTVMIAGYGMHG 532
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/665 (39%), Positives = 385/665 (57%), Gaps = 43/665 (6%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
+ +L ++HS + + + L K++ Y+ GE + AR +F+ +K+ F +N M
Sbjct: 51 IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDR-SLEKNVVF-FNVM 108
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
IR+Y NN VE L ++ M + + YTFP VLKAC+ + G VH I++ G
Sbjct: 109 IRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
++ ++ ALV MY KCG + KV D+M RD+VSW M+ Y Q+ + ++AL + ++
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
L D+ T+ S++ V C LE N
Sbjct: 229 MDSLNLNHDAGTMASLSPVV-----------------CYTSLE----------------N 255
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
V+ +F+ M K++LISWN M+ Y+ N +EA+ LF +M+ KP+ VT L+ A
Sbjct: 256 VQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C L + LGR+ H YI N++ + L NA++DMYAKCG L+ A ++F+ + R+V
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRL--RDVV 373
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SW +++ YG G G A+ F++ML+ G PD I F S+LSACSH GL+D+GR F M
Sbjct: 374 SWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMM 433
Query: 442 T-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
T + + P ++H+ACMVD+ GRAG + EA+ IKQMP+ PN+ VWGALL ACR+H
Sbjct: 434 TEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDI 493
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G +AA+ LFQL P+ +GY+VL+SNIYA + W++V +R MK G+KK S +E
Sbjct: 494 GLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNG 553
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D+ +P K +Y +++ + ++K GY+P ALHDVE ED+E L HSEK
Sbjct: 554 QVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEK 613
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+ F I+N +++TKNLRVC DCH A + IS I R IIVRD NRFHHF G CS
Sbjct: 614 LAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICS 673
Query: 676 CNDYW 680
C DYW
Sbjct: 674 CGDYW 678
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 132/290 (45%), Gaps = 25/290 (8%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
G + G +D L+ C + SL H + T + L ++ YT+ ++
Sbjct: 212 GYAQSGQFDDALEICKEMDSLNLNHDAGTMASL---------SPVVCYTSLENVQYIHNM 262
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F + S WN MI Y NN E + L+ M G+ ++ T +L AC S
Sbjct: 263 FERMTKKNLIS--WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLS 320
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ G+ +H I + + ++ AL+DMYAKCG ++ VFD+M +RD+VSWT M++
Sbjct: 321 ALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMS 380
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH-------GYA 237
AY ++ + +A+ LF K G DS+ VSV SA G L Q H Y
Sbjct: 381 AYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG--LLDQGRHYFRMMTEQYG 438
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKA-RLVFDMMEKRDLISWNSMLTG 286
I C +V ++ R G VE+A + M + + W ++L+
Sbjct: 439 IVPRIEHFAC----MVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
Y G + L + +IN +++ID TL +M Y+ G+ A +F+ E+NV +
Sbjct: 48 YPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFD--RSLEKNVVFF 105
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
NV+I Y + +AL F ML PDH TF +L ACS + G + + K
Sbjct: 106 NVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVK 165
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ + + +V M G+ GCL EA ++ QMP
Sbjct: 166 VGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP 199
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 499 bits (1286), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/679 (38%), Positives = 395/679 (58%), Gaps = 43/679 (6%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
TE Q+L + L+++HS + ++ LG K++ Y GEP + R +F+
Sbjct: 1026 TENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDE 1085
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I K +N MIR+Y NN + L ++ M GI + YT+P VLKA + + +
Sbjct: 1086 I--PKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLW 1143
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +H ++R G + +V L+ MY KCG + C+V DZM RD+VSW ++
Sbjct: 1144 VGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCA 1203
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ + ++AL + ++ + GL D+ T+ S+ AV + C
Sbjct: 1204 RNGQFDDALEVCKEMELLGLKPDAGTMASLLPAV----------------------TNTC 1241
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N V + +F + + L+SWN M+ Y+ N +EA+ +F +M++
Sbjct: 1242 LDN-----------VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA 1290
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
P+ ++ ++ AC L + LGR+ H Y++ ++ + L NA++DMYAKCG L+ A
Sbjct: 1291 VDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAR 1350
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + R+V SW +I+ YGM+G GR A+ FS+M + G+ PD I F S+LSACSH
Sbjct: 1351 EVFDQM--KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH 1408
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL+DEGR F MT+ + P ++H+ CMVD+LGRAG + EA+ IKQMP+ PN+ VWG
Sbjct: 1409 AGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWG 1468
Query: 487 ALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
ALL ACR++ G +AA+ LFQL PE +GY+VL+SNIYA + +W +V +R MK KG
Sbjct: 1469 ALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKG 1528
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+KK S E + F D+ +P K++Y++++ + ++K AGY+P+ ALHDVE
Sbjct: 1529 IKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVE 1588
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
+ED+E L HSEKLA+AF I+N P + +++TKNLRVC DCH A + IS I R+I +R
Sbjct: 1589 EEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIR 1648
Query: 662 DANRFHHFEGGTCSCNDYW 680
D NRFHHF G CSC DYW
Sbjct: 1649 DTNRFHHFYNGVCSCGDYW 1667
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 259/679 (38%), Positives = 394/679 (58%), Gaps = 43/679 (6%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
TE Q+L + L+++HS + ++ LG K++ Y GEP + R +F+
Sbjct: 37 TENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDE 96
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I K +N MIR+Y NN + L ++ M GI + YT+P VLKA + + +
Sbjct: 97 I--PKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLW 154
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +H ++R G + +V L+ MY KCG + C+V D+M RD+VSW ++
Sbjct: 155 VGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCA 214
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ + ++AL + ++ + GL D+ T+ S+ AV + C
Sbjct: 215 RNGQFDDALEVCKEMELLGLKPDAGTMASLLPAV----------------------TNTC 252
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N V + +F + + L+SWN M+ Y+ N +EA+ +F +M++
Sbjct: 253 LDN-----------VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA 301
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
P+ ++ ++ AC L + LGR+ H Y++ ++ + L NA++DMYAKCG L+ A
Sbjct: 302 VDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAR 361
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + R+V SW +I+ YGM+G GR A+ FS+M + G+ PD I F S+LSACSH
Sbjct: 362 EVFDQM--KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH 419
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL+DEGR F MT+ + P ++H+ CMVD+LGRAG + EA+ IKQMP+ PN+ VWG
Sbjct: 420 AGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWG 479
Query: 487 ALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
ALL ACR++ G +AA+ LFQL PE +GY+VL+SNIYA + +W +V +R MK KG
Sbjct: 480 ALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKG 539
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+KK S E + F D+ +P K++Y++++ ++K AGY+P+ ALHDVE
Sbjct: 540 IKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVE 599
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
+ED+E L HSEKLA+AF I+N P + +++TKNLRVC DCH A + IS I R+I +R
Sbjct: 600 EEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIR 659
Query: 662 DANRFHHFEGGTCSCNDYW 680
D NRFHHF G CSC DYW
Sbjct: 660 DTNRFHHFYNGVCSCGDYW 678
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/665 (39%), Positives = 385/665 (57%), Gaps = 43/665 (6%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
+ +L ++HS + + + L K++ Y+ GE + AR +F+ +K+ F +N M
Sbjct: 51 IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDR-SLEKNVVF-FNVM 108
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
IR+Y NN VE L ++ M + + YTFP VLKAC+ + G VH I++ G
Sbjct: 109 IRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
++ ++ ALV MY KCG + KV D+M RD+VSW M+ Y Q+ + ++AL + ++
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
L D+ T+ S++ V C LE N
Sbjct: 229 MDSLNLNHDAGTMASLSPVV-----------------CYTSLE----------------N 255
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
V+ +F+ M K++LISWN M+ Y+ N +EA+ LF +M+ KP+ VT L+ A
Sbjct: 256 VQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C L + LGR+ H YI N++ + L NA++DMYAKCG L+ A ++F+ + R+V
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRL--RDVV 373
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SW +++ YG G G A+ F++ML+ G PD I F S+LSACSH GL+D+GR F M
Sbjct: 374 SWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMM 433
Query: 442 T-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
T + + P ++H+ACMVD+ GRAG + EA+ IKQMP+ PN+ VWGALL ACR+H
Sbjct: 434 TEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDI 493
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G +AA+ LFQL P+ +GY+VL+SNIYA + W++V +R MK G+KK S +E
Sbjct: 494 GLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNG 553
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D+ +P K +Y +++ + ++K GY+P ALHDVE ED+E L HSEK
Sbjct: 554 QVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVEDKECHLAIHSEK 613
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+ F I+N +++TKNLRVC DCH A + IS I R IIVRD NRFHHF G CS
Sbjct: 614 LAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDCNRFHHFSNGICS 673
Query: 676 CNDYW 680
C DYW
Sbjct: 674 CGDYW 678
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 132/290 (45%), Gaps = 25/290 (8%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
G + G +D L+ C + SL H + T + L ++ YT+ ++
Sbjct: 212 GYAQSGQFDDALEICKEMDSLNLNHDAGTMASL---------SPVVCYTSLENVQYIHNM 262
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F + S WN MI Y NN E + L+ M G+ ++ T +L AC S
Sbjct: 263 FERMTKKNLIS--WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLS 320
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ G+ +H I + + ++ AL+DMYAKCG ++ VFD+M +RD+VSWT M++
Sbjct: 321 ALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMS 380
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH-------GYA 237
AY ++ + +A+ LF K G DS+ VSV SA G L Q H Y
Sbjct: 381 AYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG--LLDQGRHYFRMMTEQYG 438
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKA-RLVFDMMEKRDLISWNSMLTG 286
I C +V ++ R G VE+A + M + + W ++L+
Sbjct: 439 IVPRIEHFAC----MVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
Y G + L + +IN +++ID TL +M Y+ G+ A +F+ E+NV +
Sbjct: 48 YPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFD--RSLEKNVVFF 105
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
NV+I Y + +AL F ML PDH TF +L ACS + G + + K
Sbjct: 106 NVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVK 165
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ + + +V M G+ GCL EA ++ QMP
Sbjct: 166 VGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP 199
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/659 (38%), Positives = 385/659 (58%), Gaps = 43/659 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A S+F +I +WNTM R +A + V L+LY M G+ NSYTFPF+LK+C
Sbjct: 16 AISVFETIQEPNL--LIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSC 73
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------- 169
A EG +HG +++ G+ D YV +L+ MY + + +D KVFD
Sbjct: 74 AKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYT 133
Query: 170 --------------------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
E+ V+D+VSW MI+ Y + +EAL LF++ + +
Sbjct: 134 ALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRP 193
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D T+V+V SA + G + + VH + + F +L I N+++ Y++CG +E A +F
Sbjct: 194 DESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLF 253
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+ +D+ISWN ++ GY EALLLF EM S PN VT L ++ AC +LG+
Sbjct: 254 LGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAID 313
Query: 330 LGRKFHGYIINSNMKID--ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
+GR H YI + ++LR +++DMY+KCGD++ A +FN + +++ +WN +I
Sbjct: 314 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM--LHKSLPAWNAMI 371
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSV 446
G+ MHG A + FS+M + +KPD ITF +LSACSHAG++D GR F MT +
Sbjct: 372 FGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKI 431
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----AN 501
P+++HY CM+D+LG +G EA +MI M + P+ +W +LL AC++HG + A
Sbjct: 432 TPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQ 491
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
LF++EP + G +VL+SNIYA + +W EV ++R + +KG+KK S IE + F
Sbjct: 492 NLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFI 551
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
D+ +P +E+Y +E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG
Sbjct: 552 IGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFG 611
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ PE + + KNLRVC +CH A + IS IY+R+II RD RFHHF G CSCNDYW
Sbjct: 612 LISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/686 (38%), Positives = 403/686 (58%), Gaps = 37/686 (5%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H G +Q ++ Y G + +++LF S + S WNTMI ++
Sbjct: 217 KQLHGYSLRVG--DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVS--WNTMISSF 272
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG-FLSD 144
+ + E L + M G+ + T VL AC+ + GK +H ++R + +
Sbjct: 273 SQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIEN 332
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF-QKTQ 203
S+V +ALVDMY C Q + G +VFD + R + W MI+ Y + E+ALILF + +
Sbjct: 333 SFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIK 392
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
GLL ++ T+ SV A +++HGYA+ F ED +QN+++ MY+R G ++
Sbjct: 393 VAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMD 452
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC--------------- 308
+ +FD ME RD +SWN+M+TGY+ +G+ S AL+L EMQ +
Sbjct: 453 ISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGG 512
Query: 309 --KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
KPN +T + ++ C L + G++ H Y I + + D T+ +A++DMYAKCG L+ +
Sbjct: 513 PYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLS 572
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-----VKPDHITFTSI 421
+FN++ +NV +WNVLI GMHG G +ALE F M+ E KP+ +TF ++
Sbjct: 573 RRVFNEM--PNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITV 630
Query: 422 LSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
+ACSH+GLI EG F M V+P HYAC+VD+LGRAG L EA++++ MP
Sbjct: 631 FAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEF 690
Query: 481 ND-SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
+ W +LL ACRIH GE+AA L LEP ++VL+SNIY+++ W + ++R
Sbjct: 691 DKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVR 750
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
++M+ G+KK S IE+ ++ F D +P ++++ +E+++ +++ GY+PD S
Sbjct: 751 KNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTS 810
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
C LH+V+++++E++L HSEKLA+AFGI+N P ++V KNLRVCNDCH+A +FIS I
Sbjct: 811 CVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIM 870
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R+IIVRD RFHHF+ GTCSC DYW
Sbjct: 871 EREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 205/393 (52%), Gaps = 9/393 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W +R+ + E + Y M SG +++ FP VLKA + + G+ +H +
Sbjct: 60 WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAV 119
Query: 138 RTGFLSDSYVQA-ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ G+ S S A LV+MY KCG D CKVFD ++ RD VSW I A + EK E+AL
Sbjct: 120 KFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQAL 179
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLG---DVLKAQAVHGYAICNAFLEDLCIQNSIV 253
F+ Q E + S T+VSVA A LG + + +HGY++ + N+++
Sbjct: 180 EAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSL-RVGDQKTFTNNALM 238
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
AMYA+ G V+ ++ +F+ RD++SWN+M++ + Q+ + SEAL F M + + V
Sbjct: 239 AMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGV 298
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT-LRNAVMDMYAKCGDLDTAENMFND 372
T ++ AC++L +G++ H Y++ +N I+ + + +A++DMY C +++ +F+
Sbjct: 299 TIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFD- 357
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHAGLI 431
H R + WN +I+GY +G KAL F +M++ G+ P+ T S++ AC H
Sbjct: 358 -HILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAF 416
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
KL K + ++DM R G
Sbjct: 417 SNKESIHGYAVKLGFKEDRYVQNALMDMYSRMG 449
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 135/270 (50%), Gaps = 7/270 (2%)
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
R SW + + ++ EA+ + + G D+ +V AV L D+ + +
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 234 HGYAICNAF-LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
H A+ + + + N++V MY +CG + VFD + RD +SWNS + + +
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLG---SRQLGRKFHGYIINSNMKIDATL 349
+AL F MQ + + + T + + AC+ LG +LG++ HGY + + T
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFT- 233
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
NA+M MYAK G +D ++ +F +R++ SWN +I+ + +AL FF M+ E
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESF--VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFA 439
GV+ D +T S+L ACSH +D G++ A
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHA 321
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/656 (38%), Positives = 398/656 (60%), Gaps = 18/656 (2%)
Query: 40 QALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYS 99
+AL ++ + E +LFN + DK+ F WN++I A +G E L +S
Sbjct: 7 KALFCSVSRLLHTERHTERQNLTTLFNR-YVDKTDVFSWNSVIADLARSGDSAEALLAFS 65
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
+MR+ + +FP +KAC+S I GK H G+ SD +V +AL+ MY+ CG
Sbjct: 66 SMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG 125
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF------QKTQQEGLLSDSVT 213
+ +D KVFDE+ RD+VSWT MI Y+ +A+ LF + + + DS+
Sbjct: 126 KLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMG 185
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG--NVEKARLVFDM 271
+VSV SA ++ +++H + I F + + N+++ YA+ G V AR +FD
Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQ 245
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQL 330
+ +D +S+NS+++ Y Q+G ++EA +F + +N N +T ++ A ++ G+ ++
Sbjct: 246 IVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI 305
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G+ H +I ++ D + +++DMY KCG ++TA F+ + +NV SW +IAGY
Sbjct: 306 GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM--KNKNVRSWTAMIAGY 363
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPE 449
GMHGH KALE F M++ GV+P++ITF S+L+ACSHAGL EG + F M + V+P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLF 504
++HY CMVD+LGRAG L +A+D+I++M + P+ +W +LL ACRIH EI+ LF
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
+L+ + GY++L+S+IYA + +W++V ++R MKN+GL KP FS++E ++ F D
Sbjct: 484 ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
+P +++Y+ + + ++ AGY+ + S HDV++E++E L HSEKLA+AFGIMN
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMN 603
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P + V V KNLRVC+DCH+ + IS I R+ +VRDA RFHHF+ G CSC DYW
Sbjct: 604 TVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/706 (36%), Positives = 412/706 (58%), Gaps = 46/706 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSLFNSIHND 71
LL+ C + L+QIHS GL + L K +I + E AR +F++I
Sbjct: 13 LLEKCKSMYQLKQIHSHTIKMGLSSDPLF--QKRVIAFCCAHESGKMIYARQVFDAI--P 68
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ F+WNTMI+ Y+ H + +Y M S I + +TFPF+LK N + GKV
Sbjct: 69 QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+ ++ GF S+ +VQ A + M++ C D KVFD ++V+W +M++ Y + ++
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+++ +LF + ++ G+ +SVT+V + SA +L D+ + ++ Y +L ++N
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENV 248
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS----------------- 294
++ M+A CG +++A+ VFD M+ RD+ISW S++TG+ GQ
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSW 308
Query: 295 --------------EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
EAL LF EMQ S+ KP+ T + +++AC +LG+ +LG YI
Sbjct: 309 TAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 368
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+++K D + NA++DMY KCG++ A+ +F ++H ++ +W +I G ++GHG +AL
Sbjct: 369 NSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDK--FTWTAMIVGLAINGHGEEAL 426
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDM 459
FS M+E + PD IT+ +L AC+HAG++++G+ F MT + +KP V HY CMVD+
Sbjct: 427 AMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDL 486
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYF 514
LGRAG L EA ++I MP+ PN VWG+LL ACR+H E+AA + +LEPE+ +
Sbjct: 487 LGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVY 546
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
VL+ NIYAA +W + ++R+ M +G+KK S++E ++ F D+ +P KE+Y
Sbjct: 547 VLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIY 606
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
K+E+M ++ AGY PD S D+ +ED+E L HSEKLA+A+ +++ P +++
Sbjct: 607 AKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIV 666
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C DCH + +S Y R++IVRD RFHHF G+CSCN++W
Sbjct: 667 KNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/675 (37%), Positives = 399/675 (59%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C+ + +L +Q HS +G+ + + GA + + Y + TA F S +
Sbjct: 378 LLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDL-YVKCSDIKTAHEFFLSTETE 436
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
LWN M+ AY + E+ ++++ M+ GI N +T+P +L+ C+S + G+
Sbjct: 437 NV--VLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQ 494
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +++TGF + YV + L+DMYAK G+ D K+F + +D+VSWT MI Y Q EK
Sbjct: 495 IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEK 554
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EAL LF++ Q +G+ SD++ S SA + + + Q +H A + + +DL + N+
Sbjct: 555 FAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNA 614
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V++YARCG V A FD + +D ISWNS+++G+ Q+G EAL LF +M + + N
Sbjct: 615 LVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEIN 674
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T VSA + + +LG++ H II + + + N ++ +YAKCG++D AE F
Sbjct: 675 SFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFF 734
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ E+N SWN ++ GY HGHG KAL F M + GV P+H+TF +LSACSH GL+
Sbjct: 735 EM--PEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLV 792
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
DEG K F M ++ + P+ +HYAC+VD+LGR+G L A +++MP+ P+ V LL
Sbjct: 793 DEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLS 852
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC +H GE AA++L +LEP+ + +VL+SN+YA + KW + R+ MK++G+KK
Sbjct: 853 ACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKE 912
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F D+ +P ++Y+ + + GY+P + L+D E +
Sbjct: 913 PGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQK 972
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
HSEKLA+AFG+++L+ + V KNLRVC DCH+ +++S I R I+VRD+ R
Sbjct: 973 GPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYR 1032
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+GG CSC DYW
Sbjct: 1033 FHHFKGGICSCKDYW 1047
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 234/468 (50%), Gaps = 12/468 (2%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
+ +IH+ T G N +L + +I Y G N+A+ +F+ + S S W M+
Sbjct: 189 VEKIHARTITHGYEN-SLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVS--WVAMLSG 245
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ +G E + L+ M SG+ Y F VL AC G+ +HG +++ GF +
Sbjct: 246 LSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLE 305
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+YV ALV +Y++ G +VF+ M RD VS+ +I+ Q ++AL LF+K
Sbjct: 306 TYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCL 365
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+ L D VT+ S+ SA +G +L + H YAI D+ ++ +++ +Y +C +++
Sbjct: 366 DCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKT 425
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A F E +++ WN ML Y +E+ +F +MQ +PN T ++ C+
Sbjct: 426 AHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSS 485
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L + LG + H ++ + + + + + ++DMYAK G LD A +F + E++V SW
Sbjct: 486 LRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRL--KEKDVVSWT 543
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
+IAGY H +AL F +M ++G+ D+I F S +SAC+ +++G++ A
Sbjct: 544 AMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVS 603
Query: 445 SVKPEVKHYACMVDMLGRAGCL---YEAFDMIKQMPLPPNDSVWGALL 489
++ +V + R G + Y AFD I ++ W +L+
Sbjct: 604 GYSDDLSVGNALVSLYARCGKVRDAYFAFDKI----FSKDNISWNSLI 647
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 208/410 (50%), Gaps = 6/410 (1%)
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS 143
AY+N+ + M G+ +NS T+ ++L C S+ +G +HG I++ GF +
Sbjct: 42 AYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCA 101
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
+ + L+D+Y G D VFDEM VR L W ++ + + L LF++
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLK--AQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
QE + D T V G GDV + +H I + + L + N ++ +Y + G
Sbjct: 162 QEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGF 220
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+ A+ VFD ++KRD +SW +ML+G Q+G EA+LLF +M S P P ++SA
Sbjct: 221 LNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSA 280
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
CT + ++G + HG ++ ++ + NA++ +Y++ G+ AE +FN + +R+
Sbjct: 281 CTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAM--LQRDEV 338
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
S+N LI+G G+ KALE F +M + +KPD +T S+LSACS G + G++ +
Sbjct: 339 SYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYA 398
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
K + ++ ++D+ + + A + N +W +L+A
Sbjct: 399 IKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTE-TENVVLWNVMLVA 447
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 13/303 (4%)
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
T + AY E + ++ G+ ++S T + + G +HG +
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
F ++ + ++ +Y G+++ A VFD M R L WN +L ++ A L L
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLG----RKFHGYIINSNMKIDATLRNAVMD 355
F M KP+ T ++ C G + K H I + + N ++D
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGC---GGGDVPFHCVEKIHARTITHGYENSLFVCNPLID 213
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+Y K G L++A+ +F+ + +R+ SW +++G G +A+ F QM GV P
Sbjct: 214 LYFKNGFLNSAKKVFDGLQ--KRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTP 271
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC--MVDMLGRAGCLYEAFDMI 473
F+S+LSAC+ G + + K E Y C +V + R G A +
Sbjct: 272 YIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLET--YVCNALVTLYSRLGNFIPAEQVF 329
Query: 474 KQM 476
M
Sbjct: 330 NAM 332
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/684 (37%), Positives = 408/684 (59%), Gaps = 33/684 (4%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGL-INQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
+L+ C LA L R++H++L SG +N + +++ YT G ++A +F I +
Sbjct: 272 VLQVCTELAQLNLGRELHAALLKSGSEVNIQCN---ALLVMYTKCGRVDSALRVFREI-D 327
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
+K Y WN+M+ Y NG E +E S M R G + + A +L GK
Sbjct: 328 EKDY-ISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGK 386
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
VH I+ SD+ V L+DMY KC + VFD M ++D +SWT +IT Y Q+
Sbjct: 387 EVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSS 446
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+ EAL +F++ Q+EG+ D + I S+ A L +L A+ +H YAI N L DL ++N
Sbjct: 447 RHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKN 505
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
I+ +Y CG V + +F+ +E++D+++W SM+ Y +G +EAL+LF EMQ++D +P
Sbjct: 506 RIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQP 565
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ V + ++ A L S G++ HG++I N ++ + ++++DMY+ CG L A +F
Sbjct: 566 DSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVF 625
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
N + +++ W +I GMHGHG++A++ F +ML+ GV PDH++F ++L ACSH+ L
Sbjct: 626 NAVKC--KDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKL 683
Query: 431 IDEGRKCFADM--TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
++EG KC+ DM + ++P +HYAC+VD+LGR+G EA++ IK MPL P VW +L
Sbjct: 684 VNEG-KCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSL 742
Query: 489 LLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L ACR+H +AAN L +LEP++ G +VL+SN++A KW ++R + +GL+
Sbjct: 743 LGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLR 802
Query: 544 KPAAFSVIEYGKDIQGFHT-------ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCA 596
K A S IE G ++ F T A+R+N E+ +++ K GY D
Sbjct: 803 KDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLR------KEGGYTEDTRSV 856
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
LHDV +E++ +L+ HSE+LA++FG++N P +++ KNLRVC DCH + +S ++ R
Sbjct: 857 LHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDR 916
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
I+VRDANRFHHF GG+CSC D+W
Sbjct: 917 DIVVRDANRFHHFSGGSCSCGDFW 940
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/520 (28%), Positives = 266/520 (51%), Gaps = 20/520 (3%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
++H GL +++ + +I Y G ++A +F +H+ + + WN+MI
Sbjct: 185 EVHGLAVKHGL-DRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVAS-WNSMISGCL 242
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG ++ L+L+ M+R+ +S NSYT VL+ C + + G+ +H ++++G S+
Sbjct: 243 QNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG--SEVN 300
Query: 147 VQA-ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+Q AL+ MY KCG+ D +VF E+ +D +SW M++ Y Q EA+ + +
Sbjct: 301 IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRG 360
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G D IVS++SAVG LG +L + VH YAI D + N+++ MY +C +E +
Sbjct: 361 GFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYS 420
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VFD M +D ISW +++T Y Q+ + EAL +F E Q K +P+ ++ AC+ L
Sbjct: 421 AHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGL 480
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ L ++ H Y I + + +D ++N ++D+Y +CG++ + MF + ++++ +W
Sbjct: 481 ETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVE--QKDIVTWTS 537
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+I Y G +AL F++M V+PD + SIL A + +G++ + + +
Sbjct: 538 MINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRN 597
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-IAANYLF 504
E + +VDM G L A + + + +W A++ A +HG A LF
Sbjct: 598 FHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKC-KDMVLWTAMINATGMHGHGKQAIDLF 656
Query: 505 Q------LEPEHTGYFVLMSNIYAAS-NKWREVGKLREDM 537
+ + P+H + L+ YA S +K GK DM
Sbjct: 657 KRMLQTGVTPDHVSFLALL---YACSHSKLVNEGKCYLDM 693
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 202/386 (52%), Gaps = 10/386 (2%)
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
T ++ G+ + L L T + G S + +VL A+ + +G VH + T
Sbjct: 29 TSLKQLCKEGNLRQALRLL-TSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVAT 87
Query: 140 GFLS--DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
G L D ++ L+ MY KCG+ D +FD MS R + SW +I AY + EAL
Sbjct: 88 GSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALG 147
Query: 198 LFQK---TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+++ + G+ D T+ SV A G GD VHG A+ + + N+++A
Sbjct: 148 VYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIA 207
Query: 255 MYARCGNVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
MYA+CG ++ A VF++M + RD+ SWNSM++G +QNG +AL LF MQ + N
Sbjct: 208 MYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSY 267
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T + ++ CT L LGR+ H ++ S +++ NA++ MY KCG +D+A +F +I
Sbjct: 268 TTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRVDSALRVFREI 326
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
E++ SWN +++ Y +G +A+EF S+ML G +PDH S+ SA H G +
Sbjct: 327 --DEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLN 384
Query: 434 GRKCFADMTKLSVKPEVKHYACMVDM 459
G++ A K + + + ++DM
Sbjct: 385 GKEVHAYAIKQRLDSDTQVGNTLMDM 410
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 7/255 (2%)
Query: 227 VLKAQAVHGYAICNAFLE--DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
V + VH +A+ LE D + ++ MY +CG V ARL+FD M R + SWN+++
Sbjct: 74 VAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALI 133
Query: 285 TGYIQNGQASEALLLFDEMQ---NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
Y+ +G A EAL ++ M+ S P+ T ++ A G + G + HG +
Sbjct: 134 GAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKH 193
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + NA++ MYAKCG LD+A +F +H R+V+SWN +I+G +G +AL+
Sbjct: 194 GLDRSTFVANALIAMYAKCGILDSAMRVFELMHDG-RDVASWNSMISGCLQNGMFLQALD 252
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLG 461
F M + + T +L C+ ++ GR+ A + K + ++ A +V M
Sbjct: 253 LFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYT 311
Query: 462 RAGCLYEAFDMIKQM 476
+ G + A + +++
Sbjct: 312 KCGRVDSALRVFREI 326
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 258/678 (38%), Positives = 399/678 (58%), Gaps = 15/678 (2%)
Query: 13 DQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKII--IKYTTYGEPNTARSLFNSIHN 70
D L C ++ +Q H+ L + L++ L +K+I + + G+ N AR LF + N
Sbjct: 15 DFLKTHCTSISKTKQAHALLLRTHLLHNPL-FSSKLISFLALSHSGDLNYARKLFTQMQN 73
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
F+ NTMIR YA + + E + LY M G+ ++YT+PFVL ACA + G+
Sbjct: 74 PDP--FICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGR 131
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
H ++++ GF SD +V AL+ Y CG C VFDE +VRD+V+W +MI A+
Sbjct: 132 RFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKG 191
Query: 191 KPEEAL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
E+A +L + T+ + L D VT+VS+ A QLG++ + + +H Y+ E+L +
Sbjct: 192 LSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVN 251
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N+I+ MY +C ++E A+ VF+ + ++D++SW SML+G ++G EAL LF +MQ + +
Sbjct: 252 NAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIE 311
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ +T + ++SAC G+ G+ H I + D L A++DMYAKCG +D A +
Sbjct: 312 LDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQV 371
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F + RNV +WN LI G MHGHG A+ F QM + + PD +TF ++L ACSHAG
Sbjct: 372 FRRMRV--RNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAG 429
Query: 430 LIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+DEG F M K ++P ++HY C+VD+L RA + +A I+ MP+ N +W L
Sbjct: 430 LVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATL 489
Query: 489 LLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L ACR G E + +LEP+ G +V++SN+YA ++W KLR+ MKNKG++
Sbjct: 490 LGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIE 549
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM-AGYMPDLSCALHDVED 602
K S IE I F DR + +++Y +E M + + G++P + L D+E+
Sbjct: 550 KTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEE 609
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
E++EH L HSEKLA+A G+++ + +++ KNLRVCNDCHS + S +Y R+I+ RD
Sbjct: 610 EEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARD 669
Query: 663 ANRFHHFEGGTCSCNDYW 680
+RFHHF+ G+CSC D+W
Sbjct: 670 RSRFHHFKEGSCSCMDFW 687
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/672 (39%), Positives = 389/672 (57%), Gaps = 47/672 (6%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
Q+L + L +LR +HS + + L + LG K++ Y + + TAR +F+ I +
Sbjct: 48 QVLDTYPDLKTLRTVHSRIISEDLRYNS-SLGVKLMRAYASLKDVATARKVFDEI--PER 104
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ N MIR+Y NNG E ++++ TM + + YTFP VLKAC+ + I+ GK +H
Sbjct: 105 NVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIH 164
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G + G S +V LV MY KCG + V DEMS RD+VSW ++ Y Q ++ +
Sbjct: 165 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFD 224
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+AL + ++ + + D+ T+ S+ AV N E
Sbjct: 225 DALEVCREMESVKISHDAGTMASLLPAVS-----------------NTTTE--------- 258
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
NV + +F M K+ L+SWN M+ Y++N EA+ L+ M+ +P+ V
Sbjct: 259 -------NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAV 311
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
+ ++ AC + LG+K HGYI + + L NA++DMYAKCG LD A ++F ++
Sbjct: 312 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENM 371
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
R+V SW +I+ YG G G A+ FS+M + G+ PD I F + L+ACSHAGL++E
Sbjct: 372 --KSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEE 429
Query: 434 GRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
GR CF MT + P ++H ACMVD+LGRAG + EA+ I++MP+ PN+ VWGALL AC
Sbjct: 430 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGAC 489
Query: 493 RIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+H G +AA+ LFQL PE +GY+VL+SNIYA + +W EV +R MK+KGLKK
Sbjct: 490 RVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPG 549
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S +E + I F DR +P E+Y++++ + ++K GY+PD ALHDVE+ED+E
Sbjct: 550 ASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKET 609
Query: 608 MLNYHSEKLAVAFGIMNLTPE---AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
L HSEKLA+ F +MN E +++TKNLR+C DCH A + IS I R+II+RD N
Sbjct: 610 HLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTN 669
Query: 665 RFHHFEGGTCSC 676
RFH F G CSC
Sbjct: 670 RFHVFRFGVCSC 681
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/656 (38%), Positives = 397/656 (60%), Gaps = 18/656 (2%)
Query: 40 QALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYS 99
+AL ++ + E +LFN + DK+ F WN++I A +G E L +S
Sbjct: 7 KALFCSVSRLLHTERHTERQNLTTLFNR-YVDKTDVFSWNSVIADLARSGDSAEALRAFS 65
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
+MR+ + +FP +KAC+S I GK H G+ SD +V +AL+ MY+ CG
Sbjct: 66 SMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG 125
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE------GLLSDSVT 213
+ +D KVFDE+ R++VSWT MI Y+ +A+ LF+ E + DS+
Sbjct: 126 KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMG 185
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG--NVEKARLVFDM 271
+VSV SA ++ +++H + I F + + N+++ YA+ G V AR +FD
Sbjct: 186 MVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQ 245
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQL 330
+ +D +S+NS+++ Y Q+G ++EA +F + + N +T ++ A ++ G+ ++
Sbjct: 246 IVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRI 305
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G+ H +I ++ D + +++DMY KCG ++TA F+ + +NV SW +IAGY
Sbjct: 306 GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRM--KNKNVRSWTAMIAGY 363
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPE 449
GMHGH KALE F M++ GV+P++ITF S+L+ACSHAGL D G F M + V+P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPG 423
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLF 504
++HY CMVD+LGRAG L +A+D+I++M + P+ +W +LL ACRIH EI+ LF
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
+L+P + GY++L+S+IYA S +W++V ++R MKN+GL KP FS++E ++ F D
Sbjct: 484 ELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
+P +++Y+ + + ++ AGY+ + S HDV++E++E L HSEKLA+AFGIMN
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMN 603
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P + V V KNLRVC+DCH+ + IS I R+ +VRDA RFHHF+ G CSC DYW
Sbjct: 604 TVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/609 (40%), Positives = 370/609 (60%), Gaps = 7/609 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN++I Y G E+++++ M G+ + T +LKAC + L G H ++
Sbjct: 214 WNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVL 273
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
G +D +V +LVDMY+ G T VFD M R L+SW MI+ Y Q E+
Sbjct: 274 ALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYA 333
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF++ Q G DS T+VS+ Q D+ + +H I L + +IV MY+
Sbjct: 334 LFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYS 393
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG +++A +VF M K+++I+W +ML G QNG A +AL LF +MQ N VT +
Sbjct: 394 KCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVS 453
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
LV C +LGS GR H + I DA + +A++DMYAKCG + +AE +FN+
Sbjct: 454 LVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNN-EFHL 512
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
++V N +I GYGMHGHGR AL +S+M+EE +KP+ TF S+L+ACSH+GL++EG+
Sbjct: 513 KDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKAL 572
Query: 438 FADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH- 495
F M + V+P+ KHYAC+VD+ RAG L EA +++KQMP P+ V ALL CR H
Sbjct: 573 FHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHK 632
Query: 496 ----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
G A+ L L+ ++G +V++SNIYA + KW V +R M+ +G+KK +S+I
Sbjct: 633 NTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLI 692
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E G + F +D +P W ++Y+ +E++ +E++ GY+PD SC L DV + + +L
Sbjct: 693 EVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWG 752
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSE+LA+AFG+++ +++++TKNLRVC DCH+ ++IS I +R+IIVRDANRFHHF
Sbjct: 753 HSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVN 812
Query: 672 GTCSCNDYW 680
G CSCND+W
Sbjct: 813 GKCSCNDFW 821
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/462 (29%), Positives = 224/462 (48%), Gaps = 11/462 (2%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
F L + N L ++ IH+ + + + ++ L AK+I Y+ G AR++F+
Sbjct: 49 FSSLLHQFSNTLIHVKSIHAQIIKNWVSTESF-LAAKLIRVYSDLGFLGHARNVFDQCSL 107
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
++ + N MI + N +E L+ M I NSYT F LKAC +L+ +
Sbjct: 108 PETA--VCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTD---LLDDE 162
Query: 131 VVHGDI---IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
V I +R GF YV +++V+ K G D KVFD M +D+V W +I Y
Sbjct: 163 VGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYV 222
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q E++ +F + GL VT+ ++ A GQ G H Y + D+
Sbjct: 223 QKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVF 282
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ S+V MY+ G+ A LVFD M R LISWN+M++GY+QNG E+ LF + S
Sbjct: 283 VLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSG 342
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+ T + L+ C+ + GR H II ++ L A++DMY+KCG + A
Sbjct: 343 SGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQAT 402
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F + ++NV +W ++ G +G+ AL+ F QM EE V + +T S++ C+H
Sbjct: 403 IVFGRM--GKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAH 460
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
G + +GR A + + + ++DM + G ++ A
Sbjct: 461 LGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSA 502
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
L+ C L SL R +H+ G A+ + + +I Y G+ ++A LFN+ +
Sbjct: 454 LVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV-ITSALIDMYAKCGKIHSAEKLFNNEFHL 512
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
K L N+MI Y +GH L +YS M + N TF +L AC+ + L+ EGK
Sbjct: 513 KDV-ILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKA 571
Query: 132 VHGDIIRTGFLSDSYVQ-AALVDMYAKCGQTDDGCKVFDEM 171
+ + R + + A LVD++++ G+ ++ ++ +M
Sbjct: 572 LFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQM 612
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/663 (37%), Positives = 390/663 (58%), Gaps = 15/663 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+HS + G+ + L + ++ Y + TA F + + LWN M+ AY
Sbjct: 334 KQLHSYVIKMGM-SSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENV--VLWNVMLVAY 390
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
G+ E+ ++ M+ G+ N YT+P +L+ C S + G+ +H +I++GF +
Sbjct: 391 GQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV 450
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
YV + L+DMYAK G+ D + + D+VSWT MI Y Q + EAL LFQ+ + +
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQ 510
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ SD++ S SA + + + Q +H + + + EDL I N++V++YARCG + A
Sbjct: 511 GIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDA 570
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
L F+ ++ +D ISWN++++G+ Q+G EAL +F +M + + N T VSA
Sbjct: 571 YLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANT 630
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H +I + + N ++ +Y+KCG ++ A+ F ++ E+NV SWN
Sbjct: 631 ANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEM--PEKNVVSWNA 688
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-- 443
+I GY HG+G +A+ F +M + G+ P+H+TF +LSACSH GL++EG F M+K
Sbjct: 689 MITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEH 748
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GE 497
L KPE HY C+VD+LGRA L A + I++MP+ P+ +W LL AC +H GE
Sbjct: 749 GLVPKPE--HYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGE 806
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA +L +LEPE + +VL+SN+YA S KW + R+ MK++G+KK S IE I
Sbjct: 807 FAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSI 866
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F DR++P +++Y+ ++ + GY+ D L+DVE E ++ HSEKLA
Sbjct: 867 HAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLA 926
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VAFG+++LT ++V KNLRVCNDCH+ +F+S I R I+VRDA RFHHFEGG CSC
Sbjct: 927 VAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCK 986
Query: 678 DYW 680
DYW
Sbjct: 987 DYW 989
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 155/507 (30%), Positives = 259/507 (51%), Gaps = 14/507 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y L + C SL +++H+ + SG + + LG+++I Y +GE + A LF+ I
Sbjct: 13 YLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDV-LGSRLIDIYLAHGEVDNAIKLFDDI 71
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ + SF WN +I + L L+S M ++ + TF VL+AC+ +
Sbjct: 72 PS-SNVSF-WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQ 129
Query: 129 -GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+ +H II GF S V L+D+Y+K G D VF+ + ++D VSW MI+
Sbjct: 130 VTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLS 189
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q + +EA++LF + + ++ SV SA ++ + +HG+ + +
Sbjct: 190 QNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETF 249
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N++V +Y+R GN+ A +F M +RD IS+NS+++G Q G + AL LF++MQ
Sbjct: 250 VCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC 309
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
KP+ VT L+SAC +G+ G++ H Y+I M D + +++D+Y KC D++TA
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
F + NV WNV++ YG G+ ++ F QM EG+ P+ T+ SIL C+
Sbjct: 370 EYF--LTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTS 427
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WG 486
G +D G + + K + V + ++DM + G L A ++++ L D V W
Sbjct: 428 LGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQR--LREEDVVSWT 485
Query: 487 ALLLACRIHGEIA-ANYLFQLEPEHTG 512
A++ H A A LFQ E E+ G
Sbjct: 486 AMIAGYTQHDLFAEALKLFQ-EMENQG 511
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 140/464 (30%), Positives = 235/464 (50%), Gaps = 6/464 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
QIH+ + G + L + +I Y+ G + A+ +F + S S W MI
Sbjct: 132 EQIHAKIIHHGFGSSPL-VCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS--WVAMISGL 188
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ NG E + L+ M +S + Y F VL AC L G+ +HG I++ G S++
Sbjct: 189 SQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSET 248
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V ALV +Y++ G ++F +M RD +S+ +I+ Q + AL LF+K Q +
Sbjct: 249 FVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLD 308
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ D VT+ S+ SA +G K + +H Y I DL I+ S++ +Y +C ++E A
Sbjct: 309 CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETA 368
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
F E +++ WN ML Y Q G SE+ +F +MQ PN T ++ CT L
Sbjct: 369 HEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSL 428
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G+ LG + H +I S + + + + ++DMYAK G+LDTA + + E +V SW
Sbjct: 429 GALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR--EEDVVSWTA 486
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+IAGY H +AL+ F +M +G++ D+I F+S +SAC+ +++G++ A
Sbjct: 487 MIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISG 546
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++ +V + R G +A+ +++ N S W AL+
Sbjct: 547 YSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNIS-WNALI 589
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 219/422 (51%), Gaps = 7/422 (1%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M GI +N T+ ++ + C ++ +L+ K +H I ++GF + + + L+D+Y G+
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
D+ K+FD++ ++ W +I+ + + L LF E + D T SV A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 221 V-GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
G + +H I + F + N ++ +Y++ G+V+ A+LVF+ + +D +S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
W +M++G QNG+ EA+LLF +M S P P ++SACT + +LG + HG+I+
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ + + NA++ +Y++ G+L AE +F+ +H +R S+N LI+G G +A
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDR--ISYNSLISGLAQRGFSDRA 298
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
L+ F +M + +KPD +T S+LSAC+ G +G++ + + K+ + ++ ++D+
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSN 519
+ + A + N +W +L+A G ++ +Y L+ + G LM N
Sbjct: 359 YVKCFDIETAHEYFLTTE-TENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG---LMPN 414
Query: 520 IY 521
Y
Sbjct: 415 QY 416
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 264/662 (39%), Positives = 393/662 (59%), Gaps = 13/662 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H + G N + +I Y + A+ LF+ + + S WN+MI Y
Sbjct: 271 RQVHGLICKLGF-NSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVIS--WNSMISGY 327
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS-D 144
NG +E++ M G+ + T V ACA+ +L GKV+H I+ L +
Sbjct: 328 VKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDRE 387
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
L+DMY+KCG + +VF+ M + +VSWT MIT Y + + A+ LF + +
Sbjct: 388 VRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKS 447
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G++ D + S+ +A G++ + VH Y N + + N++ MYA+CG+++
Sbjct: 448 RGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKD 507
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A VF M+K+D+ISWN+M+ GY +N +EAL LF EMQ + KP+ T ++ AC
Sbjct: 508 AHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR-ESKPDGTTVACILPACAS 566
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L + GR+ HGY + + D + NAV+DMY KCG L A ++F D+ P+ +++ SW
Sbjct: 567 LAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLF-DMIPN-KDLVSWT 624
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
V+IAGYGMHG+G +A+ F+QM G++PD ++F SIL ACSH+GL+DEG K F M K
Sbjct: 625 VMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKE 684
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
++P ++HYACMVD+L R G L +A IK MP+ P+ ++WGALL CRIH E
Sbjct: 685 CQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEK 744
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
A +F+LEPE+TGY+VL++NIYA + KW EV KLR+ + +GLKK S IE I
Sbjct: 745 VAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKIN 804
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D P K++ ++ + ++K GY P + AL + ++ ++E L HSEKLA+
Sbjct: 805 IFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAM 864
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AFG++NL P ++VTKNLRVC DCH +F+S R+II+RD++RFHHF+ G+CSC
Sbjct: 865 AFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRG 924
Query: 679 YW 680
YW
Sbjct: 925 YW 926
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 286/536 (53%), Gaps = 39/536 (7%)
Query: 10 GFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
G Y +L+ C S+R ++ S + +SG++ + LG K++ Y G+ R +F+
Sbjct: 151 GAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGI-LGVKLVFMYVKCGDLKEGRMVFD 209
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ K FLWN MI Y+ +G+ E++ L+ M GI NSYTF +LK A+ + +
Sbjct: 210 KLSESKI--FLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARV 267
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMY-----AKCGQTDDGCKVFDEMSVRDLVSWTV 181
EG+ VHG I + GF S + V +L+ Y +C Q K+FDE++ RD++SW
Sbjct: 268 EEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQ-----KLFDELTDRDVISWNS 322
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
MI+ Y + + + +F K G+ D T+V+V A +G +L + +H Y+I A
Sbjct: 323 MISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAA 382
Query: 242 FLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
L+ ++ N+++ MY++CG++ A VF+ M+++ ++SW SM+TGY++ G + A+ LF
Sbjct: 383 TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLF 442
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
DEM++ P+ +++AC G+ + G+ H YI +N++ ++ + NA+ DMYAKC
Sbjct: 443 DEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKC 502
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G + A ++F+ H +++V SWN +I GY + +AL F++M E KPD T
Sbjct: 503 GSMKDAHDVFS--HMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVAC 559
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMP 477
IL AC+ +D+GR+ + + +VDM + G L A FDMI
Sbjct: 560 ILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMI---- 615
Query: 478 LPPNDSV-WGALLLACRIH--GEIAANYLFQL-----EPEHTGYFVLMSNIYAASN 525
P D V W ++ +H G A N Q+ EP+ + +S +YA S+
Sbjct: 616 -PNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSF---ISILYACSH 667
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 193/396 (48%), Gaps = 5/396 (1%)
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I + G +EL + + S +Y +L+ CA I +G+ V I +G
Sbjct: 124 IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCS--ILQLCAERKSIRDGRRVRSIIESSGV 181
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+ D + LV MY KCG +G VFD++S + W +MI+ Y + E++ LF++
Sbjct: 182 MIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQ 241
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G+ +S T S+ + V + + VHG F + NS+++ Y
Sbjct: 242 MLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRK 301
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
V A+ +FD + RD+ISWNSM++GY++NG + +F +M + T + + A
Sbjct: 302 VRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVA 361
Query: 322 CTYLGSRQLGRKFHGYIIN-SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
C +G+ LG+ H Y I + + + N ++DMY+KCGDL++A +F + E+ V
Sbjct: 362 CANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERM--DEKTV 419
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
SW +I GY G A++ F +M GV PD TSIL+AC+ G + G+
Sbjct: 420 VSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDY 479
Query: 441 MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ + +++ + DM + G + +A D+ M
Sbjct: 480 IRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/656 (38%), Positives = 398/656 (60%), Gaps = 18/656 (2%)
Query: 40 QALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYS 99
+AL ++ + E +LFN + DK+ F WN++I A +G E L +S
Sbjct: 7 KALFCSVSRLLHTERHTERQNLTTLFNR-YVDKTDVFSWNSVIADLARSGDSAEALLAFS 65
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
+MR+ + +FP +KAC+S I GK H G+ SD +V +AL+ MY+ CG
Sbjct: 66 SMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG 125
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF------QKTQQEGLLSDSVT 213
+ +D KVFDE+ R++VSWT MI Y+ +A+ LF + + + DS+
Sbjct: 126 KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMG 185
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG--NVEKARLVFDM 271
+VSV SA ++ +++H + I F + + N+++ YA+ G V AR +FD
Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQ 245
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQL 330
+ +D +S+NS+++ Y Q+G ++EA +F + +N N +T ++ A ++ G+ ++
Sbjct: 246 IVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI 305
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G+ H +I ++ D + +++DMY KCG ++TA F+ + +NV SW +IAGY
Sbjct: 306 GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM--KNKNVRSWTAMIAGY 363
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPE 449
GMHGH KALE F M++ GV+P++ITF S+L+ACSHAGL EG + F M + V+P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLF 504
++HY CMVD+LGRAG L +A+D+I++M + P+ +W +LL ACRIH EI+ LF
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
+L+ + GY++L+S+IYA + +W++V ++R MKN+GL KP FS++E ++ F D
Sbjct: 484 ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
+P +++Y+ + + ++ AGY+ + S HDV++E++E L HSEKLA+AFGIMN
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMN 603
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P + V V KNLRVC+DCH+ + IS I R+ +VRDA RFHHF+ G CSC DYW
Sbjct: 604 TVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/660 (38%), Positives = 385/660 (58%), Gaps = 15/660 (2%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
IH G ++ L LG+ I+ Y + AR +F+ + + LWNTMI Y
Sbjct: 141 IHGQAIVDGCDSELL-LGSNIVKMYFKFWRVEDARKVFDRMPEKDT--ILWNTMISGYRK 197
Query: 88 NGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
N VE+++++ + S ++ T +L A A + G +H +TG S Y
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V + +Y+KCG+ +F E D+V++ MI Y + E +L LF++ G
Sbjct: 258 VLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
S T+VS+ G L + A+HGY++ + FL + ++ +Y++ +E AR
Sbjct: 318 AKLKSSTLVSLVPVSGHL---MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESAR 374
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
+FD ++ L SWN+M++GY QNG +A+ LF EMQNS+ PNPVT ++SAC LG
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLG 434
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ LG+ H + +++ + + A++ MYAKCG + A +F D P ++N +WN +
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF-DFMP-KKNEVTWNTM 492
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLS 445
I+GYG+HGHG++AL FS+ML G+ P +TF +L ACSHAGL+ EG + F M +
Sbjct: 493 ISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAA 500
+P VKHYAC+VD+LGRAG L A I+ MP+ P SVW LL ACRIH +
Sbjct: 553 FEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVS 612
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
LF+L+P++ GY VL+SNI++A + + +R+ K + L K +++IE G+ F
Sbjct: 613 EKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVF 672
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
+ D+ +P K +++K+E + +++ AGY P+ ALHDVE+E+RE M+ HSE+LA+AF
Sbjct: 673 TSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAF 732
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
G++ P +++ KNLRVC DCH+A + IS I R I+VRDANRFHHF+ G CSC DYW
Sbjct: 733 GLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 234/492 (47%), Gaps = 12/492 (2%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
S F D L K ++ L Q H+ + G N + L K+ + + G AR +F
Sbjct: 19 SKNNFLD-LFKRSTSISHLAQTHAQIVLHGFRND-ISLLTKLTQRLSDLGAIYYARDIFL 76
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSL 125
S+ + FL+N ++R ++ N +L +++ +R+S + NS T+ F + A +
Sbjct: 77 SVQ--RPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRD 134
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
G V+HG I G S+ + + +V MY K + +D KVFD M +D + W MI+
Sbjct: 135 DRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISG 194
Query: 186 YEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Y + E E++ +F+ E D+ T++ + AV +L ++ +H A
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ +++Y++CG ++ A +F + D++++N+M+ GY NG+ +L LF E+
Sbjct: 255 HDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
S K T LVS G L HGY + SN ++ A+ +Y+K +++
Sbjct: 315 LSGAKLKSST---LVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIE 371
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
+A +F++ E+++ SWN +I+GY +G A+ F +M P+ +T T ILSA
Sbjct: 372 SARKLFDE--SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSA 429
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
C+ G + G+ + + + ++ M + G + EA + MP N+
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVT 488
Query: 485 WGALLLACRIHG 496
W ++ +HG
Sbjct: 489 WNTMISGYGLHG 500
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/662 (38%), Positives = 388/662 (58%), Gaps = 12/662 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++IH GL N + +G ++ G+ ++A+ F I + ++N +I A
Sbjct: 249 KRIHKLTVEEGL-NSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDV--VVYNALIAAL 305
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A +GH VE E Y MR G++ N T+ +L AC+++ + GK++H I G SD
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ AL+ MYA+CG ++F M RDL+SW +I Y + E EA+ L+++ Q E
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSE 425
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ VT + + SA + +H + + + + N+++ MY RCG++ +A
Sbjct: 426 GVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA 485
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+ VF+ + RD+ISWNSM+ G+ Q+G A LF EMQN + +P+ +T ++S C
Sbjct: 486 QNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNP 545
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ +LG++ HG I S +++D L NA+++MY +CG L A N+F+ + R+V SW
Sbjct: 546 EALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ--HRDVMSWTA 603
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVK-PDHITFTSILSACSHAGLIDEGRKCFADM-TK 443
+I G G KA+E F QM EG + PD TFTSILSAC+HAGL+ EG + F+ M ++
Sbjct: 604 MIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESE 663
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI----- 498
V P ++HY C+V +LGRA EA +I QMP PP+ +VW LL ACRIHG I
Sbjct: 664 YGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEH 723
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
AAN +L + ++L+SN+YAA+ +W +V K+R M+ +G++K S IE I
Sbjct: 724 AANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIH 783
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F ADR +P E+Y +++ ++VE++ AGY PD LHD+ +E L HSE+LA+
Sbjct: 784 EFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAI 843
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
A+G++ P +++ KNLR+C DCH+A +FIS + R+II RD+NRFH F+ G CSC D
Sbjct: 844 AYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCED 903
Query: 679 YW 680
YW
Sbjct: 904 YW 905
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 254/490 (51%), Gaps = 11/490 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L +C A L ++IHS + +G + + ++ Y G+ AR +F I
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGY-QRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S+ NTM+ YA + E L L+ M GIS + T+ +L A + S++ E
Sbjct: 190 SPRDVVSY--NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE 247
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H + G SD V ALV M +CG D + F ++ RD+V + +I A Q
Sbjct: 248 GKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQ 307
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EA + + + +G+ + T +S+ +A + + +H + + D+ I
Sbjct: 308 HGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQI 367
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
N++++MYARCG++ KAR +F M KRDLISWN+++ GY + EA+ L+ +MQ+
Sbjct: 368 GNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGV 427
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP VT L L+SAC + G+ H I+ S +K + L NA+M+MY +CG L A+N
Sbjct: 428 KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQN 487
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F R+V SWN +IAG+ HG A + F +M E ++PD+ITF S+LS C +
Sbjct: 488 VFEGTQA--RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNP 545
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
++ G++ +T+ ++ +V +++M R G L +A ++ L D + W A
Sbjct: 546 EALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS--LQHRDVMSWTA 603
Query: 488 LLLACRIHGE 497
++ C GE
Sbjct: 604 MIGGCADQGE 613
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 154/559 (27%), Positives = 263/559 (47%), Gaps = 43/559 (7%)
Query: 12 YDQLLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL++C L ++IH+ + +G + + L +I Y A +F +
Sbjct: 30 YVALLQNCTRKRLLPEAKRIHAQMVEAG-VGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WN++I YA G + +L+ M+ +G N T+ +L AC S + +
Sbjct: 89 PRRDVIS--WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN 146
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H II+ G+ D VQ +L+ MY KCG +VF +S RD+VS+ M+ Y Q
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+E L LF + EG+ D VT +++ A + + + +H + D+ +
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++V M RCG+V+ A+ F + RD++ +N+++ Q+G EA + M++
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
N T L +++AC+ + + G+ H +I D + NA++ MYA+CGDL A
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F + +R++ SWN +IAGY +A+ + QM EGVKP +TF +LSAC+++
Sbjct: 387 LFYTM--PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
+G+ D+ + +K +++M R G L EA ++ + D + W +
Sbjct: 445 SAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT--QARDVISWNS 502
Query: 488 LLLACRIHGEIAANY-LFQ------LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
++ HG Y LFQ LEP++ + ++S
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS---------------------- 540
Query: 541 GLKKPAAFSVIEYGKDIQG 559
G K P A +E GK I G
Sbjct: 541 GCKNPEA---LELGKQIHG 556
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 205/392 (52%), Gaps = 3/392 (0%)
Query: 87 NNGHCVETLE-LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
N HC E + +T + ++ T+ +L+ C L+ E K +H ++ G D
Sbjct: 3 NERHCGPDREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDI 62
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ L++MY KC D +VF EM RD++SW +I+ Y Q ++A LF++ Q
Sbjct: 63 FLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNA 122
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G + + +T +S+ +A ++ + +H I + D +QNS+++MY +CG++ +A
Sbjct: 123 GFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRA 182
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VF + RD++S+N+ML Y Q E L LF +M + P+ VT + L+ A T
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G++ H + + D + A++ M +CGD+D+A+ F I ++R+V +N
Sbjct: 243 SMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGI--ADRDVVVYNA 300
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
LIA HGH +A E + +M +GV + T+ SIL+ACS + ++ G+ + +++
Sbjct: 301 LIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+V+ ++ M R G L +A ++ MP
Sbjct: 361 HSSDVQIGNALISMYARCGDLPKARELFYTMP 392
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/660 (38%), Positives = 394/660 (59%), Gaps = 45/660 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A S+F +I +WNTM R +A N V L+LY M G+ NSY+FPF+LK+C
Sbjct: 18 AISIFETIQEPNL--LIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSC 75
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------- 169
A + ++EG+ +HG +++ G+ D YV +L+ MYA+ G+ +D KVFD
Sbjct: 76 AKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYT 135
Query: 170 --------------------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
E+SV+D+VSW MI+ Y + +EAL L++ + +
Sbjct: 136 ALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKP 195
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D T+V+V SA Q G + + +H + + F ++ I N ++ +Y++CG VE A +F
Sbjct: 196 DESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLF 255
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+ K+D+ISWN+++ G+ EALLLF EM S PN VT L ++ AC +LG+
Sbjct: 256 QGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 315
Query: 330 LGRKFHGYIINSNMK---IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+GR H YI N +K ++L +++DMYAKCGD++ A+ +F+ + R++SSWN +
Sbjct: 316 IGRWIHVYI-NKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM--LTRSLSSWNAM 372
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LS 445
I G+ MHG A + FS+M + G+ PD ITF +LSACSH+G++D GR F M++
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYK 432
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAA 500
+ P+++HY CM+D+LG G EA +MI+ MP+ P+ +W +LL AC++H GE A
Sbjct: 433 ITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYA 492
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
L ++EPE+ G +VL+SNIYA + +W +V K+R + +KG+KK S IE + F
Sbjct: 493 QNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEF 552
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D+ +P +E+Y+ +E M + ++ G++PD S L ++E+E +E L +HSEKLA+AF
Sbjct: 553 IIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 612
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
G+++ P + + KNLRVC +CH A + IS IY+R+II RD R H + G SC+DYW
Sbjct: 613 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
L A ++F I E N+ WN + G+ ++ AL+ + M+ G+ P+ +F +L
Sbjct: 15 LSYAISIFETIQ--EPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLL 72
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
+C+ + + EG++ + KL ++ ++ M + G L +A
Sbjct: 73 KSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDA 119
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/703 (36%), Positives = 416/703 (59%), Gaps = 43/703 (6%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP-NTARSLFNSIHNDKSY 74
L S L L+Q+H+ + S L +++ L K++I + A S+FN I K
Sbjct: 30 LSSATSLTHLKQVHAQILRSKL-DRSTSLLVKLVISSCALSSSLDYALSVFNLI--PKPE 86
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+ L N +R + + +TL +Y MR G++ + ++FP +LKA + ++EG +HG
Sbjct: 87 THLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHG 146
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+ GF SD +VQ LV MYA CG+ + +FD+M RD+V+W++MI Y Q+ +
Sbjct: 147 LAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFND 206
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL+LF++ + + D + + +V SA G+ G++ + +H + + N + D +Q+++V
Sbjct: 207 ALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVT 266
Query: 255 MYARCGN-------------------------------VEKARLVFDMMEKRDLISWNSM 283
MYA CG+ +E AR VF+ M K+DL+ W++M
Sbjct: 267 MYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAM 326
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
++GY ++ EAL LF+EMQ+ KP+ VT L +++AC +LG+ + H ++ +
Sbjct: 327 ISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGF 386
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ NA+++MYAKCG L+ A +F+ + +NV SW +I+ + MHG AL FF
Sbjct: 387 GGALPINNALIEMYAKCGSLERARRIFDKM--PRKNVISWTCMISAFAMHGDAGSALRFF 444
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGR 462
QM +E ++P+ ITF +L ACSHAGL++EGRK F M + ++ P+ HY CMVD+ GR
Sbjct: 445 HQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGR 504
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLM 517
A L EA ++++ MPL PN +WG+L+ ACR+HGEI AA L +L+P+H G V +
Sbjct: 505 ANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFL 564
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SNIYA + +W +VG++R+ MK+KG+ K S E +I F ADR + + E+Y+K+
Sbjct: 565 SNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKL 624
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
+ ++K+ GY P+ L D+E+E+++ ++ +HSEKLA+ +G+M + +++ KNL
Sbjct: 625 YEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNL 684
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
RVC DCH+ + S +Y R+I+VRD RFHH++ G CSC DYW
Sbjct: 685 RVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/665 (37%), Positives = 394/665 (59%), Gaps = 11/665 (1%)
Query: 25 LRQIHSSLTTSG-LINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
L Q+H++L SG L A + + + A SLF + +N ++R
Sbjct: 32 LPQLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMR 91
Query: 84 AYANNGHCVETLELYSTMRR--SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
A+ + GH + L L+ M S ++ +T LK+C+ + G+ V ++ G
Sbjct: 92 AFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGL 151
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
++D +V ++L+ MYA CG VFD +V W ++ AY + E + +F+
Sbjct: 152 VADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKG 211
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G+ D VT+VSV +A G++GD + V G+ + + +++ MYA+CG
Sbjct: 212 MLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGE 271
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+ KAR +FD M+ RD+++W++M++GY Q Q EAL LF EMQ + +PN VT + ++SA
Sbjct: 272 IGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSA 331
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C LG+ + G+ H Y+ + + L A++D YAKCG +D A F + +N
Sbjct: 332 CAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM--PVKNSW 389
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
+W LI G +G GR+ALE FS M E G++P +TF +L ACSH+ L++EGR+ F M
Sbjct: 390 TWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSM 449
Query: 442 TK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
+ +KP V+HY CMVD+LGRAG + EA+ I+ MP+ PN +W ALL +C +H
Sbjct: 450 ARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGI 509
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
GE A + L P H+G +VL+SNIYA++ +W++ +R++MK++G++K S+IE
Sbjct: 510 GEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDG 569
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D +P +E+Y+KVE M IK+AGY+P+ + +VE+ ++E +++HSEK
Sbjct: 570 VVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEK 629
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AFG+M L P A ++++KNLRVC DCHSA + IS +Y R+I+VRD N FHHF+ GTCS
Sbjct: 630 LAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCS 689
Query: 676 CNDYW 680
CNDYW
Sbjct: 690 CNDYW 694
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 197/393 (50%), Gaps = 11/393 (2%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LKSC+ + +L R + + GL+ L + +I Y + G+ AR +F++ ++
Sbjct: 127 LKSCSRMCALDVGRGVQAYAVKRGLVADRFVL-SSLIHMYASCGDVAAARLVFDA--AEE 183
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
S +WN ++ AY NG +E +E++ M G++ + T V+ AC GK V
Sbjct: 184 SGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWV 243
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
G + G + + AL+DMYAKCG+ ++FD M RD+V+W+ MI+ Y QA++
Sbjct: 244 AGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQC 303
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EAL LF + Q + + VT+VSV SA LG + + VH Y + ++
Sbjct: 304 REALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTAL 363
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V YA+CG ++ A F+ M ++ +W +++ G NG+ EAL LF M+ + +P
Sbjct: 364 VDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTD 423
Query: 313 VTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++ AC++ + GR+ F + +K ++D+ + G +D A
Sbjct: 424 VTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIR 483
Query: 372 DIHPSERNVSSWNVLIAGYGMH---GHGRKALE 401
+ P E N W L++ +H G G +AL+
Sbjct: 484 TM-PIEPNAVIWRALLSSCAVHRNVGIGEEALK 515
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/661 (38%), Positives = 379/661 (57%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H+ + G A ++ Y G + A +F + + S WN +I
Sbjct: 222 RQVHAMVVRMGYEKDVFTANA-LVDMYVKMGRVDIASVIFEKMPDSDVVS--WNALISGC 278
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NGH +EL M+ SG+ N + +LKACA G+ +HG +I+ SD
Sbjct: 279 VLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDD 338
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
Y+ LVDMYAK DD KVFD MS RDL+ W +I+ + +EA +F ++E
Sbjct: 339 YIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKE 398
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
GL + T+ +V + L + VH A F+ D + N ++ Y +C + A
Sbjct: 399 GLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA 458
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ D+I+ SM+T Q A+ LF EM +P+P L++AC L
Sbjct: 459 IRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASL 518
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H ++I DA NA++ YAKCG ++ AE F+ + ER V SW+
Sbjct: 519 SAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL--PERGVVSWSA 576
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I G HGHG++ALE F +M++EG+ P+HIT TS+L AC+HAGL+DE ++ F M ++
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMF 636
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+ +HY+CM+D+LGRAG L +A +++ MP N SVWGALL A R+H G++A
Sbjct: 637 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLA 696
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A LF LEPE +G VL++N YA+S W EV K+R+ MK+ +KK A S +E +
Sbjct: 697 AEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHT 756
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F D+ +P KE+Y K++ + + AGY+P++ LHD++ ++E +L++HSE+LAVA
Sbjct: 757 FIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVA 816
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
F +++ P A ++V KNLR+C DCH AF+FIS I R+II+RD NRFHHF GTCSC DY
Sbjct: 817 FALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDY 876
Query: 680 W 680
W
Sbjct: 877 W 877
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 222/450 (49%), Gaps = 11/450 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+H++L SG + L +I Y+ P AR +F+ I + S W++++ AY+
Sbjct: 25 HLHANLLKSGFLAS---LRNHLISFYSKCRRPCCARRVFDEIPDPCHVS--WSSLVTAYS 79
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NNG ++ + MR G+ N + P VLK L G VH + TGF SD +
Sbjct: 80 NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL---GAQVHAMAMATGFGSDVF 136
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V ALV MY G DD +VFDE S R+ VSW +++AY + ++ +A+ +F +
Sbjct: 137 VANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ V +A ++ + VH + + +D+ N++V MY + G V+ A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIA 256
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
++F+ M D++SWN++++G + NG A+ L +M++S PN ++ AC
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGA 316
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G+ LGR+ HG++I +N D + ++DMYAK LD A +F+ + S R++ WN
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWM--SHRDLILWNA 374
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
LI+G G +A F + +EG+ + T ++L + + R+ A K+
Sbjct: 375 LISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIG 434
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
+ ++D + CL +A + ++
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDAIRVFEE 464
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 205/404 (50%), Gaps = 30/404 (7%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
MR +G S T A+ +L G +H +++++GFL+ ++ L+ Y+KC +
Sbjct: 1 MRSAGTISQQLT------RYAAAQALLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRR 52
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
+VFDE+ VSW+ ++TAY P A+ F + EG+ + + V
Sbjct: 53 PCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC 112
Query: 221 V--GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM-EKRDL 277
V QLG AQ VH A+ F D+ + N++VAMY G ++ AR VFD +R+
Sbjct: 113 VPDAQLG----AQ-VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNA 167
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL--GRKFH 335
+SWN +++ Y++N Q +A+ +F EM S +P +V+ACT GSR + GR+ H
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACT--GSRNIDAGRQVH 225
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
++ + D NA++DMY K G +D A +F + S+ V SWN LI+G ++GH
Sbjct: 226 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD--VVSWNALISGCVLNGH 283
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
+A+E QM G+ P+ +SIL AC+ AG D GR+ M K + +
Sbjct: 284 DHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG 343
Query: 456 MVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHG 496
+VDM + L +A FD + L +W AL+ C HG
Sbjct: 344 LVDMYAKNHFLDDAMKVFDWMSHRDLI----LWNALISGCS-HG 382
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/506 (25%), Positives = 231/506 (45%), Gaps = 16/506 (3%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ +G + + ++ Y +G + AR +F+ ++++ + WN ++ AY
Sbjct: 121 QVHAMAMATGF-GSDVFVANALVAMYGGFGFMDDARRVFDEAGSERN-AVSWNGLMSAYV 178
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
N C + ++++ M SGI + F V+ AC + I G+ VH ++R G+ D +
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 238
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
ALVDMY K G+ D +F++M D+VSW +I+ A+ L + + G
Sbjct: 239 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 298
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L+ + + S+ A G + +HG+ I D I +V MYA+ ++ A
Sbjct: 299 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM 358
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VFD M RDLI WN++++G G+ EA +F ++ N T ++ + L
Sbjct: 359 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLE 418
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ R+ H DA + N ++D Y KC L A +F + S ++ + +
Sbjct: 419 AASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEEC--SSGDIIAVTSM 476
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I HG A++ F +ML +G++PD +S+L+AC+ ++G++ A + K
Sbjct: 477 ITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 536
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLF 504
+ +V + G + +A +P S W A++ LA HG+ A
Sbjct: 537 MSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGHGKRALELFG 595
Query: 505 QL-----EPEHTGYFVLMSNIYAASN 525
++ P H + M+++ A N
Sbjct: 596 RMVDEGINPNH----ITMTSVLCACN 617
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 168/359 (46%), Gaps = 33/359 (9%)
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+ G +S +T + A A+ L +H + + FL L +N +++ Y++C
Sbjct: 2 RSAGTISQQLTRYAAAQAL------LPGAHLHANLLKSGFLASL--RNHLISFYSKCRRP 53
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
AR VFD + +SW+S++T Y NG A+ F M+ N AL +V C
Sbjct: 54 CCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEF-ALPVVLKC 112
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ QLG + H + + D + NA++ MY G +D A +F++ SERN S
Sbjct: 113 --VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEA-GSERNAVS 169
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
WN L++ Y + A++ F +M+ G++P F+ +++AC+ + ID GR+ A +
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVV 229
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIAAN 501
++ + +V +VDM + G + A + ++M P +D V W AL+ C ++G
Sbjct: 230 RMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM--PDSDVVSWNALISGCVLNGHDHRA 287
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
L+ + +G L+ N++ M + LK A + G+ I GF
Sbjct: 288 IELLLQMKSSG---LVPNVF---------------MLSSILKACAGAGAFDLGRQIHGF 328
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/661 (38%), Positives = 379/661 (57%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H+ + G A ++ Y G + A +F + + S WN +I
Sbjct: 129 RQVHAMVVRMGYEKDVFTANA-LVDMYVKMGRVDIASVIFEKMPDSDVVS--WNALISGC 185
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NGH +EL M+ SG+ N + +LKACA G+ +HG +I+ SD
Sbjct: 186 VLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDD 245
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
Y+ LVDMYAK DD KVFD MS RDL+ W +I+ + +EA +F ++E
Sbjct: 246 YIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKE 305
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
GL + T+ +V + L + VH A F+ D + N ++ Y +C + A
Sbjct: 306 GLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA 365
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ D+I+ SM+T Q A+ LF EM +P+P L++AC L
Sbjct: 366 IRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASL 425
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H ++I DA NA++ YAKCG ++ AE F+ + ER V SW+
Sbjct: 426 SAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL--PERGVVSWSA 483
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I G HGHG++ALE F +M++EG+ P+HIT TS+L AC+HAGL+DE ++ F M ++
Sbjct: 484 MIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMF 543
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+ +HY+CM+D+LGRAG L +A +++ MP N SVWGALL A R+H G++A
Sbjct: 544 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLA 603
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A LF LEPE +G VL++N YA+S W EV K+R+ MK+ +KK A S +E +
Sbjct: 604 AEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHT 663
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F D+ +P KE+Y K++ + + AGY+P++ LHD++ ++E +L++HSE+LAVA
Sbjct: 664 FIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVA 723
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
F +++ P A ++V KNLR+C DCH AF+FIS I R+II+RD NRFHHF GTCSC DY
Sbjct: 724 FALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDY 783
Query: 680 W 680
W
Sbjct: 784 W 784
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/506 (25%), Positives = 231/506 (45%), Gaps = 16/506 (3%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ +G + + ++ Y +G + AR +F+ ++++ + WN ++ AY
Sbjct: 28 QVHAMAMATGF-GSDVFVANALVAMYGGFGFMDDARRVFDEAGSERN-AVSWNGLMSAYV 85
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
N C + ++++ M SGI + F V+ AC + I G+ VH ++R G+ D +
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 145
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
ALVDMY K G+ D +F++M D+VSW +I+ A+ L + + G
Sbjct: 146 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 205
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L+ + + S+ A G + +HG+ I D I +V MYA+ ++ A
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM 265
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VFD M RDLI WN++++G G+ EA +F ++ N T ++ + L
Sbjct: 266 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLE 325
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ R+ H DA + N ++D Y KC L A +F + S ++ + +
Sbjct: 326 AASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEEC--SSGDIIAVTSM 383
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I HG A++ F +ML +G++PD +S+L+AC+ ++G++ A + K
Sbjct: 384 ITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 443
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLF 504
+ +V + G + +A +P S W A++ LA HG+ A
Sbjct: 444 MSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGHGKRALELFG 502
Query: 505 QL-----EPEHTGYFVLMSNIYAASN 525
++ P H + M+++ A N
Sbjct: 503 RMVDEGINPNH----ITMTSVLCACN 524
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 186/376 (49%), Gaps = 6/376 (1%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
MR G+ N + P VLK L G VH + TGF SD +V ALV MY G
Sbjct: 1 MRAEGVCCNEFALPVVLKCVPDAQL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 161 TDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
DD +VFDE S R+ VSW +++AY + ++ +A+ +F + G+ V +
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
A ++ + VH + + +D+ N++V MY + G V+ A ++F+ M D++S
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN++++G + NG A+ L +M++S PN ++ AC G+ LGR+ HG++I
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+N D + ++DMYAK LD A +F+ + S R++ WN LI+G G +A
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWM--SHRDLILWNALISGCSHGGRHDEA 295
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
F + +EG+ + T ++L + + R+ A K+ + ++D
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355
Query: 460 LGRAGCLYEAFDMIKQ 475
+ CL +A + ++
Sbjct: 356 YWKCSCLSDAIRVFEE 371
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/678 (38%), Positives = 389/678 (57%), Gaps = 49/678 (7%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
Q+L + + +LR +HS + L + LG K++ Y + + +AR +F+ I +
Sbjct: 47 QVLDTYPDIRTLRTVHSRIILEDLRCNS-SLGVKLMRAYASLKDVASARKVFDEI--PER 103
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ N MIR+Y NNG E ++++ TM + + YTFP VLKAC+ + I+ G+ +H
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIH 163
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G + G S +V LV MY KCG + V DEMS RD+VSW ++ Y Q ++ +
Sbjct: 164 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFD 223
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+AL + ++ + + D+ T+ S+ AV N E
Sbjct: 224 DALEVCREMESVKISHDAGTMASLLPAVS-----------------NTTTE--------- 257
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
NV + +F M K+ L+SWN M+ Y++N EA+ L+ M+ +P+ V
Sbjct: 258 -------NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
+ ++ AC + LG+K HGYI + + L NA++DMYAKCG L+ A ++F ++
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
R+V SW +I+ YG G G A+ FS++ + G+ PD I F + L+ACSHAGL++E
Sbjct: 371 --KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 434 GRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
GR CF MT + P ++H ACMVD+LGRAG + EA+ I+ M + PN+ VWGALL AC
Sbjct: 429 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Query: 493 RIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+H G +AA+ LFQL PE +GY+VL+SNIYA + +W EV +R MK+KGLKK
Sbjct: 489 RVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPG 548
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S +E + I F DR +P E+Y++++ + ++K GY+PD ALHDVE+ED+E
Sbjct: 549 ASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKET 608
Query: 608 MLNYHSEKLAVAFGIMNLTPEA-----VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
L HSEKLA+ F +MN E +++TKNLR+C DCH A + IS I R+II+RD
Sbjct: 609 HLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRD 668
Query: 663 ANRFHHFEGGTCSCNDYW 680
NRFH F G CSC DYW
Sbjct: 669 TNRFHVFRFGVCSCGDYW 686
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 17/237 (7%)
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI--- 252
L L QK+ QE T+ + + D+ + VH I LEDL +S+
Sbjct: 31 LELDQKSPQE-------TVFLLGQVLDTYPDIRTLRTVHSRII----LEDLRCNSSLGVK 79
Query: 253 -VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ YA +V AR VFD + +R++I N M+ Y+ NG E + +F M + +P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T ++ AC+ G+ +GRK HG + + N ++ MY KCG L A + +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
++ S R+V SWN L+ GY + ALE +M + D T S+L A S+
Sbjct: 200 EM--SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 268/735 (36%), Positives = 394/735 (53%), Gaps = 81/735 (11%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L+ RQ H+ + +GL N HL K++ Y A + + + +SF +T+
Sbjct: 29 LSQTRQAHAHILKTGLFNDT-HLATKLLSHYANNMCFADATLVLDLVPEPNVFSF--STL 85
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I A++ L +S M G+ ++ P +KACA S + + VHG +GF
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY--------------- 186
SDS+VQ++LV MY KC Q D +VFD M D+VSW+ ++ AY
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205
Query: 187 --EQAEKP------------------EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+ +P EA+++F G D TI SV AVG L D
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL--------- 277
++ +HGY I + D C+ ++++ MY +C + VFD M+ D+
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 278 --------------------------ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+SW SM+ QNG+ EAL LF EMQ + KPN
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPN 385
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT L+ AC + + G+ H + + + D + +A++DMYAKCG + + F+
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
I +N+ WN +IAGY MHG ++A+E F M G KPD I+FT +LSACS +GL
Sbjct: 446 GI--PTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLT 503
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F M+ K ++ V+HYACMV +L RAG L +A+ MI++MP+ P+ VWGALL
Sbjct: 504 EEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
+CR+H GE+AA LF+LEP + G ++L+SNIYA+ W EV ++R+ MKNKGL+K
Sbjct: 564 SCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + D+ +P ++ +K++ +++E+K GY P+++ L DVE++D+
Sbjct: 624 PGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDK 683
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +L HSEKLAV FG++N P +QV KNLR+C DCH +FIS RR+I VRD NR
Sbjct: 684 EQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNR 743
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSC DYW
Sbjct: 744 FHHFKEGACSCGDYW 758
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 252/659 (38%), Positives = 388/659 (58%), Gaps = 43/659 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A S+F +I +WNTMIR +A + V +L LY M G+ NSYTFPF+LK+C
Sbjct: 17 ATSVFETIQEPNQ--LIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSC 74
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------- 169
A + EG+ +HG +++ GF D YV +L+ MY + + +D KVFD
Sbjct: 75 AKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYT 134
Query: 170 --------------------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
E+ V+D+VSW MI+ Y + +EAL LF++ + +
Sbjct: 135 ALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRP 194
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D T V+V SA G + + VH + + F +L I N+++ +Y++CG VE A +F
Sbjct: 195 DESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLF 254
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+ +D+ISWN+++ GY EALLLF EM S PN VT L ++ AC +LG+
Sbjct: 255 QGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAID 314
Query: 330 LGRKFHGYIINSNMKID--ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
+GR H YI + ++LR +++DMYAKCGD++ A +FN + +++SSWN +I
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM--LHKSLSSWNAMI 372
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSV 446
G+ MHG + + FS+M + G++PD ITF +LSACSH+G++D GR F MT+ +
Sbjct: 373 FGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKM 432
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----AN 501
P+++HY CM+D+LG +G EA +MI M + P+ +W +LL AC++HG + A
Sbjct: 433 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQ 492
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
L ++EPE+ ++L+SNIYA++ +W +V ++R + K +KK S IE + F
Sbjct: 493 NLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFV 552
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
D+ +P +E+Y +E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG
Sbjct: 553 VGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 612
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ P + + KNLRVC +CH A + +S IY+R+I+ RD RFHHF G CSCNDYW
Sbjct: 613 LISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/691 (37%), Positives = 409/691 (59%), Gaps = 14/691 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M +LG + F + LLK+C+ L +L R IH+ GL + L++ ++ Y G
Sbjct: 98 MLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGL-SMDLYVSTALLHMYAKCG 156
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
A++LFNSI + WN MI A++ + +T+ + M+++G++ NS T +
Sbjct: 157 HLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSI 216
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L + + +GK +H IR F + +Q AL+DMYAKC K+F+ ++ ++
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND 276
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQ-QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
V W+ MI Y + +AL L+ GL T+ ++ A QL D+ + + +H
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ I + D + NS+++MYA+CG ++ A D M +D +S++++++G +QNG A +
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEK 396
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
ALL+F +MQ+S P T + L+ AC++L + Q G HGY + D ++ NA++D
Sbjct: 397 ALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIID 456
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY+KCG + + +F+ + R++ SWN +I GYG+HG +AL F ++ G+KPD
Sbjct: 457 MYSKCGKITISREIFDRMQ--NRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDD 514
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+T ++LSACSH+GL+ EG+ F+ M++ ++KP + HY CMVD+L RAG L EA+ I+
Sbjct: 515 VTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQ 574
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
+MP PN +WGALL ACR H GE + + L PE TG FVLMSNIY++ +W +
Sbjct: 575 RMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDD 634
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
+R ++ G KK S +E I F + +P + KK++ + V++K GY
Sbjct: 635 AAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGY 694
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
D S LHDVE+E++E +L YHSEK+A+AFGI+N +P + + VTKNLR+C DCHSA +F
Sbjct: 695 RADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKF 754
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I+ + R+I VRDA+RFHHF+ G C+C D+W
Sbjct: 755 ITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/480 (30%), Positives = 249/480 (51%), Gaps = 21/480 (4%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
+ + E AR +F+ I K LWN MIR YA +G +++ LY M + G++ ++
Sbjct: 51 HISRNEIQLARHVFDQI--PKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNF 108
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TFPF+LKAC+S + G+++H G D YV AL+ MYAKCG +F+ +
Sbjct: 109 TFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSI 168
Query: 172 SV--RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
S RD+V+W MI A+ + + + QQ G+ +S T+VS+ +GQ + +
Sbjct: 169 SHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQ 228
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
+A+H Y I N F +++ +Q +++ MYA+C + AR +F+ + K++ + W++M+ GY+
Sbjct: 229 GKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVL 288
Query: 290 NGQASEALLLFDEMQN-SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
+ S+AL L+D+M P P T ++ AC L + G+K H ++I S M +D T
Sbjct: 289 HDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTT 348
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ N+++ MYAKCG +D A +++ ++ S++ +I+G +G+ KAL F QM
Sbjct: 349 VGNSLISMYAKCGIMDNAVGFLDEM--IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQS 406
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY- 467
G+ P T ++L ACSH + G C + ++DM + G +
Sbjct: 407 SGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITI 466
Query: 468 --EAFDMIKQMPLPPNDSVWGALLLACRIHGE-IAANYLFQ------LEPEHTGYFVLMS 518
E FD ++ + W +++ IHG + A LFQ L+P+ ++S
Sbjct: 467 SREIFDRMQNRDIIS----WNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLS 522
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 249/588 (42%), Positives = 364/588 (61%), Gaps = 15/588 (2%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M R GI +++TFPF++KAC+ G +H D+++ G+ S ++ +L+ MY KC +
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
+ +VFDEM ++ VSW+ +I A Q ++ +E LF++ EG I++ +
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC 120
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
V + A V+ + N D +Q++ M+ARCG VE AR +FD + +DL++W
Sbjct: 121 VRSHEE---ADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
+ + Y++ EAL L +M P+ +T L ++ AC+ L S QL HG II
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IIT 236
Query: 341 SNMKIDATL--RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ + L A++D+Y KCG L A +F+ + ERN+ +W+ +I+GYGMHG GR+
Sbjct: 237 TGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQ--ERNIITWSAMISGYGMHGWGRE 294
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMV 457
AL F QM + VKPDHITF SILSACSH+GL+ EG +CF M + V P +HYACMV
Sbjct: 295 ALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMV 353
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTG 512
D+LGRAG L EA D I++MP+ PN +VWGALL ACRIH E+ A LF L+P + G
Sbjct: 354 DILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAG 413
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
+V++ NIY + K +E +R MKN+G+KK A +SVIE + F DR +P
Sbjct: 414 RYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDL 473
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+Y ++E + I+ GY PD++ LHDV++E +E ML HSEKLA+ FG++NL P +V++
Sbjct: 474 IYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIR 533
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ KNLRVC DCH+A +FIS + R+I+VRDA+RFHHF+ G CSC DYW
Sbjct: 534 IRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 110/238 (46%), Gaps = 18/238 (7%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF 115
G AR LF+ I + + W T I AY +E L L M GI ++ T
Sbjct: 157 GRVEVARKLFDGIMSKDLVT--WATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLG 214
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSY--VQAALVDMYAKCGQTDDGCKVFDEMSV 173
V++AC++ + +VHG II TGF + V+ AL+D+Y KCG KVFD M
Sbjct: 215 VIRACSTLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQE 273
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
R++++W+ MI+ Y EAL LF + + + D +T VS+ SA G V
Sbjct: 274 RNIITWSAMISGYGMHGWGREALNLFDQMKAS-VKPDHITFVSILSACSHSGLV-----A 327
Query: 234 HGYAICNAFLEDLCIQNS------IVAMYARCGNVEKARLVFDMMEKR-DLISWNSML 284
G+ N+ D + +V + R G +++A + M R + W ++L
Sbjct: 328 EGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALL 385
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++++C+ LAS + +H +TT NQ L + +I Y G AR +F+ +
Sbjct: 215 VIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQER 274
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ W+ MI Y +G E L L+ M+ S + + TF +L AC+ + L+ EG
Sbjct: 275 NIIT--WSAMISGYGMHGWGREALNLFDQMKAS-VKPDHITFVSILSACSHSGLVAEGWE 331
Query: 132 VHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA 185
+ R G A +VD+ + G+ D+ C + M VR + W ++ A
Sbjct: 332 CFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGA 387
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/680 (37%), Positives = 392/680 (57%), Gaps = 46/680 (6%)
Query: 43 HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
HL K I Y+ G+ AR LF+ I + W +I A +G +E ++ Y+ R
Sbjct: 12 HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPT--WTILISALTKHGRSLEAIQYYNDFR 69
Query: 103 -RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
++ + + V KACAS ++ K VH D IR GF SD + AL+DMY KC +
Sbjct: 70 HKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCS 129
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
+ VF+ M RD++SWT M + Y EAL F+K G +SVT+ S+ A
Sbjct: 130 EGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPAC 189
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L D+ + VHG+ + N ++ + +++V MYA C ++ +A+LVFD M +RD +SWN
Sbjct: 190 TDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWN 249
Query: 282 SMLTGY-----------------------------------IQNGQASEALLLFDEMQNS 306
++T Y +QNG+ +AL + MQNS
Sbjct: 250 VLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNS 309
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
KPN +T ++ ACT L S + G++ HGYI D T A++ MYAKCGDL+ +
Sbjct: 310 GFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELS 369
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F+ + ++R+ SWN +I MHG+G +AL F +M++ GV+P+ +TFT +LS CS
Sbjct: 370 RRVFSMM--TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCS 427
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+ L+DEG F M++ SV+P+ H++CMVD+L RAG L EA++ IK+MP+ P W
Sbjct: 428 HSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAW 487
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GALL CR++ G IAAN LF++E ++ G +VL+SNI ++ W E + R+ M+++
Sbjct: 488 GALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDR 547
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+ K S I+ + F D+ N E+Y+ ++ M ++++AGY+P+ L DV
Sbjct: 548 GVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDV 607
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+ E++E +L HSEKLAVAFG++NL E+ ++V KNLR+C DCH+A +F++ I KIIV
Sbjct: 608 DQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIV 667
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD+ RFHHF G CSC D+W
Sbjct: 668 RDSLRFHHFRDGLCSCQDFW 687
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/662 (37%), Positives = 383/662 (57%), Gaps = 15/662 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R IH G ++ L LG+ I+ Y + AR +F+ + + LWNTMI Y
Sbjct: 139 RVIHGQAVVDGCDSELL-LGSNIVKMYFKFWRVEDARKVFDRMPEKDT--ILWNTMISGY 195
Query: 86 ANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
N VE+++++ + S ++ T +L A A + G +H +TG S
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
YV + +Y+KCG+ G +F E D+V++ MI Y + E +L LF++
Sbjct: 256 DYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G S T+VS+ G L + A+HGY + + FL + ++ +Y++ +E
Sbjct: 316 SGARLRSSTLVSLVPVSGHL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
AR +FD ++ L SWN+M++GY QNG +A+ LF EMQ S+ PNPVT ++SAC
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 432
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
LG+ LG+ H + +++ + + A++ MYAKCG + A +F+ + +++N +WN
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM--TKKNEVTWN 490
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-K 443
+I+GYG+HG G++AL F +ML G+ P +TF +L ACSHAGL+ EG + F M +
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
+P VKHYACMVD+LGRAG L A I+ M + P SVW LL ACRIH
Sbjct: 551 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
+ LF+L+P++ GY VL+SNI++A + + +R+ K + L K +++IE G+
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F + D+ +P KE+Y+K+E + +++ AGY P+ ALHDVE+E+RE M+ HSE+LA+
Sbjct: 671 VFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 730
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AFG++ P +++ KNLRVC DCH+ + IS I R I+VRDANRFHHF+ G CSC D
Sbjct: 731 AFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD 790
Query: 679 YW 680
YW
Sbjct: 791 YW 792
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 236/491 (48%), Gaps = 17/491 (3%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y K ++ L Q H+ + G N + L K+ + + G AR +F S+
Sbjct: 23 YLDFFKRSTSISHLAQTHAQIILHGFRND-ISLLTKLTQRLSDLGAIYYARDIFLSVQ-- 79
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLILEGK 130
+ FL+N ++R ++ N +L +++ +R+S + NS T+ F + A + G+
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
V+HG + G S+ + + +V MY K + +D KVFD M +D + W MI+ Y + E
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199
Query: 191 KPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
E++ +F+ E D+ T++ + AV +L ++ +H A +
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL 259
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
+++Y++CG ++ +F K D++++N+M+ GY NG+ +L LF E+ S +
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
T LVS G L HGY + SN A++ A+ +Y+K ++++A +
Sbjct: 320 LRSST---LVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F++ E+++ SWN +I+GY +G A+ F +M + P+ +T T ILSAC+ G
Sbjct: 377 FDE--SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWG 486
+ G+ + + + ++ M + G + EA FD++ + N+ W
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK----KNEVTWN 490
Query: 487 ALLLACRIHGE 497
++ +HG+
Sbjct: 491 TMISGYGLHGQ 501
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 248/644 (38%), Positives = 384/644 (59%), Gaps = 12/644 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G+ +I +G+ A+ +F+ + N WN++I Y G +L+ M
Sbjct: 167 VGSSMISFLVKFGKIGEAQRVFDGMPNKDVVC--WNSIIGGYVQAGCFDVAFQLFFEMHG 224
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
SGI + T +++AC + GK +HG ++ G +D V + VDMY+K G +
Sbjct: 225 SGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIES 284
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
VF +M R+LVSW MI+ + E+ LF + + D TIVS+ Q
Sbjct: 285 ARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQ 344
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ + +HG AI +F +L + +IV +Y++CG++++A VF+ M+ R++I+W +M
Sbjct: 345 TASLATGKILHGCAI-RSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAM 403
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
L G QNG A +AL LF +MQ N VT + LV +C +LGS + GR HG++
Sbjct: 404 LVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGF 463
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS-ERNVSSWNVLIAGYGMHGHGRKALEF 402
D A++DMYAKCG ++ AE +F+ H S ++V WN +I GYGMHGHG +A+
Sbjct: 464 AFDIVNMTALVDMYAKCGKINLAERIFS--HGSISKDVVLWNSMITGYGMHGHGYQAVGI 521
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLG 461
+ +M+EEG+KP+ TF S+LSACSH+ L+++G F M + +++P KHYAC+VD+L
Sbjct: 522 YHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLS 581
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVL 516
RAG EA +I++MP P +V ALL CR H I ++ L L+ + G +++
Sbjct: 582 RAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIM 641
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
+SNIYA + +W +V +R M+N+GLKK +S++E G + F D +P W+E+Y
Sbjct: 642 LSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHF 701
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
+ES+ ++ +GY+PD SC L DV++E + ML HSE+LA+AFG++ +++++TKN
Sbjct: 702 LESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKN 761
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LRVC DCH+ ++IS I +R+IIVRDANRFHHF G CSC DYW
Sbjct: 762 LRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/531 (28%), Positives = 259/531 (48%), Gaps = 24/531 (4%)
Query: 6 PSTEGFYDQLLKSC-NFLASLRQ----------IHSSLTTSGLINQALHLGAKIIIKYTT 54
P +G ++QL NFL+ LR+ H+ + T+ L + K++ Y+
Sbjct: 18 PLKDGQFNQLPTIIHNFLSLLRESSKNLIWVKSTHAQIITNSLSTDQF-VATKLVKAYSD 76
Query: 55 YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
AR +F+ K L N M+ Y +G ETLEL+ MR + +S +
Sbjct: 77 LRSLEAARYVFDQFFQPKG--LLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCT 134
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
F LKACAS+ G + + G + +V ++++ K G+ + +VFD M +
Sbjct: 135 FALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNK 194
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
D+V W +I Y QA + A LF + G+ +T+ S+ A G +G++ + +H
Sbjct: 195 DVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMH 254
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
GY + D+ + S V MY++ G++E AR VF M R+L+SWN+M++G ++NG
Sbjct: 255 GYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVG 314
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
E+ LF + S + T + L+ C+ S G+ HG I S + + L A++
Sbjct: 315 ESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIV 373
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
D+Y+KCG L A +FN + +RNV +W ++ G +GH AL F+QM EEG+ +
Sbjct: 374 DLYSKCGSLKQATFVFNRM--KDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAAN 431
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+TF S++ +C+H G + GR + +L ++ + +VDM + G + A +
Sbjct: 432 SVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFS 491
Query: 475 QMPLPPNDSVWGALLLACRIHGE-IAANYLFQ------LEPEHTGYFVLMS 518
+ + +W +++ +HG A ++ L+P T + L+S
Sbjct: 492 HGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLS 542
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 257/686 (37%), Positives = 395/686 (57%), Gaps = 17/686 (2%)
Query: 5 GPSTEGFYDQLLKSCNF---LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTA 61
GP F LLK C LA+ R +H+ L GL +AL A + Y P A
Sbjct: 222 GPVLRTF-TSLLKLCAARADLATGRAVHAQLAARGLSPEALAATA-LANMYAKCRRPGDA 279
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKAC 120
R +F+ + + WN ++ YA NG + + M+ G ++ T VL AC
Sbjct: 280 RRVFDRMPARDRVA--WNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPAC 337
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A + + VH +R GF V A++D+Y KCG D KVFD M R+ VSW
Sbjct: 338 ADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWN 397
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI Y + EAL LF++ EG+ V++++ A G+LG + + + VH +
Sbjct: 398 AMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRI 457
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
++ + N+++ MY +C + A VFD + + +SWN+M+ G QNG + +A+ LF
Sbjct: 458 GLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLF 517
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
MQ + KP+ T + ++ A + R HGY I ++ D + A++DMYAKC
Sbjct: 518 SRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 577
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G + A ++FN +R+V +WN +I GYG HG G+ A+E F +M G P+ TF S
Sbjct: 578 GRVSIARSLFNSAR--DRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLS 635
Query: 421 ILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSACSHAGL+DEG++ F+ M + ++P ++HY MVD+LGRAG L+EA+ I++MP+
Sbjct: 636 VLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPME 695
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P SV+GA+L AC++H E +A +F+LEPE Y VL++NIYA ++ W++V ++R
Sbjct: 696 PGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVR 755
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
M+ KGL+K +S+++ +I F++ + K++Y ++ + EIK GY+PD
Sbjct: 756 TAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTD 815
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
++HDVED+ + +LN HSEKLA+A+G++ P +Q+ KNLRVC DCH+A + IS +
Sbjct: 816 -SIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVT 874
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R+II+RD RFHHF+ G CSC DYW
Sbjct: 875 GREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 193/385 (50%), Gaps = 4/385 (1%)
Query: 82 IRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
+RA A+ L ++ M SG TF +LK CA+ + + G+ VH + G
Sbjct: 196 LRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARG 255
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
++ AL +MYAKC + D +VFD M RD V+W ++ Y + E A+ +
Sbjct: 256 LSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVV 315
Query: 201 KTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ Q+E G D+VT+VSV A + + VH +A+ F E + + +I+ +Y +C
Sbjct: 316 RMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKC 375
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G V+ AR VFD M+ R+ +SWN+M+ GY +NG A+EAL LF M V+ L +
Sbjct: 376 GAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAAL 435
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC LG GR+ H ++ ++ + + NA++ MY KC D A +F+++ R
Sbjct: 436 HACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR- 494
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
SWN +I G +G A+ FS+M E VKPD T SI+ A + + R
Sbjct: 495 -VSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHG 553
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAG 464
+L + +V ++DM + G
Sbjct: 554 YSIRLHLDQDVYVLTALIDMYAKCG 578
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/686 (37%), Positives = 397/686 (57%), Gaps = 55/686 (8%)
Query: 11 FYDQLLKSCNFLA----------SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
F Q+L S LA +L+++H+ + +Q LG K++ Y GEP
Sbjct: 13 FIQQILTSFGLLAKALDQNPDIKTLKKLHTMIFYLN-SHQNPSLGIKLMRSYAACGEPGL 71
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
R +F+ + +D++ F +N MIR+Y NN + L ++ M G ++YT+P VLKAC
Sbjct: 72 TRKVFDEM-SDRNVVF-YNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKAC 129
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ + + G ++HGD+++ G + +V L+ MY KCG + +VFDEM +D+VSW
Sbjct: 130 SCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWN 189
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
M+ Y + ++AL + ++ + G D T+ S+ AV
Sbjct: 190 SMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS-------------- 235
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
NV +F +E+++LISWN M+ Y++N ++A+ L+
Sbjct: 236 -------------------ENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLY 276
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M+ +P+ +T ++ AC L + LGR+ H Y+ + + L N+++DMYA+C
Sbjct: 277 LQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARC 336
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G LD A+ +F+ + R+V+SW LI+ YGM G G A+ F++ML G PD I F +
Sbjct: 337 GCLDDAKRVFDRM--KFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVA 394
Query: 421 ILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
ILSACSH+GL+DEGR F MT + P ++HYAC+VD+LGRAG + EA+++IKQMP+
Sbjct: 395 ILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIE 454
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
PN+ VW LL +CR+ G +AA+ L QL PE +GY+VL+SNIYA + +W+EV ++R
Sbjct: 455 PNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIR 514
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
MK K ++K S +E + F D +P KE+Y+++ + ++K GY+P+
Sbjct: 515 SVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETD 574
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
ALHDVE+ED+E L HSEKLA+ F ++N T E +++TKNLRVC DCH A + IS I
Sbjct: 575 SALHDVEEEDKEGHLAVHSEKLAIVFALLN-TQEYQIRITKNLRVCGDCHIAAKLISKIV 633
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R+IIVRD NRFHHF+ G CSC DYW
Sbjct: 634 EREIIVRDTNRFHHFKDGVCSCGDYW 659
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/698 (38%), Positives = 408/698 (58%), Gaps = 51/698 (7%)
Query: 23 ASLRQIHSSLTTSGLINQALHLGAKI---IIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
+S+R IH+ + +GL N L + ++ G P A S+F++I +WN
Sbjct: 2 SSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFP-YAISVFDTIQEPNL--LIWN 58
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
TM R +A + V L+LY M G+ +SYTFPF+LK+CA + + EG+ +HG +++
Sbjct: 59 TMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKL 118
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFD------------------------------ 169
GF D YV +L+ MYA+ G+ +D KVFD
Sbjct: 119 GFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLF 178
Query: 170 -EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ-EGLLSDSVTIVSVASAVGQLGDV 227
E+ +D+VSW MI+ Y + +EAL LF++ + D T+V+V SA Q +
Sbjct: 179 DEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSI 238
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ VH + + F +L I N+++ +Y++ G VE A +FD + +D+ISWN+++ GY
Sbjct: 239 ELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGY 298
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
EALLLF EM S PN VT L ++ AC +LG+ +GR H YI N +K
Sbjct: 299 THMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI-NKKLKGVV 357
Query: 348 T----LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
T L+ +++DMYAKCGD+D A+ +F D S R++S+WN +I+G+ MHG A + F
Sbjct: 358 TNVSSLQTSLIDMYAKCGDIDAAQQVF-DSSMSNRSLSTWNAMISGFAMHGRANAAFDIF 416
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGR 462
S+M G++PD ITF +LSACSH+G++D GR F MT+ + P+++HY CM+D+LG
Sbjct: 417 SRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGH 476
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLM 517
+G EA +MI MP+ P+ +W +LL AC+IHG + A L ++EP ++G +VL+
Sbjct: 477 SGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLL 536
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPA-AFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
SNIYAA+ +W EV K+R + +KG+KK S IE + F D+++P +E+Y
Sbjct: 537 SNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGM 596
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
+E M V ++ AG++PD S L ++E+E RE L +HSEKLA+AFG+++ P + + KN
Sbjct: 597 LEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLTIMKN 656
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
LRVC +CH A + IS IY+R+II RD RF HF G C
Sbjct: 657 LRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/711 (36%), Positives = 399/711 (56%), Gaps = 50/711 (7%)
Query: 15 LLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+CN L R+IH+ + SG+ + + +I Y+ GE + A +F +
Sbjct: 185 ILKACNNYSMLEKAREIHTVVKASGM-ETDVAVATALITMYSKCGEISLACEIFQKMKER 243
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W +I+A A + E ELY M ++GIS N+ TF +L +C + + G+
Sbjct: 244 NVVS--WTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRR 301
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA-- 189
+H I G +D V AL+ MY KC D + FD MS RD++SW+ MI Y Q+
Sbjct: 302 IHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGY 361
Query: 190 ---EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
E +E L ++ ++EG+ + VT +S+ A G + + + +H F D
Sbjct: 362 QDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDR 421
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEK-------------------------------R 275
+Q +I MYA+CG++ +A VF ME R
Sbjct: 422 SLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTR 481
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
+++SWN M+ GY Q+G ++ L M+ +P+ VT + ++ AC L + + G+ H
Sbjct: 482 NVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVH 541
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ ++ D + +++ MY+KCG++ A +F+ I S R+ +WN ++AGYG HG
Sbjct: 542 AEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKI--SNRDTVAWNAMLAGYGQHGI 599
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYA 454
G +A++ F +ML+E V P+ ITFT+++SAC AGL+ EGR+ F M + +KP +HY
Sbjct: 600 GPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYG 659
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPE 509
CMVD+LGRAG L EA + I++MP P+ SVW ALL AC+ H E AA+++ +LEP
Sbjct: 660 CMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPS 719
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
+ +V +SNIYA + +W + K+R+ M +KGLKK S IE I F D +P
Sbjct: 720 NASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPE 779
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
++ ++E + E+K AGY PD+ LHDV++ +E L +HSEKLA+A+G++ P
Sbjct: 780 IDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGT 839
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLRVC DCH+A +FIS I +R+I+ RDANRFH+F+ GTCSC D+W
Sbjct: 840 PIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/511 (30%), Positives = 255/511 (49%), Gaps = 50/511 (9%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ +H L GL ++LG +I Y+ +G+ + +F + + W++MI AY
Sbjct: 98 KMVHKQLDELGLAID-IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVT--WSSMIAAY 154
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A N H + + + M+ + I N TF +LKAC + S++ + + +H + +G +D
Sbjct: 155 AGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDV 214
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V AL+ MY+KCG+ C++F +M R++VSWT +I A Q K EA L++K Q
Sbjct: 215 AVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQA 274
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ ++VT VS+ ++ + + + +H + D+ + N+++ MY +C ++ A
Sbjct: 275 GISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDA 334
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNG-----QASEALLLFDEMQNSDCKPNPVTALILVS 320
R FD M KRD+ISW++M+ GY Q+G E L + M+ PN VT + ++
Sbjct: 335 RETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILK 394
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA---------------------- 358
AC+ G+ + GR+ H I + D +L+ A+ +MYA
Sbjct: 395 ACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVA 454
Query: 359 ---------KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
KCGDL +AE +F+++ S RNV SWN++IAGY G K E S M E
Sbjct: 455 WASLLTMYIKCGDLTSAEKVFSEM--STRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVE 512
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
G +PD +T SIL AC ++ G+ A+ KL ++ + ++ M + G + EA
Sbjct: 513 GFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEA 572
Query: 470 ---FDMIKQMPLPPNDSV-WGALLLACRIHG 496
FD I D+V W A+L HG
Sbjct: 573 RTVFDKISN-----RDTVAWNAMLAGYGQHG 598
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 245/485 (50%), Gaps = 21/485 (4%)
Query: 89 GHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQ 148
G E ++L +++ G+ NS T+ +++ CA +GK+VH + G D Y+
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 149 AALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL 208
+L++ Y+K G +VF M++RD+V+W+ MI AY P +A F++ + +
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
+ +T +S+ A + KA+ +H + D+ + +++ MY++CG + A +
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F M++R+++SW +++ Q+ + +EA L+++M + PN VT + L+++C +
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
GR+ H +I ++ D + NA++ MY KC + A F+ + S+R+V SW+ +IA
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRM--SKRDVISWSAMIA 354
Query: 389 GYGMHGHGRK-----ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
GY G+ K + +M EGV P+ +TF SIL ACS G +++GR+ A+++K
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AAN 501
+ + + + +M + G +YEA + +M N W +LL G++ A
Sbjct: 415 VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLLTMYIKCGDLTSAEK 473
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG-----------LKKPAAFSV 550
++ + + LM YA S +V +L MK +G L+ A S
Sbjct: 474 VFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSA 533
Query: 551 IEYGK 555
+E GK
Sbjct: 534 LERGK 538
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 247/666 (37%), Positives = 393/666 (59%), Gaps = 14/666 (2%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSLFNSIHNDKSYSFLWNTM 81
L Q+H++L SG + + ++ P A SLF + +N +
Sbjct: 32 LPQLHAALIKSGELTGSPKCFHSLL--EAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVL 89
Query: 82 IRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
+RA + GH + L L+ M + + + +T LK+C+ + G+ + ++ G
Sbjct: 90 MRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRG 149
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
++D +V ++L+ MYA C +FD + +V W +ITAY + E + +F+
Sbjct: 150 LMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFK 209
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ G+ D +T+VSV +A G++GD + V Y + + + +++ MYA+CG
Sbjct: 210 GMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCG 269
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
+ KAR +FD M+ RD+++W++M++GY Q Q EAL LF EMQ ++ +PN VT + ++S
Sbjct: 270 ELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLS 329
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
AC LG+ + G+ H YI + + L A++D YAKCG +D A F + +N
Sbjct: 330 ACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESM--PVKNS 387
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
+W LI G +G GR+ALE FS M + ++P +TF +L ACSH+ L++EGR+ F
Sbjct: 388 WTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDS 447
Query: 441 MTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH---- 495
MT+ +KP +HY C+VD+LGRAG + EA+ I+ MP+ PN +W ALL +C +H
Sbjct: 448 MTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVE 507
Query: 496 -GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
GE A + L P H+G ++L+SNIYA+ +W+ +R++MK++G++K S+IE
Sbjct: 508 IGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELD 567
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+ F D +P KE+Y+KVE M IKMAGY+P+ + +V++ ++E +++HSE
Sbjct: 568 GVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSE 627
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+AFG+M L P A ++++KNLRVC DCHSA + IS +Y R+I+VRD NRFHHF+ GTC
Sbjct: 628 KLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTC 687
Query: 675 SCNDYW 680
SCNDYW
Sbjct: 688 SCNDYW 693
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 202/404 (50%), Gaps = 10/404 (2%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LKSC+ + +L R I + GL+ L + +I Y + + A+ LF+++ ++
Sbjct: 126 LKSCSRMCTLDVGRGIQAYAVKRGLMADRFVL-SSLIHMYASCRDVAAAQLLFDAV--EE 182
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+ +WN +I AY NG+ +E +E++ M G++ + T V+ AC GK V
Sbjct: 183 NGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWV 242
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
+ G + + + AL+DMYAKCG+ ++FD M RD+V+W+ MI+ Y QA++
Sbjct: 243 AEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQC 302
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EAL LF + Q + + VT+VSV SA LG + + VH Y + + ++
Sbjct: 303 REALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTAL 362
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V YA+CG ++ A F+ M ++ +W +++ G NG+ EAL LF M+ + +P
Sbjct: 363 VDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTD 422
Query: 313 VTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++ AC++ + GR+ F + +K A V+D+ + G +D A
Sbjct: 423 VTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIR 482
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+ P E N W L++ +H + E Q++ + P H
Sbjct: 483 TM-PIEPNAVIWRALLSSCAVHKNVEIGEEALKQIV--SLNPSH 523
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 271/708 (38%), Positives = 401/708 (56%), Gaps = 59/708 (8%)
Query: 29 HSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI-HNDKSYSFLWNTMIRAYAN 87
H++++ SG + A ++ Y G A ++F+ + H WN+++ AY
Sbjct: 282 HATVSRSGFASNVFVCNA-VVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMW 340
Query: 88 NGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
L L+ M R +S + + +L ACAS + L G+ VHG IR+G + D +
Sbjct: 341 ASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVF 400
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE- 205
V A+VDMYAKCG+ ++ KVF M +D+VSW M+T Y QA + E AL LF++ +E
Sbjct: 401 VGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEEN 460
Query: 206 ----------------------------------GLLSDSVTIVSVASAVGQLGDVLKAQ 231
G + VT+VS+ SA +G +L +
Sbjct: 461 IELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGK 520
Query: 232 AVHGYAI--------CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM--EKRDLISWN 281
H YAI + +DL + N ++ MYA+C + E AR +FD + + RD+++W
Sbjct: 521 ETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWT 580
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSD--CKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
M+ GY Q+G A+ AL LF M D KPN T + AC L + + GR+ H Y++
Sbjct: 581 VMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVL 640
Query: 340 -NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
N + + N ++DMY+K GD+DTA+ +F+++ +RN SW L+ GYGMHG G
Sbjct: 641 RNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNM--PQRNAVSWTSLMTGYGMHGRGED 698
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMV 457
AL F +M + + PD ITF +L ACSH+G++D G F M+K V P +HYACMV
Sbjct: 699 ALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMV 758
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTG 512
D+ GRAG L EA +I +MP+ P VW ALL ACR+H GE AAN L +LE + G
Sbjct: 759 DLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDG 818
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
+ L+SNIYA + +W++V ++R MK G+KK S I+ K + F+ DR +P ++
Sbjct: 819 SYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQ 878
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+Y+ + + IK GY+P S ALHDV+DE++ +L HSEKLA+A+GI+ L P A ++
Sbjct: 879 IYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIR 938
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+TKNLR+C DCHSA +IS I +II+RD++RFHHF+ G+CSC YW
Sbjct: 939 ITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 265/532 (49%), Gaps = 54/532 (10%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
LK CN LA + +H GL+ HL +I Y A L + S
Sbjct: 168 LKECNSLAHAKLLHQQSIMQGLL---FHLATNLIGTYIASNSTAYAILLLERLPPSPSSV 224
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
F WN +IR + G + LY M+ G + + YTFPFV KACA+ S + G +H
Sbjct: 225 FWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHAT 284
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM---SVRDLVSWTVMITAYEQAEKP 192
+ R+GF S+ +V A+V MY KCG +FD++ ++DLVSW +++AY A
Sbjct: 285 VSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDA 344
Query: 193 EEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
AL LF K L+S D +++V++ A L L+ + VHG++I + ++D+ + N+
Sbjct: 345 NTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNA 404
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-------- 303
+V MYA+CG +E+A VF M+ +D++SWN+M+TGY Q G+ AL LF+ M
Sbjct: 405 VVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELD 464
Query: 304 -------------------------QNSDC--KPNPVTALILVSACTYLGSRQLGRKFHG 336
Q DC +PN VT + L+SAC +G+ G++ H
Sbjct: 465 VVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHC 524
Query: 337 YIINSNMKIDAT--------LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
Y I + +D + N ++DMYAKC + A MF+ + P +R+V +W V+I
Sbjct: 525 YAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIG 584
Query: 389 GYGMHGHGRKALEFFSQM--LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
GY HG AL+ FS M +++ +KP+ T + L AC+ + GR+ A + +
Sbjct: 585 GYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFY 644
Query: 447 KPEVKHYA-CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ A C++DM ++G + A + MP N W +L+ +HG
Sbjct: 645 GSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMTGYGMHGR 695
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 9/276 (3%)
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM--EKRD 276
+A+ + + A+ +H +I L L +++ Y + A L+ + +
Sbjct: 166 TALKECNSLAHAKLLHQQSIMQGLLFHLA--TNLIGTYIASNSTAYAILLLERLPPSPSS 223
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
+ WN ++ + G + L+ +M++ P+ T + AC L S LG H
Sbjct: 224 VFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHA 283
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI-HPSERNVSSWNVLIAGYGMHGH 395
+ S + + NAV+ MY KCG L A NMF+D+ H +++ SWN +++ Y
Sbjct: 284 TVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASD 343
Query: 396 GRKALEFFSQMLEEGV-KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
AL F +M + PD I+ +IL AC+ GR+ + + +V
Sbjct: 344 ANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGN 403
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
+VDM + G + EA + ++M D V W A++
Sbjct: 404 AVVDMYAKCGKMEEANKVFQRMKF--KDVVSWNAMV 437
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/678 (37%), Positives = 388/678 (57%), Gaps = 42/678 (6%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
TE +++L + +L+++H + + +G K++ Y GEP AR +F+
Sbjct: 20 TEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDE 79
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I DK+ F +N MIR+Y NN + L +Y TM G + YT+P VLKA + + +
Sbjct: 80 I-TDKNVVF-FNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLW 137
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +HG +++ G + YV L+ MY KC + +V DE+ RD+VSW M++ Y
Sbjct: 138 VGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYA 197
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q + +AL L ++ + L + T+ S+ AV
Sbjct: 198 QNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN------------------------ 233
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
NV + +F + K+ +ISWN M+ Y+ N EA++L+ +M+ +
Sbjct: 234 ---------TTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANG 284
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+P+ V+ + ++ A L + LGR+ H + + + L NA++DMYAKCG L A
Sbjct: 285 VEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDAR 344
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+FN + R+V SW +I+ YG G GR A+ F++M G+ PD I F S+L+ACSH
Sbjct: 345 AVFNQMQ--FRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSH 402
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
AGL+D+GR F M + + P+++H+AC+VD+LGRAG + EA+ I+QMPL P++ VWG
Sbjct: 403 AGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGP 462
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACR++ G +AA+ L L PEH+GY+VL+SNIYA + +W +V +R M+ KG+
Sbjct: 463 LLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGI 522
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KK S +E + F D +P K++Y++++ + ++K GYMP+ ALHDVE+
Sbjct: 523 KKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEE 582
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
ED+E+ L HSEKLAVAF I+N P ++VTKNLRVC DCH A + IS I R+II+RD
Sbjct: 583 EDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRD 642
Query: 663 ANRFHHFEGGTCSCNDYW 680
+RFHHF+ G CSC DYW
Sbjct: 643 THRFHHFQEGCCSCGDYW 660
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/675 (37%), Positives = 394/675 (58%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++++C L +L R IH + GL + + A ++ Y E AR LF+ +
Sbjct: 36 VIRACRDLKNLQMGRLIHHIVYKFGL-DLDHFVCAALVDMYVKCREIEDARFLFDKMQER 94
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ W MI YA G E+L L+ MR G+ + V+ ACA + + ++
Sbjct: 95 DLVT--WTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARI 152
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+ I R F D + A++DMYAKCG + ++FD M ++++SW+ MI AY +
Sbjct: 153 IDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ 212
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+AL LF+ G+L D +T+ S+ A L ++ + +H D + +
Sbjct: 213 GRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAA 272
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MY +C +E AR +FD M +RDL++W M+ GY + G A+E+L+LFD+M+ P+
Sbjct: 273 LVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPD 332
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V + +V AC LG+ R YI ++D L A++DM+AKCG +++A +F+
Sbjct: 333 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 392
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ E+NV SW+ +IA YG HG GRKAL+ F ML G+ P+ IT S+L ACSHAGL+
Sbjct: 393 RM--EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 450
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG + F+ M + SV+ +VKHY C+VD+LGRAG L EA +I+ M + ++ +WGA L
Sbjct: 451 EEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLG 510
Query: 491 ACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACR H ++ AA L +L+P++ G+++L+SNIYA + +W +V K R+ M + LKK
Sbjct: 511 ACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKI 570
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
++ IE F D +P KE+Y+ ++S+ ++++ GY+PD + LHDV++E +
Sbjct: 571 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 630
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+L HSEKLA+AFG++ +++ KNLRVC DCH+ + +S I R IIVRDANR
Sbjct: 631 IGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 690
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSC DYW
Sbjct: 691 FHHFKEGACSCGDYW 705
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 238/417 (57%), Gaps = 3/417 (0%)
Query: 81 MIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
M+ +A G + + + R G ++YT PFV++AC + G+++H + + G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
D +V AALVDMY KC + +D +FD+M RDLV+WTVMI Y + K E+L+LF+
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
K ++EG++ D V +V+V A +LG + KA+ + Y F D+ + +++ MYA+CG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
VE AR +FD ME++++ISW++M+ Y +GQ +AL LF M +S P+ +T L+
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
AC+ L + Q+GR H + + +D + A++DMY KC +++ A +F+ + ER++
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKM--PERDL 298
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
+W V+I GY G+ ++L F +M EEGV PD + +++ AC+ G + + R
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358
Query: 441 MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ + + +V M+DM + GC+ A ++ +M N W A++ A HG+
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 414
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/685 (37%), Positives = 401/685 (58%), Gaps = 19/685 (2%)
Query: 7 STEGFYDQLLKSCNFLAS---LRQIHSSLTTSGLINQAL-HLGAKIIIK-YTTYGEPNTA 61
S++ L+K+ + S +Q+H+ + Q+L H A I+I YT + A
Sbjct: 3 SSKALIKTLIKNPTRIKSKSQAKQLHAQFIRT----QSLSHTSASIVISIYTNLKLLHEA 58
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
+F ++ + + W ++IR + + L + MR SG + FP VLK+C
Sbjct: 59 LLVFKTLESPPVLA--WKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCT 116
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
+ G+ VHG I+R G D Y AL++MY+K D KVF+ M +D+VS+
Sbjct: 117 MMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNT 176
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+I Y Q+ E+AL + ++ L D+ T+ SV + DVLK + +HGY I
Sbjct: 177 VIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKG 236
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
D+ I +S+V MYA+ +E + VF + +RD ISWNS++ GY+QNG+ +EAL LF
Sbjct: 237 IDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFR 296
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
+M ++ +P V ++ AC +L + LG++ HGY++ + + +A++DMY+KCG
Sbjct: 297 QMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCG 356
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
++ A +F+ ++ + SW +I G+ +HGHG +A+ F +M +GVKP+ + F ++
Sbjct: 357 NIQAARKIFDRMNLHDE--VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 414
Query: 422 LSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L+ACSH GL+DE F MTK+ + E++HYA + D+LGRAG L EA+D I +M + P
Sbjct: 415 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEP 474
Query: 481 NDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
SVW LL +C +H E A +F ++ E+ G +VLM N+YA++ +W+E+ KLR
Sbjct: 475 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRL 534
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
++ KGL+K A S IE GF + DR +P + + ++++ +++ GY+ D S
Sbjct: 535 RVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSG 594
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
LHDV++E + +L HSE+LAVAFGI+N P ++VTKN+R+C DCH A +FIS I
Sbjct: 595 VLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITE 654
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R+IIVRD +RFHHF G+CSC DYW
Sbjct: 655 REIIVRDNSRFHHFNRGSCSCGDYW 679
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/664 (37%), Positives = 398/664 (59%), Gaps = 15/664 (2%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTT-YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
I+ + +G + + +G ++I + G+ +A +F+ + + W MI +A
Sbjct: 168 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVT--WTLMITRFA 225
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
G + ++L+ M SG + +T+ VL AC L+ GK +H +IR G D
Sbjct: 226 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 285
Query: 147 VQAALVDMYAKC---GQTDDGCKVFDEMSVRDLVSWTVMITAYEQA-EKPEEALILFQKT 202
V +LVDMYAKC G DD KVF++M +++SWT +ITAY Q+ E +EA+ LF K
Sbjct: 286 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 345
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+ + + SV A G L D + V+ YA+ C+ NS+++MYAR G +
Sbjct: 346 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 405
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
E AR FD++ +++L+S+N+++ GY +N ++ EA LLF+E+ ++ + T L+S
Sbjct: 406 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 465
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+G+ G + HG ++ K + + NA++ MY++CG+++ A +FN++ +RNV S
Sbjct: 466 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME--DRNVIS 523
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W +I G+ HG +ALE F +MLE G KP+ IT+ ++LSACSH G+I EG+K F M
Sbjct: 524 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 583
Query: 443 KL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--- 498
K + P ++HYACMVD+LGR+G L EA + I MPL + VW LL ACR+HG
Sbjct: 584 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 643
Query: 499 --AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
AA + + EP+ ++L+SN++A++ +W++V K+R+ MK + L K A S IE
Sbjct: 644 RHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENR 703
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ FH + +P ++Y++++ +A +IK GY+PD LHD+E+E +E L HSEK+
Sbjct: 704 VHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKI 763
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
AVAFG+++ + +++ KNLRVC DCH+A ++IS R+I+VRD+NRFHH + G CSC
Sbjct: 764 AVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSC 823
Query: 677 NDYW 680
NDYW
Sbjct: 824 NDYW 827
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 252/502 (50%), Gaps = 16/502 (3%)
Query: 5 GPSTEGFYDQLLKSC----NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
P Y LLKSC NF + +H L SGL ++ L I + Y+ G+ T
Sbjct: 40 APPDLTTYSILLKSCIRFRNFQLG-KLVHRKLMQSGLELDSVVLNTLISL-YSKCGDTET 97
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR +F + N + W+ M+ +ANN + + + M G N Y F V++AC
Sbjct: 98 ARLIFEGMGNKRDL-VSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRAC 156
Query: 121 ASNSLILEGKVVHGDIIRTGFL-SDSYVQAALVDMYAK-CGQTDDGCKVFDEMSVRDLVS 178
++ + G++++G +++TG+L +D V L+DM+ K G KVFD+M R+LV+
Sbjct: 157 SNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVT 216
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
WT+MIT + Q +A+ LF + G + D T SV SA +LG + + +H I
Sbjct: 217 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 276
Query: 239 CNAFLEDLCIQNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA-S 294
D+C+ S+V MYA+C G+V+ +R VF+ M + +++SW +++T Y+Q+G+
Sbjct: 277 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDK 336
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EA+ LF +M + +PN + ++ AC L G + + Y + + + N+++
Sbjct: 337 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI 396
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
MYA+ G ++ A F+ + E+N+ S+N ++ GY + +A F+++ + G+
Sbjct: 397 SMYARSGRMEDARKAFDILF--EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 454
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
TF S+LS + G + +G + + K K ++ M R G + AF +
Sbjct: 455 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 514
Query: 475 QMPLPPNDSVWGALLLACRIHG 496
+M N W +++ HG
Sbjct: 515 EME-DRNVISWTSMITGFAKHG 535
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 208/405 (51%), Gaps = 15/405 (3%)
Query: 90 HCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA 149
H TL+L M + + T+ +LK+C GK+VH ++++G DS V
Sbjct: 27 HAFSTLDL---MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLN 83
Query: 150 ALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL 208
L+ +Y+KCG T+ +F+ M + RDLVSW+ M++ + +A+ F + G
Sbjct: 84 TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 143
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYAR-CGNVEKAR 266
+ +V A + ++G+ + +LE D+C+ ++ M+ + G++ A
Sbjct: 144 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 203
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VFD M +R+L++W M+T + Q G A +A+ LF +M+ S P+ T ++SACT LG
Sbjct: 204 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 263
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC---GDLDTAENMFNDIHPSERNVSSW 383
LG++ H +I + +D + +++DMYAKC G +D + +F + E NV SW
Sbjct: 264 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM--PEHNVMSW 321
Query: 384 NVLIAGYGMHGH-GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
+I Y G ++A+E F +M+ ++P+H +F+S+L AC + G + ++
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 381
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYE---AFDMIKQMPLPPNDSV 484
KL + ++ M R+G + + AFD++ + L +++
Sbjct: 382 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 426
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+ A D M + P+ T IL+ +C + QLG+ H ++ S +++D+ +
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N ++ +Y+KCGD +TA +F + ++R++ SW+ +++ + + +A+ F MLE G
Sbjct: 83 NTLISLYSKCGDTETARLIFEGM-GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 141
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC-MVDML----GRAGC 465
P+ F +++ ACS+A G + + K C ++DM G G
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 201
Query: 466 LYEAFDMIKQMPL 478
Y+ FD + + L
Sbjct: 202 AYKVFDKMPERNL 214
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/708 (36%), Positives = 410/708 (57%), Gaps = 47/708 (6%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L S L ++HS + T GL + ++ AK+I KY + +P ++ S+F + + +
Sbjct: 23 LASAATTTQLHKLHSLIITLGL-HHSVIFSAKLIAKYAHFRDPTSSFSVFR-LASPSNNV 80
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
+LWN++IRA +NG E L LYS +R + ++YTFP V+ ACA K +H
Sbjct: 81 YLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDR 140
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
++ GF SD Y+ AL+DMY + D KVF+EM +RD+VSW +I+ Y EA
Sbjct: 141 VLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEA 200
Query: 196 LILFQKTQQ------EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
L ++ ++ + D +TI S+ A G LGD+ + VH Y I + + D
Sbjct: 201 LEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 260
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ----- 304
N ++ MYA+CGN+ ++ VF M+ +D +SWNSM+ YIQNG+ ++L +F+ M+
Sbjct: 261 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDII 320
Query: 305 -----------NSDCK---------------PNPVTALILVSACTYLGSRQLGRKFHGYI 338
+ DC P+ T L ++ C+ L +++ G++ HG I
Sbjct: 321 TWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCI 380
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
++ D + N +++MY+KCG L + +F + ++V +W LI+ GM+G G+K
Sbjct: 381 FKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM--KTKDVVTWTALISACGMYGEGKK 438
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMV 457
A+ F +M G+ PDH+ F +I+ ACSH+GL++EG F M K ++P ++HYAC+V
Sbjct: 439 AVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVV 498
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG--EIA---ANYLFQLEPEHTG 512
D+L R+ L +A D I MPL P+ S+WGALL ACR+ G EIA + + +L P+ TG
Sbjct: 499 DLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTG 558
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
Y+VL+SNIYAA KW +V +R+ +K +GLKK S +E + F T + ++E
Sbjct: 559 YYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEE 618
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
V K + +A + GY+ +L LHD++++++ +L HSE+LA+AFG++N P +Q
Sbjct: 619 VNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQ 678
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLRVC DCH+ ++IS I +R+++VRDANRFH F+ G CSC DYW
Sbjct: 679 VMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/613 (39%), Positives = 376/613 (61%), Gaps = 12/613 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W MI +A G + ++L+ M SG + +T+ VL AC L+ GK +H +I
Sbjct: 19 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 78
Query: 138 RTGFLSDSYVQAALVDMYAKC---GQTDDGCKVFDEMSVRDLVSWTVMITAYEQA-EKPE 193
R G D V +LVDMYAKC G DD KVF++M +++SWT +ITAY Q+ E +
Sbjct: 79 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDK 138
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EA+ LF K + + + SV A G L D + V+ YA+ C+ NS++
Sbjct: 139 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI 198
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
+MYAR G +E AR FD++ +++L+S+N+++ GY +N ++ EA LLF+E+ ++ +
Sbjct: 199 SMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAF 258
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T L+S +G+ G + HG ++ K + + NA++ MY++CG+++ A +FN++
Sbjct: 259 TFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 318
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
+RNV SW +I G+ HG +ALE F +MLE G KP+ IT+ ++LSACSH G+I E
Sbjct: 319 --EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 376
Query: 434 GRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
G+K F M K + P ++HYACMVD+LGR+G L EA + I MPL + VW LL AC
Sbjct: 377 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGAC 436
Query: 493 RIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+HG AA + + EP+ ++L+SN++A++ +W++V K+R+ MK + L K A
Sbjct: 437 RVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAG 496
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S IE + FH + +P ++Y++++ +A +IK GY+PD LHD+E+E +E
Sbjct: 497 CSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQ 556
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
L HSEK+AVAFG+++ + +++ KNLRVC DCH+A ++IS R+I+VRD+NRFH
Sbjct: 557 FLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFH 616
Query: 668 HFEGGTCSCNDYW 680
H + G CSCNDYW
Sbjct: 617 HIKNGVCSCNDYW 629
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 171/335 (51%), Gaps = 7/335 (2%)
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
KVFD+M R+LV+WT+MIT + Q +A+ LF + G + D T SV SA +LG
Sbjct: 6 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNS 282
+ + +H I D+C+ S+V MYA+C G+V+ +R VF+ M + +++SW +
Sbjct: 66 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125
Query: 283 MLTGYIQNGQA-SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
++T Y Q+G+ EA+ LF +M + +PN + ++ AC L G + + Y +
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + N+++ MYA+ G ++ A F+ + E+N+ S+N ++ GY + +A
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILF--EKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLG 461
F+++ + G+ TF S+LS + G + +G + + K K ++ M
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
R G + AF + +M N W +++ HG
Sbjct: 304 RCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 337
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 243/613 (39%), Positives = 376/613 (61%), Gaps = 12/613 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W MI +A G + ++L+ M SG + +T+ VL AC L+ GK +H +I
Sbjct: 24 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 83
Query: 138 RTGFLSDSYVQAALVDMYAKC---GQTDDGCKVFDEMSVRDLVSWTVMITAYEQA-EKPE 193
R G D V +LVDMYAKC G DD KVF++M +++SWT +ITAY Q+ E +
Sbjct: 84 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDK 143
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EA+ LF K + + + SV A G L D + V+ YA+ C+ NS++
Sbjct: 144 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI 203
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
+MYAR G +E AR FD++ +++L+S+N+++ GY +N ++ EA LLF+E+ ++ +
Sbjct: 204 SMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAF 263
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T L+S +G+ G + HG ++ K + + NA++ MY++CG+++ A +FN++
Sbjct: 264 TFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 323
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
+RNV SW +I G+ HG +ALE F +MLE G KP+ IT+ ++LSACSH G+I E
Sbjct: 324 E--DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 381
Query: 434 GRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
G+K F M K + P ++HYACMVD+LGR+G L EA + I MPL + VW LL AC
Sbjct: 382 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGAC 441
Query: 493 RIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+HG AA + + EP+ ++L+SN++A++ +W++V K+R+ MK + L K A
Sbjct: 442 RVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAG 501
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S IE + FH + +P ++Y++++ +A +IK GY+PD LHD+E+E +E
Sbjct: 502 CSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQ 561
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
L HSEK+AVAFG+++ + +++ KNLRVC DCH+A ++IS R+I+VRD+NRFH
Sbjct: 562 FLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFH 621
Query: 668 HFEGGTCSCNDYW 680
H + G CSCNDYW
Sbjct: 622 HIKNGVCSCNDYW 634
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 171/335 (51%), Gaps = 7/335 (2%)
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
KVFD+M R+LV+WT+MIT + Q +A+ LF + G + D T SV SA +LG
Sbjct: 11 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNS 282
+ + +H I D+C+ S+V MYA+C G+V+ +R VF+ M + +++SW +
Sbjct: 71 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130
Query: 283 MLTGYIQNGQA-SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
++T Y Q+G+ EA+ LF +M + +PN + ++ AC L G + + Y +
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + N+++ MYA+ G ++ A F+ + E+N+ S+N ++ GY + +A
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILF--EKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLG 461
F+++ + G+ TF S+LS + G + +G + + K K ++ M
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
R G + AF + +M N W +++ HG
Sbjct: 309 RCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 342
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/664 (37%), Positives = 398/664 (59%), Gaps = 15/664 (2%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTT-YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
I+ + +G + + +G ++I + G+ +A +F+ + + W MI +A
Sbjct: 150 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVT--WTLMITRFA 207
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
G + ++L+ M SG + +T+ VL AC L+ GK +H +IR G D
Sbjct: 208 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVC 267
Query: 147 VQAALVDMYAKC---GQTDDGCKVFDEMSVRDLVSWTVMITAYEQA-EKPEEALILFQKT 202
V +LVDMYAKC G DD KVF++M +++SWT +ITAY Q+ E +EA+ LF K
Sbjct: 268 VGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 327
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+ + + SV A G L D + V+ YA+ C+ NS+++MYAR G +
Sbjct: 328 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 387
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
E AR FD++ +++L+S+N+++ GY +N ++ EA LLF+E+ ++ + T L+S
Sbjct: 388 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGA 447
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+G+ G + HG ++ K + + NA++ MY++CG+++ A +FN++ +RNV S
Sbjct: 448 ASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME--DRNVIS 505
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W +I G+ HG +ALE F +MLE G KP+ IT+ ++LSACSH G+I EG+K F M
Sbjct: 506 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 565
Query: 443 KL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--- 498
K + P ++HYACMVD+LGR+G L EA + I MPL + VW LL ACR+HG
Sbjct: 566 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 625
Query: 499 --AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
AA + + EP+ ++L+SN++A++ +W++V K+R+ MK + L K A S IE
Sbjct: 626 RHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENR 685
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ FH + +P ++Y++++ +A +IK GY+PD LHD+E+E +E L HSEK+
Sbjct: 686 VHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKI 745
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
AVAFG+++ + +++ KNLRVC DCH+A ++IS R+I+VRD+NRFHH + G CSC
Sbjct: 746 AVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSC 805
Query: 677 NDYW 680
NDYW
Sbjct: 806 NDYW 809
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 252/502 (50%), Gaps = 16/502 (3%)
Query: 5 GPSTEGFYDQLLKSC----NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
P Y LLKSC NF + +H L SGL ++ L I + Y+ G+ T
Sbjct: 22 APPDLTTYSILLKSCIRFRNFQLG-KLVHRKLMQSGLELDSVVLNTLISL-YSKCGDTET 79
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR +F + N + W+ M+ +ANN + + + M G N Y F V++AC
Sbjct: 80 ARLIFEGMGNKRDL-VSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRAC 138
Query: 121 ASNSLILEGKVVHGDIIRTGFL-SDSYVQAALVDMYAK-CGQTDDGCKVFDEMSVRDLVS 178
++ + G++++G +++TG+L +D V L+DM+ K G KVFD+M R+LV+
Sbjct: 139 SNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVT 198
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
WT+MIT + Q +A+ LF + G + D T SV SA +LG + + +H I
Sbjct: 199 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 258
Query: 239 CNAFLEDLCIQNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA-S 294
D+C+ S+V MYA+C G+V+ +R VF+ M + +++SW +++T Y+Q+G+
Sbjct: 259 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDK 318
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EA+ LF +M + +PN + ++ AC L G + + Y + + + N+++
Sbjct: 319 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI 378
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
MYA+ G ++ A F+ + E+N+ S+N ++ GY + +A F+++ + G+
Sbjct: 379 SMYARSGRMEDARKAFDILF--EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 436
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
TF S+LS + G + +G + + K K ++ M R G + AF +
Sbjct: 437 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 496
Query: 475 QMPLPPNDSVWGALLLACRIHG 496
+M N W +++ HG
Sbjct: 497 EME-DRNVISWTSMITGFAKHG 517
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 208/405 (51%), Gaps = 15/405 (3%)
Query: 90 HCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA 149
H TL+L M + + T+ +LK+C GK+VH ++++G DS V
Sbjct: 9 HAFSTLDL---MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLN 65
Query: 150 ALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL 208
L+ +Y+KCG T+ +F+ M + RDLVSW+ M++ + +A+ F + G
Sbjct: 66 TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 125
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYAR-CGNVEKAR 266
+ +V A + ++G+ + +LE D+C+ ++ M+ + G++ A
Sbjct: 126 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 185
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VFD M +R+L++W M+T + Q G A +A+ LF +M+ S P+ T ++SACT LG
Sbjct: 186 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 245
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC---GDLDTAENMFNDIHPSERNVSSW 383
LG++ H +I + +D + +++DMYAKC G +D + +F + E NV SW
Sbjct: 246 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM--PEHNVMSW 303
Query: 384 NVLIAGYGMHGH-GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
+I Y G ++A+E F +M+ ++P+H +F+S+L AC + G + ++
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 363
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYE---AFDMIKQMPLPPNDSV 484
KL + ++ M R+G + + AFD++ + L +++
Sbjct: 364 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 408
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+ A D M + P+ T IL+ +C + QLG+ H ++ S +++D+ +
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N ++ +Y+KCGD +TA +F + ++R++ SW+ +++ + + +A+ F MLE G
Sbjct: 65 NTLISLYSKCGDTETARLIFEGM-GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 123
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC-MVDML----GRAGC 465
P+ F +++ ACS+A G + + K C ++DM G G
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183
Query: 466 LYEAFDMIKQMPL 478
Y+ FD + + L
Sbjct: 184 AYKVFDKMPERNL 196
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/654 (38%), Positives = 389/654 (59%), Gaps = 45/654 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A S+F SI S WNTMIR +A + + L LY M G+S NSYTFPF+ K+C
Sbjct: 31 AISVFKSIQEPNQLS--WNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSC 88
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------- 169
A + EGK +H I++ G D +V +L+ MYA+ G +D KVFD
Sbjct: 89 AKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYT 148
Query: 170 --------------------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
E+ ++D+VSW MI+ Y + + +EAL LF + + +
Sbjct: 149 AMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKP 208
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D T+ +V S G+V + +H + + F +L + N+++ +Y++CG +E+A +F
Sbjct: 209 DESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLF 268
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+ ++ +D+ISWN+++ GY EALL+F EM PN VT L ++ AC +LG+
Sbjct: 269 EGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAID 328
Query: 330 LGRKFHGYIINSNMK---IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+GR H YI + +K + +L+ +++DMYAKCG+++ A +F+ I +++SS N +
Sbjct: 329 IGRWIHVYI-DKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTI--LNKSLSSCNAM 385
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLS 445
I G+ MHG A + S+M ++G++PD ITF +LSACSHAGL D GRK F MT
Sbjct: 386 IFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYR 445
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAA 500
++P+++HY CM+D+LGR+G EA ++I M + P+ +WG+LL AC+IH GE+ A
Sbjct: 446 IEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIA 505
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
L ++EP++ G +VL+SNIYA S +W +V ++R + +KGLKK S IE + F
Sbjct: 506 QKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEF 565
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D+ +P KE+YK +E + + G++ D S L ++E+E +E L+YHSEKLA+AF
Sbjct: 566 LIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAF 625
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
G+++ P +++ KNLRVC +CH A + IS IY+R+II RD +RFHHF+ G C
Sbjct: 626 GLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/680 (39%), Positives = 398/680 (58%), Gaps = 17/680 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +LK+C+ L ++ +IHS GL + + ++ Y G A+ LF+S+
Sbjct: 112 YPFVLKACSGLLAIEDGVEIHSHAKMFGL-ESDVFVCTALVDFYAKCGILVEAQRLFSSM 170
Query: 69 -HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
H D WN MI + G C + ++L M+ GI NS T VL +
Sbjct: 171 SHRD---VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALG 227
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
GK +HG +R F + V L+DMYAKC K+FD M VR+ VSW+ MI Y
Sbjct: 228 HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV 287
Query: 188 QAEKPEEALILF-QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
++ +EAL LF Q ++ + VT+ SV A +L D+ + + +H Y I + D+
Sbjct: 288 XSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDI 347
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N++++MYA+CG ++ A FD M +D +S++++++G +QNG A+ AL +F MQ S
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
P+ T L ++ AC++L + Q G HGY+I D + NA++DMY+KCG + A
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+FN + ++ SWN +I GYG+HG G +AL F +L G+KPD ITF +LS+CS
Sbjct: 468 REVFNRM--DRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 525
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL+ EGR F M++ S+ P ++H CMVD+LGRAG + EA I+ MP P+ +W
Sbjct: 526 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 585
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
ALL ACRIH GE + + L PE TG FVL+SNIY+A+ +W + +R K+
Sbjct: 586 SALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDW 645
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
GLKK S IE + F D+ + ++ +K+E + VE+K GY + S DV
Sbjct: 646 GLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDV 705
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E+E++E +L YHSEKLA+AFGI+NL + VTKNLRVC DCH+A +F++ I +R+I V
Sbjct: 706 EEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITV 765
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RDANRFHHF+ GTC+C D+W
Sbjct: 766 RDANRFHHFKNGTCNCGDFW 785
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 264/522 (50%), Gaps = 23/522 (4%)
Query: 12 YDQLLKSC---NFLASLRQIHSSL--TTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
Y LL++C L ++IH TS + LH K+ Y + + AR LF+
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLH---KLTRLYLSCNQVVLARRLFD 67
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
I N LWN +IRAYA NG ++LY +M G+ N YT+PFVLKAC+ I
Sbjct: 68 EIPNPSV--ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+G +H G SD +V ALVD YAKCG + ++F MS RD+V+W MI
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
++A+ L + Q+EG+ +S TIV V VG+ + +A+HGY + +F +
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGV 245
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ ++ MYA+C + AR +FD+M R+ +SW++M+ GY+ + EAL LFD+M
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILK 305
Query: 307 DC-KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
D P PVT ++ AC L GRK H YII +D L N ++ MYAKCG +D
Sbjct: 306 DAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDD 365
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A F+ ++P ++ S++ +++G +G+ AL F M G+ PD T +L AC
Sbjct: 366 AIRFFDXMNP--KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPAC 423
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV- 484
SH + G + + ++DM + G + A ++ +M +D V
Sbjct: 424 SHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRM--DRHDIVS 481
Query: 485 WGALLLACRIHG-EIAANYLFQ------LEPEHTGYFVLMSN 519
W A+++ IHG + A LF L+P+ + L+S+
Sbjct: 482 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 523
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/661 (38%), Positives = 380/661 (57%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H+ + G A ++ Y G + A +F + + S WN +I
Sbjct: 222 RQVHAMVVRMGYDKDVFTANA-LVDMYMKMGRVDIASVIFEKMPDSDVVS--WNALISGC 278
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NGH +EL M+ SG+ N +T +LKAC+ G+ +HG +I+ SD
Sbjct: 279 VLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDD 338
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
Y+ LVDMYAK DD KVFD M RDL+ +I+ + +EAL LF + ++E
Sbjct: 339 YIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKE 398
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
GL + T+ +V + L + VH A+ F+ D + N ++ Y +C + A
Sbjct: 399 GLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDA 458
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ D+I+ SM+T Q A+ LF EM +P+P L++AC L
Sbjct: 459 NRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASL 518
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H ++I DA NA++ YAKCG ++ AE F+ + ER V SW+
Sbjct: 519 SAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL--PERGVVSWSA 576
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I G HGHG++ALE F +M++EG+ P+HIT TS+L AC+HAGL+DE ++ F M ++
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMF 636
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+ +HY+CM+D+LGRAG L +A +++ MP N S+WGALL A R+H G++A
Sbjct: 637 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLA 696
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A LF LEPE +G VL++N YA++ W EV K+R+ MK+ +KK A S IE +
Sbjct: 697 AEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHT 756
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F D+ +P KE+Y K+ + + AG++P++ LHD++ ++E +L++HSE+LAVA
Sbjct: 757 FIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVA 816
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
F +++ P A ++V KNLR+C DCH AF+FIS I R+II+RD NRFHHF GTCSC DY
Sbjct: 817 FALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDY 876
Query: 680 W 680
W
Sbjct: 877 W 877
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 235/506 (46%), Gaps = 16/506 (3%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ +G + + ++ Y +G + AR +FN ++++ + WN ++ AY
Sbjct: 121 QVHAMAMATGF-GSDVFVANALVAMYGGFGFMDDARRVFNEADSERN-AVSWNGLMSAYV 178
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
N C + ++++ M SGI + F V+ AC + I G+ VH ++R G+ D +
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
ALVDMY K G+ D +F++M D+VSW +I+ A+ L + + G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L+ + T+ S+ A G + +HG+ I D I +V MYA+ ++ AR
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VFD M RDLI N++++G G+ EAL LF E++ N T ++ + L
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ R+ H + DA + N ++D Y KC L A +F + S ++ + +
Sbjct: 419 AASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEEC--SSGDIIACTSM 476
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I HG A++ F +ML +G++PD +S+L+AC+ ++G++ A + K
Sbjct: 477 ITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 536
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLF 504
+ +V + G + +A +P S W A++ LA HG+ A
Sbjct: 537 MSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGHGKRALELFG 595
Query: 505 QL-----EPEHTGYFVLMSNIYAASN 525
++ P H + M+++ A N
Sbjct: 596 RMVDEGINPNH----ITMTSVLCACN 617
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 222/444 (50%), Gaps = 11/444 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+H+SL SG + +I Y+ P AR +F+ I + S W++++ AY+
Sbjct: 25 HLHASLLKSGSLAS---FRNHLISFYSKCRRPCCARRVFDEIPDPCHVS--WSSLVTAYS 79
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NNG ++ + MR G+ N + P VLK C ++ + G VH + TGF SD +
Sbjct: 80 NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GAQVHAMAMATGFGSDVF 136
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V ALV MY G DD +VF+E S R+ VSW +++AY + ++ +A+ +F +
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ V +A ++ + VH + + +D+ N++V MY + G V+ A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA 256
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
++F+ M D++SWN++++G + NG A+ L +M+ S PN T ++ AC+
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G+ LGR+ HG++I +N D + ++DMYAK LD A +F+ + R++ N
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF--HRDLILCNA 374
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
LI+G G +AL F ++ +EG+ + T ++L + + R+ A K+
Sbjct: 375 LISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIG 434
Query: 446 VKPEVKHYACMVDMLGRAGCLYEA 469
+ ++D + CL +A
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDA 458
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 184/365 (50%), Gaps = 18/365 (4%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
MR +G S T A+ +L G +H ++++G L+ + L+ Y+KC +
Sbjct: 1 MRSAGTISQQLT------RYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRR 52
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
+VFDE+ VSW+ ++TAY P A+ F + EG+ + + V
Sbjct: 53 PCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC 112
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRDLIS 279
V D VH A+ F D+ + N++VAMY G ++ AR VF+ + +R+ +S
Sbjct: 113 V---PDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVS 169
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL--GRKFHGY 337
WN +++ Y++N Q +A+ +F EM S +P +V+ACT GSR + GR+ H
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACT--GSRNIEAGRQVHAM 227
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
++ D NA++DMY K G +D A +F + S+ V SWN LI+G ++GH
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD--VVSWNALISGCVLNGHDH 285
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
+A+E QM G+ P+ T +SIL ACS AG D GR+ M K + + +V
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345
Query: 458 DMLGR 462
DM +
Sbjct: 346 DMYAK 350
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/661 (38%), Positives = 380/661 (57%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H+ + G A ++ Y G + A +F + + S WN +I
Sbjct: 222 RQVHAMVVRMGYDKDVFTANA-LVDMYMKMGRVDIASVIFEKMPDSDVVS--WNALISGC 278
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NGH +EL M+ SG+ N +T +LKAC+ G+ +HG +I+ SD
Sbjct: 279 VLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDD 338
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
Y+ LVDMYAK DD KVFD M RDL+ +I+ + +EAL LF + ++E
Sbjct: 339 YIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKE 398
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
GL + T+ +V + L + VH A+ F+ D + N ++ Y +C + A
Sbjct: 399 GLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDA 458
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ D+I+ SM+T Q A+ LF EM +P+P L++AC L
Sbjct: 459 NRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASL 518
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H ++I DA NA++ YAKCG ++ AE F+ + ER V SW+
Sbjct: 519 SAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL--PERGVVSWSA 576
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I G HGHG++ALE F +M++EG+ P+HIT TS+L AC+HAGL+DE ++ F M ++
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMF 636
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+ +HY+CM+D+LGRAG L +A +++ MP N S+WGALL A R+H G++A
Sbjct: 637 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLA 696
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A LF LEPE +G VL++N YA++ W EV K+R+ MK+ +KK A S IE +
Sbjct: 697 AEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHT 756
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F D+ +P KE+Y K+ + + AG++P++ LHD++ ++E +L++HSE+LAVA
Sbjct: 757 FIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVA 816
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
F +++ P A ++V KNLR+C DCH AF+FIS I R+II+RD NRFHHF GTCSC DY
Sbjct: 817 FALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDY 876
Query: 680 W 680
W
Sbjct: 877 W 877
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 235/506 (46%), Gaps = 16/506 (3%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ +G + + ++ Y +G + AR +FN ++++ + WN ++ AY
Sbjct: 121 QVHAMAMATGF-GSDVFVANALVAMYGGFGFMDDARRVFNEADSERN-AVSWNGLMSAYV 178
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
N C + ++++ M SGI + F V+ AC + I G+ VH ++R G+ D +
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
ALVDMY K G+ D +F++M D+VSW +I+ A+ L + + G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L+ + T+ S+ A G + +HG+ I D I +V MYA+ ++ AR
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VFD M RDLI N++++G G+ EAL LF E++ N T ++ + L
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ R+ H + DA + N ++D Y KC L A +F + S ++ + +
Sbjct: 419 AASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEEC--SSGDIIACTSM 476
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I HG A++ F +ML +G++PD +S+L+AC+ ++G++ A + K
Sbjct: 477 ITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 536
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLF 504
+ +V + G + +A +P S W A++ LA HG+ A
Sbjct: 537 MSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAMIGGLAQHGHGKRALELFG 595
Query: 505 QL-----EPEHTGYFVLMSNIYAASN 525
++ P H + M+++ A N
Sbjct: 596 RMVDEGINPNH----ITMTSVLCACN 617
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 221/444 (49%), Gaps = 11/444 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+H+SL SG + +I Y+ P AR F+ I + S W++++ AY+
Sbjct: 25 HLHASLLKSGSLAS---FRNHLISFYSKCRRPCCARRFFDEIPDPCHVS--WSSLVTAYS 79
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NNG ++ + MR G+ N + P VLK C ++ + G VH + TGF SD +
Sbjct: 80 NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GAQVHAMAMATGFGSDVF 136
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V ALV MY G DD +VF+E S R+ VSW +++AY + ++ +A+ +F +
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ V +A ++ + VH + + +D+ N++V MY + G V+ A
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIA 256
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
++F+ M D++SWN++++G + NG A+ L +M+ S PN T ++ AC+
Sbjct: 257 SVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G+ LGR+ HG++I +N D + ++DMYAK LD A +F+ + R++ N
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF--HRDLILCNA 374
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
LI+G G +AL F ++ +EG+ + T ++L + + R+ A K+
Sbjct: 375 LISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIG 434
Query: 446 VKPEVKHYACMVDMLGRAGCLYEA 469
+ ++D + CL +A
Sbjct: 435 FIFDAHVVNGLIDSYWKCSCLSDA 458
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 183/365 (50%), Gaps = 18/365 (4%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
MR +G S T A+ +L G +H ++++G L+ + L+ Y+KC +
Sbjct: 1 MRSAGTISQQLT------RYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRR 52
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
+ FDE+ VSW+ ++TAY P A+ F + EG+ + + V
Sbjct: 53 PCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC 112
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRDLIS 279
V D VH A+ F D+ + N++VAMY G ++ AR VF+ + +R+ +S
Sbjct: 113 V---PDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVS 169
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL--GRKFHGY 337
WN +++ Y++N Q +A+ +F EM S +P +V+ACT GSR + GR+ H
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACT--GSRNIEAGRQVHAM 227
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
++ D NA++DMY K G +D A +F + S+ V SWN LI+G ++GH
Sbjct: 228 VVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD--VVSWNALISGCVLNGHDH 285
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
+A+E QM G+ P+ T +SIL ACS AG D GR+ M K + + +V
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345
Query: 458 DMLGR 462
DM +
Sbjct: 346 DMYAK 350
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/676 (38%), Positives = 407/676 (60%), Gaps = 25/676 (3%)
Query: 15 LLKSCNFLASLRQIHSSLTT--SGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
L C L L+Q+H+ + T + + + + T+ A+++F+ + N
Sbjct: 102 LFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLA--YAKTIFHHLQNPP 159
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
L+N++IRA +++ +E L LY TM +SG+ + T+PFV+KAC +S+ G +V
Sbjct: 160 PS--LYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLV 217
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H ++++GF DSY+ ++L+ +YA ++F+ S RD+VSW MI Y + +
Sbjct: 218 HTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEM 277
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNS 251
A ++F + ++S + T+++ + VG++ + + + + E +L NS
Sbjct: 278 GHARMVFDRMVCRDVISWN-TMINGYAIVGKIDEAKR--------LFDEMPERNLVSWNS 328
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++A + +CGNVE A +F M RD++SWNSML Y Q G+ +EAL LFD+M+ KP
Sbjct: 329 MLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPT 388
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + L+SAC +LG+ G H YI ++ +++++ + A++DMYAKCG + A +FN
Sbjct: 389 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 448
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ++V +WN +IAG +HG+ ++A + F +M E GV+P+ ITF +ILSACSHAG++
Sbjct: 449 AM--ESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMV 506
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
DEG+K M+ ++P+V+HY C++D+L RAG L EA ++I MP+ PN S GALL
Sbjct: 507 DEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLG 566
Query: 491 ACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
CRIHG E+ L L+P H+G ++L+SNIYAA+ KW + K+R MK G+ K
Sbjct: 567 GCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKV 626
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA-GYMPDLSCALHDVEDED 604
SVIE + F D +P ++Y+K+ + +K A GY D L D+E+ED
Sbjct: 627 PGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEED 686
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+EH L HSEKLA+A+G+++L + +++ KNLRVC DCH + IS +Y R+IIVRD N
Sbjct: 687 KEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRN 746
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHFE G CSC D+W
Sbjct: 747 RFHHFEDGECSCLDFW 762
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 186/396 (46%), Gaps = 34/396 (8%)
Query: 12 YDQLLKSCN-----FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
Y ++K+CN + L +H+ + SG + ++ + +I Y + A+ LFN
Sbjct: 198 YPFVIKACNESSVTWFGLL--VHTHVVKSGFECDS-YIVSSLIHLYANGKDLGAAKQLFN 254
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
S WN MI Y + ++ M V + S + +
Sbjct: 255 LCSARDVVS--WNAMIDGYVKHVEMGHARMVFDRM--------------VCRDVISWNTM 298
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDM------YAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ G + G I L D + LV + KCG +D +F EM RD+VSW
Sbjct: 299 INGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWN 358
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
M+ Y Q KP EAL LF + + G+ T+VS+ SA LG + K +H Y N
Sbjct: 359 SMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDN 418
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ + ++V MYA+CG + A VF+ ME +D+++WN+++ G +G EA LF
Sbjct: 419 RIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLF 478
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYA 358
EM+ + +PN +T + ++SAC++ G G+K ++S+ I+ + + V+D+ A
Sbjct: 479 KEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD-CMSSSYGIEPKVEHYGCVIDLLA 537
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
+ G L+ A + + P E N S+ L+ G +HG
Sbjct: 538 RAGFLEEAMELIGTM-PMEPNPSALGALLGGCRIHG 572
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/683 (36%), Positives = 395/683 (57%), Gaps = 45/683 (6%)
Query: 39 NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY 98
N HLG +++ G+ A+ LF++I + +T+I A+ G E + LY
Sbjct: 63 NIPSHLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTC--STLISAFTTRGLPNEAIRLY 120
Query: 99 STMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC 158
+++R GI ++ F V KAC ++ K VH D IR G +SD+++ AL+ Y KC
Sbjct: 121 ASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKC 180
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
+ +VFD++ V+D+VSWT M + Y P L +F + G+ +SVT+ S+
Sbjct: 181 KCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSIL 240
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
A +L D+ +A+HG+A+ + +E++ + +++V++YARC +V++ARLVFD+M RD++
Sbjct: 241 PACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVV 300
Query: 279 SWNSMLTGY-----------------------------------IQNGQASEALLLFDEM 303
SWN +LT Y ++NGQ +A+ + +M
Sbjct: 301 SWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKM 360
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
QN KPN +T + AC+ L S ++G++ H Y+ + D T A++ MYAKCGDL
Sbjct: 361 QNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDL 420
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ + N+F+ I ++V +WN +I MHG+GR+ L F ML+ G+KP+ +TFT +LS
Sbjct: 421 NLSRNVFDMI--CRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLS 478
Query: 424 ACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
CSH+ L++EG + F M + V+P+ HYACMVD+ RAG L+EA++ I++MP+ P
Sbjct: 479 GCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTA 538
Query: 483 SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
S WGALL ACR++ +I+AN LF++EP + G +V + NI + W E + R M
Sbjct: 539 SAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILM 598
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
K +G+ K S ++ G + F D+ N ++Y ++ + ++K AGY PD L
Sbjct: 599 KERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVL 658
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
D++ E++ L HSEKLAVAFGI+NL ++ ++V KNLR+C DCH+A +++S +
Sbjct: 659 QDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVT 718
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
IIVRD+ RFHHF G CSC D W
Sbjct: 719 IIVRDSLRFHHFRNGNCSCQDLW 741
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/610 (39%), Positives = 369/610 (60%), Gaps = 9/610 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
+N +IR++ GH + L L+ M + +S + +T +K+C+ + G+ V
Sbjct: 138 YNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYA 197
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ GF+ D +V +L+ MYA CG +F + V+ +++W MI Y + +E +
Sbjct: 198 FKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVV 257
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+F+ + D VT++SVA+A G+LGD Q + YA L + ++V MY
Sbjct: 258 EMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMY 317
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+CG ++KAR +FD M RD+++W++M++GY Q+ + EAL +F+EMQ ++ PN VT +
Sbjct: 318 AKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMV 377
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++SAC LG+ + G+ H YI ++ + L A++D YAKCG + A F +
Sbjct: 378 SVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESM--P 435
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
RN +W LI G +G R+ALE FS MLE ++P +TF +L ACSH L++EGR+
Sbjct: 436 VRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRR 495
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F MT+ + P ++HY CMVD+LGRAG + EA+ I+ MP+ PN VW ALL AC +H
Sbjct: 496 HFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVH 555
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
GE A + L+P H+G ++L+SN YA+ +W+ +R++MK KG++K S+
Sbjct: 556 KNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSL 615
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
IE I F D +P E+Y+KV M IKM GY+P+ + A DV++ +++ ++
Sbjct: 616 IELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVS 675
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
+HSEKLA+AFG+M P A ++++KNLRVC DCHSA + IS +Y R+IIVRD NRFHHF+
Sbjct: 676 HHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFK 735
Query: 671 GGTCSCNDYW 680
G CSCNDYW
Sbjct: 736 DGLCSCNDYW 745
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/639 (39%), Positives = 391/639 (61%), Gaps = 11/639 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y GE ++A LF+ + + S WN+MI NG LE + M +
Sbjct: 594 LIATYFKSGEVDSAHKLFDELGDRDVVS--WNSMISGCVMNGFSHSALEFFVQMLILRVG 651
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ T + ACA+ + G+ +HG ++ F + L+DMY+KCG +D +
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F++M + +VSWT +I AY + ++A+ LF + + +G+ D ++ SV A +
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
K + VH Y N L + N+++ MYA+CG++E+A LVF + +D++SWN+M+ GY
Sbjct: 772 DKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGY 831
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
+N +EAL LF EMQ + +P+ +T L+ AC L + ++GR HG I+ + +
Sbjct: 832 SKNSLPNEALKLFAEMQK-ESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSEL 890
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ NA++DMY KCG L A +F D+ P E+++ +W V+I+G GMHG G +A+ F +M
Sbjct: 891 HVANALIDMYVKCGSLVHARLLF-DMIP-EKDLITWTVMISGCGMHGLGNEAIATFQKMR 948
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCL 466
G+KPD ITFTSIL ACSH+GL++EG F M ++ +++P+++HYACMVD+L R G L
Sbjct: 949 IAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNL 1008
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIY 521
+A+++I+ MP+ P+ ++WGALL CRIH E A ++F+LEP++ GY+VL++NIY
Sbjct: 1009 SKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIY 1068
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A + KW EV KLRE + +GLKK S IE F +AD +P K ++ + ++
Sbjct: 1069 AEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLR 1128
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
+++K G+ P + AL + D ++E L HSEKLA+AFGI+NL ++V KNLRVC+
Sbjct: 1129 IKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCD 1188
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH +F+S RR+II+RD+NRFHHF+ G CSC D+W
Sbjct: 1189 DCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 258/492 (52%), Gaps = 17/492 (3%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+ C L + +HS ++++G+ + + LGAK++ Y + G R +F+ I
Sbjct: 454 YSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGV-LGAKLVFMYVSCGALREGRRIFDHI 512
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+D FLWN M+ YA G E++ L+ M++ GI+ NSYTF +LK A+ + E
Sbjct: 513 LSDNKV-FLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGE 571
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
K +HG + + GF S + V +L+ Y K G+ D K+FDE+ RD+VSW MI+
Sbjct: 572 CKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVM 631
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
AL F + + D T+V+ +A +G + +A+HG + F ++
Sbjct: 632 NGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMF 691
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
N+++ MY++CGN+ A F+ M ++ ++SW S++ Y++ G +A+ LF EM++
Sbjct: 692 NNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGV 751
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
P+ + ++ AC S GR H YI +NM + + NA+MDMYAKCG ++ A
Sbjct: 752 SPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYL 811
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+ I +++ SWN +I GY + +AL+ F++M +E +PD IT +L AC
Sbjct: 812 VFSQI--PVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSL 868
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV- 484
++ GR + + E+ ++DM + G L A FDMI P D +
Sbjct: 869 AALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMI-----PEKDLIT 923
Query: 485 WGALLLACRIHG 496
W ++ C +HG
Sbjct: 924 WTVMISGCGMHG 935
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/680 (39%), Positives = 398/680 (58%), Gaps = 17/680 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +LK+C+ L ++ +IHS GL + + ++ Y G A+ LF+S+
Sbjct: 112 YPFVLKACSGLLAIEDGVEIHSHAKMFGL-ESDVFVCTALVDFYAKCGILVEAQRLFSSM 170
Query: 69 -HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
H D WN MI + G C + ++L M+ GI NS T VL +
Sbjct: 171 SHRD---VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALG 227
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
GK +HG +R F + V L+DMYAKC K+FD M VR+ VSW+ MI Y
Sbjct: 228 HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV 287
Query: 188 QAEKPEEALILF-QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
++ +EAL LF Q ++ + VT+ SV A +L D+ + + +H Y I + D+
Sbjct: 288 ASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDI 347
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N++++MYA+CG ++ A FD M +D +S++++++G +QNG A+ AL +F MQ S
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
P+ T L ++ AC++L + Q G HGY+I D + NA++DMY+KCG + A
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+FN + ++ SWN +I GYG+HG G +AL F +L G+KPD ITF +LS+CS
Sbjct: 468 REVFNRM--DRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 525
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL+ EGR F M++ S+ P ++H CMVD+LGRAG + EA I+ MP P+ +W
Sbjct: 526 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 585
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
ALL ACRIH GE + + L PE TG FVL+SNIY+A+ +W + +R K+
Sbjct: 586 SALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDW 645
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
GLKK S IE + F D+ + ++ +K+E + VE+K GY + S DV
Sbjct: 646 GLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDV 705
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E+E++E +L YHSEKLA+AFGI+NL + VTKNLRVC DCH+A +F++ I +R+I V
Sbjct: 706 EEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITV 765
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RDANRFHHF+ GTC+C D+W
Sbjct: 766 RDANRFHHFKNGTCNCGDFW 785
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 265/522 (50%), Gaps = 23/522 (4%)
Query: 12 YDQLLKSC---NFLASLRQIHSSL--TTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
Y LL++C L ++IH TS + LH K+ Y + + AR LF+
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLH---KLTRLYLSCNQVVLARRLFD 67
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
I N LWN +IRAYA NG ++LY +M G+ N YT+PFVLKAC+ I
Sbjct: 68 EIPNPSV--ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+G +H G SD +V ALVD YAKCG + ++F MS RD+V+W MI
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
++A+ L + Q+EG+ +S TIV V VG+ + +A+HGY + +F +
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGV 245
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ ++ MYA+C + AR +FD+M R+ +SW++M+ GY+ + EAL LFD+M
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILK 305
Query: 307 DC-KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
D P PVT ++ AC L GRK H YII +D L N ++ MYAKCG +D
Sbjct: 306 DAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDD 365
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A F++++P ++ S++ +++G +G+ AL F M G+ PD T +L AC
Sbjct: 366 AIRFFDEMNP--KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPAC 423
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV- 484
SH + G + + ++DM + G + A ++ +M +D V
Sbjct: 424 SHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRM--DRHDIVS 481
Query: 485 WGALLLACRIHG-EIAANYLFQ------LEPEHTGYFVLMSN 519
W A+++ IHG + A LF L+P+ + L+S+
Sbjct: 482 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 523
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/661 (38%), Positives = 381/661 (57%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH L G + A A ++ Y G A S+F+ I S WN +I
Sbjct: 131 RKIHGYLIKLGYDSDAFSANA-LVDMYAKVGILEDASSVFDEIAKPDIVS--WNAIIAGC 187
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ + LEL M +SG+ N +T LKACA +L G+ +H +I+ SDS
Sbjct: 188 VLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDS 247
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ L+DMY+KC DD VF M RD+++W +I+ + Q E+ EEA LF E
Sbjct: 248 FLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTE 307
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + T+ +V ++ L + +H ++ + F D + NS++ Y +CG+VE A
Sbjct: 308 GIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDA 367
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ DL+ + S++T Y Q+GQ EAL L+ EMQ+ KP+ L++AC L
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASL 427
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H +I+ D N++++MYAKCG ++ A F+ I R + SW+
Sbjct: 428 SAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRI--PVRGIVSWSA 485
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I G HG+G++AL+ F QML+ GV P+HIT S+L AC+HAGL+ E + F M L
Sbjct: 486 MIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILF 545
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
++P +HYACM+D+LGRAG L A +++ +MP N VWGALL A RIH GE A
Sbjct: 546 GIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQA 605
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A L LEPE +G VL++NIYA+ W +V ++R MK+ +KK S +E +
Sbjct: 606 AEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYT 665
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F DR + E+Y K++ ++ +K AGY+P + LHDVE ++E +L +HSEKLAVA
Sbjct: 666 FIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVA 725
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG++ P A ++V KNLR+C DCH+ +FIS I R+IIVRD NRFHHF G+CSC +Y
Sbjct: 726 FGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEY 785
Query: 680 W 680
W
Sbjct: 786 W 786
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 200/382 (52%), Gaps = 10/382 (2%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M GI N + FP VLKAC ++ GK VHG ++ TGF SD +V +LV +YAKCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
D +FD + R +VSW + + Y ++ EA+ LF G+ + ++ S+ +
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
L D ++ + +HGY I + D N++V MYA+ G +E A VFD + K D++SW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N+++ G + + AL L EM S PN T + AC + R+LGR+ H +I
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+M D+ L ++DMY+KC +D A +F + P ER++ +WN +I+G+ + +A
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFK-LMP-ERDMIAWNAVISGHSQNEEDEEAA 298
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP--EVKHYAC--M 456
F M EG+ + T +++L + + + C + LS+K E +Y +
Sbjct: 299 SLFPLMHTEGIGFNQTTLSTVLKSIA---ALQANYMC-RQIHALSLKSGFEFDNYVVNSL 354
Query: 457 VDMLGRAGCLYEAFDMIKQMPL 478
+D G+ G + +A + ++ P+
Sbjct: 355 IDTYGKCGHVEDATRVFEESPI 376
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 272/739 (36%), Positives = 420/739 (56%), Gaps = 62/739 (8%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M+RLG + + + +LK+C + S R +H+ + SG + +G ++ Y G
Sbjct: 117 MQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGF-EWNVFVGNGLVSMYGRCG 175
Query: 57 EPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFP 114
AR +F+ + + WN+++ AY G + ++++ M GI ++ +
Sbjct: 176 AWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLV 235
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
VL ACAS GK VHG +R+G D +V A+VDMYAKCG ++ KVF+ M V+
Sbjct: 236 NVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK 295
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQE----------------------------- 205
D+VSW M+T Y Q + ++AL LF+K ++E
Sbjct: 296 DVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVF 355
Query: 206 ------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC-------NAFLEDLCIQNSI 252
G + VT+VS+ S G +L + H +AI N +DL + N++
Sbjct: 356 RQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINAL 415
Query: 253 VAMYARCGNVEKARLVFDMMEKRD--LISWNSMLTGYIQNGQASEALLLFDEMQNSD--C 308
+ MY++C + + AR +FD++ +D +++W ++ G Q+G+A+EAL LF +M D
Sbjct: 416 IDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFV 475
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT-LRNAVMDMYAKCGDLDTAE 367
PN T + AC LG+ + GR+ H Y++ + + + N ++DMY+K GD+D A
Sbjct: 476 MPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAAR 535
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+++H +RN SW L+ GYGMHG G +AL+ F +M + G+ PD +TF +L ACSH
Sbjct: 536 VVFDNMH--QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSH 593
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+G++D+G F M K V P +HYACMVD+L RAG L EA ++I+ MP+ P +VW
Sbjct: 594 SGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWV 653
Query: 487 ALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
ALL ACR++ GE AAN L +LE + G + L+SNIYA + W++V ++R MKN G
Sbjct: 654 ALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTG 713
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+KK S ++ K F D +P +++Y + + IK GY+PD ALHDV+
Sbjct: 714 IKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVD 773
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
DE++ +L+ HSEKLA+A+GI+ P A +++TKNLR C DCHSAF +IS I +IIVR
Sbjct: 774 DEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVR 833
Query: 662 DANRFHHFEGGTCSCNDYW 680
D++RFHHF+ G+CSC YW
Sbjct: 834 DSSRFHHFKNGSCSCRGYW 852
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 269/543 (49%), Gaps = 60/543 (11%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
ST L C LAS IH L GL + H II Y T+ P A S+
Sbjct: 27 STTDLTSTLFHQCKSLASAELIHQQLLVQGLPHDPTH----IISMYLTFNSPAKALSVLR 82
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+H F WN +IR + G + L+LY M+R G + YTFPFVLKAC
Sbjct: 83 RLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSF 142
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR---DLVSWTVMI 183
G VH + +GF + +V LV MY +CG ++ +VFDEM R DLVSW ++
Sbjct: 143 RCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIV 202
Query: 184 TAYEQAEKPEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
AY Q A+ +F++ T+ G+ D+V++V+V A +G + + VHGYA+ +
Sbjct: 203 AAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGL 262
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD- 301
ED+ + N++V MYA+CG +E+A VF+ M+ +D++SWN+M+TGY Q G+ +AL LF+
Sbjct: 263 FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEK 322
Query: 302 ----------------------------------EMQNSDCKPNPVTALILVSACTYLGS 327
+M+ +PN VT + L+S C G+
Sbjct: 323 IREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGT 382
Query: 328 RQLGRKFHGYIINSNMKIDAT-------LRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
G++ H + I + +D + NA++DMY+KC A MF+ I P +R+V
Sbjct: 383 LLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSV 442
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEG--VKPDHITFTSILSACSHAGLIDEGRKCF 438
+W VLI G HG +ALE FSQML+ V P+ T + L AC+ G + GR+
Sbjct: 443 VTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIH 502
Query: 439 ADMTKLSVKPEVKHYA-CMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRI 494
A + + + + A C++DM ++G + A FD + Q N W +L+ +
Sbjct: 503 AYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQR----NGVSWTSLMTGYGM 558
Query: 495 HGE 497
HG
Sbjct: 559 HGR 561
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/671 (38%), Positives = 395/671 (58%), Gaps = 16/671 (2%)
Query: 22 LASLRQIHSSLTTSGLI-----NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
+SLR +H G I + +G ++ Y ++AR +F+ + S
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS- 263
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN++I Y +NG + L ++ M SGI + T V CA + LI G+ VH
Sbjct: 264 -WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++ F + L+DMY+KCG D VF EMS R +VS+T MI Y + EA+
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF++ ++EG+ D T+ +V + + + + + VH + N D+ + N+++ MY
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTA 315
A+CG++++A LVF M +D+ISWN+++ GY +N A+EAL LF+ + + P+ T
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++ AC L + GR+ HGYI+ + D + N+++DMYAKCG L A +F+DI
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI-- 560
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+ +++ SW V+IAGYGMHG G++A+ F+QM + G++ D I+F S+L ACSH+GL+DEG
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 436 KCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F M + ++P V+HYAC+VDML R G L +A+ I+ MP+PP+ ++WGALL CRI
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H E A +F+LEPE+TGY+VLM+NIYA + KW +V +LR+ + +GL+K S
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE + F D NP + + + + + GY P AL D E+ ++E L
Sbjct: 741 WIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEAL 800
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+A GI++ +++VTKNLRVC DCH +F+S + RR+I++RD+NRFH F
Sbjct: 801 CGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQF 860
Query: 670 EGGTCSCNDYW 680
+ G CSC +W
Sbjct: 861 KDGHCSCRGFW 871
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 251/497 (50%), Gaps = 13/497 (2%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
+ P T QL L +++ + + +G + + +LG+K+ + YT G+ A
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDS-NLGSKLSLMYTNCGDLKEASR 150
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+ + +K+ WN ++ A +G ++ L+ M SG+ +SYTF V K+ +S
Sbjct: 151 VFDEVKIEKA--LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ G+ +HG I+++GF + V +LV Y K + D KVFDEM+ RD++SW +I
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
Y E+ L +F + G+ D TIVSV + + +AVH + F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ N+++ MY++CG+++ A+ VF M R ++S+ SM+ GY + G A EA+ LF+EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ P+ T +++ C G++ H +I +++ D + NA+MDMYAKCG +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSIL 422
AE +F+++ +++ SWN +I GY + + +AL F+ +LEE PD T +L
Sbjct: 449 QEAELVFSEMRV--KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLP 479
AC+ D+GR+ + + + +VDM + G L A FD I L
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 480 PNDSVWGALLLACRIHG 496
W ++ +HG
Sbjct: 567 S----WTVMIAGYGMHG 579
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 211/398 (53%), Gaps = 4/398 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
NT +R + +G+ ++L + I + T VL+ CA + + +GK V I
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF+ DS + + L MY CG + +VFDE+ + + W +++ ++ ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F+K G+ DS T V+ + L V + +HG+ + + F E + NS+VA Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
V+ AR VFD M +RD+ISWNS++ GY+ NG A + L +F +M S + + T + +
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ C LGR H + + + N ++DMY+KCGDLD+A+ +F ++ S+R
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM--SDR 360
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V S+ +IAGY G +A++ F +M EEG+ PD T T++L+ C+ L+DEG++
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ + + ++ ++DM + G + EA + +M
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 255/671 (38%), Positives = 395/671 (58%), Gaps = 16/671 (2%)
Query: 22 LASLRQIHSSLTTSGLI-----NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
+SLR +H G I + +G ++ Y ++AR +F+ + S
Sbjct: 54 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS- 112
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN++I Y +NG + L ++ M SGI + T V CA + LI G+ VH
Sbjct: 113 -WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 171
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++ F + L+DMY+KCG D VF EMS R +VS+T MI Y + EA+
Sbjct: 172 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 231
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF++ ++EG+ D T+ +V + + + + + VH + N D+ + N+++ MY
Sbjct: 232 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 291
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTA 315
A+CG++++A LVF M +D+ISWN+++ GY +N A+EAL LF+ + + P+ T
Sbjct: 292 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 351
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++ AC L + GR+ HGYI+ + D + N+++DMYAKCG L A +F+DI
Sbjct: 352 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI-- 409
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+ +++ SW V+IAGYGMHG G++A+ F+QM + G++ D I+F S+L ACSH+GL+DEG
Sbjct: 410 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 469
Query: 436 KCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F M + ++P V+HYAC+VDML R G L +A+ I+ MP+PP+ ++WGALL CRI
Sbjct: 470 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 529
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H E A +F+LEPE+TGY+VLM+NIYA + KW +V +LR+ + +GL+K S
Sbjct: 530 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 589
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE + F D NP + + + + + GY P AL D E+ ++E L
Sbjct: 590 WIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEAL 649
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+A GI++ +++VTKNLRVC DCH +F+S + RR+I++RD+NRFH F
Sbjct: 650 CGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQF 709
Query: 670 EGGTCSCNDYW 680
+ G CSC +W
Sbjct: 710 KDGHCSCRGFW 720
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 223/436 (51%), Gaps = 12/436 (2%)
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + +K+ WN ++ A +G ++ L+ M SG+ +SYTF V K+ +S
Sbjct: 1 FDEVKIEKA--LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 58
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ G+ +HG I+++GF + V +LV Y K + D KVFDEM+ RD++SW +I
Sbjct: 59 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 118
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Y E+ L +F + G+ D TIVSV + + +AVH + F
Sbjct: 119 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 178
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ N+++ MY++CG+++ A+ VF M R ++S+ SM+ GY + G A EA+ LF+EM+
Sbjct: 179 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 238
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
P+ T +++ C G++ H +I +++ D + NA+MDMYAKCG +
Sbjct: 239 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 298
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILS 423
AE +F+++ +++ SWN +I GY + + +AL F+ +LEE PD T +L
Sbjct: 299 EAELVFSEMRV--KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 356
Query: 424 ACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPP 480
AC+ D+GR+ + + + +VDM + G L A FD I L
Sbjct: 357 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 416
Query: 481 NDSVWGALLLACRIHG 496
W ++ +HG
Sbjct: 417 ----WTVMIAGYGMHG 428
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/651 (38%), Positives = 383/651 (58%), Gaps = 12/651 (1%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
+N+ L + +I Y+ + A+ LF+ NDK WN+MI YA T L
Sbjct: 235 LNEELMVNNSLIDMYSKCRFLSEAQLLFDK--NDKKNIVSWNSMIGGYAREEDVCRTFYL 292
Query: 98 YSTMRR--SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
M+ + + ++ +T VL C S + K +HG R G S+ V A + Y
Sbjct: 293 LQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAY 352
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
+CG +VFD M + + SW ++ Y Q P +AL L+ + GL D TI
Sbjct: 353 TRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIG 412
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
S+ A ++ + + +HG+A+ N D I S++++Y CG A+++FD ME R
Sbjct: 413 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR 472
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
L+SWN M+ GY QNG EA+ LF +M + +P + + + AC+ L + +LG++ H
Sbjct: 473 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELH 532
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ + +++ D + ++++DMYAK G + ++ +F+ + E++V+SWNV+IAGYG+HG
Sbjct: 533 CFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR--EKDVASWNVIIAGYGIHGR 590
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYA 454
G++ALE F +ML G+KPD TFT IL ACSHAGL+++G + F M L +++P+++HY
Sbjct: 591 GKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYT 650
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPE 509
C+VDMLGRAG + +A +I++MP P+ +W +LL +CRIHG E AN L +LEPE
Sbjct: 651 CVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPE 710
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
+VL+SN++A S KW +V ++R MK+ GL+K A S IE G + F D + P
Sbjct: 711 KPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPE 770
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
+EV + + V+I GY PD LHD+E+ED+ +L HSEKLA++FG++N
Sbjct: 771 LEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGL 830
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V+V KNLR+C DCH+A +FIS + R I+VRD RFHHF G CSC DYW
Sbjct: 831 PVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 230/444 (51%), Gaps = 14/444 (3%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++C + R++H ++ S L +II Y+ G P+ +R +F+ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR-- 61
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGK 130
+ F WN ++ AY N + + ++S + + +++T P V+KACA + G+
Sbjct: 62 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
++HG + +SD +V AL+ MY KCG ++ KVF+ M R+LVSW +I + +
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181
Query: 191 KPEEALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+E+ F++ +E + D T+V+V D+ K AVHG A+ E+L +
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
NS++ MY++C + +A+L+FD +K++++SWNSM+ GY + L +MQ D
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDA 301
Query: 309 --KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
K + T L ++ C Q ++ HGY ++ + + NA + Y +CG L ++
Sbjct: 302 KMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSS 361
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
E +F+ + + VSSWN L+ GY + RKAL+ + QM + G+ PD T S+L ACS
Sbjct: 362 ERVFDLM--DTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 419
Query: 427 HAGLIDEGRKC--FADMTKLSVKP 448
+ G + FA L+V P
Sbjct: 420 RMKSLHYGEEIHGFALRNGLAVDP 443
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+L+ AC ++GR+ H + S D L ++ MY+ CG + +F+ +
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR- 61
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV-KPDHITFTSILSACSHAGLID-- 432
+N+ WN +++ Y + A+ FS+++ KPD+ T ++ AC AGL+D
Sbjct: 62 -RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLG 118
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
G+ TK+ + +V ++ M G+ G + EA + + MP
Sbjct: 119 LGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP 163
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/636 (40%), Positives = 370/636 (58%), Gaps = 12/636 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G P A ++F I S WN +I + L+L M ++ + +
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVS--WNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMF 290
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T LKACA+ L+ G+ +H +++ DS+V L+DMY+KCG D VFD M
Sbjct: 291 TLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV-ASAVGQLGDVLKA 230
+D++ W +I+ Y EA+ LF +EGL + T+ ++ S G +
Sbjct: 351 PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE 410
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
Q VH +I + + D + NS++ Y +C +E A VF++ DL+++ SM+T Y Q
Sbjct: 411 Q-VHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G EAL ++ MQ+ D KP+ L +AC L + + G++ H +++ + D
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG 529
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N++++MYAKCG +D A +FN+I S R + SW+ +I G HGHGRKAL+ F QML+ G
Sbjct: 530 NSLVNMYAKCGSIDDASCIFNEI--SWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNG 587
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEA 469
+ P+HIT S+LSAC+HAGL+ E R+ F M KL + P +HYACMVD+LGR G L EA
Sbjct: 588 ILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEA 647
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAAS 524
++K+MP + +VWGALL A RIH G AA L LEPE +G +L++NIYA++
Sbjct: 648 MVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYAST 707
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
W V K+R MKN +KK S IE + F DR +P KE+Y K++ + +
Sbjct: 708 GMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERL 767
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
AGY+P + LHDVE ++E +L +HSEKLAVAFG++ P A ++V KNLRVC DCH
Sbjct: 768 TSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCH 827
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+AF+FIS + R+IIVRD NRFHHF G+CSC DYW
Sbjct: 828 TAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 207/420 (49%), Gaps = 5/420 (1%)
Query: 89 GHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQ 148
G + + L + M +GIS N ++ VL ACA G VHG +I+ G+ SD +
Sbjct: 167 GKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSA 226
Query: 149 AALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL 208
AL+DMYAK G + VF E+ D+VSW +I EK + AL L K +
Sbjct: 227 NALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVA 286
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
T+ S A +G V + +H + D + ++ MY++CG ++ AR+V
Sbjct: 287 PSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMV 346
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
FD+M +D+I WNS+++GY G EA+ LF M + N T ++ + +
Sbjct: 347 FDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQAN 406
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ H I S + D + N+++D Y KC L+ A +F ++ P+E ++ ++ +I
Sbjct: 407 GFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF-EVCPAE-DLVAYTSMIT 464
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
Y +G G +AL+ + +M + +KPD F+S+ +AC++ ++G++ + K +
Sbjct: 465 AYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLS 524
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLFQL 506
+V +V+M + G + +A + ++ S W A++ LA HG A +Q+
Sbjct: 525 DVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVS-WSAMIGGLAQHGHGRKALQLFYQM 583
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 45/354 (12%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
+P +L ++ + G +H IIR ++ LV++Y+KC K+ + S
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIRL---GLLGLRNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 173 VRDLVSWTVMITAYEQAEKPEEALI----------------------------------- 197
DLVSW+ +I+ Y Q + EEAL+
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 198 -----LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
L + G+ + ++ +V +A L D VHGY I + D N++
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ MYA+ G E A VF + K D++SWN+++ G + + + AL L +M + P+
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T + AC +G +LGR+ H ++ +M+ D+ + ++DMY+KCG L A +F D
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVF-D 348
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+ P ++V WN +I+GY G+ +A+ F+ M +EG++ + T ++IL + +
Sbjct: 349 LMPX-KDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTA 401
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 45/278 (16%)
Query: 253 VAMYARCGNVEKAR-LVFDMMEKRDLISWNSMLTGYIQNGQASEALL------------- 298
V +Y++C AR LV D E DL+SW+++++GY+QNG+ EALL
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEP-DLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGN 147
Query: 299 ---------------------------LFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
L EM ++ PN + +++AC L G
Sbjct: 148 EFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYG 207
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
K HGY+I D NA++DMYAK G + A +F +I + ++ SWN +IAG
Sbjct: 208 MKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEI--PKPDIVSWNAVIAGCV 265
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
+H AL+ +M V P T +S L AC+ GL+ GR+ + + K+ ++P+
Sbjct: 266 LHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSF 325
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++DM + G L +A + MP + VW +++
Sbjct: 326 VGVGLIDMYSKCGLLQDARMVFDLMPX-KDVIVWNSII 362
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/673 (38%), Positives = 391/673 (58%), Gaps = 16/673 (2%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+ S L ++++H +G I+ L +G +I Y G + AR +F+ + + S
Sbjct: 244 ITSTGALEWVKEVHKHAGKAGFISD-LRVGNALIHMYAKCGSIDDARLVFDGMCDRDVIS 302
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
WN MI A NG E ++ M++ G +S T+ +L S K VH
Sbjct: 303 --WNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+ G +SD V +A V MY +CG DD +FD+++VR++ +W MI Q + EA
Sbjct: 361 AVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREA 420
Query: 196 LILFQKTQQEGLLSDSVTIVSVASA-VGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIV 253
L LF + ++EG D+ T V++ SA VG+ + L+ + VH YAI +A L DL + N++V
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSANVGE--EALEWVKEVHSYAI-DAGLVDLRVGNALV 477
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
MYA+CGN A+ VFD M +R++ +W M++G Q+G EA LF +M P+
Sbjct: 478 HMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDAT 537
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T + ++SAC G+ + ++ H + +N+ + D + NA++ MYAKCG +D A +F+D+
Sbjct: 538 TYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM 597
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
ER+V SW V+I G HG G AL+ F +M EG KP+ +F ++LSACSHAGL+DE
Sbjct: 598 --LERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDE 655
Query: 434 GRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
GR+ F +T+ ++P ++HY CMVD+LGRAG L EA I MP+ P D+ WGALL AC
Sbjct: 656 GRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGAC 715
Query: 493 RIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
+G E AA +L+P+ +VL+SNIYAA+ W + +R M+ +G++K
Sbjct: 716 VTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPG 775
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S IE I F D +P KE+Y K++ + +K GY+PD L + + E +E
Sbjct: 776 RSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQ 835
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
L HSEKLA+ +G+M+ ++V KNLRVC+DCH+A +FIS + R+I+ RDA RFH
Sbjct: 836 ALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFH 895
Query: 668 HFEGGTCSCNDYW 680
HF+ G CSC DYW
Sbjct: 896 HFKDGVCSCGDYW 908
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 263/539 (48%), Gaps = 51/539 (9%)
Query: 2 RRLGPSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEP 58
R G E Y +LK+C SL+ +IH+ + SG + + ++ Y G
Sbjct: 23 REGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGF-QSDVRVETALVNMYVKCGSI 81
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
+ A+ +F+ + S W MI A+ G E + M+R G NSYT+ +L
Sbjct: 82 DDAQLIFDKMVERNVIS--WTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILN 139
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
A AS + K VH + G D V ALV MYAK G DD VFD M RD+ S
Sbjct: 140 ANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFS 199
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV--ASAVGQLGDVLKAQAVHGY 236
WTVMI Q + +EA LF + ++ G L + T +S+ ASA+ G + + VH +
Sbjct: 200 WTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKH 259
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
A F+ DL + N+++ MYA+CG+++ ARLVFD M RD+ISWN+M+ G QNG EA
Sbjct: 260 AGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEA 319
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
+F +MQ P+ T L L++ G+ + ++ H + + + D + +A + M
Sbjct: 320 FTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHM 379
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y +CG +D A+ +F+ + + RNV++WN +I G GR+AL F QM EG PD
Sbjct: 380 YIRCGSIDDAQLIFDKL--AVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDAT 437
Query: 417 TFTSILSA----------------CSHAGLID------------------EGRKCFADMT 442
TF +ILSA AGL+D ++ F DM
Sbjct: 438 TFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDM- 496
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM---PLPPNDSVWGALLLACRIHGEI 498
V+ V + M+ L + GC +EAF + QM + P+ + + ++L AC G +
Sbjct: 497 ---VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGAL 552
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 249/459 (54%), Gaps = 17/459 (3%)
Query: 81 MIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
MI YA G+ + +++YS MRR G N T+ +LKAC S + GK +H II++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F SD V+ ALV+MY KCG DD +FD+M R+++SWTVMI + +EA F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ Q+EG + +S T VS+ +A G + + VH +A+ DL + N++V MYA+ G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV- 319
+++ AR+VFD M +RD+ SW M+ G Q+G+ EA LF +M+ C PN T L ++
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 320 -SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
SA T G+ + ++ H + + D + NA++ MYAKCG +D A +F+ + +R
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM--CDR 298
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V SWN +I G +G G +A F +M +EG PD T+ S+L+ G + ++
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHG 496
++ + +++ + V M R G + +A + ++ + N + W A++ +A + G
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAV-RNVTTWNAMIGGVAQQKCG 417
Query: 497 EIAANYLFQLEPEHTGYF--------VLMSNIYAASNKW 527
A + Q+ E G+F +L +N+ + +W
Sbjct: 418 REALSLFLQMRRE--GFFPDATTFVNILSANVGEEALEW 454
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/620 (38%), Positives = 384/620 (61%), Gaps = 28/620 (4%)
Query: 78 WNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILE---GKVVH 133
WN+M+RA+ N+ L+ Y+ M RS + +TFP +LK CA L+LE GKV+H
Sbjct: 46 WNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA---LLLEFKVGKVLH 102
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G +++ SD Y++ L++MYA CG +F+ M R+ V WT MI+ Y + P
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY------AICNAFLEDLC 247
EAL+L++K +++G D VT+ ++ SA +L D+ +H + IC
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV------ 216
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-S 306
+ +++V MYA+CG+++ AR VFD + +D+ +W++++ GY++N +++EAL LF E+ S
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ +PN VT L ++SAC LG + GR H YI + +L N+++DM++KCGD+D A
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+ +F+ + S +++ SWN ++ G+ +HG GR+AL F M ++PD ITF +L+ACS
Sbjct: 337 KRIFDSM--SYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACS 394
Query: 427 HAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
HAGL+ EG+K F ++ L V+ + +HY CMVD+L RAG L EA + I+ MPL P+ ++W
Sbjct: 395 HAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIW 454
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
G++L ACR++ GE AA +L +LEP + G ++L+SNIYA W EV K+RE M K
Sbjct: 455 GSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEK 514
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G++K S + F D +P E+ + + ++K+AGY+ D S L ++
Sbjct: 515 GIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNI 574
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+D +E ++ HSEKLA+ +G++ + + KNLRVC+DCH+ + +S IY+R+I +
Sbjct: 575 DDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITL 634
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD NRFHHF+ G+CSC DYW
Sbjct: 635 RDRNRFHHFKDGSCSCRDYW 654
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 208/405 (51%), Gaps = 16/405 (3%)
Query: 12 YDQLLKSCNFLASLR--QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI- 68
+ LLK C L + ++ +++ L++ ++ Y G+ +AR LF +
Sbjct: 82 FPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMG 141
Query: 69 HNDKSYSFLWNTMIRAYANNGHCV-ETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
H +K +W +MI Y N HC E L LY M G S + T ++ ACA +
Sbjct: 142 HRNK---VVWTSMISGYMKN-HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLG 197
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +H I + + +ALV+MYAKCG +VFD++S +D+ +W+ +I Y
Sbjct: 198 VGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYV 257
Query: 188 QAEKPEEALILFQKTQ-QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ + EAL LF++ + + VTI++V SA QLGD+ + VH Y +
Sbjct: 258 KNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSV 317
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ NS++ M+++CG+++ A+ +FD M +DLISWNSM+ G+ +G EAL F MQ +
Sbjct: 318 SLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTT 377
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS--NMKIDATLRNAVMDMYAKCGDLD 364
D +P+ +T + +++AC++ G Q G+K Y I + +++ + ++D+ + G L
Sbjct: 378 DLQPDEITFIGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHYGCMVDLLCRAGLLA 436
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQM 406
A F + P + + + W ++ ++ + G +A F ++
Sbjct: 437 EARE-FIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKL 480
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLG 326
VF + D+++WNSML ++ + AL + EM + S P+ T L+ C L
Sbjct: 34 VFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
++G+ HG ++ + D + +++MYA CGDL +A +F + RN W +
Sbjct: 94 EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERM--GHRNKVVWTSM 151
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I+GY + +AL + +M E+G PD +T +++SAC+ + G K + + ++ +
Sbjct: 152 ISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
K + +V+M + G L A + ++ + W AL+
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQVFDKLS-DKDVYAWSALIFG 255
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/646 (37%), Positives = 381/646 (58%), Gaps = 12/646 (1%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
L +G+ I+ Y + AR +F+ + + LWNTMI ++ N + +++ ++ M
Sbjct: 148 LFVGSAIVDLYFKFTRAELARKVFDVMPERDT--VLWNTMISGFSRNSYFEDSIRVFVDM 205
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
G+S +S T VL A A G + + G SD YV L+ +Y+KCG++
Sbjct: 206 LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKS 265
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
G +FD++ DL+S+ MI+ Y + E A+ LF++ G +S T+V +
Sbjct: 266 CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVY 325
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+ ++ + ++ + + ++ +Y R V+ AR +FD ++ L SWN
Sbjct: 326 LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWN 385
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M++GY QNG A+ LF EM PNPVT ++SAC LG+ +G+ HG I +
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSE 444
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
++ + + A++DMYAKCG + A +F+ + ++NV +WN +I GYG+HGHG++AL+
Sbjct: 445 RLESNVYVSTALVDMYAKCGSIVEARQLFDLM--VDKNVVTWNAMITGYGLHGHGKEALK 502
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
F +ML+ G+ P +TF SIL ACSH+GL+ EG + F M +P +HYACMVD+L
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDIL 562
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GRAG L A + I++MPL P +VWGALL AC IH +A+ LFQL+PE+ GY+V
Sbjct: 563 GRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYV 622
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNIY+ + + +R+ +K + L K ++IE F + DR +P +++
Sbjct: 623 LLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFE 682
Query: 576 KVESMAVEIKMAGYMPD-LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
+E + +++ AGY + ++ ALHDVEDE++E M+N HSEKLA+AFG+++ P +++
Sbjct: 683 MLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII 742
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH+A +FIS I R I+VRDANRFHHF+ G CSC DYW
Sbjct: 743 KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 246/487 (50%), Gaps = 8/487 (1%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
F+ LL + L+ L QI + L G I+ L K+ K+ G R LFN +
Sbjct: 16 FFLTLLNNATTLSQLLQIQAQLILHG-IHYDLSSITKLTHKFFDLGAVAHVRQLFNKV-- 72
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEG 129
K FL+N +IR +++NG ++ LY+ +R+ + + +++T+ F + A + G
Sbjct: 73 SKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVG 132
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
++H I G S+ +V +A+VD+Y K + + KVFD M RD V W MI+ + +
Sbjct: 133 VLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRN 192
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
E+++ +F GL DS T+ +V +AV +L + + A D+ +
Sbjct: 193 SYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL 252
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
++++Y++CG K R++FD +++ DLIS+N+M++GY N + A+ LF E+ S +
Sbjct: 253 TGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQR 312
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N T + L+ QL R + + + ++ A+ +Y + ++ A +
Sbjct: 313 VNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F++ E++++SWN +I+GY +G +A+ F +M+ + + P+ +T TSILSAC+ G
Sbjct: 373 FDE--SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLG 429
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ G+ + ++ V +VDM + G + EA + M + N W A++
Sbjct: 430 ALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMI 488
Query: 490 LACRIHG 496
+HG
Sbjct: 489 TGYGLHG 495
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 244/646 (37%), Positives = 381/646 (58%), Gaps = 12/646 (1%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
L +G+ I+ Y + AR +F+ + + LWNTMI ++ N + +++ ++ M
Sbjct: 148 LFVGSAIVDLYFKFTRAELARKVFDVMPERDT--VLWNTMISGFSRNSYFEDSIRVFVDM 205
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
G+S +S T VL A A G + + G SD YV L+ +Y+KCG++
Sbjct: 206 LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKS 265
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
G +FD++ DL+S+ MI+ Y + E A+ LF++ G +S T+V +
Sbjct: 266 CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVY 325
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+ ++ + ++ + + ++ +Y R V+ AR +FD ++ L SWN
Sbjct: 326 LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWN 385
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M++GY QNG A+ LF EM PNPVT ++SAC LG+ +G+ HG I +
Sbjct: 386 AMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSE 444
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
++ + + A++DMYAKCG + A +F+ + ++NV +WN +I GYG+HGHG++AL+
Sbjct: 445 RLESNVYVSTALVDMYAKCGSIVEARQLFDLM--VDKNVVTWNAMITGYGLHGHGKEALK 502
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
F +ML+ G+ P +TF SIL ACSH+GL+ EG + F M +P +HYACMVD+L
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDIL 562
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GRAG L A + I++MPL P +VWGALL AC IH +A+ LFQL+PE+ GY+V
Sbjct: 563 GRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYV 622
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNIY+ + + +R+ +K + L K ++IE F + DR +P +++
Sbjct: 623 LLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFE 682
Query: 576 KVESMAVEIKMAGYMPD-LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
+E + +++ AGY + ++ ALHDVEDE++E M+N HSEKLA+AFG+++ P +++
Sbjct: 683 MLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRII 742
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH+A +FIS I R I+VRDANRFHHF+ G CSC DYW
Sbjct: 743 KNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 246/487 (50%), Gaps = 8/487 (1%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
F+ LL + L+ L QI + L G I+ L K+ K+ G R LFN +
Sbjct: 16 FFLTLLNNATTLSQLLQIQAQLILHG-IHYDLSSITKLTHKFFDLGAVAHVRQLFNKV-- 72
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEG 129
K FL+N +IR +++NG ++ LY+ +R+ + + +++T+ F + A + G
Sbjct: 73 SKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVG 132
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
++H I G S+ +V +A+VD+Y K + + KVFD M RD V W MI+ + +
Sbjct: 133 VLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRN 192
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
E+++ +F GL DS T+ +V +AV +L + + A D+ +
Sbjct: 193 SYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL 252
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
++++Y++CG K R++FD +++ DLIS+N+M++GY N + A+ LF E+ S +
Sbjct: 253 TGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQR 312
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N T + L+ QL R + + + ++ A+ +Y + ++ A +
Sbjct: 313 VNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F++ E++++SWN +I+GY +G +A+ F +M+ + + P+ +T TSILSAC+ G
Sbjct: 373 FDE--SPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLG 429
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ G+ + ++ V +VDM + G + EA + M + N W A++
Sbjct: 430 ALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMI 488
Query: 490 LACRIHG 496
+HG
Sbjct: 489 TGYGLHG 495
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/674 (38%), Positives = 386/674 (57%), Gaps = 49/674 (7%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
Q+L + + +LR +HS + L + LG K++ Y + + +AR +F+ I +
Sbjct: 47 QVLDTYPDIRTLRTVHSRIILEDLRCNS-SLGVKLMRAYASLKDVASARKVFDEI--PER 103
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ N MIR+Y NNG E ++++ TM + + YTFP VLKAC+ + I+ G+ +H
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIH 163
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G + G S +V LV MY KCG + V DEMS RD+VSW ++ Y Q ++ +
Sbjct: 164 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFD 223
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+AL + ++ + + D+ T+ S+ AV N E
Sbjct: 224 DALEVCREMESVKISHDAGTMASLLPAVS-----------------NTTTE--------- 257
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
NV + +F M K+ L+SWN M+ Y++N EA+ L+ M+ +P+ V
Sbjct: 258 -------NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
+ ++ AC + LG+K HGYI + + L NA++DMYAKCG L+ A ++F ++
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
R+V SW +I+ YG G G A+ FS++ + G+ PD I F + L+ACSHAGL++E
Sbjct: 371 --KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 434 GRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
GR CF MT + P ++H ACMVD+LGRAG + EA+ I+ M + PN+ VWGALL AC
Sbjct: 429 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Query: 493 RIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+H G +AA+ LFQL PE +GY+VL+SNIYA + +W EV +R MK+KGLKK
Sbjct: 489 RVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPG 548
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S +E + I F DR +P E+Y++++ + ++K GY+PD ALHDVE+ED+E
Sbjct: 549 ASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKET 608
Query: 608 MLNYHSEKLAVAFGIMNLTPEA-----VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
L HSEKLA+ F +MN E +++TKNLR+C DCH A + IS I R+II+RD
Sbjct: 609 HLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRD 668
Query: 663 ANRFHHFEGGTCSC 676
NRFH F G CSC
Sbjct: 669 TNRFHVFRFGVCSC 682
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 141/326 (43%), Gaps = 32/326 (9%)
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI--- 252
L L QK+ QE T+ + + D+ + VH I LEDL +S+
Sbjct: 31 LELDQKSPQE-------TVFLLGQVLDTYPDIRTLRTVHSRII----LEDLRCNSSLGVK 79
Query: 253 -VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ YA +V AR VFD + +R++I N M+ Y+ NG E + +F M + +P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T ++ AC+ G+ +GRK HG + + N ++ MY KCG L A + +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ S R+V SWN L+ GY + ALE +M + D T S+L A S+
Sbjct: 200 EM--SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--T 255
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP---LPPNDSVWGAL 488
E DM K + + M+ + + EA ++ +M P+ ++
Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 489 LLAC----------RIHGEIAANYLF 504
L AC +IHG I L
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLI 341
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/661 (38%), Positives = 393/661 (59%), Gaps = 12/661 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H + SG + +G ++ Y ++AR +F+ + S WN++I Y
Sbjct: 216 QLHGYILKSGF-GERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVIS--WNSIINGYV 272
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+NG + L ++ M SGI + T V CA + LI G+ VH ++ F +
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDR 332
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
L+DMY+KCG D VF EMS R +VS+T MI Y + EA+ LF++ ++EG
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ D T+ +V + + + + + VH + N D+ + N+++ MYA+CG++ +A
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAE 452
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYL 325
LVF M +D+ISWN+++ GY +N A+EAL LF+ + P+ T ++ AC L
Sbjct: 453 LVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASL 512
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ GR+ HGYI+ + D + N+++DMYAKCG L A +F+DI + +++ SW V
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDI--TSKDLVSWTV 570
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KL 444
+IAGYGMHG G++A+ F+QM + G++PD I+F S+L ACSH+GL+DEG + F M +
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
++P V+HYAC+VDML R G L +A+ I+ MP+PP+ ++WGALL CRIH E
Sbjct: 631 KIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERV 690
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A +F+LEPE+TGY+VLM+NIYA + KW EV +LR+ + +GL+K S IE +
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 750
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F D NP +++ + + + GY P AL D E+ ++E L HSEKLA+A
Sbjct: 751 FVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
GI++ +++VTKNLRVC DCH +F+S + RR+I++RD+NRFH F+ G CSC +
Sbjct: 811 LGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870
Query: 680 W 680
W
Sbjct: 871 W 871
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 159/552 (28%), Positives = 275/552 (49%), Gaps = 29/552 (5%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
+ P T QL L +++ + + +G + + +LG+K+ + YT G+ A
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDS-NLGSKLALMYTNCGDLKEASR 150
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+ + +K+ WN ++ A +G ++ L+ M SG+ +SYTF V K+ +S
Sbjct: 151 VFDQVKIEKA--LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ G+ +HG I+++GF + V +LV Y K + D KVFDEM+ RD++SW +I
Sbjct: 209 RSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSII 268
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
Y E+ L +F + G+ D TIVSV + + +AVH + + F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFS 328
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ N+++ MY++CG+++ A++VF M R ++S+ SM+ GY + G A EA+ LF+EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ P+ T +++ C G++ H +I ++M D + NA+MDMYAKCG +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSM 448
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML-EEGVKPDHITFTSIL 422
AE +F+++ +++ SWN +I GY + + +AL F+ +L E+ PD T +L
Sbjct: 449 REAELVFSEMRV--KDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVL 506
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLP 479
AC+ D+GR+ + + + +VDM + G L A FD I L
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLV 566
Query: 480 PNDSVWGALLLACRIHG---EIAA--NYLFQ--LEPEHTGYFVLMSNIYAASNK------ 526
W ++ +HG E A N + Q +EP+ + L+ YA S+
Sbjct: 567 S----WTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLL---YACSHSGLVDEG 619
Query: 527 WREVGKLREDMK 538
WR +R + K
Sbjct: 620 WRFFNIMRHECK 631
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 211/398 (53%), Gaps = 4/398 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
NT +R + +G+ ++L + I + T VL+ CA + + +GK V I
Sbjct: 65 NTQLRRFCESGNLKNAVKLLHVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF+ DS + + L MY CG + +VFD++ + + W +++ ++ ++ L
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F+K G+ DS T V+ + L V + +HGY + + F E + NS+VA Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLK 242
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
V+ AR VFD M +RD+ISWNS++ GY+ NG A + L +F +M S + + T + +
Sbjct: 243 NHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSV 302
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ C LGR H + + + + N ++DMY+KCGDLD+A+ +F ++ S R
Sbjct: 303 FAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREM--SGR 360
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V S+ +IAGY G +A++ F +M EEG+ PD T T++L+ C+ L+DEG++
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVH 420
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ + + ++ ++DM + G + EA + +M
Sbjct: 421 EWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEM 458
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/612 (39%), Positives = 377/612 (61%), Gaps = 9/612 (1%)
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE-GKVVHG 134
FL+NT+IR +N + + +Y++MR+ G + +++TFPFVLKAC G +H
Sbjct: 67 FLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHS 126
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+I+TGF D +V+ LV +Y+K G D KVFDE+ +++VSWT +I Y ++ E
Sbjct: 127 LVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGE 186
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL LF+ + GL DS T+V + A ++GD+ + + GY + + ++ + S+V
Sbjct: 187 ALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVD 246
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MYA+CG++E+AR VFD M ++D++ W++++ GY NG EAL +F EMQ + +P+
Sbjct: 247 MYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYA 306
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+ + SAC+ LG+ +LG G + + L A++D YAKCG + A+ +F +
Sbjct: 307 MVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMR 366
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
++ +N +I+G M GH A F QM++ G++PD TF +L C+HAGL+D+G
Sbjct: 367 --RKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG 424
Query: 435 RKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
+ F+ M+ + SV P ++HY CMVD+ RAG L EA D+I+ MP+ N VWGALL CR
Sbjct: 425 HRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCR 484
Query: 494 IH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
+H E L +LEP ++G++VL+SNIY+AS++W E K+R + KG++K
Sbjct: 485 LHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGC 544
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S +E + F D +P ++Y+K+ES+ +++ AGY P L DVE+E++E+
Sbjct: 545 SWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYF 604
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
L HSEKLAVAF +++ + V++V KNLRVC DCH A + +S + R+IIVRD NRFHH
Sbjct: 605 LGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHH 664
Query: 669 FEGGTCSCNDYW 680
F G+CSC DYW
Sbjct: 665 FTEGSCSCRDYW 676
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/739 (36%), Positives = 419/739 (56%), Gaps = 62/739 (8%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M+RLG + + + +LK+C + S R +H+ + SG + +G ++ Y G
Sbjct: 136 MQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGF-EWNVFVGNGLVSMYGRCG 194
Query: 57 EPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFP 114
AR +F+ + + WN+++ AY G + ++++ M GI ++ +
Sbjct: 195 AWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLV 254
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
VL ACAS GK VHG +R+G D +V A+VDMYAKCG ++ KVF+ M V+
Sbjct: 255 NVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK 314
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQE----------------------------- 205
D+VSW M+T Y Q + ++AL LF+K ++E
Sbjct: 315 DVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVF 374
Query: 206 ------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC-------NAFLEDLCIQNSI 252
G + VT+VS+ S G +L + H +AI N +DL + N++
Sbjct: 375 RQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINAL 434
Query: 253 VAMYARCGNVEKARLVFDMMEKRD--LISWNSMLTGYIQNGQASEALLLFDEMQNSD--C 308
+ MY++C + + AR +FD++ +D +++W ++ G Q+G+A+EAL LF +M D
Sbjct: 435 IDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFV 494
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT-LRNAVMDMYAKCGDLDTAE 367
PN T + AC LG+ + GR+ H Y++ + + + N ++DMY+K GD+D A
Sbjct: 495 MPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAAR 554
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+++H +RN SW L+ GYGMHG G +AL+ F +M + + PD +TF +L ACSH
Sbjct: 555 VVFDNMH--QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSH 612
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+G++D+G F M K V P +HYACMVD+L RAG L EA ++I+ MP+ P +VW
Sbjct: 613 SGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWV 672
Query: 487 ALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
ALL ACR++ GE AAN L +LE + G + L+SNIYA + W++V ++R MKN G
Sbjct: 673 ALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTG 732
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+KK S ++ K F D +P +++Y + + IK GY+PD ALHDV+
Sbjct: 733 IKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVD 792
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
DE++ +L+ HSEKLA+A+GI+ P A +++TKNLR C DCHSAF +IS I +IIVR
Sbjct: 793 DEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVR 852
Query: 662 DANRFHHFEGGTCSCNDYW 680
D++RFHHF+ G+CSC YW
Sbjct: 853 DSSRFHHFKNGSCSCRGYW 871
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 268/543 (49%), Gaps = 60/543 (11%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
ST L C LAS H L GL + H II Y T+ P A S+
Sbjct: 46 STTDLTSTLFHQCKSLASAELTHQQLLVQGLPHDPTH----IISMYLTFNSPAKALSVLR 101
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+H F WN +IR + G + L+LY M+R G + YTFPFVLKAC
Sbjct: 102 RLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSF 161
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR---DLVSWTVMI 183
G VH + +GF + +V LV MY +CG ++ +VFDEM R DLVSW ++
Sbjct: 162 RCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIV 221
Query: 184 TAYEQAEKPEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
AY Q A+ +F++ T+ G+ D+V++V+V A +G + + VHGYA+ +
Sbjct: 222 AAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGL 281
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
ED+ + N++V MYA+CG +E+A VF+ M+ +D++SWN+M+TGY Q G+ +AL LF++
Sbjct: 282 FEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEK 341
Query: 303 MQNSD-----------------------------------CKPNPVTALILVSACTYLGS 327
++ +PN VT + L+S C G+
Sbjct: 342 IREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGT 401
Query: 328 RQLGRKFHGYIINSNMKIDAT-------LRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
G++ H + I + +D + NA++DMY+KC A MF+ I P +R+V
Sbjct: 402 LLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSV 461
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEG--VKPDHITFTSILSACSHAGLIDEGRKCF 438
+W VLI G HG +ALE FSQML+ V P+ T + L AC+ G + GR+
Sbjct: 462 VTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIH 521
Query: 439 ADMTKLSVKPEVKHYA-CMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRI 494
A + + + + A C++DM ++G + A FD + Q N W +L+ +
Sbjct: 522 AYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQR----NGVSWTSLMTGYGM 577
Query: 495 HGE 497
HG
Sbjct: 578 HGR 580
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/661 (37%), Positives = 391/661 (59%), Gaps = 12/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH + T+G + + A ++ Y + A +F + S WNT++ Y
Sbjct: 162 REIHGMVITNGFQSNLFAMTA-VVNLYAKCRQIEDAYKMFERMPQRDLVS--WNTVVAGY 218
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A NG +++ M+ +G +S T VL A A + G+ +HG R GF
Sbjct: 219 AQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMV 278
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V A++D Y KCG VF MS R++VSW MI Y Q + EEA F K E
Sbjct: 279 NVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDE 338
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ +V+++ A LGD+ + + VH D+ + NS+++MY++C V+ A
Sbjct: 339 GVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIA 398
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF ++ + +++WN+M+ GY QNG +EAL LF EMQ+ D KP+ T + +++A L
Sbjct: 399 ASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADL 458
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + HG I + M + + A++D +AKCG + TA +F+ + ER+V +WN
Sbjct: 459 SVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQ--ERHVITWNA 516
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-L 444
+I GYG +GHGR+AL+ F++M VKP+ ITF S+++ACSH+GL++EG F M +
Sbjct: 517 MIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENY 576
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
++P + HY MVD+LGRAG L +A+ I+ MP+ P +V GA+L ACRIH GE
Sbjct: 577 GLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKT 636
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A+ LF L+P+ GY VL++N+YA+++ W +V ++R M+ KG++K S++E ++
Sbjct: 637 ADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHT 696
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F++ +P K +Y +E++ E+K AGY+PD + ++HDVE++ +E +L+ HSE+LA+A
Sbjct: 697 FYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTN-SIHDVEEDVKEQLLSSHSERLAIA 755
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG++N + + KNLRVC DCH A ++IS + R+IIVRD RFHHF+ G CSC DY
Sbjct: 756 FGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDY 815
Query: 680 W 680
W
Sbjct: 816 W 816
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/572 (40%), Positives = 362/572 (63%), Gaps = 9/572 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+LK C + + EGK++H ++ + F D +Q L+++YAKCG K+FDEMS RD
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG--DVLKAQAV 233
+V+WT +IT Y Q ++P++AL+L + + GL + T+ S+ A +G DVL+ + +
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
HG + + ++ + +I+ MYARC ++E+A+L+FD+M ++ +SWN+++ GY + GQ
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
+A LF M + KP T ++ AC +GS + G+ H +I K+ A + N +
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+DMYAK G ++ A+ +F+ + ++R+V SWN ++ GY HG G+ AL+ F +ML + P
Sbjct: 261 LDMYAKSGSIEDAKKVFDRL--AKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAP 318
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+ ITF +L+ACSHAGL+DEGR F M K +V+P++ HY MVD+LGRAG L A I
Sbjct: 319 NDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378
Query: 474 KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
+MP+ P +VWGALL ACR+H G AA +F+L+ + G VL+ NIYA + +W
Sbjct: 379 SEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWN 438
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
+ K+R+ MK G+KK A S +E ++ F D +P +E++ E ++ +IK G
Sbjct: 439 DAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIG 498
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y+PD S L ++ ++RE L YHSEKLA+AF ++N P + +++ KN+R+C DCHSAF+
Sbjct: 499 YVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFK 558
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
F+S + R+IIVRD NRFHHF G CSC DYW
Sbjct: 559 FVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 199/386 (51%), Gaps = 13/386 (3%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LLK C L L + IH+ L S + L + ++ Y G+ AR LF+ + +
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDD-LVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA--SNSLILEG 129
+ W +I Y+ + + L L M R G+ N +T +LKA + ++ +L+G
Sbjct: 80 DVVT--WTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ +HG +R G+ S+ YV A++DMYA+C ++ +FD M ++ VSW +I Y +
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC-- 247
+ ++A LF +E + T SV A +G + + + VH I + E L
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMI--KWGEKLVAF 255
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N+++ MYA+ G++E A+ VFD + KRD++SWNSMLTGY Q+G AL F+EM +
Sbjct: 256 VGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTR 315
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN +T L +++AC++ G GR + + N++ + ++D+ + G LD A
Sbjct: 316 IAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAI 375
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMH 393
+++ P + + W L+ MH
Sbjct: 376 QFISEM-PIKPTAAVWGALLGACRMH 400
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 14/293 (4%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL-----RQIHSSLTTSGLINQALHLGAKIIIKYTT 54
M R+G F LLK+ + + S RQ+H G + +++ I+ Y
Sbjct: 107 MLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGY-DSNVYVSCAILDMYAR 165
Query: 55 YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
A+ +F+ + + S WN +I YA G + L+S M R + +T+
Sbjct: 166 CHHLEEAQLIFDVMVSKNEVS--WNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYS 223
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
VL ACAS + +GK VH +I+ G ++V L+DMYAK G +D KVFD ++ R
Sbjct: 224 SVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKR 283
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
D+VSW M+T Y Q + AL F++ + + + +T + V +A G L + H
Sbjct: 284 DVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAG--LLDEGRH 341
Query: 235 GYAICNAFLEDLCIQN--SIVAMYARCGNVEKA-RLVFDMMEKRDLISWNSML 284
+ + + + I + ++V + R G++++A + + +M K W ++L
Sbjct: 342 YFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 255/690 (36%), Positives = 403/690 (58%), Gaps = 40/690 (5%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ + + L + +L + I+ Y+ + + +FNS+ + + + W ++IR Y
Sbjct: 25 KQLHAQILRTSLPSPSLL--STILSIYSNLNLLHDSLLIFNSLPSPPT-TLAWKSIIRCY 81
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
++G + +L + M SG + FP VLK+C + G+ VHG IIR G D
Sbjct: 82 TSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDL 141
Query: 146 YVQAALVDMYAKC---------------GQTDDGC--------------KVFDEMSVRDL 176
Y AL++MY+K G+T D KVF+ M RD+
Sbjct: 142 YTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDI 201
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW +I+ Q E+AL++ ++ L DS T+ SV + ++LK + +HGY
Sbjct: 202 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGY 261
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
AI N + D+ I +S++ MYA+C V+ + VF M+ + D ISWNS++ G +QNG E
Sbjct: 262 AIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 321
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L F +M + KPN V+ ++ AC +L + LG++ HGYII S + + +A++DM
Sbjct: 322 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDM 381
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAKCG++ TA +F+ + + + SW +I GY +HGH A+ F +M EGVKP+++
Sbjct: 382 YAKCGNIRTARWIFDKMELYD--MVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYV 439
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
F ++L+ACSHAGL+DE K F MT+ + P ++HYA + D+LGR G L EA++ I
Sbjct: 440 AFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISD 499
Query: 476 MPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
M + P SVW LL ACR+H I + LF ++P++ G +VL+SNIY+A+ +W++
Sbjct: 500 MHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDA 559
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
KLR M++KG+KK A S IE + F D+ +PY+ + + ++ + +++ GY+
Sbjct: 560 RKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYV 619
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
D + LHDVE+E + ++L HSE+LA+ FGI++ ++VTKNLRVC DCH+A +FI
Sbjct: 620 LDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFI 679
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S I R+I+VRD +RFHHF+ G CSC D+W
Sbjct: 680 SKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 260/681 (38%), Positives = 398/681 (58%), Gaps = 21/681 (3%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C+ L R+IH + L +++ ++ Y G + A+ +F+ +H
Sbjct: 125 VLKACSALKEASEGREIHCDIKRLRL-ESNVYVSTALVDFYAKCGCLDDAKEVFDKMH-- 181
Query: 72 KSYSFLWNTMIRAYA-NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
K WN+MI ++ + G E L M+ +S NS T VL A A + + GK
Sbjct: 182 KRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGK 240
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS-VRDLVSWTVMITAYEQA 189
+HG +R GF+ D V ++D+Y KC D ++FD M V++ V+W+ M+ AY
Sbjct: 241 EIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVC 300
Query: 190 EKPEEALILFQKT---QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ EAL LF + + + ++ +VT+ +V L D+ +H YAI + F+ DL
Sbjct: 301 DFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDL 360
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N++++MYA+CG + A F+ M+ RD +S+ ++++GY+QNG + E L +F EMQ S
Sbjct: 361 MVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLS 420
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
P T ++ AC +L G H Y I D + NA++DMYAKCG +DTA
Sbjct: 421 GINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTA 480
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F+ +H +R + SWN +I YG+HG G +AL F M EG+KPD +TF ++SACS
Sbjct: 481 RKVFDRMH--KRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACS 538
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL+ EG+ F MT+ + P ++HYACMVD+L RAG E I++MPL P+ VW
Sbjct: 539 HSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVW 598
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GALL ACR++ GE + + +L PE TG FVL+SN+Y+A +W + ++R K +
Sbjct: 599 GALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQ 658
Query: 541 GLKKPAAFSVIEYGKDIQGFHTAD-RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
G +K S IE + F R +P ++ K++ + VE+K GY + S D
Sbjct: 659 GFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQD 718
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
VE+E++E +L YHSEKLA+AFGI++L+P+ + VTKNLRVC DCH+A +FIS + +R I
Sbjct: 719 VEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDIT 778
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRDA+RFHHF+ G C+C D+W
Sbjct: 779 VRDASRFHHFKDGICNCGDFW 799
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 163/540 (30%), Positives = 257/540 (47%), Gaps = 55/540 (10%)
Query: 47 KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI 106
K++ Y E AR +F+ + + LWN +IRAYA NG E ++LY M GI
Sbjct: 56 KLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGI 115
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
+ N +TFPFVLKAC++ EG+ +H DI R S+ YV ALVD YAKCG DD +
Sbjct: 116 TPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKE 175
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
VFD+M RD+V+W MI+ + E + + Q + +S TIV V AV Q+
Sbjct: 176 VFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNS 235
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRDLISWNSMLT 285
+ + +HG+ + F+ D+ + I+ +Y +C ++ AR +FDMM ++ ++W++M+
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVG 295
Query: 286 GYIQNGQASEALLLFDE---MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
Y+ EAL LF + +++ + VT ++ C L G H Y I S
Sbjct: 296 AYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSG 355
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+D + N ++ MYAKCG ++ A FN++ R+ S+ +I+GY +G+ + L
Sbjct: 356 FVLDLMVGNTLLSMYAKCGIINGAMRFFNEM--DLRDAVSFTAIISGYVQNGNSEEGLRM 413
Query: 403 FSQMLEEGVKPDHITFTSILSACSH-AGL------------------------------- 430
F +M G+ P+ T S+L AC+H AGL
Sbjct: 414 FLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAK 473
Query: 431 ---IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV 484
ID RK F M K + + M+ G G EA FD ++ L P+D
Sbjct: 474 CGKIDTARKVFDRMHKRGIVS----WNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVT 529
Query: 485 WGALLLACRIHGEIA-ANYLFQLEPEHTG------YFVLMSNIYAASNKWREVGKLREDM 537
+ L+ AC G +A Y F + G ++ M ++ + + ++EV E M
Sbjct: 530 FICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKM 589
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 174/349 (49%), Gaps = 22/349 (6%)
Query: 116 VLKACASNSLILEGKVVHGDIIR-------TGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
+L++C + + GK++H +++ T + LVD+Y C + VF
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 169 DEMSVR--DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
D+M R ++V W ++I AY EEA+ L+ K G+ + T V A L +
Sbjct: 75 DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ + +H ++ + ++V YA+CG ++ A+ VFD M KRD+++WNSM++G
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194
Query: 287 Y-IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+ + G E L +MQN D PN T + ++ A + S + G++ HG+ +
Sbjct: 195 FSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVG 253
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + ++D+Y KC +D A +F D+ +N +W+ ++ Y + R+ALE F Q
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIF-DMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQ 312
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
+L +K D I +LSA + A +I R C A++T LS + YA
Sbjct: 313 LLM--LKDDVI----VLSAVTLATVI---RVC-ANLTDLSTGTCLHCYA 351
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/686 (37%), Positives = 394/686 (57%), Gaps = 16/686 (2%)
Query: 5 GPSTEGFYDQLLKSCNF---LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTA 61
P + LLK C LA+ R +H+ L G+ ++AL A + Y P A
Sbjct: 55 APPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA-LANMYAKCRRPADA 113
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKAC 120
R +F+ + + WN ++ YA NG +E+ M+ G +S T VL AC
Sbjct: 114 RRVFDRMPVRDRVA--WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPAC 171
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A+ + + H IR+G V A++D Y KCG VFD M ++ VSW
Sbjct: 172 ANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWN 231
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI Y Q EAL LF + +EG+ V++++ A G+LG + + VH +
Sbjct: 232 AMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI 291
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
++ + N+++ MY++C V+ A VFD +++R +SWN+M+ G QNG + +A+ LF
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
MQ + KP+ T + ++ A + R HGY I ++ D + A++DMYAKC
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G ++ A +FN ER+V +WN +I GYG HG G+ A+E F +M G+ P+ TF S
Sbjct: 412 GRVNIARILFNS--ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLS 469
Query: 421 ILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSACSHAGL+DEGR+ F M + ++P ++HY MVD+LGRAG L EA+ I++MP+
Sbjct: 470 VLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMD 529
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P SV+GA+L AC++H E +A +F+L P+ Y VL++NIYA ++ W++V ++R
Sbjct: 530 PGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVR 589
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
M+ GL+K +S+I+ +I F++ + KE+Y ++ + EIK GY+PD
Sbjct: 590 TAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTD 649
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
++HDVED+ + +LN HSEKLA+AFG++ P +Q+ KNLRVCNDCH+A + IS +
Sbjct: 650 -SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVT 708
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R+II+RD RFHHF+ G CSC DYW
Sbjct: 709 GREIIMRDIQRFHHFKDGKCSCGDYW 734
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 258/686 (37%), Positives = 394/686 (57%), Gaps = 16/686 (2%)
Query: 5 GPSTEGFYDQLLKSCNF---LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTA 61
P + LLK C LA+ R +H+ L G+ ++AL A + Y P A
Sbjct: 55 APPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA-LANMYAKCRRPADA 113
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKAC 120
R +F+ + + WN ++ YA NG +E+ M+ G +S T VL AC
Sbjct: 114 RRVFDRMPVRDRVA--WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPAC 171
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A+ + + H IR+G V A++D Y KCG VFD M ++ VSW
Sbjct: 172 ANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWN 231
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI Y Q EAL LF + +EG+ V++++ A G+LG + + VH +
Sbjct: 232 AMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI 291
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
++ + N+++ MY++C V+ A VFD +++R +SWN+M+ G QNG + +A+ LF
Sbjct: 292 GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLF 351
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
MQ + KP+ T + ++ A + R HGY I ++ D + A++DMYAKC
Sbjct: 352 TRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKC 411
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G ++ A +FN ER+V +WN +I GYG HG G+ A+E F +M G+ P+ TF S
Sbjct: 412 GRVNIARILFNS--ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLS 469
Query: 421 ILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSACSHAGL+DEGR+ F M + ++P ++HY MVD+LGRAG L EA+ I++MP+
Sbjct: 470 VLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMD 529
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P SV+GA+L AC++H E +A +F+L P+ Y VL++NIYA ++ W++V ++R
Sbjct: 530 PGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVR 589
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
M+ GL+K +S+I+ +I F++ + KE+Y ++ + EIK GY+PD
Sbjct: 590 TAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTD 649
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
++HDVED+ + +LN HSEKLA+AFG++ P +Q+ KNLRVCNDCH+A + IS +
Sbjct: 650 -SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLVT 708
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R+II+RD RFHHF+ G CSC DYW
Sbjct: 709 GREIIMRDIQRFHHFKDGKCSCGDYW 734
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/688 (37%), Positives = 390/688 (56%), Gaps = 39/688 (5%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ +G + + ++ Y G N A++LF S WNT+I +
Sbjct: 454 KQVHAYTLRNGDLRT--YTNNALVTMYARLGRVNDAKALFGVFDGKDLVS--WNTVISSL 509
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG-FLSD 144
+ N E L M G+ + T VL AC+ + G+ +H +R G + +
Sbjct: 510 SQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIEN 569
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
S+V ALVDMY C Q G VFD + R + W ++ Y + E ++AL LF +
Sbjct: 570 SFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMIS 629
Query: 205 EG-LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
E ++ T SV A + + +HGY + F +D +QN+++ MY+R G VE
Sbjct: 630 ESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVE 689
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ------NSDC--------- 308
++ +F M KRD++SWN+M+TG I G+ +AL L EMQ SD
Sbjct: 690 ISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGG 749
Query: 309 ---KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
KPN VT + ++ C L + G++ H Y + + +D + +A++DMYAKCG L+
Sbjct: 750 VPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNL 809
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG------VKPDHITFT 419
A +F+ + RNV +WNVLI YGMHG G +ALE F M G ++P+ +T+
Sbjct: 810 ASRVFDQM--PIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYI 867
Query: 420 SILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
+I +ACSH+G++DEG F M V+P HYAC+VD+LGR+G + EA+++I MP
Sbjct: 868 AIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPS 927
Query: 479 PPND-SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
N W +LL ACRIH GEIAA +LF LEP ++VLMSNIY+++ W +
Sbjct: 928 NLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALG 987
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R+ MK G++K S IE+G ++ F + D +P KE+++ +E+++ ++ GY+PD
Sbjct: 988 VRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPD 1047
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
+SC LH+V+DE++E ML HSE+LA+AFG++N P ++V KNLRVCNDCH A + IS
Sbjct: 1048 ISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISK 1107
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I R+II+RD RFHHF GTCSC DYW
Sbjct: 1108 IVDREIILRDVRRFHHFANGTCSCGDYW 1135
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 214/438 (48%), Gaps = 13/438 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W ++R+ ++ + + Y+ M + +++ FP VLKA A+ + GK +H +
Sbjct: 298 WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357
Query: 138 RTGFLSDSYVQAA--LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+ G S V A LV+MY KCG +VFD++ RD VSW MI + E+ E +
Sbjct: 358 KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 417
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQL-GDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
L LF+ E + S T+VSVA A + G V + VH Y + N L N++V
Sbjct: 418 LHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTY-TNNALVT 476
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MYAR G V A+ +F + + +DL+SWN++++ QN + EAL+ M +P+ VT
Sbjct: 477 MYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVT 536
Query: 315 ALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
++ AC+ L ++GR+ H Y + N ++ ++ + A++DMY C +F+ +
Sbjct: 537 LASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGV 596
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLID 432
R V+ WN L+AGY + +AL F +M+ E P+ TF S+L AC +
Sbjct: 597 --VRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFS 654
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA 491
+ + K + ++DM R G + + + +M D V W ++
Sbjct: 655 DKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRM--NKRDIVSWNTMITG 712
Query: 492 CRIHGEI--AANYLFQLE 507
C + G A N L +++
Sbjct: 713 CIVCGRYDDALNLLHEMQ 730
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 252/684 (36%), Positives = 384/684 (56%), Gaps = 60/684 (8%)
Query: 13 DQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSLFNSIH 69
++ L+ C L L+Q+H +T +GL +Q K++ P + AR F
Sbjct: 29 NESLRCCKTLNQLKQLHCQITKNGL-DQIPSTLTKLVNAGAEIASPESLDYARKAFELFK 87
Query: 70 NDKSYS---FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
D F+ N++IR Y++ G E + LY M G++ N YTFPFVL C +
Sbjct: 88 EDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAF 147
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
EG VHG +++ G D ++Q L+ YA+CG D G KVF+ MS R++VSWT +I Y
Sbjct: 148 CEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGY 207
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ ++P+EA+ LF + + N +
Sbjct: 208 ARGDRPKEAVSLF------------------------------------FEMLNKVM--- 228
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
N++V MY +CG ++ A+ +FD R+L+ +N++L+ Y + G A EAL + DEM
Sbjct: 229 --VNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQ 286
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-----NMKIDATLRNAVMDMYAKCG 361
+P+ VT L +SA L G+ HGY +++ + D L A++DM+A+CG
Sbjct: 287 GPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCG 346
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
D +A +FN + +ER+VS+W I M G+G A F+QML +GVKPD + F +
Sbjct: 347 DPQSAMQVFNKM--TERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQV 404
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
L+ACSH G +++G F+ M + P+++HY CMVD+LGRAG L EAFD+IK MP+ PN
Sbjct: 405 LTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPN 464
Query: 482 DSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRED 536
D VWG+LL ACR+H + AA + +L P+ G VL+SNIYA++ KW +V ++R +
Sbjct: 465 DVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLN 524
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCA 596
++ KG++K S ++ I F + D +P + ++ M AG++PDLS
Sbjct: 525 LREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNV 584
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
L DV+++++E++L+ HSEKLA+AFG++ ++V KNLR+C+DCHS + S IY R
Sbjct: 585 LLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNR 644
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
+IIVRD NRFH F G CSC DYW
Sbjct: 645 EIIVRDNNRFHFFRQGLCSCCDYW 668
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/711 (35%), Positives = 394/711 (55%), Gaps = 50/711 (7%)
Query: 15 LLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+CN L R+IH+ + G+ + + +I Y+ GE + A +F+ +
Sbjct: 163 ILKACNNYSILEKGRKIHTIVKAMGM-ETDVAVATALITMYSKCGEISVACEVFHKMTER 221
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W +I+A A + E ELY M ++GIS N+ TF +L +C + + G+
Sbjct: 222 NVVS--WTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRR 279
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA-- 189
+H I G +D V AL+ MY KC + ++FD MS RD++SW+ MI Y Q+
Sbjct: 280 IHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGY 339
Query: 190 ---EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG----------- 235
E +E L ++ ++EG+ + VT +S+ A G + + + +H
Sbjct: 340 KDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDR 399
Query: 236 ---------YAICNAFLE-----------DLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
YA C + E ++ S ++MY +CG++ A VF M R
Sbjct: 400 SLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTR 459
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
+++SWN M+ GY QNG + L M+ +P+ VT + ++ AC L + G+ H
Sbjct: 460 NVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVH 519
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ ++ D + +++ MY+KCG + A +F+ + S R+ +WN ++AGYG HG
Sbjct: 520 AEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKM--SNRDTVAWNAMLAGYGQHGD 577
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYA 454
G +A++ F +ML+E V P+ IT T+++SACS AGL+ EGR+ F M + + P +HY
Sbjct: 578 GLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYG 637
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPE 509
CMVD+LGRAG L EA + I+ MP P+ SVW ALL AC+ H E AA+++ +LEP
Sbjct: 638 CMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPS 697
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
+ ++ +SNIYA + +W + K+R M ++GLKK S IE I F D +P
Sbjct: 698 YASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPE 757
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
++ ++E++ E+K AGY PD+ LHDV+D +E L +HSEKLA+A+G++
Sbjct: 758 IDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGT 817
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLRVC DCH+A +FIS I +R+I+ RDANRFH+F GTCSC D+W
Sbjct: 818 PIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 260/507 (51%), Gaps = 40/507 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ +H L G + ++LG +I Y+ + + +A +F + + W++MI AY
Sbjct: 76 KMVHKQLDELG-VEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVT--WSSMIAAY 132
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A N H + + + M + I N TF +LKAC + S++ +G+ +H + G +D
Sbjct: 133 AGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDV 192
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V AL+ MY+KCG+ C+VF +M+ R++VSWT +I A Q K EA L+++ Q
Sbjct: 193 AVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQA 252
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ ++VT VS+ ++ + + + +H + D+ + N+++ MY +C +V++A
Sbjct: 253 GISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEA 312
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNG-----QASEALLLFDEMQNSDCKPNPVTALILVS 320
R +FD M KRD+ISW++M+ GY Q+G E L + M+ PN VT + ++
Sbjct: 313 REIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILR 372
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN--------- 371
ACT G+ + GR+ H + ++D +L+ A+ +MYAKCG + AE +F+
Sbjct: 373 ACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVA 432
Query: 372 ------------DIHPSE--------RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
D+ +E RNV SWN++IAGY +G K E S M EG
Sbjct: 433 WTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGF 492
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+PD +T +IL AC ++ G+ A+ KL ++ + ++ M + G + EA
Sbjct: 493 QPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEART 552
Query: 472 MIKQMPLPPNDSV-WGALLLACRIHGE 497
+ +M D+V W A+L HG+
Sbjct: 553 VFDKM--SNRDTVAWNAMLAGYGQHGD 577
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 239/470 (50%), Gaps = 11/470 (2%)
Query: 89 GHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQ 148
G E ++L +++ G+ NS T+ V++ CA +GK+VH + G D Y+
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 149 AALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL 208
+L++ Y+K +VF M++RD+V+W+ MI AY P +A F++ +
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
+ +T +S+ A + K + +H D+ + +++ MY++CG + A V
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F M +R+++SW +++ Q+ + +EA L+++M + PN VT + L+++C +
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
GR+ H +I ++ D + NA++ MY KC + A +F+ + S+R+V SW+ +IA
Sbjct: 275 NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRM--SKRDVISWSAMIA 332
Query: 389 GYGMHGHGRK-----ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
GY G+ K + +M EGV P+ +TF SIL AC+ G +++GR+ A+++K
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-AANY 502
+ + + + +M + G +YEA + +M N W + L G++ +A
Sbjct: 393 VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFLSMYIKCGDLSSAEK 451
Query: 503 LFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
+F P + + LM YA + +V +L MK +G +P +VI
Sbjct: 452 VFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGF-QPDRVTVI 500
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 242/645 (37%), Positives = 378/645 (58%), Gaps = 10/645 (1%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
L +G+ I+ Y + AR +F+ + + LWNTM+ N E + ++ M
Sbjct: 141 LFVGSAIVACYFKFSRVAAARKVFDGMLERDT--VLWNTMVSGLVKNSCFDEAILIFGDM 198
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
+ GI +S T VL A + G + ++ GF S +YV L +Y+KCG+
Sbjct: 199 VKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEI 258
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
+ +F ++ DLVS+ MI+ Y + E ++ LF++ G +S +IV +
Sbjct: 259 ETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVF 318
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
G + + +HG+ + + + + ++ +Y+R +E ARL+FD ++ L SWN
Sbjct: 319 FPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWN 378
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M++GY QNG +A+ LF EMQ + +PNPVT ++SAC LG+ LG+ H I
Sbjct: 379 AMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE 438
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + + + A++DMYAKCG + A+ +F+ + E+N +WN +I+GYG+HG+G +AL
Sbjct: 439 SFESNIFVSTALIDMYAKCGSITEAQRLFSMM--PEKNAVTWNAMISGYGLHGYGHEALN 496
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDML 460
F++ML V P +TF S+L ACSHAGL+ EG + F M +P +HYACMVD+L
Sbjct: 497 LFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLL 556
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GRAG L +A D I++MP+ P VWGALL AC IH +A++ LF+L+P++ GY+V
Sbjct: 557 GRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYV 616
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNIY+A + E +R +K + L K ++IE + F + D+ +P +Y
Sbjct: 617 LLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYA 676
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
+E + +++ AG+ + ALHDVE+E++E M+ HSEKLA+AFG++ P +++ K
Sbjct: 677 MLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIK 736
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLRVC DCH+A +FIS I R I+VRDANRFHHF+ G CSC DYW
Sbjct: 737 NLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 251/491 (51%), Gaps = 10/491 (2%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
ST + L+ + L L Q H+ + +GL N + + K+ K + + A LF+
Sbjct: 8 STRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTV-TKLTHKLSHLKAIDQASLLFS 66
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSL 125
+I N FL+N +IRA++ N + LY+ +R+S + +++T+ FV+ +S L
Sbjct: 67 TIPNPDL--FLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGL 124
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
L I GF SD +V +A+V Y K + KVFD M RD V W M++
Sbjct: 125 GLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSG 181
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+ +EA+++F + G+ DS T+ +V V +L D+ + A+ F
Sbjct: 182 LVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSH 241
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ + +Y++CG +E ARL+F + + DL+S+N+M++GY N + ++ LF E+
Sbjct: 242 AYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLV 301
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
S K N + + L+ G L R HG+ S + ++++ A+ +Y++ ++++
Sbjct: 302 SGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIES 361
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F++ SE++++SWN +I+GY +G KA+ F +M + V+P+ +T TSILSAC
Sbjct: 362 ARLLFDE--SSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSAC 419
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
+ G + G+ + + S + + ++DM + G + EA + MP N W
Sbjct: 420 AQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTW 478
Query: 486 GALLLACRIHG 496
A++ +HG
Sbjct: 479 NAMISGYGLHG 489
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 251/667 (37%), Positives = 379/667 (56%), Gaps = 13/667 (1%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L + RQ+H ++ +G A ++ Y+ G+ A ++F + S WN
Sbjct: 221 LEAGRQVHGAVVRTGYEKDVFTANA-LVDMYSKLGDIEMAATVFEKMPAADVVS--WNAF 277
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I +GH LEL M+ SG+ N +T VLKACA G+ +HG +++
Sbjct: 278 ISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVA 337
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D +V LVDMYAK G DD KVFD M RDL+ W +I+ + E L LF +
Sbjct: 338 DFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHR 397
Query: 202 TQQEGLLSD--SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
++EGL D T+ SV + + + VH A L D + N ++ Y +C
Sbjct: 398 MRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKC 457
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G ++ A VF D+IS +M+T Q +A+ LF +M +P+ L+
Sbjct: 458 GQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLL 517
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+ACT L + + G++ H ++I D NA++ YAKCG ++ A+ F+ + ER
Sbjct: 518 NACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGL--PERG 575
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
+ SW+ +I G HGHG++AL+ F +ML+EGV P+HIT TS+LSAC+HAGL+D+ +K F
Sbjct: 576 IVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFE 635
Query: 440 DMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--- 495
M + + +HYACM+D+LGRAG L +A +++ MP N +VWGALL A R+H
Sbjct: 636 SMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDP 695
Query: 496 --GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
G +AA LF LEPE +G VL++N YA++ W E+ K+R+ MK+ +KK A S +E
Sbjct: 696 ELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEI 755
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F D+ +P +++Y K+ + + AGY+P++ LHDV+ ++E +L++HS
Sbjct: 756 KDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHS 815
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
E+LAVAF +++ A ++V KNLR+C DCH AF++IS I R+II+RD NRFHHF GT
Sbjct: 816 ERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGT 875
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 876 CSCGDYW 882
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 151/535 (28%), Positives = 257/535 (48%), Gaps = 31/535 (5%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
P T G + L + +HS L SGL+ ++ Y+ P+ AR++F
Sbjct: 4 PETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG---FSNHLLTLYSRCRLPSAARAVF 60
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ I + S W++++ AY+NNG + L + MR G+ N + P VLK CA +
Sbjct: 61 DEIPDPCHVS--WSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAPD-- 115
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM----SVRDLVSWTV 181
+ G VH + T + D +V ALV +Y G D+ ++FDE R+ VSW
Sbjct: 116 VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
MI+AY + ++ +A+ +F++ G + V +A D+ + VHG +
Sbjct: 176 MISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTG 235
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
+ +D+ N++V MY++ G++E A VF+ M D++SWN+ ++G + +G AL L
Sbjct: 236 YEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLL 295
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
+M++S PN T ++ AC G+ LGR+ HG+++ + D + ++DMYAK G
Sbjct: 296 QMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHG 355
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD--HITFT 419
LD A +F D P R++ WN LI+G G + L F +M +EG+ D T
Sbjct: 356 FLDDARKVF-DFMP-RRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLA 413
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
S+L + + + I R+ A K+ + + ++D + G L A + K+
Sbjct: 414 SVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE---S 470
Query: 480 PNDSVWGALLLACRI----HGEIAANYLFQ-----LEPEHTGYFVLMSNIYAASN 525
+D + + + + HGE A Q LEP+ FVL S + A ++
Sbjct: 471 RSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDS---FVLSSLLNACTS 522
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 235/491 (47%), Gaps = 14/491 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN---SIHNDKSYSFLWNTMIR 83
Q+H+ + L++ A + + Y +G + AR +F+ + +++ + WNTMI
Sbjct: 121 QVHALAVATRLVHDVFVANALVAV-YGGFGMVDEARRMFDEYVGVGGERN-AVSWNTMIS 178
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS 143
AY N + + ++ M SG N + F V+ AC + + G+ VHG ++RTG+
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEK 238
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D + ALVDMY+K G + VF++M D+VSW I+ AL L + +
Sbjct: 239 DVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMK 298
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
GL+ + T+ SV A G + +HG+ + D + +V MYA+ G ++
Sbjct: 299 SSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLD 358
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS--DCKPNPVTALILVSA 321
AR VFD M +RDLI WN++++G +G+ E L LF M+ D N T ++ +
Sbjct: 359 DARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKS 418
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
+ R+ H + D+ + N ++D Y KCG LD A +F + ++
Sbjct: 419 TASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE--SRSDDII 476
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
S ++ HG A++ F QML +G++PD +S+L+AC+ ++G++ A +
Sbjct: 477 SSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHL 536
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL--LACRIHGEI 498
K +V +V + G + +A DM LP V W A++ LA HG+
Sbjct: 537 IKRQFTSDVFAGNALVYAYAKCGSIEDA-DMAFS-GLPERGIVSWSAMIGGLAQHGHGKR 594
Query: 499 AANYLFQLEPE 509
A + ++ E
Sbjct: 595 ALDLFHRMLDE 605
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 153/350 (43%), Gaps = 26/350 (7%)
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
TI S + G + +H + + + L N ++ +Y+RC AR VFD +
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEI 63
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
+SW+S++T Y NG +ALL F M+ N AL +V C + G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEF-ALPVVLKCA--PDVRFGA 120
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI--HPSERNVSSWNVLIAGY 390
+ H + + + D + NA++ +Y G +D A MF++ ERN SWN +I+ Y
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+ A+ F +M+ G +P+ F+ +++AC+ + ++ GR+ + + + +V
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV 240
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEH 510
+VDM + G + A + ++MP S W A + C HG L+ +
Sbjct: 241 FTANALVDMYSKLGDIEMAATVFEKMPAADVVS-WNAFISGCVTHGHDHRALELLLQMKS 299
Query: 511 TGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
+G L+ N++ S+ LK A G+ I GF
Sbjct: 300 SG---LVPNVFTLSSV---------------LKACAGAGAFNLGRQIHGF 331
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/635 (38%), Positives = 369/635 (58%), Gaps = 28/635 (4%)
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+S W +I+ YA++G +L ++ +R GIS + + FP +L+A + +H
Sbjct: 40 HSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLH 99
Query: 134 GDIIRTGFLSDSYVQAALVDMYAK----------------------CGQTDDGCKVFDEM 171
+IR GF D Y AL++MY+K + D K+FD M
Sbjct: 100 AAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRM 159
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
VRD+VSW +I Q EEAL + ++ +E L DS T+ S+ + +V K +
Sbjct: 160 PVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGK 219
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+HGYAI + F +D+ I +S++ MYA+C VE + F ++ RD ISWNS++ G +QNG
Sbjct: 220 EIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNG 279
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+ + L F M KP V+ ++ AC +L + LG++ H YII + + +
Sbjct: 280 RFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIAS 339
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
+++DMYAKCG++ A +FN I +R++ SW +I G MHGH A+ F +ML +GV
Sbjct: 340 SLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGV 399
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAF 470
KP ++ F ++L+ACSHAGL+DEG K F M + V P ++HYA + D+LGRAG L EA+
Sbjct: 400 KPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAY 459
Query: 471 DMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASN 525
D I M P SVW LL ACR H E N + ++P + G V+MSNIY+A+
Sbjct: 460 DFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQ 519
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
+WR+ KLR M+ GLKK A S IE G + F D+ +PY+ ++ + + + +++
Sbjct: 520 RWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQME 579
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
GY+ D + LHDV++E + +L HSE+LA+AFGI++ T ++V KN+RVC DCH+
Sbjct: 580 KEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHT 639
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
A +F++ I R+IIVRD +RFHHF+ G+CSC DYW
Sbjct: 640 AIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 91/229 (39%), Gaps = 16/229 (6%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ ++ +C L +L +Q+H+ + G + + + ++ Y G AR +FN I
Sbjct: 303 FSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKF-IASSLLDMYAKCGNIKMARYIFNKI 361
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
W +I A +GH ++ + L+ M G+ F VL AC+ L+ E
Sbjct: 362 EMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDE 421
Query: 129 GKVVHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS-WTVMITA- 185
G + R G AA+ D+ + G+ ++ M S W+ ++ A
Sbjct: 422 GWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAAC 481
Query: 186 -----YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
E AEK ++L G + V + ++ SA + D K
Sbjct: 482 RAHKNIELAEKVVNKILLV----DPGNMGAHVIMSNIYSAAQRWRDAAK 526
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/699 (36%), Positives = 404/699 (57%), Gaps = 51/699 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI--HNDKSYSFLWNTMIR 83
R++H L + L+N + LG+ ++ Y+ G A +F S+ N+ SY N ++
Sbjct: 397 RELHGHLVRN-LLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSY----NALLA 451
Query: 84 AYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL 142
Y G E LELY M+ GI + +TF +L CA+ +G+ +H +IR
Sbjct: 452 GYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 511
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
+ V+ LV MY++CG+ + ++F+ M+ R+ SW MI Y+Q + +EAL LF++
Sbjct: 512 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 571
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
Q G+ D ++ S+ S+ L D K + +H + + N E+ +Q +V MYA+CG++
Sbjct: 572 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSM 631
Query: 263 E-------------------------------KARLVFDMMEKRDLISWNSMLTGYIQNG 291
+ A+ +FD ME+R+ WNS+L GY G
Sbjct: 632 DYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKG 691
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN-MKIDATLR 350
E+ F EM SD + + +T + +V+ C+ L + + G + H II + L
Sbjct: 692 LKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLE 751
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++DMY+KCG + A +F++++ +N+ SWN +I+GY HG ++AL + +M ++G
Sbjct: 752 TALVDMYSKCGAITKARTVFDNMNG--KNIVSWNAMISGYSKHGCSKEALILYEEMPKKG 809
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEA 469
+ P+ +TF +ILSACSH GL++EG + F M + +++ + +HY CMVD+LGRAG L +A
Sbjct: 810 MYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDA 869
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAAS 524
+ +++MP+ P S WGALL ACR+H G +AA LF+L+P++ G +V+MSNIYAA+
Sbjct: 870 KEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAA 929
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
+W+EV +R+ MK KG+KK S IE +IQ FH + +P +E+Y + + ++
Sbjct: 930 GRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQS 989
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNY---HSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
K GY+PD S L +V+D E Y HSE+LA++ G+++L ++ ++V KNLR+C
Sbjct: 990 KGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICG 1049
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH+A +FIS I R+II RD NRFHHFE G CSC DYW
Sbjct: 1050 DCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/493 (30%), Positives = 250/493 (50%), Gaps = 13/493 (2%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYG---EPNTARSLF 65
Y L++ C N + IH+ + ++G N +L KI++ Y G + AR LF
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGY-NPDAYLMTKILMLYARSGCLDDLCYARKLF 132
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ + WNTMI AYA +E L LY MR SG S+ +TFP V+KAC +
Sbjct: 133 EEMPERNLTA--WNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMED 190
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
+ + + +++ G + +V ALVD YA+ G DD DE+ +V+W +I
Sbjct: 191 MGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAG 250
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y + EEA +F + + G+ D+ T S G L + VH I F D
Sbjct: 251 YVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 310
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ N+++ MYA+C + E VFD M +R+ ++WNS+++ Q G ++AL+LF MQ
Sbjct: 311 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 370
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
S K N ++ A L GR+ HG+++ + + D L +A++DMY+KCG ++
Sbjct: 371 SGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEE 430
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML-EEGVKPDHITFTSILSA 424
A +F + ERN S+N L+AGY G +ALE + M E+G++PD TFT++L+
Sbjct: 431 AHQVFRSL--LERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTL 488
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
C++ ++GR+ A + + ++ + +V M G L A ++ +M N
Sbjct: 489 CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYS 547
Query: 485 WGALLLACRIHGE 497
W +++ + +GE
Sbjct: 548 WNSMIEGYQQNGE 560
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 210/440 (47%), Gaps = 27/440 (6%)
Query: 69 HNDKSYSFLWNTMIRAY-ANNGHCVETLEL----------YSTMRRSGISSNSYTFPFVL 117
H + + L N +++ A+ GH T++L S + N + ++
Sbjct: 19 HYSRHFFLLPNPNSKSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPASDVNPLPYSSLI 78
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC---KVFDEMSVR 174
+ C ++ GK +H +I G+ D+Y+ ++ +YA+ G DD C K+F+EM R
Sbjct: 79 QDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPER 138
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV-----LK 229
+L +W MI AY + + E L L+ + + G SD T SV A + D+ L+
Sbjct: 139 NLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQ 198
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
+ V CN F + ++V YAR G ++ A D +E +++WN+++ GY++
Sbjct: 199 SSVVKAGLNCNLF-----VGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK 253
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
EA +FD M P+ T + C L SR G++ H +I K D +
Sbjct: 254 ILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFV 313
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
NA++DMYAKC D ++ +F+++ ERN +WN +I+ GH AL F +M E
Sbjct: 314 GNALIDMYAKCDDEESCLKVFDEM--GERNQVTWNSIISAEAQFGHFNDALVLFLRMQES 371
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
G K + SIL A + I +GR+ + + + ++ + +VDM + G + EA
Sbjct: 372 GYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEA 431
Query: 470 FDMIKQMPLPPNDSVWGALL 489
+ + + L N+ + ALL
Sbjct: 432 HQVFRSL-LERNEVSYNALL 450
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/661 (37%), Positives = 379/661 (57%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH + GL A ++ Y+ GE A ++F I + S WN +I
Sbjct: 203 RKIHGLMLKMGLDLDQFSANA-LVDMYSKAGEIEGAVAVFQDIAHPDVVS--WNAIIAGC 259
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ L L M+ SG N +T LKACA+ G+ +H +I+ SD
Sbjct: 260 VLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDL 319
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ LVDMY+KC DD + +D M +D+++W +I+ Y Q +A+ LF K E
Sbjct: 320 FAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSE 379
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ + T+ +V +V L + + +H +I + D + NS++ Y +C ++++A
Sbjct: 380 DIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEA 439
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+F+ DL+++ SM+T Y Q G EAL L+ +MQ++D KP+P L++AC L
Sbjct: 440 SKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANL 499
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H + I D N++++MYAKCG ++ A+ F++I R + SW+
Sbjct: 500 SAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEI--PNRGIVSWSA 557
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKL 444
+I GY HGHG++AL F+QML +GV P+HIT S+L AC+HAGL++EG++ F M
Sbjct: 558 MIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMF 617
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+KP +HYACM+D+LGR+G L EA +++ +P + VWGALL A RIH G+ A
Sbjct: 618 GIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKA 677
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A LF LEPE +G VL++NIYA++ W V K+R+ MK+ +KK S IE +
Sbjct: 678 AKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYT 737
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F DR + E+Y K++ + + AGY + +H+V+ ++E +L +HSEKLAVA
Sbjct: 738 FIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVA 797
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG++ P ++V KNLR+C DCH+ F+F+ I R+IIVRD NRFHHF+ G+CSC DY
Sbjct: 798 FGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDY 857
Query: 680 W 680
W
Sbjct: 858 W 858
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 195/351 (55%), Gaps = 6/351 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W++++ Y NG E L +++ M G+ N +TFP VLKAC+ + G+ VHG +
Sbjct: 50 WSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAV 109
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
TGF SD +V LV MYAKCG DD ++F + R++VSW + + Y Q+E EA+
Sbjct: 110 VTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVG 169
Query: 198 LFQKTQQEGLLSD--SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
LF++ + G++ + S++I+ A A Q GD+ + +HG + D N++V M
Sbjct: 170 LFKEMVRSGIMPNEFSISIILNACAGLQEGDL--GRKIHGLMLKMGLDLDQFSANALVDM 227
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y++ G +E A VF + D++SWN+++ G + + AL+L DEM+ S +PN T
Sbjct: 228 YSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTL 287
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ AC +G ++LGR+ H +I + D ++DMY+KC +D A ++ +
Sbjct: 288 SSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSM-- 345
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
++++ +WN LI+GY G A+ FS+M E + + T +++L + +
Sbjct: 346 PKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVA 396
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 193/359 (53%), Gaps = 5/359 (1%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I+ GF D ++ LV +Y+KC + K+ DE S D+VSW+ +++ Y Q
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EEAL++F + G+ + T SV A D+ + VHG A+ F D + N+
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MYA+CG ++ +R +F + +R+++SWN++ + Y+Q+ EA+ LF EM S PN
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+ I+++AC L LGRK HG ++ + +D NA++DMY+K G+++ A +F
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 372 DI-HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
DI HP +V SWN +IAG +H AL +M G +P+ T +S L AC+ G
Sbjct: 243 DIAHP---DVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ GR+ + + K+ ++ +VDM + + +A MP + W AL+
Sbjct: 300 KELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALI 357
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 31/283 (10%)
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ H ++I D +LRN ++ +Y+KC A + ++ SE +V SW+ L++GY
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDE--SSELDVVSWSSLLSGYVQ 59
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
+G +AL F++M GVK + TF S+L ACS ++ GRK + +
Sbjct: 60 NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA--ANYLFQLEPEH 510
+V M + G L ++ + + + N W A L +C + E+ A LF+ E
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGI-VERNVVSWNA-LFSCYVQSELCGEAVGLFK-EMVR 176
Query: 511 TGYFVLMSNIYAASNKWREVGKLRE-DMKNK--GLKKPAAFSVIEYGKDIQGFHTADRVN 567
+G +M N ++ S L+E D+ K GL +++ G D+ F V+
Sbjct: 177 SG---IMPNEFSISIILNACAGLQEGDLGRKIHGL-------MLKMGLDLDQFSANALVD 226
Query: 568 PYWKEVYKKVESMAVEIKMAGYMPDL--------SCALHDVED 602
Y K ++E AV + PD+ C LHD D
Sbjct: 227 MYSKA--GEIEG-AVAVFQDIAHPDVVSWNAIIAGCVLHDCND 266
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/717 (36%), Positives = 412/717 (57%), Gaps = 50/717 (6%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR--- 62
PS +G LL SC L ++QIH+ + S + N L L ++ T +A
Sbjct: 13 PSEKG----LLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYA 68
Query: 63 -SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
SLF+ I N + N ++R ++ TL LY +RR+G + ++FP +LKA +
Sbjct: 69 LSLFSHIPNPPTR--FSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVS 126
Query: 122 SNSLILEGKVVHGDIIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
S + G +HG + GF +D ++Q+AL+ MYA CG+ D +FD+MS RD+V+W
Sbjct: 127 KLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWN 186
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+MI Y Q + L L+++ + G D++ + +V SA G++ +A+H + N
Sbjct: 187 IMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDN 246
Query: 241 AFLEDLCIQNSIVAMYARCGN-------------------------------VEKARLVF 269
F IQ S+V MYA CG V+ AR +F
Sbjct: 247 GFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIF 306
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D M ++DL+ W++M++GY ++ Q EAL LF+EMQ P+ +T L ++SAC +G+
Sbjct: 307 DRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALV 366
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
+ H Y + + NA++DMYAKCG+L A +F ++ +NV SW+ +I
Sbjct: 367 QAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENM--PRKNVISWSSMINA 424
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKP 448
+ MHG A+ F +M E+ ++P+ +TF +L ACSHAGL++EG+K F+ M + + P
Sbjct: 425 FAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISP 484
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYL 503
+ +HY CMVD+ RA L +A ++I+ MP PPN +WG+L+ AC+ HGEI AA L
Sbjct: 485 QREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRL 544
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA 563
+LEP+H G V++SNIYA +W +VG +R+ MK+KG+ K A S IE ++ F A
Sbjct: 545 LELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMA 604
Query: 564 DRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIM 623
DR + E+YKK++++ ++K+ GY P S L D+E+E+++ ++ +HSEKLA+ +G++
Sbjct: 605 DRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLI 664
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
E+ +++ KNLR+C DCHS + +S ++R +I++RD RFHHF GG CSC DYW
Sbjct: 665 GERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/665 (36%), Positives = 383/665 (57%), Gaps = 11/665 (1%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L + R++H+ + +G A ++ Y+ G+ A +F + S WN
Sbjct: 218 LEAGRKVHAMVIRTGYDKDVFTANA-LVDMYSKLGDIRMAAVVFGKVPETDVVS--WNAF 274
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I +GH LEL M+ SG+ N +T +LKACA + G+ +HG +++
Sbjct: 275 ISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA 334
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
SD+Y+ LVDMYAK G DD KVFD + RDLV W +I+ + EAL LF +
Sbjct: 335 DSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCR 394
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
++EG + T+ +V + L + + VH A FL D + N ++ Y +C
Sbjct: 395 MRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDC 454
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+ A VF+ D+I++ SM+T Q +A+ LF EM P+P L++A
Sbjct: 455 LNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNA 514
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C L + + G++ H ++I D NA++ YAKCG ++ A+ F+ + E+ V
Sbjct: 515 CASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGL--PEKGVV 572
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SW+ +I G HGHG++AL+ F +M++E + P+HIT TS+L AC+HAGL+DE ++ F M
Sbjct: 573 SWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSM 632
Query: 442 TKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
++ ++ +HYACM+D+LGRAG L +A +++ MP N +VWGALL A R+H
Sbjct: 633 KEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPEL 692
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G +AA LF LEPE +G VL++N YA++ W +V K+R+ MK+ +KK A S +E
Sbjct: 693 GRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKD 752
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D+ +P +++Y K++ + + AGY+P++ LHDV+ ++E +L++HSE+
Sbjct: 753 KVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSER 812
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVAF +++ A ++V KNLR+C DCH+AF+FIS I R+II+RD NRFHHF G CS
Sbjct: 813 LAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACS 872
Query: 676 CNDYW 680
C DYW
Sbjct: 873 CRDYW 877
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 224/450 (49%), Gaps = 11/450 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
IH+ L SGL ++ Y+ P +AR +F+ I + S W++++ AY+
Sbjct: 25 HIHAHLLKSGLFAV---FRNHLLSFYSKCRLPGSARRVFDEIPDPCHVS--WSSLVTAYS 79
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NN + L + +MR + N + P VLK CA ++ G +H + TG D +
Sbjct: 80 NNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAMATGLGGDIF 136
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSV-RDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V ALV MY G D+ VFDE R+ VSW +++AY + ++ A+ +F +
Sbjct: 137 VANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWG 196
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + V +A D+ + VH I + +D+ N++V MY++ G++ A
Sbjct: 197 GVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMA 256
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+VF + + D++SWN+ ++G + +G AL L +M++S PN T ++ AC
Sbjct: 257 AVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGS 316
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G+ LGR+ HG+++ +N D + ++DMYAK G LD A+ +F+ I +R++ WN
Sbjct: 317 GAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWI--PQRDLVLWNA 374
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
LI+G +AL F +M +EG + T ++L + + I + R+ A KL
Sbjct: 375 LISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLG 434
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
+ ++D + CL A+ + ++
Sbjct: 435 FLSDSHVVNGLIDSYWKCDCLNYAYRVFEK 464
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 200/396 (50%), Gaps = 21/396 (5%)
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
P + + A+ SL L+G +H ++++G + + L+ Y+KC +VFDE+
Sbjct: 9 PLLTRYAATQSL-LQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPD 65
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
VSW+ ++TAY P +AL F+ + + + + V G +
Sbjct: 66 PCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGTQL 122
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRDLISWNSMLTGYIQNGQ 292
H A+ D+ + N++VAMY G V++AR+VFD +R+ +SWN +++ Y++N +
Sbjct: 123 HALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDR 182
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL--GRKFHGYIINSNMKIDATLR 350
S A+ +F EM +PN +V+ACT GSR L GRK H +I + D
Sbjct: 183 CSHAVKVFGEMVWGGVQPNEFGFSCVVNACT--GSRDLEAGRKVHAMVIRTGYDKDVFTA 240
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
NA++DMY+K GD+ A +F + E +V SWN I+G +HGH + ALE QM G
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKV--PETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA- 469
+ P+ T +SIL AC+ +G + GR+ M K + + +VDM + G L +A
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAK 358
Query: 470 --FDMIKQMPLPPNDSVWGALLLACRIHGEIAANYL 503
FD I Q L +W AL+ C HG A L
Sbjct: 359 KVFDWIPQRDL----VLWNALISGCS-HGAQHAEAL 389
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 238/502 (47%), Gaps = 8/502 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ +GL + + ++ Y +G + AR +F+ +++ + WN ++ AY
Sbjct: 121 QLHALAMATGLGGD-IFVANALVAMYGGFGFVDEARMVFDEAGCERN-TVSWNGLMSAYV 178
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
N C ++++ M G+ N + F V+ AC + + G+ VH +IRTG+ D +
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
ALVDMY+K G VF ++ D+VSW I+ + AL L + + G
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L+ + T+ S+ A G + +HG+ + D I +V MYA+ G ++ A+
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAK 358
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VFD + +RDL+ WN++++G Q +EAL LF M+ N T ++ + L
Sbjct: 359 KVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLE 418
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ R+ H D+ + N ++D Y KC L+ A +F H S ++ ++ +
Sbjct: 419 AISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEK-HGS-YDIIAFTSM 476
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I HG A++ F +ML +G+ PD +S+L+AC+ ++G++ A + K
Sbjct: 477 ITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF 536
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLF 504
+V +V + G + +A +P S W A++ LA HG+ A +
Sbjct: 537 MSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVS-WSAMIGGLAQHGHGKRALDVFH 595
Query: 505 QLEPEH-TGYFVLMSNIYAASN 525
++ EH + + M+++ A N
Sbjct: 596 RMVDEHISPNHITMTSVLCACN 617
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 151/335 (45%), Gaps = 27/335 (8%)
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+L+ +H + + + +N +++ Y++C AR VFD + +SW+S++T
Sbjct: 20 LLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTA 77
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y N +AL F M++ + N +++ G G + H + + + D
Sbjct: 78 YSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGTQLHALAMATGLGGD 134
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA++ MY G +D A +F++ ERN SWN L++ Y + A++ F +M
Sbjct: 135 IFVANALVAMYGGFGFVDEARMVFDEA-GCERNTVSWNGLMSAYVKNDRCSHAVKVFGEM 193
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
+ GV+P+ F+ +++AC+ + ++ GRK A + + +V +VDM + G +
Sbjct: 194 VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDI 253
Query: 467 YEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSNIYAASN 525
A + + +P D V W A + C +HG L+ + +G L+ N++ S+
Sbjct: 254 RMAAVVFGK--VPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG---LVPNVFTLSS 308
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
LK A G+ I GF
Sbjct: 309 I---------------LKACAGSGAFNLGRQIHGF 328
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/694 (36%), Positives = 396/694 (57%), Gaps = 56/694 (8%)
Query: 6 PSTEGFYDQLLKSCN---FLASLRQIHSSLTTSGLIN----QALHLGAKIIIKYTTYGEP 58
P++ +LL +C L SLR H+ L L++ A H K+I Y
Sbjct: 9 PTSGESLLRLLAACRAPAHLPSLRAAHARLLV--LLHPSHPSAAHANVKLIQAYAACSAL 66
Query: 59 NTARSLFNSIHND---KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS--SNSYTF 113
A ++ S D ++ + +N +IRA + + L L+++MR G + + YT+
Sbjct: 67 PLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTY 126
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
P LK+C+++ +L G +H + + + YV + + MY++CG+ +D +VFD M
Sbjct: 127 PLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPH 186
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
RD+VSW MI + + + A+ +F++ +G + D+ T+ + A+G
Sbjct: 187 RDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGN--------- 237
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
A+ ++ R VFD M+ ++LISWN+ML Y N
Sbjct: 238 ------------------------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEF 273
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
+A+ LF M+ + +P+ +T ++ C L + +G++ H I NM + L NA
Sbjct: 274 HVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENA 333
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
+MDMYA CG L A +F+ + S R+V SW +I+ YG HGHGR+A++ F +ML +G++
Sbjct: 334 LMDMYASCGCLKDAREIFDLM--SARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLE 391
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PD I F ++L+ACSHAGL+ +G+ F MT + + P+ +HY CMVD+LGRAGC+ EA+D
Sbjct: 392 PDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYD 451
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
I M + PN+ VWGALL ACRIH G +AA+ LF L PE TGY+VL+SN+YA + +
Sbjct: 452 FITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGR 511
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W +V +R M NKG+KK S++E G + FH DR +P + +Y K++ + +I+
Sbjct: 512 WADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRG 571
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY P++ LHDVE+ED+E L+ HSEKLA+AF ++N +P +++VT NLR C+DCH A
Sbjct: 572 MGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLA 631
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ IS I R+I+++D NR HH G CSC DYW
Sbjct: 632 AKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 176/435 (40%), Gaps = 56/435 (12%)
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDII---RTGFLSDSYVQAALVDMYAKCG 159
RS + ++ + +L AC + + + + H ++ S ++ L+ YA C
Sbjct: 5 RSHLPTSGESLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACS 64
Query: 160 QTDDGCKVF-----DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG--LLSDSV 212
V D S V + V+I A + +AL+LF + G D
Sbjct: 65 ALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHY 124
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
T + D+L +H ++ + +S ++MY+RCG E A VFD M
Sbjct: 125 TYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGM 184
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
RD++SWN+M+ G+ + G A+ +F +
Sbjct: 185 PHRDVVSWNAMIAGFARVGLFDRAIEVFKQF----------------------------- 215
Query: 333 KFHGYIINSNMKIDATLRNAVMDM-YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ +M T+ + M AK D+ +F+++ E + SWN ++A Y
Sbjct: 216 ----VVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKE--LISWNAMLAVYA 269
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
+ KA+E F M ++ V+PD IT ++L C G++ + + ++ P +
Sbjct: 270 NNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLL 329
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGE-IAANYLFQ---- 505
++DM GCL +A ++ M D + W +++ A HG A LF+
Sbjct: 330 LENALMDMYASCGCLKDAREIFDLM--SARDVISWTSIISAYGKHGHGREAVDLFEKMLG 387
Query: 506 --LEPEHTGYFVLMS 518
LEP+ + +++
Sbjct: 388 QGLEPDSIAFVAVLA 402
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/620 (38%), Positives = 381/620 (61%), Gaps = 28/620 (4%)
Query: 78 WNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILE---GKVVH 133
WN+M+RA+ N+ L+ Y+ M RS + +TFP +LK CA L+LE GKV+H
Sbjct: 46 WNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA---LLLEFKVGKVLH 102
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G +++ SD Y++ L++MYA CG +F+ M R+ V WT MI+ Y + P
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY------AICNAFLEDLC 247
EAL+L++K +++G D VT+ ++ SA +L D+ +H + IC
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV------ 216
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-S 306
+ +++V MYA+CG+++ AR VFD + +D+ +W++++ GY++N +++EAL LF E+ S
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ +PN VT L ++SAC LG + GR H YI + +L N+++DM++KCGD+D A
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+ +F+ + S +++ SWN ++ G +HG GR+AL F M ++PD ITF +L+ACS
Sbjct: 337 KRIFDSM--SYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACS 394
Query: 427 HAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
HAGL+ EG+K F ++ L V+ + +HY CMVD+L RAG L EA + I+ MPL P+ ++W
Sbjct: 395 HAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIW 454
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
G++L ACR++ GE AA L +LEP + G ++L+SNIYA W EV K+RE M K
Sbjct: 455 GSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEK 514
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G++K S + F D +P E+ + + ++K+ GY+ D S L ++
Sbjct: 515 GIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNI 574
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+D +E ++ HSEKLA+ +G++ + + KNLRVC+DCH+ + +S IY+R+I +
Sbjct: 575 DDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITL 634
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD NRFHHF+ G+CSC DYW
Sbjct: 635 RDRNRFHHFKDGSCSCRDYW 654
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 198/385 (51%), Gaps = 13/385 (3%)
Query: 12 YDQLLKSCNFLASLR--QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI- 68
+ LLK C L + ++ +++ L++ ++ Y G+ +AR LF +
Sbjct: 82 FPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMG 141
Query: 69 HNDKSYSFLWNTMIRAYANNGHCV-ETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
H +K +W +MI Y N HC E L LY M G S + T ++ ACA +
Sbjct: 142 HRNK---VVWTSMISGYMKN-HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLG 197
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +H I + + +ALV+MYAKCG +VFD++S +D+ +W+ +I Y
Sbjct: 198 VGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYV 257
Query: 188 QAEKPEEALILFQKTQ-QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ + EAL LF++ + + VTI++V SA QLGD+ + VH Y +
Sbjct: 258 KNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSV 317
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ NS++ M+++CG+++ A+ +FD M +DLISWNSM+ G +G EAL F MQ +
Sbjct: 318 SLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTT 377
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS--NMKIDATLRNAVMDMYAKCGDLD 364
D +P+ +T + +++AC++ G Q G+K Y I + +++ + ++D+ + G L
Sbjct: 378 DLQPDEITFIGVLTACSHAGLVQEGKKLF-YEIEALYGVRLKSEHYGCMVDLLCRAGLLA 436
Query: 365 TAENMFNDIHPSERNVSSWNVLIAG 389
A F + P + + + W ++
Sbjct: 437 EARE-FIRVMPLQPDGAIWGSMLGA 460
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 4/225 (1%)
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLG 326
VF D+++WNSML ++ + AL + EM + S P+ T L+ C L
Sbjct: 34 VFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
++G+ HG ++ + D + +++MYA CGDL +A +F + RN W +
Sbjct: 94 EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERM--GHRNKVVWTSM 151
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I+GY + +AL + +M E+G PD +T +++SAC+ + G K + + ++ +
Sbjct: 152 ISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
K + +V+M + G L A + Q+ + W AL+
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQVFDQLS-DKDVYAWSALIFG 255
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/615 (39%), Positives = 373/615 (60%), Gaps = 12/615 (1%)
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISS-NSYTFPFVLKACASNSLILEGKV--- 131
F N ++ YA G + + ++ +++ I S N+ VL +L L G++
Sbjct: 294 FSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ 353
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +++ SD +V LVDMY+KC +D F+ + +DL++W +I+ Y Q +
Sbjct: 354 LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE 413
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EAL LF + +EG+ + T+ ++ + L V + VHG ++ + F D+ + NS
Sbjct: 414 DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNS 473
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ Y +C +VE A +F+ DL+S+ SM+T Y Q GQ EAL LF EMQ+ + KP+
Sbjct: 474 LIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPD 533
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
L++AC L + + G++ H +I+ +D N++++MYAKCG +D A F+
Sbjct: 534 RFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 593
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ +ER + SW+ +I G HGHGR+AL+ F+QML+EGV P+HIT S+L AC+HAGL+
Sbjct: 594 EL--TERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLV 651
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
E + F M +L KP +HYACM+D+LGRAG + EA +++ +MP N SVWGALL
Sbjct: 652 TEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLG 711
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
A RIH G AA LF LEPE +G VL++NIYA++ KW V ++R M++ +KK
Sbjct: 712 AARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKE 771
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F DR + +E+Y K++ ++ + AGY+P + LHDVE ++
Sbjct: 772 PGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEK 831
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +L +HSEKLAVAFG++ A ++V KNLRVC DCH+AF++I I R+IIVRD NR
Sbjct: 832 ELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINR 891
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G+CSC DYW
Sbjct: 892 FHHFKDGSCSCGDYW 906
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 221/454 (48%), Gaps = 35/454 (7%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +LL C SLR QIH+ +T SGL + + +I Y+ AR L +
Sbjct: 59 YSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDP-SIRNHLINLYSKCRXFGYARKLVDES 117
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W+ +I YA NG L + M G+ N +TF VLKAC+ +
Sbjct: 118 SEPDLVS--WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRI 175
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK VHG ++ +GF D +V LV MYAKC + D ++FDE+ R++VSW + + Y Q
Sbjct: 176 GKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ EA+ LF + G+ + ++ S+ +A L D + + +HGY I + D
Sbjct: 236 XDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFS 295
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
N++V MYA+ G++ A VF+ +++ D++SWN+++ G + + +AL L +M+
Sbjct: 296 ANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK---- 351
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
R+ H ++ +M+ D + ++DMY+KC L+ A
Sbjct: 352 -----------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARM 388
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
FN + E+++ +WN +I+GY + +AL F +M +EG+ + T ++IL + +
Sbjct: 389 AFNLL--PEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGL 446
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
++ R+ K ++ ++D G+
Sbjct: 447 QVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGK 480
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 166/314 (52%), Gaps = 2/314 (0%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
+T + + + + + S ++ +L C + + G +H I ++G D ++ L+
Sbjct: 39 QTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLI 98
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
++Y+KC K+ DE S DLVSW+ +I+ Y Q AL+ F + G+ +
Sbjct: 99 NLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEF 158
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
T SV A + D+ + VHG + + F D+ + N++V MYA+C ++ +FD +
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
+R+++SWN++ + Y+Q EA+ LF EM S KPN + +V+ACT L G+
Sbjct: 219 PERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGK 278
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
HGY+I D NA++DMYAK GDL A ++F I + ++ SWN +IAG +
Sbjct: 279 IIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKI--KQPDIVSWNAVIAGCVL 336
Query: 393 HGHGRKALEFFSQM 406
H H +ALE QM
Sbjct: 337 HEHHEQALELLGQM 350
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 143/268 (53%), Gaps = 13/268 (4%)
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
+H + + +D I+N ++ +Y++C AR + D + DL+SW+++++GY QNG
Sbjct: 78 IHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGL 137
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
AL+ F EM K N T ++ AC+ + ++G++ HG ++ S + D + N
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANT 197
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++ MYAKC + ++ +F++I ERNV SWN L + Y +A+ F +M+ G+K
Sbjct: 198 LVVMYAKCDEFLDSKRLFDEI--PERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255
Query: 413 PDHITFTSILSACSHAGLID--EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA- 469
P+ + +S+++AC+ GL D G+ + KL + +VDM + G L +A
Sbjct: 256 PNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 470 --FDMIKQMPLPPNDSVWGALLLACRIH 495
F+ IKQ P+ W A++ C +H
Sbjct: 314 SVFEKIKQ----PDIVSWNAVIAGCVLH 337
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/653 (37%), Positives = 381/653 (58%), Gaps = 52/653 (7%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W ++ YA NG +++ ++ M GI ++ +L A + + + +HG ++
Sbjct: 306 WVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVV 365
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R+GF S+ +V A+L+++Y+KCG D K+F M VRD+V W+ MI AY + EAL
Sbjct: 366 RSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALE 425
Query: 198 LFQKTQQ--EGLLS-------------DSVTIVSVASAV----------------GQLGD 226
+F + Q +G+ S ++T ++A+ + G +
Sbjct: 426 IFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWE 485
Query: 227 VLKAQAVHGYAIC--NAFLEDLCIQNSIVA----MYARCGNVEKARLVFDMMEKRDLISW 280
+ + N F L + I+ MY ++ A +VF+ + W
Sbjct: 486 IFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLW 545
Query: 281 NSMLTGYIQNGQASEALLLFDEM-------QNSDCKPNPVTALILVSACTYLGSRQLGRK 333
N M+ G+ +G+ +L L+ +M NS PN V+ L ++ AC LG+ + G
Sbjct: 546 NVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEW 605
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
FH Y+I + + D + A+MDMY+KCG LD A +F++ + +++ W+ +IA YG+H
Sbjct: 606 FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDET--AGKDLVCWSAMIASYGIH 663
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKH 452
GHGRKA++ F QM++ GV+P H+TFT +LSACSH+GL++EG+ F MT+ + ++ +
Sbjct: 664 GHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSN 723
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLE 507
YACMVD+LGRAG L EA D+I+ MP+ P+ S+WG+LL ACRIH E A++LF L+
Sbjct: 724 YACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLD 783
Query: 508 PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN 567
P H GY VL+SNIYAA ++W EV K+R+ M +G K FS++EY + F DR +
Sbjct: 784 PVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSH 843
Query: 568 PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTP 627
P W+++Y K+E +A +K GY+P LHD+E+E +E L+YHSE+LA+AFG++N +P
Sbjct: 844 PQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSP 903
Query: 628 EAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++TKNLR+C DCH+A + IS I R I+VRD +RFH FE G CSC DYW
Sbjct: 904 GTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 222/485 (45%), Gaps = 77/485 (15%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L ++CN S+ Q+HS + +G+++ K+ Y AR +F+ + +
Sbjct: 10 LFQACNNGRSVSQLHSQVFKTGILHDTF-FATKLNSLYAKCASLQAARKVFDETPHPNVH 68
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVH 133
LWN+ +R+Y ETL L+ M +G + +++T P LKACA ++ GKV+H
Sbjct: 69 --LWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126
Query: 134 GDIIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
G + + SD +V +ALV++Y+KCGQ + KVF+E D V WT M+T Y+Q P
Sbjct: 127 GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDP 186
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EEAL LF + + + F DL + NS+
Sbjct: 187 EEALALFSQM----------------------------------VMMDCFDGDLPLVNSL 212
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ +YA+ G + A +F M ++D+ISW++M+ Y N A+EAL LF EM +PN
Sbjct: 213 LNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNS 272
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT + + AC + + G+K H +
Sbjct: 273 VTVVSALQACAVSRNLEEGKKIHKIAV--------------------------------- 299
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
++V SW L++GY +G K++ F ML +G++PD + IL+A S G+
Sbjct: 300 ----WKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQ 355
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
+ + + V A ++++ + G L +A + K M + + +W +++ A
Sbjct: 356 QALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSSMIAAY 414
Query: 493 RIHGE 497
IHG
Sbjct: 415 GIHGR 419
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 13/248 (5%)
Query: 47 KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR--- 103
K I Y ++ + A +F I N SFLWN MIR +A +G + +LELYS M
Sbjct: 516 KFAIMYVSFNRIDAASIVFEDIPN--PCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGL 573
Query: 104 ----SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
SG+ N + VL AC + + +G+ H +I+TGF D V A++DMY+KCG
Sbjct: 574 KPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCG 633
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
D +FDE + +DLV W+ MI +Y +A+ LF + + G+ VT V S
Sbjct: 634 SLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLS 693
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQN--SIVAMYARCGNVEKA-RLVFDMMEKRD 276
A G +L+ ++ + F+ + N +V + R G + +A L+ +M + D
Sbjct: 694 ACSHSG-LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPD 752
Query: 277 LISWNSML 284
W S+L
Sbjct: 753 ASIWGSLL 760
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 258/680 (37%), Positives = 398/680 (58%), Gaps = 16/680 (2%)
Query: 10 GFYDQLLKSCNF---LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
G Y LL+ C L R+IH + T+G L + ++ Y + + A +F
Sbjct: 146 GDYACLLQLCGENLDLKKGREIHGLIITNGF-ESNLFVMTAVMSLYAKCRQIDNAYKMFE 204
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ + S W T++ YA NGH L+L M+ +G +S T +L A A +
Sbjct: 205 RMQHKDLVS--WTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKAL 262
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
G+ +HG R+GF S V AL+DMY KCG VF M + +VSW MI
Sbjct: 263 RIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGC 322
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q + EEA F K EG + VT++ V A LGD+ + VH ++
Sbjct: 323 AQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNV 382
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ NS+++MY++C V+ A +F+ +EK + ++WN+M+ GY QNG EAL LF MQ+
Sbjct: 383 SVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQ 441
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
K + T + +++A + + HG + + M + + A++DMYAKCG + TA
Sbjct: 442 GIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTA 501
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F+ + ER+V +WN +I GYG HG G++ L+ F++M + VKP+ ITF S++SACS
Sbjct: 502 RKLFDMMQ--ERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACS 559
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+G ++EG F M + ++P + HY+ MVD+LGRAG L +A++ I++MP+ P SV
Sbjct: 560 HSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVL 619
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GA+L AC+IH GE AA LF+L+P+ GY VL++NIYA+++ W +V K+R M++K
Sbjct: 620 GAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDK 679
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
GL K S +E +I F++ +P K++Y +E++ EIK AGY+PD ++HDV
Sbjct: 680 GLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPD-SIHDV 738
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E++ ++ +L+ HSE+LA+AFG++N +P + + KNLRVC DCH ++IS + R+IIV
Sbjct: 739 EEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIV 798
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD RFHHF+ G+CSC DYW
Sbjct: 799 RDLRRFHHFKNGSCSCGDYW 818
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 272/741 (36%), Positives = 408/741 (55%), Gaps = 64/741 (8%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M+RLG + + + +LK+C + SLR +H+ + +GL + + I+ Y G
Sbjct: 118 MQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGL-GSNVFICNSIVAMYGRCG 176
Query: 57 EPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTMRRS---GISSNSYT 112
+ A +F+ + K + WN+++ AY G L + M + ++ T
Sbjct: 177 ALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAIT 236
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
+L ACAS + GK VHG +R G + D +V ALV MYAKC + ++ KVF+ +
Sbjct: 237 LVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIK 296
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQE--------------------------- 205
+D+VSW M+T Y Q + AL LF+ Q+E
Sbjct: 297 KKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALD 356
Query: 206 --------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF-------LEDLCIQN 250
GL + VT+ S+ S +G +L + H Y I N +DL + N
Sbjct: 357 VFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLN 416
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRD--LISWNSMLTGYIQNGQASEALLLFDEM--QNS 306
++ MYA+C + AR +FD +E +D +++W M+ GY Q+G+A++AL LF ++ Q +
Sbjct: 417 GLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKT 476
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDT 365
KPN T + AC LG +LGR+ H Y + N N + N ++DMY+K GD+D
Sbjct: 477 SLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDA 536
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F+++ RNV SW L+ GYGMHG G +AL F QM + G D ITF +L AC
Sbjct: 537 ARAVFDNM--KLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYAC 594
Query: 426 SHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SH+G++D+G F DM K + P +HYACMVD+LGRAG L EA ++IK M + P V
Sbjct: 595 SHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVV 654
Query: 485 WGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W ALL A RIH GE AA+ L +L E+ G + L+SN+YA + +W++V ++R MK+
Sbjct: 655 WVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKH 714
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
G++K S I+ K F DR +P +++Y + + IK GY+P S ALHD
Sbjct: 715 TGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHD 774
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
V+DE++ +L HSEKLAVA+GI+ P +++ KNLR+C DCHSA +IS I +I+
Sbjct: 775 VDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIV 834
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
+RD++RFHHF+ G+CSC YW
Sbjct: 835 LRDSSRFHHFKKGSCSCRSYW 855
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/535 (29%), Positives = 259/535 (48%), Gaps = 58/535 (10%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQ-ALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
LL+ C L + + H + G + +GA Y G A SL + S
Sbjct: 36 LLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGA-----YIECGASAEAVSLLQRLIPSHS 90
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F WN +IR G +TL Y M+R G + YTFPFVLKAC + G VH
Sbjct: 91 TVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVH 150
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM---SVRDLVSWTVMITAYEQAE 190
+ G S+ ++ ++V MY +CG DD ++FDE+ + D+VSW ++ AY Q
Sbjct: 151 AIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGG 210
Query: 191 KPEEAL-ILFQKTQQEGL--LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ AL I F+ L D++T+V++ A + + + VHG+++ N ++D+
Sbjct: 211 QSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVF 270
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N++V+MYA+C + +A VF+ ++K+D++SWN+M+TGY Q G AL LF MQ D
Sbjct: 271 VGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEED 330
Query: 308 CK-----------------------------------PNPVTALILVSACTYLGSRQLGR 332
K PN VT L+S C +G+ G+
Sbjct: 331 IKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGK 390
Query: 333 KFHGYIINSNMKI-------DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ H Y+I + + + D + N ++DMYAKC A ++F+ I ++NV +W V
Sbjct: 391 QTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTV 450
Query: 386 LIAGYGMHGHGRKALEFFSQMLEE--GVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
+I GY HG AL+ F+Q+ ++ +KP+ T + L AC+ G + GR+ A +
Sbjct: 451 MIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALR 510
Query: 444 LSVKPEVKHYA-CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ EV + C++DM ++G + A + M L N W +L+ +HG
Sbjct: 511 NENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKL-RNVVSWTSLMTGYGMHGR 564
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 188/385 (48%), Gaps = 23/385 (5%)
Query: 92 VETLELYSTMRRSGISSNSYTFPFV--LKACASNSLILEGKVVHGDIIRTGFLSDSYVQA 149
+ ++ YST +++ T P + L+ C + ++ K+ H I GF ++ + A
Sbjct: 15 ITSVHFYSTF-----TTSPPTIPLISLLRQCKT---LINAKLAHQQIFVHGF-TEMFSYA 65
Query: 150 ALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
V Y +CG + + + + S + W +I + ++ L + + Q+ G
Sbjct: 66 --VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGW 123
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
L D T V A G++ + +VH N ++ I NSIVAMY RCG ++ A
Sbjct: 124 LPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQ 183
Query: 268 VFDMMEKR---DLISWNSMLTGYIQNGQASEALLLFDEMQNS---DCKPNPVTALILVSA 321
+FD + +R D++SWNS+L Y+Q GQ+ AL + M N +P+ +T + ++ A
Sbjct: 184 MFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPA 243
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C + + Q G++ HG+ + + + D + NA++ MYAKC ++ A +F I +++V
Sbjct: 244 CASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGI--KKKDVV 301
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SWN ++ GY G AL F M EE +K D IT++++++ + G E F M
Sbjct: 302 SWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM 361
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCL 466
++P V A ++ G L
Sbjct: 362 QLYGLEPNVVTLASLLSGCASVGAL 386
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/671 (37%), Positives = 390/671 (58%), Gaps = 12/671 (1%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+ S + L ++ +H +G I+ L +G +I Y G + AR +F+ + + S
Sbjct: 433 IASTSALEWVKVVHKHAEEAGFISD-LRIGNALIHMYAKCGSIDDARLVFDGMCDRDVIS 491
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
WN M+ A NG E ++ M++ G+ +S T+ +L S + VH
Sbjct: 492 --WNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKH 549
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+ TG +SD V +A + MY +CG DD +FD++SVR + +W MI Q EA
Sbjct: 550 AVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREA 609
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
L LF + Q+EG + D+ T +++ SA + + VH +A +A L DL + N++V
Sbjct: 610 LSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHAT-DAGLVDLRVGNALVHT 668
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y++CGNV+ A+ VFD M +R++ +W M+ G Q+G +A F +M P+ T
Sbjct: 669 YSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTY 728
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ ++SAC G+ + ++ H + +++ + D + NA++ MYAKCG +D A ++F+D+
Sbjct: 729 VSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-- 786
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
ER+V SW V+I G HG G +AL+FF +M EG KP+ ++ ++L+ACSHAGL+DEGR
Sbjct: 787 VERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGR 846
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F MT+ ++P ++HY CMVD+LGRAG L EA I MP+ P+D+ WGALL AC
Sbjct: 847 RQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVT 906
Query: 495 HG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
+G E AA +L+P+ +VL+SNIYAA+ KW + +R M+ KG++K S
Sbjct: 907 YGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRS 966
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE I F D +P KE+Y ++ + +K GY+PD L + + E +E L
Sbjct: 967 WIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQAL 1026
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+ +G+M+ + ++V KNLRVC+DCH+A +FIS I R+I+ RDA RFHHF
Sbjct: 1027 CSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHF 1086
Query: 670 EGGTCSCNDYW 680
+ G CSC DYW
Sbjct: 1087 KDGVCSCGDYW 1097
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 157/512 (30%), Positives = 269/512 (52%), Gaps = 16/512 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H + SG+ Q L++ K++ Y G AR +F+ + Y +W TMI Y
Sbjct: 138 KQVHVCIIKSGM-EQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIY--IWTTMIGGY 194
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A GH + + +Y MR+ N T+ +LKAC + GK +H II++GF SD
Sbjct: 195 AEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDV 254
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V+ ALV+MY KCG +D +FD+M R+++SWTVMI + +EA LF + Q+E
Sbjct: 255 RVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQRE 314
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G + +S T VS+ +A G + + VH +A+ DL + N++V MYA+ G+++ A
Sbjct: 315 GFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDA 374
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R+VFD M +RD+ SW M+ G Q+G+ EA LF +MQ + C PN T L +++A
Sbjct: 375 RVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIA 434
Query: 326 GSRQLG--RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ L + H + + D + NA++ MYAKCG +D A +F+ + +R+V SW
Sbjct: 435 STSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM--CDRDVISW 492
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N ++ G +G G +A F QM +EG+ PD T+ S+L+ ++ + +
Sbjct: 493 NAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVE 552
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAAN 501
+ + + + + M R G + +A + ++ + + + W A++ A + G A +
Sbjct: 553 TGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSV-RHVTTWNAMIGGAAQQRCGREALS 611
Query: 502 YLFQLE-----PEHTGYF-VLMSNIYAASNKW 527
Q++ P+ T + +L +N+ + +W
Sbjct: 612 LFLQMQREGFIPDATTFINILSANVDEEALEW 643
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 218/427 (51%), Gaps = 46/427 (10%)
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+ GI+ +S+++ +L+ C IL K VH II++G + YV L+ +Y +CG+
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+VFD++ +++ WT MI Y + E+A+ ++ K +QE + +T +S+ A
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
++ + +H + I + F D+ ++ ++V MY +CG++E A+L+FD M +R++ISW
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ G G+ EA LF +MQ PN T + +++A G+ + ++ H + +N+
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ +D + NA++ MYAK G +D A +F+ + +ER++ SW V+I G HG G++A
Sbjct: 351 LALDLRVGNALVHMYAKSGSIDDARVVFDGM--TERDIFSWTVMIGGLAQHGRGQEAFSL 408
Query: 403 FSQMLEEGVKPDHITFTSILSACS---------------HA------------------- 428
F QM G P+ T+ SIL+A + HA
Sbjct: 409 FLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMY 468
Query: 429 ---GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP---LPPND 482
G ID+ R F M +V + M+ L + GC +EAF + QM L P+
Sbjct: 469 AKCGSIDDARLVFDGMC----DRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDS 524
Query: 483 SVWGALL 489
+ + +LL
Sbjct: 525 TTYLSLL 531
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 187/349 (53%), Gaps = 15/349 (4%)
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
++A+ + + Q+G+ DS + V++ + D+L A+ VH I + ++L + N +
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ +Y RCG ++ AR VFD + K+++ W +M+ GY + G A +A+ ++D+M+ +PN
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+T L ++ AC + + G+K H +II S + D + A+++MY KCG ++ A+ +F+
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ ERNV SW V+I G +G G++A F QM EG P+ T+ SIL+A + AG ++
Sbjct: 280 M--VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALL 489
++ + + +++ +V M ++G + +A FD + + + + G L
Sbjct: 338 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLA 397
Query: 490 LACRIHGEIAANYLFQLE-----PEHTGYFVLMSNIYAASN---KWREV 530
R G+ A + Q++ P T Y +++ AS +W +V
Sbjct: 398 QHGR--GQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKV 444
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/675 (36%), Positives = 390/675 (57%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C +L Q+HS + +G+ + + GA + + Y + TA +F + +
Sbjct: 320 LLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL-YVNCSDIKTAHEMFLTAQTE 378
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
LWN M+ A+ + E+ ++ M+ G+ N +T+P +L+ C S + G+
Sbjct: 379 NV--VLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQ 436
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I+TGF + YV + L+DMYAK G+ D + ++ D+VSWT +I+ Y Q
Sbjct: 437 IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNL 496
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EAL F++ G+ SD++ S SA + + + + +H + + + EDL I N+
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNA 556
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V++YARCG +++A L F+ ++ +D ISWN +++G+ Q+G +AL +F +M + + +
Sbjct: 557 LVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEAS 616
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T VSA + + + G++ H II D + NA++ YAKCG ++ A F
Sbjct: 617 FFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFC 676
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ E+N SWN +I GY HG+G +A+ F +M + G P+H+TF +LSACSH GL+
Sbjct: 677 EM--PEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLV 734
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+G F M+K + P+ HYAC+VD++ RAG L A I++MP+ P+ ++W LL
Sbjct: 735 TKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLS 794
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC +H GE AA +L +LEPE + +VL+SN+YA S KW + R+ M+N+G+KK
Sbjct: 795 ACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKE 854
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F+ DR++P ++Y+ + + + GY D L+DVE E +
Sbjct: 855 PGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQK 914
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ + HSEKLA+ FG+++L+ + V KNLRVC DCHS +F+S I R IIVRDA R
Sbjct: 915 DPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYR 974
Query: 666 FHHFEGGTCSCNDYW 680
FHHFEGG CSC DYW
Sbjct: 975 FHHFEGGICSCKDYW 989
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 258/527 (48%), Gaps = 16/527 (3%)
Query: 8 TEGFYDQLLKSCNF----LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
TE + +L++C+ + QIH+ + GL+ + + +I Y G +AR
Sbjct: 110 TEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPI-ISNPLIGLYAKNGLIISARK 168
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+++ S S W MI ++ NG+ E + L+ M +GI Y F VL C
Sbjct: 169 VFDNLCTKDSVS--WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKI 226
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
L G+ +H + + G ++YV ALV +Y++ KVF +M +D VS+ +I
Sbjct: 227 KLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLI 286
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
+ Q + AL LF K +++ L D VT+ S+ SA G + K + +H Y I
Sbjct: 287 SGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGIS 346
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
D+ ++ +++ +Y C +++ A +F + +++ WN ML + + SE+ +F +M
Sbjct: 347 SDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQM 406
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
Q PN T ++ CT +G+ LG + H +I + + + + + ++DMYAK G L
Sbjct: 407 QIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKL 466
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
DTA + + +E +V SW LI+GY H +AL+ F +ML G++ D+I F+S +S
Sbjct: 467 DTAHVILRTL--TEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAIS 524
Query: 424 ACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
AC+ +++GR+ A ++ +V + R G + EA+ ++ + DS
Sbjct: 525 ACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAY--LEFEKIDAKDS 582
Query: 484 V-WGALL--LACRIHGEIAANYLFQLEPE--HTGYFVLMSNIYAASN 525
+ W L+ A + E A Q+ +F S + AA+N
Sbjct: 583 ISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAAN 629
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 224/470 (47%), Gaps = 9/470 (1%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L +++H + G N+++ L K++ Y G+ + +F + N S W+ +
Sbjct: 26 LVECKKLHGKILKLGFGNESV-LCNKLVDVYFALGDLDGVVKVFEDMPNRSVRS--WDKI 82
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL-ILEGKVVHGDIIRTG 140
I + L+L+S M +S +F VL+AC+ + + I + +H II G
Sbjct: 83 ISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHG 142
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
L + L+ +YAK G KVFD + +D VSW MI+ + Q EEA+ LF
Sbjct: 143 LLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFC 202
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ G+ SV S ++ + +H + + N++V +Y+R
Sbjct: 203 EMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMP 262
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
N A VF M+ +D +S+NS+++G Q G + AL LF +M+ KP+ VT L+S
Sbjct: 263 NFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLS 322
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
AC G+ G + H Y+I + + D + A++D+Y C D+ TA MF + NV
Sbjct: 323 ACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF--LTAQTENV 380
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
WNV++ +G + ++ F QM +G+ P+ T+ SIL C+ G +D G +
Sbjct: 381 VLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQ 440
Query: 441 MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
+ K + V + ++DM + G L A +++ L +D V W AL+
Sbjct: 441 VIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILR--TLTEDDVVSWTALI 488
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/568 (24%), Positives = 265/568 (46%), Gaps = 51/568 (8%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M GI +N T+ ++L C ++ ++E K +HG I++ GF ++S + LVD+Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
D KVF++M R + SW +I+ + + + L LF +E + ++ SV A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 221 V-GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
G + A+ +H IC+ L I N ++ +YA+ G + AR VFD + +D +S
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
W +M++G+ QNG EA+ LF EM + P P ++S CT + +G + H +
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
++ + NA++ +Y++ + +AE +F+ + ++ S+N LI+G G A
Sbjct: 241 KYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQ--SKDEVSFNSLISGLAQQGFSDGA 298
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
LE F++M + +KPD +T S+LSAC+ G + +G + + + K + ++ ++D+
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358
Query: 460 -------------------------------LGRAGCLYEAFDMIKQMP---LPPNDSVW 485
G+ L E+F + +QM L PN +
Sbjct: 359 YVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTY 418
Query: 486 GALLLACRIHGEIAANYLFQLEPEHTGYFVLMSNIYAAS---NKWREVGKLREDMKNKGL 542
++L C G + + TG+ N+Y S + + + GKL D + L
Sbjct: 419 PSILRTCTSVGALDLGEQIHTQVIKTGF---QFNVYVCSVLIDMYAKHGKL--DTAHVIL 473
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS-CALHDVE 601
+ V+ + I G+ + K +K++ + ++ G+ +S CA
Sbjct: 474 RTLTEDDVVSWTALISGYAQHNLFAEALKH-FKEMLNRGIQSDNIGFSSAISACAGIQAL 532
Query: 602 DEDRE-HMLNY---HSEKLAVAFGIMNL 625
++ R+ H +Y +SE L++ +++L
Sbjct: 533 NQGRQIHAQSYVSGYSEDLSIGNALVSL 560
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/675 (36%), Positives = 388/675 (57%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C + L +Q+HS L +G+ + G+ + + Y G+ TA +FN D
Sbjct: 251 LLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDL-YVKCGDIETAHDIFNL--GD 307
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
++ LWN M+ AY ++ E++ M+ +GI N +T+P +L+ C I G+
Sbjct: 308 RTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQ 367
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ GF SD YV L+DMY+K G D K+ + + RD+VSWT MI Y Q +
Sbjct: 368 IHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDF 427
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EEAL F++ Q G+ D++ + S ASA + + + +H + + D+ I N+
Sbjct: 428 CEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNT 487
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V +YARCG E+A +F +E +D I+WN +++G+ Q+ +AL++F +M + K N
Sbjct: 488 LVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYN 547
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + +SA L + G++ HG + + + + NA++ +Y KCG ++ A+ +F+
Sbjct: 548 VFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFS 607
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ S RN SWN +I HG G +AL+ F QM +EG+KP+ +TF +L+ACSH GL+
Sbjct: 608 EM--SLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F M+ + + P HYAC+VD+LGRAG L A + +MP+ N +W LL
Sbjct: 666 EEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC++H GE+AA +L +LEP + +VL+SN YA + KW ++R+ MK++G++K
Sbjct: 726 ACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKE 785
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F DR++P ++YK + + + GY + H+ E E +
Sbjct: 786 PGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQK 845
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ HSEKLAVAFG+M L P ++V KNLRVC+DCHS + S + RR+I++RD R
Sbjct: 846 DPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYR 905
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G+CSC DYW
Sbjct: 906 FHHFNSGSCSCGDYW 920
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 242/486 (49%), Gaps = 9/486 (1%)
Query: 15 LLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L +C A R IH+ + ++ +G +I Y +G A +F +
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETF-VGNALIALYLGFGSFKLAERVFCDMLFC 208
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+F NT+I +A GH L+++ M+ SG+ + T +L ACAS + +GK
Sbjct: 209 DRVTF--NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +++ G D + +L+D+Y KCG + +F+ ++V W +M+ AY Q
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
++ +F + Q G+ + T + G + + +H +I N F D+ +
Sbjct: 327 LAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY++ G ++KAR + +M+EKRD++SW SM+ GY+Q+ EAL F EMQ+ P+
Sbjct: 387 LIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+ SAC + + + G + H + S D ++ N ++++YA+CG + A ++F
Sbjct: 447 NIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFR 506
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+I ++ +WN LI+G+G ++AL F +M + G K + TF S +SA ++ I
Sbjct: 507 EIE--HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADI 564
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G++ K E + ++ + G+ G + +A + +M L N+ W ++ +
Sbjct: 565 KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITS 623
Query: 492 CRIHGE 497
C HG
Sbjct: 624 CSQHGR 629
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 228/463 (49%), Gaps = 6/463 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+IH++ GL L +G +I Y G AR +F + + S W M+ YA
Sbjct: 64 EIHATSVVRGLGADRL-IGNLLIDLYAKNGLVWQARQVFKELSSRDHVS--WVAMLSGYA 120
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+G E LYS M + + Y VL AC L +G+++H + + F S+++
Sbjct: 121 QSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V AL+ +Y G +VF +M D V++ +I+ + Q E AL +F + Q G
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L D VT+ S+ +A +GD+ K + +H Y + D + S++ +Y +CG++E A
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
+F++ ++ +++ WN ML Y Q +++ +F +MQ + PN T ++ CT G
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTG 360
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+LG + H I + + D + ++DMY+K G LD A + + +R+V SW +
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE--KRDVVSWTSM 418
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
IAGY H +AL F +M + GV PD+I S SAC+ + +G + A +
Sbjct: 419 IAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++ + +V++ R G EAF + +++ ++ W L+
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIE-HKDEITWNGLI 520
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/675 (36%), Positives = 388/675 (57%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C + L +Q+HS L +G+ + G+ + + Y G+ TA +FN D
Sbjct: 251 LLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDL-YVKCGDIETAHDIFNL--GD 307
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
++ LWN M+ AY ++ E++ M+ +GI N +T+P +L+ C I G+
Sbjct: 308 RTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQ 367
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ GF SD YV L+DMY+K D K+ + + RD+VSWT MI Y Q +
Sbjct: 368 IHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDF 427
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EEAL F++ Q G+ D++ + S ASA + + + +H + + D+ I N+
Sbjct: 428 CEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNT 487
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V +YARCG E+A +F ++ +D I+WN +++G+ Q+ +AL++F +M + K N
Sbjct: 488 LVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYN 547
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + +SA L + G++ HG + + + + NA++ +Y KCG ++ A+ +F+
Sbjct: 548 VFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFS 607
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ S RN SWN +I HG G +AL+ F QM +EG+KP+ +TF +L+ACSH GL+
Sbjct: 608 EM--SLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F M+ + + P HYAC+VD+LGRAG L A + +MP+ N +W LL
Sbjct: 666 EEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLS 725
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC++H GE+AA +L +LEP + +VL+SN YA + KW ++R+ MK++G++K
Sbjct: 726 ACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKE 785
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F DR++P ++YK + + + GY + H+ E E +
Sbjct: 786 PGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQK 845
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ HSEKLAVAFG+M L P ++V KNLRVC+DCHS +F S + RR+I++RD R
Sbjct: 846 DPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYR 905
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G+CSC DYW
Sbjct: 906 FHHFNSGSCSCGDYW 920
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 240/486 (49%), Gaps = 9/486 (1%)
Query: 15 LLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L +C A R IH+ + ++ +G +I Y +G A +F +
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETF-VGNALIALYLGFGSFKLAERVFCDMLFC 208
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+F NT+I +A GH L+++ M+ SG+ + T +L ACAS + +GK
Sbjct: 209 DRVTF--NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +++ G D + +L+D+Y KCG + +F+ ++V W +M+ AY Q
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
++ +F + Q G+ + T + G + + +H +I N F D+ +
Sbjct: 327 LAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGV 386
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY++ ++KAR + +M+EKRD++SW SM+ GY+Q+ EAL F EMQ+ P+
Sbjct: 387 LIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+ SAC + + + G + H + S D ++ N ++++YA+CG + A ++F
Sbjct: 447 NIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFR 506
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+I ++ +WN LI+G+G +AL F +M + G K + TF S +SA ++ I
Sbjct: 507 EI--DHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADI 564
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G++ K E + ++ + G+ G + +A + +M L N+ W ++ +
Sbjct: 565 KQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITS 623
Query: 492 CRIHGE 497
C HG
Sbjct: 624 CSQHGR 629
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 226/463 (48%), Gaps = 6/463 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+IH++ GL L +G +I Y G AR +F + + S W M+ YA
Sbjct: 64 EIHATSVVRGLGADRL-IGNLLIDLYAKNGLVWQARQVFKELSSRDHVS--WVAMLSGYA 120
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
G E LYS M + + Y VL AC L +G+++H + + F S+++
Sbjct: 121 QRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V AL+ +Y G +VF +M D V++ +I+ + Q E AL +F + Q G
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L D VT+ S+ +A +GD+ K + +H Y + D + S++ +Y +CG++E A
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
+F++ ++ +++ WN ML Y Q +++ +F +MQ + PN T ++ CT G
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTG 360
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+LG + H I + + D + ++DMY+K LD A + + +R+V SW +
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEML--EKRDVVSWTSM 418
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
IAGY H +AL F +M + GV PD+I S SAC+ + +G + A +
Sbjct: 419 IAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++ + +V++ R G EAF + +++ ++ W L+
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREID-HKDEITWNGLI 520
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 249/704 (35%), Positives = 382/704 (54%), Gaps = 74/704 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
++ Y G+ +++ F+ + S S W TMI Y N G + + + M R GI
Sbjct: 86 VLSAYAKRGDMDSSCEFFDRLPQRDSVS--WTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG-------- 159
+ +T VL + A+ + GK VH I++ G + V +L++MYAKCG
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203
Query: 160 -----------------------QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
Q D F++M+ RD+V+W MI+ Y Q AL
Sbjct: 204 FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRAL 263
Query: 197 ILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+F K ++ +LS D T+ SV SA L + + +H + + F + N++++M
Sbjct: 264 DMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISM 323
Query: 256 YARCGNVEKARL---------------------------------VFDMMEKRDLISWNS 282
Y+RCG VE AR +FD ++ RD+++W +
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTA 383
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ GY Q+G EA+ LF M + +PN T ++S + L S G++ HG + S
Sbjct: 384 MIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSG 443
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
++ NA++ MYAK G + +A F D+ ER+ SW +I HGH +ALE
Sbjct: 444 EIYSVSVSNALITMYAKAGSITSASRAF-DLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLG 461
F ML EG++PDHIT+ + SAC+HAGL+++GR+ F M + + P + HYACMVD+ G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA + I++MP+ P+ WG+LL ACR++ G++AA L LEPE++G +
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
++N+Y+A KW E K+R+ MK+ +KK FS IE + F D ++P E+Y
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYIT 682
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
++ + EIK GY+PD + LHD+E+E +E +L +HSEKLA+AFG+++ + +++ KN
Sbjct: 683 MKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKN 742
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LRVCNDCH+A +FIS + R+IIVRD RFHHF+ G CSC DYW
Sbjct: 743 LRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 205/458 (44%), Gaps = 87/458 (18%)
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+RT F ++ + A YAK G D C+ FD + RD VSWT MI Y+ + +A+
Sbjct: 77 LRTAFSWNTVLSA-----YAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAI 131
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+ + +EG+ T+ +V ++V + + VH + + ++ + NS++ MY
Sbjct: 132 RIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 257 ARCGNVEKARLVFD-------------------------------MMEKRDLISWNSMLT 285
A+CG+ A++VFD M +RD+++WNSM++
Sbjct: 192 AKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 286 GYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
GY Q G AL +F +M ++S P+ T ++SAC L +G + H +I+ +
Sbjct: 252 GYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFD 311
Query: 345 IDATLRNAVMDMYAKC---------------------------------GDLDTAENMFN 371
I + NA++ MY++C GD++ A+N+F+
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFD 371
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +R+V +W +I GY HG +A+ F M+ E +P+ T ++LS S +
Sbjct: 372 SL--KDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASL 429
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY---EAFDMIKQMPLPPNDSV-WGA 487
G++ K V ++ M +AG + AFD+I+ D+V W +
Sbjct: 430 GHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIR----CERDTVSWTS 485
Query: 488 LLLACRIHG------EIAANYLFQ-LEPEHTGYFVLMS 518
+++A HG E+ L + L P+H Y + S
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 135/307 (43%), Gaps = 61/307 (19%)
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT---- 285
AQ VH I + + + + N+++ +Y++ G AR +FD M R SWN++L+
Sbjct: 33 AQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAK 92
Query: 286 ---------------------------GYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
GY GQ +A+ + EM +P+ T +
Sbjct: 93 RGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNV 152
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN-----DI 373
+++ + G+K H +I+ ++ + ++ N++++MYAKCGD A+ +F+ DI
Sbjct: 153 LASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDI 212
Query: 374 HP------------------------SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
+ER++ +WN +I+GY G+ +AL+ FS+ML +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRD 272
Query: 410 G-VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
+ PD T S+LSAC++ + G + + + ++ M R G +
Sbjct: 273 SMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 469 AFDMIKQ 475
A +I+Q
Sbjct: 333 ARRLIEQ 339
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/613 (39%), Positives = 372/613 (60%), Gaps = 12/613 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W MI G+ E ++L+ M SG + +T V+ ACA+ L+L G+ +H I
Sbjct: 239 WTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAI 298
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGC---KVFDEMSVRDLVSWTVMITAY-EQAEKPE 193
R G D V L++MYAKC C K+FD++ ++ SWT MIT Y ++ E
Sbjct: 299 RHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDE 358
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EAL LF+ ++ + T S A L + + V +A+ F C+ NS++
Sbjct: 359 EALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLI 418
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
+MYAR G ++ AR FD++ +++LIS+N+++ Y +N + EAL LF+E+++ +
Sbjct: 419 SMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAF 478
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T L+S +G+ G + H +I S +K++ ++ NA++ MY++CG++++A +F D+
Sbjct: 479 TFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
+RNV SW +I G+ HG +ALE F +MLEEGV+P+ +T+ ++LSACSH GL++E
Sbjct: 539 E--DRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNE 596
Query: 434 GRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
G K F M T+ V P ++HYACMVD+LGR+G L EA I MP + VW L AC
Sbjct: 597 GWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGAC 656
Query: 493 RIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+HG + AA + + EP ++L+SN+YA+++KW EV +R+ MK K L K A
Sbjct: 657 RVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAG 716
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S +E + F+ D +P E+Y ++++++V+IK GY+P+L LHDVE+E +E
Sbjct: 717 CSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEK 776
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
+L HSEK+AVAFG+++ + ++V KNLR+C DCHSA ++IS R+IIVRDANRFH
Sbjct: 777 LLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFH 836
Query: 668 HFEGGTCSCNDYW 680
H + G CSCN+YW
Sbjct: 837 HIKDGRCSCNEYW 849
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 239/495 (48%), Gaps = 16/495 (3%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LK C S +H LT S L ++ L + I + Y+ G+ A S+F +
Sbjct: 69 YSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISL-YSKCGQWEKATSIFQLM 127
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ + W+ M+ +ANN L + M +G N Y F +AC++ +
Sbjct: 128 GSSRDL-ISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSV 186
Query: 129 GKVVHGDIIRTGFL-SDSYVQAALVDMYAKCGQTD--DGCKVFDEMSVRDLVSWTVMITA 185
G + G +++TG+L SD V L+DM+ K G+ D KVF++M R+ V+WT+MIT
Sbjct: 187 GDSIFGFVVKTGYLQSDVCVGCGLIDMFVK-GRGDLVSAFKVFEKMPERNAVTWTLMITR 245
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Q EA+ LF + G D T+ V SA + +L Q +H AI + D
Sbjct: 246 LMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305
Query: 246 LCIQNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ-ASEALLLFD 301
C+ ++ MYA+C G++ AR +FD + ++ SW +M+TGY+Q G EAL LF
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
M + PN T + AC L + ++G + + + + N+++ MYA+ G
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+D A F+ + E+N+ S+N +I Y + + +ALE F+++ ++G+ TF S+
Sbjct: 426 RIDDARKAFDILF--EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASL 483
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
LS + G I +G + A + K +K ++ M R G + AF + + M N
Sbjct: 484 LSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRN 542
Query: 482 DSVWGALLLACRIHG 496
W +++ HG
Sbjct: 543 VISWTSIITGFAKHG 557
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 205/436 (47%), Gaps = 14/436 (3%)
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NNG + + M G + T+ LK C G +VH + ++ DS
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+L+ +Y+KCGQ + +F M S RDL+SW+ M++ + AL+ F +
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARC-GNVE 263
G + + A V ++ G+ + +L+ D+C+ ++ M+ + G++
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLV 222
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
A VF+ M +R+ ++W M+T +Q G A EA+ LF EM S +P+ T ++SAC
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA 282
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC---GDLDTAENMFNDIHPSERNV 380
+ LG++ H I + +D + +++MYAKC G + A +F+ I + NV
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI--LDHNV 340
Query: 381 SSWNVLIAGYGMH-GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
SW +I GY G+ +AL+ F M+ V P+H TF+S L AC++ + G + F
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCL---YEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
KL ++ M R+G + +AFD++ + L ++V A A ++
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA--YAKNLNS 458
Query: 497 EIAANYLFQLEPEHTG 512
E A ++E + G
Sbjct: 459 EEALELFNEIEDQGMG 474
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 8/244 (3%)
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
I NG+ +A+ + M + P+ T + + C S +G H + S++++D+
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
N+++ +Y+KCG + A ++F + S R++ SW+ +++ + + G +AL F M+
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQ-LMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMI 160
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRA-GC 465
E G P+ F + ACS A + G F + K ++ +V ++DM + G
Sbjct: 161 ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGD 220
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEHTGY----FVLMSNIY 521
L AF + ++MP N W ++ G LE +GY F L I
Sbjct: 221 LVSAFKVFEKMP-ERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVIS 279
Query: 522 AASN 525
A +N
Sbjct: 280 ACAN 283
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/709 (35%), Positives = 395/709 (55%), Gaps = 49/709 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
+L +C+ LA R+IH+ + SGL + L ++ Y +G A+ +F S+
Sbjct: 116 VLGACSSLAQGREIHNRVFYSGL-DSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET 174
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
S WN +I A++ +G L ++ M+ + NS T+ V+ ++ ++ EG+ +H
Sbjct: 175 S--WNAVILAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHA 231
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+I+ GF +D V AL++MY KCG + + +VFD+M RD+VSW VMI Y E
Sbjct: 232 EIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHE 291
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL L+QK EG T VS+ A + + + + VH + + ++ + ++V
Sbjct: 292 ALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVN 351
Query: 255 MYARCGNVE----------------------------------KARLVFDMMEKRDLISW 280
MYA+CG++E KAR VFD + RD ISW
Sbjct: 352 MYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISW 411
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNS-DCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
N+M+T Y+QNG A A+ +F EM + KP+ VT + ++ AC LG + H I
Sbjct: 412 NAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQIS 471
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
S ++ + + N +++MYA+CG L+ AE +F E+ V SW ++A + +G +A
Sbjct: 472 ESELESNVVVTNTLINMYARCGSLEEAERLF--AAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
L+ F +M EGVKPD +T+TSIL C+H G +++G + F DM +L ++ P H+A MVD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVD 589
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGY 513
+LGR+G L++A ++++ MP P+ W L ACRIHG E AA +++L+P T
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
++ MSNIYAA W +V +R+ M+ +GLKK S IE + F + + +P E+
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA-VVQ 632
+++ + ++ AGY+PD LHDV + ++E ML YHSEK+A+AFG+++ ++
Sbjct: 710 CEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIR 769
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG-GTCSCNDYW 680
V KNLRVC+DCH+A +FI+ I R IIVRD NRFH F G CSC DYW
Sbjct: 770 VVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 201/386 (52%), Gaps = 11/386 (2%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
++ TF VL +C+S ++EG+ +H I + F D+ V AL+ MY KC D VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 169 DEMS--VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+ M R++VSW MI AY Q EAL+L+ + +GL +D VT VSV A L
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ + +H + + N++V MYAR G+V A+ +F ++ RD SWN+++
Sbjct: 125 --QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
+ Q+G S AL +F EM+ D KPN T + ++S + GRK H I+ + D
Sbjct: 183 HSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTD 241
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ A+++MY KCG A +F+ + +R++ SWNV+I Y ++G +ALE + ++
Sbjct: 242 LVVATALINMYGKCGSSHEAREVFDKM--KKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
EG K TF SIL ACS + +GR + + + + EV +V+M + G L
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359
Query: 467 YEAFDMIKQMPLPPNDSV-WGALLLA 491
EA + M D+V W L+ A
Sbjct: 360 EEARKVFNAM--KNRDAVAWSTLIGA 383
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 10/220 (4%)
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
D +P+ VT L ++ +C+ G GR H I S + D + NA++ MY KC L A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
++F + +RNV SWN +IA Y +GH +AL + +M +G+ DH+TF S+L ACS
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+ +GR+ + + +V M R G + +A M + + +++ W
Sbjct: 122 S---LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ-TRDETSWN 177
Query: 487 ALLLACRIHGEIA-ANYLFQ-----LEPEHTGYFVLMSNI 520
A++LA G+ + A +F+ ++P T Y ++S
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGF 217
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 246/676 (36%), Positives = 387/676 (57%), Gaps = 21/676 (3%)
Query: 19 CNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
C+ L+Q +H+ + + L+ + LG +I Y + AR F+ + K
Sbjct: 68 CSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM--GKKTL 125
Query: 76 FLWNTMIRAYANNGHCVETLELYSTM---RRSGISSNSYTFPFVLKACASNSLILEGKVV 132
WN +I Y+ NG L++Y M G+ ++ TF L AC I +G+ +
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREI 185
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
+ +G+ SDS VQ AL++MY+KCG + KVFD + RD+++W MI+ Y +
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAA 245
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+AL LFQ+ + VT + + +A L D+ + +A+H + + DL I N +
Sbjct: 246 TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVL 305
Query: 253 VAMYARCGN-VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ MY +C + +E+AR VF+ M RD+I+WN ++ Y+Q GQA +AL +F +MQ + PN
Sbjct: 306 LNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPN 365
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T ++SAC LG+++ G+ H I + K D L N++M+MY +CG LD +F
Sbjct: 366 EITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFA 425
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
I ++++ SW+ LIA Y HGH R LE F ++L+EG+ D +T S LSACSH G++
Sbjct: 426 AIR--DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGML 483
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
EG + F M + P+ +H+ CMVD+L RAG L A ++I MP P+ W +LL
Sbjct: 484 KEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLS 543
Query: 491 ACRIHGEI-----AANYLFQLEPEHTGYFV-LMSNIYAASNKWREVGKLREDMKNKGLKK 544
C++H + A+ LF+LE E V L+SN+YA + +W +V K R + +K
Sbjct: 544 GCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAARK 600
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE + F D+ +P + + +++ ++ ++K AGY+PD+ LH+V++E+
Sbjct: 601 NPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEE 660
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E ML YHSEKLA+A+G+++ P + + KNLR C DCH+A +FIS I RKI+VRD+
Sbjct: 661 KEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDST 720
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHFE G+CSC DYW
Sbjct: 721 RFHHFENGSCSCKDYW 736
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 237/453 (52%), Gaps = 16/453 (3%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G A ++F++I + S S W ++ A+A NGH E L Y M G+ +
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVS--WTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFDE 170
F + C+S+ + +G+++H I+ T L D + AL+ MYA+C + K FDE
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQ---KTQQEGLLSDSVTIVSVASAVGQLGDV 227
M + LV+W +I Y + AL ++Q EG+ D++T S A +GD+
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ + + + + + D +QN+++ MY++CG++E AR VFD ++ RD+I+WN+M++GY
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
+ G A++AL LF M +D KPN VT + L++ACT L + GR H + + D
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299
Query: 348 TLRNAVMDMYAKC-GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ N +++MY KC L+ A +F + R+V +WN+LI Y +G + AL+ F QM
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRT--RDVITWNILIVAYVQYGQAKDALDIFKQM 357
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
E V P+ IT +++LSAC+ G +G+ A + K +V +++M R G L
Sbjct: 358 QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSL 417
Query: 467 YEA---FDMIKQMPLPPNDSVWGALLLACRIHG 496
+ F I+ L W L+ A HG
Sbjct: 418 DDTVGVFAAIRDKSLVS----WSTLIAAYAQHG 446
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 157/286 (54%), Gaps = 6/286 (2%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY KCG D VF + + VSWT+++ A+ + EAL +++ EGL D
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMM 272
V D+ + Q +H + LE D+ + +++ MYARC ++E AR FD M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD---CKPNPVTALILVSACTYLGSRQ 329
K+ L++WN+++ GY +NG AL ++ +M + KP+ +T + ACT +G
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
GR+ + S D+ ++NA+++MY+KCG L++A +F+ + R+V +WN +I+G
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL--KNRDVIAWNTMISG 238
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
Y G +ALE F +M KP+ +TF +L+AC++ +++GR
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 9/227 (3%)
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY +CG+V A VF +E + +SW ++ + +NG EAL + M +P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
++ + C+ + G+ H I+ + ++ D L A++ MYA+C DL+ A F+++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE---EGVKPDHITFTSILSACSHAGL 430
++ + +WN LIAGY +G R AL+ + M+ EG+KPD ITF+S L AC+ G
Sbjct: 121 --GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGD 178
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIK 474
I +GR+ A + +++M + G L A FD +K
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 267/680 (39%), Positives = 379/680 (55%), Gaps = 56/680 (8%)
Query: 12 YDQLLKSC---NFLASLRQIHSSL--TTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
Y LL++C L ++IH TS + LH K+ Y + + AR LF+
Sbjct: 11 YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLH---KLTRLYLSCNQVVLARRLFD 67
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
I N LWN +IRAYA NG ++LY +M G+ N YT+PFVLKAC+ I
Sbjct: 68 EIPNPSV--ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+G +H G SD +V ALVD YAKCG + ++F MS RD+V+W MI
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
++A+ L + Q+EG+ +S TIV V
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT-------------------------- 219
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
C + AR +FD+M R+ +SW++M+ GY+ + EAL +F MQ S
Sbjct: 220 ------------CQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLS 267
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
P+ T L ++ AC++L + Q G HGY+I D + NA++DMY+KCG + A
Sbjct: 268 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 327
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+FN + ++ SWN +I GYG+HG G +AL F +L G+KPD ITF +LS+CS
Sbjct: 328 REVFNRM--DRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 385
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL+ EGR F M++ S+ P ++H CMVD+LGRAG + EA I+ MP P+ +W
Sbjct: 386 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 445
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
ALL ACRIH GE + + L PE TG FVL+SNIY+A+ +W + +R K+
Sbjct: 446 SALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDW 505
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
GLKK S IE + F D+ + ++ +K+E + VE+K GY + S DV
Sbjct: 506 GLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDV 565
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E+E++E +L YHSEKLA+AFGI+NL + VTKNLRVC DCH+A +F++ I +R+I V
Sbjct: 566 EEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITV 625
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RDANRFHHF+ GTC+C D+W
Sbjct: 626 RDANRFHHFKNGTCNCGDFW 645
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/708 (35%), Positives = 409/708 (57%), Gaps = 47/708 (6%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L C L ++Q+H+ + + +IN L+ + ++ + A +LF+SI + S
Sbjct: 22 LSFCKSLNHIKQLHAHILRT-VINHKLNSFLFNLSFSSSSINLSYALNLFSSI-SPLPES 79
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
++N+++R + +G T+ Y +R G + +FP +LKA + S + EG +HG
Sbjct: 80 IVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGF 139
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+ LSD +V+ L+DMYA CG+ + VFDEMS RD+V+W MI Y + +EA
Sbjct: 140 AFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEA 199
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN--------------- 240
LF++ + ++ D + + ++ SA G+ G++ +A++ + I N
Sbjct: 200 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTM 259
Query: 241 -----------AFLEDLCIQN-----SIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
F + ++N ++V+ Y++ G ++ AR++FD E +DL+ W +M+
Sbjct: 260 YAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMI 319
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
+ Y ++ EAL +F+EM S KP+ VT L ++SAC LG+ + H Y + ++
Sbjct: 320 SAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLE 379
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ NA+++MYAKCG LD A ++F + P+ RNV SW+ +I + MHG +L F+
Sbjct: 380 SVLPIDNALINMYAKCGGLDAARDVFEKM-PT-RNVVSWSSMINAFAMHGEASDSLSLFA 437
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRA 463
QM +E V+P+ +TF +L CSH+GL++EG+K FA MT + ++ P+++HY CMVD+ GRA
Sbjct: 438 QMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRA 497
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
L EA ++I+ MP+ PN +WG+L+ ACR+H GE+AA + +LEP+H G VLMS
Sbjct: 498 NLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMS 557
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA +W V +R M+ K + K S I+ F D+ + E+Y K+
Sbjct: 558 NIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLY 617
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE------AVVQ 632
+ ++K+AGY+PD L DVE+E+++ ++ +HSEKLA+ FG+MN E V++
Sbjct: 618 EVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIR 677
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ KNLRVC DCH+ F+ +S +Y +IIVRD RFH ++ G CSC DYW
Sbjct: 678 IVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/709 (35%), Positives = 394/709 (55%), Gaps = 49/709 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
+L +C+ LA R+IH+ + SGL + L ++ Y +G A+ +F S+
Sbjct: 116 VLGACSSLAQGREIHNRVFYSGL-DSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET 174
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
S WN +I A++ +G L ++ M+ + NS T+ V+ ++ ++ EG+ +H
Sbjct: 175 S--WNAVILAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHA 231
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+I+ GF SD V AL++MY KCG + + +VFD+M RD+VSW VMI Y Q E
Sbjct: 232 EIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHE 291
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL L+QK EG T VS+ A + + + + VH + + ++ + ++V
Sbjct: 292 ALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVN 351
Query: 255 MYARCGNVE----------------------------------KARLVFDMMEKRDLISW 280
MYA+CG++E KAR VFD + RD I W
Sbjct: 352 MYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICW 411
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNS-DCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
N+M+T Y+QNG A A+ +F EM + KP+ VT + ++ AC LG + H I
Sbjct: 412 NAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQIS 471
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
S ++ + + N +++MYA+CG L+ AE +F E+ V SW ++A + +G +A
Sbjct: 472 ESELESNVVVTNTLINMYARCGSLEEAERLF--AAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
L+ F +M EGVKPD +T+TSIL C+H G +++G + F DM +L + P H+A MVD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVD 589
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGY 513
+LGR+G L++A ++++ MP P+ W L ACRIHG E AA +++L+P T
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
++ MSNIYAA W +V +R+ M+ +GLKK S IE + F + + +P E+
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA-VVQ 632
+++ + ++ AGY+PD LHDV + ++E ML YHSEK+A+AFG+++ ++
Sbjct: 710 CEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIR 769
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG-GTCSCNDYW 680
V KNLRVC+DCH+A +FI+ I R II+RD NRFH F G CSC DYW
Sbjct: 770 VVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 199/386 (51%), Gaps = 11/386 (2%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
++ TF VL +C+S + EG+ +H I + F D+ V AL+ MY KC D VF
Sbjct: 6 DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 169 DEMS--VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+ M R++VSW MI AY Q EAL+L+ + +GL +D VT VSV A L
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ + +H + + N++V MYAR G+V A+ +F ++ RD SWN+++
Sbjct: 125 --QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
+ Q+G S AL +F EM+ D KPN T + ++S + GRK H I+ + D
Sbjct: 183 HSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSD 241
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ A+++MY KCG A +F+ + +R++ SWNV+I Y +G +ALE + ++
Sbjct: 242 LVVATALINMYGKCGSSHEAREVFDKM--KKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
EG K TF SIL ACS + +GR + + + + EV +V+M + G L
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359
Query: 467 YEAFDMIKQMPLPPNDSV-WGALLLA 491
EA + M D+V W L+ A
Sbjct: 360 EEARKVFNAM--KNRDAVAWSTLIGA 383
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 10/220 (4%)
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
D +P+ VT L ++ +C+ G GR H I S + D + NA++ MY KC L A
Sbjct: 2 DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
++F + +RNV SWN +IA Y +GH +AL + +M +G+ DH+TF S+L ACS
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+ +GR+ + + +V M R G + +A M + + +++ W
Sbjct: 122 S---LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQ-TRDETSWN 177
Query: 487 ALLLACRIHGEIA-ANYLFQ-----LEPEHTGYFVLMSNI 520
A++LA G+ + A +F+ ++P T Y ++S
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGF 217
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/673 (38%), Positives = 394/673 (58%), Gaps = 15/673 (2%)
Query: 17 KSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
++C+ L SLR +H + + + A L +I+ Y G+ +A LF ++ +
Sbjct: 209 EACSELGSLRLGRSVHGYVVRREIESNA-SLNNSLIVMYGKLGDLYSAERLFENVPCRMT 267
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
W MI Y +G E L +++ M+ + N T VL ACA + EG+ VH
Sbjct: 268 AP--WTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVH 325
Query: 134 GDIIRTGFLSD-SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
G +IR + ++ AL+++YA G D KVF+ + + ++SW +I+ + + +P
Sbjct: 326 GFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQP 385
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EEAL+LF + Q +GL+ DS ++ S SA G + +HGY I D +QN++
Sbjct: 386 EEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNAL 444
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ MYA+CG V A +F+ ++++ L++WNSM+ G+ QNG + EA+ LFD+M + K +
Sbjct: 445 IDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDK 504
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+T L ++ AC++LG + G+ H +I ++ D+ L A+ DMY+KCG+L A +F+
Sbjct: 505 LTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDR 564
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ SER++ SW+V+IAGYGMHG + F+QML G+KP+ ITF ILSACSHAG ++
Sbjct: 565 M--SERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVE 622
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
EG+ F M++ V+P+ H+ACMVD+L RAG L A+ +I +P P N S+WGALL C
Sbjct: 623 EGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGC 682
Query: 493 RIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
RIH I L ++ TGY+ L+SNIYA W + GK+R MK+KGL+K
Sbjct: 683 RIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPG 742
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
+S IE K I F D + K++Y+ +E+ + Y + ++ ++E+
Sbjct: 743 YSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKEN 802
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
+ HSEKLA+AFGI+N P ++++KNLRVC DCHS + S I R+II+RD NRFH
Sbjct: 803 NVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFH 862
Query: 668 HFEGGTCSCNDYW 680
F G+CSCNDYW
Sbjct: 863 CFRNGSCSCNDYW 875
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/473 (31%), Positives = 243/473 (51%), Gaps = 11/473 (2%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
Y L + C +L Q+H+ L +GL ++ K+I Y G +++ +F++
Sbjct: 3 LYMPLFRRCATSTTLTQLHAHLFITGL-HRHPPASTKLIESYAQIGIFESSKRVFDTF-- 59
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEG 129
K SF+W +I+ Y G E + LY M + +++ FP VLKAC+ + G
Sbjct: 60 PKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVG 119
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
VHG +I+ GF SD+ V+ +L+ MY + DD CK FD M +RD+V+W+ ++ + Q
Sbjct: 120 GKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQN 179
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+ E L +F + E + DSVT++SV A +LG + ++VHGY + + +
Sbjct: 180 GQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLN 239
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
NS++ MY + G++ A +F+ + R W M++ Y Q+G EAL +F +MQ +
Sbjct: 240 NSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKME 299
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT-LRNAVMDMYAKCGDLDTAEN 368
PN VT + ++ AC LG + GR HG++I M + L A+M++YA G+L
Sbjct: 300 PNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHK 359
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F I E+ + SWN LI+ + +G +AL F QM +G+ PD + S LSAC
Sbjct: 360 VFETI--KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTI 417
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPL 478
G + + K + A ++DM + G ++ A F+ IK+ L
Sbjct: 418 SFSQLGAQIHGYIIKTGNFNDFVQNA-LIDMYAKCGFVHSANKMFEKIKEKSL 469
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/689 (37%), Positives = 410/689 (59%), Gaps = 21/689 (3%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLRQ---IHSS-LTTSGLINQALHLGAKIIIKYTTYGEPN 59
L P+T F L++C + ++Q IH++ L +S IN + + +I Y +G+
Sbjct: 314 LAPNTYTFV-AALQACEDSSFIKQGMFIHATVLKSSYYIN--VFVANALIAMYARFGKMG 370
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
A ++F ++ + + S WN+M+ + NG E L+ Y MR +G + ++ A
Sbjct: 371 EAANIFYNMDDWDTIS--WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAA 428
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK-CGQTDDGCKVFDEMSVRDLVS 178
A + L G +H ++ G SD V +LVDMYAK C C +FD+M +D+VS
Sbjct: 429 SARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC-IFDKMPDKDVVS 487
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
WT +I + Q AL LF++ Q EG+ D + I S+ A L + + +H Y I
Sbjct: 488 WTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYII 547
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
L DL +QN IV +Y CGNV+ A +F+++E +D++SW SM++ Y+ NG A+EAL
Sbjct: 548 RKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALE 606
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
LF M+ + +P+ ++ + ++SA L + + G++ HG++I ++ +L + ++DMYA
Sbjct: 607 LFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYA 666
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+CG L+ + N+FN I +++ W +I YGMHG GR A++ F +M +E + PDHI F
Sbjct: 667 RCGTLEKSRNVFNFIR--NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAF 724
Query: 419 TSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
++L ACSH+GL++EGR+ M + ++P +HY C+VD+LGRA L EA+ +K M
Sbjct: 725 VAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGME 784
Query: 478 LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ P VW ALL AC+IH GEIAA L +++PE+ G +VL+SN+YAA +W++V +
Sbjct: 785 VEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEE 844
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI-KMAGYMP 591
+R MK GLKK S IE G + F D+ +P E+Y K+ + ++ K GY+
Sbjct: 845 VRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVA 904
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
LH+ ++E++ ML HSE+LA+A+G++ A +++TKNLRVC DCH+ + IS
Sbjct: 905 QTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLIS 964
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ R++++RDANRFHHF+GG CSC D W
Sbjct: 965 KFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 156/504 (30%), Positives = 266/504 (52%), Gaps = 13/504 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+ C +L +Q+H+ + TS + ++ L +++ Y G A LF+ +
Sbjct: 117 YSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM 176
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ F WN MI AY NG + +LELY MR SGI ++ TFP +LKAC
Sbjct: 177 PHKTI--FTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRC 234
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYE 187
G VHG I+ G++S +V ++V MY KC + ++FD M + D+VSW MI+AY
Sbjct: 235 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 294
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ EAL LF + Q+ L ++ T V+ A + + +H + +++ ++
Sbjct: 295 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 354
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N+++AMYAR G + +A +F M+ D ISWNSML+G++QNG EAL + EM+++
Sbjct: 355 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 414
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
KP+ V + +++A G+ G + H Y + + + D + N+++DMYAK + +
Sbjct: 415 QKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 474
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + +++V SW +IAG+ +G +ALE F ++ EG+ D + +SIL ACS
Sbjct: 475 CIFDKM--PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSG 532
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
LI ++ + + + + V +VD+ G G + A M + + D V
Sbjct: 533 LKLISSVKEIHSYIIRKGLSDLVLQNG-IVDVYGECGNVDYAARMFELIEF--KDVVSWT 589
Query: 488 LLLACRIHGEIA--ANYLFQLEPE 509
+++C +H +A A LF L E
Sbjct: 590 SMISCYVHNGLANEALELFHLMKE 613
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/676 (36%), Positives = 388/676 (57%), Gaps = 21/676 (3%)
Query: 19 CNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
C+ L+Q +H+ + + L+ + LG +I Y + AR F+ + K
Sbjct: 68 CSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM--GKKTL 125
Query: 76 FLWNTMIRAYANNGHCVETLELYSTM---RRSGISSNSYTFPFVLKACASNSLILEGKVV 132
WN +I Y+ NG L++Y M G+ ++ TF L AC+ I +G+ +
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREI 185
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
+ +G+ SDS VQ AL++MY+KCG + KVFD + RD+++W MI+ Y +
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAA 245
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+AL LFQ+ + VT + + +A L D+ + +A+H + + DL I N +
Sbjct: 246 TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVL 305
Query: 253 VAMYARCGN-VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ MY +C + +E+AR VF+ + RD+I+WN ++ Y+Q GQA +AL +F +MQ + PN
Sbjct: 306 LNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPN 365
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T ++SAC LG+++ G+ H I + K D L N++M+MY +CG LD +F
Sbjct: 366 EITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFA 425
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
I ++++ SW+ LIA Y HGH R LE F ++L+EG+ D +T S LSACSH G++
Sbjct: 426 AIR--DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGML 483
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
EG + F M + P+ +H+ CMVD+L RAG L A ++I MP P+ W +LL
Sbjct: 484 KEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLS 543
Query: 491 ACRIHGEI-----AANYLFQLEPEHTGYFV-LMSNIYAASNKWREVGKLREDMKNKGLKK 544
C++H + A+ LF+LE E V L+SN+YA + +W +V K R + +K
Sbjct: 544 GCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTR---NRRAARK 600
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE + F D+ +P + + +++ ++ ++K AGY+PD+ LH+V++E+
Sbjct: 601 NPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEE 660
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E ML YHSEKLA+A+G+++ P + + KNLR C DCH+A +FIS I RKI+VRD+
Sbjct: 661 KEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDST 720
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHFE G+CSC DYW
Sbjct: 721 RFHHFENGSCSCKDYW 736
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 237/453 (52%), Gaps = 16/453 (3%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G A ++F++I + S S W ++ A+A NGH E L Y M G+ +
Sbjct: 2 YGKCGSVADALAVFHAIEHPNSVS--WTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFDE 170
F + C+S+ + +G+++H I+ T L D + AL+ MYA+C + K FDE
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQ---KTQQEGLLSDSVTIVSVASAVGQLGDV 227
M + LV+W +I Y + AL ++Q EG+ D++T S A +GD+
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ + + + + + D +QN+++ MY++CG++E AR VFD ++ RD+I+WN+M++GY
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
+ G A++AL LF M +D KPN VT + L++ACT L + GR H + + D
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299
Query: 348 TLRNAVMDMYAKC-GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ N +++MY KC L+ A +F + R+V +WN+LI Y +G + AL+ F QM
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRT--RDVITWNILIVAYVQYGQAKDALDIFKQM 357
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
E V P+ IT +++LSAC+ G +G+ A + K +V +++M R G L
Sbjct: 358 QLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSL 417
Query: 467 YEA---FDMIKQMPLPPNDSVWGALLLACRIHG 496
+ F I+ L W L+ A HG
Sbjct: 418 DDTVGVFAAIRDKSLVS----WSTLIAAYAQHG 446
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 157/286 (54%), Gaps = 6/286 (2%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY KCG D VF + + VSWT+++ A+ + EAL +++ EGL D
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMM 272
V D+ + Q +H + LE D+ + +++ MYARC ++E AR FD M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD---CKPNPVTALILVSACTYLGSRQ 329
K+ L++WN+++ GY +NG AL ++ +M + KP+ +T + AC+ +G
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
GR+ + S D+ ++NA+++MY+KCG L++A +F+ + R+V +WN +I+G
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL--KNRDVIAWNTMISG 238
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
Y G +ALE F +M KP+ +TF +L+AC++ +++GR
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 9/227 (3%)
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY +CG+V A VF +E + +SW ++ + +NG EAL + M +P+
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
++ + C+ + G+ H I+ + ++ D L A++ MYA+C DL+ A F+++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE---EGVKPDHITFTSILSACSHAGL 430
++ + +WN LIAGY +G R AL+ + M+ EG+KPD ITF+S L ACS G
Sbjct: 121 --GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD 178
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIK 474
I +GR+ A + +++M + G L A FD +K
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK 225
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 257/689 (37%), Positives = 410/689 (59%), Gaps = 21/689 (3%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLRQ---IHSS-LTTSGLINQALHLGAKIIIKYTTYGEPN 59
L P+T F L++C + ++Q IH++ L +S IN + + +I Y +G+
Sbjct: 278 LAPNTYTFV-AALQACEDSSFIKQGMFIHATVLKSSYYIN--VFVANALIAMYARFGKMG 334
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
A ++F ++ + + S WN+M+ + NG E L+ Y MR +G + ++ A
Sbjct: 335 EAANIFYNMDDWDTIS--WNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAA 392
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK-CGQTDDGCKVFDEMSVRDLVS 178
A + L G +H ++ G SD V +LVDMYAK C C +FD+M +D+VS
Sbjct: 393 SARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC-IFDKMPDKDVVS 451
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
WT +I + Q AL LF++ Q EG+ D + I S+ A L + + +H Y I
Sbjct: 452 WTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYII 511
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
L DL +QN IV +Y CGNV+ A +F+++E +D++SW SM++ Y+ NG A+EAL
Sbjct: 512 RKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALE 570
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
LF M+ + +P+ ++ + ++SA L + + G++ HG++I ++ +L + ++DMYA
Sbjct: 571 LFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYA 630
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+CG L+ + N+FN I +++ W +I YGMHG GR A++ F +M +E + PDHI F
Sbjct: 631 RCGTLEKSRNVFNFIR--NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAF 688
Query: 419 TSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
++L ACSH+GL++EGR+ M + ++P +HYAC+VD+LGRA L EA+ +K M
Sbjct: 689 VAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGME 748
Query: 478 LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ P VW ALL AC+IH GEIAA L +++PE+ G +VL+SN+Y+A +W++V
Sbjct: 749 VEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEX 808
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI-KMAGYMP 591
+R MK GLKK S IE G + F D+ +P E+Y K+ + ++ K GY+
Sbjct: 809 VRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVA 868
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
LH+ ++E++ ML HSE+LA+A+G++ A +++TKNLRVC DCH+ + IS
Sbjct: 869 QTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLIS 928
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ R++++RDANRFHHF+GG CSC D W
Sbjct: 929 KFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/504 (30%), Positives = 266/504 (52%), Gaps = 13/504 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+ C +L +Q+H+ + TS + ++ L +++ Y G A LF+ +
Sbjct: 81 YSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM 140
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ F WN MI AY NG + +LELY MR SGI ++ TFP +LKAC
Sbjct: 141 PHKTI--FTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRY 198
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYE 187
G VHG I+ G++S +V ++V MY KC + ++FD M + D+VSW MI+AY
Sbjct: 199 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 258
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ EAL LF + Q+ L ++ T V+ A + + +H + +++ ++
Sbjct: 259 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 318
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N+++AMYAR G + +A +F M+ D ISWNSML+G++QNG EAL + EM+++
Sbjct: 319 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 378
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
KP+ V + +++A G+ G + H Y + + + D + N+++DMYAK + +
Sbjct: 379 QKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 438
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + +++V SW +IAG+ +G +ALE F ++ EG+ D + +SIL ACS
Sbjct: 439 CIFDKM--PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSG 496
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
LI ++ + + + + V +VD+ G G + A M + + D V
Sbjct: 497 LKLISSVKEIHSYIIRKGLSDLVLQNG-IVDVYGECGNVDYAARMFELIEF--KDVVSWT 553
Query: 488 LLLACRIHGEIA--ANYLFQLEPE 509
+++C +H +A A LF L E
Sbjct: 554 SMISCYVHNGLANEALELFHLMKE 577
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/613 (38%), Positives = 371/613 (60%), Gaps = 12/613 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W MI G+ E ++L+ M SG + +T V+ ACA+ L+L G+ +H I
Sbjct: 239 WTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAI 298
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGC---KVFDEMSVRDLVSWTVMITAY-EQAEKPE 193
R G D V L++MYAKC C K+FD++ ++ SWT MIT Y ++ E
Sbjct: 299 RHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDE 358
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EAL LF+ ++ + T S A L + + V +A+ F C+ NS++
Sbjct: 359 EALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLI 418
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
+MYAR G ++ AR FD++ +++LIS+N+++ Y +N + EAL LF+E+++ +
Sbjct: 419 SMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAF 478
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T L+S +G+ G + H +I S +K++ ++ NA++ MY++CG++++A +F D+
Sbjct: 479 TFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDM 538
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
+RNV SW +I G+ HG +ALE F +MLEEGV+P+ +T+ ++LSACSH GL++E
Sbjct: 539 E--DRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNE 596
Query: 434 GRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
G K F M T+ V P ++HYAC+VD+LGR+G L EA I MP + VW L AC
Sbjct: 597 GWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGAC 656
Query: 493 RIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+HG + AA + + EP ++L+SN+YA+ +KW EV +R+ MK K L K A
Sbjct: 657 RVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAG 716
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S +E + F+ D +P E+Y ++++++V+IK GY+P+L LHDVE+E +E
Sbjct: 717 CSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEK 776
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
+L HSEK+AVAFG+++ + ++V KNLR+C DCHSA ++IS R+IIVRDANRFH
Sbjct: 777 LLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFH 836
Query: 668 HFEGGTCSCNDYW 680
H + G CSCN+YW
Sbjct: 837 HIKDGRCSCNEYW 849
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 238/495 (48%), Gaps = 16/495 (3%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LK C S +H LT S L ++ L + I + Y+ G+ A S+F +
Sbjct: 69 YSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISL-YSKCGQWEKATSIFRLM 127
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ + W+ M+ +ANN L + M +G N Y F +AC++ +
Sbjct: 128 GSSRDL-ISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSV 186
Query: 129 GKVVHGDIIRTGFL-SDSYVQAALVDMYAKCGQTD--DGCKVFDEMSVRDLVSWTVMITA 185
G + G +I+TG+L SD V L+DM+ K G+ D KVF++M R+ V+WT+MIT
Sbjct: 187 GDSIFGFVIKTGYLQSDVCVGCGLIDMFVK-GRGDLVSAFKVFEKMPERNAVTWTLMITR 245
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Q EA+ LF G D T+ V SA + +L Q +H AI + D
Sbjct: 246 LMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305
Query: 246 LCIQNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ-ASEALLLFD 301
C+ ++ MYA+C G++ AR +FD + ++ SW +M+TGY+Q G EAL LF
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
M + PN T + AC L + ++G + + + + N+++ MYA+ G
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+D A F+ + E+N+ S+N +I Y + + +ALE F+++ ++G+ TF S+
Sbjct: 426 RIDDARKAFDILF--EKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASL 483
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
LS + G I +G + A + K +K ++ M R G + AF + + M N
Sbjct: 484 LSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRN 542
Query: 482 DSVWGALLLACRIHG 496
W +++ HG
Sbjct: 543 VISWTSIITGFAKHG 557
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 205/436 (47%), Gaps = 14/436 (3%)
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NNG + + M G + T+ LK C G +VH + ++ DS
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+L+ +Y+KCGQ + +F M S RDL+SW+ M++ + AL+ F +
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARC-GNVE 263
G + + A V ++ G+ I +L+ D+C+ ++ M+ + G++
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLV 222
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
A VF+ M +R+ ++W M+T +Q G A EA+ LF +M S +P+ T ++SAC
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA 282
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC---GDLDTAENMFNDIHPSERNV 380
+ LG++ H I + +D + +++MYAKC G + A +F+ I + NV
Sbjct: 283 NMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQI--LDHNV 340
Query: 381 SSWNVLIAGYGMH-GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
SW +I GY G+ +AL+ F M+ V P+H TF+S L AC++ + G + F
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCL---YEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
KL ++ M R+G + +AFD++ + L ++V A A ++
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDA--YAKNLNS 458
Query: 497 EIAANYLFQLEPEHTG 512
E A ++E + G
Sbjct: 459 EEALELFNEIEDQGMG 474
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 100/204 (49%), Gaps = 4/204 (1%)
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
I NG+ +A+ + M + P+ T + + C S +G H + S++++D+
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
N+++ +Y+KCG + A ++F + S R++ SW+ +++ + + G +AL F M+
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFR-LMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMI 160
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRA-GC 465
E G P+ F + ACS A + G F + K ++ +V ++DM + G
Sbjct: 161 ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGD 220
Query: 466 LYEAFDMIKQMPLPPNDSVWGALL 489
L AF + ++MP N W ++
Sbjct: 221 LVSAFKVFEKMP-ERNAVTWTLMI 243
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/666 (37%), Positives = 383/666 (57%), Gaps = 20/666 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+QIH + SGL +Q + +G +I Y G + ARS+F ++ S WNTMI
Sbjct: 955 KQIHGIVMRSGL-DQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLIS--WNTMISGC 1011
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG-----KVVHGDIIRTG 140
+G ++ ++ + R + + +T VL+AC+S LEG +H ++ G
Sbjct: 1012 TLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSS----LEGGYYLATQIHACAMKAG 1067
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
+ DS+V AL+D+Y+K G+ ++ +F DL SW ++ Y + +AL L+
Sbjct: 1068 VVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYI 1127
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
Q+ G SD +T+V+ A A G L + + + +H + F DL + + ++ MY +CG
Sbjct: 1128 LMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCG 1187
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
+E AR VF + D ++W +M++G ++NGQ AL + +M+ S +P+ T LV
Sbjct: 1188 EMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVK 1247
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
AC+ L + + GR+ H I+ N D + +++DMYAKCG+++ A +F + R +
Sbjct: 1248 ACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFK--RTNTRRI 1305
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
+SWN +I G HG+ ++AL+FF M GV PD +TF +LSACSH+GL+ E + F
Sbjct: 1306 ASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYS 1365
Query: 441 MTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH---- 495
M K ++PE++HY+C+VD L RAG + EA +I MP + S++ LL ACR+
Sbjct: 1366 MQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRE 1425
Query: 496 -GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
G+ A L LEP + +VL+SN+YAA+N+W V R M+ +KK FS ++
Sbjct: 1426 TGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLK 1485
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+ F DR + +Y KVE + I+ GY+PD AL DVE+ED+E L YHSE
Sbjct: 1486 NKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSE 1545
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+A+G+M P ++V KNLRVC DCHSA ++IS +++R+I++RDANRFHHF G C
Sbjct: 1546 KLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGIC 1605
Query: 675 SCNDYW 680
SC DYW
Sbjct: 1606 SCGDYW 1611
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 201/404 (49%), Gaps = 35/404 (8%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA- 84
++ H+ + TSG + + +I Y G ++AR LF++ + WN ++ A
Sbjct: 676 KRAHARILTSGH-HPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL 734
Query: 85 --YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL 142
+A+ H + L+ +RRS +S+ +T V K C ++ + +HG ++ G
Sbjct: 735 AAHADKSH--DGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQ 792
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
D +V ALV++YAK G + +FD M+VRD+V W VM+ AY EA++LF +
Sbjct: 793 WDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEF 852
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+ G D VT+ +++ V ++L+ + YA + + MY G+
Sbjct: 853 HRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYA-------------TKLFMYDDDGS- 898
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
D+I WN L+ ++Q G+A EA+ F +M NS + +T +++++
Sbjct: 899 -------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVV 945
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
L +LG++ HG ++ S + ++ N +++MY K G + A ++F ++ E ++ S
Sbjct: 946 AGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMN--EVDLIS 1003
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
WN +I+G + G ++ F +L + + PD T S+L ACS
Sbjct: 1004 WNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACS 1047
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 179/400 (44%), Gaps = 34/400 (8%)
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
T R I S F + +A A++ L L GK H I+ +G D +V L+ MYAKCG
Sbjct: 647 TPRAHLIHSLPQCFSILRQAIAASDLSL-GKRAHARILTSGHHPDRFVTNNLITMYAKCG 705
Query: 160 QTDDGCKVFDEM--SVRDLVSWTVMITAY-EQAEKPEEALILFQKTQQEGLLSDSVTIVS 216
K+FD + RDLV+W +++A A+K + LF+ ++ + + T+
Sbjct: 706 SLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAP 765
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRD 276
V ++++HGYA+ D+ + ++V +YA+ G + +AR++FD M RD
Sbjct: 766 VFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRD 825
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
++ WN M+ Y+ EA+LLF E + +P+ VT R L R
Sbjct: 826 VVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL------------RTLSR---- 869
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
++ I L YA T M++D +V WN ++ + G
Sbjct: 870 -VVKCKKNI---LELKQFKAYA------TKLFMYDD---DGSDVIVWNKALSRFLQRGEA 916
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACM 456
+A++ F M+ V D +TF +L+ + ++ G++ + + + V C+
Sbjct: 917 WEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCL 976
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
++M +AG + A + QM S W ++ C + G
Sbjct: 977 INMYVKAGSVSRARSVFGQMNEVDLIS-WNTMISGCTLSG 1015
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/676 (36%), Positives = 382/676 (56%), Gaps = 14/676 (2%)
Query: 14 QLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
LL +C + A + IH + SG+ + HL ++ Y G A+++F
Sbjct: 436 HLLSACANSSAYADGKMIHEDILRSGIKSNG-HLANALMNMYRRCGSLMEAQNVFEGTQA 494
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
S WN+MI +A +G +L+ M+ + ++ TF VL C + + GK
Sbjct: 495 RDVIS--WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGK 552
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+HG I +G D + AL++MY +CG D VF + RD++SWT MI
Sbjct: 553 QIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQG 612
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+ +A+ LF + Q EG T S+ + + + V Y + + + D + N
Sbjct: 613 EDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN 672
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++++ Y++ G++ AR VFD M RD++SWN ++ GY QNG A+ +MQ D P
Sbjct: 673 ALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVP 732
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N + + L++AC+ + + G++ H I+ ++ D + A++ MYAKCG A+ +F
Sbjct: 733 NKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVF 792
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
++I E+NV +WN +I Y HG KAL FF+ M +EG+KPD TFTSILSAC+HAGL
Sbjct: 793 DNI--IEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGL 850
Query: 431 IDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ EG + F+ M ++ V P ++HY C+V +LGRA EA +I QMP PP+ +VW LL
Sbjct: 851 VLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLL 910
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACRIHG I AAN +L + ++L+SN+YAA+ +W +V K+R M+ +G++K
Sbjct: 911 GACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRK 970
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE I F ADR +P E+Y +++ ++VE++ AGY PD LHD+
Sbjct: 971 EPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAH 1030
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L HSE+LA+A+G++ P +++ KNLR+C DCH+A +FIS + R+II RD+N
Sbjct: 1031 QETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSN 1090
Query: 665 RFHHFEGGTCSCNDYW 680
RFH F+ G CSC DYW
Sbjct: 1091 RFHSFKNGKCSCEDYW 1106
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 257/487 (52%), Gaps = 10/487 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++IH GL N + +G ++ G+ ++A+ F + ++N +I A
Sbjct: 249 KRIHKLTVEEGL-NSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDV--VVYNALIAAL 305
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A +GH VE E Y MR G++ N T+ +L AC+++ + GK++H I G SD
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ AL+ MYA+CG ++F M RDL+SW +I Y + E EA+ L+++ Q E
Sbjct: 366 QIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSE 425
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ VT + + SA + +H + + + + N+++ MY RCG++ +A
Sbjct: 426 GVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA 485
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+ VF+ + RD+ISWNSM+ G+ Q+G A LF EMQN + +P+ +T ++S C
Sbjct: 486 QNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNP 545
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ +LG++ HG I S +++D L NA+++MY +CG L A N+F+ + R+V SW
Sbjct: 546 EALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ--HRDVMSWTA 603
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+I G G KA+E F QM EG +P TF+SIL C+ + +DEG+K A +
Sbjct: 604 MIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSG 663
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL--LACRIHGEIAANY 502
+ + ++ ++G + +A ++ +M P D V W ++ A G+ A +
Sbjct: 664 YELDTGVGNALISAYSKSGSMTDAREVFDKM--PSRDIVSWNKIIAGYAQNGLGQTAVEF 721
Query: 503 LFQLEPE 509
+Q++ +
Sbjct: 722 AYQMQEQ 728
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 253/490 (51%), Gaps = 11/490 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L +C A L ++IHS + +G + + ++ Y G+ AR +F I
Sbjct: 131 YISILTACYSPAELENGKKIHSQIIKAGY-QRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S+ NTM+ YA + E L L+ M GIS + T+ +L A + S++ E
Sbjct: 190 SPRDVVSY--NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE 247
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H + G SD V ALV M +CG D + F + RD+V + +I A Q
Sbjct: 248 GKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQ 307
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EA + + + +G+ + T +S+ +A + + +H + + D+ I
Sbjct: 308 HGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQI 367
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
N++++MYARCG++ KAR +F M KRDLISWN+++ GY + EA+ L+ +MQ+
Sbjct: 368 GNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGV 427
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP VT L L+SAC + G+ H I+ S +K + L NA+M+MY +CG L A+N
Sbjct: 428 KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQN 487
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F R+V SWN +IAG+ HG A + F +M E ++PD+ITF S+LS C +
Sbjct: 488 VFEGTQA--RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNP 545
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
++ G++ +T+ ++ +V +++M R G L +A ++ L D + W A
Sbjct: 546 EALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHS--LQHRDVMSWTA 603
Query: 488 LLLACRIHGE 497
++ C GE
Sbjct: 604 MIGGCADQGE 613
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 261/559 (46%), Gaps = 43/559 (7%)
Query: 12 YDQLLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL++C L ++IH+ + + + + L +I Y A +F +
Sbjct: 30 YVALLQNCTRKRLLPEAKRIHAQMVEA-WVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WN++I YA G + +L+ M+ +G N T+ +L AC S + +
Sbjct: 89 PRRDVIS--WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN 146
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H II+ G+ D VQ +L+ MY KCG +VF +S RD+VS+ M+ Y Q
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+E L LF + EG+ D VT +++ A + + + +H + D+ +
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++V M RCG+V+ A+ F RD++ +N+++ Q+G EA + M++
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
N T L +++AC+ + + G+ H +I D + NA++ MYA+CGDL A
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F + +R++ SWN +IAGY +A+ + QM EGVKP +TF +LSAC+++
Sbjct: 387 LFYTM--PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
+G+ D+ + +K +++M R G L EA ++ + D + W +
Sbjct: 445 SAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT--QARDVISWNS 502
Query: 488 LLLACRIHGEIAANY-LFQ------LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
++ HG Y LFQ LEP++ + ++S
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS---------------------- 540
Query: 541 GLKKPAAFSVIEYGKDIQG 559
G K P A +E GK I G
Sbjct: 541 GCKNPEA---LELGKQIHG 556
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 202/392 (51%), Gaps = 3/392 (0%)
Query: 87 NNGHCVETLE-LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
N HC E + +T + + T+ +L+ C L+ E K +H ++ D
Sbjct: 3 NERHCGPDREDVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDI 62
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ L++MY KC D +VF EM RD++SW +I+ Y Q ++A LF++ Q
Sbjct: 63 FLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNA 122
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G + + +T +S+ +A ++ + +H I + D +QNS+++MY +CG++ +A
Sbjct: 123 GFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRA 182
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VF + RD++S+N+ML Y Q E L LF +M + P+ VT + L+ A T
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G++ H + + D + A++ M +CGD+D+A+ F ++R+V +N
Sbjct: 243 SMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGT--ADRDVVVYNA 300
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
LIA HGH +A E + +M +GV + T+ SIL+ACS + ++ G+ + +++
Sbjct: 301 LIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG 360
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+V+ ++ M R G L +A ++ MP
Sbjct: 361 HSSDVQIGNALISMYARCGDLPKARELFYTMP 392
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/675 (36%), Positives = 400/675 (59%), Gaps = 15/675 (2%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
Q + +F+ QIH+++ SG + +++ ++ Y +G+ A +F ++
Sbjct: 168 QACEDSSFIKLGMQIHAAILKSGRVLD-VYVANALVAMYVRFGKMPEAAVIFGNLEGKDI 226
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ WN+M+ + NG E LE + ++ + + + + ++ A +L GK +H
Sbjct: 227 VT--WNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIH 284
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
I+ GF S+ V L+DMYAKC G + FD M+ +DL+SWT Y Q +
Sbjct: 285 AYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYL 344
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+AL L ++ Q EG+ D+ I S+ A L + K + +HGY I L D +QN+I+
Sbjct: 345 QALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTI-RGGLSDPVLQNTII 403
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
+Y CG ++ A +F+ +E +D++SW SM++ Y+ NG A++AL +F M+ + +P+ V
Sbjct: 404 DVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYV 463
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T + ++SA L + + G++ HG+II ++ ++ N ++DMYA+CG ++ A +F
Sbjct: 464 TLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFT-- 521
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
RN+ W +I+ YGMHG+G A+E F +M +E + PDHITF ++L ACSH+GL++E
Sbjct: 522 CTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNE 581
Query: 434 GRKCFADMTKL--SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
G K F ++ K ++P +HY C+VD+LGR CL EA+ ++K M P VW ALL A
Sbjct: 582 G-KSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGA 640
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIH GE+AA L +L+ ++ G +VL+SN++AA+ +W++V ++R MK GL K
Sbjct: 641 CRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNP 700
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM-AGYMPDLSCALHDVEDEDR 605
S IE G I F + D+++P ++Y+K+ + ++K GY+ LH+V +E++
Sbjct: 701 GCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEK 760
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
ML HSE+LA+A+G++ ++VTKNLRVC DCHS +S + R++IVRDA+R
Sbjct: 761 VQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASR 820
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSC D+W
Sbjct: 821 FHHFKDGMCSCGDFW 835
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 275/538 (51%), Gaps = 24/538 (4%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MR LG S + + + LLK+C + L +IH G + + + ++ Y
Sbjct: 49 MRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYG-CDSFVFVVNSLVALYAKCN 107
Query: 57 EPNTARSLFNSIH--NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
+ N AR LF+ ++ ND WN++I AY+ NG C E L L+S M ++G+ +N+YTF
Sbjct: 108 DINGARKLFDRMYVRND---VVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFA 164
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
L+AC +S I G +H I+++G + D YV ALV MY + G+ + +F + +
Sbjct: 165 AALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGK 224
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
D+V+W M+T + Q EAL F Q L D V+I+S+ A G+LG +L + +H
Sbjct: 225 DIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIH 284
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
YAI N F ++ + N+++ MYA+C + FD+M +DLISW + GY QN
Sbjct: 285 AYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYL 344
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
+AL L ++Q + ++ AC L ++ HGY I + D L+N ++
Sbjct: 345 QALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTII 403
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
D+Y +CG +D A +F I ++V SW +I+ Y +G KALE FS M E G++PD
Sbjct: 404 DVYGECGIIDYAVRIFESIEC--KDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPD 461
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
++T SILSA + +G++ + + E +VDM R G + +A+ +
Sbjct: 462 YVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFT 521
Query: 475 QMPLPPNDSVWGALLLACRIH--GEIAANYLFQLE-----PEHTGYFVLMSNIYAASN 525
N +W A++ A +H GE A +++ P+H + L+ YA S+
Sbjct: 522 CTK-NRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALL---YACSH 575
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 235/459 (51%), Gaps = 14/459 (3%)
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
F WN M+ Y +NG + LE+Y MR G+S +SYTFP +LKAC + G +HG
Sbjct: 24 FTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGL 83
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKPEE 194
I+ G S +V +LV +YAKC + K+FD M VR D+VSW +I+AY E
Sbjct: 84 AIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTE 143
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL LF + + G+++++ T + A + +H + + + D+ + N++VA
Sbjct: 144 ALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVA 203
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY R G + +A ++F +E +D+++WNSMLTG+IQNG SEAL F ++QN+D KP+ V+
Sbjct: 204 MYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVS 263
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+ ++ A LG G++ H Y I + + + N ++DMYAKC + F+ +
Sbjct: 264 IISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLM- 322
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
+ +++ SW AGY + +ALE Q+ EG+ D SIL AC + +
Sbjct: 323 -AHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKI 381
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
++ + + V ++D+ G G + A + + + D V +++C +
Sbjct: 382 KEIHGYTIRGGLSDPVLQNT-IIDVYGECGIIDYAVRIFESIEC--KDVVSWTSMISCYV 438
Query: 495 HGEIAANYL--------FQLEPEHTGYFVLMSNIYAASN 525
H +A L LEP++ ++S + + S
Sbjct: 439 HNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLST 477
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 170/332 (51%), Gaps = 12/332 (3%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY KCG D +FD+MS R + +W M+ Y + AL ++++ + G+ DS T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAI---CNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
+ A G + D+ +HG AI C++F+ + NS+VA+YA+C ++ AR +FD
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFV---FVVNSLVALYAKCNDINGARKLFD 117
Query: 271 MMEKR-DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
M R D++SWNS+++ Y NG +EAL LF EM + N T + AC +
Sbjct: 118 RMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIK 177
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
LG + H I+ S +D + NA++ MY + G + A +F ++ +++ +WN ++ G
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEG--KDIVTWNSMLTG 235
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
+ +G +ALEFF + +KPD ++ SI+ A G + G++ A K
Sbjct: 236 FIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295
Query: 450 VKHYACMVDMLGRAGCLY---EAFDMIKQMPL 478
+ ++DM + C+ AFD++ L
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDL 327
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/662 (38%), Positives = 383/662 (57%), Gaps = 12/662 (1%)
Query: 29 HSSLTTSGLINQALHLGAKI--IIKYTTYGEPNTARSLFNSIHND--KSYSFLWNTMIRA 84
H+ L L+ LH + II +T N A+ H S +FL+NTMIR
Sbjct: 19 HAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRG 78
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ + LY++M ++ I +S+TF FVLKACA +L G ++H + +TGF D
Sbjct: 79 MVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCD 138
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V+ +V Y+KCG D KVFD+M V+++VSWT MI + K EA+ LF+ +
Sbjct: 139 VFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLE 198
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
GL D IV V A +LGD+ + + ++ + S+V MY +CG++E+
Sbjct: 199 SGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEE 258
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
AR VFD M ++D++ W++M+ GY NG EA+ LF EM+ + +P+ + +S+C
Sbjct: 259 ARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCAS 318
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
LG+ +LG G + + L +++D YAKCG ++ A ++ + +R V +N
Sbjct: 319 LGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVV--FN 376
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-K 443
+I+G M+G A F QM + G+ P+ TF +L C+HAGL+D+GR F M+
Sbjct: 377 AVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHD 436
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI----- 498
SV P ++HY CMVD+L RAG L EA ++IK MP+ N VWG+LL CR+H E
Sbjct: 437 FSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEH 496
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
L +LEP ++G++VL+SNIY+AS +W E K+R + KG++K +S +E +
Sbjct: 497 VLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVH 556
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D +P +++Y+K+ES+ ++K AGY P L DVE+E++EH L HSEKLAV
Sbjct: 557 EFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEKLAV 616
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AF +++ + V++V KNLRVC DCH A + IS + R+I++RD NRFH F G CSC D
Sbjct: 617 AFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACSCRD 676
Query: 679 YW 680
YW
Sbjct: 677 YW 678
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 246/673 (36%), Positives = 386/673 (57%), Gaps = 12/673 (1%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
++ S N L +QIH ++ G +Q + + I Y G N AR +F +
Sbjct: 306 VVASLNHLELGKQIHGAVVRFGW-DQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLI 364
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS-NSLILEGKVVH 133
S WNT+I A +G +L L+ + RSG+ + +T VL+AC+S G+ VH
Sbjct: 365 S--WNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
++ G + DS+V AL+D+Y+K G+ ++ +F DL SW M+ + ++
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EAL LF + G +D +T + A A G L + + + +H I F DL + + I+
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
MY +CG ++ AR VF+ + D ++W ++++G ++NG+ +AL + +M+ + +P+
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T LV AC+ L + + G++ H I+ N D + +++DMYAKCG+++ A +F +
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
+ R+V+ WN +I G HG+ +AL FF++M GV PD +TF +LSACSH+GL +
Sbjct: 663 NT--RSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSD 720
Query: 434 GRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
K F M K V+PE++HY+C+VD L RAG + EA ++ MP + +++ LL AC
Sbjct: 721 AYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNAC 780
Query: 493 RIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+ G E A LF ++P + +VL+SNIYAA+N+W R MK +KK
Sbjct: 781 RVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPG 840
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
FS I+ + F DR + +Y KVE + IK GY+PD AL D+E+ED+E
Sbjct: 841 FSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKES 900
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
L+YHSEKLA+A+G+M P ++V KNLRVC DCH+A ++IS +++R+I++RDANRFH
Sbjct: 901 ALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFH 960
Query: 668 HFEGGTCSCNDYW 680
HF G CSC DYW
Sbjct: 961 HFRSGICSCGDYW 973
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 229/443 (51%), Gaps = 10/443 (2%)
Query: 70 NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
+D S +WN + +Y G E ++ + M +S + +S T+ +L AS + + G
Sbjct: 257 DDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELG 316
Query: 130 KVVHGDIIRTGFLSDSYVQAA--LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
K +HG ++R G+ D +V A ++MY K G + ++F +M DL+SW +I+
Sbjct: 317 KQIHGAVVRFGW--DQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCA 374
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD-VLKAQAVHGYAICNAFLEDL 246
++ E +L LF + GLL D TI SV A L + + VH A+ + D
Sbjct: 375 RSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS 434
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ +++ +Y++ G +E+A L+F + DL SWN+M+ G+ + EAL LF M
Sbjct: 435 FVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHER 494
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
K + +T A L Q G++ H +I D + + ++DMY KCG++ +A
Sbjct: 495 GEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSA 554
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+FN I PS +V +W +I+G +G +AL + QM GV+PD TF +++ ACS
Sbjct: 555 RKVFNQI-PSPDDV-AWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACS 612
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+++G++ A++ KL+ + +VDM + G + +A+ + ++M + ++W
Sbjct: 613 LLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMN-TRSVALWN 671
Query: 487 ALLLACRIHG--EIAANYLFQLE 507
A+++ HG E A N+ +++
Sbjct: 672 AMIVGLAQHGNAEEALNFFNEMK 694
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 188/408 (46%), Gaps = 38/408 (9%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++ H+ + TSGL N ++ +I Y G +AR LF+ +N ++ AY
Sbjct: 33 KRTHAVIVTSGL-NPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 86 ANNG--HCVE----TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
A+ G H VE ++ +R+S + + +T + K C + + G ++
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
G D +V ALV++YAK + + +FD M VRD+V W VM+ AY + +E L LF
Sbjct: 152 GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKA-QAVHGYAICNAFLEDLCIQNSIVAMYAR 258
+ GL D V++ ++ VG+ + + V YA F+ D
Sbjct: 212 SAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYAT-KLFVCD------------- 257
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
+ D+ WN L+ Y+Q G+ EA+ F +M S + +T +++
Sbjct: 258 --------------DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVI 303
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+S L +LG++ HG ++ ++ N+ ++MY K G ++ A MF + E
Sbjct: 304 LSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQM--KEV 361
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
++ SWN +I+G G +L F +L G+ PD T TS+L ACS
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACS 409
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 174/386 (45%), Gaps = 41/386 (10%)
Query: 102 RRSGISSNSYT---FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC 158
R+ +S +S F + A A + LIL GK H I+ +G D YV L+ MYAKC
Sbjct: 3 RKCSVSPSSLLPQWFSILRHAIADSDLIL-GKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61
Query: 159 GQTDDGCKVFD--EMSVRDLVSWTVMITAYEQA------EKPEEALILFQKTQQEGLLSD 210
G K+FD S RDLV++ ++ AY EK EA +F+ +Q +L+
Sbjct: 62 GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTT 121
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
T+ + G ++A+ GYA+ D+ + ++V +YA+ + +AR++FD
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFD 181
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M RD++ WN M+ Y++ G E L LF S +P+ V+ ++ +
Sbjct: 182 RMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMG--------V 233
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G+K + ++ +R ++ C D + +V+ WN ++ Y
Sbjct: 234 GKK---TVFERELE---QVRAYATKLFV-CDD--------------DSDVTVWNKTLSSY 272
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
G G +A++ F M++ V D +T+ ILS + ++ G++ + + V
Sbjct: 273 LQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFV 332
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQM 476
++M +AG + A M QM
Sbjct: 333 SVANSAINMYVKAGSVNYARRMFGQM 358
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 258/705 (36%), Positives = 385/705 (54%), Gaps = 44/705 (6%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L C +A+ Q+H S+ GL + + + +I Y G + +F +
Sbjct: 137 VLSGCTKIAAFCEGIQVHGSVVKMGL-EEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER 195
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W ++I YA E + L+ M +GI +S T V+ ACA + G+
Sbjct: 196 NVVS--WTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGER 253
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
V I G + + ALVDMY KCG D ++FDE R+LV + +++ Y +
Sbjct: 254 VCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGL 313
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EAL + + Q+G D VT++S SA QL D+ + HGY I N I N
Sbjct: 314 AREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNV 373
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS----------------- 294
I+ MY +CG E A VFD+M + ++SWNS+ G+I+NG
Sbjct: 374 IIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFW 433
Query: 295 --------------EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
+A+ LF EMQ K + VT + + SAC YLG+ +L + H YI
Sbjct: 434 NTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEK 493
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ + D L A++DM+A+CGD +A +FN + +ER+VS+W I M G+G A
Sbjct: 494 NGIPCDMRLNTALVDMFARCGDPQSAMQVFNKM--TERDVSAWTAAIGTMAMEGNGEGAT 551
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
F+QML +GVKPD + F +L+ACSH G +++G F+ M + P+++HY CMVD+L
Sbjct: 552 GLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLL 611
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFV 515
GRAG L EAFD+IK MP+ PND VWG+LL ACR+H + AA + +L P+ G V
Sbjct: 612 GRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHV 671
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNIYA++ KW +V ++R +++ KG++K S ++ I F + D +P +
Sbjct: 672 LLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIAL 731
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
++ M AG++PDLS L DV+++++E++L+ HSEKLA+AFG++ ++V K
Sbjct: 732 MLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVK 791
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLR+C+DCHS + S IY R+IIVRD NRFH F G CSC DYW
Sbjct: 792 NLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 261/533 (48%), Gaps = 43/533 (8%)
Query: 13 DQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSLFNSIH 69
++ L+ C L L+Q+H +T +GL +Q K++ P + AR F
Sbjct: 29 NESLRCCKTLNQLKQLHCQITKNGL-DQIPSTLTKLVNAGAEIASPESLDYARKAFELFK 87
Query: 70 NDKSYS---FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
D F+ N++IR Y++ G E + LY M G++ N YTFPFVL C +
Sbjct: 88 EDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAF 147
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
EG VHG +++ G D ++Q L+ YA+CG D G KVF+ MS R++VSWT +I Y
Sbjct: 148 CEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGY 207
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ ++P+EA+ LF + + G+ SVT+V V SA +L D+ + V Y +
Sbjct: 208 ARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNK 267
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N++V MY +CG ++ A+ +FD R+L+ +N++L+ Y + G A EAL + DEM
Sbjct: 268 VMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQ 327
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC------ 360
+P+ VT L +SA L G+ HGY+I + ++ ++ N ++DMY KC
Sbjct: 328 GPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMA 387
Query: 361 -------------------------GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
GD+++A +FN I ERN WN +I+G
Sbjct: 388 CRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQI--PERNAVFWNTMISGLVQKSL 445
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
A+E F +M EG+K D +T I SAC + G + + + K + +++
Sbjct: 446 FEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTA 505
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLFQL 506
+VDM R G A + +M + S W A + +A +GE A Q+
Sbjct: 506 LVDMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMAMEGNGEGATGLFNQM 557
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/659 (38%), Positives = 380/659 (57%), Gaps = 12/659 (1%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H L G +Q +G ++ Y A +F+ + + S WN+MI +
Sbjct: 218 VHGLLEKLGFGSQCA-VGNALMAFYAKSNRTKDAILVFDGMPHRDVIS--WNSMISGCTS 274
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
NG + +EL+ M G +S T VL ACA L+ G+VVHG ++TGF+S + +
Sbjct: 275 NGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSL 334
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
L+DMY+ C K+F M +++VSWT MIT+Y +A ++ LFQ+ EG
Sbjct: 335 ANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGT 394
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
D I S A + ++VHGYAI N + L + N+++ MY +CGN+E+A+L
Sbjct: 395 RPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKL 454
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
+FD + +D+ISWN+++ GY +N A+EA LF EM +PN VT ++ A L S
Sbjct: 455 IFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML-LQLRPNAVTMTCILPAAASLSS 513
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
+ GR+ H Y + D + NA++DMY KCG L A +F+ + S +N+ SW +++
Sbjct: 514 LERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRL--SNKNLISWTIMV 571
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SV 446
AGYGMHG GR A+ F QM G+ PD +F++IL ACSH+GL DEG + F M K +
Sbjct: 572 AGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKI 631
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAAN 501
+P +KHY CMVD+L G L EA++ I MP+ P+ S+W +LL CRIH E A
Sbjct: 632 EPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAE 691
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
+F+LEPE+TGY+VL++NIYA + +W V KL+ + +GL++ S IE + F
Sbjct: 692 RVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFI 751
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
+R +P + + + +A ++ G+ P AL ++ L HS KLAVAFG
Sbjct: 752 ADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFG 811
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++NL+ +++VTKN RVC+ CH A +FIS + R+II+RD+NRFHHFE G CSC YW
Sbjct: 812 VLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/554 (28%), Positives = 261/554 (47%), Gaps = 52/554 (9%)
Query: 12 YDQLLKSCNFLASL---RQIH-----SSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
Y +L+ C+ + SL ++ H SSL G+ N LG K+++ Y G+ AR
Sbjct: 94 YGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNV---LGQKLVLMYLKCGDLENARR 150
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+ + +W ++ YA G E + L+ M G+ ++YT VLK A
Sbjct: 151 VFDEMPQVSDVR-VWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGL 209
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
I +G+VVHG + + GF S V AL+ YAK +T D VFD M RD++SW MI
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI 269
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
+ ++A+ LF + EG DS T++SV A +L + + VHGY++ F+
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFI 329
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ N ++ MY+ C + +F M +++++SW +M+T Y + G + LF EM
Sbjct: 330 SQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEM 389
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQL---GRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+P+ + SA +L G+ HGY I + M+ + NA+M+MY KC
Sbjct: 390 GLEGTRPD---IFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKC 446
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G+++ A+ +F+ + +++ SWN LI GY + +A F++ML + ++P+ +T T
Sbjct: 447 GNMEEAKLIFDGV--VSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTC 503
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
IL A + ++ GR+ A + + ++DM +
Sbjct: 504 ILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKC----------------- 546
Query: 481 NDSVWGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GALLLA R+ ++ L + +M Y + R+ L E M+
Sbjct: 547 -----GALLLARRLFDRLSNKNLIS--------WTIMVAGYGMHGRGRDAIALFEQMRVS 593
Query: 541 GLKKPAA-FSVIEY 553
G+ AA FS I Y
Sbjct: 594 GIAPDAASFSAILY 607
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/661 (35%), Positives = 384/661 (58%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ IH + SG+ + HL ++ Y G A+++F S WN+MI +
Sbjct: 506 KMIHEDILRSGIKSNG-HLANALMNMYRRCGSIMEAQNVFEGTRARDIIS--WNSMIAGH 562
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A +G +L+ M++ G+ + TF VL C + + G+ +H II +G D
Sbjct: 563 AQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDV 622
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ AL++MY +CG D +VF + R+++SWT MI + + +A LF + Q +
Sbjct: 623 NLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQND 682
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G T S+ A + + + V + + + + D + N++++ Y++ G++ A
Sbjct: 683 GFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDA 742
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VFD M RD++SWN M+ GY QNG AL +MQ N + + +++AC+
Sbjct: 743 RKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSF 802
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H I+ M+ D + A++ MYAKCG L+ A+ +F++ +E+NV +WN
Sbjct: 803 SALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF--TEKNVVTWNA 860
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKL 444
+I Y HG KAL+FF+ M +EG+KPD TFTSILSAC+H+GL+ EG + F+ + ++
Sbjct: 861 MINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQH 920
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA----- 499
+ P ++HY C+V +LGRAG EA +I QMP PP+ +VW LL ACRIHG +A
Sbjct: 921 GLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHA 980
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
AN +L + +VL+SN+YAA+ +W +V K+R M+ +G++K S IE I
Sbjct: 981 ANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHE 1040
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F ADR +P E+Y++++ +++E++ AGY PD LH+++ E +E L HSE+LA+A
Sbjct: 1041 FIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIA 1100
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
+G++ P +++ KNLR+C DCH+A +FIS + R+II RD+NRFH F+ G CSC D+
Sbjct: 1101 YGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDF 1160
Query: 680 W 680
W
Sbjct: 1161 W 1161
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 234/452 (51%), Gaps = 5/452 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++IH GL N + +G + + G+ A+ + + ++N +I A
Sbjct: 304 KRIHKLAVNEGL-NSDIRVGTALATMFVRCGDVAGAKQALEAFADRDV--VVYNALIAAL 360
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A +GH E E Y MR G+ N T+ VL AC+++ + G+++H I G SD
Sbjct: 361 AQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDV 420
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ +L+ MYA+CG ++F+ M RDL+SW +I Y + E EA+ L+++ Q E
Sbjct: 421 QIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSE 480
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ VT + + SA + +H + + + + N+++ MY RCG++ +A
Sbjct: 481 GVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEA 540
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+ VF+ RD+ISWNSM+ G+ Q+G A LF EM+ +P+ +T ++ C
Sbjct: 541 QNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNP 600
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ +LGR+ H II S +++D L NA+++MY +CG L A +F+ + RNV SW
Sbjct: 601 EALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR--HRNVMSWTA 658
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+I G+ G RKA E F QM +G KP TF+SIL AC + +DEG+K A +
Sbjct: 659 MIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSG 718
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ + ++ ++G + +A + +MP
Sbjct: 719 YELDTGVGNALISAYSKSGSMTDARKVFDKMP 750
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 247/468 (52%), Gaps = 8/468 (1%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L +C A L ++IHS + +G + + ++ Y + +AR +F+ I
Sbjct: 186 YISILTACCSPAELEYGKKIHSKIIEAGY-QRDPRVQNSLLNMYGKCEDLPSARQVFSGI 244
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ S+ NTM+ YA + E + L+ M GI + T+ +L A + S++ E
Sbjct: 245 YRRDVVSY--NTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE 302
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H + G SD V AL M+ +CG + + + RD+V + +I A Q
Sbjct: 303 GKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQ 362
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEA + + + +G++ + T +SV +A + + +H + D+ I
Sbjct: 363 HGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQI 422
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
NS+++MYARCG++ +AR +F+ M KRDLISWN+++ GY + EA+ L+ +MQ+
Sbjct: 423 GNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGV 482
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP VT L L+SACT + G+ H I+ S +K + L NA+M+MY +CG + A+N
Sbjct: 483 KPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQN 542
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F R++ SWN +IAG+ HG A + F +M +EG++PD ITF S+L C +
Sbjct: 543 VFEGTRA--RDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNP 600
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
++ GR+ + + ++ +V +++M R G L +A+++ +
Sbjct: 601 EALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSL 648
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 245/504 (48%), Gaps = 9/504 (1%)
Query: 12 YDQLLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y L+++C LA ++IH+ + +G + + L +I Y + A +F +
Sbjct: 85 YVDLVQNCTRKRSLAEAKRIHAQMVEAG-VGPDIFLSNLLINMYVKCRSVSDAHQVFLKM 143
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WN++I YA G + +L+ M+ +G + T+ +L AC S + +
Sbjct: 144 PRRDVIS--WNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEY 201
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H II G+ D VQ +L++MY KC +VF + RD+VS+ M+ Y Q
Sbjct: 202 GKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQ 261
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EE + LF + EG+ D VT +++ A + + + +H A+ D+ +
Sbjct: 262 KAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRV 321
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++ M+ RCG+V A+ + RD++ +N+++ Q+G EA + +M++
Sbjct: 322 GTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGV 381
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
N T L +++AC+ + G H +I D + N+++ MYA+CGDL A
Sbjct: 382 VMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARE 441
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+FN + +R++ SWN +IAGY +A++ + QM EGVKP +TF +LSAC+++
Sbjct: 442 LFNTM--PKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNS 499
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
+G+ D+ + +K +++M R G + EA ++ + S W ++
Sbjct: 500 SAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIIS-WNSM 558
Query: 489 LLACRIHGEIAANYLFQLEPEHTG 512
+ HG A Y LE + G
Sbjct: 559 IAGHAQHGSYEAAYKLFLEMKKEG 582
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 187/370 (50%), Gaps = 2/370 (0%)
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+N + +++ C + E K +H ++ G D ++ L++MY KC D +V
Sbjct: 80 TNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQV 139
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F +M RD++SW +I+ Y Q ++A LF++ Q G + +T +S+ +A ++
Sbjct: 140 FLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAEL 199
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ +H I + D +QNS++ MY +C ++ AR VF + +RD++S+N+ML Y
Sbjct: 200 EYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLY 259
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
Q E + LF +M + P+ VT + L+ A T G++ H +N + D
Sbjct: 260 AQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDI 319
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ A+ M+ +CGD+ A+ ++R+V +N LIA HGH +A E + QM
Sbjct: 320 RVGTALATMFVRCGDVAGAKQALEAF--ADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
+GV + T+ S+L+ACS + + G + ++++ +V+ ++ M R G L
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLP 437
Query: 468 EAFDMIKQMP 477
A ++ MP
Sbjct: 438 RARELFNTMP 447
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+ SE L + Q + N + LV CT S ++ H ++ + + D L N
Sbjct: 62 RGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSN 121
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
+++MY KC + A +F + R+V SWN LI+ Y G +KA + F +M G
Sbjct: 122 LLINMYVKCRSVSDAHQVF--LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGF 179
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
P IT+ SIL+AC ++ G+K + + + + + + +++M G+
Sbjct: 180 IPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGK 230
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/664 (36%), Positives = 389/664 (58%), Gaps = 69/664 (10%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI-IIKYTTYGEPNTARSLFNSIHNDKS 73
LL +C +L+QIHS + +GL N L I + +G + A LF SI ++
Sbjct: 38 LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESI--EQP 95
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F+WNTMIR + + V ++ Y M G+ NSYTFPF+LK+CA EGK +H
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQT-------------------------------D 162
G +++ G SD +V +L++MYA+ G+ D
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
D ++F+E+ VRD VSW MI Y Q+ + EEAL FQ+ ++ + + T+V+V SA
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
Q G + V + + +L + N+++ MY++CG+++KAR +F+ + ++D+ISWN
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ GY EAL LF +MQ S+ +PN VT + ++ AC YLG+ LG+ H YI
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF 395
Query: 343 MKI-DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + + +L +++DMYAKCG+++ A+ +F + P +++ SWN +I+G MHGH ALE
Sbjct: 396 LGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKP--KSLGSWNAMISGLAMHGHANMALE 453
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
F QM +EG +PD ITF +LSACSHAGL++ GR+CF+ M + + P+++HY CM+D+L
Sbjct: 454 LFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLL 513
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GRAG EA ++K M + P+ ++WG+LL ACR+H GE AA +LF+LEPE+ G +V
Sbjct: 514 GRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYV 573
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNIYA + +W +V ++R + +KG+KK +++YK
Sbjct: 574 LLSNIYATAGRWDDVARIRTKLNDKGMKKX-------------------------QDIYK 608
Query: 576 KVESMAVEI-KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
++ + + G +PD S L+D+++E +E L++HSEKLA+AFG+++ PE +++
Sbjct: 609 MLDEIDQSFGERPGXVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIV 668
Query: 635 KNLR 638
KNLR
Sbjct: 669 KNLR 672
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/643 (37%), Positives = 380/643 (59%), Gaps = 10/643 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G +I Y G N+AR F++I S W M+ YA N ++L+L++ MR
Sbjct: 78 VGTALIDAYAVCGSVNSARQAFDAIACKDMVS--WTGMVACYAENDRFQDSLQLFAEMRM 135
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
G + N +TF VLKAC GK VHG +++T + D YV L+D+Y K G +D
Sbjct: 136 VGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDAND 195
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
+VF+EM D++ W+ MI+ Y Q+ + EA+ LF + ++ +L + T SV +
Sbjct: 196 VLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCAS 255
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ ++ + VH + + ++ + N+++ +YA+CG ++ + +F + R+ ++WN+M
Sbjct: 256 IENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTM 315
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ GY+Q+G +AL L+ M + + VT ++ AC L + +LG + H + +
Sbjct: 316 IVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIY 375
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
D + NA++DMYAKCG + A +F+ + SER+ SWN +I+GY MHG +AL+ F
Sbjct: 376 DKDVVVGNALIDMYAKCGSIKNARLVFDML--SERDEISWNAMISGYSMHGLVGEALKAF 433
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGR 462
M E P+ +TF SILSACS+AGL+D G+ F M + ++P ++HY CMV +LGR
Sbjct: 434 QMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGR 493
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLM 517
+G L +A +I+++PL PN VW ALL AC IH G ++A + Q++P+ VL+
Sbjct: 494 SGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLL 553
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SNIYA + +W V +R+ MKNKG+KK S IE + F D +P K + +
Sbjct: 554 SNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGML 613
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
E + ++ + AGY+PDL+ L DVED++++ L HSE+LA+AFG++ +++ KNL
Sbjct: 614 EWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNL 673
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
R+C DCHSA + IS I +R II+RD NRFHHF+ G CSC DYW
Sbjct: 674 RICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 217/399 (54%), Gaps = 11/399 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MR +G + F + +LK+C L + + +H + + L++G ++ YT +G
Sbjct: 133 MRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKT-CYEMDLYVGVGLLDLYTKFG 191
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+ N +F + K W+ MI YA + E +EL+ MRR+ + N +TF V
Sbjct: 192 DANDVLRVFEEM--PKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASV 249
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L++CAS + GK VH +++ G + +V AL+D+YAKCG+ D+ K+F E+ R+
Sbjct: 250 LQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNE 309
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
V+W MI Y Q+ ++AL L++ + + + VT SV A L + +H
Sbjct: 310 VTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSL 369
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
++ + +D+ + N+++ MYA+CG+++ ARLVFDM+ +RD ISWN+M++GY +G EA
Sbjct: 370 SLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEA 429
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVM 354
L F MQ ++C PN +T + ++SAC+ G +G+ + ++ + I+ + + ++
Sbjct: 430 LKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQ-DYGIEPCMEHYTCMV 488
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+ + G LD A + +I P E NV W L+ +H
Sbjct: 489 WLLGRSGHLDKAVKLIEEI-PLEPNVKVWRALLGACVIH 526
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 222/434 (51%), Gaps = 10/434 (2%)
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
T+I+ Y + E ++L+S + R G N + F +LK S +H I +
Sbjct: 11 TLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKL 70
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
G S+++V AL+D YA CG + + FD ++ +D+VSWT M+ Y + ++ +++L LF
Sbjct: 71 GHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLF 130
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ + G + T V A L ++VHG + + DL + ++ +Y +
Sbjct: 131 AEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKF 190
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G+ VF+ M K D+I W+ M++ Y Q+ Q+ EA+ LF +M+ + PN T ++
Sbjct: 191 GDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVL 250
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+C + + QLG++ H +++ + + + NA+MD+YAKCG LD + +F ++ RN
Sbjct: 251 QSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMEL--PNRN 308
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
+WN +I GY G G KAL + MLE V+ +T++S+L AC+ ++ G + +
Sbjct: 309 EVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHS 368
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHG 496
K +V ++DM + G + A FDM+ + ++ W A++ +HG
Sbjct: 369 LSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSE----RDEISWNAMISGYSMHG 424
Query: 497 EIA-ANYLFQLEPE 509
+ A FQ+ E
Sbjct: 425 LVGEALKAFQMMQE 438
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 2/206 (0%)
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M R+ +S+ +++ GY+Q+ Q E + LF + + NP ++ + +L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
H I + +A + A++D YA CG +++A F+ I + +++ SW ++A Y
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAI--ACKDMVSWTGMVACYA 118
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
+ + +L+ F++M G P+H TF +L AC G+ + K + ++
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMP 477
++D+ + G + + ++MP
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMP 204
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/675 (36%), Positives = 385/675 (57%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C + L +Q+HS L +G+ + G+ + + Y G A +F S D
Sbjct: 250 LLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDL-YVKCGVIVEALEIFKS--GD 306
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
++ LWN M+ AY ++ +L+ M +G+ N +T+P +L+ C I G+
Sbjct: 307 RTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQ 366
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+TGF SD YV L+DMY+K G D ++ + + +D+VSWT MI Y Q E
Sbjct: 367 IHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEF 426
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+EAL F+ Q G+ D++ + S SA + + + Q +H + + D+ I N+
Sbjct: 427 CKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNA 486
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V +YARCG ++A +F+ +E +D I+WN M++G+ Q+G EAL +F +M + K N
Sbjct: 487 LVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYN 546
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + +SA L + G++ H +I + + + NA++ +Y KCG ++ A+ F
Sbjct: 547 VFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFF 606
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ SERN SWN +I HG G +AL+ F QM +EG+KP+ +TF +L+ACSH GL+
Sbjct: 607 EM--SERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 664
Query: 432 DEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F M ++ + P HYAC+VD+LGRAG L A +++MP+ N VW LL
Sbjct: 665 EEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLS 724
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACR+H GE+AA YL +LEP + +VL+SN YA + KW +R+ MK++G++K
Sbjct: 725 ACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKE 784
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F DR++P ++YK + + + GY+ H+ E E +
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQK 844
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ HSEKLAVAFG+M+L P ++V KNLRVCNDCH+ +F S + R+I++RD R
Sbjct: 845 DPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYR 904
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G CSC D+W
Sbjct: 905 FHHFNNGNCSCGDFW 919
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/474 (28%), Positives = 229/474 (48%), Gaps = 18/474 (3%)
Query: 16 LKSCNFLASLRQ-------------IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
L S +F +LR+ IH+ T GL + G +I Y G AR
Sbjct: 39 LGSVDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRI-AGNLLIDLYAKKGLVQRAR 97
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F + + S W M+ YA NG E + LY M SG+ Y VL AC
Sbjct: 98 RVFEQLSARDNVS--WVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTK 155
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
+L +G++VH + + G S++ V AL+ +Y + G +VF EM D V++ +
Sbjct: 156 AALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTL 215
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I+ + Q E AL +F++ + G D VTI S+ +A +GD+ K + +H Y +
Sbjct: 216 ISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGM 275
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
D I+ S++ +Y +CG + +A +F ++ +++ WN ML Y Q +++ LF +
Sbjct: 276 SPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQ 335
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M + +PN T L+ CTY G LG + H I + + D + ++DMY+K G
Sbjct: 336 MVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGW 395
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
LD A + + ++V SW +IAGY H ++ALE F M G+ PD+I S +
Sbjct: 396 LDKARRILEVLEA--KDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAI 453
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
SAC+ + +G++ + + +V + +V++ R G EAF + + +
Sbjct: 454 SACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAI 507
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 253/528 (47%), Gaps = 48/528 (9%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H+ + G ++ + +G +I Y +G + A +F+ + +F NT+I +
Sbjct: 163 RLVHAQVYKQGSCSETV-VGNALIALYLRFGSLSLAERVFSEMPYCDRVTF--NTLISRH 219
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A G+ LE++ MR SG + + T +L ACAS + +GK +H +++ G D
Sbjct: 220 AQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDY 279
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ +L+D+Y KCG + ++F ++V W +M+ AY Q ++ LF +
Sbjct: 280 IIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAA 339
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + T + G++ + +H +I F D+ + ++ MY++ G ++KA
Sbjct: 340 GVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKA 399
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R + +++E +D++SW SM+ GY+Q+ EAL F +MQ P+ + +SAC +
Sbjct: 400 RRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGI 459
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H + S D ++ NA++++YA+CG A ++F I ++ +WN
Sbjct: 460 KAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDK--ITWNG 517
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+++G+ G +ALE F +M + GVK + TF S +SA ++ I +G++ A + K
Sbjct: 518 MVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTG 577
Query: 446 VKPEVKHYACMVDMLGRAGCLYEA----------------------------------FD 471
E + ++ + G+ G + +A FD
Sbjct: 578 CTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFD 637
Query: 472 MIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSN 519
+KQ L PND + +L AC G L E GYF MS+
Sbjct: 638 QMKQEGLKPNDVTFIGVLAACSHVG---------LVEEGLGYFKSMSS 676
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 7/209 (3%)
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ-- 329
M +R S N LTG++ + + L LF V + C GS +
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECR--GSVKHW 58
Query: 330 -LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
L H I + D N ++D+YAK G + A +F + S R+ SW +++
Sbjct: 59 PLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL--SARDNVSWVAMLS 116
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
GY +G G +A+ + QM GV P +S+LSAC+ A L ++GR A + K
Sbjct: 117 GYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCS 176
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
E ++ + R G L A + +MP
Sbjct: 177 ETVVGNALIALYLRFGSLSLAERVFSEMP 205
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/675 (37%), Positives = 380/675 (56%), Gaps = 60/675 (8%)
Query: 17 KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP-----NTARSLFNSIHND 71
KS L L Q+H+ + SG GA + Y P + A +F+SI N
Sbjct: 41 KSITSLQYLTQLHALVLRSGHFQDHYVSGALL----KCYANPHFSNFDFALKVFSSIPNP 96
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
F+WN +I+ N + + Y M N +T+P + KAC+ + EG+
Sbjct: 97 NV--FIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQ 153
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG +++ G SD ++++A + MYA G+ +D K+F D+V W MI Y +
Sbjct: 154 IHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGV 212
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E A LF + + + S +V I +A
Sbjct: 213 LEAAKGLFAQMPVKNIGSWNVMINGLA--------------------------------- 239
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ GN+ AR +FD M +RD ISW+SM+ GYI G+ EAL +F +MQ + +P
Sbjct: 240 ------KGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+++AC+ +G+ GR H Y+ +++K+DA L A++DMYAKCG LD +F
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ ER + +WN +I G +HG ALE FS++ E +KP+ IT +L+AC+HAG +
Sbjct: 354 EM--KEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV 411
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
D+G + F M + V PE++HY CMVD+LGR+G EA D+I MP+ PN +VWGALL
Sbjct: 412 DKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLG 471
Query: 491 ACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRIHG E L +LEP+++G +VL+SNIYA ++ +V K+R+ MKN+G+K
Sbjct: 472 ACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTV 531
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S+++ + F D +P KE+Y+K++ + ++MAG+ PD S L D+++E++
Sbjct: 532 PGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEK 591
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +NYHSEKLA+AFG++N P + + KNLRVC+DCHSA + IS I+ R+IIVRD R
Sbjct: 592 ETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVR 651
Query: 666 FHHFEGGTCSCNDYW 680
+HHF+ GTCSC D+W
Sbjct: 652 YHHFKNGTCSCKDFW 666
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 261/694 (37%), Positives = 406/694 (58%), Gaps = 29/694 (4%)
Query: 6 PSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P + + +LK+C+ LA L R IH+ GL + L + +I Y A
Sbjct: 96 PPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGL-HTDLFVSTALIDLYIRCARFGPAA 154
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNG---HCVETLELYSTMRRSGISSNSYTFPFVLKA 119
++F + + WN M+ YAN+G H + L R G+ N+ T +L
Sbjct: 155 NVFAKMPMRDVVA--WNAMLAGYANHGMYHHAIA--HLLDMQDRGGLRPNASTLVSLLPL 210
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQ----AALVDMYAKCGQTDDGCKVFDEMSVRD 175
A + + +G VH +R +L + Q AL+DMYAKC C+VF M+VR+
Sbjct: 211 LAQHGALFQGTSVHAYCLRA-YLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRN 269
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV---GQLGDVLKAQA 232
V+W+ +I + ++ EA LF+ EG+ S T SVASA+ L D+
Sbjct: 270 EVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSAT--SVASALRVCASLADLRMGTQ 327
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
+H + DL NS+++MYA+ G + +A ++FD + +D IS+ ++L+GY+QNG+
Sbjct: 328 LHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGK 387
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
A EA L+F +MQ + +P+ T + L+ AC++L + Q GR HG +I + ++ ++ N+
Sbjct: 388 AEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNS 447
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++DMYAKCG +D + +F+ + R++ SWN +IAGYG+HG G++A F M +G +
Sbjct: 448 LIDMYAKCGRIDLSRQVFDKM--PARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFE 505
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PD +TF +++ACSH+GL+ EG+ F MT K + P ++HY CMVD+L R G L EA+
Sbjct: 506 PDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQ 565
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
I+ MPL + VWGALL ACRIH G+ + + +L PE TG FVL+SNI++A+ +
Sbjct: 566 FIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGR 625
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
+ E ++R K KG KK S IE + F D+ +P ++Y +++++ ++IK
Sbjct: 626 FDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKK 685
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY D S L D+E+E++E L YHSEKLA+AFG+++L + + VTKNLRVC DCH+A
Sbjct: 686 LGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTA 745
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++++ + R IIVRDANRFHHF+ G CSC D+W
Sbjct: 746 IKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 234/478 (48%), Gaps = 27/478 (5%)
Query: 51 KYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNS 110
++ G+ AR +F+ I + ++ N +IRAY+ G ++LY +M + N
Sbjct: 42 QHIARGQLALARQVFDRIPAPDARAY--NALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
YTFPFVLKAC++ + + G+ +H G +D +V AL+D+Y +C + VF +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALI-LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
M +RD+V+W M+ Y A+ L + GL ++ T+VS+ + Q G + +
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219
Query: 230 AQAVHGYAICNAFL----EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+VH Y + A+L E + I +++ MYA+C ++ A VF M R+ ++W++++
Sbjct: 220 GTSVHAYCL-RAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIG 278
Query: 286 GYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
G++ + +EA LF +M C + + + C L ++G + H + S +
Sbjct: 279 GFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIH 338
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
D T N+++ MYAK G ++ A +F++I + ++ S+ L++GY +G +A F
Sbjct: 339 ADLTAGNSLLSMYAKAGLINEATMLFDEI--AIKDTISYGALLSGYVQNGKAEEAFLVFK 396
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
+M V+PD T S++ ACSH + GR + + E ++DM + G
Sbjct: 397 KMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCG 456
Query: 465 CLYEAFDMIKQM--PLPPNDSV-WGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSN 519
D+ +Q+ +P D V W ++ IHG L E T F+ M N
Sbjct: 457 ----RIDLSRQVFDKMPARDIVSWNTMIAGYGIHG---------LGKEATTLFLSMKN 501
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/628 (37%), Positives = 374/628 (59%), Gaps = 16/628 (2%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKA 119
AR +F+++ + + LWNT++ + + E +E ++ M G + ++ T VL A
Sbjct: 168 ARKVFDTVPSPDT--VLWNTLLAGLSGS----EAVESFARMVCDGSVRPDATTLASVLPA 221
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
A + + G+ VH + G +V L+ +Y+KCG + +FD M DLV++
Sbjct: 222 AAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAY 281
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
+I+ Y ++ LF + GL +S T+V++ G L AQ +HG+ +
Sbjct: 282 NALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLK 341
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
+ F + + +I ++ R ++E AR FD M ++ + SWN+M++GY QNG A+ L
Sbjct: 342 SGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVAL 401
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F++M + +PNP+T +SAC LG+ LG+ H I +++ + + A++DMYAK
Sbjct: 402 FEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAK 461
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG + A +FN + +NV SWN +IAGYG+HG G +AL+ + ML+ + P TF
Sbjct: 462 CGSISEARRIFNTM--DNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFL 519
Query: 420 SILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
S+L ACSH GL++EG K F MT ++ P ++H CMVD+LGRAG L EAF++I + P
Sbjct: 520 SVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPK 579
Query: 479 PP-NDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
VWGALL AC +H ++A+ LF+L+PE++GY+VL+SN++ + ++ E
Sbjct: 580 SAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAV 639
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R++ K++ L K +++IE G F DR +P + +Y +E + ++ AGY P+
Sbjct: 640 VRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPE 699
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
AL+DVE+E++EHM+ HSEKLA+AFG+++ P +++ KNLRVC DCH+A +FIS
Sbjct: 700 TEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISK 759
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +R I+VRDA+RFHHF G CSC DYW
Sbjct: 760 VTQRLIVVRDASRFHHFRDGVCSCGDYW 787
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D + +++ +Y V+ AR VFD + D + WN++L G SEA+ F M
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL----SGSEAVESFARMV 203
Query: 305 -NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ +P+ T ++ A + +GR H + + + ++ +Y+KCGD+
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
++A +F+ + + ++ ++N LI+GY ++G ++ F++++ G+ P+ T +++
Sbjct: 264 ESARCLFDMME--KPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIP 321
Query: 424 ACSHAG 429
S G
Sbjct: 322 VHSPFG 327
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/748 (34%), Positives = 412/748 (55%), Gaps = 71/748 (9%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G + F +LK+C L S R H + +G + A ++ Y+ G
Sbjct: 146 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNA-LVAMYSRCG 204
Query: 57 EPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTM------RRSGISSN 109
A +F+ I + WN+++ A+ + + L+L+S M + + S+
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD 169
+ +L AC S + + K VHG+ IR G D +V AL+D YAKCG ++ KVF+
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE------------------------ 205
M +D+VSW M+ Y Q+ E A LF+ ++E
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384
Query: 206 -----------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL----------E 244
G L + VTI+SV SA LG + +H Y++ N L E
Sbjct: 385 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 444
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFD--MMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
DL + N+++ MY++C + + AR +FD +E+R++++W M+ G+ Q G +++AL LF E
Sbjct: 445 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 504
Query: 303 M--QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT--LRNAVMDMYA 358
M + PN T ++ AC +L + ++G++ H Y++ + + + N ++DMY+
Sbjct: 505 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 564
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCGD+DTA ++F+ + S+++ SW ++ GYGMHG G +AL+ F +M + G PD ITF
Sbjct: 565 KCGDVDTARHVFDSM--SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 622
Query: 419 TSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+L ACSH G++D+G F M+ + P +HYAC +D+L R+G L +A+ +K MP
Sbjct: 623 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMP 682
Query: 478 LPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ P VW ALL ACR+H + A N L ++ E+ G + L+SNIYA + +W++V +
Sbjct: 683 MEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVAR 742
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R MK G+KK S ++ K F DR +P ++Y +ES+ IK GY+P+
Sbjct: 743 IRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPE 802
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
+ ALHDV++E++ ++L HSEKLA+A+G++ +P +++TKNLRVC DCHSAF +IS
Sbjct: 803 TNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISK 862
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I +I+VRD +RFHHF+ G+CSC YW
Sbjct: 863 IVDHEIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 261/563 (46%), Gaps = 80/563 (14%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQAL-------------------HLGAKIIIKY 52
+ LLK C ++ QIH + SGL++ LG ++ Y
Sbjct: 40 FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 99
Query: 53 TTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYT 112
G + A + + S + WN +IR + G + + M R+G + +T
Sbjct: 100 LACGATDYALLVLERV--TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFT 157
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
P VLKAC G HG I GF S+ ++ ALV MY++CG ++ +FDE++
Sbjct: 158 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 217
Query: 173 VR---DLVSWTVMITAYEQAEKPEEALILFQKT------QQEGLLSDSVTIVSVASAVGQ 223
R D++SW +++A+ ++ AL LF K + SD ++IV++ A G
Sbjct: 218 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 277
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
L V + + VHG AI N D+ + N+++ YA+CG +E A VF+MME +D++SWN+M
Sbjct: 278 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 337
Query: 284 LTGYIQNGQ-----------------------------------ASEALLLFDEMQNSDC 308
+ GY Q+G + EAL LF +M S
Sbjct: 338 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 397
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI----------DATLRNAVMDMYA 358
PN VT + ++SAC LG+ G + H Y + + + D + NA++DMY+
Sbjct: 398 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 457
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE--GVKPDHI 416
KC A ++F+DI ERNV +W V+I G+ +G AL+ F +M+ E GV P+
Sbjct: 458 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 517
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA--CMVDMLGRAGCLYEAFDMIK 474
T + IL AC+H I G++ A + + ++ C++DM + G + A +
Sbjct: 518 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 577
Query: 475 QMPLPPNDSVWGALLLACRIHGE 497
M S W +++ +HG
Sbjct: 578 SMSQKSAIS-WTSMMTGYGMHGR 599
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/748 (34%), Positives = 412/748 (55%), Gaps = 71/748 (9%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G + F +LK+C L S R H + +G + A ++ Y+ G
Sbjct: 153 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNA-LVAMYSRCG 211
Query: 57 EPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTM------RRSGISSN 109
A +F+ I + WN+++ A+ + + L+L+S M + + S+
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD 169
+ +L AC S + + K VHG+ IR G D +V AL+D YAKCG ++ KVF+
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE------------------------ 205
M +D+VSW M+ Y Q+ E A LF+ ++E
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391
Query: 206 -----------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL----------E 244
G L + VTI+SV SA LG + +H Y++ N L E
Sbjct: 392 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 451
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFD--MMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
DL + N+++ MY++C + + AR +FD +E+R++++W M+ G+ Q G +++AL LF E
Sbjct: 452 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 511
Query: 303 M--QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT--LRNAVMDMYA 358
M + PN T ++ AC +L + ++G++ H Y++ + + + N ++DMY+
Sbjct: 512 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 571
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCGD+DTA ++F+ + S+++ SW ++ GYGMHG G +AL+ F +M + G PD ITF
Sbjct: 572 KCGDVDTARHVFDSM--SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 629
Query: 419 TSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+L ACSH G++D+G F M+ + P +HYAC +D+L R+G L +A+ +K MP
Sbjct: 630 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMP 689
Query: 478 LPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ P VW ALL ACR+H + A N L ++ E+ G + L+SNIYA + +W++V +
Sbjct: 690 MEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVAR 749
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R MK G+KK S ++ K F DR +P ++Y +ES+ IK GY+P+
Sbjct: 750 IRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPE 809
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
+ ALHDV++E++ ++L HSEKLA+A+G++ +P +++TKNLRVC DCHSAF +IS
Sbjct: 810 TNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISK 869
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I +I+VRD +RFHHF+ G+CSC YW
Sbjct: 870 IVDHEIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 261/563 (46%), Gaps = 80/563 (14%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQAL-------------------HLGAKIIIKY 52
+ LLK C ++ QIH + SGL++ LG ++ Y
Sbjct: 47 FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 106
Query: 53 TTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYT 112
G + A + + S + WN +IR + G + + M R+G + +T
Sbjct: 107 LACGATDYALLVLERV--TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFT 164
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
P VLKAC G HG I GF S+ ++ ALV MY++CG ++ +FDE++
Sbjct: 165 LPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEIT 224
Query: 173 VR---DLVSWTVMITAYEQAEKPEEALILFQKT------QQEGLLSDSVTIVSVASAVGQ 223
R D++SW +++A+ ++ AL LF K + SD ++IV++ A G
Sbjct: 225 QRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGS 284
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
L V + + VHG AI N D+ + N+++ YA+CG +E A VF+MME +D++SWN+M
Sbjct: 285 LKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAM 344
Query: 284 LTGYIQNGQ-----------------------------------ASEALLLFDEMQNSDC 308
+ GY Q+G + EAL LF +M S
Sbjct: 345 VAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGS 404
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI----------DATLRNAVMDMYA 358
PN VT + ++SAC LG+ G + H Y + + + D + NA++DMY+
Sbjct: 405 LPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYS 464
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE--GVKPDHI 416
KC A ++F+DI ERNV +W V+I G+ +G AL+ F +M+ E GV P+
Sbjct: 465 KCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAY 524
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA--CMVDMLGRAGCLYEAFDMIK 474
T + IL AC+H I G++ A + + ++ C++DM + G + A +
Sbjct: 525 TISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFD 584
Query: 475 QMPLPPNDSVWGALLLACRIHGE 497
M S W +++ +HG
Sbjct: 585 SMSQKSAIS-WTSMMTGYGMHGR 606
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/730 (35%), Positives = 405/730 (55%), Gaps = 81/730 (11%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q H+ + SG N ++ AK+I Y+ Y N A + SI + YSF +++I A
Sbjct: 36 QAHARILKSGAQNDG-YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSF--SSLIYALT 92
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+++ ++S M G+ +S+ P + K CA S GK +H +G D++
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRD------------------------------- 175
VQ ++ MY +CG+ D KVFD MS +D
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 176 ----LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+VSW +++ + ++ +EA+++FQK G D VT+ SV +VG + +
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNV----------------------------- 262
+HGY I L+D C+ ++++ MY + G+V
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 263 --EKARLVFDMMEKR----DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+KA +F++ +++ +++SW S++ G QNG+ EAL LF EMQ + KPN VT
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC + + GR HG+ + ++ + + +A++DMYAKCG ++ ++ +FN + P+
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN-MMPT 451
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+N+ WN L+ G+ MHG ++ + F ++ +KPD I+FTS+LSAC GL DEG K
Sbjct: 452 -KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F M++ +KP ++HY+CMV++LGRAG L EA+D+IK+MP P+ VWGALL +CR+
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
EIAA LF LEPE+ G +VL+SNIYAA W EV +R M++ GLKK S
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
I+ + D+ +P ++ +K++ ++ E++ +G+ P+L ALHDVE++++E ML
Sbjct: 631 IQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLW 690
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSEKLAV FG++N +QV KNLR+C DCH+ +FIS R+I +RD NRFHHF+
Sbjct: 691 GHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFK 750
Query: 671 GGTCSCNDYW 680
G CSC D+W
Sbjct: 751 DGICSCGDFW 760
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/609 (40%), Positives = 365/609 (59%), Gaps = 9/609 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN++I A+NG + +EL+ M G +S T V+ AC + G VVHG +
Sbjct: 53 WNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSV 112
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
RTG +S++ + AL+DMY+ C K+F M +++VSWT MIT+Y +A ++
Sbjct: 113 RTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAG 172
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LFQ+ EG+ D I S A + ++VHGYAI N E L + N+++ MY
Sbjct: 173 LFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYV 232
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG +E+AR +FD + K+D ISWN+++ GY ++ A+EA LF+EM +PN VT
Sbjct: 233 KCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMAC 291
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ A L S + GR+ H Y + D + NA++DMY KCG L A +F+ + +
Sbjct: 292 ILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDML--TN 349
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
+N+ SW ++IAGYGMHG GR A+ F QM G++PD +F++IL ACSH+GL DEG +
Sbjct: 350 KNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRF 409
Query: 438 FADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH- 495
F M + ++P++KHYACMVD+L G L EA++ I+ MP+ P+ S+W +LL CRIH
Sbjct: 410 FNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHR 469
Query: 496 ----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
E A +F+LEPE+TGY+VL++NIYA + +W V KL+ + +GL++ S I
Sbjct: 470 NVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWI 529
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E F +R +P + + ++ +A ++ G+ P AL +D + L
Sbjct: 530 EVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCG 589
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HS KLAVAFG++NL+ ++VTKN RVC+ CH A +FIS + R+II+RD+NRFHHFE
Sbjct: 590 HSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEE 649
Query: 672 GTCSCNDYW 680
G CSC YW
Sbjct: 650 GRCSCRGYW 658
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 214/472 (45%), Gaps = 41/472 (8%)
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
++G VVHG +++ GF + V AL+ YAK + +D VFDEM RD++SW +I
Sbjct: 1 MDGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGC 60
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
++A+ LF + EG DS T++SV A Q VHGY++ + +
Sbjct: 61 ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N+++ MY+ C + +F ME+++++SW +M+T Y + G + LF EM
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+P+ + A S + G+ HGY I + ++ + NA+M+MY KCG ++ A
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F+ H ++++ SWN LI GY +A F++ML + ++P+ +T IL A +
Sbjct: 241 RFIFD--HVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAA 297
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
++ GR+ A + + +VDM + G
Sbjct: 298 SLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKC----------------------G 335
Query: 487 ALLLACRIHGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
ALLLA R+ + L + +M Y + R+ L E MK G++ A
Sbjct: 336 ALLLARRLFDMLTNKNLIS--------WTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDA 387
Query: 547 -AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY--MPDLSC 595
+FS I Y G + W+ +E K+ Y M DL C
Sbjct: 388 GSFSAILYACSHSGLR-----DEGWRFFNAMRNEHRIEPKLKHYACMVDLLC 434
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 16/268 (5%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ +H +G I + L + ++ Y G AR +F+ H K + WNT+I Y
Sbjct: 206 KSVHGYAIRNG-IEEVLPVANALMEMYVKCGYMEEARFIFD--HVTKKDTISWNTLIGGY 262
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ + E L++ M + N+ T +L A AS S + G+ +H +R G+L D+
Sbjct: 263 SRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDN 321
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V ALVDMY KCG ++FD ++ ++L+SWT+MI Y + +A+ LF++ +
Sbjct: 322 FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI------VAMYARC 259
G+ D+ + ++ A G L+ + G+ NA + I+ + V +
Sbjct: 382 GIQPDAGSFSAILYACSHSG--LRDE---GWRFFNAMRNEHRIEPKLKHYACMVDLLCHT 436
Query: 260 GNVEKARLVFDMME-KRDLISWNSMLTG 286
GN+++A + M + D W S+L G
Sbjct: 437 GNLKEAYEFIETMPIEPDSSIWVSLLRG 464
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 261/767 (34%), Positives = 409/767 (53%), Gaps = 108/767 (14%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTT---YGEPNTARSLFNSIHNDK 72
L+ C + QI S + SG + A ++K++T + N + +F+ I N
Sbjct: 33 LQKCQNIKQFNQILSQMILSGFFKDSF--AASRLLKFSTELPFININQSYQIFSHIENPN 90
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
F+ NTM++ Y + + +Y M S +++++YT+P + ++C+ +GK +
Sbjct: 91 G--FICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCI 148
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY------ 186
+++ GF SD Y+Q L++MYA CG D KVFD SV D+VSW M+ Y
Sbjct: 149 QDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNV 208
Query: 187 EQAE-------------------------KPEEALILFQKTQQE---------------- 205
E+A+ EEA LF + +Q+
Sbjct: 209 EEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNE 268
Query: 206 ---------------GLLSDSVTIVSVASAVGQLGDVLKAQAVHG--------------- 235
G++ D V ++SV SA +L V+ + VHG
Sbjct: 269 MYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQN 328
Query: 236 -----YAICNA-------FLEDLCIQ----NSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
Y+ C F E C+ NS+++ Y +CG +EKAR +FD M +D +S
Sbjct: 329 ALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVS 388
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
W++M++GY Q + +E L+LF EMQ KP+ + ++SACT+L + G+ H YI
Sbjct: 389 WSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIR 448
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ +KI+ L +++MY K G ++ A +F + E+ VS+WN LI G M+G K+
Sbjct: 449 KNGLKINIILGTTLINMYMKLGCVEDALEVFKGL--EEKGVSTWNALILGLAMNGLVDKS 506
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
L+ FS+M E GV P+ ITF ++L AC H GL+DEG + F M + + P +KHY CMVD
Sbjct: 507 LKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVD 566
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LGRAG L EA ++I+ MP+ P+ S WGALL AC+ + GE L +L P+H G+
Sbjct: 567 LLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGF 626
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
VL+SNIYA+ W +V ++R M+ G+ K S+IE + F D+ +P + +
Sbjct: 627 NVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHI 686
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
++ MA ++K+ GY PD D+++E++E L HSEKLA+AFG++ + P +++
Sbjct: 687 EHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRI 746
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+CNDCH+A + IS + R+I+VRD +RFHHF+ G+CSC DYW
Sbjct: 747 VKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/661 (36%), Positives = 372/661 (56%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ T G + GA + + Y + TA F + + LWN M+ AY
Sbjct: 369 QQLHAYTTKLGFASNNKIEGALLNL-YAKCADIETALDYF--LETEVENVVLWNVMLVAY 425
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ ++ M+ I N YT+P +LK C + G+ +H II+T F ++
Sbjct: 426 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 485
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
YV + L+DMYAK G+ D + + +D+VSWT MI Y Q ++AL F++
Sbjct: 486 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 545
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ SD V + + SA L + + Q +H A + F DL QN++V +Y+RCG +E++
Sbjct: 546 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 605
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
L F+ E D I+WN++++G+ Q+G EAL +F M N T V A +
Sbjct: 606 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 665
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H I + + + NA++ MYAKCG + AE F ++ S +N SWN
Sbjct: 666 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV--STKNEVSWNA 723
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKL 444
+I Y HG G +AL+ F QM+ V+P+H+T +LSACSH GL+D+G F M ++
Sbjct: 724 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 783
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+ P+ +HY C+VDML RAG L A + I++MP+ P+ VW LL AC +H GE A
Sbjct: 784 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 843
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A++L +LEPE + +VL+SN+YA S KW R+ MK KG+KK S IE I
Sbjct: 844 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 903
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F+ D+ +P E+++ + + GY+ D L++++ E ++ ++ HSEKLA++
Sbjct: 904 FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 963
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG+++L + V KNLRVCNDCH+ +F+S + R+IIVRDA RFHHFEGG CSC DY
Sbjct: 964 FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1023
Query: 680 W 680
W
Sbjct: 1024 W 1024
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 237/485 (48%), Gaps = 10/485 (2%)
Query: 9 EGFYDQLLKSCN----FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
EG + +L++C + QIH+ + GL + + + +I Y+ G + AR +
Sbjct: 146 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNGFVDLARRV 204
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + S W MI + N E + L+ M GI Y F VL AC
Sbjct: 205 FDGLRLKDHSS--WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 262
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ G+ +HG +++ GF SD+YV ALV +Y G +F MS RD V++ +I
Sbjct: 263 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 322
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Q E+A+ LF++ +GL DS T+ S+ A G + + Q +H Y F
Sbjct: 323 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 382
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ I+ +++ +YA+C ++E A F E +++ WN ML Y + +F +MQ
Sbjct: 383 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 442
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ PN T ++ C LG +LG + H II +N +++A + + ++DMYAK G LD
Sbjct: 443 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 502
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
TA ++ I + ++V SW +IAGY + KAL F QML+ G++ D + T+ +SA
Sbjct: 503 TAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 560
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
C+ + EG++ A ++ +V + R G + E++ +Q N +
Sbjct: 561 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA- 619
Query: 485 WGALL 489
W AL+
Sbjct: 620 WNALV 624
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 221/459 (48%), Gaps = 6/459 (1%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
LK+ L R++HS + GL + L K+ Y G+ A +F+ + +
Sbjct: 55 LKTNGSLDEGRKLHSQILKLGLDSNGC-LSEKLFDFYLFKGDLYGAFKVFDEM--PERTI 111
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE-GKVVHG 134
F WN MI+ A+ E L+ M ++ N TF VL+AC S+ + + +H
Sbjct: 112 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHA 171
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
I+ G + V L+D+Y++ G D +VFD + ++D SW MI+ + E E
Sbjct: 172 RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAE 231
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
A+ LF G++ SV SA ++ + + +HG + F D + N++V+
Sbjct: 232 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 291
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
+Y GN+ A +F M +RD +++N+++ G Q G +A+ LF M +P+ T
Sbjct: 292 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 351
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
LV AC+ G+ G++ H Y + + A++++YAKC D++TA + F +
Sbjct: 352 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF--LE 409
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
NV WNV++ YG+ R + F QM E + P+ T+ SIL C G ++ G
Sbjct: 410 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 469
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+ + + K + + + ++DM + G L A+D++
Sbjct: 470 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 508
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 195/396 (49%), Gaps = 9/396 (2%)
Query: 100 TMRRSGISSNSYTFPFVLKAC-ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC 158
++ GI N T ++L+ C +N + EG+ +H I++ G S+ + L D Y
Sbjct: 34 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 93
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
G KVFDEM R + +W MI E LF + E + + T V
Sbjct: 94 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 153
Query: 219 SAV--GQLG-DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
A G + DV+ + +H + + + N ++ +Y+R G V+ AR VFD + +
Sbjct: 154 EACRGGSVAFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 211
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
D SW +M++G +N +EA+ LF +M P P ++SAC + S ++G + H
Sbjct: 212 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 271
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
G ++ D + NA++ +Y G+L +AE++F+++ S+R+ ++N LI G G+
Sbjct: 272 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM--SQRDAVTYNTLINGLSQCGY 329
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
G KA+E F +M +G++PD T S++ ACS G + G++ A TKL K
Sbjct: 330 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 389
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
++++ + + A D + + N +W +L+A
Sbjct: 390 LLNLYAKCADIETALDYFLETEV-ENVVLWNVMLVA 424
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/675 (36%), Positives = 392/675 (58%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C + +L Q+HS +G+ + + L ++ Y+ + TA F + +
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGM-SADIILEGSLLDLYSKCADVETAHKFFLTTETE 426
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
LWN M+ AY + ++ E++ M+ G+ N +T+P +L+ C S + G+
Sbjct: 427 NI--VLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQ 484
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I+TGF + YV + L+DMYAK GQ ++ + D+VSWT MI Y Q +
Sbjct: 485 IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EAL LF++ + G+ D++ S SA + + + Q +H + F DL I N+
Sbjct: 545 FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNA 604
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++++YARCG +++A L F+ + ++ ISWNS+++G Q+G EAL +F M ++ + N
Sbjct: 605 LISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVN 664
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T +SA L + + G++ H ++ + + + N+++ +YAK G + A FN
Sbjct: 665 MFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFN 724
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
D+ SERNV SWN +I GY HG G +AL F +M G+ P+H+TF +LSACSH GL+
Sbjct: 725 DM--SERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLV 782
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
EG F M K+ + P+ +HY C+VD+LGRAG L A + IK+MP+P + +W LL
Sbjct: 783 KEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 842
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC IH GE AA++L +LEPE + +VL+SNIYA S +W R+ MK++G+KK
Sbjct: 843 ACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKE 902
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F+ D+++P ++Y+ + + GY+ D L++ E +
Sbjct: 903 PGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQK 962
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ + + HSEKLA+AFG+++L ++V KNLRVCNDCH+ +++S I R IIVRDA+R
Sbjct: 963 DPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHR 1022
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+GG CSC D+W
Sbjct: 1023 FHHFDGGVCSCKDFW 1037
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 237/483 (49%), Gaps = 12/483 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL+ C SL ++H ++ SG + L L ++ Y +G+ + A +F+
Sbjct: 61 YLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPL-LIDSLVDNYFRHGDQHGAVKVFDEN 119
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
N +S WN MI + + L+ M GI+ N YTF VLKAC +
Sbjct: 120 SNRSVFS--WNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFN 177
Query: 129 -GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
K VH GF S V L+D+Y+K G + KVF+ + ++D+V+W MI+
Sbjct: 178 YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLS 237
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q EEA++LF + + SV SA ++ + +H I F +
Sbjct: 238 QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N +VA+Y+R + A +F M RD +S+NS+++G +Q G + AL LF +MQ
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC 357
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
KP+ +T L+SAC +G+ G + H + I + M D L +++D+Y+KC D++TA
Sbjct: 358 LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
F + N+ WNV++ YG + + E F QM EG+ P+ T+ SIL C+
Sbjct: 418 KFF--LTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WG 486
G + G + + K + V + ++DM + G L A ++++ LP +D V W
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR--LPEDDVVSWT 533
Query: 487 ALL 489
A++
Sbjct: 534 AMI 536
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 230/465 (49%), Gaps = 6/465 (1%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
++Q+HS G + L + +I Y+ G +A+ +FN I + W MI
Sbjct: 179 VKQVHSRTFYYGFDSSPL-VANLLIDLYSKNGYIESAKKVFNCICMKDIVT--WVAMISG 235
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ NG E + L+ M S I Y VL A L G+ +H +I+ GF S+
Sbjct: 236 LSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+YV LV +Y++ + ++F M+ RD VS+ +I+ Q + AL LF K Q+
Sbjct: 296 TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQR 355
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+ L D +T+ S+ SA +G + K +H +AI D+ ++ S++ +Y++C +VE
Sbjct: 356 DCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVET 415
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A F E +++ WN ML Y Q S++ +F +MQ PN T ++ CT
Sbjct: 416 AHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
LG+ LG + H ++I + +++ + + ++DMYAK G L A + + E +V SW
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRL--PEDDVVSWT 533
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
+IAGY H +AL+ F +M G++ D+I F S +SAC+ + +G++ A
Sbjct: 534 AMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAA 593
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++ ++ + R G + EA+ +++ N+ W +L+
Sbjct: 594 GFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLV 637
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 232/466 (49%), Gaps = 12/466 (2%)
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
+A +F+++++ S+ N++I G LEL++ M+R + + T +L A
Sbjct: 314 SAERIFSTMNSRDGVSY--NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
CAS + +G +H I+ G +D ++ +L+D+Y+KC + K F ++V W
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLW 431
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
VM+ AY Q + ++ +F++ Q EG++ + T S+ LG + + +H + I
Sbjct: 432 NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
F ++ + + ++ MYA+ G + A + + + D++SW +M+ GY+Q+ SEAL L
Sbjct: 492 TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQL 551
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F+EM+ + + + +SAC + + + G++ H + D ++ NA++ +YA+
Sbjct: 552 FEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYAR 611
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG + A F I ++N SWN L++G G+ +AL+ F +ML + + T+
Sbjct: 612 CGRIQEAYLAFEKI--GDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYG 669
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
S +SA + I +G++ + + K E + ++ + ++G + +A+ M
Sbjct: 670 SAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-E 728
Query: 480 PNDSVWGALLLACRIHG-EIAANYLFQ------LEPEHTGYFVLMS 518
N W A++ HG + A LF+ + P H + ++S
Sbjct: 729 RNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 200/400 (50%), Gaps = 8/400 (2%)
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
++L + M G+ SN + ++L+ C ++ + E +H I ++GF + + +LVD
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
Y + G KVFDE S R + SW MI + + + LF++ EG+ + T
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 215 VSVASA-VGQLGDVL--KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
V A VG GD+ + VH F + N ++ +Y++ G +E A+ VF+
Sbjct: 163 AGVLKACVG--GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ +D+++W +M++G QNG EA+LLF +M S+ P P ++SA T + +LG
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ H +I + + N ++ +Y++ L +AE +F+ ++ R+ S+N LI+G
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNS--RDGVSYNSLISGLV 338
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
G +ALE F++M + +KPD IT S+LSAC+ G + +G + + K + ++
Sbjct: 339 QQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII 398
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
++D+ + + A N +W +L+A
Sbjct: 399 LEGSLLDLYSKCADVETAHKFFLTTE-TENIVLWNVMLVA 437
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/673 (36%), Positives = 384/673 (57%), Gaps = 11/673 (1%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
+LL S + R +H + G + +G +I Y+ G + AR +F+ I +
Sbjct: 54 KLLVSMEWAELGRIVHGCVLKVGYGSNTF-IGTALIDAYSVSGCVSMAREVFDEISSKDM 112
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
S W MI +YA N E LE +S MR +G N++TF VLKAC GK VH
Sbjct: 113 VS--WTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVH 170
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
+++T + D YV L+++Y +CG DD + F +M D++ W+ MI+ + Q+ + E
Sbjct: 171 CSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSE 230
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+AL +F + ++ ++ + T SV A + + ++ +HG+A+ D+ + N+++
Sbjct: 231 KALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALM 290
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
A YA+CG +E++ +F+ + R+ +SWN+++ Y+Q G AL LF M + V
Sbjct: 291 ACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEV 350
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T ++ AC L + +LG + H + D + NA++DMYAKCG + A MF+ +
Sbjct: 351 TYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDML 410
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
R+ SWN +I GY MHG G +A++ F+ M E KPD +TF +LSACS+ G +DE
Sbjct: 411 --DLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDE 468
Query: 434 GRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
G++ F M + ++P ++HY CMV ++GR+G L +A I+ +P P+ +W ALL AC
Sbjct: 469 GKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGAC 528
Query: 493 RIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
IH G I+A + +LEP VL+SNIYA + +W V +R+ MK KG+KK
Sbjct: 529 VIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPG 588
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S IE ++ F AD + K + +E + ++ + AGY P L+ L DVED+++E
Sbjct: 589 LSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKER 648
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
+L HSE+LA+AFG++ + +++ KNLR+C DCHS + IS I R IIVRD NRFH
Sbjct: 649 LLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFH 708
Query: 668 HFEGGTCSCNDYW 680
HFE G+CSC DYW
Sbjct: 709 HFENGSCSCADYW 721
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 227/447 (50%), Gaps = 6/447 (1%)
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+ + + SF+ T+I YA + +E EL++ + G N + F VLK S
Sbjct: 2 VFDEMPERNTVSFV--TLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSM 59
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
G++VHG +++ G+ S++++ AL+D Y+ G +VFDE+S +D+VSWT MI
Sbjct: 60 EWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMI 119
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
+Y + + EAL F + + G ++ T V A L + + VH + +
Sbjct: 120 ASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
DL + ++ +Y RCG+ + A F M K D+I W+ M++ + Q+GQ+ +AL +F +M
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ + PN T ++ A + S L + HG+ + + + D + NA+M YAKCG +
Sbjct: 240 RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCI 299
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ + +F + S+RN SWN +I Y G G +AL FS ML V+ +T++SIL
Sbjct: 300 EQSMELFEAL--SDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILR 357
Query: 424 ACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
AC+ ++ G + K +V ++DM + G + +A M + L S
Sbjct: 358 ACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS 417
Query: 484 VWGALLLACRIHG-EIAANYLFQLEPE 509
W A++ +HG + A +F L E
Sbjct: 418 -WNAIICGYSMHGLGVEAIKMFNLMKE 443
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 2/211 (0%)
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
+VFD M +R+ +S+ +++ GY Q+ + EA LF + + NP ++ +
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+LGR HG ++ + + A++D Y+ G + A +F++I S +++ SW +
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEI--SSKDMVSWTGM 118
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
IA Y + +ALEFFSQM G KP++ TF +L AC D G+ + K +
Sbjct: 119 IASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY 178
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ ++ ++++ R G +A+ MP
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMP 209
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/661 (36%), Positives = 372/661 (56%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ T G + GA + + Y + TA F + + LWN M+ AY
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNL-YAKCADIETALDYF--LETEVENVVLWNVMLVAY 465
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ ++ M+ I N YT+P +LK C + G+ +H II+T F ++
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
YV + L+DMYAK G+ D + + +D+VSWT MI Y Q ++AL F++
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ SD V + + SA L + + Q +H A + F DL QN++V +Y+RCG +E++
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
L F+ E D I+WN++++G+ Q+G EAL +F M N T V A +
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H I + + + NA++ MYAKCG + AE F ++ S +N SWN
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV--STKNEVSWNA 763
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKL 444
+I Y HG G +AL+ F QM+ V+P+H+T +LSACSH GL+D+G F M ++
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+ P+ +HY C+VDML RAG L A + I++MP+ P+ VW LL AC +H GE A
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A++L +LEPE + +VL+SN+YA S KW R+ MK KG+KK S IE I
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F+ D+ +P E+++ + + GY+ D L++++ E ++ ++ HSEKLA++
Sbjct: 944 FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 1003
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG+++L + V KNLRVCNDCH+ +F+S + R+IIVRDA RFHHFEGG CSC DY
Sbjct: 1004 FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
Query: 680 W 680
W
Sbjct: 1064 W 1064
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 237/485 (48%), Gaps = 10/485 (2%)
Query: 9 EGFYDQLLKSCN----FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
EG + +L++C + QIH+ + GL + + + +I Y+ G + AR +
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNGFVDLARRV 244
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + S W MI + N E + L+ M GI Y F VL AC
Sbjct: 245 FDGLRLKDHSS--WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ G+ +HG +++ GF SD+YV ALV +Y G +F MS RD V++ +I
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Q E+A+ LF++ +GL DS T+ S+ A G + + Q +H Y F
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ I+ +++ +YA+C ++E A F E +++ WN ML Y + +F +MQ
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ PN T ++ C LG +LG + H II +N +++A + + ++DMYAK G LD
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
TA ++ I + ++V SW +IAGY + KAL F QML+ G++ D + T+ +SA
Sbjct: 543 TAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
C+ + EG++ A ++ +V + R G + E++ +Q N +
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA- 659
Query: 485 WGALL 489
W AL+
Sbjct: 660 WNALV 664
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 209/435 (48%), Gaps = 13/435 (2%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
R++F ++ + SF I Y + + + S R GI N T ++L+ C
Sbjct: 39 TRTVFPTLCGTRRASF---AAISVYISEDESFQEKRIDSVENR-GIRPNHQTLKWLLEGC 94
Query: 121 -ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
+N + EG+ +H I++ G S+ + L D Y G KVFDEM R + +W
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTW 154
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV--GQLG-DVLKAQAVHGY 236
MI E LF + E + + T V A G + DV+ + +H
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--EQIHAR 212
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ + + N ++ +Y+R G V+ AR VFD + +D SW +M++G +N +EA
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
+ LF +M P P ++SAC + S ++G + HG ++ D + NA++ +
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y G+L +AE++F+++ S+R+ ++N LI G G+G KA+E F +M +G++PD
Sbjct: 333 YFHLGNLISAEHIFSNM--SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
T S++ ACS G + G++ A TKL K ++++ + + A D +
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 477 PLPPNDSVWGALLLA 491
+ N +W +L+A
Sbjct: 451 EV-ENVVLWNVMLVA 464
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/688 (36%), Positives = 389/688 (56%), Gaps = 19/688 (2%)
Query: 5 GPSTEGFYDQLLKSCNF---LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTA 61
GP F LLK C LA+ R +H+ L GL ++++ A + Y P A
Sbjct: 13 GPVLRTF-TALLKLCAARADLATGRAVHAQLEARGLASESIASTA-LANMYFKCRRPADA 70
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR--RSGISSNSYTFPFVLKA 119
R +F+ + + + WN ++ YA NG +E M+ G +S T VL A
Sbjct: 71 RRVFDRMPSRDRVA--WNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPA 128
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
CA + + VH +R G V A++D Y KCG + VFD M VR+ VSW
Sbjct: 129 CADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSW 188
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
MI Y EA+ LF + QEG+ ++++ A G+LG + + + VH +
Sbjct: 189 NAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVR 248
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALL 298
++ + N+++ YA+C + A VF+ + K+ ISWN+M+ G+ QN +A
Sbjct: 249 VGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAER 308
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
LF MQ + +P+ T + ++ A + R HGY I + D + A++DMY+
Sbjct: 309 LFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYS 368
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG + A +F+ +R+V +WN +I GYG HG G+ A+E F +M G P+ TF
Sbjct: 369 KCGRVSIARRLFDSAR--DRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTF 426
Query: 419 TSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
S+L+ACSHAGL+DEG+K FA M K ++P ++HY MVD+LGRAG L EA+ IK MP
Sbjct: 427 LSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMP 486
Query: 478 LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ P SV+GA+L AC++H E +A +F+L PE Y VL++NIYA ++ W++V +
Sbjct: 487 IEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVAR 546
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R M+ KGL+K +S+I+ ++ F++ + + K++Y ++ + EIK GY+PD
Sbjct: 547 VRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPD 606
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
++HDVED+ + +LN HSEKLA+A+G++ P +Q+ KNLRVCNDCH+A + IS
Sbjct: 607 TD-SIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISL 665
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ R+II+RD RFHHF+ G CSC DYW
Sbjct: 666 LTGREIIMRDIQRFHHFKDGKCSCGDYW 693
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/573 (40%), Positives = 353/573 (61%), Gaps = 10/573 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
VL C S + I EG+ VH +I+T + Y++ L+ +Y KC D +V DEM R+
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWT MI+ Y Q EAL LF + G + T +V ++ + +H
Sbjct: 76 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
I +F + + +S++ MYA+ G + +AR VFD + +RD++S ++++GY Q G E
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL LF +Q + N VT +++A + L + GR+ H +++ + + L+N+++D
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 255
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPD 414
MY+KCG L + +F+ + ER V SWN ++ GY HG GR+A+E F M EE VKPD
Sbjct: 256 MYSKCGSLTYSRRIFDSM--PERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 313
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
+TF ++LS CSH G+ D G + F +M K +PE++HY C+VD+ GRAG + EAF+
Sbjct: 314 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 373
Query: 473 IKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKW 527
IK+MP P ++WG+LL ACR+H GE A L ++E E+ G +V++SN+YA++ +W
Sbjct: 374 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 433
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+V +RE MK K + K S IE + + FH +DR +P +EV+ KV ++++IK A
Sbjct: 434 DDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEA 493
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
GY+P+LSC L+DV+DE +E +L HSEKLA+AFG++ V++ KNLR+C DCH+
Sbjct: 494 GYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFA 553
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+F+S +Y R++ +RD NRFHH GGTCSC DYW
Sbjct: 554 KFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 207/388 (53%), Gaps = 10/388 (2%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD +L C ++R+ +H+ + + ++L ++I+ Y AR + + +
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCRCLGDARRVLDEM 71
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W MI Y+ G+ E L L+ M SG + N +TF VL +C S+S
Sbjct: 72 PERNVVS--WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQL 129
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H +I+T F S +V ++L+DMYAK G+ + +VFD + RD+VS T +I+ Y Q
Sbjct: 130 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 189
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL LF++ Q+EG+ S+ VT SV +A+ L + + VH + + + +
Sbjct: 190 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVL 249
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
QNS++ MY++CG++ +R +FD M +R +ISWN+ML GY ++G EA+ LF M+ +
Sbjct: 250 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 309
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDT 365
KP+ VT L ++S C++ G G + ++N + + + V+D++ + G ++
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMH 393
A + P E + W L+ +H
Sbjct: 370 AFEFIKKM-PFEPTAAIWGSLLGACRVH 396
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/665 (36%), Positives = 380/665 (57%), Gaps = 14/665 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
+A+L ++H+ L S N L A Y G + A S + + +S WN +
Sbjct: 28 VAALTRLHALLVVSSSQNLFPSLAAA----YARVGALDAAESTLAASPSSRSCIPAWNAL 83
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
+ A + G L ++ + S +S TF L ACA + + V G+
Sbjct: 84 LAARSRAGSPGAALRVFRALPSSA-RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGY 142
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D +V +AL+ +Y++CG D +VFD M +D V+W+ M+ + A +P EAL ++ +
Sbjct: 143 GRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSR 202
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
++ G+ D V +V V A G+ +VHG + + D+ I S+V MYA+ G+
Sbjct: 203 MREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGH 262
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+ AR VF MM R+ +SWN++++G+ QNG A EAL LF EM S +P+ + + A
Sbjct: 263 FDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLA 322
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C +G +LG+ HG+I+ ++ L AV+DMY+KCG L++A +FN + S R++
Sbjct: 323 CADVGFLKLGKSIHGFILR-RLEFQCILGTAVLDMYSKCGSLESARKLFNKL--SSRDLV 379
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
WN +IA G HG G AL F ++ E G+KPDH TF S+LSA SH+GL++EG+ F M
Sbjct: 380 LWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRM 439
Query: 442 -TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
T+ ++P KH C+VD+L R+G + EA +M+ M P +W ALL C +
Sbjct: 440 ITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLEL 499
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
GE A + + +PE G L+SN+YAA+ KW +V ++R+ MK+ G KK +S+IE
Sbjct: 500 GETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHG 559
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
F D+ +P +E+ K + ++ E++ GY+P HD++++ +E +L+YHSE+
Sbjct: 560 TRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSER 619
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AFG++N +P + + KNLRVC DCH A ++IS I R+I+VRDA RFHHF+ G CS
Sbjct: 620 LAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACS 679
Query: 676 CNDYW 680
C DYW
Sbjct: 680 CGDYW 684
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/573 (40%), Positives = 353/573 (61%), Gaps = 10/573 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
VL C S + I EG+ VH +I+T + Y++ L+ +Y KC D +V DEM R+
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWT MI+ Y Q EAL LF + G + T +V ++ + +H
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
I +F + + +S++ MYA+ G + +AR VFD + +RD++S ++++GY Q G E
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL LF +Q + N VT +++A + L + GR+ H +++ + + L+N+++D
Sbjct: 663 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 722
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPD 414
MY+KCG L + +F+ + ER V SWN ++ GY HG GR+A+E F M EE VKPD
Sbjct: 723 MYSKCGSLTYSRRIFDSM--PERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 780
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
+TF ++LS CSH G+ D G + F +M K +PE++HY C+VD+ GRAG + EAF+
Sbjct: 781 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 840
Query: 473 IKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKW 527
IK+MP P ++WG+LL ACR+H GE A L ++E E+ G +V++SN+YA++ +W
Sbjct: 841 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 900
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+V +RE MK K + K S IE + + FH +DR +P +EV+ KV ++++IK A
Sbjct: 901 DDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEA 960
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
GY+P+LSC L+DV+DE +E +L HSEKLA+AFG++ V++ KNLR+C DCH+
Sbjct: 961 GYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFA 1020
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+F+S +Y R++ +RD NRFHH GGTCSC DYW
Sbjct: 1021 KFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 207/388 (53%), Gaps = 10/388 (2%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD +L C ++R+ +H+ + + ++L ++I+ Y AR + + +
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCRCLGDARRVLDEM 538
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W MI Y+ G+ E L L+ M SG + N +TF VL +C S+S
Sbjct: 539 PERNVVS--WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQL 596
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H +I+T F S +V ++L+DMYAK G+ + +VFD + RD+VS T +I+ Y Q
Sbjct: 597 GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ 656
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL LF++ Q+EG+ S+ VT SV +A+ L + + VH + + + +
Sbjct: 657 LGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVL 716
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
QNS++ MY++CG++ +R +FD M +R +ISWN+ML GY ++G EA+ LF M+ +
Sbjct: 717 QNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 776
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDT 365
KP+ VT L ++S C++ G G + ++N + + + V+D++ + G ++
Sbjct: 777 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 836
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMH 393
A + P E + W L+ +H
Sbjct: 837 AFEFIKKM-PFEPTAAIWGSLLGACRVH 863
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/618 (39%), Positives = 372/618 (60%), Gaps = 22/618 (3%)
Query: 81 MIRAYANNGHCVETLELYSTMRRS--------GISSNSYTFPFVLKACASNSLILEGKVV 132
++ + +N H V + ++ T R G+ +N + VL C I EG+ V
Sbjct: 21 LLSTFPSNSHHVLNIHIHDTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRV 80
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H +I+T +L Y++ L+ Y KC D VFD M R++VSWT MI+AY Q
Sbjct: 81 HAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYA 140
Query: 193 EEALILFQKTQQEGLLSDSVTIVSV-ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+AL LF + + G + T +V S +G G VL Q +H + I + + + +S
Sbjct: 141 SQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQ-IHSHIIKLNYEAHVYVGSS 199
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MYA+ G + +AR +F + +RD++S ++++GY Q G EAL LF +Q + N
Sbjct: 200 LLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSN 259
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT +++A + L + G++ H +++ S + L+N+++DMY+KCG+L A +F+
Sbjct: 260 YVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFD 319
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGL 430
+H ER V SWN ++ GY HG GR+ LE F+ M++E VKPD +T ++LS CSH GL
Sbjct: 320 TLH--ERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGL 377
Query: 431 IDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
D+G F DMT K+SV+P+ KHY C+VDMLGRAG + AF+ +K+MP P+ ++WG L
Sbjct: 378 EDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCL 437
Query: 489 LLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L AC +H GE + L Q+EPE+ G +V++SN+YA++ +W +V LR M K +
Sbjct: 438 LGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVT 497
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K S IE + + FH +D +P +EV KV+ ++ K AGY+PDLSC LHDV++E
Sbjct: 498 KEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEE 557
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+E +L HSEKLA+ FG++ TPE+V ++V KNLR+C DCH+ ++ S IY R++ +RD
Sbjct: 558 QKEKILLSHSEKLALTFGLIA-TPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRD 616
Query: 663 ANRFHHFEGGTCSCNDYW 680
NRFH GG CSC DYW
Sbjct: 617 KNRFHRIVGGKCSCGDYW 634
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 208/388 (53%), Gaps = 10/388 (2%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y+ +L C ++R+ +H+ + + + ++L ++I+ Y AR +F+ +
Sbjct: 61 YNTVLNECLRKRAIREGQRVHAHMIKTHYL-PCVYLRTRLIVFYVKCDSLRDARHVFDVM 119
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W MI AY+ G+ + L L+ M RSG N +TF VL +C +S +
Sbjct: 120 PERNVVS--WTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVL 177
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H II+ + + YV ++L+DMYAK G+ + +F + RD+VS T +I+ Y Q
Sbjct: 178 GRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQ 237
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL LF++ Q+EG+ S+ VT SV +A+ L + + VH + + + + +
Sbjct: 238 LGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVL 297
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
QNS++ MY++CGN+ AR +FD + +R +ISWN+ML GY ++G+ E L LF+ M + +
Sbjct: 298 QNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENK 357
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI--DATLRNAVMDMYAKCGDLDT 365
KP+ VT L ++S C++ G G + + + + D+ V+DM + G ++
Sbjct: 358 VKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEA 417
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMH 393
A + P E + + W L+ +H
Sbjct: 418 AFEFVKKM-PFEPSAAIWGCLLGACSVH 444
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/665 (36%), Positives = 372/665 (55%), Gaps = 11/665 (1%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L S +Q+H+ T G + GA + + Y + TA + F + + LWN M
Sbjct: 388 LFSGQQLHAYTTKLGFASNDKIEGALLNL-YAKCSDIETALNYF--LETEVENVVLWNVM 444
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
+ AY + ++ M+ I N YT+P +LK C + G+ +H II+T F
Sbjct: 445 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSF 504
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
++YV + L+DMYAK G+ D + + +D+VSWT MI Y Q ++AL F++
Sbjct: 505 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 564
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
G+ SD V + + SA L + + Q +H A + F DL QN++V +Y++CGN
Sbjct: 565 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGN 624
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+E+A L F+ E D I+WN++++G+ Q+G EAL +F M N T V A
Sbjct: 625 IEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKA 684
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
+ + + G++ H I + + + NA++ MYAKCG + A+ F ++ S +N
Sbjct: 685 ASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLEL--SMKNEV 742
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SWN +I Y HG G +AL+ F QM+ V+P+H+T +LSACSH GL+D+G + F M
Sbjct: 743 SWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESM 802
Query: 442 -TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
T+ + P+ +HY C+VDML RAG L A D I +MP+ P+ VW LL AC +H
Sbjct: 803 NTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEI 862
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
GE AA++L +LEPE + +VL+SN+YA KW R+ MK KG+KK S IE
Sbjct: 863 GEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 922
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
I F+ D+ +P E+++ + + GY+ D L +++ E ++ + HSEK
Sbjct: 923 SIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEK 982
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA++FG+++L + V KNLRVCNDCH +F+S + R+IIVRDA RFHHFEGG CS
Sbjct: 983 LAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACS 1042
Query: 676 CNDYW 680
C DYW
Sbjct: 1043 CKDYW 1047
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 239/485 (49%), Gaps = 10/485 (2%)
Query: 9 EGFYDQLLKSCN----FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
EG + +L++C + QIH+ + GL ++ + +I Y+ G + AR +
Sbjct: 169 EGTFSGVLEACRGGSVAFDVVEQIHARIIYQGL-GKSTIVCNPLIDLYSRNGFVDRARRV 227
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ ++ S W MI + N VE + L+ M GI Y F VL AC
Sbjct: 228 FDGLYLKDHSS--WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 285
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ G+ +HG +++ GF SD+YV ALV +Y G +F MS RD V++ +I
Sbjct: 286 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLIN 345
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Q E+A+ LF++ Q +GL DS T+ S+ A G + Q +H Y F
Sbjct: 346 GLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFAS 405
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ I+ +++ +YA+C ++E A F E +++ WN ML Y + +F +MQ
Sbjct: 406 NDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 465
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ PN T ++ C LG +LG + H II ++ +++A + + ++DMYAK G LD
Sbjct: 466 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLD 525
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
TA ++ I + ++V SW +IAGY + KAL F QML+ G++ D + T+ +SA
Sbjct: 526 TAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 583
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
C+ + EG++ A ++ +V + + G + EA+ +Q N +
Sbjct: 584 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIA- 642
Query: 485 WGALL 489
W AL+
Sbjct: 643 WNALV 647
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 224/459 (48%), Gaps = 6/459 (1%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
LK+ L R++HS + G N A L K++ Y G+ + A +F+ + +
Sbjct: 78 LKTNGSLDEGRKLHSQILKLGFDNNAC-LSEKLLDFYLFKGDLDGALKVFDEM--PERTI 134
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE-GKVVHG 134
F WN MI+ A+ + L+ M ++ N TF VL+AC S+ + + +H
Sbjct: 135 FTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHA 194
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
II G + V L+D+Y++ G D +VFD + ++D SW MI+ + E E
Sbjct: 195 RIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVE 254
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
A+ LF G++ SV SA ++ + + +HG + F D + N++V+
Sbjct: 255 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 314
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
+Y G++ A +F M +RD +++N+++ G Q G +A+ LF MQ +P+ T
Sbjct: 315 LYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNT 374
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
LV AC+ G+ G++ H Y + + A++++YAKC D++TA N F +
Sbjct: 375 LASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYF--LE 432
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
NV WNV++ YG+ R + F QM E + P+ T+ SIL C G ++ G
Sbjct: 433 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 492
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+ + + K S + + ++DM + G L A+D++
Sbjct: 493 EQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDIL 531
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 198/396 (50%), Gaps = 9/396 (2%)
Query: 100 TMRRSGISSNSYTFPFVLKAC-ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC 158
++ GI N T ++L+ C +N + EG+ +H I++ GF +++ + L+D Y
Sbjct: 57 SVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFK 116
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
G D KVFDEM R + +W MI + LF + E + + T V
Sbjct: 117 GDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVL 176
Query: 219 SAV--GQLG-DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
A G + DV+ + +H I + + N ++ +Y+R G V++AR VFD + +
Sbjct: 177 EACRGGSVAFDVV--EQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK 234
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
D SW +M++G +N EA+ LF +M P P ++SAC + S ++G + H
Sbjct: 235 DHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 294
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
G ++ D + NA++ +Y G L +AE++F+++ S+R+ ++N LI G G+
Sbjct: 295 GLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNM--SQRDAVTYNTLINGLSQCGY 352
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
G KA+E F +M +G++PD T S++ ACS G + G++ A TKL K
Sbjct: 353 GEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGA 412
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
++++ + + A + + + N +W +L+A
Sbjct: 413 LLNLYAKCSDIETALNYFLETEV-ENVVLWNVMLVA 447
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/675 (36%), Positives = 391/675 (57%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C + +L Q+HS +G+ + + L ++ Y+ + TA F + +
Sbjct: 368 LLSACASVGALHKGMQLHSHAIKAGM-SADIILEGSLLDLYSKCADVETAHKFF--LXTE 424
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
LWN M+ AY + ++ E++ M+ G+ N +T+P +L+ C S + G+
Sbjct: 425 TENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQ 484
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I+TGF + YV + L+DMYAK GQ ++ + D+VSWT MI Y Q +
Sbjct: 485 IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EAL LF++ + G+ D++ S SA + + + Q +H + F DL I N+
Sbjct: 545 FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNA 604
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++++YARCG +++A L F+ + ++ ISWNS+++G Q+G EAL +F M ++ + N
Sbjct: 605 LISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVN 664
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T +SA L + + G++ H ++ + + + N+++ +YAK G + A FN
Sbjct: 665 MFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFN 724
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
D+ SERNV SWN +I GY HG G +AL F +M G+ P+H+TF +LSACSH GL+
Sbjct: 725 DM--SERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLV 782
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
EG F M K+ + P+ +HY C+VD+LGRAG L A + IK+MP+P + +W LL
Sbjct: 783 KEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 842
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC IH GE AA++L +LEPE + +VL+SNIYA S +W R+ MK+ G+KK
Sbjct: 843 ACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKE 902
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F+ D+++P ++Y+ + + GY+ D L++ E +
Sbjct: 903 PGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQK 962
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ + + HSEKLA+AFG+++L ++V KNLRVCNDCH+ +++S I R IIVRDA+R
Sbjct: 963 DPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHR 1022
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+GG CSC D+W
Sbjct: 1023 FHHFDGGVCSCKDFW 1037
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 237/483 (49%), Gaps = 12/483 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL+ C SL ++H ++ SG + L L ++ Y +G+ + A +F+
Sbjct: 61 YLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPL-LIDSLVDNYFRHGDQHGAVKVFDEN 119
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
N +S WN MI + + L+ M GI+ N YTF VLKAC +
Sbjct: 120 SNRSVFS--WNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFN 177
Query: 129 -GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
K VH GF S V L+D+Y+K G + KVF+ + ++D+V+W MI+
Sbjct: 178 YVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLS 237
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q EEA++LF + + SV SA ++ + +H I F +
Sbjct: 238 QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N +VA+Y+R + A +F M RD +S+NS+++G +Q G + AL LF +MQ
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC 357
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
KP+ +T L+SAC +G+ G + H + I + M D L +++D+Y+KC D++TA
Sbjct: 358 LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
F + N+ WNV++ YG + + E F QM EG+ P+ T+ SIL C+
Sbjct: 418 KFF--LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WG 486
G + G + + K + V + ++DM + G L A ++++ LP +D V W
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR--LPEDDVVSWT 533
Query: 487 ALL 489
A++
Sbjct: 534 AMI 536
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 230/465 (49%), Gaps = 6/465 (1%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
++Q+HS G + L + +I Y+ G +A+ +FN I + W MI
Sbjct: 179 VKQVHSRTFYYGFDSSPL-VANLLIDLYSKNGYIESAKKVFNCICMKDIVT--WVAMISG 235
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ NG E + L+ M S I Y VL A L G+ +H +I+ GF S+
Sbjct: 236 LSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE 295
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+YV LV +Y++ + ++F M+ RD VS+ +I+ Q + AL LF K Q+
Sbjct: 296 TYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQR 355
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+ L D +T+ S+ SA +G + K +H +AI D+ ++ S++ +Y++C +VE
Sbjct: 356 DCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVET 415
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A F E +++ WN ML Y Q S++ +F +MQ PN T ++ CT
Sbjct: 416 AHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
LG+ LG + H ++I + +++ + + ++DMYAK G L A + + E +V SW
Sbjct: 476 LGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRL--PEDDVVSWT 533
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
+IAGY H +AL+ F +M G++ D+I F S +SAC+ + +G++ A
Sbjct: 534 AMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAA 593
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++ ++ + R G + EA+ +++ N+ W +L+
Sbjct: 594 GFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNSLV 637
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 232/466 (49%), Gaps = 12/466 (2%)
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
+A +F+++++ S+ N++I G LEL++ M+R + + T +L A
Sbjct: 314 SAERIFSTMNSRDGVSY--NSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSA 371
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
CAS + +G +H I+ G +D ++ +L+D+Y+KC + K F ++V W
Sbjct: 372 CASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLW 431
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
VM+ AY Q + ++ +F++ Q EG++ + T S+ LG + + +H + I
Sbjct: 432 NVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK 491
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
F ++ + + ++ MYA+ G + A + + + D++SW +M+ GY+Q+ SEAL L
Sbjct: 492 TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQL 551
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F+EM+ + + + +SAC + + + G++ H + D ++ NA++ +YA+
Sbjct: 552 FEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYAR 611
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG + A F I ++N SWN L++G G+ +AL+ F +ML + + T+
Sbjct: 612 CGRIQEAYLAFEKI--GDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYG 669
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
S +SA + I +G++ + + K E + ++ + ++G + +A+ M
Sbjct: 670 SAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-E 728
Query: 480 PNDSVWGALLLACRIHG-EIAANYLFQ------LEPEHTGYFVLMS 518
N W A++ HG + A LF+ + P H + ++S
Sbjct: 729 RNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 200/400 (50%), Gaps = 8/400 (2%)
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
++L + M G+ SN + ++L+ C ++ + E +H I ++GF + + +LVD
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
Y + G KVFDE S R + SW MI + + + LF++ EG+ + T
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162
Query: 215 VSVASA-VGQLGDVL--KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
V A VG GD+ + VH F + N ++ +Y++ G +E A+ VF+
Sbjct: 163 AGVLKACVG--GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ +D+++W +M++G QNG EA+LLF +M S+ P P ++SA T + +LG
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ H +I + + N ++ +Y++ L +AE +F+ ++ R+ S+N LI+G
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNS--RDGVSYNSLISGLV 338
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
G +ALE F++M + +KPD IT S+LSAC+ G + +G + + K + ++
Sbjct: 339 QQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII 398
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
++D+ + + A N +W +L+A
Sbjct: 399 LEGSLLDLYSKCADVETAHKFFLXTE-TENIVLWNVMLVA 437
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/647 (38%), Positives = 379/647 (58%), Gaps = 45/647 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A S+F +I + +WN M R +A + V L+LY M G+ N +TFPF+LK+C
Sbjct: 28 AISVFETI--PEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSC 85
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------- 169
A + EG+ +HG +++ GF D YV +L+ MYA+ G+ +D KVFD
Sbjct: 86 AKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYT 145
Query: 170 --------------------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
E+ ++D+VSW MI+ Y + ++AL LF++ + +
Sbjct: 146 ALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKP 205
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D T+ +V SA Q G + + VH + + F +L I N+++ +Y++CG VE A +
Sbjct: 206 DESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELL 265
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+ + +D+ISWN+++ GY EALLLF EM S PN VT L ++ AC +LG+
Sbjct: 266 EGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 325
Query: 330 LGRKFHGYIINSNMKIDAT----LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+GR H YI + T LR +++DMYAKCGD+D A + +D R++S+WN
Sbjct: 326 IGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQV-SDSSAFNRSLSTWNA 384
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-L 444
+I G+ MHG A + FS+M + G++PD ITF +LSACSH+G++D GR F M +
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDY 444
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA----- 499
++ P+++HY CM+D+LG +G EA +MI MP+ P+ +W +LL AC+IHG +
Sbjct: 445 NITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 504
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA-AFSVIEYGKDIQ 558
A L ++EPE+ G +VL+SNIYA + KW EV K+R + +KG+KK S IE +
Sbjct: 505 AKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVH 564
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D+++P +E+Y +E M V ++ AG++PD S L ++E+E +E L +HSEKLA+
Sbjct: 565 EFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 624
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
AFG+++ P + + KNLRVC +CH A + IS IY+R+II RD R
Sbjct: 625 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/670 (36%), Positives = 381/670 (56%), Gaps = 16/670 (2%)
Query: 23 ASLRQIHSSLTTSGL-----INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFL 77
A++ ++ + GL I + + + ++ Y+ G AR+LF+ N
Sbjct: 310 AAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDM--NGGKNVVS 367
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WNT+I Y+ G EL M+R + N T VL AC+ +L K +HG
Sbjct: 368 WNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYA 427
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
R GFL D V A V YAKC D +VF M + + SW +I A+ Q P ++L
Sbjct: 428 FRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSL 487
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF G+ D TI S+ A +L + + +HG+ + N D I S++++Y
Sbjct: 488 DLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLY 547
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+C ++ +L+FD ME + L+ WN M+TG+ QN EAL F +M + KP +
Sbjct: 548 IQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVT 607
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC+ + + +LG++ H + + +++ DA + A++DMYAKCG ++ ++N+F+ ++
Sbjct: 608 GVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVN-- 665
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
E++ + WNV+IAGYG+HGHG KA+E F M +G +PD TF +L AC+HAGL+ EG K
Sbjct: 666 EKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLK 725
Query: 437 CFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
M L VKP+++HYAC+VDMLGRAG L EA ++ +MP P+ +W +LL +CR +
Sbjct: 726 YLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNY 785
Query: 496 GEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
G++ + L +LEP +VL+SN+YA KW EV K+R+ MK GL K A S
Sbjct: 786 GDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSW 845
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
IE G + F +D K++ + + +I GY PD SC LH++E+E + +L
Sbjct: 846 IEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILK 905
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSEKLA++FG++N ++V KNLR+C DCH+A + +S + +R IIVRD RFHHF+
Sbjct: 906 SHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFK 965
Query: 671 GGTCSCNDYW 680
G C+C D+W
Sbjct: 966 NGLCTCGDFW 975
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 235/439 (53%), Gaps = 16/439 (3%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++C ++ R++H+ ++ S + + L +II Y+ G P+ +R +F++
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGISSNSYTFPFVLKACASNSLILEGK 130
FL+N ++ Y+ N + + L+ + + ++ +++T P V KACA + + G+
Sbjct: 158 DL--FLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGE 215
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
VH ++ G SD++V AL+ MY KCG + KVF+ M R+LVSW ++ A +
Sbjct: 216 AVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENG 275
Query: 191 KPEEALILFQK---TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
E +F++ +++EGL+ D T+V+V A +G+V VHG A E++
Sbjct: 276 GFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVT 335
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ NS+V MY++CG + +AR +FDM ++++SWN+++ GY + G L EMQ +
Sbjct: 336 VNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREE 395
Query: 308 -CKPNPVTALILVSACTYLGSRQL--GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ N VT L ++ AC+ G QL ++ HGY D + NA + YAKC LD
Sbjct: 396 KVRVNEVTVLNVLPACS--GEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLD 453
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
AE +F + + VSSWN LI + +G K+L+ F M++ G+ PD T S+L A
Sbjct: 454 CAERVFCGMEG--KTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLA 511
Query: 425 CSHAGLIDEGRKCFADMTK 443
C+ + G++ M +
Sbjct: 512 CARLKFLRCGKEIHGFMLR 530
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 148/306 (48%), Gaps = 15/306 (4%)
Query: 194 EALILFQKTQQEGLLSDS----VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCI 248
+AL L Q G +S S I + A G ++ + VH + L D+ +
Sbjct: 71 DALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVL 130
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SD 307
I+AMY+ CG+ +R VFD +++DL +N++L+GY +N +A+ LF E+ + +D
Sbjct: 131 STRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATD 190
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
P+ T + AC + +LG H + + DA + NA++ MY KCG +++A
Sbjct: 191 LAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAV 250
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML---EEGVKPDHITFTSILSA 424
+F + RN+ SWN ++ +G + F ++L EEG+ PD T +++ A
Sbjct: 251 KVFETMR--NRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPA 308
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMI-KQMPLPP 480
C+ G + G KL + EV +VDM + G L EA FDM + +
Sbjct: 309 CAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSW 368
Query: 481 NDSVWG 486
N +WG
Sbjct: 369 NTIIWG 374
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/677 (36%), Positives = 397/677 (58%), Gaps = 19/677 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L+ C LA L R++H++L G + A +++ Y G ++A +F I D
Sbjct: 271 VLQVCAELAQLNHGRELHAALLKCG-TEFNIQCNA-LLVMYARCGWVDSALRVFREI-GD 327
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
K Y WN+M+ Y N E ++ + M ++G + + +L A ++ G+
Sbjct: 328 KDY-ISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGRE 386
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH ++ SD + L+DMY KC + +VFD M ++D VSWT +I Y Q+ +
Sbjct: 387 VHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSR 446
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EA+ F+ Q+EG+ D + + S+ A L + + VH YAI N L DL ++N
Sbjct: 447 YSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLILKNR 505
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
I+ +Y CG V A +F+M++K+D+++W SM+ + +NG EA+ LF +M N+ +P+
Sbjct: 506 IIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPD 565
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V + ++ A L S G++ HG++I ++ + ++++DMY+ CG ++ A +F+
Sbjct: 566 SVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFD 625
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ++V W +I GMHGHG++A+ F +MLE GV PDH++F ++L ACSH+ L+
Sbjct: 626 E--AKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLV 683
Query: 432 DEGRKCFADM--TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
DEG K + DM +K ++P +HYAC+VD+LGR+G EA+ IK MPL P VW ALL
Sbjct: 684 DEG-KFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALL 742
Query: 490 LACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACRIH IA + L +LEP++ G +VL+SN++A KW V ++R M +GL+K
Sbjct: 743 GACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRK 802
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG-YMPDLSCALHDVEDE 603
A S IE G + F D + + ++ K+ + +++ G Y+ D S LHDV +E
Sbjct: 803 DPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEE 862
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
++ +L+ HSE+LA++FG+++ +++ KNLRVC DCH + +S ++ R+I+VRDA
Sbjct: 863 EKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDA 922
Query: 664 NRFHHFEGGTCSCNDYW 680
NRFHHF GGTCSC D+W
Sbjct: 923 NRFHHFSGGTCSCGDFW 939
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 169/601 (28%), Positives = 294/601 (48%), Gaps = 38/601 (6%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C R ++H SGL L A ++ Y G ++A +F + +
Sbjct: 169 VLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANA-LVGMYAKCGLLDSALRVFEWMRDG 227
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ + WN+ I NG +E L+L+ M+ G S NSYT VL+ CA + + G+
Sbjct: 228 RDVAS-WNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRE 286
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +++ G + A LV MYA+CG D +VF E+ +D +SW M++ Y Q
Sbjct: 287 LHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRL 345
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EA+ F + Q G D IVS+ SAVG LG ++ + VH YA+ DL I N+
Sbjct: 346 YAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANT 405
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY +C +VE + VFD M +D +SW +++ Y Q+ + SEA+ F Q K +
Sbjct: 406 LMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVD 465
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
P+ ++ AC+ L S L ++ H Y I + + +D L+N ++D+Y +CG++ A N+F
Sbjct: 466 PMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFE 524
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ++++ +W ++ + +G +A+ F +ML G++PD + IL A + +
Sbjct: 525 ML--DKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSL 582
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G++ + + E + +VDM G + A + + + +W A++ A
Sbjct: 583 TKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKC-KDVVLWTAMINA 641
Query: 492 CRIHGE-IAANYLFQ------LEPEHTGYFVLMSNIYAAS-NKWREVGKLREDM-----K 538
+HG A Y+F+ + P+H + L+ YA S +K + GK DM K
Sbjct: 642 TGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL---YACSHSKLVDEGKFYLDMMVSKYK 698
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL-SCAL 597
+ ++ A V G+ Q +E YK ++SM +E K + L +C +
Sbjct: 699 LQPWQEHYACVVDLLGRSGQT-----------EEAYKFIKSMPLEPKSVVWCALLGACRI 747
Query: 598 H 598
H
Sbjct: 748 H 748
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/517 (30%), Positives = 242/517 (46%), Gaps = 52/517 (10%)
Query: 3 RLGPSTE--GFYDQLLKSCNFLASLRQIHSSLTTSGLI--NQALHLGAKIIIKYTTYGEP 58
R P T+ G+ L+ ++ RQ+H+ +G + + A L K++ Y G
Sbjct: 50 RAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRL 109
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS----GISSNSYTFP 114
A LF+ + +S WN +I A ++G E + +Y MR S G + + T
Sbjct: 110 PDAHRLFDGMPARTVFS--WNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLA 167
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM-SV 173
VLKAC + G VHG +++G + V ALV MYAKCG D +VF+ M
Sbjct: 168 SVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDG 227
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
RD+ SW I+ Q EAL LF++ Q +G +S T V V +L AQ
Sbjct: 228 RDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAEL-----AQLN 282
Query: 234 HGYAICNAFLE---DLCIQ-NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
HG + A L+ + IQ N+++ MYARCG V+ A VF + +D ISWNSML+ Y+Q
Sbjct: 283 HGRELHAALLKCGTEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQ 342
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
N +EA+ F EM + P+ + L+SA +LG GR+ H Y + + D +
Sbjct: 343 NRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQI 402
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
N +MDMY KC ++ + +F+ + + SW +IA Y +A+ F +E
Sbjct: 403 ANTLMDMYIKCYSVECSARVFDRMRIKDH--VSWTTIIACYAQSSRYSEAIGKFRTAQKE 460
Query: 410 GVKPDHITFTSILSACS----------------HAGLIDE-------------GRKCFA- 439
G+K D + SIL ACS GL+D G C+A
Sbjct: 461 GIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYAL 520
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
++ ++ K ++ + MV+ G L+EA + +M
Sbjct: 521 NIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKM 557
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/696 (34%), Positives = 399/696 (57%), Gaps = 51/696 (7%)
Query: 32 LTTSGLINQAL------HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
L+T ++ +L HLG ++I G+ N AR LF++I + +T+I A
Sbjct: 82 LSTEAMVPPSLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTC--STLISAL 139
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+G E +++YS+++ GI + F KACA + L K VH D R G +SD
Sbjct: 140 TTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDV 199
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V AL+ Y KC + +VFD++ VRD+VSWT + + Y + P + + +F++
Sbjct: 200 FVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWS 259
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + +T+ S+ A +L D+ + +HG+A+ + + +L + +++V++YA+C +V +A
Sbjct: 260 GVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREA 319
Query: 266 RLVFDMMEKRDLISWNSMLTGY-----------------------------------IQN 290
R+VFD+M RD++SWN +LT Y ++N
Sbjct: 320 RMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMEN 379
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G++ EA+ +F +MQ KPN +T ++ AC++ + ++G++ H Y+ D T
Sbjct: 380 GRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTST 439
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++ MYAKCGDL+ + N+F+ + ++V +WN +I MHG+G++AL F +ML
Sbjct: 440 TALLYMYAKCGDLNLSRNVFDMMR--RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSR 497
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEA 469
V+P+ +TFT +LS CSH+ L++EG + F M + V+P+ HY+C+VD+ RAG L EA
Sbjct: 498 VQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA 557
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAAS 524
+ I+ MP+ P S WGALL ACR++ +I+A LF++EP + G +V + NI +
Sbjct: 558 YKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTA 617
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
W E ++R MK +G+ K S ++ G + F D+ N ++Y ++ + ++
Sbjct: 618 KMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKM 677
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
KMAGY PD L D++ E++ L HSEKLAVAFGI+NL ++ ++V KNLR+C DCH
Sbjct: 678 KMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCH 737
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A +++S + I+VRD+ RFHHF+ G CSC D W
Sbjct: 738 NAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/675 (36%), Positives = 378/675 (56%), Gaps = 60/675 (8%)
Query: 17 KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP-----NTARSLFNSIHND 71
KS L L Q+H + SG GA + Y P + A +F+SI N
Sbjct: 41 KSITSLQYLTQLHGLVLRSGHFQDHYVSGALL----KCYANPHFSNFDFALKVFSSIPNP 96
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
F+WN +I+ N + + Y M N +T+P + KAC+ + EG+
Sbjct: 97 NV--FIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQ 153
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG +++ G SD ++++A + MYA G+ +D K+F D+V W MI Y +
Sbjct: 154 IHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGV 212
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E A LF + + + S +V I +A
Sbjct: 213 LEAAKGLFAQMPVKNIGSWNVMINGLAKG------------------------------- 241
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
GN+ AR +FD M +RD ISW+SM+ GYI G+ EAL +F +MQ + +P
Sbjct: 242 --------GNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+++AC+ +G+ GR H Y+ +++K+DA L A++DMYAKCG LD +F
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ ER + +WN +I G +HG ALE FS++ E +KP+ IT +L+AC+HAG +
Sbjct: 354 EM--KEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV 411
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
D+G + F M + V PE++HY CMVD+LGR+G EA D+I MP+ PN +VWGALL
Sbjct: 412 DKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLG 471
Query: 491 ACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRIHG E L +LEP+++G +VL+SNIYA ++ +V K+R+ MK++G+K
Sbjct: 472 ACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTV 531
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S+++ + F D +P KE+Y+K++ + ++MAG+ PD S L D+++E++
Sbjct: 532 PGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEK 591
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +NYHSEKLA+AFG++N P + + KNLRVC+DCHSA + IS I+ R+IIVRD R
Sbjct: 592 ETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVR 651
Query: 666 FHHFEGGTCSCNDYW 680
+HHF+ GTCSC D+W
Sbjct: 652 YHHFKNGTCSCKDFW 666
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 259/721 (35%), Positives = 400/721 (55%), Gaps = 55/721 (7%)
Query: 7 STEGFYDQLLKSCNFLAS---LRQIHSSLTTSGLINQAL-HLGAKIIIK-YTTYGEPNTA 61
S++ L+K+ + S +Q+H+ + Q+L H A I+I YT + A
Sbjct: 3 SSKALIKTLIKNPTRIKSKSQAKQLHAQFIRT----QSLSHTSASIVISIYTNLKLLHEA 58
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
LF ++ + + W ++IR + + + L + MR SG + FP VLK+C
Sbjct: 59 LLLFKTLKSPPVLA--WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC---GQTDDGCKVFDEMSVR---- 174
+ G+ VHG I+R G D Y AL++MYAK G VFDEM R
Sbjct: 117 MMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNS 176
Query: 175 -----------------------------DLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
D+VS+ +I Y Q+ E+AL + ++
Sbjct: 177 GDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT 236
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
L DS T+ SV + DV+K + +HGY I D+ I +S+V MYA+ +E +
Sbjct: 237 DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF + RD ISWNS++ GY+QNG+ +EAL LF +M + KP V ++ AC +L
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ LG++ HGY++ + + +A++DMY+KCG++ A +F+ ++ + SW
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE--VSWTA 414
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I G+ +HGHG +A+ F +M +GVKP+ + F ++L+ACSH GL+DE F MTK+
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 474
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+ E++HYA + D+LGRAG L EA++ I +M + P SVW LL +C +H E
Sbjct: 475 GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A +F ++ E+ G +VLM N+YA++ +W+E+ KLR M+ KGL+K A S IE G
Sbjct: 535 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHG 594
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F + DR +P ++ + ++++ +++ GY+ D S LHDV++E + +L HSE+LAVA
Sbjct: 595 FVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVA 654
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FGI+N P ++VTKN+R+C DCH A +FIS I R+IIVRD +RFHHF G CSC DY
Sbjct: 655 FGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714
Query: 680 W 680
W
Sbjct: 715 W 715
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/672 (34%), Positives = 386/672 (57%), Gaps = 43/672 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS--G 105
I+ Y+ G + LF+++ S WN++I YA G ++++ Y+ M ++
Sbjct: 81 ILSAYSKLGRVSEMEYLFDAMPRRDGVS--WNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK-------- 157
+ N TF +L + + G+ +HG +++ GF+S +V + LVDMY+K
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198
Query: 158 -----------------------CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
CG+ +D ++F EM RD +SWT MIT + Q +
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRD 258
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
A+ +F++ + E L D T SV +A G + + + + VH Y I + +++ + +++V
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVD 318
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY +C N++ A VF M ++++SW +ML GY QNG + EA+ F +MQ +P+ T
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFT 378
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
++S+C L S + G +FH + S + T+ NA++ +Y KCG ++ + +FN+I
Sbjct: 379 LGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEI- 437
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
S ++ +W L++GY G + + F ML G+KPD +TF +LSACS AGL+++G
Sbjct: 438 -SFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKG 496
Query: 435 RKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
+ F M + + P HY CM+D+ RAG + EA + I +MP P+ W LL +CR
Sbjct: 497 NQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCR 556
Query: 494 IHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
+G + AA +L +L+P +T +VL+S++YAA KW EV +LR+DM++KGL+K
Sbjct: 557 FYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGC 616
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S I+Y + F D+ NP+ ++Y ++E + ++ GY+PD++ LHDV D ++ M
Sbjct: 617 SWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKM 676
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
LN+HSEKLA+AFG++ + P ++V KNLRVC+DCH+A ++IS I R+I+VRD RFH
Sbjct: 677 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHL 736
Query: 669 FEGGTCSCNDYW 680
F+ GTCSC D+W
Sbjct: 737 FKDGTCSCGDFW 748
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 207/438 (47%), Gaps = 67/438 (15%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+LK C + K +H II+T ++++ L+ YAK G CKVFD+M +
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQE---------------GLLSDSV-------- 212
L SW +++AY + + E LF + GL+ SV
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 213 ----------TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA----- 257
T ++ + G V + +HG+ + F+ + + + +V MY+
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194
Query: 258 --------------------------RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
RCG VE ++ +F M +RD ISW SM+TG+ QNG
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+A+ +F EM+ + + + T +++AC + + Q G++ H YII ++ K + + +
Sbjct: 255 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVAS 314
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
A++DMY KC ++ +AE +F + + +NV SW ++ GYG +G+ +A++ FS M + G+
Sbjct: 315 ALVDMYCKCKNIKSAEAVFKKM--TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+PD T S++S+C++ ++EG + A + + +V + G+ G + ++
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432
Query: 472 MIKQMPLPPNDSVWGALL 489
+ ++ ++ W AL+
Sbjct: 433 LFNEISF-KDEVTWTALV 449
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 129/273 (47%), Gaps = 32/273 (11%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-- 307
N+I++ Y++ G V + +FD M +RD +SWNS+++GY G +++ ++ M +D
Sbjct: 79 NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
N +T L+ + G +LGR+ HG+++ + + ++DMY+K G + A
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198
Query: 368 NMFNDIHPS-----------------------------ERNVSSWNVLIAGYGMHGHGRK 398
+F+++ ER+ SW +I G+ +G R
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRD 258
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
A++ F +M E ++ D TF S+L+AC + EG++ A + + K + + +VD
Sbjct: 259 AIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVD 318
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
M + + A + K+M N W A+L+
Sbjct: 319 MYCKCKNIKSAEAVFKKMTC-KNVVSWTAMLVG 350
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/708 (34%), Positives = 404/708 (57%), Gaps = 47/708 (6%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L C L ++Q+H+ + + +IN L+ + ++ + A ++F+SI + S
Sbjct: 19 LSFCKSLNHIKQLHAHILRT-VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPE-S 76
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
++N +R + + T+ Y +R G + ++F +LKA + S + EG +HG
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+ L D +V+ +DMYA CG+ + VFDEMS RD+V+W MI Y + +EA
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN--------------- 240
LF++ + ++ D + + ++ SA G+ G++ +A++ + I N
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 241 -----------AFLEDLCIQN-----SIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
F + ++N ++V+ Y++CG ++ A+++FD EK+DL+ W +M+
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
+ Y+++ EAL +F+EM S KP+ V+ ++SAC LG + H I + ++
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ ++ NA+++MYAKCG LD ++F + RNV SW+ +I MHG AL F+
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKM--PRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRA 463
+M +E V+P+ +TF +L CSH+GL++EG+K FA MT + ++ P+++HY CMVD+ GRA
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMS 518
L EA ++I+ MP+ N +WG+L+ ACRIHGE+ AA + +LEP+H G VLMS
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 554
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA +W +V +R M+ K + K S I+ F D+ + E+Y K++
Sbjct: 555 NIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 614
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE------AVVQ 632
+ ++K+AGY+PD L DVE+E+++ ++ +HSEKLA+ FG+MN E V++
Sbjct: 615 EVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIR 674
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ KNLRVC DCH F+ +S +Y R+IIVRD RFH ++ G CSC DYW
Sbjct: 675 IVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/642 (37%), Positives = 383/642 (59%), Gaps = 33/642 (5%)
Query: 47 KIIIKYTTYGE-PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG 105
KI+++ G+ P +A LF+ + + S WN+MI Y +NG LE+Y M G
Sbjct: 189 KIMVEKGIEGKRPESASELFDKLCDRDVIS--WNSMISGYVSNGLTERGLEIYKQMMYLG 246
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
I + T VL CA++ + GK VH I++ F L+DMY+KCG D
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+VF++M R++VSWT MI Y + + + A+ L Q+ ++EG+ D V S+ A + G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSG 366
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + VH Y N +L + N+++ MY +CG+++ A VF M +D+ISWN+M+
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI- 425
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+ KP+ T ++ AC L + + G++ HGYI+ +
Sbjct: 426 --------------------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSS 465
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + NA++D+Y KCG L A +F D+ PS +++ SW V+I+GYGMHG+G +A+ F++
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLF-DMIPS-KDLVSWTVMISGYGMHGYGNEAIATFNE 523
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M + G++PD ++F SIL ACSH+GL+++G + F M +++P+++HYACMVD+L R G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSN 519
L +A++ I+ +P+ P+ ++WGALL CRI+ +I A +F+LEPE+TGY+VL++N
Sbjct: 584 NLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLAN 643
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN-PYWKEVYKKVE 578
IYA + KW EV ++RE + KGL+K S IE + F + + + P+ K++ ++
Sbjct: 644 IYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLK 703
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
M ++K GY P AL + ++ +E L HSEKLA+AFG++ L P V+VTKNLR
Sbjct: 704 KMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLR 763
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH +F+S RR+I++RD+NRFHHF+ G CSC +W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 207/474 (43%), Gaps = 85/474 (17%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
+N I + G+ +EL ++S + + +Y+ VL+ CA + + +GK VH I
Sbjct: 69 YNAKILHFCQLGNLENAMELVCMCQKSELETKTYSS--VLQLCAGSKSLTDGKKVHSIIK 126
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV------------------------ 173
D + LV +YA CG +G +VFD M
Sbjct: 127 SNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 174 ---------------------------RDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
RD++SW MI+ Y E L ++++ G
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLG 246
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ D TI+SV G + +AVH AI + F + N+++ MY++CG+++ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VF+ M +R+++SW SM+ GY ++G++ A+ L +M+ K + V ++ AC G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSG 366
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
S G+ H YI +NM+ + + NA+MDMY KCG +D A ++F+ + +++ SWN +
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTM--VVKDIISWNTM 424
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I +KPD T IL AC+ ++ G++ + +
Sbjct: 425 IG---------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGY 463
Query: 447 KPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ +VD+ + G L A FDMI P D V W ++ +HG
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMI-----PSKDLVSWTVMISGYGMHG 512
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/675 (37%), Positives = 389/675 (57%), Gaps = 14/675 (2%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
+LL SC L +L ++H+ L S + L + + Y G+ A S + S
Sbjct: 8 RLLSSCAALRTLTRLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTSPS 67
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
WN ++ A++ E L ++ + + +S TF L ACA + G+VV
Sbjct: 68 SIPAWNALLAAHSRGASPHEALRVFRALPPAA-RPDSTTFTLALSACARLGDLATGEVVT 126
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G+ +D +V ++++++YAKCG DD KVFD M RD V+W+ M+T + A +P
Sbjct: 127 DRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPV 186
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+A+ ++ + +++GL +D V IV V A GD +VHGY + +A D+ I S+V
Sbjct: 187 QAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLV 246
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN-- 311
MYA+ G ++AR VF++M R+ +SW+++++ Q G A EAL LF MQ S PN
Sbjct: 247 DMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSG 306
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
PV +L AC+ LG +LG+ HG+I+ + +++D + AV+DMY+KCG L +A+ +F+
Sbjct: 307 PVVGALL--ACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFD 363
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ R++ SWNV+IA G HG GR AL F +M V+PDH TF S+LSA SH+GL+
Sbjct: 364 KV--VSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLV 421
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG+ F M + ++P KH C+VD+L R+G + EA ++ + P S+ ALL
Sbjct: 422 EEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLS 481
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
C + GE A + +L+P G L+SN+YAA+ W +V ++R+ MK+ G KK
Sbjct: 482 GCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKA 541
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F D+ +P +++ + V + E++ GY+P HD+E+ +
Sbjct: 542 PGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVK 601
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +L+ HSE+LA AFG++N +P + V KNLRVC DCH A +++S I R+I+VRDA R
Sbjct: 602 EQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKR 661
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSC DYW
Sbjct: 662 FHHFKDGACSCGDYW 676
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/683 (34%), Positives = 393/683 (57%), Gaps = 45/683 (6%)
Query: 39 NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY 98
N HLG ++I G+ N AR LF++I + +T+I A +G E +++Y
Sbjct: 9 NIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTC--STLISALTTHGLSNEAIKIY 66
Query: 99 STMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC 158
S+++ GI + F KACA + L K VH D R G +SD +V AL+ Y KC
Sbjct: 67 SSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKC 126
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
+ +VFD++ VRD+VSWT + + Y + P + + +F++ G+ + +T+ S+
Sbjct: 127 KCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSIL 186
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
A +L D+ + +HG+A+ + + +L + +++V++YA+C +V +AR+VFD+M RD++
Sbjct: 187 PACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVV 246
Query: 279 SWNSMLTGY-----------------------------------IQNGQASEALLLFDEM 303
SWN +LT Y ++NG++ EA+ +F +M
Sbjct: 247 SWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM 306
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
Q KPN +T ++ AC++ + ++G++ H Y+ D T A++ MYAKCGDL
Sbjct: 307 QKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDL 366
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ + N+F+ + ++V +WN +I MHG+G++AL F +ML V+P+ +TFT +LS
Sbjct: 367 NLSRNVFDMMR--RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLS 424
Query: 424 ACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
CSH+ L++EG + F M + V+P+ HY+C+VD+ RAG L EA+ I+ MP+ P
Sbjct: 425 GCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTA 484
Query: 483 SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
S WGALL ACR++ +I+A LF++EP + G +V + NI + W E ++R M
Sbjct: 485 SAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILM 544
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
K +G+ K S ++ G + F D+ N ++Y ++ + ++KMAGY PD L
Sbjct: 545 KERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVL 604
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
D++ E++ L HSEKLAVAFGI+NL ++ ++V KNLR+C DCH+A +++S +
Sbjct: 605 QDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVI 664
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I+VRD+ RFHHF+ G CSC D W
Sbjct: 665 IVVRDSLRFHHFKNGNCSCKDLW 687
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/669 (36%), Positives = 384/669 (57%), Gaps = 53/669 (7%)
Query: 22 LASLRQIHSSLTTSGLINQALH----LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFL 77
+ +L+ +HS + N + H LG K++ Y GEP AR++F+ I +
Sbjct: 48 IKTLKNVHSKV-----FNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVI--PERNVIF 100
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
+N MIR+Y NN + L ++ M G S + YT+P VLKAC+ + + G +HG +
Sbjct: 101 YNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVF 160
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ G + +V L+ +Y KCG + V DEM +D+VSW M+ Y Q + ++AL
Sbjct: 161 KVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALD 220
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
+ ++ D+ T+ S+ AV
Sbjct: 221 ICREMDGVRQKPDACTMASLLPAVTNTSS------------------------------- 249
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
NV +F +EK+ L+SWN M++ Y++N +++ L+ +M + +P+ +T
Sbjct: 250 --ENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCAS 307
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ AC L + LGR+ H Y+ + + L N+++DMYA+CG L+ A+ +F+ +
Sbjct: 308 VLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRM--KF 365
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
R+V+SW LI+ YGM G G A+ F++M G PD I F +ILSACSH+GL++EG+
Sbjct: 366 RDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFY 425
Query: 438 FADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH- 495
F MT + P ++H+AC+VD+LGR+G + EA+++IKQMP+ PN+ VWGALL +CR++
Sbjct: 426 FKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYS 485
Query: 496 ----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
G +AA+ L QL PE +GY+VL+SNIYA + +W EV +R MK + ++K S +
Sbjct: 486 NMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNV 545
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E + F D +P KE+Y+++ + ++K GY+P ALHDVE+ED+E L
Sbjct: 546 ELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAV 605
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSEKLA+ F I+N T E+ +++TKNLRVC DCH A + IS I +R+I++RD NRFHHF+
Sbjct: 606 HSEKLAIVFAILN-TQESPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKD 664
Query: 672 GTCSCNDYW 680
G CSC DYW
Sbjct: 665 GICSCGDYW 673
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/678 (36%), Positives = 386/678 (56%), Gaps = 47/678 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYS---FLWNTMIRAYANNGHCVETLELYSTMRRS 104
II Y G+ A F + K + W +I NG+ E L ++ M
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 105 GISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL-SDSYVQAALVDMYAKC----- 158
G+ NS T + AC + SL+ G+ +HG I+ L SD V +LVD YAKC
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 159 --------------------------GQTDDGCKVFDEMSVR----DLVSWTVMITAYEQ 188
G ++ ++ EM + D+++W ++T + Q
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ AL FQ+ G+ ++ TI +A GQ+ ++ + +HGY + N +
Sbjct: 477 YGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+++++MY+ C ++E A VF + RD++ WNS+++ Q+G++ AL L EM S+
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+ N VT + + AC+ L + + G++ H +II + + N+++DMY +CG + +
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRR 656
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F D+ P +R++ SWNV+I+ YGMHG G A+ F Q G+KP+HITFT++LSACSH+
Sbjct: 657 IF-DLMP-QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHS 714
Query: 429 GLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GLI+EG K F M T+ ++ P V+ YACMVD+L RAG E + I++MP PN +VWG+
Sbjct: 715 GLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGS 774
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACRIH E AA YLF+LEP+ +G +VLM+NIY+A+ +W + K+R MK +G+
Sbjct: 775 LLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGV 834
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KP S IE + + F D +P +++ K+ES+ +IK GY+PD + L DV++
Sbjct: 835 TKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDE 894
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+++E L HSEK+A+AFG+++ T +++ KNLRVC DCHSA +FIS + +R II+RD
Sbjct: 895 DEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRD 954
Query: 663 ANRFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 955 NYRFHHFVDGVCSCGDYW 972
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 215/446 (48%), Gaps = 49/446 (10%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+ C L +LR Q+H+ L +G ++ LG++++ Y G AR +F+ +
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNG-VDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 150
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+S W ++ Y G ET++L+ M G+ + + FP V KAC+
Sbjct: 151 SERNVFS--WTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRV 208
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK V+ ++ GF +S V+ +++DM+ KCG+ D + F+E+ +D+ W +M++ Y
Sbjct: 209 GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 268
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ ++AL + G+ D VT
Sbjct: 269 KGEFKKALKCISDMKLSGVKPDQVT----------------------------------- 293
Query: 249 QNSIVAMYARCGNVEKARLVFDMME-----KRDLISWNSMLTGYIQNGQASEALLLFDEM 303
N+I++ YA+ G E+A F M K +++SW +++ G QNG EAL +F +M
Sbjct: 294 WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKM 353
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN-SNMKIDATLRNAVMDMYAKCGD 362
KPN +T VSACT L + GR+ HGY I + D + N+++D YAKC
Sbjct: 354 VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRS 413
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
++ A F I + ++ SWN ++AGY + G +A+E S+M +G++PD IT+ ++
Sbjct: 414 VEVARRKFGMI--KQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLV 471
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKP 448
+ + G + F M + + P
Sbjct: 472 TGFTQYGDGKAALEFFQRMHSMGMDP 497
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 186/411 (45%), Gaps = 59/411 (14%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L+ C + G VH ++ G ++ + L+++Y + G +D ++FD+MS R+
Sbjct: 95 ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+ SWT ++ Y EE + LF EG+ D V A +L + + V+
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
Y + F + C++ SI+ M+ +CG ++ AR F+ +E +D+ WN M++GY G+ +
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL +M+ S KP+ VT NA++
Sbjct: 275 ALKCISDMKLSGVKPDQVTW-----------------------------------NAIIS 299
Query: 356 MYAKCGDLDTAENMF------NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
YA+ G + A F D P NV SW LIAG +G+ +AL F +M+ E
Sbjct: 300 GYAQSGQFEEASKYFLEMGGLKDFKP---NVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYE 468
GVKP+ IT S +SAC++ L+ GR+ K+ + ++ +VD + +
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 469 A---FDMIKQMPLPPNDSVWGALLLACRIHG------EIAANYLFQ-LEPE 509
A F MIKQ L W A+L + G E+ + FQ +EP+
Sbjct: 417 ARRKFGMIKQTDLVS----WNAMLAGYALRGSHEEAIELLSEMKFQGIEPD 463
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 150/332 (45%), Gaps = 28/332 (8%)
Query: 275 RDLISWNSMLTGYI------QNGQASEALLLFDEMQNSDCKPNPVTALI--LVSACTYLG 326
R L + +TG+ +NG + A +L M ++ P+ + ++ C L
Sbjct: 46 RKLTNARQRITGFSGGGSVHRNGVLNNAAMLLSSMDLTN--PDECIEIYASILQKCRKLY 103
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ +LG + H ++ + + + L + ++++Y + G ++ A MF+ + SERNV SW +
Sbjct: 104 NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM--SERNVFSWTAI 161
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
+ Y G + ++ F M+ EGV+PDH F + ACS G+ + M +
Sbjct: 162 MEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGF 221
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-------IA 499
+ ++DM + G + A +++ + +W ++ GE I+
Sbjct: 222 EGNSCVKGSILDMFIKCGRMDIARRFFEEIEF-KDVFMWNIMVSGYTSKGEFKKALKCIS 280
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK--KP--AAFSVIEYGK 555
L ++P+ + ++S YA S ++ E K +M GLK KP +++ + G
Sbjct: 281 DMKLSGVKPDQVTWNAIISG-YAQSGQFEEASKYFLEM--GGLKDFKPNVVSWTALIAGS 337
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+ G+ + ++ + K V + V+ ++ I A
Sbjct: 338 EQNGYDF-EALSVFRKMVLEGVKPNSITIASA 368
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 253/710 (35%), Positives = 398/710 (56%), Gaps = 49/710 (6%)
Query: 14 QLLKSCNFLASLRQIHSS-LTTSGLINQALHLGAKIIIKYTTYGEPNT--ARSLFNSIHN 70
+ + C L+QIH+ L TS + + +K++ Y A+++FN I
Sbjct: 77 EFIDQCTNTMQLKQIHAHMLRTSRFCDP--YTASKLLTAYAISSCSCLIYAKNVFNQIPQ 134
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLILEG 129
Y WNT+IR YA++ ++ ++ M S N +TFPF+ KA + ++ G
Sbjct: 135 PNLYC--WNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLG 192
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
V+HG +I+ SD ++ +L++ Y G D +VF M +D+VSW MI A+
Sbjct: 193 SVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALG 252
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
P++AL+LFQ+ + + + + +T+VSV SA + D+ + + Y N F E L +
Sbjct: 253 GLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILN 312
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG----------------------- 286
N+++ MY +CG + A+ +F+ M ++D++SW +ML G
Sbjct: 313 NAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTA 372
Query: 287 --------YIQNGQASEALLLFDEMQNS-DCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
Y QNG+ AL LF EMQ S D KP+ VT + + A LG+ G H Y
Sbjct: 373 AWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVY 432
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
I ++ ++ L +++DMYAKCG+L+ A +F+ + ++V W+ +I M+G G+
Sbjct: 433 IKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVE--RKDVYVWSAMIGALAMYGQGK 490
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACM 456
AL+ FS MLE +KP+ +TFT+IL AC+HAGL++EG + F M L + P+++HY C+
Sbjct: 491 AALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCV 550
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHT 511
VD+ GRAG L +A I++MP+PP +VWGALL AC HG E+A L +LEP +
Sbjct: 551 VDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNH 610
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G FVL+SNIYA + W +V LR+ M++ +KK S I+ + F D +P+ +
Sbjct: 611 GAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQ 670
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALH-DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
++Y K++ ++ + K GY PD+S L ED E LN HSEKLA+AFG+++
Sbjct: 671 KIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQP 730
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KN+R+C DCH+ + +S +Y R I++RD RFHHF GG CSC DYW
Sbjct: 731 IRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/677 (36%), Positives = 391/677 (57%), Gaps = 19/677 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L++C L L R++H + G + + A +I Y G+ +AR +F+ +
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA-LITMYVKCGDIFSARLVFDRMPRR 259
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y N C+E L L+ MR + + T V+ AC + G+
Sbjct: 260 DRIS--WNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGRE 317
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VHG +I+TGF+++ V +L+ M++ G D+ VF +M +DLVSWT MI+ YE+
Sbjct: 318 VHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGL 377
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
PE+A+ + + EG++ D +TI SV SA LG + K +H +A + + NS
Sbjct: 378 PEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANS 437
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY++C ++KA VF + +++ISW S++ G N ++ EAL F +M S KPN
Sbjct: 438 LIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPN 496
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++SAC +G+ G++ H + + + + D L NA++DMY +CG ++ A N FN
Sbjct: 497 SVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFN 556
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
E++V+SWN+L+ GY G G A+E F +M+E V PD ITFTS+L ACS +G++
Sbjct: 557 S---CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+G + F M K + P +KHYA +VD+LGRAG L +A++ IK+MP+ P+ ++WGALL
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRI+ GE+AA ++F+++ + GY++L+ N+YA S KW EV ++R+ M+ L
Sbjct: 674 ACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVD 733
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S +E + F T D +P KE+ +E +++ G D+ D +
Sbjct: 734 PGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDI-DASK 792
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ HSE+LA+AFG++N P + VTKNL +C +CH+ +FIS + RR I VRD +
Sbjct: 793 AEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQ 852
Query: 666 FHHFEGGTCSCND--YW 680
FHHF+ G CSC D YW
Sbjct: 853 FHHFKDGVCSCGDEGYW 869
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 242/466 (51%), Gaps = 9/466 (1%)
Query: 9 EGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
E Y LL+ C + + + +HS ++ + + + LG ++ + +G+ A +F
Sbjct: 94 EETYIALLRLCEWKRAASEGSRVHSYVSKT-VTRLGVRLGNALLSMFVRFGDLVEAWYVF 152
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ +S WN ++ YA G+ E L LY M GI + YTFP VL+ C
Sbjct: 153 GKMAERDLFS--WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
+ G+ VH +IR GF SD V AL+ MY KCG VFD M RD +SW MI+
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISG 270
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y + + E L LF ++ + D +T+ SV SA LGD + VHGY I F+ +
Sbjct: 271 YFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ + NS++ M++ G ++A +VF ME +DL+SW +M++GY +NG +A+ + M++
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
P+ +T ++SAC LG G H + + + + N+++DMY+KC +D
Sbjct: 391 EGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDK 450
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F+ I +NV SW +I G ++ +AL FF QM+ +KP+ +T S+LSAC
Sbjct: 451 ALEVFHRI--PNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSAC 507
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+ G + G++ A + + + ++DM R G + A++
Sbjct: 508 ARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 229/430 (53%), Gaps = 8/430 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N++I G + L +M+ +S T+ +L+ C EG VH + +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
T + AL+ M+ + G + VF +M+ RDL SW V++ Y +A +EAL L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
+ + G+ D T V G L D+ + + VH + I F D+ + N+++ MY +
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG++ ARLVFD M +RD ISWN+M++GY +N E L LF M+ P+ +T +
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+SAC LG +LGR+ HGY+I + + ++ N+++ M++ G D AE +F+ + +
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM--EFK 360
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC- 437
++ SW +I+GY +G KA+E ++ M EGV PD IT S+LSAC+ GL+D+G
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLH 420
Query: 438 -FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI-H 495
FAD T L+ V + ++DM + C+ +A ++ ++P N W +++L R+ +
Sbjct: 421 EFADRTGLTSYVIVAN--SLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNY 477
Query: 496 GEIAANYLFQ 505
A + FQ
Sbjct: 478 RSFEALFFFQ 487
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/642 (38%), Positives = 381/642 (59%), Gaps = 33/642 (5%)
Query: 47 KIIIKYTTYGE-PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG 105
KI+++ G+ +A LF+ + + S WN+MI Y +NG L +Y M G
Sbjct: 51 KIMVEKGIEGKRSESASELFDKLCDRDVIS--WNSMISGYVSNGLTERGLGIYKQMMYLG 108
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
I + T VL CA + + GK VH I++ F L+DMY+KCG D
Sbjct: 109 IDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 168
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+VF++M R++VSWT MI Y + + A+IL Q+ ++EG+ D V I S+ A + G
Sbjct: 169 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 228
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + VH Y N +L + N+++ MYA+CG++E A VF M +D+ISWN+M+
Sbjct: 229 SLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV- 287
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+ KP+ T ++ AC L + + G++ HGYI+ +
Sbjct: 288 --------------------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSS 327
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + NA++D+Y KCG L A +F D+ PS +++ SW V+IAGYGMHG+G +A+ F++
Sbjct: 328 DRHVANALVDLYVKCGVLGLARLLF-DMIPS-KDLVSWTVMIAGYGMHGYGNEAIATFNE 385
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M + G++PD ++F SIL ACSH+GL+++G + F M +++P+++HYACMVD+L R G
Sbjct: 386 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 445
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSN 519
L +A+ I+ +P+ P+ ++WGALL CRI+ +I A +F+LEPE+TGY+VL++N
Sbjct: 446 NLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLAN 505
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN-PYWKEVYKKVE 578
IYA + KW EV ++RE + KGL+K S IE + F + + + P+ K++ ++
Sbjct: 506 IYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLK 565
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
M ++K GY P AL + ++ +E L HSEKLA+AFG++ L P ++VTKNLR
Sbjct: 566 KMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 625
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH +F+S RR+I++RD+NRFHHF+ G CSC +W
Sbjct: 626 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 176/401 (43%), Gaps = 83/401 (20%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSV------------------------------------- 173
LV YA CG +G +VFD M
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 174 --------------RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
RD++SW MI+ Y E L ++++ G+ D TI+SV
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
+ G + +AVH AI ++F + N+++ MY++CG+++ A VF+ M +R+++S
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
W SM+ GY ++G + A++L +M+ K + V ++ AC GS G+ H YI
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+NM + + NA+MDMYAKCG ++ A ++F+ + +++ SWN ++
Sbjct: 242 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM--VVKDIISWNTMVG----------- 288
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
+KPD T IL AC+ ++ G++ + + + +VD+
Sbjct: 289 ----------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 338
Query: 460 LGRAGCLYEA---FDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ G L A FDMI P D V W ++ +HG
Sbjct: 339 YVKCGVLGLARLLFDMI-----PSKDLVSWTVMIAGYGMHG 374
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/663 (37%), Positives = 395/663 (59%), Gaps = 17/663 (2%)
Query: 27 QIHSSLTTSGLINQAL--HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
+IH+++ S NQ L ++ ++ + +G+ + A +F+ + D+ + WN+MI
Sbjct: 133 EIHAAILKS---NQVLDVYVANALVAMHVRFGKMSYAARIFDEL--DEKDNITWNSMIAG 187
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ NG E L+ + ++ + + + + +L A +L GK +H ++ S+
Sbjct: 188 FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN 247
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+ L+DMY+KC VFD+M +DL+SWT +I AY Q EAL L +K Q
Sbjct: 248 LRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQT 307
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+G+ D++ I S A L + A+ VHGY + L DL +QN I+ +YA CGN+
Sbjct: 308 KGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG-LSDLMMQNMIIDVYADCGNINY 366
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A +F+ ++ +D++SW SM++ Y+ NG A+EAL +F M+ + +P+ +T + ++SA
Sbjct: 367 ATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAAS 426
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L + G++ HG+I ++ + N+++DMYA CG L+ A +F I +++ W
Sbjct: 427 LSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVF--ICTRSKSLVLWT 484
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-K 443
+I YGMHG G+ A+E FS M ++ + PDHITF ++L ACSH+GLI+EG++ M K
Sbjct: 485 TMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCK 544
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
++P +HYAC+VD+LGRA L EA+ +K M + P VW A L ACRIH GEI
Sbjct: 545 YQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEI 604
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
AA L L+P+ G +VL+SN++AAS +W++V ++R MK GLKK S IE G +
Sbjct: 605 AAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVH 664
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEI-KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D+ +P ++Y+K+ + ++ K GY+P LH+V E++ ML HSE+LA
Sbjct: 665 TFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLA 724
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+A+G+M+ + +++TKNLRVC DCH+ + +S + R++IVRDA+RFHHFE G CSC
Sbjct: 725 IAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCG 784
Query: 678 DYW 680
D+W
Sbjct: 785 DFW 787
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/723 (35%), Positives = 403/723 (55%), Gaps = 62/723 (8%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ K+C ++S+R H+ +G ++ +G ++ Y+ G + AR +F+ +
Sbjct: 133 VFKACGEISSVRCGDSSHALSRVTGFMSNVF-VGNALVAMYSRCGSLSDARKVFDEMPVW 191
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLILEGK 130
S WN++I +YA G LE++S M G + T VL CAS GK
Sbjct: 192 DVVS--WNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGK 249
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
HG + + + + +V LVDMYAK G D+ VF M V+D+VSW M+ Y Q
Sbjct: 250 QFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIG 309
Query: 191 KPEEALILFQKTQQE-----------------------------------GLLSDSVTIV 215
+ E+A+ LF++ Q+E G+ + VT++
Sbjct: 310 RFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 216 SVASAVGQLGDVLKAQAVHGYAIC-------NAFLEDLCIQNSIVAMYARCGNVEKARLV 268
SV S +G ++ + +H YAI N ++ + N ++ MYA+C V+ AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAM 429
Query: 269 FDMM--EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC--KPNPVTALILVSACTY 324
FD + ++RD+++W M+ GY Q+G A++AL L EM DC +PN T + AC
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 325 LGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + +G++ H Y + N + + N ++DMYAKCGD+ A +F+++ E+N +W
Sbjct: 490 LAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM--MEKNEVTW 547
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-T 442
L+ GYGMHG+G +AL F +M G K D +T +L ACSH+G+ID+G + F M T
Sbjct: 548 TSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI---- 498
V P +HYAC+VD+LGRAG L A +I++MP+ P VW ALL CRIHG++
Sbjct: 608 DFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGE 667
Query: 499 -AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA + +L + G + L+SN+YA + +W++V ++R M++KG+KK S +E K
Sbjct: 668 YAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGT 727
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D+ +P+ KE+Y+ + IK GY+P+ ALHDV+DE+++ +L HSEKLA
Sbjct: 728 TTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLA 787
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+A+GI+ A +++TKNLRVC DCH+AF ++S I +II+RD++RFHHF+ G CSC
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCK 847
Query: 678 DYW 680
YW
Sbjct: 848 GYW 850
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 269/529 (50%), Gaps = 51/529 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
+ C ++ ++ IH L + G++ L+L + +I Y + G + A SL +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILT--LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAG 91
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+ WN++IR+Y NNG + L + M + ++YTFPFV KAC S + G H
Sbjct: 92 VYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHA 151
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
TGF+S+ +V ALV MY++CG D KVFDEM V D+VSW +I +Y + KP+
Sbjct: 152 LSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKM 211
Query: 195 ALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
AL +F K E G D +T+V+V +G + HG+A+ + ++++ + N +V
Sbjct: 212 ALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLV 271
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ--------- 304
MYA+ G +++A VF M +D++SWN+M+ GY Q G+ +A+ LF++MQ
Sbjct: 272 DMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVV 331
Query: 305 --------------------------NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+S KPN VT + ++S C +G+ G++ H Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 339 INSNMKI-------DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
I M + + + N ++DMYAKC +D A MF+ + P ER+V +W V+I GY
Sbjct: 392 IKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 392 MHGHGRKALEFFSQMLEEG--VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
HG KALE S+M EE +P+ T + L AC+ + G++ A + + +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALR-NQQNA 510
Query: 450 VKHYA--CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
V + C++DM + G + +A + M + N+ W +L+ +HG
Sbjct: 511 VPLFVSNCLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMHG 558
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/666 (36%), Positives = 378/666 (56%), Gaps = 17/666 (2%)
Query: 23 ASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMI 82
A+LR +H+ SG + + + Y T N AR +F+++ + + LWNT++
Sbjct: 140 AALRPLHALAVASGFAADNF-VASALAKLYFTLSRGNDARKVFDAVPSPDT--VLWNTLL 196
Query: 83 RAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
+ + E LE + M +G + +S T VL A A + G+ VH + G
Sbjct: 197 AGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGL 252
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+V L+ +YAKCG + +FD M DLV++ +I+ Y ++ LF++
Sbjct: 253 AQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKE 312
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
GL S T+V++ G A +H + + + + ++ +Y R +
Sbjct: 313 LVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFND 372
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
++ AR FD M ++ + SWN+M++GY QNG A+ LF +MQ + +PNP+T +SA
Sbjct: 373 MDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSA 432
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C LG+ LG+ H I N ++++ + A++DMY KCG + A +F+ + +NV
Sbjct: 433 CAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSM--DNKNVV 490
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SWNV+I+GYG+HG G +AL+ + M++ + P TF S+L ACSH GL+ EG F M
Sbjct: 491 SWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSM 550
Query: 442 TK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP-NDSVWGALLLACRIH---- 495
T + P ++H CMVD+LGRAG L EAF++I + P +WGALL AC +H
Sbjct: 551 TSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGD 610
Query: 496 -GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
++A+ LF+LEPE+TGY+VL+SN+Y + ++ E +R++ K++ L K ++IE G
Sbjct: 611 LAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIG 670
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
F DR +P +Y +E + ++ AGY PD AL+DVE+E++EHM+ HSE
Sbjct: 671 DRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSE 730
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+AFG++N P +++ KNLRVC DCH+A + IS + +R I+VRDA+RFHHF G C
Sbjct: 731 KLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVC 790
Query: 675 SCNDYW 680
SC DYW
Sbjct: 791 SCGDYW 796
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/664 (36%), Positives = 390/664 (58%), Gaps = 15/664 (2%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTT-YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
I L +G + +G +I + G+ +A +F+ + + + W MI +
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVT--WTLMITRFQ 121
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
G + ++L+ M SG + +T V+ ACA L+ G+ H ++++G D
Sbjct: 122 QLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC 181
Query: 147 VQAALVDMYAKC---GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE-EALILFQKT 202
V +LVDMYAKC G DD KVFD M V +++SWT +IT Y Q+ + EA+ LF +
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
Q + + T SV A L D+ + V+ + C+ NS+++MY+RCGN+
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
E AR FD++ +++L+S+N+++ Y ++ + EA LF+E++ + N T L+S
Sbjct: 302 ENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGA 361
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ +G+ G + H I+ S K + + NA++ MY++CG+++ A +FN++ + NV S
Sbjct: 362 SSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEM--GDGNVIS 419
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM- 441
W +I G+ HG +ALE F +MLE GV P+ +T+ ++LSACSH GLI EG K F M
Sbjct: 420 WTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMK 479
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--- 498
+ + P ++HYAC+VD+LGR+G L EA +++ MP + V L ACR+HG +
Sbjct: 480 VEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLG 539
Query: 499 --AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
AA + + +P ++L+SN++A++ +W EV ++R+ MK + L K A S IE
Sbjct: 540 KHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENK 599
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F+ D +P +E+Y +++ +A++IK GY+P LHDVE+E +E L HSEK+
Sbjct: 600 VHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKI 659
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
AVA+G ++ + ++V KNLRVC DCH+AF++ S + R++I++RDANRFHHF+ GTCSC
Sbjct: 660 AVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSC 719
Query: 677 NDYW 680
NDYW
Sbjct: 720 NDYW 723
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 219/425 (51%), Gaps = 9/425 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W+ +I YANN E + + M G N Y F V +AC++ I GK++ G ++
Sbjct: 10 WSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLL 69
Query: 138 RTG-FLSDSYVQAALVDMYAKC-GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+TG F SD V AL+DM+ K G + KVFD M R++V+WT+MIT ++Q +A
Sbjct: 70 KTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDA 129
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+ LF G + D T+ V SA ++G + + H + + D+C+ S+V M
Sbjct: 130 VDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDM 189
Query: 256 YARC---GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS-EALLLFDEMQNSDCKPN 311
YA+C G+V+ AR VFD M +++SW +++TGY+Q+G EA+ LF EM KPN
Sbjct: 190 YAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPN 249
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T ++ AC L LG + + ++ + + N+++ MY++CG+++ A F+
Sbjct: 250 HFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFD 309
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ E+N+ S+N ++ Y + +A E F+++ G + TF S+LS S G I
Sbjct: 310 VLF--EKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAI 367
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G + + + K K + ++ M R G + AF + +M N W +++
Sbjct: 368 GKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWTSMITG 426
Query: 492 CRIHG 496
HG
Sbjct: 427 FAKHG 431
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
RDLVSW+ +I+ Y EK EA+ F + G + V A ++ + +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 234 HGYAICNAFLE-DLCIQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
G+ + + E D+C+ +++ M+ + G++E A VFD M R++++W M+T + Q G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+ +A+ LF +M S P+ T +VSAC +G LGR+FH ++ S + +D +
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 352 AVMDMYAKC---GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH-GRKALEFFSQML 407
+++DMYAKC G +D A +F+ + NV SW +I GY G R+A+E F +M+
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRM--PVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL- 466
+ VKP+H TF+S+L AC++ I G + +A + K+ + ++ M R G +
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNME 302
Query: 467 --YEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEHTGY--FVLMSNIYA 522
+AFD++ + L +++ A A ++ E A ++E TG F S +
Sbjct: 303 NARKAFDVLFEKNLVSYNTIVNA--YAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360
Query: 523 ASN 525
AS+
Sbjct: 361 ASS 363
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 117/224 (52%), Gaps = 8/224 (3%)
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M KRDL+SW+++++ Y N +A EA+ F +M PN + AC+ + L
Sbjct: 1 MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60
Query: 331 GRKFHGYIINSN-MKIDATLRNAVMDMYAKC-GDLDTAENMFNDIHPSERNVSSWNVLIA 388
G+ G+++ + + D + A++DM+ K GDL++A +F+ + +RNV +W ++I
Sbjct: 61 GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRM--PDRNVVTWTLMIT 118
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
+ G R A++ F M+ G PD T + ++SAC+ GL+ GR+ + K +
Sbjct: 119 RFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDL 178
Query: 449 EVKHYACMVDMLGRA---GCLYEAFDMIKQMPLPPNDSVWGALL 489
+V +VDM + G + +A + +MP+ N W A++
Sbjct: 179 DVCVGCSLVDMYAKCVADGSVDDARKVFDRMPV-HNVMSWTAII 221
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/611 (39%), Positives = 363/611 (59%), Gaps = 12/611 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WNT +R A ++ L LY M R G N++TFPF LK+CA+ SL + G HG I
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE--MSVRDLVSWTVMITAYEQAEKPEEA 195
+ G + + +VQ L+ MY K D+ KVF+E S + V + +++ Y K EA
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
++LF++ +EG+ +SVT++ + A ++ ++H + F D+ + N + M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y +CG+V A+ +FD M + LISWN+M++GY QNG A+ L L+ M + P+PVT
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ ++S+C LG++ +G + I S + L NA+++MYA+CG+L A+ +F+ +
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM-- 314
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
ER + SW +I GYGMHGHG A++ F +M+ G++PD F +LSACSHAGL D+G
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 374
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F M + ++P +HY+CMVD+LGRAG L EA +I+ MP+ P+ +VWGALL AC+I
Sbjct: 375 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H E+A + +LEPE+ GY+VL+SNIY+ +N + V ++R MK K LKK S
Sbjct: 435 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 494
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
+E + F DR + E+Y+ +E + I P+ + ++D +
Sbjct: 495 YVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDN--REESNKDGFTRV 552
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLAVAFG++N T A V + KNLR+C DCH F+ +S I R++ VRDA RFHHF
Sbjct: 553 GVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHF 612
Query: 670 EGGTCSCNDYW 680
G+CSC DYW
Sbjct: 613 RNGSCSCKDYW 623
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 205/428 (47%), Gaps = 9/428 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G F + LKSC L+ Q H +T G + + + +I Y
Sbjct: 40 MLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPF-VQTGLISMYCKGS 98
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+ AR +F + + + +N ++ Y +N C E + L+ M G+ NS T +
Sbjct: 99 LVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGL 158
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ AC S + G +H ++ GF SD V + MY KCG + K+FDEM V+ L
Sbjct: 159 IPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGL 218
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
+SW M++ Y Q L L++ G+ D VT+V V S+ LG V
Sbjct: 219 ISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFK 278
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ F + + N+++ MYARCGN+ KA+ VFD M +R L+SW +++ GY +G A
Sbjct: 279 IQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIA 338
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMD 355
+ LF EM S +P+ + ++SAC++ G G ++ + N ++ + ++D
Sbjct: 339 VQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVD 398
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+ + G L A+ + + P + + + W L+ +H + A F +++E ++P++
Sbjct: 399 LLGRAGRLKEAQTLIESM-PIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LEPEN 455
Query: 416 ITFTSILS 423
I + +LS
Sbjct: 456 IGYYVLLS 463
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/637 (36%), Positives = 371/637 (58%), Gaps = 16/637 (2%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNS 110
Y + AR +F+++ + + LWNT++ + E LE + M +G + +S
Sbjct: 159 YFKLSRGDDARKVFDTVPSPDT--ILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDS 212
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
T L+A A S + G+ VHG ++ G +V L+ +Y+KCG D +FD
Sbjct: 213 TTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDR 272
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M DLV++ +I+ Y E ++ LF++ G +S T+V+V G L A
Sbjct: 273 MDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLA 332
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H + + D + ++ +Y R ++E AR +FD M ++ + SWN+M++GY QN
Sbjct: 333 RCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQN 392
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G A+ LF MQ + +PNP+T +SAC +LG+ LG+ H I ++++ +
Sbjct: 393 GLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVM 452
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++DMYAKCG + A ++F+ + +NV SWN +I+GYG+HG G +AL+ + ML+
Sbjct: 453 TALIDMYAKCGSIAEARSIFDRM--DNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDAR 510
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEA 469
+ P TF S++ ACSH GL+DEG+K F MT + + P ++H CMVD+LGRAG L EA
Sbjct: 511 ILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEA 570
Query: 470 FDMIKQMPLPP-NDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAA 523
++I + P VWGALL AC +H ++A+ LF+L+ E+ GY+VL+SN+Y +
Sbjct: 571 LELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTS 630
Query: 524 SNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE 583
+ E +R++ K + L K ++IE G F D ++P + +Y +E + +
Sbjct: 631 KKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAK 690
Query: 584 IKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
+ AGY P AL+DVE+E++EHM+ HSEKLA+AFG+++ P +++ KNLRVC DC
Sbjct: 691 MIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDC 750
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
H+A +FIS + +R I+VRDA+RFHHF G CSC DYW
Sbjct: 751 HNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 256/693 (36%), Positives = 390/693 (56%), Gaps = 21/693 (3%)
Query: 4 LGPSTEGFYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
LG +T +LK C L + +H GL GA + I Y+ G
Sbjct: 178 LGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNI-YSKCGRMRD 236
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR LF+ + LWN M++ Y G E +L+S RSG+ + ++ +L C
Sbjct: 237 ARLLFDWMRERDV--VLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGC 294
Query: 121 --ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
A + GK VHG +++G SD V +LV+MY+K G +VF++M DL+S
Sbjct: 295 LWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLIS 354
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSD-----SVTIVSVASAVGQLGDVLKAQAV 233
W MI++ Q+ EE++ LF EGL D S+T+ + A A G L + + + +
Sbjct: 355 WNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQI 414
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H +AI F DL + + I+ MY +CG++ A +VF+ + D ++W SM++G + NG
Sbjct: 415 HAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNE 474
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
+AL ++ M+ S P+ T L+ A + + + + GR+ H +I + D + ++
Sbjct: 475 DQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSL 534
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+DMYAKCG+++ A +F ++ RN++ WN ++ G HG+ +A+ F M G++P
Sbjct: 535 VDMYAKCGNIEDAYRLFKKMNV--RNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 592
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
D ++F ILSACSHAGL E + M ++PE++HY+C+VD LGRAG + EA +
Sbjct: 593 DRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKV 652
Query: 473 IKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKW 527
I+ MP + S+ ALL ACRI G++ A LF LEP + +VL+SNIYAA+N+W
Sbjct: 653 IETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRW 712
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+V R+ MK K +KK FS I+ + F DR +P +Y KVE M I+
Sbjct: 713 DDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRED 772
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
GY+PD L DVEDE++E L YHSEKLA+A+G+++ ++V KNLRVC DCH+A
Sbjct: 773 GYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAI 832
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++IS ++ R+I++RDANRFHHF G CSC DYW
Sbjct: 833 KYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 151/510 (29%), Positives = 259/510 (50%), Gaps = 27/510 (5%)
Query: 29 HSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA-- 86
H+ + SG L ++ Y+ G ++AR +F++ + WN ++ AYA
Sbjct: 100 HARIVVSGSAGDHF-LSNNLLTMYSKCGSLSSARQVFDTTPERDLVT--WNAILGAYAAS 156
Query: 87 ---NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS 143
N+G+ E L L+ +R S S+ T VLK C ++ + + VHG I+ G
Sbjct: 157 VDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEW 216
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D +V ALV++Y+KCG+ D +FD M RD+V W +M+ Y Q +EA LF +
Sbjct: 217 DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 276
Query: 204 QEGLLSDSVTIVSVASAVGQLG--DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ GL D ++ + + G D+ + VHG A+ + D+ + NS+V MY++ G
Sbjct: 277 RSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC 336
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN-----PVTAL 316
AR VF+ M+ DLISWNSM++ Q+ E++ LF ++ + KP+ +T
Sbjct: 337 AYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLA 396
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
AC L G++ H + I + D + + ++DMY KCGD+ A +FN I S
Sbjct: 397 TAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYI--S 454
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+ +W +I+G +G+ +AL + +M + V PD TF +++ A S +++GR+
Sbjct: 455 APDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQ 514
Query: 437 CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
A++ KL + +VDM + G + +A+ + K+M + N ++W A+L+ HG
Sbjct: 515 LHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNV-RNIALWNAMLVGLAQHG 573
Query: 497 --EIAANYLFQ------LEPEHTGYFVLMS 518
E A N LF+ +EP+ + ++S
Sbjct: 574 NAEEAVN-LFKSMKSHGIEPDRVSFIGILS 602
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 201/396 (50%), Gaps = 21/396 (5%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L+ S +L GK H I+ +G D ++ L+ MY+KCG +VFD RD
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 176 LVSWTVMITAYEQA-----EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
LV+W ++ AY + +E L LF+ + + +T+ V G + A
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ VHGYAI D+ + ++V +Y++CG + ARL+FD M +RD++ WN ML GY+Q
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR--QLGRKFHGYIINSNMKIDAT 348
G EA LF E S +P+ + ++++ C + G+ +LG++ HG + S + D +
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ N++++MY+K G A +FND+ ++ SWN +I+ +++ F +L
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDM--KHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 380
Query: 409 EGVKPDHITFTSIL-----SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
EG+KPDH T SI AC L+D+G++ A K ++ + ++DM +
Sbjct: 381 EGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC 440
Query: 464 GCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHG 496
G + A F+ I P+D W +++ C +G
Sbjct: 441 GDMVNAGIVFNYIS----APDDVAWTSMISGCVDNG 472
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/622 (37%), Positives = 371/622 (59%), Gaps = 11/622 (1%)
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+FN + + S WN++I ++NG E +EL+ M G +S T VL ACA +
Sbjct: 474 VFNRMPRQDTIS--WNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQS 531
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
G+VVHG ++TG + ++ + AL+DMY+ C ++F M +++VSWT MI
Sbjct: 532 RYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMI 591
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
T+Y +A ++ L Q+ +G+ D + S A + + ++VHGY I N
Sbjct: 592 TSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGME 651
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ L + N+++ MY +C NVE+ARL+FD + +D+ISWN+++ GY +N +E+ LF +M
Sbjct: 652 KLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM 711
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+PN VT ++ A + S + GR+ H Y + D+ NA++DMY KCG L
Sbjct: 712 L-LQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGAL 770
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A +F+ + +++N+ SW ++IAGYGMHG G+ A+ F QM G++PD +F++IL
Sbjct: 771 LVARVLFDRL--TKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILY 828
Query: 424 ACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
AC H+GL EGR+ F M K ++P++KHY C+VD+L R G L EA + I+ MP+ P+
Sbjct: 829 ACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDS 888
Query: 483 SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
S+W +LL CRIH E A+ +F+LEPE+TGY+VL++NIYA + +W V KL+ +
Sbjct: 889 SIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKI 948
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
+GL++ +S IE + F +R +P W + + ++ +A ++ G+ P AL
Sbjct: 949 GGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYAL 1008
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
+D + L HS KLAVAFG++NL ++VTKN +VC+ CH A +FIS + R+
Sbjct: 1009 MGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNRE 1068
Query: 658 IIVRDANRFHHFEGGTCSCNDY 679
II+RD++RFH FEGG CSC Y
Sbjct: 1069 IILRDSSRFHRFEGGRCSCRGY 1090
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 213/427 (49%), Gaps = 13/427 (3%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
LG ++++ Y G+ AR++F+ + + +W +++ AYA G E + L+ M+
Sbjct: 138 LGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQC 197
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
G+S +++ VLK +S + EG+V+HG + + G V AL+ +Y++CG+ +D
Sbjct: 198 CGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMED 257
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
+VFD M RD +SW MI A+ LF K +G SVT++SV A
Sbjct: 258 AARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAG 317
Query: 224 LGDVLKAQAVHGYAICNAFL----------EDLCIQNSIVAMYARCGNVEKARLVFDMM- 272
LG L +AVHGY++ + L +D + + +V MY +CG++ AR VFD M
Sbjct: 318 LGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMS 377
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
K ++ WN ++ GY + G+ E+L LF +M P+ L+ T L + G
Sbjct: 378 SKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGL 437
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
HGYI+ + NA++ YAK + A +FN + P + + SWN +I+G
Sbjct: 438 VAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRM-PRQDTI-SWNSVISGCSS 495
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
+G +A+E F +M +G + D +T S+L AC+ + GR K + E
Sbjct: 496 NGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSL 555
Query: 453 YACMVDM 459
++DM
Sbjct: 556 ANALLDM 562
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 222/453 (49%), Gaps = 5/453 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
LG+K++ Y G+ +AR +F+++ + K +WN ++ YA G E+L L+ M
Sbjct: 352 LGSKLVFMYVKCGDMASARRVFDAM-SSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHE 410
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
GI+ + + +LK S +G V HG I++ GF + V AL+ YAK D
Sbjct: 411 LGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGD 470
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
VF+ M +D +SW +I+ EA+ LF + +G DSVT++SV A Q
Sbjct: 471 AVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQ 530
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ VHGY++ + + + N+++ MY+ C + + +F M +++++SW +M
Sbjct: 531 SRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAM 590
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+T Y++ G + L EM +P+ + A S + G+ HGY I + M
Sbjct: 591 ITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGM 650
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ + NA+M+MY KC +++ A +F+ + + ++V SWN LI GY + ++ F
Sbjct: 651 EKLLPVANALMEMYVKCRNVEEARLIFDRV--TNKDVISWNTLIGGYSRNNFPNESFSLF 708
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
S ML + +P+ +T T IL A + ++ GR+ A + + +VDM +
Sbjct: 709 SDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKC 767
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
G L A + ++ N W ++ +HG
Sbjct: 768 GALLVARVLFDRLT-KKNLISWTIMIAGYGMHG 799
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 11/213 (5%)
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI--- 345
Q G + AL L SD + + ++V C S + ++ H I S+
Sbjct: 78 QAGDLAGALRLL----GSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGG 133
Query: 346 -DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ L ++ Y KCGDL A +F+ + P +V W L++ Y G ++A+ F
Sbjct: 134 KGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFR 193
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
QM GV PD + +L S G + EG + KL + ++ + R G
Sbjct: 194 QMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCG 253
Query: 465 CLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ +A + M P D++ W +++ C +G
Sbjct: 254 RMEDAARVFDSM--HPRDAISWNSMIGGCFSNG 284
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 266/720 (36%), Positives = 403/720 (55%), Gaps = 64/720 (8%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSG----LINQALHLGAKIIIKYT 53
+ +GP++ N + L +Q+H+ + +G N AL + Y
Sbjct: 179 LENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTNNAL------VTMYA 232
Query: 54 TYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTF 113
G A++LF+ + +DK WNT+I + + N E L M +SG+ N T
Sbjct: 233 KLGRVYEAKTLFD-VFDDKDL-VSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTL 290
Query: 114 PFVLKACASNSLILEGKVVHGDII-RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
VL AC+ ++ GK +H ++ + +S+V ALVDMY C Q + G VFD M
Sbjct: 291 ASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMF 350
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQ 231
R + W MI Y + E EA+ LF + E GL +SVT+ SV A + L +
Sbjct: 351 RRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKE 410
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+H + F +D +QN+++ MY+R G +E AR +F M ++D++SWN+M+TGY+ G
Sbjct: 411 GIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCG 470
Query: 292 QASEALLLFDEMQ------------------NSDCKPNPVTALILVSACTYLGSRQLGRK 333
+ +AL L +MQ N KPN VT + ++ C L + G++
Sbjct: 471 RHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKE 530
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
H Y + + D + +A++DMYAKCG L+ + +F + S RNV +WNVLI YGMH
Sbjct: 531 IHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQM--SVRNVITWNVLIMAYGMH 588
Query: 394 GHGRKALEFFSQMLEEG-----VKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVK 447
G G +AL+ F +M+EEG ++P+ +T+ +I ++ SH+G++DEG F M K ++
Sbjct: 589 GKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIE 648
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMP--LPPNDSVWGALLLACRIH-----GEIAA 500
P HYAC+VD+LGR+G + EA+++IK MP + D+ W +LL AC+IH GEIAA
Sbjct: 649 PTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDA-WSSLLGACKIHQNLEIGEIAA 707
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
LF L+P N+ K +G+ MK KG++K S IE+G ++ F
Sbjct: 708 KNLFVLDP----------NVLDYGTKQSMLGR---KMKEKGVRKEPGCSWIEHGDEVHKF 754
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D +P KEV++ +E++++ +K GY+PD SC LH+V +E++E ML HSE+LA+AF
Sbjct: 755 LAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAF 814
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
G++N +P ++V KNLRVCNDCH A +FIS I R+II+RD RFHHF GTCSC DYW
Sbjct: 815 GLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 241/497 (48%), Gaps = 36/497 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGA--KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
+Q+H+ + G QAL ++ Y G+ + AR +F+ I N S WN+MI
Sbjct: 105 KQLHAHVFKFG---QALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVS--WNSMIN 159
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS--NSLILEGKVVHGDIIRTGF 141
A + L+ M + S+T V AC++ N L+L GK VH ++R G
Sbjct: 160 AACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLL-GKQVHAFVLRNGD 218
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
++ ALV MYAK G+ + +FD +DLVSW +I++ Q ++ EEAL+
Sbjct: 219 WR-TFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHV 277
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA-FLEDLCIQNSIVAMYARCG 260
Q G+ + VT+ SV A L + + +H + + N +E+ + ++V MY C
Sbjct: 278 MLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCK 337
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILV 319
EK RLVFD M +R + WN+M+ GY++N EA+ LF EM PN VT ++
Sbjct: 338 QPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVL 397
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC S H ++ + D ++NA+MDMY++ G ++ A ++F + + ++
Sbjct: 398 PACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSM--NRKD 455
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-------------------VKPDHITFTS 420
+ SWN +I GY + G AL M + G +KP+ +T +
Sbjct: 456 IVSWNTMITGYVVCGRHDDALNLLHDM-QRGQAEHRINTFDDYEDNKNFPLKPNSVTLMT 514
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
+L C+ + +G++ A K + +V + +VDM + GCL + + +QM +
Sbjct: 515 VLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSV-R 573
Query: 481 NDSVWGALLLACRIHGE 497
N W L++A +HG+
Sbjct: 574 NVITWNVLIMAYGMHGK 590
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 187/336 (55%), Gaps = 6/336 (1%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
+ + Y+ M +G+ +++ FP VLKA A + GK +H + + G + V +LV
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
+MY KCG D +VFDE++ RD VSW MI A + E+ E A+ LF+ E + S
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 213 TIVSVASAVGQL-GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
T+VSVA A L +L + VH + + N N++V MYA+ G V +A+ +FD+
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTF-TNNALVTMYAKLGRVYEAKTLFDV 246
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ +DL+SWN++++ QN + EALL M S +PN VT ++ AC++L G
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306
Query: 332 RKFHGYIINSNMKIDATLRN-AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
++ H +++ +N I+ + A++DMY C + +F+ + R ++ WN +IAGY
Sbjct: 307 KEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMF--RRTIAVWNAMIAGY 364
Query: 391 GMHGHGRKALEFFSQML-EEGVKPDHITFTSILSAC 425
+ +A+E F +M+ E G+ P+ +T +S+L AC
Sbjct: 365 VRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPAC 400
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/662 (36%), Positives = 377/662 (56%), Gaps = 12/662 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R IH + GL + + + ++ Y+ G A +F ++ S WN+M+ Y
Sbjct: 1068 RGIHGLVVKLGL-DSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS--WNSMMACY 1124
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+G C++ L++ + + + G N TF L AC++ ++E K+VH II GF
Sbjct: 1125 VQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL 1184
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V ALV MY K G + KV M D V+W +I + + E+P EA+ ++ +++
Sbjct: 1185 IVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 1244
Query: 206 GLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G+ ++ +T+VSV A D+LK +H + + F D ++NS++ MYA+CG++
Sbjct: 1245 GIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNS 1304
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
+ +FD + + I+WN+M+ +G EAL +F EM+N + + ++A
Sbjct: 1305 SNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATAN 1364
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L + G++ HG +I + D + NA MDMY KCG++ M P R+ SWN
Sbjct: 1365 LAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLP--QPINRSRLSWN 1422
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
+LI+ + HG +KA E F +ML+ G KPDH+TF S+LSAC+H GL+DEG + MT+
Sbjct: 1423 ILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 1482
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI----- 498
V P ++H C++D+LGR+G L A IK+MP+PPND W +LL ACRIHG +
Sbjct: 1483 FGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARK 1542
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
A +L +L+P +VL SN+ A S KW +V LR++M + +KK A S ++ +
Sbjct: 1543 TAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVH 1602
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F ++ +P + K+ + K AGY+PD S ALHD+++E +E+ L HSE+LA+
Sbjct: 1603 SFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLAL 1662
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AFG++N + +++ KNLRVC DCHS ++F+S I RKI++RD RFHHF GG CSC D
Sbjct: 1663 AFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGD 1722
Query: 679 YW 680
YW
Sbjct: 1723 YW 1724
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/563 (33%), Positives = 315/563 (55%), Gaps = 18/563 (3%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
RL PS Y ++L+ C + +Q IH+ L T+G LHL K+II Y G+
Sbjct: 27 RLDPS---LYLKILQLCIDKKAKKQGHLIHTHLITNGF-GSDLHLNTKLIIFYVKVGDVI 82
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
AR++F+ + S W M+ Y+ NG + L+S MR G+ +N +T+ L+A
Sbjct: 83 AARNVFDGMPERSVVS--WTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRA 140
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
C S + G V G I + F+ + +V++ALVD ++KCG+ +D +F M RD+VSW
Sbjct: 141 CTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSW 200
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
MI Y +++ +F+ + GL+ D T+ SV A + G ++ A +HG
Sbjct: 201 NAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQ 260
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS-EALL 298
+ + ++ YA+ G++ A+ + M K+DL S +++TGY G S +AL
Sbjct: 261 LGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALD 320
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
LF EM + + V +++ C L S LG + H + + D + NA++DMYA
Sbjct: 321 LFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYA 380
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
K G+++ A+ F+++ E+NV SW LI+GY HG+G A+ + +M +G KP+ +TF
Sbjct: 381 KSGEIEDAKRAFDEM--EEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTF 438
Query: 419 TSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
S+L ACSH GL EG +CF +M K ++KP +HY+CMVD+ R G L EA++++ ++
Sbjct: 439 LSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKID 498
Query: 478 LPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ N S+WGA+L A I+G + AA+ LF ++PE++ +V++++IY+A+ W + K
Sbjct: 499 IKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWK 558
Query: 533 LREDMKNKGLKKPAAFSVIEYGK 555
+R+ M+ + KK A +S + K
Sbjct: 559 IRKLMEERSTKKNAGYSFFQATK 581
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 238/455 (52%), Gaps = 6/455 (1%)
Query: 36 GLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETL 95
G +N + +I Y+ +G AR +F+ + + S W+TM+ Y G E +
Sbjct: 773 GSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEAS--WSTMLSGYVRVGLYEEAV 830
Query: 96 ELYSTMRRSGISSNSYTFPFVLKACA-SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
L+ M G+ N + ++ AC+ S + EG VHG +++TG L D YV ALV
Sbjct: 831 GLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHF 890
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
Y G + K+F+EM ++VSWT ++ Y + P E L ++Q+ +QEG+ + T
Sbjct: 891 YGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTF 950
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
+V S+ G L D + V G+ I F + + + NS+++M++ +VE+A VFD M +
Sbjct: 951 ATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNE 1010
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
D+ISWN+M++ Y +G E+L F M++ + N T L+S C+ + + + GR
Sbjct: 1011 CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI 1070
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
HG ++ + + + N ++ +Y++ G + AE +F + +ER++ SWN ++A Y G
Sbjct: 1071 HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAM--TERDLISWNSMMACYVQDG 1128
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
L+ +++L+ G +H+TF S L+ACS+ + E + A + +
Sbjct: 1129 KCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGN 1188
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+V M G+ G + EA +++ MP P+ W AL+
Sbjct: 1189 ALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALI 1222
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 240/451 (53%), Gaps = 15/451 (3%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN MI AYA++G C E+L + MR +NS T +L C+S + G+ +HG ++
Sbjct: 1016 WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 1075
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ G S+ + L+ +Y++ G+++D VF M+ RDL+SW M+ Y Q K + L
Sbjct: 1076 KLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLK 1135
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
+ + Q G + + VT S +A +++++ VH I F + L + N++V MY
Sbjct: 1136 ILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYG 1195
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+ G + +A+ V M + D ++WN+++ G+ +N + +EA+ + ++ N +T +
Sbjct: 1196 KLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS 1255
Query: 318 LVSACTYLGS-RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC+ + G H +I+ + + D ++N+++ MYAKCGDL+++ +F+ +
Sbjct: 1256 VLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGL--G 1313
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
++ +WN ++A HG G +AL+ F +M GV D +F+ L+A ++ +++EG++
Sbjct: 1314 NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ 1373
Query: 437 CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS--VWGALLLACRI 494
+ KL + ++ +DM G+ G E D++K +P P N S W L+ A
Sbjct: 1374 LHGLVIKLGFESDLHVTNAAMDMYGKCG---EMHDVLKMLPQPINRSRLSWNILISAFAR 1430
Query: 495 HG--EIAANYLFQL-----EPEHTGYFVLMS 518
HG + A ++ +P+H + L+S
Sbjct: 1431 HGCFQKARETFHEMLKLGPKPDHVTFVSLLS 1461
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 192/416 (46%), Gaps = 7/416 (1%)
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I++ N G E L+L S+ + + + +L+ C +G ++H +I GF
Sbjct: 5 IQSACNLGRLAEALKLLSS---NPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGF 61
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
SD ++ L+ Y K G VFD M R +VSWT M++ Y Q + E+A +LF
Sbjct: 62 GSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSD 121
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G+ ++ T S A L + V G F+E+L +++++V +++CG
Sbjct: 122 MRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGK 181
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+E A +F M +RD++SWN+M+ GY G A ++ +F M P+ T ++ A
Sbjct: 182 MEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRA 241
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
G + + HG I + +++ YAK G L +A+++ + ++++
Sbjct: 242 SAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM--LKKDLF 299
Query: 382 SWNVLIAGYGMHG-HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
S LI GY G + AL+ F +M + + D + S+L+ C++ G + A
Sbjct: 300 SSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAF 359
Query: 441 MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
K +V ++DM ++G + +A +M N W +L+ HG
Sbjct: 360 ALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEME-EKNVISWTSLISGYAKHG 414
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 138/276 (50%), Gaps = 16/276 (5%)
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ +A+H + I + + N+++ MY++ GN+E AR VFD M R+ SW++ML+GY
Sbjct: 761 MAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGY 820
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG-SRQLGRKFHGYIINSNMKID 346
++ G EA+ LF +M +PN L++AC+ G G + HG+++ + + D
Sbjct: 821 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 880
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ A++ Y G + A+ +F ++ + NV SW L+ GY G+ + L + +M
Sbjct: 881 VYVGTALVHFYGSIGLVYNAQKLFEEM--PDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM 938
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDE---GRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
+EGV + TF ++ S+C GL+++ G + + + + V ++ M
Sbjct: 939 RQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSF 995
Query: 464 GCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHG 496
+ EA FD + + + W A++ A HG
Sbjct: 996 SSVEEACYVFDHMNECDIIS----WNAMISAYAHHG 1027
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
S+ G+ H + I ++ + N +++MY+K G+++ A +F+++ RN +SW+ +
Sbjct: 759 SQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMR--HRNEASWSTM 816
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG-LIDEGRKCFADMTKLS 445
++GY G +A+ F QM GV+P+ S+++ACS +G + DEG + + K
Sbjct: 817 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 876
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ +V +V G G +Y A + ++MP N W +L++
Sbjct: 877 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVG 921
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/595 (38%), Positives = 355/595 (59%), Gaps = 9/595 (1%)
Query: 92 VETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAAL 151
V L S M G S+ + + + AC + EG+ VH +I + ++ L
Sbjct: 24 VAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRL 83
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
V MY +CG DD V D M R +VSWT MI+ Y Q E+ EAL LF K + G + +
Sbjct: 84 VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNE 143
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
T+ +V ++ + + + VH + F + + +S++ MYA+ N+++AR VFD
Sbjct: 144 YTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDT 203
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ +RD++S ++++GY Q G EAL LF ++ + + N VT LV+A + L S G
Sbjct: 204 LPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYG 263
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ H I+ + L+N+++DMY+KCG L + +F+++ ER+V SWN ++ GYG
Sbjct: 264 KQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNM--LERSVVSWNAMLMGYG 321
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEV 450
HG G + + F + +E VKPD +T ++LS CSH GL+DEG F + K S
Sbjct: 322 RHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHT 380
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
HY C++D+LGR+G L +A ++I+ MP S+WG+LL ACR+H GE+ A L +
Sbjct: 381 GHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLE 440
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
+EPE+ G +V++SNIYAA+ W++V K+R+ M K + K S I K I FH+++R
Sbjct: 441 MEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSER 500
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P K++ K++ + V+IK AG++PDLSC LHDV+DE +E ML HSEKLA+ FG+MN
Sbjct: 501 FHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNT 560
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P ++V KNLR+C DCH+ +F+S +Y R+I +RD NRFH G C+C DYW
Sbjct: 561 PPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 209/399 (52%), Gaps = 8/399 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H+ + T+ A+ LG +++ Y G + AR++ + + S W TMI Y
Sbjct: 62 RQVHARMITARY-RPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVS--WTTMISGY 118
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ VE L+L+ M R+G N YT VL +C+ I +GK VH +++T F S
Sbjct: 119 SQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHM 178
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V ++L+DMYAK + +VFD + RD+VS T +I+ Y Q EEAL LF++ E
Sbjct: 179 FVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSE 238
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + VT ++ +A+ L + + VH + + +QNS++ MY++CG + +
Sbjct: 239 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYS 298
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VFD M +R ++SWN+ML GY ++G E + LF ++ + KP+ VT L ++S C++
Sbjct: 299 RRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHG 357
Query: 326 GSRQLGRKFHGYIINSNMKIDATLR-NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
G G ++ + T ++D+ + G L+ A N+ ++ P E S W
Sbjct: 358 GLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM-PFESTPSIWG 416
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
L+ +H + E +Q L E ++P++ ILS
Sbjct: 417 SLLGACRVHANVHVG-ELVAQKLLE-MEPENAGNYVILS 453
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/700 (35%), Positives = 403/700 (57%), Gaps = 46/700 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTT-YGEPNTARSLFNSIHNDKS 73
LL++CN + + QIHS +GL + L L II T G+ AR +F+ I +
Sbjct: 41 LLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEI--PQP 98
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F+WNTMI+ Y+ + LY M I + +TFPF+LK + + GKV+
Sbjct: 99 SVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLL 158
Query: 134 GDIIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
+ GFL S+ +VQ + +++ CG + K+FD ++V+W V+++ Y + ++
Sbjct: 159 NHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRY 218
Query: 193 EEALILFQKTQQ--EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQ 249
EE+ LF + ++ E + +SVT+V + SA +L D++ + ++ I +E +L ++
Sbjct: 219 EESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILE 278
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG----------------------- 286
N+++ M+A CG ++ AR VFD M+ RD+ISW S++TG
Sbjct: 279 NALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYV 338
Query: 287 --------YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
Y++ + E L LF +MQ S+ KP+ T + +++AC +LG+ +LG YI
Sbjct: 339 SWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYI 398
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ +K D + NA++DMY KCG+++ A+ +FN++ ++ +W +I G +GHG +
Sbjct: 399 DKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDK--FTWTAMIVGLANNGHGEE 456
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMV 457
AL FS MLE V PD IT+ ++ AC+H GL+ +G+ F++M + +KP + HY CMV
Sbjct: 457 ALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMV 516
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTG 512
D+LGRAG L EA ++I MP+ PN VWG+LL ACR+H E+AAN + +LEPE+
Sbjct: 517 DLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGA 576
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
+VL+ NIYAA KW+ + +R+ M +G+KK S++E + F D+ +P KE
Sbjct: 577 VYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKE 636
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+Y K+E+M ++ AGY PD S DV +ED+E L HSEKLA+A+ +++ ++
Sbjct: 637 IYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIR 696
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
+ KNLR+C DCH +S +Y R++IVRD RFHHF G
Sbjct: 697 IVKNLRMCVDCHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/723 (35%), Positives = 403/723 (55%), Gaps = 62/723 (8%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ K+C ++S+R H+ +G I+ +G ++ Y+ + AR +F+ +
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVF-VGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLILEGK 130
S WN++I +YA G LE++S M G ++ T VL CAS GK
Sbjct: 192 DVVS--WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+H + + + + +V LVDMYAKCG D+ VF MSV+D+VSW M+ Y Q
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 191 KPEEALILFQKTQQE-----------------------------------GLLSDSVTIV 215
+ E+A+ LF+K Q+E G+ + VT++
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 216 SVASAVGQLGDVLKAQAVHGYAIC-------NAFLEDLCIQNSIVAMYARCGNVEKARLV 268
SV S +G ++ + +H YAI N ++ + N ++ MYA+C V+ AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 269 FDMM--EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC--KPNPVTALILVSACTY 324
FD + ++RD+++W M+ GY Q+G A++AL L EM DC +PN T + AC
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 325 LGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + ++G++ H Y + N + + N ++DMYAKCG + A +F+++ +N +W
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM--MAKNEVTW 547
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-T 442
L+ GYGMHG+G +AL F +M G K D +T +L ACSH+G+ID+G + F M T
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI---- 498
V P +HYAC+VD+LGRAG L A +I++MP+ P VW A L CRIHG++
Sbjct: 608 VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGE 667
Query: 499 -AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA + +L H G + L+SN+YA + +W++V ++R M++KG+KK S +E K
Sbjct: 668 YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT 727
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D+ +P+ KE+Y+ + IK GY+P+ ALHDV+DE+++ +L HSEKLA
Sbjct: 728 TTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLA 787
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+A+GI+ A +++TKNLRVC DCH+AF ++S I II+RD++RFHHF+ G+CSC
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCK 847
Query: 678 DYW 680
YW
Sbjct: 848 GYW 850
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 275/529 (51%), Gaps = 51/529 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
+ C ++ ++ IH L + G++ L+L + +I Y + G + A SL +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILT--LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAG 91
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+ WN++IR+Y +NG + L L+ M + ++YTFPFV KAC S + G+ H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+ TGF+S+ +V ALV MY++C D KVFDEMSV D+VSW +I +Y + KP+
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 195 ALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
AL +F + E G D++T+V+V LG + +H +A+ + ++++ + N +V
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ--------- 304
MYA+CG +++A VF M +D++SWN+M+ GY Q G+ +A+ LF++MQ
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 305 --------------------------NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+S KPN VT + ++S C +G+ G++ H Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 339 INSNMKI-------DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
I + + + + N ++DMYAKC +DTA MF+ + P ER+V +W V+I GY
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 392 MHGHGRKALEFFSQMLEEG--VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
HG KALE S+M EE +P+ T + L AC+ + G++ A + + +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR-NQQNA 510
Query: 450 VKHYA--CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
V + C++DM + G + +A + M + N+ W +L+ +HG
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/611 (37%), Positives = 367/611 (60%), Gaps = 11/611 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN+++ ++ N+G ++ L + +M R+G S N TF L AC S +G+++HG ++
Sbjct: 431 WNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVV 490
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+G + + ALV MY K G +V +M RD+V+W +I Y + E P++AL
Sbjct: 491 VSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALA 550
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVL-KAQAVHGYAICNAFLEDLCIQNSIVAMY 256
FQ + EG+ ++ +T+VSV SA GD+L + + +H Y + F D ++NS++ MY
Sbjct: 551 AFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 610
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+CG++ ++ +F+ ++ R +I+WN++L +G E L L +M++ + +
Sbjct: 611 AKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFS 670
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
+SA L + G++ HG + ++D + NA DMY+KCG++ M + PS
Sbjct: 671 EGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKM---LPPS 727
Query: 377 -ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
R++ SWN+LI+ G HG+ + E F +MLE G+KP H+TF S+L+ACSH GL+D+G
Sbjct: 728 VNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGL 787
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ + K ++P ++H C++D+LGR+G L EA I +MP+ PND VW +LL +C+I
Sbjct: 788 AYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI 847
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H G AA L +LEPE FVL SN++A + +W +V +R+ M K +KK A S
Sbjct: 848 HRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACS 907
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
++ + F DR +P E+Y K+E + IK +GY+ D S AL D ++E +EH L
Sbjct: 908 WVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNL 967
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSE+LA+A+ +M+ + V++ KNLR+C+DCHS ++F+S + R+I++RD RFHHF
Sbjct: 968 WNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHF 1027
Query: 670 EGGTCSCNDYW 680
E G CSC DYW
Sbjct: 1028 ESGLCSCKDYW 1038
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 234/468 (50%), Gaps = 13/468 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS--IHNDKSYSFLWNTMIR 83
R +H+ L GL+ ++ +I YT +G AR LF+ + N+ S WNTM+
Sbjct: 78 RALHA-LCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVS----WNTMMS 132
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA-SNSLILEGKVVHGDIIRTGFL 142
G +E +E + M GI +S+ ++ AC S S+ EG VHG + ++G L
Sbjct: 133 GIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLL 192
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
SD YV A++ +Y G KVF+EM R++VSWT ++ Y +PEE + +++
Sbjct: 193 SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSM 252
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+ EG+ + ++ V S+ G L D + + G I + L ++NS+++M+ GNV
Sbjct: 253 RGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNV 312
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
+ A +F+ + +RD ISWNS++ Y QNG E+ +F+ M+ + N T L+S
Sbjct: 313 DYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVL 372
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ ++ GR HG ++ + N ++ MYA G + A+ +F + P+ +++ S
Sbjct: 373 GDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQM-PT-KDLIS 430
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
WN L+A + G AL M+ G +++TFTS L+AC D+GR +
Sbjct: 431 WNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVV 490
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
+ +V M G+ G + + ++ QM P D V W AL+
Sbjct: 491 VSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQM--PRRDVVAWNALI 536
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/750 (34%), Positives = 416/750 (55%), Gaps = 73/750 (9%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G + F LK+C L S R +H + +G + A ++ Y+ G
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNA-LVAMYSRCG 198
Query: 57 EPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTM------RRSGISSN 109
A +F+ I + WN+++ A+ + LEL+S M + + S+
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSD 258
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD 169
+ +L ACAS + + K +H IR G +D++V AL+D YAKCG +D KVF+
Sbjct: 259 IISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFN 318
Query: 170 EMSVRDLVSWTVMITAYEQAEK-----------------------------------PEE 194
M +D+VSW M+T Y Q+ +E
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQE 378
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE---------- 244
AL FQ+ +G +SVTI+S+ SA LG + + +H Y++ L
Sbjct: 379 ALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGD 438
Query: 245 --DLCIQNSIVAMYARCGNVEKARLVFDMMEKRD--LISWNSMLTGYIQNGQASEALLLF 300
DL + N+++ MY++C + + AR +FD + +R+ +++W M+ GY Q G +++AL +F
Sbjct: 439 GEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIF 498
Query: 301 DEMQNSD--CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT--LRNAVMDM 356
EM + PN T ++ AC +L + ++G++ H Y+ + + + N ++DM
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDM 558
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y+KCGD+DTA N+F+ + +RN SW +++GYGMHG G++AL+ F +M + G PD I
Sbjct: 559 YSKCGDVDTARNVFDSM--PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI 616
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
+F +L ACSH+G++D+G F M + V +HYAC++D+L R G L +A+ I++
Sbjct: 617 SFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQE 676
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ P+ +W ALL ACR+H E A N L ++ E+ G + L+SNIYA + +W++V
Sbjct: 677 MPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDV 736
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
++R+ MK G+KK S ++ K F DR +P E+Y +E + IK+ GY+
Sbjct: 737 ARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYV 796
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P+ + ALHDV+DE++ ++L+ HSEKLA+A+G++ +P +++TKNLRVC DCHSAF +I
Sbjct: 797 PETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYI 856
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S I +IIVRD++RFHHF+ G+CSC YW
Sbjct: 857 SKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/567 (28%), Positives = 267/567 (47%), Gaps = 86/567 (15%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQAL-------------------HLGAKIIIKY 52
+ LLK C + ++RQIH + GL++ LG ++ Y
Sbjct: 34 FASLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSLGTGVVASY 93
Query: 53 TTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYT 112
G A S+ + S + WN ++R + GH + + M R+G + +T
Sbjct: 94 LACGATKDALSVLERV--TPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFT 151
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
P+ LKAC G+ +HG I GF S+ +V ALV MY++CG +D VFDE++
Sbjct: 152 LPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEIT 211
Query: 173 ---VRDLVSWTVMITAYEQAEKPEEALILF--------QKTQQEGLLSDSVTIVSVASAV 221
+ D++SW ++ A+ + P AL LF +K E SD ++IV++ A
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNE--RSDIISIVNILPAC 269
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L + + + +H YAI N D + N+++ YA+CG++ A VF++ME +D++SWN
Sbjct: 270 ASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWN 329
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSD---------------------------------- 307
+M+TGY Q+G A LF+ M+ +
Sbjct: 330 AMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILD 389
Query: 308 -CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM------------KIDATLRNAVM 354
+PN VT + L+SAC LG+ G + H Y + + D + NA++
Sbjct: 390 GSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALI 449
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE--GVK 412
DMY+KC A ++F+ I ERNV +W V+I GY +G AL+ FS+M+ + V
Sbjct: 450 DMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVA 509
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYA-CMVDMLGRAGCLYEAF 470
P+ T + IL AC+H + G++ A +T+ +P V A C++DM + G + A
Sbjct: 510 PNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTAR 569
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHGE 497
++ MP N+ W +++ +HG
Sbjct: 570 NVFDSMP-KRNEVSWTSMMSGYGMHGR 595
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/642 (38%), Positives = 382/642 (59%), Gaps = 33/642 (5%)
Query: 47 KIIIKYTTYGE-PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG 105
KI+++ G+ P +A LF+ + + S WN+MI Y +NG L +Y M G
Sbjct: 189 KIMVEKGIEGKRPESASELFDKLCDRDVIS--WNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
I + T VL CA++ + GK VH I++ F L+DMY+KCG D
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+VF++M R++VSWT MI Y + + A+IL Q+ ++EG+ D V I S+ A + G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + VH Y N +L + N+++ MYA+CG++E A VF M +D+ISWN+M+
Sbjct: 367 SLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV- 425
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+ KP+ T ++ AC L + + G++ HGYI+ +
Sbjct: 426 --------------------GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSS 465
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + NA++D+Y KCG L A +F D+ PS +++ SW V+IAGYGMHG+G +A+ F++
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLF-DMIPS-KDLVSWTVMIAGYGMHGYGNEAIATFNE 523
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M + G++PD ++F SIL ACSH+GL+++G + F M +++P+++HYACMVD+L R G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSN 519
L +A+ I+ +P+ P+ ++WGALL CRI+ +I A +F+LEPE+TGY+VL++N
Sbjct: 584 NLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLAN 643
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN-PYWKEVYKKVE 578
IYA + K EV ++RE + KGL+K S IE + F + + + P+ K++ ++
Sbjct: 644 IYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLK 703
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
M ++K GY P AL + ++ +E L HSEKLA+AFG++ L P ++VTKNLR
Sbjct: 704 KMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 763
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH +F+S RR+I++RD+NRFHHF+ G CSC +W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 204/474 (43%), Gaps = 85/474 (17%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
+N I + G +EL ++S + + +Y VL+ CA + +GK VH I
Sbjct: 69 YNAKILHFCQLGDLENAMELVCMCQKSELETKTYGS--VLQLCAGLKSLTDGKKVHSIIK 126
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV------------------------ 173
D + LV YA CG +G +VFD M
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 174 ---------------------------RDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
RD++SW MI+ Y E L ++++ G
Sbjct: 187 LFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ D TI+SV G + +AVH AI ++F + N+++ MY++CG+++ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VF+ M +R+++SW SM+ GY ++G + A++L +M+ K + V ++ AC G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
S G+ H YI +NM + + NA+MDMYAKCG ++ A ++F+ + +++ SWN +
Sbjct: 367 SLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM--VVKDIISWNTM 424
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
+ +KPD T IL AC+ ++ G++ + +
Sbjct: 425 VG---------------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGY 463
Query: 447 KPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ +VD+ + G L A FDMI P D V W ++ +HG
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMI-----PSKDLVSWTVMIAGYGMHG 512
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/723 (36%), Positives = 400/723 (55%), Gaps = 65/723 (8%)
Query: 17 KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
K C +L Q+H+ L +GL ++ K+I Y G +++ +F++ K SF
Sbjct: 356 KRCATSTTLTQLHAHLFITGL-HRHPPASTKLIESYAQIGIFESSKRVFDTF--PKPDSF 412
Query: 77 LWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKAC--------------A 121
+W +I+ Y G E + LY M + +++ FP VLKAC A
Sbjct: 413 MWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQA 472
Query: 122 SNSL--------------------------------------ILEGKVVHGDIIRTGFLS 143
S L + EG+ VHG +IR
Sbjct: 473 SEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDP 532
Query: 144 D-SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
+ ++ AL+++YA G D KVF+ + + ++SW +I+ + + +PEEAL+LF +
Sbjct: 533 ELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQM 592
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
Q +GL+ DS ++ S SA G + +HGY I D +QN+++ MYA+CG V
Sbjct: 593 QTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFV 651
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
A +F+ ++++ L++WNSM+ G+ QNG + EA+ LFD+M + K + +T L ++ AC
Sbjct: 652 HSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQAC 711
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
++LG + G+ H +I ++ D+ L A+ DMY+KCG+L A +F+ + SER++ S
Sbjct: 712 SHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRM--SERSIVS 769
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W+V+IAGYGMHG + F+QML G+KP+ ITF ILSACSHAG ++EG+ F M+
Sbjct: 770 WSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS 829
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI---- 498
+ V+P+ H+ACMVD+L RAG L A+ +I +P P N S+WGALL CRIH I
Sbjct: 830 EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIK 889
Query: 499 -AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
L ++ TGY+ L+SNIYA W + GK+R MK+KGL+K +S IE K I
Sbjct: 890 SIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKI 949
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D + K++Y+ +E+ + Y + ++ ++E+ + HSEKLA
Sbjct: 950 YRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLA 1009
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+AFGI+N P ++++KNLRVC DCHS + S I R+II+RD NRFH F G+CSCN
Sbjct: 1010 IAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCN 1069
Query: 678 DYW 680
DYW
Sbjct: 1070 DYW 1072
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/635 (38%), Positives = 379/635 (59%), Gaps = 32/635 (5%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C + +IH G + +++ A +I Y+ Y AR LF+ +
Sbjct: 89 FPSVLKACRTVIDGNKIHCLALKFGFM-WDVYVAASLIHLYSRYKAVGNARILFDEMPVR 147
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y +G+ E L L + +R + +S T +L AC G
Sbjct: 148 DMGS--WNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVT 201
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ G S+ D KVFD M VRDL+SW +I AYE E+
Sbjct: 202 IHSYSIKHGLESE---------------LLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 246
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA-FLEDLCIQN 250
P A+ LFQ+ + + D +T++S+AS + QLGD+ ++V G+ + FLED+ I N
Sbjct: 247 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 306
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SDCK 309
++V MYA+ G V+ AR VF+ + D+ISWN++++GY QNG ASEA+ +++ M+ +
Sbjct: 307 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 366
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N T + ++ AC+ G+ + G K HG ++ + + +D + ++ DMY KCG L+ A ++
Sbjct: 367 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 426
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F I N WN LIA +G HGHG KA+ F +ML+EGVKPDHITF ++LSACSH+G
Sbjct: 427 FYQI--PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 484
Query: 430 LIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+DEG+ CF M T + P +KHY CMVDM GRAG L A IK M L P+ S+WGAL
Sbjct: 485 LVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGAL 544
Query: 489 LLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L ACR+HG +IA+ +LF++EPEH GY VL+SN+YA++ KW V ++R KGL+
Sbjct: 545 LSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLR 604
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K +S +E ++ F+T ++ +P ++E+Y+++ ++ ++KM GY+PD L DVED+
Sbjct: 605 KTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDD 664
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
++EH+L HSE+LA+AF ++ + +++ KNLR
Sbjct: 665 EKEHILMSHSERLAIAFALIATPAKTTIRIFKNLR 699
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 248/475 (52%), Gaps = 44/475 (9%)
Query: 58 PNTAR-SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYST-MRRSGISSNSYTFPF 115
PN ++ F+ I N Y+ WN MI Y G+ E + +S M SG++ + TFP
Sbjct: 34 PNKSKMHTFDHIQNRDVYA--WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPS 91
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
VLKAC + +++G +H ++ GF+ D YV A+L+ +Y++ + +FDEM VRD
Sbjct: 92 VLKACRT---VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 148
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVH 234
+ SW MI+ Y Q+ +EAL L GL + DSVT+VS+ SA + GD + +H
Sbjct: 149 MGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 203
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
Y+I + +L + + VFD M RDLISWNS++ Y N Q
Sbjct: 204 SYSIKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 248
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI-DATLRNAV 353
A+ LF EM+ S +P+ +T + L S + LG + R G+ + + D T+ NAV
Sbjct: 249 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 308
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VK 412
+ MYAK G +D+A +FN + +V SWN +I+GY +G +A+E ++ M EEG +
Sbjct: 309 VVMYAKLGLVDSARAVFNWL--PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 366
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
+ T+ S+L ACS AG + +G K + K + +V + DM G+ G L +A +
Sbjct: 367 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 426
Query: 473 IKQMPLPPNDSVWGALLLAC---RIHGEIAANYLFQ------LEPEHTGYFVLMS 518
Q+P N W L+AC HGE A LF+ ++P+H + L+S
Sbjct: 427 FYQIPR-VNSVPWNT-LIACHGFHGHGEKAV-MLFKEMLDEGVKPDHITFVTLLS 478
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 13/191 (6%)
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE-MQ 304
+C Q ++ + N K FD ++ RD+ +WN M++GY + G +SE + F M
Sbjct: 20 ICNQPNVSTHVSLSPNKSKMH-TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFML 78
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+S P+ T ++ AC + G K H + D + +++ +Y++ +
Sbjct: 79 SSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 135
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP-DHITFTSILS 423
A +F+++ R++ SWN +I+GY G+ ++AL L G++ D +T S+LS
Sbjct: 136 NARILFDEM--PVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLS 188
Query: 424 ACSHAGLIDEG 434
AC+ AG + G
Sbjct: 189 ACTEAGDFNRG 199
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/655 (37%), Positives = 379/655 (57%), Gaps = 42/655 (6%)
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
LFN+IH + + W ++IR Y ++G ++L + M SG+ + FP VLK+CA
Sbjct: 62 LFNTIHFPPALA--WKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALL 119
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK------CGQTDDGC-KVFDEMSVR-- 174
+ G+ +HG IIR G D Y AL++MY+K G+ G +VFDEM+ R
Sbjct: 120 MDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTR 179
Query: 175 -----------------------DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
DLVSW +I + EE L + ++ L DS
Sbjct: 180 SVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDS 239
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
T+ SV + + D+ + + +HG +I D+ + +S++ MYA+C V + VF +
Sbjct: 240 FTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTL 299
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ +RD ISWNS++ G +QNG E L F +M + KP + ++ AC +L + LG
Sbjct: 300 LTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 359
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ HGYI + + + ++++DMYAKCG++ TA+ +F+ + R++ SW +I G
Sbjct: 360 KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRL--RDMVSWTAMIMGCA 417
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEV 450
+HG A+E F QM EG+KP+H+ F ++L+ACSH GL+DE K F MT+ + P V
Sbjct: 418 LHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGV 477
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
+HYA + D+LGRAG L EA+D I M + P S+W LL ACR+H E AN + +
Sbjct: 478 EHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILE 537
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
++P +TG ++L++NIY+A+ +W+E K R M+ G++K A S IE + F D
Sbjct: 538 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 597
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P ++++ + +E + ++ GY+PD S HDVE+E +++++ HSE+LA+ FGI+N
Sbjct: 598 SHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINT 657
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++VTKNLRVC DCH+A +FIS I R+I+VRD +RFHHF+ GTCSC DYW
Sbjct: 658 PAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 258/750 (34%), Positives = 413/750 (55%), Gaps = 73/750 (9%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G + F LK+C L S R H + +G + A ++ Y+ G
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNA-LVAMYSRSG 198
Query: 57 EPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTM------RRSGISSN 109
A +F+ I + WN+++ A+ + L+L+S M + + S+
Sbjct: 199 SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSD 258
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD 169
+ +L ACAS + + K +H IR G +D++V AL+D YAKCG D VF+
Sbjct: 259 IISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFN 318
Query: 170 EMSVRDLVSWTVMITAYEQAEK-----------------------------------PEE 194
M +D+VSW M+T Y Q+ K +E
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQE 378
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE---------- 244
AL FQ+ G +SVTI+S+ SA LG + + H Y++ L
Sbjct: 379 ALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGD 438
Query: 245 --DLCIQNSIVAMYARCGNVEKARLVFDMMEKRD--LISWNSMLTGYIQNGQASEALLLF 300
DL + N+++ MY++C + + AR +F+ + +R+ +++W M+ GY Q G +++AL LF
Sbjct: 439 GEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLF 498
Query: 301 DEMQNSD--CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT--LRNAVMDM 356
EM + PN T ++ AC +L S ++G++ H Y+ + + + N ++DM
Sbjct: 499 SEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDM 558
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y+KCGD+DTA N+F+ + +RN SW +++GYGMHG G++AL+ F +M + G PD I
Sbjct: 559 YSKCGDVDTARNVFDSM--PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDI 616
Query: 417 TFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
+F +L ACSH+G++D+G F M + V +HYAC++D+L R+G L +A+ I++
Sbjct: 617 SFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQE 676
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ P+ ++W ALL ACR+H E A N L ++ E+ G + L+SNIYA + +W++V
Sbjct: 677 MPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDV 736
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
++R+ MK G+KK S ++ K F DR +P E+Y +E + IK+ GY+
Sbjct: 737 ARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYV 796
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P+ + ALHDV+DE++ ++L HSEKLA+A+G++ +P +++TKNLRVC DCHSAF +I
Sbjct: 797 PETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYI 856
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S I +IIVRD++RFHHF+ G+CSC YW
Sbjct: 857 SKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 263/567 (46%), Gaps = 86/567 (15%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLIN-------------------QALHLGAKIIIKY 52
+ LLK C + ++RQIH + GL++ LG ++ Y
Sbjct: 34 FASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASY 93
Query: 53 TTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYT 112
G + A S+ + S + WN ++RA+ G + + M R+G + +T
Sbjct: 94 LACGATSDALSVLERV--VPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFT 151
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
P+ LKAC G HG I GF S+ +V ALV MY++ G +D VFDE++
Sbjct: 152 LPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEIT 211
Query: 173 ---VRDLVSWTVMITAYEQAEKPEEALILF--------QKTQQEGLLSDSVTIVSVASAV 221
+ D++SW ++ A+ + P AL LF +K E SD ++IV++ A
Sbjct: 212 RKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNE--RSDIISIVNILPAC 269
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L + + + +H YAI N D + N+++ YA+CG+++ A VF++ME +D++SWN
Sbjct: 270 ASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWN 329
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSD---------------------------------- 307
+M+TGY Q+G+ A LF M+ +
Sbjct: 330 AMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILY 389
Query: 308 -CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM------------KIDATLRNAVM 354
+PN VT + L+SAC LG+ G + H Y + + D + NA++
Sbjct: 390 GSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALI 449
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE--GVK 412
DMY+KC A +FN I ERNV +W V+I GY +G AL+ FS+M+ + V
Sbjct: 450 DMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVA 509
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA--CMVDMLGRAGCLYEAF 470
P+ T + IL AC+H + G++ A +T+ ++ C++DM + G + A
Sbjct: 510 PNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTAR 569
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHGE 497
++ MP N+ W +++ +HG
Sbjct: 570 NVFDSMP-KRNEVSWTSMMSGYGMHGR 595
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/673 (36%), Positives = 389/673 (57%), Gaps = 17/673 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L++C L L R++H + G + + A +I Y G+ +AR +F+ +
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA-LITMYVKCGDIFSARLVFDRMPRR 259
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y N C+E L L+ MR + + T V+ AC + G+
Sbjct: 260 DRIS--WNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGRE 317
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VHG +I+TGF+++ V +L+ M++ G D+ VF +M +DLVSWT MI+ YE+
Sbjct: 318 VHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGL 377
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
PE+A+ + + EG++ D +TI SV SA LG + K +H +A + + NS
Sbjct: 378 PEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANS 437
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY++C ++KA VF + +++ISW S++ G N ++ EAL F +M S KPN
Sbjct: 438 LIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPN 496
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++SAC +G+ G++ H + + + + D L NA++DMY +CG ++ A N FN
Sbjct: 497 SVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFN 556
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
E++V+SWN+L+ GY G G A+E F +M+E V PD ITFTS+L ACS +G++
Sbjct: 557 S---CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMV 613
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+G + F M K + P +KHYA +VD+LGRAG L +A++ IK+MP+ P+ ++WGALL
Sbjct: 614 TDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLN 673
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRI+ GE+AA ++F+++ + GY++L+ N+YA S KW EV ++R+ M+ L
Sbjct: 674 ACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVD 733
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S +E + F T D +P KE+ +E +++ G D+ D +
Sbjct: 734 PGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDI-DASK 792
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ HSE+LA+AFG++N P + VTKNL +C +CH+ +FIS + RR I VRD +
Sbjct: 793 AEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQ 852
Query: 666 FHHFEGGTCSCND 678
FHHF+ G CSC D
Sbjct: 853 FHHFKDGVCSCGD 865
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 242/466 (51%), Gaps = 9/466 (1%)
Query: 9 EGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
E Y LL+ C + + + +HS ++ + + + LG ++ + +G+ A +F
Sbjct: 94 EETYIALLRLCEWKRAASEGSRVHSYVSKT-VTRLGVRLGNALLSMFVRFGDLVEAWYVF 152
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ +S WN ++ YA G+ E L LY M GI + YTFP VL+ C
Sbjct: 153 GKMAERDLFS--WNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
+ G+ VH +IR GF SD V AL+ MY KCG VFD M RD +SW MI+
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISG 270
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y + + E L LF ++ + D +T+ SV SA LGD + VHGY I F+ +
Sbjct: 271 YFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ + NS++ M++ G ++A +VF ME +DL+SW +M++GY +NG +A+ + M++
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
P+ +T ++SAC LG G H + + + + N+++DMY+KC +D
Sbjct: 391 EGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDK 450
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F+ I +NV SW +I G ++ +AL FF QM+ +KP+ +T S+LSAC
Sbjct: 451 ALEVFHRI--PNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSAC 507
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+ G + G++ A + + + ++DM R G + A++
Sbjct: 508 ARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 229/430 (53%), Gaps = 8/430 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N++I G + L +M+ +S T+ +L+ C EG VH + +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
T + AL+ M+ + G + VF +M+ RDL SW V++ Y +A +EAL L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
+ + G+ D T V G L D+ + + VH + I F D+ + N+++ MY +
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG++ ARLVFD M +RD ISWN+M++GY +N E L LF M+ P+ +T +
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+SAC LG +LGR+ HGY+I + + ++ N+++ M++ G D AE +F+ + +
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM--EFK 360
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC- 437
++ SW +I+GY +G KA+E ++ M EGV PD IT S+LSAC+ GL+D+G
Sbjct: 361 DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLH 420
Query: 438 -FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI-H 495
FAD T L+ V + ++DM + C+ +A ++ ++P N W +++L R+ +
Sbjct: 421 EFADRTGLTSYVIVAN--SLIDMYSKCRCIDKALEVFHRIP-NKNVISWTSIILGLRLNY 477
Query: 496 GEIAANYLFQ 505
A + FQ
Sbjct: 478 RSFEALFFFQ 487
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/667 (36%), Positives = 388/667 (58%), Gaps = 42/667 (6%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISS-NS 110
Y+ G+ +T + +F+ + N S WN++I Y G VE ++ Y++M + G+ + N
Sbjct: 81 YSKSGDLSTMQEIFSIMPNRDGVS--WNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNR 138
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
TF +L +S + G+ +HG I++ GF + +V ++LVDMYAK G +VFDE
Sbjct: 139 ITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDE 198
Query: 171 -------------------------------MSVRDLVSWTVMITAYEQAEKPEEALILF 199
M RD +SWT MIT Q EA+ LF
Sbjct: 199 VQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLF 258
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ +QEG+ D T SV +A G L + + + +H I + + ++ + +++V MY +C
Sbjct: 259 RDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKC 318
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
+V A VF M ++++SW +ML GY QNG + EA+ +F +MQ + +P+ T ++
Sbjct: 319 RSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVI 378
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
S+C L S + G +FH + S + T+ NA++ +Y KCG ++ + +F+++ S R+
Sbjct: 379 SSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM--SFRD 436
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
SW L++GY G + ++ F +ML +G+KPD +TF ++LSACS AGL++ G++ F
Sbjct: 437 EVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFE 496
Query: 440 DMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-- 496
M K + P HY CM+D+ GRAG L EA + I +MP P+ W LL +CR++G
Sbjct: 497 SMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNE 556
Query: 497 EI---AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
EI AA L +L+P++ ++L+S+IYAA KW V +LR M+ KG +K FS I+Y
Sbjct: 557 EIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKY 616
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F D+ +P+ ++Y ++E + ++ GY+PD S LHDVED ++ MLN+HS
Sbjct: 617 KSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHS 676
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLA+AFG++ + ++V KNLRVC DCH+A ++IS I +R+I+VRDA RFH F+ GT
Sbjct: 677 EKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGT 736
Query: 674 CSCNDYW 680
CSC D+W
Sbjct: 737 CSCGDFW 743
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 198/437 (45%), Gaps = 70/437 (16%)
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
K C + K +H II++ ++++ L++ Y+K G VFD+M +
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 178 SWTVMITAYEQAEKPE-------------------------------EALILFQKTQQEG 206
SW M++AY ++ EA+ + ++G
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 207 LLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+L+ + +T ++ V G V + +HG + F + + +S+V MYA+ G V A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 266 RLVFDM-------------------------------MEKRDLISWNSMLTGYIQNGQAS 294
VFD M++RD ISW +M+TG IQNG +
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EA+ LF +M+ + T +++AC L + + G++ H II S + + +A++
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
DMY KC + AE +F + + +NV SW ++ GYG +G +A+ F M G++PD
Sbjct: 313 DMYCKCRSVRYAEAVFKRM--ANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPD 370
Query: 415 HITFTSILSACSHAGLIDEGRK--CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
T S++S+C++ ++EG + C A ++ L V + ++ + G+ G + ++ +
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSN--ALITLYGKCGSIEDSNQL 428
Query: 473 IKQMPLPPNDSVWGALL 489
+M ++ W AL+
Sbjct: 429 FDEMSF-RDEVSWTALV 444
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 68/327 (20%)
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+A+ +H I + + + N+++ Y++ GN+ AR VFD M + + SWN+ML+ Y
Sbjct: 23 QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYS 82
Query: 289 QNGQASEALLLFDEMQNSD------------CKPNPV----------------------- 313
++G S +F M N D C + V
Sbjct: 83 KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFS 142
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T L+LVS+ G LGR+ HG I+ + ++++DMYAK G + A +F+++
Sbjct: 143 TMLLLVSS---QGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEV 199
Query: 374 HP-----------------------------SERNVSSWNVLIAGYGMHGHGRKALEFFS 404
ER+ SW +I G +G +A++ F
Sbjct: 200 QERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFR 259
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
M +EG+ D TF S+L+AC + EG++ + + V + +VDM +
Sbjct: 260 DMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCR 319
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ A + K+M N W A+L+
Sbjct: 320 SVRYAEAVFKRMA-NKNVVSWTAMLVG 345
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/611 (36%), Positives = 369/611 (60%), Gaps = 11/611 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN+++ ++ N+G ++ L L +M SG S N TF L AC + +G+++HG ++
Sbjct: 420 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 479
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+G + + ALV MY K G+ + +V +M RD+V+W +I Y + E P++AL
Sbjct: 480 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 539
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVL-KAQAVHGYAICNAFLEDLCIQNSIVAMY 256
FQ + EG+ S+ +T+VSV SA GD+L + + +H Y + F D ++NS++ MY
Sbjct: 540 AFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 599
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+CG++ ++ +F+ ++ R++I+WN+ML +G E L L +M++ + +
Sbjct: 600 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 659
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
+SA L + G++ HG + + D+ + NA DMY+KCG++ M + PS
Sbjct: 660 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM---LPPS 716
Query: 377 -ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
R++ SWN+LI+ G HG+ + F +MLE G+KP H+TF S+L+ACSH GL+D+G
Sbjct: 717 VNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 776
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ + + ++P ++H C++D+LGR+G L EA I +MP+ PND VW +LL +C+I
Sbjct: 777 AYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI 836
Query: 495 HGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
HG + AA L +LEPE +VL SN++A + +W +V +R+ M K +KK A S
Sbjct: 837 HGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACS 896
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
++ + F DR +P E+Y K+E + IK +GY+ D S AL D ++E +EH L
Sbjct: 897 WVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNL 956
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSE+LA+A+ +M+ + V++ KNLR+C+DCHS ++F+S + R+I++RD RFHHF
Sbjct: 957 WNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHF 1016
Query: 670 EGGTCSCNDYW 680
E G CSC DYW
Sbjct: 1017 ERGLCSCKDYW 1027
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 219/468 (46%), Gaps = 38/468 (8%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN--SIHNDKSYSFLWNTMIR 83
R +H+ L GL+ ++ +I YT +G AR LF+ + N+ S WNTM+
Sbjct: 92 RAVHA-LCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVS----WNTMMS 146
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA-SNSLILEGKVVHGDIIRTGFL 142
G +E +E + M GI +S+ ++ AC S S+ EG VHG + ++G L
Sbjct: 147 GIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLL 206
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
SD YV A++ +Y G KVF+EM R++VSWT ++ Y +PEE + +++
Sbjct: 207 SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK-- 264
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
D + + G + + L ++NS+++M GNV
Sbjct: 265 -----------------------DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNV 301
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
+ A +FD M +RD ISWNS+ Y QNG E+ +F M+ + N T L+S
Sbjct: 302 DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 361
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
++ ++ GR HG ++ + N ++ MYA G A +F + P+ +++ S
Sbjct: 362 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM-PT-KDLIS 419
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
WN L+A + G AL M+ G +++TFTS L+AC ++GR +
Sbjct: 420 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 479
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
+ +V M G+ G + E+ ++ QM P D V W AL+
Sbjct: 480 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM--PRRDVVAWNALI 525
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/536 (25%), Positives = 243/536 (45%), Gaps = 52/536 (9%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H + SGL++ +++ I+ Y YG + +R +F + + S W +++ Y+
Sbjct: 195 QVHGFVAKSGLLSD-VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVS--WTSLMVGYS 251
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+ G E +++Y SL G+ + G ++++G S
Sbjct: 252 DKGEPEEVIDIYK----------------------DESL---GRQIIGQVVKSGLESKLA 286
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V+ +L+ M G D +FD+MS RD +SW + AY Q EE+ +F ++
Sbjct: 287 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 346
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+S T+ ++ S +G + + +HG + F +C+ N+++ MYA G +A
Sbjct: 347 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 406
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
LVF M +DLISWNS++ ++ +G++ +AL L M +S N VT ++AC
Sbjct: 407 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 466
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ GR HG ++ S + + + NA++ MY K G++ + + + R+V +WN L
Sbjct: 467 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL--LQMPRRDVVAWNAL 524
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG-LIDEGRKCFADMTKLS 445
I GY KAL F M EGV ++IT S+LSAC G L++ G+ A +
Sbjct: 525 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 584
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQ 505
+ + ++ M + G L + D+ + N W A+L A HG
Sbjct: 585 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH-------- 635
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVG-KLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
+ +K R G L + ++GL A +V+E G+ + G
Sbjct: 636 -----------GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 680
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/680 (36%), Positives = 388/680 (57%), Gaps = 18/680 (2%)
Query: 12 YDQLLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYG-EPNTARSLFNS 67
+ LL+SC+ F + I + L +G + + +G +I +T G + +AR +F+
Sbjct: 148 FTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDK 207
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ + + W MI Y+ G + ++L+ + S + + +T +L AC
Sbjct: 208 MQHKNLVT--WTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFS 265
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
GK +H +IR+G SD +V LVDMYAK ++ K+F+ M +++SWT +I+ Y
Sbjct: 266 LGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYV 325
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q+ + +EA+ LF + + T SV A L D + +HG I C
Sbjct: 326 QSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINC 385
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD-EMQNS 306
+ NS++ MYAR G +E AR F+++ +++LIS+N T N +A ++ F+ E++++
Sbjct: 386 VGNSLINMYARSGTMECARKAFNILFEKNLISYN---TAADANAKALDSDESFNHEVEHT 442
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+P T L+S +G+ G + H I+ S + + NA++ MY+KCG+ + A
Sbjct: 443 GVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAA 502
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+FND+ RNV +W +I+G+ HG KALE F +MLE GVKP+ +T+ ++LSACS
Sbjct: 503 LQVFNDM--GYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACS 560
Query: 427 HAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H GLIDE K F M S+ P ++HYACMVD+LGR+G L EA + I MP + VW
Sbjct: 561 HVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVW 620
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
L +CR+H GE AA + + EP ++L+SN+YA+ +W +V LR+ MK K
Sbjct: 621 RTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQK 680
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
L K +S IE + FH D +P +++Y +++ +A++IK GY+P+ LHDV
Sbjct: 681 KLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDV 740
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
EDE +E L HSEK+AVA+ +++ ++V KNLRVC DCH+A ++IS + R+I+V
Sbjct: 741 EDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVV 800
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RDANRFHH + G CSCNDYW
Sbjct: 801 RDANRFHHIKDGKCSCNDYW 820
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 236/492 (47%), Gaps = 18/492 (3%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LLK+C +L + +H L SGL ++ L + I + Y+ G+ A S+F ++ +
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITL-YSKCGDWENALSIFRNMGHH 103
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTM---RRSGISSNSYTFPFVLKACASNSLILE 128
K W+ +I +ANN L + M R+ I N Y F +L++C++
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 129 GKVVHGDIIRTGFLSDSY--VQAALVDMYAKCGQTDDGCK-VFDEMSVRDLVSWTVMITA 185
G + +++TG+ DS+ V AL+DM+ K G + VFD+M ++LV+WT+MIT
Sbjct: 164 GLAIFAFLLKTGYF-DSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y Q ++A+ LF + D T+ S+ SA +L + +H + I + D
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ + ++V MYA+ VE +R +F+ M +++SW ++++GY+Q+ Q EA+ LF M +
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH 342
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
PN T ++ AC L +G++ HG I + + N++++MYA+ G ++
Sbjct: 343 GHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMEC 402
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITFTSILSA 424
A FN + E+N+ S+N + + E F+ +E GV T+ +LS
Sbjct: 403 ARKAFNILF--EKNLISYN---TAADANAKALDSDESFNHEVEHTGVGASPFTYACLLSG 457
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
+ G I +G + A + K + ++ M + G A + M N
Sbjct: 458 AACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGY-RNVIT 516
Query: 485 WGALLLACRIHG 496
W +++ HG
Sbjct: 517 WTSIISGFAKHG 528
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 200/417 (47%), Gaps = 36/417 (8%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS-- 172
+LKAC + + GK++H +I +G DS + +L+ +Y+KCG ++ +F M
Sbjct: 44 LLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHH 103
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQ-------------EGLLSDSVTIVSVAS 219
RDLVSW+ +I+ + AL+ F Q LL + +
Sbjct: 104 KRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTT 163
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG-NVEKARLVFDMMEKRDLI 278
+ +LK GY F +C+ +++ M+ + G +++ AR+VFD M+ ++L+
Sbjct: 164 GLAIFAFLLKT----GY-----FDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLV 214
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+W M+T Y Q G +A+ LF + S+ P+ T L+SAC L LG++ H ++
Sbjct: 215 TWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWV 274
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
I S + D + ++DMYAK ++ + +FN + NV SW LI+GY ++
Sbjct: 275 IRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM--LHHNVMSWTALISGYVQSRQEQE 332
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
A++ F ML V P+ TF+S+L AC+ G++ KL + +++
Sbjct: 333 AIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLIN 392
Query: 459 MLGRAG---CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEHTG 512
M R+G C +AF+++ + L ++ A A + ++ F E EHTG
Sbjct: 393 MYARSGTMECARKAFNILFEKNLISYNTAADANAKA------LDSDESFNHEVEHTG 443
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 139/329 (42%), Gaps = 45/329 (13%)
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
D + L+ ++++ A ++ E +L K GL DSV +
Sbjct: 31 LDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLL------------- 77
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM--EKRDLISWNSMLT 285
NS++ +Y++CG+ E A +F M KRDL+SW+++++
Sbjct: 78 ----------------------NSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIIS 115
Query: 286 GYIQNGQASEALLLFDEM---QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
+ N S ALL F M + PN L+ +C+ G +++ +
Sbjct: 116 CFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTG 175
Query: 343 -MKIDATLRNAVMDMYAKCG-DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ A++DM+ K G D+ +A +F+ + +N+ +W ++I Y G A+
Sbjct: 176 YFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQ--HKNLVTWTLMITRYSQLGLLDDAV 233
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
+ F ++L PD T TS+LSAC G++ + + + + +V +VDM
Sbjct: 234 DLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMY 293
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++ + + + M L N W AL+
Sbjct: 294 AKSAAVENSRKIFNTM-LHHNVMSWTALI 321
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/611 (36%), Positives = 369/611 (60%), Gaps = 11/611 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN+++ ++ N+G ++ L L +M SG S N TF L AC + +G+++HG ++
Sbjct: 330 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 389
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+G + + ALV MY K G+ + +V +M RD+V+W +I Y + E P++AL
Sbjct: 390 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 449
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVL-KAQAVHGYAICNAFLEDLCIQNSIVAMY 256
FQ + EG+ S+ +T+VSV SA GD+L + + +H Y + F D ++NS++ MY
Sbjct: 450 AFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 509
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+CG++ ++ +F+ ++ R++I+WN+ML +G E L L +M++ + +
Sbjct: 510 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 569
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
+SA L + G++ HG + + D+ + NA DMY+KCG++ M + PS
Sbjct: 570 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM---LPPS 626
Query: 377 -ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
R++ SWN+LI+ G HG+ + F +MLE G+KP H+TF S+L+ACSH GL+D+G
Sbjct: 627 VNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 686
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ + + ++P ++H C++D+LGR+G L EA I +MP+ PND VW +LL +C+I
Sbjct: 687 AYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI 746
Query: 495 HGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
HG + AA L +LEPE +VL SN++A + +W +V +R+ M K +KK A S
Sbjct: 747 HGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACS 806
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
++ + F DR +P E+Y K+E + IK +GY+ D S AL D ++E +EH L
Sbjct: 807 WVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNL 866
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSE+LA+A+ +M+ + V++ KNLR+C+DCHS ++F+S + R+I++RD RFHHF
Sbjct: 867 WNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHF 926
Query: 670 EGGTCSCNDYW 680
E G CSC DYW
Sbjct: 927 ERGLCSCKDYW 937
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 219/442 (49%), Gaps = 12/442 (2%)
Query: 52 YTTYGEPNTARSLFN--SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSN 109
YT +G AR LF+ + N+ S WNTM+ G +E +E + M GI +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVS----WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPS 57
Query: 110 SYTFPFVLKACA-SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
S+ ++ AC S S+ EG VHG + ++G LSD YV A++ +Y G KVF
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
+EM R++VSWT ++ Y +PEE + +++ + EG+ + ++ V S+ G L D
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+ + G + + L ++NS+++M GNV+ A +FD M +RD ISWNS+ Y
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
QNG E+ +F M+ + N T L+S ++ ++ GR HG ++
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ N ++ MYA G A +F + P+ +++ SWN L+A + G AL M+
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQM-PT-KDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
G +++TFTS L+AC ++GR + + +V M G+ G + E
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 469 AFDMIKQMPLPPNDSV-WGALL 489
+ ++ QM P D V W AL+
Sbjct: 416 SRRVLLQM--PRRDVVAWNALI 435
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 162/337 (48%), Gaps = 4/337 (1%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY K G+ +FD M VR+ VSW M++ + E + F+K G+ S
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 214 IVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
I S+ +A G+ G + + VHG+ + L D+ + +I+ +Y G V +R VF+ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
R+++SW S++ GY G+ E + ++ M+ N + +++S+C L LGR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ G ++ S ++ + N+++ M G++D A +F+ + SER+ SWN + A Y
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM--SERDTISWNSIAAAYAQ 238
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
+GH ++ FS M + + T +++LS H GR + K+ V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++ M AG EA + KQMP S W +L+
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLM 334
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 132/258 (51%), Gaps = 13/258 (5%)
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY + G V+ AR +FD+M R+ +SWN+M++G ++ G E + F +M + KP+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 315 ALILVSACTYLGSR-QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
LV+AC GS + G + HG++ S + D + A++ +Y G + + +F ++
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
+RNV SW L+ GY G + ++ + M EGV + + + ++S+C GL+ +
Sbjct: 121 --PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKD 175
Query: 434 ---GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
GR+ + K ++ ++ ++ MLG G + A + QM D++ W ++
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM--SERDTISWNSIA 233
Query: 490 LACRIHGEIAANY-LFQL 506
A +G I ++ +F L
Sbjct: 234 AAYAQNGHIEESFRIFSL 251
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 253/686 (36%), Positives = 388/686 (56%), Gaps = 51/686 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++ + LI+ + L Y G + AR+LFN + S WN M+ +
Sbjct: 111 RKVFEKMPDRDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVS--WNAMLSGF 163
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A NG E +++ M + N ++ +L A N I + + + + +S
Sbjct: 164 AQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVS-- 217
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ-- 203
L+ Y + + DD +FD M VRD +SW +MIT Y Q EA LF++
Sbjct: 218 --WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR 275
Query: 204 -------------QEGLLSDSVTIVSVASAVGQLG-DVLKAQAVHGYAICNAFLEDLCIQ 249
Q G+L ++ I ++ + + A V I A +L Q
Sbjct: 276 DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKA--RELFDQ 333
Query: 250 ---------NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
N++V YA+CGN+++A+++FD M +RD ISW +M++GY Q+GQ+ EAL LF
Sbjct: 334 MPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLF 393
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M+ N +S+C + + +LG++ HG ++ + + NA++ MY KC
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC 453
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G ++ A ++F DI +E+++ SWN +IAGY HG G++AL F M + +KPD +T
Sbjct: 454 GSIEEAFDVFEDI--TEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVG 510
Query: 421 ILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSACSH GL+D+G + F M + + KHY CM+D+LGRAG L EA +++K MP
Sbjct: 511 VLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 480 PNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P+ + WGALL A RIHG E AA +F++EP+++G +VL+SN+YAAS +WREV ++R
Sbjct: 571 PDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMR 630
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
M++KG+KK +S +E F D +P + +Y +E + +E+K G++
Sbjct: 631 SKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTK 690
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
LHDVE+E++EHML YHSEKLAVAFGI+++ P ++V KNLRVC DCH+A + IS I
Sbjct: 691 LVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKIT 750
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
+R+IIVRD+NRFHHF G+CSC DYW
Sbjct: 751 QRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 200/476 (42%), Gaps = 110/476 (23%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN I AY G C L +++ MRR S+ +Y N++I
Sbjct: 63 WNRKISAYMRKGQCESALSVFNGMRRR--STVTY-----------NAMI----------- 98
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+G+LS++ A KVF++M RDL+SW VM++ Y + A
Sbjct: 99 -SGYLSNNKFDCAR--------------KVFEKMPDRDLISWNVMLSGYVKNGNLSAARA 143
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC---------------NAF 242
LF + ++ D V+ ++ S Q G V +A+ + + N
Sbjct: 144 LFNQMPEK----DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGR 199
Query: 243 LED------------LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ED + N ++ Y R ++ AR +FD M RD ISWN M+TGY QN
Sbjct: 200 IEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN 259
Query: 291 GQASEALLLFDEMQNSDC---------------------------KPNPVTALILVSACT 323
G SEA LF+E+ D + N V+ +++
Sbjct: 260 GLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAG-- 317
Query: 324 YLGSRQL--GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
Y+ S+Q+ R+ + + N + N ++ YA+CG++D A+ +F+++ +R+
Sbjct: 318 YVQSQQIEKARELFDQMPSRN----TSSWNTMVTGYAQCGNIDQAKILFDEM--PQRDCI 371
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SW +I+GY G +AL F +M +G + LS+C+ ++ G++ +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
K + ++ M G+ G + EAFD+ + + D V W ++ HG
Sbjct: 432 VKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED--ITEKDIVSWNTMIAGYARHG 485
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 179/421 (42%), Gaps = 71/421 (16%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ Y + GQ + VF+ M R V++ MI+ Y K + A +F+K L+S
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLIS-- 124
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
N +++ Y + GN+ AR +F+
Sbjct: 125 -------------------------------------WNVMLSGYVKNGNLSAARALFNQ 147
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M ++D++SWN+ML+G+ QNG EA +FD+M N ++ L+SA G +
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
R+ + +S M + N +M Y + LD A ++F D P R+ SWN++I GY
Sbjct: 204 RR----LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLF-DRMPV-RDKISWNIMITGYA 257
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
+G +A F EE D +T+++S G++DE + F +M + K EV
Sbjct: 258 QNGLLSEARRLF----EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE---KNEVS 310
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-AANYLFQLEPEH 510
+ M+ ++ + +A ++ QMP N S W ++ G I A LF P+
Sbjct: 311 -WNAMIAGYVQSQQIEKARELFDQMP-SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQR 368
Query: 511 TGY-FVLMSNIYAASNKWREVGKLREDMKNKG-----------LKKPAAFSVIEYGKDIQ 558
+ M + YA S + E L MK G L A + +E GK +
Sbjct: 369 DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLH 428
Query: 559 G 559
G
Sbjct: 429 G 429
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/675 (34%), Positives = 390/675 (57%), Gaps = 16/675 (2%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAK-IIIKYTTYGEPNTARSLFNSIHNDK 72
Q+ L+ R++H++L G L++ +++ Y YG ++A +F I +K
Sbjct: 275 QVCAELGLLSLGRELHAALLKCG---SELNIQCNALLVMYAKYGRVDSALRVFGQI-AEK 330
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
Y WN+M+ Y N E ++ + M + G + + A S + G+
Sbjct: 331 DY-ISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREF 389
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H I+ +D V L+DMY KCG + KVF+ M +RD +SWT ++ + Q+ +
Sbjct: 390 HAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRH 449
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EAL + + Q+EG++ DS+ I S+ L + + VH YAI N L DL ++N +
Sbjct: 450 SEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLL-DLILENRL 508
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ +Y CG + + +F +EK+D++SW SM+ NG+ + A+ LF EMQ ++ +P+
Sbjct: 509 IDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDS 568
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
V + ++ A L S G++ HG++I N I+ + ++++DMY+ CG ++ A +F
Sbjct: 569 VALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFE- 627
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
++V W +I GMHGHG++A++ F +ML+ G+ PDH++F ++L ACSH+ L++
Sbjct: 628 -RAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVE 686
Query: 433 EGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG+ M +K +KP +HYAC+VD+LGR+G EA++ IK MP+ P +VW ALL A
Sbjct: 687 EGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGA 746
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CR+H +AAN L +LEP++ G ++L+SN++A KW + R M +GL+K
Sbjct: 747 CRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNP 806
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM-AGYMPDLSCALHDVEDEDR 605
A S IE G +I F + D + + ++ K+ + ++ GY+ D LHD +E++
Sbjct: 807 ACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEK 866
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
ML+ HSE++A+AFG+++ P +++ KNLRVC DCH + +S ++ R I+VRDANR
Sbjct: 867 IDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANR 926
Query: 666 FHHFEGGTCSCNDYW 680
FHHF GG+CSC D+W
Sbjct: 927 FHHFSGGSCSCEDFW 941
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 207/408 (50%), Gaps = 14/408 (3%)
Query: 26 RQIHSSLTTSGLINQA--LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
RQ+H+ T+G +N+ L K++ Y G + AR LFN + +S WN ++
Sbjct: 77 RQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFS--WNALVG 134
Query: 84 AYANNGHCVETLELYSTMRRS---GISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
AY ++G E + +Y MR S G + + T VLKAC + G VHG ++ G
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFD--EMSVRDLVSWTVMITAYEQAEKPEEALIL 198
+ V AL+ MYAKCG D +VF+ + RD+ SW +++ Q + EAL L
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI-CNAFLEDLCIQNSIVAMYA 257
F+ Q G +S T V+V +LG + + +H + C + L C N+++ MYA
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQC--NALLVMYA 312
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+ G V+ A VF + ++D ISWNSML+ Y+QN +EA+ F EM +P+ +
Sbjct: 313 KYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVS 372
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L SA +L GR+FH Y I + D + N +MDMY KCG ++ + +F +
Sbjct: 373 LSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESM--GI 430
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
R+ SW ++A + +ALE ++ +EG+ D + SIL C
Sbjct: 431 RDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC 478
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 263/530 (49%), Gaps = 22/530 (4%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C R ++H GL L A +I Y G ++A +F + D
Sbjct: 170 VLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANA-LIGMYAKCGLLDSALRVFEWLQQD 228
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
WN+++ NG +E L L+ M+ +G NSYT VL+ CA L+ G+
Sbjct: 229 ARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRE 288
Query: 132 VHGDIIRTGFLSDSYVQA-ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+H +++ G S+ +Q AL+ MYAK G+ D +VF +++ +D +SW M++ Y Q
Sbjct: 289 LHAALLKCG--SELNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNS 346
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EA+ F + Q G D +VS++SA+G L + + H YAI DL + N
Sbjct: 347 FYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGN 406
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ MY +CG++E + VF+ M RD ISW ++L + Q+ + SEAL + E+Q
Sbjct: 407 TLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMV 466
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ + ++ C L S L ++ H Y I + + +D L N ++D+Y +CG+ D + N+F
Sbjct: 467 DSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLF 525
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ ++++ SW +I +G A+ F++M + ++PD + SIL A +
Sbjct: 526 QRVE--KKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSS 583
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+ +G++ + + + E + +VDM G + A + ++ + +W A++
Sbjct: 584 LTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKC-KDVVLWTAMIN 642
Query: 491 ACRIHGE-IAANYLFQ------LEPEHTGYFVLMSNIYAAS-NKWREVGK 532
A +HG A LF+ L P+H + L+ YA S +K E GK
Sbjct: 643 ATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALL---YACSHSKLVEEGK 689
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 207/388 (53%), Gaps = 13/388 (3%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLS---DSYVQAALVDMYAKCGQTDDGCKVFD 169
+ +VL A+ EG+ VH + TG L+ D ++ LV MY +CG+ DD ++F+
Sbjct: 60 YGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFN 119
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILF---QKTQQEGLLSDSVTIVSVASAVGQLGD 226
M R + SW ++ AY + EA+ ++ + + G D T+ SV A G GD
Sbjct: 120 GMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGD 179
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK--RDLISWNSML 284
VHG A+ + + N+++ MYA+CG ++ A VF+ +++ RD+ SWNS++
Sbjct: 180 GRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVV 239
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
+G +QNG+ EAL LF MQ++ N T++ ++ C LG LGR+ H ++ +
Sbjct: 240 SGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSE 299
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
++ NA++ MYAK G +D+A +F I +E++ SWN +++ Y + +A++FF
Sbjct: 300 LNIQC-NALLVMYAKYGRVDSALRVFGQI--AEKDYISWNSMLSCYVQNSFYAEAIDFFG 356
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
+ML+ G +PDH S+ SA H ++ GR+ A K + +++ ++DM + G
Sbjct: 357 EMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCG 416
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLAC 492
+ + + + M + D + +LAC
Sbjct: 417 SIECSAKVFESMGI--RDHISWTTILAC 442
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/643 (36%), Positives = 377/643 (58%), Gaps = 10/643 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G+ ++ Y + AR +F+ + + + LWNTMI N ++++L+ M
Sbjct: 145 VGSALVDLYCKFSRVVYARKVFDGM--PERDTVLWNTMINGLVKNCCFDDSIQLFREMVA 202
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
G+ +S T VL A A + G + ++ GF YV L+ +Y+KCG +
Sbjct: 203 DGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNT 262
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
+F ++ DL+++ MI+ + E ++ LF++ G S TIV +
Sbjct: 263 ARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSP 322
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
G + A ++HG+ + + + + + + A+Y + ++ AR +FD ++ +++WN+M
Sbjct: 323 FGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAM 382
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
++GY QNG A+ LF EM ++ PN VT ++SAC LGS G+ H I + N+
Sbjct: 383 ISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENL 442
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ + + A++DMYAKCG++ A +F+ + SE+N +WN +I GYG+HG+G +AL+ +
Sbjct: 443 EPNIYVSTALVDMYAKCGNISEAWQLFDSM--SEKNTVTWNTMIFGYGLHGYGHEALKLY 500
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGR 462
++ML G P +TF S+L ACSHAGL+ EG + F +M K ++P ++HYACMVD+LGR
Sbjct: 501 NEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGR 560
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLM 517
+G L +A + IK+MP+ P +VWG LL AC IH +A+ LF+L+P GY+VL+
Sbjct: 561 SGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLL 620
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SNIY+ + + +R+ +K + L K ++IE F + DR + + ++Y K+
Sbjct: 621 SNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKL 680
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
E + +++ GY + ALHDVE+E++E +N HSEKLA+AFG++ P +++ KNL
Sbjct: 681 EKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNL 740
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
RVC DCH+A +FIS I R I+VRDANRFHHF+ G CSC DYW
Sbjct: 741 RVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 259/523 (49%), Gaps = 26/523 (4%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
L+ + L Q H+ +G L K+ K + AR+LF S+ K
Sbjct: 17 SLINKASTFPHLAQTHAQFILNGYRFDLATL-TKLTQKLFDFSATRHARALFFSV--PKP 73
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVV 132
FL+N ++R ++ N ++ LY+ +RR + +S +++T+ F + AC+++ ++ ++
Sbjct: 74 DIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---LL 130
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H I G+ S+ +V +ALVD+Y K + KVFD M RD V W MI +
Sbjct: 131 HAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCF 190
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH------GYAICNAFLEDL 246
++++ LF++ +G+ DS T+ +V A +L ++ + G+ C+ L L
Sbjct: 191 DDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGL 250
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+++Y++CG+V ARL+F + + DLI++N+M++G+ NG ++ LF E+ S
Sbjct: 251 ------ISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFS 304
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ + T + L+ + G L HG+ + S + ++ T+ A +Y K ++D A
Sbjct: 305 GERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLA 364
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
++F++ E+ V +WN +I+GY +G A+ F +M++ P+ +T T+ILSAC+
Sbjct: 365 RHLFDE--SPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACA 422
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
G + G+ + +++P + +VDM + G + EA+ + M N W
Sbjct: 423 QLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWN 481
Query: 487 ALLLACRIHGEIAANYLFQLEPEHTGY----FVLMSNIYAASN 525
++ +HG E H GY +S +YA S+
Sbjct: 482 TMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSH 524
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/639 (38%), Positives = 375/639 (58%), Gaps = 38/639 (5%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W +R+ + E + Y M SG +++ FP VLKA + + G+ +H +
Sbjct: 60 WVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAV 119
Query: 138 RTGFLSDS---------------------YVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ G+ S S + AL+ MYAK G+ DD +F+ RD+
Sbjct: 120 KFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDM 179
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW MI+++ Q+++ EAL F+ EG+ D VTI SV A L + + +H Y
Sbjct: 180 VSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAY 239
Query: 237 AI-CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ N +E+ + +++V MY C VE R VFD + R + WN+M++GY +NG +
Sbjct: 240 VLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEK 299
Query: 296 ALLLFDEM-QNSDCKPNPVTALILVSACTY-LGSRQLGRKFHGYIINSNMKIDATLRNAV 353
AL+LF EM + + PN T ++ AC + L + G++ H Y I + + D T+ +A+
Sbjct: 300 ALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSAL 359
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG--- 410
+DMYAKCG L+ + +FN++ +NV +WNVLI GMHG G +ALE F M+ E
Sbjct: 360 VDMYAKCGCLNLSRRVFNEM--PNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRG 417
Query: 411 --VKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLY 467
KP+ +TF ++ +ACSH+GLI EG F M V+P HYAC+VD+LGRAG L
Sbjct: 418 GEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLE 477
Query: 468 EAFDMIKQMPLPPND-SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIY 521
EA++++ MP + W +LL ACRIH GE+AA L LEP ++VL+SNIY
Sbjct: 478 EAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIY 537
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
+++ W + ++R++M+ G+KK S IE+ ++ F D +P ++++ +E+++
Sbjct: 538 SSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLS 597
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
+++ GY+PD SC LH+V+++++E++L HSEKLA+AFGI+N P ++V KNLRVCN
Sbjct: 598 EKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCN 657
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH+A +FIS I R+IIVRD RFHHF+ GTCSC DYW
Sbjct: 658 DCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 173/348 (49%), Gaps = 27/348 (7%)
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
R SW + + ++ EA+ + + G D+ +V AV L D+ + +
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 234 HGYAI---------------------CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
H A+ C + N+++AMYA+ G V+ ++ +F+
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
RD++SWN+M++ + Q+ + SEAL F M + + VT ++ AC++L +G+
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234
Query: 333 KFHGYIINSNMKIDAT-LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ H Y++ +N I+ + + +A++DMY C +++ +F+ H R + WN +I+GY
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFD--HILGRRIELWNAMISGYA 292
Query: 392 MHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHA-GLIDEGRKCFADMTKLSVKPE 449
+G KAL F +M++ G+ P+ T S++ AC H+ I +G++ A + + +
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD 352
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ + +VDM + GCL + + +MP N W L++AC +HG+
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGK 399
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 23/287 (8%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L +C+ L L ++IH+ + + + + +G+ ++ Y + + R +F+ I
Sbjct: 220 VLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 279
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACA-SNSLILEG 129
+ LWN MI YA NG + L L+ M + +G+ N+ T V+ AC S + I +G
Sbjct: 280 RIE--LWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKG 337
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
K +H IR SD V +ALVDMYAKCG + +VF+EM +++++W V+I A
Sbjct: 338 KEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMH 397
Query: 190 EKPEEALILFQKTQQEG-----LLSDSVTIVSVASAVGQLGDVLKA-----QAVHGYAIC 239
K EEAL LF+ E + VT ++V +A G + + + H + +
Sbjct: 398 GKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVE 457
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKA-RLVFDMMEKRDLI-SWNSML 284
C +V + R G +E+A LV M + D + +W+S+L
Sbjct: 458 PTSDHYAC----VVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 500
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/662 (35%), Positives = 392/662 (59%), Gaps = 17/662 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ + SGL + + +G ++ Y+ + A+++F+S+ N + S WN+MI +
Sbjct: 214 QVHTMVIKSGL-DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVS--WNSMIAGFV 270
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG +E EL+ MR G+ F V+K CA+ + K +H +I+ G D
Sbjct: 271 TNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLN 330
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL+ Y+KC + DD K+F M V+++VSWT +I+ Y Q + + A+ LF + ++E
Sbjct: 331 IKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + T ++ +A + +H + + + ++ Y++ G+ +A
Sbjct: 391 GVRPNHFTYSTILTA----NAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEA 446
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY- 324
+F++++++D+++W++ML+GY Q G A+ +F ++ +PN T +++AC
Sbjct: 447 AKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAP 506
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
S + G++FH I S + +A++ MYAK G++++A +F +R++ SWN
Sbjct: 507 TASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK--RQVDRDLVSWN 564
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
+I+GY HG G+K+L+ F +M + ++ D ITF ++SAC+HAGL++EG++ F M K
Sbjct: 565 SMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKD 624
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
+ P ++HY+CMVD+ RAG L +A D+I +MP P ++W LL ACR+H GE+
Sbjct: 625 YHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGEL 684
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
AA L L+P+ + +VL+SNIYA + W+E K+R+ M K +KK A +S IE
Sbjct: 685 AAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTF 744
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D +P +Y K+E +++ +K AGY PD LHDVE+E +E +L+ HSE+LA+
Sbjct: 745 SFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAI 804
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AFG++ P +Q+ KNLRVC DCH+ + IS I R I+VRD+NRFHHF+GG+CSC D
Sbjct: 805 AFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGD 864
Query: 679 YW 680
YW
Sbjct: 865 YW 866
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 185/346 (53%), Gaps = 1/346 (0%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N ++ ++ N E L L+ +RRSG ++ + VLK C + GK VH I+
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF+ D V +LVDMY K +DG +VFDEM V+++VSWT ++ Y Q E+AL L
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F + Q EG+ + T +V + G V K VH I + + + NS+V MY++
Sbjct: 181 FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK 240
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
V A+ VFD ME R+ +SWNSM+ G++ NG EA LF M+ K +
Sbjct: 241 SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ C + ++ H +I + D ++ A+M Y+KC ++D A +F +H +
Sbjct: 301 IKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQ- 359
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
NV SW +I+GY +G +A+ F QM EGV+P+H T+++IL+A
Sbjct: 360 NVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA 405
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 249/502 (49%), Gaps = 16/502 (3%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
+RR G T+G +LK C L +Q+H G + + + +G ++ Y
Sbjct: 83 LRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFV-EDVSVGTSLVDMYMKTE 141
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+F+ + S W +++ Y NG + L+L+S M+ GI N +TF V
Sbjct: 142 SVEDGERVFDEMRVKNVVS--WTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAV 199
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L A++ + +G VH +I++G S +V ++V+MY+K D VFD M R+
Sbjct: 200 LGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNA 259
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW MI + EA LF + + EG+ +V + ++ A+ +H
Sbjct: 260 VSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQ 319
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK-RDLISWNSMLTGYIQNGQASE 295
I N DL I+ +++ Y++C ++ A +F MM ++++SW ++++GY+QNG+
Sbjct: 320 VIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDR 379
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
A+ LF +M+ +PN T +++A + Q+ H ++ +N + ++ A+ D
Sbjct: 380 AMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQI----HALVVKTNYENSPSVGTALSD 435
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
Y+K GD + A +F I E+++ +W+ +++GY G A++ F Q+ +EGV+P+
Sbjct: 436 SYSKIGDANEAAKIFELI--DEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNE 493
Query: 416 ITFTSILSACSH-AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
TF+S+L+AC+ +++G++ + K + + +V M + G + A ++ K
Sbjct: 494 FTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 553
Query: 475 QMPLPPNDSVWGALLLACRIHG 496
+ + + W +++ HG
Sbjct: 554 RQ-VDRDLVSWNSMISGYAQHG 574
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 174/366 (47%), Gaps = 9/366 (2%)
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
++FDE + L ++ + + ++ +EAL LF ++ G +D ++ V G L
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
D + + VH I F+ED+ + S+V MY + +VE VFD M ++++SW S+L
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY QNG +AL LF +MQ KPNP T ++ G+ + G + H +I S +
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ N++++MY+K + A+ +F+ + RN SWN +IAG+ +G +A E F +
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSME--NRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M EGVK F +++ C++ + ++ + K ++ ++ +
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AANYLFQL-----EPEHTGYFVLMS 518
+ +AF + M N W A++ +G A N Q+ P H Y +++
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404
Query: 519 NIYAAS 524
A S
Sbjct: 405 ANAAVS 410
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 10/292 (3%)
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
++ +FD ++ L N +L + +N Q EAL LF ++ S + + ++ C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L R +G++ H I D ++ +++DMY K ++ E +F+++ +NV SW
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRV--KNVVSWT 162
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
L+AGY +G +AL+ FSQM EG+KP+ TF ++L + G +++G + + K
Sbjct: 163 SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS 222
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLF 504
+ + MV+M ++ + +A + M N W +++ +G
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTNG-------L 274
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
LE Y + + + + V KL ++K K VI+ G D
Sbjct: 275 DLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSD 326
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/611 (38%), Positives = 363/611 (59%), Gaps = 12/611 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WNT +R A ++ L LY M R G N++TFPF LK+CA+ SL + G HG I
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE--MSVRDLVSWTVMITAYEQAEKPEEA 195
+ G + + +VQ L+ MY K D+ KVF+E S + V + +++ Y K +A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
++LF++ +EG+ +SVT++ + A ++ ++H + F D+ + N + M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y +CG+V A+ +FD M + LISWN+M++GY QNG A+ L L+ M + P+PVT
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ ++S+C LG++ +G + + S + L NA+++MYA+CG+L A+ +F+ +
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM-- 305
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
ER + SW +I GYGMHGHG A++ F +M+ G++PD F +LSACSHAGL D+G
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 365
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F M + ++P +HY+CMVD+LGRAG L EA +I+ MP+ P+ +VWGALL AC+I
Sbjct: 366 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H E+A + +LEPE+ GY+VL+SNIY+ +N + V ++R MK K LKK S
Sbjct: 426 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 485
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
+E + F DR + E+Y+ +E + I P+ + ++D +
Sbjct: 486 YVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDN--REESNKDGFTRV 543
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLAVAFG++N T A V + KNLR+C DCH F+ +S I R++ VRDA RFHHF
Sbjct: 544 GVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHF 603
Query: 670 EGGTCSCNDYW 680
G+CSC DYW
Sbjct: 604 RNGSCSCKDYW 614
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 205/428 (47%), Gaps = 9/428 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G F + LKSC L+ Q H +T G + + + +I Y
Sbjct: 31 MLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPF-VQTGLISMYCKGS 89
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+ AR +F + + + +N ++ Y +N C + + L+ M G+ NS T +
Sbjct: 90 LVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGL 149
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ AC S + G +H ++ GF SD V + MY KCG + K+FDEM V+ L
Sbjct: 150 IPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGL 209
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
+SW M++ Y Q L L++ G+ D VT+V V S+ LG V
Sbjct: 210 ISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFK 269
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ F + + N+++ MYARCGN+ KA+ VFD M +R L+SW +++ GY +G A
Sbjct: 270 MQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIA 329
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMD 355
+ LF EM S +P+ + ++SAC++ G G ++ + N ++ + ++D
Sbjct: 330 VQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVD 389
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+ + G L A+ + + P + + + W L+ +H + A F +++E ++P++
Sbjct: 390 LLGRAGRLKEAQTLIESM-PIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LEPEN 446
Query: 416 ITFTSILS 423
I + +LS
Sbjct: 447 IGYYVLLS 454
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/704 (35%), Positives = 379/704 (53%), Gaps = 74/704 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
++ Y+ G+ ++ F+ + S S W TMI Y N G + + + M + GI
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVS--WTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG-------- 159
+T VL + A+ + GK VH I++ G + V +L++MYAKCG
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 160 -----------------------QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
Q D F++M+ RD+V+W MI+ + Q AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 197 ILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+F K ++ LLS D T+ SV SA L + + +H + + F + N++++M
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 256 YARCGNVEKARL---------------------------------VFDMMEKRDLISWNS 282
Y+RCG VE AR +F ++ RD+++W +
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ GY Q+G EA+ LF M +PN T ++S + L S G++ HG + S
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
++ NA++ MYAK G++ +A F D+ ER+ SW +I HGH +ALE
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAF-DLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLG 461
F ML EG++PDHIT+ + SAC+HAGL+++GR+ F M + + P + HYACMVD+ G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA + I++MP+ P+ WG+LL ACR+H G++AA L LEPE++G +
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
++N+Y+A KW E K+R+ MK+ +KK FS IE + F D +P E+Y
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMT 682
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
++ + EIK GY+PD + LHD+E+E +E +L +HSEKLA+AFG+++ + +++ KN
Sbjct: 683 MKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKN 742
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LRVCNDCH+A +FIS + R+IIVRD RFHHF+ G CSC DYW
Sbjct: 743 LRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 204/458 (44%), Gaps = 87/458 (18%)
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+RT F ++ + A Y+K G D C+ FD++ RD VSWT MI Y+ + +A+
Sbjct: 77 LRTAFSWNTVLSA-----YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAI 131
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+ +EG+ T+ +V ++V + + VH + + ++ + NS++ MY
Sbjct: 132 RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 257 ARCGNVEKARLVFD-------------------------------MMEKRDLISWNSMLT 285
A+CG+ A+ VFD M +RD+++WNSM++
Sbjct: 192 AKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 286 GYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
G+ Q G AL +F +M ++S P+ T ++SAC L +G++ H +I+ +
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 345 IDATLRNAVMDMYAKC---------------------------------GDLDTAENMFN 371
I + NA++ MY++C GD++ A+N+F
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF- 370
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +R+V +W +I GY HG +A+ F M+ G +P+ T ++LS S +
Sbjct: 371 -VSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASL 429
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY---EAFDMIKQMPLPPNDSV-WGA 487
G++ K V ++ M +AG + AFD+I+ D+V W +
Sbjct: 430 SHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR----CERDTVSWTS 485
Query: 488 LLLACRIHG------EIAANYLFQ-LEPEHTGYFVLMS 518
+++A HG E+ L + L P+H Y + S
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 133/307 (43%), Gaps = 61/307 (19%)
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
AQ VH I + + + + N+++ +Y++ G AR +FD M R SWN++L+ Y +
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 290 NGQASEALLLFDEMQNSDC-------------------------------KPNPVTALIL 318
G FD++ D +P T +
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN-----DI 373
+++ + G+K H +I+ ++ + ++ N++++MYAKCGD A+ +F+ DI
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 374 HP------------------------SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
+ER++ +WN +I+G+ G+ +AL+ FS+ML +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 410 G-VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
+ PD T S+LSAC++ + G++ + + ++ M R G +
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 469 AFDMIKQ 475
A +I+Q
Sbjct: 333 ARRLIEQ 339
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 239/666 (35%), Positives = 380/666 (57%), Gaps = 20/666 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+QIH + SGL +Q + +G +I Y G + AR++F ++ S WNTMI
Sbjct: 926 KQIHGIVVRSGL-DQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVS--WNTMISGC 982
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV-----VHGDIIRTG 140
A +G ++ ++ + R G+ + +T VL+AC+S L G +H ++ G
Sbjct: 983 ALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSS----LGGGCHLATQIHACAMKAG 1038
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
+ DS+V L+D+Y+K G+ ++ +F DL SW M+ Y + +AL L+
Sbjct: 1039 VVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYI 1098
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
Q+ G ++ +T+ + A A G L + + + + + F DL + + ++ MY +CG
Sbjct: 1099 LMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCG 1158
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
+E AR +F+ + D ++W +M++G ++NGQ AL + M+ S +P+ T LV
Sbjct: 1159 EMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVK 1218
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
AC+ L + + GR+ H + N D + +++DMYAKCG+++ A +F + S +
Sbjct: 1219 ACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSR--I 1276
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
+SWN +I G HG+ +AL+FF +M GV PD +TF +LSACSH+GL+ E + F
Sbjct: 1277 ASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYS 1336
Query: 441 MTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH---- 495
M K+ ++PE++HY+C+VD L RAG + EA +I MP + S++ LL ACR+
Sbjct: 1337 MQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRE 1396
Query: 496 -GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
G+ A L LEP + +VL+SN+YAA+N+W V R M+ +KK FS ++
Sbjct: 1397 TGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLK 1456
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+ F DR + +Y KVE + I+ GY+PD AL DVE+ED+E L YHSE
Sbjct: 1457 NKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSE 1516
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+A+G+M P ++V KNLRVC DCH+A ++IS ++ R++++RDANRFHHF G C
Sbjct: 1517 KLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVC 1576
Query: 675 SCNDYW 680
SC DYW
Sbjct: 1577 SCGDYW 1582
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 202/404 (50%), Gaps = 28/404 (6%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++ H+ + TSG + L +I Y+ G ++AR LF++ + WN ++ A+
Sbjct: 646 KRAHARILTSGH-HPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A+ + L+ +RRS +S+ +T V K C ++ + +HG ++ G D
Sbjct: 705 ADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDV 762
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V ALV++YAK G+ + +FD M +RD+V W VM+ AY EAL+LF + +
Sbjct: 763 FVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRT 822
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
GL D VT+ ++A V +VL+ Q L+ L + + MY
Sbjct: 823 GLRPDDVTLCTLARVVKSKQNVLEWQ-----------LKQLKAYGTKLFMYDD------- 864
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+ D+I+WN L+ ++Q G+ EA+ F +M NS + +T ++++S L
Sbjct: 865 -----DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGL 919
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+LG++ HG ++ S + ++ N +++MY K G + A +F ++ E ++ SWN
Sbjct: 920 NCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN--EVDLVSWNT 977
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
+I+G + G ++ F +L G+ PD T S+L ACS G
Sbjct: 978 MISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG 1021
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 176/387 (45%), Gaps = 33/387 (8%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM- 171
F + A A++ L L GK H I+ +G D ++ L+ MY+KCG K+FD
Sbjct: 630 FSILRHAIAASDLPL-GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688
Query: 172 -SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+ RDLV+W +++A+ A+K + LF+ ++ + + T+ V A
Sbjct: 689 DTSRDLVTWNAILSAH--ADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAA 746
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+++HGYA+ D+ + ++V +YA+ G + +AR++FD M RD++ WN M+ Y+
Sbjct: 747 ESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDT 806
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G EALLLF E + +P+ VT L ++ + +
Sbjct: 807 GLEYEALLLFSEFNRTGLRPDDVTLCTLA------------------------RVVKSKQ 842
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N + + T M++D +V +WN ++ + G +A++ F M+
Sbjct: 843 NVLEWQLKQLKAYGTKLFMYDDDDDGS-DVIAWNKTLSWFLQRGETWEAVDCFVDMINSR 901
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
V D +TF +LS + ++ G++ + + + V C+++M + G + A
Sbjct: 902 VACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRAR 961
Query: 471 DMIKQMPLPPNDSV-WGALLLACRIHG 496
+ QM D V W ++ C + G
Sbjct: 962 TVFWQM--NEVDLVSWNTMISGCALSG 986
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/586 (38%), Positives = 352/586 (60%), Gaps = 9/586 (1%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M G S+ + + + AC + EG+ VH +I + ++ LV MY +CG
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
DD V D M R +VSWT MI+ Y Q E+ EAL LF K + G + + T+ +V ++
Sbjct: 61 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
+ + + VH + F + + +S++ MYA+ N+++AR VFD + +RD++S
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
++++GY Q G EAL LF ++ + + N VT LV+A + L S G++ H I+
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ L+N+++DMY+KCG L + +F+++ ER+V SWN ++ GYG HG G + +
Sbjct: 241 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNM--LERSVVSWNAMLMGYGRHGLGHEVI 298
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDM 459
F + +E VKPD +T ++LS CSH GL+DEG F + K S HY C++D+
Sbjct: 299 SLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 357
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYF 514
LGR+G L +A ++I+ MP S+WG+LL ACR+H GE+ A L ++EPE+ G +
Sbjct: 358 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNY 417
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
V++SNIYAA+ W++V K+R+ M K + K S I K I FH+++R +P K++
Sbjct: 418 VILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDIN 477
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
K++ + V+IK AG++PDLSC LHDV+DE +E ML HSEKLA+ FG+MN P ++V
Sbjct: 478 AKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVM 537
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C DCH+ +F+S +Y R+I +RD NRFH G C+C DYW
Sbjct: 538 KNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 209/399 (52%), Gaps = 8/399 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H+ + T+ A+ LG +++ Y G + AR++ + + S W TMI Y
Sbjct: 30 RQVHARMITARY-RPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVS--WTTMISGY 86
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ VE L+L+ M R+G N YT VL +C+ I +GK VH +++T F S
Sbjct: 87 SQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHM 146
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V ++L+DMYAK + +VFD + RD+VS T +I+ Y Q EEAL LF++ E
Sbjct: 147 FVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSE 206
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + VT ++ +A+ L + + VH + + +QNS++ MY++CG + +
Sbjct: 207 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYS 266
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VFD M +R ++SWN+ML GY ++G E + LF ++ + KP+ VT L ++S C++
Sbjct: 267 RRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHG 325
Query: 326 GSRQLGRKFHGYIINSNMKIDATLR-NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
G G ++ + T ++D+ + G L+ A N+ ++ P E S W
Sbjct: 326 GLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM-PFESTPSIWG 384
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
L+ +H + E +Q L E ++P++ ILS
Sbjct: 385 SLLGACRVHANVHVG-ELVAQKLLE-MEPENAGNYVILS 421
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 260/730 (35%), Positives = 401/730 (54%), Gaps = 81/730 (11%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q H+ + SG N ++ AK+I Y+ Y N A + SI + YSF +++I A
Sbjct: 36 QAHARILKSGAQNDG-YISAKLIASYSNYNCFNDADLILQSIPDPTVYSF--SSLIYALT 92
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+++ ++S M G+ +++ P + K CA S GK +H +G D++
Sbjct: 93 KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRD------------------------------- 175
VQ +L MY +CG+ D KVFD MS +D
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212
Query: 176 ----LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+VSW +++ + ++ +EA+I+FQK G D VT+ SV +VG ++ +
Sbjct: 213 IEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGR 272
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD---MME--------------- 273
+HGY I L+D C+ ++++ MY + G+V +FD MME
Sbjct: 273 QIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNG 332
Query: 274 -----------------KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+ +++SW S++ G QNG+ EAL LF EMQ + KPN VT
Sbjct: 333 LVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIP 392
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC + + GR HG+ + ++ D + +A++DMYAKCG + ++ +FN + P+
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFN-MMPT 451
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+N+ WN L+ GY MHG ++ + F ++ +KPD I+FTS+LSAC GL DEG K
Sbjct: 452 -KNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F M++ +KP ++HY+CMV++LGRAG L EA+D+IK++P P+ VWGALL +CR+
Sbjct: 511 YFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQ 570
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
EIAA LF LEPE+ G +VLMSNIYAA W EV +R M++ GLKK S
Sbjct: 571 NNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
I+ + D+ +P ++ +K++ ++ E++ +G+ P+L AL DVE++++E ML
Sbjct: 631 IQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLW 690
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSEKLAV FG++N +QV KNLR+C DCH+ +FIS R+I +RD NRFHHF+
Sbjct: 691 GHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFK 750
Query: 671 GGTCSCNDYW 680
G CSC D+W
Sbjct: 751 DGICSCGDFW 760
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/642 (37%), Positives = 382/642 (59%), Gaps = 33/642 (5%)
Query: 47 KIIIKYTTYGE-PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG 105
KI+++ G+ P +A LF+ + + S WN+MI Y +NG L +Y M G
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRDVIS--WNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
I + T VL CA++ + GK VH I++ F L+DMY+KCG D
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+VF++M R++VSWT MI Y + + + A+ L Q+ ++EG+ D V I S+ A + G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + VH Y N +L + N+++ MYA+CG++E A VF M +D+ISWN+M+
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI- 425
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+ KP+ T ++ AC L + + G++ HGYI+ +
Sbjct: 426 --------------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSS 465
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + NA++D+Y KCG L A +F D+ PS +++ SW V+IAGYGMHG+G +A+ F++
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLF-DMIPS-KDLVSWTVMIAGYGMHGYGNEAIATFNE 523
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M + G++PD ++F SIL ACSH+GL+++G + F M +++P+++HYACMVD+L R G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSN 519
L +A++ ++ +P+ P+ ++WGALL CR + +I A +F+LEPE+TGY+VL++N
Sbjct: 584 NLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLAN 643
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN-PYWKEVYKKVE 578
IYA + KW EV +LRE + +GL+K S IE + F + + + P+ K + ++
Sbjct: 644 IYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLK 703
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
M ++K G+ P AL + ++ +E L HSEKLA+AFG++ L P ++VTKNLR
Sbjct: 704 KMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 763
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH +F+S RR+I++RD+NRFHHF+ G CSC +W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 206/474 (43%), Gaps = 85/474 (17%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
+N I + G +EL ++S + + +Y VL+ CA +GK VH I
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCQKSELETKTYGS--VLQLCAGLKSFTDGKKVHSIIK 126
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE---------- 187
D + LV YA CG +G +VFD M +++ W M++ Y
Sbjct: 127 SNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 188 ----------QAEKPEEALILFQKTQQEGLLS---------------------------- 209
+ ++PE A LF K ++S
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 210 ---DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
D TI+SV G + +AVH AI ++F + N+++ MY++CG+++ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VF+ M +R+++SW SM+ GY ++G++ A+ L +M+ K + V ++ AC G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
S G+ H YI +NM+ + + NA+MDMYAKCG ++ A ++F+ + +++ SWN +
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTM--VVKDIISWNTM 424
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I +KPD T +L AC+ ++ G++ + +
Sbjct: 425 IG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGY 463
Query: 447 KPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ +VD+ + G L A FDMI P D V W ++ +HG
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMI-----PSKDLVSWTVMIAGYGMHG 512
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/642 (37%), Positives = 381/642 (59%), Gaps = 33/642 (5%)
Query: 47 KIIIKYTTYGE-PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG 105
KI+++ G+ P +A LF+ + + S WN+MI Y +NG L +Y M G
Sbjct: 189 KIMVEKGIEGKRPESAFELFDKLCDRDVIS--WNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
I + T VL CA++ + GK VH I++ F L+DMY+KCG D
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+VF++M R++VSWT MI Y + + + A+ L Q+ ++EG+ D V I S+ A + G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + VH Y N +L + N+++ MYA+CG++E A VF M +D+ISWN+M+
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI- 425
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+ KP+ T ++ AC L + + G++ HGYI+ +
Sbjct: 426 --------------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSS 465
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + NA++D+Y KCG L A +F D+ PS +++ SW V+IAGYGMHG+G +A+ F++
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLF-DMIPS-KDLVSWTVMIAGYGMHGYGNEAIATFNE 523
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAG 464
M + G++PD ++F SIL ACSH+GL+++G + F M +++P+++HYACMVD+L R G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSN 519
L +A++ I+ +P+ P+ ++WGALL CR + +I A +F+LEPE++GY+VL++N
Sbjct: 584 NLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLAN 643
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN-PYWKEVYKKVE 578
IYA + KW EV +LRE + +GL+K S IE + F + + + P+ K + ++
Sbjct: 644 IYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLK 703
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
M ++K G+ P AL + ++ +E L HSEKLA+AFG++ L P ++VTKNLR
Sbjct: 704 KMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 763
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH +F+S RR+I++RD NRFHHF+ G CSC +W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 207/474 (43%), Gaps = 85/474 (17%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
+N I + G +EL ++S + + +Y+ VL+ CA +GK VH I
Sbjct: 69 YNAKILHFCQLGDLENAMELICMCKKSELETKTYSS--VLQLCAGLKSFTDGKKVHSIIK 126
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE---------- 187
D + LV YA CG +G +VFD M +++ W M++ Y
Sbjct: 127 SNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESIC 186
Query: 188 ----------QAEKPEEALILFQKTQQEGLLS---------------------------- 209
+ ++PE A LF K ++S
Sbjct: 187 LFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG 246
Query: 210 ---DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
D TI+SV G + +AVH AI ++F + N+++ MY++CG+++ A
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGAL 306
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VF+ M +R+++SW SM+ GY ++G++ A+ L +M+ K + V ++ AC G
Sbjct: 307 RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
S G+ H YI +NM+ + + NA+MDMYAKCG ++ A ++F+ + +++ SWN +
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTM--VVKDIISWNTM 424
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I +KPD T +L AC+ ++ G++ + +
Sbjct: 425 IG---------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGY 463
Query: 447 KPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ +VD+ + G L A FDMI P D V W ++ +HG
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMI-----PSKDLVSWTVMIAGYGMHG 512
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/588 (37%), Positives = 359/588 (61%), Gaps = 9/588 (1%)
Query: 99 STMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC 158
S++ G + + + + AC + EG+ VH +++ + Y+ L+ +Y +C
Sbjct: 30 SSLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRC 89
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
G DD V D M R++VSWT MI+ Y Q+ + EAL LF + + G ++ T+ +V
Sbjct: 90 GALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVL 149
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
++ + + + VH + F + + +S++ MY + GN+++AR VFDM+ +RD +
Sbjct: 150 TSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTV 209
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
S ++++GY Q G EAL LF ++ +S + N VT L+++ + L S G++ HG I
Sbjct: 210 SCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLI 269
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ + L+N+++DMY+KCG L + +F+++ +R+ SWN ++ GYG HG G++
Sbjct: 270 LRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNM--PQRSAISWNAMLMGYGRHGIGQE 327
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMV 457
++ F M EE VKPD +T ++LS CSH GL+DEG F + K + + HY C++
Sbjct: 328 VVQLFRTMTEE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVI 386
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTG 512
D+LGR+G L +A D+I+ MP P ++WG+LL ACR+H GE+ A L +EP + G
Sbjct: 387 DLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAG 446
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
+V++SNIYAA+ W++V ++R+ M + K A S I K I FH+++R +P K+
Sbjct: 447 NYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKD 506
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+ K++ + V++K AG++PDLSC LHDV+DE +E ML HSEKLA+ FG+MN P +Q
Sbjct: 507 INAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQ 566
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLR+C DCH+ +F+S +Y R+I +RD NRFH + G C+C DYW
Sbjct: 567 VMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 195/386 (50%), Gaps = 9/386 (2%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD + +C L RQ+H+ + + ++L ++II Y G + AR++ + +
Sbjct: 44 YDAAITACVERQALGEGRQVHAHMVKARY-RPPVYLATRLIILYVRCGALDDARNVLDGM 102
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W MI Y+ +G E LEL+ M R+G +N +T VL +C + I +
Sbjct: 103 PERNVVS--WTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQ 160
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
+ VH +++T F S +V ++L+DMY K G + KVFD + RD VS T +I+ Y Q
Sbjct: 161 VEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQ 220
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+EAL LF++ G+ + VT ++ +++ L + + VHG + + +
Sbjct: 221 LGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVL 280
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
QNS++ MY++CG + +R VFD M +R ISWN+ML GY ++G E + LF M +
Sbjct: 281 QNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEV 339
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIIN-SNMKIDATLRNAVMDMYAKCGDLDTAE 367
KP+ VT L ++S C++ G G I+ N I V+D+ + G L A
Sbjct: 340 KPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKAL 399
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMH 393
++ + P E + W L+ +H
Sbjct: 400 DLIEHM-PFEPTPAIWGSLLGACRVH 424
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 263/769 (34%), Positives = 409/769 (53%), Gaps = 112/769 (14%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTT---YGEPNTARSLFNSIHNDK 72
L +C+ L +I S + +G I+ A ++K++T + + + +F+ I N
Sbjct: 48 LHNCHNLKQFNRILSQMILTGFISDTF--AASRLLKFSTDSPFIGLDYSLQIFDRIEN-- 103
Query: 73 SYSFLWNTMIRAYANNGHCVETL-----------------------------------EL 97
S F+WNTM+RAY + + L E+
Sbjct: 104 SNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEI 163
Query: 98 YSTMRRSGISSNSYT-----------------------FPFVLKACASNSLILEGKVVHG 134
+ + + G S+ Y P VL + + NS IL G V G
Sbjct: 164 HDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESP-VLDSVSWNS-ILAGYVKKG 221
Query: 135 DIIRTGFLSDSYVQA------ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
D+ + D Q +++ + K GQ + K+F+EM +D+VSW+ +I+ YEQ
Sbjct: 222 DVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQ 281
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL++F + G+ D V +VSV SA L V + +HG I + +
Sbjct: 282 NGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNL 341
Query: 249 QNSIVAMYA-------------------------------RCGNVEKARLVFDMMEKRDL 277
QN+++ MY+ +CG+VEKAR +FD+M ++D+
Sbjct: 342 QNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDI 401
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
+SW+++++GY Q+ SE L LF EMQ +P+ + ++SACT+L + G+ H Y
Sbjct: 402 VSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAY 461
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
I + +K++ L ++DMY KCG ++ A +FN + E+ VSSWN LI G ++G
Sbjct: 462 IRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGM--EEKGVSSWNALIIGLAVNGLVE 519
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACM 456
++L+ FS+M GV P+ ITF +L AC H GL+DEGR FA M K ++P VKHY CM
Sbjct: 520 RSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCM 579
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHT 511
VD+LGRAG L EA +I+ MP+ P+ + WGALL AC+ HG E L +L+P+H
Sbjct: 580 VDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHD 639
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G+ VL+SNI+A+ W +V ++R MK +G+ K S+IE + F D+ +P+
Sbjct: 640 GFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWIN 699
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
+V + MA +KM GY PD + D+++E++E L HSEKLA+AFG++ ++P +
Sbjct: 700 KVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPI 759
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ KNLR+CNDCH+A + IS Y R+I+VRD +RFH+F+ G CSC DYW
Sbjct: 760 RIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/686 (36%), Positives = 387/686 (56%), Gaps = 51/686 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++ + LI+ + L Y G + AR+LFN + S WN M+ +
Sbjct: 111 RKVFEKMPDRDLISWNVMLSG-----YVKNGNLSAARALFNQMPEKDVVS--WNAMLSGF 163
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A NG E +++ M + N ++ +L A N I + + + + +S
Sbjct: 164 AQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVS-- 217
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ-- 203
L+ Y + + DD +FD M VRD +SW +MIT Y Q EA LF++
Sbjct: 218 --WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR 275
Query: 204 -------------QEGLLSDSVTIVSVASAVGQLG-DVLKAQAVHGYAICNAFLEDLCIQ 249
Q G+L ++ I ++ + + A V I A +L Q
Sbjct: 276 DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKA--RELFDQ 333
Query: 250 ---------NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
N++V YA+CGN+++A+++FD M +RD ISW +M++GY Q+GQ+ EAL LF
Sbjct: 334 MPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLF 393
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M+ N +S+C + + +LG++ HG ++ + + NA++ MY KC
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC 453
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G ++ A ++F DI +E+++ SWN +IAGY HG G++AL F M + +KPD +T
Sbjct: 454 GSIEEAFDVFEDI--TEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVG 510
Query: 421 ILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSACSH G +D+G + F M + + KHY CM+D+LGRAG L EA +++K MP
Sbjct: 511 VLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 480 PNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P+ + WGALL A RIHG E AA +F++EP+++G +VL+SN+YAAS +WREV ++R
Sbjct: 571 PDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMR 630
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
M++KG+KK +S +E F D +P + +Y +E + +E+K G++
Sbjct: 631 SKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTK 690
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
LHDVE+E++EHML YHSEKLAVAFGI+++ P ++V KNLRVC DCH+A + IS I
Sbjct: 691 LVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKIT 750
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
+R+IIVRD+NRFHHF G+CSC DYW
Sbjct: 751 QRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 200/476 (42%), Gaps = 110/476 (23%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN I AY G C L +++ MRR S+ +Y N++I
Sbjct: 63 WNRKISAYMRKGQCESALSVFNGMRRR--STVTY-----------NAMI----------- 98
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+G+LS++ A KVF++M RDL+SW VM++ Y + A
Sbjct: 99 -SGYLSNNKFDCAR--------------KVFEKMPDRDLISWNVMLSGYVKNGNLSAARA 143
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC---------------NAF 242
LF + ++ D V+ ++ S Q G V +A+ + + N
Sbjct: 144 LFNQMPEK----DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGR 199
Query: 243 LED------------LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ED + N ++ Y R ++ AR +FD M RD ISWN M+TGY QN
Sbjct: 200 IEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQN 259
Query: 291 GQASEALLLFDEMQNSDC---------------------------KPNPVTALILVSACT 323
G SEA LF+E+ D + N V+ +++
Sbjct: 260 GLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAG-- 317
Query: 324 YLGSRQL--GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
Y+ S+Q+ R+ + + N + N ++ YA+CG++D A+ +F+++ +R+
Sbjct: 318 YVQSQQIEKARELFDQMPSRN----TSSWNTMVTGYAQCGNIDQAKILFDEM--PQRDCI 371
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SW +I+GY G +AL F +M +G + LS+C+ ++ G++ +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRL 431
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
K + ++ M G+ G + EAFD+ + + D V W ++ HG
Sbjct: 432 VKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED--ITEKDIVSWNTMIAGYARHG 485
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 179/421 (42%), Gaps = 71/421 (16%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ Y + GQ + VF+ M R V++ MI+ Y K + A +F+K L+S
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLIS-- 124
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
N +++ Y + GN+ AR +F+
Sbjct: 125 -------------------------------------WNVMLSGYVKNGNLSAARALFNQ 147
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M ++D++SWN+ML+G+ QNG EA +FD+M N ++ L+SA G +
Sbjct: 148 MPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDA 203
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
R+ + +S M + N +M Y + LD A ++F D P R+ SWN++I GY
Sbjct: 204 RR----LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLF-DRMPV-RDKISWNIMITGYA 257
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
+G +A F EE D +T+++S G++DE + F +M + K EV
Sbjct: 258 QNGLLSEARRLF----EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE---KNEVS 310
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-AANYLFQLEPEH 510
+ M+ ++ + +A ++ QMP N S W ++ G I A LF P+
Sbjct: 311 -WNAMIAGYVQSQQIEKARELFDQMP-SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQR 368
Query: 511 TGY-FVLMSNIYAASNKWREVGKLREDMKNKG-----------LKKPAAFSVIEYGKDIQ 558
+ M + YA S + E L MK G L A + +E GK +
Sbjct: 369 DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLH 428
Query: 559 G 559
G
Sbjct: 429 G 429
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/669 (36%), Positives = 392/669 (58%), Gaps = 23/669 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H + +GL + + + ++ Y G +A +F + S WNT+I A
Sbjct: 399 RVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRIS--WNTIISAL 456
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NG+C E + YS MR+S IS +++ L +CA L+ G+ VH D ++ G D+
Sbjct: 457 DQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDT 516
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP-EEALILFQKTQQ 204
V LV MY +CG D KVF+ M+ D VSW M+ ++ P E + +F +
Sbjct: 517 SVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMR 576
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
GL+ + VT +++ +A+ L + + VH + + +ED + N++++ YA+ G++
Sbjct: 577 GGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGS 636
Query: 265 ARLVF-DMMEKRDLISWNSMLTGYIQNGQASEAL----LLFDEMQNSDCKPNPVTALILV 319
+F +M ++RD ISWNSM++GYI NG EA+ L+ Q DC T I++
Sbjct: 637 CEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDC----CTFSIIL 692
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+AC + + + G + H + I S+++ D + +A++DMY+KCG +D A +FN + ++RN
Sbjct: 693 NACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM--TQRN 750
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
SWN +I+GY HG GRKA+E F +ML PDH+TF S+LSACSHAGL++ G + F
Sbjct: 751 EFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFE 810
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH---- 495
M + P+++HY+C++D+LGRAG + + + I++MP+ PN +W +L+ACR
Sbjct: 811 MMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGS 870
Query: 496 ----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
G A+ L ++EP++ +VL SN +AA+ W + K R M+ KK A S +
Sbjct: 871 NIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWV 930
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
+ F DR +P KE+Y+K+ + I+ AGY+P AL+D+E+E++E +L+Y
Sbjct: 931 TLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLSY 990
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSEKLA+AF ++ + +++ KNLRVC DCH AFR+IS + R+II+RD+ RFHHF+
Sbjct: 991 HSEKLAIAF-VLTRSSSGPIRIMKNLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFKD 1049
Query: 672 GTCSCNDYW 680
G CSC DYW
Sbjct: 1050 GKCSCGDYW 1058
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 203/409 (49%), Gaps = 26/409 (6%)
Query: 54 TYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG----ISSN 109
T G P A+ +F+ + WN ++ YA G T L+ M+R +
Sbjct: 216 TVGPPILAQRVFDGTPIRDLIT--WNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPT 273
Query: 110 SYTFPFVLK---ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
+TF ++ + +S +L+ +V ++++G SD YV +ALV +A+ G TD+
Sbjct: 274 EHTFGSLITAASLSSGSSAVLDQVLVW--VLKSGCSSDLYVGSALVSAFARHGLTDEAKD 331
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG- 225
+F + ++ V+ +I + + EEA+ +F T+ + ++ T V + SA+ +
Sbjct: 332 IFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYSI 390
Query: 226 ---DVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+ + VHG+ + + + + N +V MYA+CG +E A +F +ME D ISWN
Sbjct: 391 SEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWN 450
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
++++ QNG EA++ + M+ S P+ + +S+C L G++ H +
Sbjct: 451 TIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKW 510
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL- 400
+ +D ++ N ++ MY +CG + +FN + +E + SWN ++ G+ + +
Sbjct: 511 GLDLDTSVSNVLVKMYGECGAMSDYWKVFNSM--AEHDEVSWNTMM---GVMASSQTPIS 565
Query: 401 ---EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
+ F+ M+ G+ P+ +TF ++L+A S +++ G++ A + K V
Sbjct: 566 EIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGV 614
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 152/318 (47%), Gaps = 17/318 (5%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++I+ G D ++ LV+ YAK + +VFDEM R+ VSWT +++ Y
Sbjct: 83 LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142
Query: 192 PEEALILFQ---KTQQEGLLSDSVTIVSVASAVGQLG-DVLK-AQAVHGYAICNAFLEDL 246
EEA +F+ + Q G S T ++ A G D L A VHG + +
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202
Query: 247 CIQNSIVAMYARC--GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ N++++MY C G A+ VFD RDLI+WN++++ Y + G + LF +MQ
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262
Query: 305 NSDC----KPNPVT--ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
D +P T +LI ++ + S L + +++ S D + +A++ +A
Sbjct: 263 RGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVL-VWVLKSGCSSDLYVGSALVSAFA 321
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+ G D A+++F + ++N + N LI G +A++ F V + T+
Sbjct: 322 RHGLTDEAKDIF--LSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGT-RNTVDVNADTY 378
Query: 419 TSILSACSHAGLIDEGRK 436
+LSA + + +EG +
Sbjct: 379 VVLLSALAEYSISEEGLR 396
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
GD + +H I DL + N +V YA+ + A VFD M +R+ +SW ++
Sbjct: 75 GDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLV 134
Query: 285 TGYIQNGQASEALLLFDEMQ---NSDCKPNPVTALILVSACTYLGSRQLG--RKFHGYII 339
+GY+ +G A EA +F M + C+P T L+ AC G +LG + HG +
Sbjct: 135 SGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVS 194
Query: 340 NSNMKIDATLRNAVMDMYAKC--GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ + T+ NA++ MY C G A+ +F+ R++ +WN L++ Y G
Sbjct: 195 KTEYASNTTVCNALISMYGSCTVGPPILAQRVFDG--TPIRDLITWNALMSVYAKKGDVA 252
Query: 398 KALEFFSQMLEEG-----VKPDHITFTSILS 423
F M + G ++P TF S+++
Sbjct: 253 STFTLFKDM-QRGDSRIQLRPTEHTFGSLIT 282
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/654 (37%), Positives = 382/654 (58%), Gaps = 27/654 (4%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
L + + ++ Y+ G AR LF++ N+K+ WN+MI Y+ + EL M
Sbjct: 334 LKVNSSLLDMYSKCGYLCEARVLFDT--NEKNV-ISWNSMIGGYSKDRDFRGAFELLRKM 390
Query: 102 R-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL-SDSYVQAALVDMYAKCG 159
+ + N T VL C L+ K +HG +R GF+ SD V A V YAKCG
Sbjct: 391 QMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCG 450
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
VF M + + SW +I + Q P +AL L+ + GL D TI S+ S
Sbjct: 451 SLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLS 510
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
A +L + + +HG + N F D I S+V++Y +CG + A+L FD ME+++L+
Sbjct: 511 ACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVC 570
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN+M+ G+ QN +AL +F +M +S P+ ++ + + AC+ + + +LG++ H + +
Sbjct: 571 WNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAV 630
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
S++ + + +++DMYAKCG ++ ++N+F+ +H + +WNVLI GYG+HGHGRKA
Sbjct: 631 KSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHL--KGEVTWNVLITGYGIHGHGRKA 688
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
+E F M G +PD +TF ++L+AC+HAGL+ EG + M L +KP+++HYAC+VD
Sbjct: 689 IELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVD 748
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
MLGRAG L EA +++ ++P P+ +W +LL +CR + GE AN L +L P+
Sbjct: 749 MLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAEN 808
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD-------RV 566
+VL+SN YA KW EV K+R+ MK GL+K A S IE G + F D ++
Sbjct: 809 YVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKI 868
Query: 567 NPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLT 626
W E+ KK+ + GY PD SC LH++E++++ +L HSEKLA++FG++N
Sbjct: 869 QQTWIELEKKINKI-------GYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTA 921
Query: 627 PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLR+C DCH+A + +S I +R+IIVRD RFHHF+ G CSC DYW
Sbjct: 922 KGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 222/423 (52%), Gaps = 10/423 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH+ ++TS + L +++ Y+ P + +FN+ + + FLWN ++ Y
Sbjct: 113 RKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNA--SRRKNLFLWNALLSGY 170
Query: 86 ANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
N + + ++ M + +++T P V+KAC + G+ VHG ++T LSD
Sbjct: 171 LRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSD 230
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK--T 202
+V AL+ MY K G + KVFD+M R+LVSW ++ A + EE+ LF+
Sbjct: 231 VFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLN 290
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
EGL+ D T+V+V + G+V HG A+ +L + +S++ MY++CG +
Sbjct: 291 GDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYL 350
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CKPNPVTALILVSA 321
+AR++FD EK ++ISWNSM+ GY ++ A L +MQ D K N VT L ++
Sbjct: 351 CEARVLFDTNEK-NVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPV 409
Query: 322 CTYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
C ++ HGY + ++ D + NA + YAKCG L AE +F + + V
Sbjct: 410 CEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGM--ESKMV 467
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
SSWN LI G+ +G RKAL+ + M G++PD T S+LSAC+ + G++
Sbjct: 468 SSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGS 527
Query: 441 MTK 443
M +
Sbjct: 528 MLR 530
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 212/428 (49%), Gaps = 9/428 (2%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
L++IH G I + + Y G + A +F + + S WN +I
Sbjct: 419 LKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSS--WNALIGG 476
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ NG + L+LY MR SG+ + +T +L ACA + GK +HG ++R GF D
Sbjct: 477 HVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELD 536
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
++ +LV +Y +CG+ FD M ++LV W MI + Q E P +AL +F +
Sbjct: 537 EFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLS 596
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+ D ++I+ A Q+ + + +H +A+ + E + S++ MYA+CG +E+
Sbjct: 597 SKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQ 656
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
++ +FD + + ++WN ++TGY +G +A+ LF MQN+ +P+ VT + L++AC +
Sbjct: 657 SQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNH 716
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
G G ++ G + S I L + V+DM + G L+ A + N++ P + +
Sbjct: 717 AGLVAEGLEYLGQ-MQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNEL-PDKPDSRI 774
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI-TFTSILSACSHAGLIDEGRKCFADM 441
W+ L++ + + +++LE G PD + I + + G DE RK M
Sbjct: 775 WSSLLSSCRNYRDLDIGEKVANKLLELG--PDKAENYVLISNFYARLGKWDEVRKMRQRM 832
Query: 442 TKLSVKPE 449
++ ++ +
Sbjct: 833 KEIGLQKD 840
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 164/316 (51%), Gaps = 8/316 (2%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTG-FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
+L+ C I G+ +H I + F +D + LV MY+ C D C VF+
Sbjct: 98 LLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRR 157
Query: 174 RDLVSWTVMITAYEQAEKPEEALILF-QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
++L W +++ Y + +A+ +F + + D+ T+ V A + DV +A
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
VHG+A+ L D+ + N+++AMY + G VE A VFD M +R+L+SWNS++ ++NG
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 293 ASEALLLFDEMQNSD--CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
E+ LF + N D P+ T + ++ C G +LG FHG + + + +
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM-LEE 409
++++DMY+KCG L A +F+ +E+NV SWN +I GY R A E +M +E+
Sbjct: 338 SSLLDMYSKCGYLCEARVLFD---TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMED 394
Query: 410 GVKPDHITFTSILSAC 425
VK + +T ++L C
Sbjct: 395 KVKVNEVTLLNVLPVC 410
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 132/252 (52%), Gaps = 6/252 (2%)
Query: 222 GQLGDVLKAQAVHGY-AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
G+ ++ + +H + + F D+ + +V MY+ C + + LVF+ +++L W
Sbjct: 104 GEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLW 163
Query: 281 NSMLTGYIQNGQASEALLLFDEMQN-SDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
N++L+GY++N +A+ +F EM + ++ P+ T ++ AC + +LG HG+ +
Sbjct: 164 NALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFAL 223
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ + D + NA++ MY K G +++A +F+ + +RN+ SWN ++ +G ++
Sbjct: 224 KTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKM--PQRNLVSWNSVMYACLENGVFEES 281
Query: 400 LEFFSQML--EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
F +L +EG+ PD T +++ C+ G + G KL + E+K + ++
Sbjct: 282 YGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLL 341
Query: 458 DMLGRAGCLYEA 469
DM + G L EA
Sbjct: 342 DMYSKCGYLCEA 353
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMY 357
L D + +S+ KP + L+L C + ++GRK H +I S + + D L ++ MY
Sbjct: 81 LNDVVSSSNSKPKQLIGLLL-QLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMY 139
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM--LEEGVKPDH 415
+ C + +FN +N+ WN L++GY + R A+ F +M L E V PD+
Sbjct: 140 SICDSPYDSCLVFNA--SRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFV-PDN 196
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
T ++ AC + G K V +V ++ M G+ G + A + +
Sbjct: 197 FTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDK 256
Query: 476 MPLPPNDSVWGALLLACRIHGEIAANY 502
MP N W +++ AC +G +Y
Sbjct: 257 MP-QRNLVSWNSVMYACLENGVFEESY 282
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/613 (39%), Positives = 364/613 (59%), Gaps = 17/613 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN +R A H E L LY M SG S N++TFPF K+CAS SL L G +HG +I
Sbjct: 24 WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE-MSVRDL-VSWTVMITAYEQAEKPEEA 195
+TG + +VQ +L+ MY KC KVFDE R+L V + +I Y + +A
Sbjct: 84 KTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDA 143
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
++LF++ ++EG+ ++VT++ + + ++H ++ DL + N ++ M
Sbjct: 144 VLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTM 203
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y RCG+V+ AR +FD M ++ LI+WN+M++GY QNG A L L+ +M+ + P+PVT
Sbjct: 204 YVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTL 263
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ ++S+C +LG+ GR+ I S + L+NA+++MYA+CG+L A +F+ +
Sbjct: 264 VGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGM-- 321
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+E+NV SW +IAGYGMHG G A++ F +M+ PD F S+LSACSHAGL ++G
Sbjct: 322 TEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGL 381
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
F M + ++P +HY+C+VD+LGRAG L EA +I M + P+ +VWGALL AC+I
Sbjct: 382 YYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKI 441
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H E+A + + EP + GY+VL+SNI++ + + ++R M+ + LKK S
Sbjct: 442 HRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCS 501
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM- 608
+EY I F DR +P +E+Y ++ + IK G D +D E + E +
Sbjct: 502 YVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSND-----NDQESRNEELIT 556
Query: 609 -LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
+ HSEKLA+AFG++N P + V KNLRVC DCH + +S I R+++VRDA RFH
Sbjct: 557 GMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFH 616
Query: 668 HFEGGTCSCNDYW 680
HF+ G CSC DYW
Sbjct: 617 HFKNGVCSCKDYW 629
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 209/417 (50%), Gaps = 18/417 (4%)
Query: 16 LKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
KSC L+ + Q+H + +G + + +I Y +AR +F+ H+ +
Sbjct: 63 FKSCASLSLPLAGSQLHGHVIKTGCEPEPF-VQTSLISMYCKCSTIASARKVFDENHHSR 121
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+ + +N +I Y+ N + + L+ MR+ G+S N+ T ++ CA + G +
Sbjct: 122 NLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSL 181
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H +R G D V L+ MY +CG D K+FD M + L++W MI+ Y Q
Sbjct: 182 HACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLA 241
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
L L++K + G++ D VT+V V S+ LG + V + F + ++N++
Sbjct: 242 GHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNAL 301
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ MYARCGN+ KAR +FD M ++++ISW +++ GY +GQ A+ LFDEM +SD P+
Sbjct: 302 INMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDG 361
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR------NAVMDMYAKCGDLDTA 366
+ ++SAC++ G + G + + M+ D L+ + V+D+ + G L+ A
Sbjct: 362 AAFVSVLSACSHAGLTEKGLYYF-----TAMERDYGLQPGPEHYSCVVDLLGRAGRLEEA 416
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ + E + + W L+ +H + A F +++E +P +I + +LS
Sbjct: 417 RKLIGSM-SVEPDGAVWGALLGACKIHRNVELAELAFEKVIE--FEPTNIGYYVLLS 470
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 9/324 (2%)
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
SW + + +EAL L+ + G ++ T + L L +HG+
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM-MEKRDL-ISWNSMLTGYIQNGQASE 295
I + +Q S+++MY +C + AR VFD R+L + +N+++ GY N + S+
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
A+LLF +M+ N VT L L+ C G H + + D ++ N ++
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY +CG +D A +F+ + E+ + +WN +I+GY +G L+ + +M G+ PD
Sbjct: 203 MYVRCGSVDFARKLFDGM--PEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDP 260
Query: 416 ITFTSILSACSHAGLIDEGRKC--FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+T +LS+C+H G GR+ +++ P +K+ +++M R G L +A +
Sbjct: 261 VTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAIF 318
Query: 474 KQMPLPPNDSVWGALLLACRIHGE 497
M N W A++ +HG+
Sbjct: 319 DGMT-EKNVISWTAIIAGYGMHGQ 341
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 259/696 (37%), Positives = 404/696 (58%), Gaps = 28/696 (4%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
R+ P+ F +LK+C+ L LR IH+ +GL + L + +I Y
Sbjct: 95 RVAPNKYTF-PFVLKACSALVDLRAGRTIHAHAAAAGL-HTDLFVSTALIDLYIRCARFG 152
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNG---HCVETLELYSTMRRSGISSNSYTFPFV 116
AR++F + + WN M+ YAN+G H + L G+ N+ T +
Sbjct: 153 PARNVFAKMPMRDVVA--WNAMLAGYANHGMYHHAIA--HLLDMQDHGGLRPNASTLVSL 208
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDS---YVQAALVDMYAKCGQTDDGCKVFDEMSV 173
L A + + +G +H +R + + AL+DMYAKC Q C+VF M V
Sbjct: 209 LPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPV 268
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV---GQLGDVLKA 230
R+ V+W+ +I + ++ EA LF+ EGL S T SVASA+ L D+
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSAT--SVASALRVCASLADLHMG 326
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+H + DL NS+++MYA+ G + +A + FD + +D IS+ ++L+G +QN
Sbjct: 327 TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN 386
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+A EA L+F +MQ + +P+ T + L+ AC++L + Q G+ HG +I + ++ ++
Sbjct: 387 GKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSIC 446
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N+++DMYAKCG +D + +F+ + R+V SWN +IAGYG+HG G++A F M +G
Sbjct: 447 NSLIDMYAKCGKIDLSRQVFDKM--PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQG 504
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEA 469
PD +TF +++ACSH+GL+ EG+ F MT K + P ++HY CMVD+L R G L EA
Sbjct: 505 FAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEA 564
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAAS 524
+ I+ MPL + VWGALL ACRIH G+ + + +L PE TG FVL+SNI++A+
Sbjct: 565 YQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAA 624
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
++ E ++R K KG KK +S IE + F D+ +P +++Y +++++ V+I
Sbjct: 625 GRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDI 684
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K GY D S L D+E+E++E L YHSEKLA+AFG+++L + + VTKNLRVC DCH
Sbjct: 685 KKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCH 744
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A ++++ + R IIVRD NRFHHF+ G CSC ++W
Sbjct: 745 TAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 228/477 (47%), Gaps = 25/477 (5%)
Query: 51 KYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNS 110
++ + G+ AR +F+ I + ++ N +IRAY+ G ++LY +M R ++ N
Sbjct: 43 QHISRGQLALARQVFDRIPAPDARAY--NALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
YTFPFVLKAC++ + G+ +H G +D +V AL+D+Y +C + VF +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALI-LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
M +RD+V+W M+ Y A+ L GL ++ T+VS+ + Q G + +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 230 AQAVHGY---AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
++H Y A E + I +++ MYA+C + A VF M R+ ++W++++ G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280
Query: 287 YIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
++ + +EA LF +M C + + + C L +G + H I S +
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D T N+++ MYAK G ++ A F++I + ++ S+ L++G +G +A F +
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEI--AVKDTISYGALLSGCVQNGKAEEAFLVFKK 398
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M ++PD T S++ ACSH + G+ + + E ++DM + G
Sbjct: 399 MQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCG- 457
Query: 466 LYEAFDMIKQM--PLPPNDSV-WGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSN 519
D+ +Q+ +P D V W ++ IHG L E T F+ M N
Sbjct: 458 ---KIDLSRQVFDKMPARDVVSWNTMIAGYGIHG---------LGKEATTLFLGMKN 502
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/686 (35%), Positives = 395/686 (57%), Gaps = 13/686 (1%)
Query: 2 RRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTA 61
+RL P + + +L+ L L+QIH+ + TSGL + L ++ Y G A
Sbjct: 18 QRLSPLAQP-HASILRKLKDLKPLQQIHAQIITSGLTHNTF-LSNSLMNAYVYCGLLADA 75
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
+ +F+ H W +I A N VE ++++ M N+ T VL A A
Sbjct: 76 KQIFH--HTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFA 133
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
+ LI K VH +R GF + +V+ ALVDMY+K G ++F+ MS R++V+W
Sbjct: 134 NLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNA 193
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+++ Y EEA+ LF +++GLL D TI+S+ A +G + +HG+ I
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG 253
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
+ D I+ +++ +Y V+ A VF M +D+ +W MLTG+ A+ F+
Sbjct: 254 YENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFN 313
Query: 302 EMQN-SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M + K + + + ++S+C++ G+ Q GR+ H I + + + +AV+DMYA C
Sbjct: 314 KMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANC 373
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G+L+ A+ F + E++V WN +IAG GM+G+G A++ F QM G+ PD TF S
Sbjct: 374 GNLEDAKRFFYGM--GEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431
Query: 421 ILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+L ACSHAG++ EG + F M K S V P ++HYAC++D+LGRAG L A+ I MP
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491
Query: 480 PNDSVWGALLLACRIHGEIAANY-----LFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P+ V+ LL ACRIHG I + +F++EP GY+VL+SN+YA + W V R
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
+++K +KK FS IE ++I F ++ +P + ++ ++ + ++IK AGY+P+ +
Sbjct: 552 ASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
L DV D+ ++ +L +HSEK+A+AFG+M PE ++++TKNLR C+DCH+A +F+S ++
Sbjct: 612 VLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVF 671
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R ++++DANRFH F+ G CSC DYW
Sbjct: 672 GRVLVIKDANRFHVFQDGVCSCRDYW 697
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/672 (36%), Positives = 380/672 (56%), Gaps = 38/672 (5%)
Query: 43 HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
+L ++ Y E AR LF+ + + W MI YA G E+L L+ MR
Sbjct: 194 NLQMALVDMYVKCREIEDARFLFDKMQERDLVT--WTVMIGGYAECGKANESLVLFEKMR 251
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
G+ + V+ ACA + + +++ I R F D + A++DMYAKCG +
Sbjct: 252 EEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVE 311
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
++FD M ++++SW+ MI AY + +AL LF+ G+L D +T+ S+ A
Sbjct: 312 SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACI 371
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
++ + + VH A + L++L + N +V Y+ ++ A +FD M RD +SW+
Sbjct: 372 NCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSV 431
Query: 283 MLTGYIQNG----------------------------QASEALLLFDEMQNSDCKPNPVT 314
M+ G+ + G A+E+L+LFD+M+ P+ V
Sbjct: 432 MVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVA 491
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+ +V AC LG+ R YI ++D L A++DM+AKCG +++A +F+ +
Sbjct: 492 MVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM- 550
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
E+NV SW+ +IA YG HG GRKAL+ F ML G+ P+ IT S+L ACSHAGL++EG
Sbjct: 551 -EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 609
Query: 435 RKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
+ F+ M + SV+ +VKHY C+VD+LGRAG L EA +I+ M + ++ +WGA L ACR
Sbjct: 610 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACR 669
Query: 494 IHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
H ++ AA L +L+P++ G+++L+SNIYA + +W +V K R+ M + LKK +
Sbjct: 670 THKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGW 729
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
+ IE F D +P KE+Y+ ++S+ ++++ GY+PD + LHDV++E + +
Sbjct: 730 TWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGI 789
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
L HSEKLA+AFG++ +++ KNLRVC DCH+ + +S I R IIVRDANRFHH
Sbjct: 790 LYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHH 849
Query: 669 FEGGTCSCNDYW 680
F+ G CSC DYW
Sbjct: 850 FKEGACSCGDYW 861
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 257/525 (48%), Gaps = 58/525 (11%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
++RL P FY L +C L +RQ+H+ + G++ + + K+I Y+ Y +
Sbjct: 76 LQRLNPK---FYISALVNCRNLTQVRQVHAQASVHGMLENIV-VANKLIYFYSYYRALDD 131
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF+ + S S W+ M+ +A G + + + R G ++YT PFV++AC
Sbjct: 132 AYGLFDGMCVRDSVS--WSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC 189
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
D+ +Q ALVDMY KC + +D +FD+M RDLV+WT
Sbjct: 190 R-------------DL--------KNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWT 228
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
VMI Y + K E+L+LF+K ++EG++ D V +V+V A +LG + KA+ + Y
Sbjct: 229 VMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRK 288
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F D+ + +++ MYA+CG VE AR +FD ME++++ISW++M+ Y +GQ +AL LF
Sbjct: 289 KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 348
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
M +S P+ +T L+ AC + R+ H M + + N ++ Y+
Sbjct: 349 RMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYY 408
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYG----------------------------M 392
LD A +F+ + R+ SW+V++ G+
Sbjct: 409 RALDDAYGLFDGM--CVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPF 466
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
G+ ++L F +M EEGV PD + +++ AC+ G + + R + + + +V
Sbjct: 467 CGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVIL 526
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
M+DM + GC+ A ++ +M N W A++ A HG+
Sbjct: 527 GTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 570
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 259/696 (37%), Positives = 404/696 (58%), Gaps = 28/696 (4%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
R+ P+ F +LK+C+ L LR IH+ +GL + L + +I Y
Sbjct: 95 RVAPNKYTF-PFVLKACSALVDLRAGRTIHAHAAAAGL-HTDLFVSTALIDLYIRCARFG 152
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNG---HCVETLELYSTMRRSGISSNSYTFPFV 116
AR++F + + WN M+ YAN+G H + L G+ N+ T +
Sbjct: 153 PARNVFAKMPMRDVVA--WNAMLAGYANHGMYHHAIA--HLLDMQDHGGLRPNASTLVSL 208
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDS---YVQAALVDMYAKCGQTDDGCKVFDEMSV 173
L A + + +G +H +R + + AL+DMYAKC Q C+VF M V
Sbjct: 209 LPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPV 268
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV---GQLGDVLKA 230
R+ V+W+ +I + ++ EA LF+ EGL S T SVASA+ L D+
Sbjct: 269 RNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSAT--SVASALRVCASLADLHMG 326
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+H + DL NS+++MYA+ G + +A + FD + +D IS+ ++L+G +QN
Sbjct: 327 TQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQN 386
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+A EA L+F +MQ + +P+ T + L+ AC++L + Q G+ HG +I + ++ ++
Sbjct: 387 GKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSIC 446
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N+++DMYAKCG +D + +F+ + R+V SWN +IAGYG+HG G++A F M +G
Sbjct: 447 NSLIDMYAKCGKIDLSRQVFDKM--PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQG 504
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEA 469
PD +TF +++ACSH+GL+ EG+ F MT K + P ++HY CMVD+L R G L EA
Sbjct: 505 FAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEA 564
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAAS 524
+ I+ MPL + VWGALL ACRIH G+ + + +L PE TG FVL+SNI++A+
Sbjct: 565 YQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAA 624
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
++ E ++R K KG KK +S IE + F D+ +P +++Y +++++ V+I
Sbjct: 625 GRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDI 684
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K GY D S L D+E+E++E L YHSEKLA+AFG+++L + + VTKNLRVC DCH
Sbjct: 685 KKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCH 744
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A ++++ + R IIVRD NRFHHF+ G CSC ++W
Sbjct: 745 TAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 228/477 (47%), Gaps = 25/477 (5%)
Query: 51 KYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNS 110
++ + G+ AR +F+ I + ++ N +IRAY+ G ++LY +M R ++ N
Sbjct: 43 QHISRGQLALARQVFDRIPAPDARAY--NALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
YTFPFVLKAC++ + G+ +H G +D +V AL+D+Y +C + VF +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALI-LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
M +RD+V+W M+ Y A+ L GL ++ T+VS+ + Q G + +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 230 AQAVHGY---AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
++H Y A E + I +++ MYA+C + A VF M R+ ++W++++ G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280
Query: 287 YIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
++ + +EA LF +M C + + + C L +G + H I S +
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D T N+++ MYAK G ++ A F++I + ++ S+ L++G +G +A F +
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEI--AVKDTISYGALLSGCVQNGKAEEAFLVFKK 398
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M ++PD T S++ ACSH + G+ + + E ++DM + G
Sbjct: 399 MQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCG- 457
Query: 466 LYEAFDMIKQM--PLPPNDSV-WGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSN 519
D+ +Q+ +P D V W ++ IHG L E T F+ M N
Sbjct: 458 ---KIDLSRQVFDKMPARDVVSWNTMIAGYGIHG---------LGKEATTLFLGMKN 502
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/671 (36%), Positives = 385/671 (57%), Gaps = 42/671 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGI 106
I+ Y+ G + + +FN + S WN I YAN G C + + +Y M + + +
Sbjct: 77 ILSVYSKLGLLSQMQQIFNLMPFRDGVS--WNLAISGYANYGSCSDAVRVYKLMLKDAAM 134
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
+ N TF +L C+ + G+ ++G I++ GF SD +V + LVDMY K G D +
Sbjct: 135 NLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194
Query: 167 VFDEM-------------------------------SVRDLVSWTVMITAYEQAEKPEEA 195
FDEM RD +SWT+MIT Q EA
Sbjct: 195 YFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREA 254
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
L +F++ + G D T SV +A G L + + + +H Y I +++ + +++V M
Sbjct: 255 LDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDM 314
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y++C +++ A VF M ++++ISW +ML GY QNG + EA+ +F EMQ + +P+ T
Sbjct: 315 YSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTL 374
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++S+C L S + G +FH + S + T+ NA++ +Y KCG + + +F +++
Sbjct: 375 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNI 434
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
R+ SW L+AGY G + + F +ML G+KPD +TF +LSACS AGL+++G
Sbjct: 435 --RDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGL 492
Query: 436 KCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F M K + P V H C++D+LGRAG L EA + I MP P+ W LL +CR+
Sbjct: 493 QYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRV 552
Query: 495 HGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
HG++ AA+ L LEP++ +VL+S++YA+ KW +V +LR M++K ++K +S
Sbjct: 553 HGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYS 612
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
I+Y + F D+ +P+ ++Y ++E + ++ GY+PD+S LHDVE+ ++ ML
Sbjct: 613 WIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKML 672
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
N+HSEKLA+AFG++ + P ++V KNLRVC DCH+A +FIS I +R+I+VRDA RFH F
Sbjct: 673 NHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLF 732
Query: 670 EGGTCSCNDYW 680
+ GTCSC D+W
Sbjct: 733 KDGTCSCGDFW 743
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 169/372 (45%), Gaps = 50/372 (13%)
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
K LIL Q E LS+++ +A +LG++ A V + +L N
Sbjct: 25 KKLHCLILKTIKQPETFLSNNLI-----TAYYKLGNLAYAHHVFDHIP----QPNLFSWN 75
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCK 309
+I+++Y++ G + + + +F++M RD +SWN ++GY G S+A+ ++ M +++
Sbjct: 76 TILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMN 135
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N +T ++ C+ LGR+ +G I+ D + + ++DMY K G + A+
Sbjct: 136 LNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRY 195
Query: 370 FNDIHP-----------------------------SERNVSSWNVLIAGYGMHGHGRKAL 400
F+++ ER+ SW ++I G +G R+AL
Sbjct: 196 FDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREAL 255
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
+ F +M G D TF S+L+AC + EG++ A + + K V + +VDM
Sbjct: 256 DMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMY 315
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG--EIAANYLFQL-----EPEHTGY 513
+ + A + K+MP N W A+L+ +G E A F++ EP+
Sbjct: 316 SKCRSIKSAETVFKRMP-QKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDD--- 371
Query: 514 FVLMSNIYAASN 525
F L S I + +N
Sbjct: 372 FTLGSVISSCAN 383
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/665 (37%), Positives = 370/665 (55%), Gaps = 34/665 (5%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYS----FLWNTMIRAYANNGHCVETLELYSTMRR 103
++ Y G + A+SLF + S WNTMI G C E +E+ M
Sbjct: 216 LLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVS 275
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTD 162
G+ + TF L AC+ ++ G+ +H +++ L+ +S+V +ALVDMYA +
Sbjct: 276 LGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVA 335
Query: 163 DGCKVFDEMS--VRDLVSWTVMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVAS 219
+VFD + R L W MI Y QA EEAL LF + + E G T+ V
Sbjct: 336 SARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLP 395
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
A + +A+HGY + + +QN+++ MYAR G ++ AR +F M++ RD++S
Sbjct: 396 ACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVS 455
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQ----------------NSDCKPNPVTALILVSACT 323
WN+++TG + G A+EA L EMQ C PN +T + L+ C
Sbjct: 456 WNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCA 515
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + G++ HGY + ++ D + +A++DMYAKCG L + +F+ + RNV +W
Sbjct: 516 ALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRL--PRRNVITW 573
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
NVLI YGMHG G +A+ F +M G P+ +TF + L+ACSH+GL+D G + F M
Sbjct: 574 NVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGME 633
Query: 443 K-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM-PLPPNDSVWGALLLACRIH----- 495
+ VKP +AC+VD+LGRAG L EA+ +I M P S W +LL ACR+H
Sbjct: 634 RDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVEL 693
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
GE+AA LF+LEP ++VL+ NIY+A+ W + +R M+ +G+ K S IE
Sbjct: 694 GEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDG 753
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
I F + +P EV+ ++++ ++ GY PD SC LHDV+++++ ML YHSEK
Sbjct: 754 AIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEK 813
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AFG++ P A ++V KNLRVCNDCH A +F+S + R I++RD RFHHF G+CS
Sbjct: 814 LAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCS 873
Query: 676 CNDYW 680
C DYW
Sbjct: 874 CGDYW 878
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 232/475 (48%), Gaps = 30/475 (6%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M LG +G + L +C+ L L R++H+ + + + + ++ Y
Sbjct: 273 MVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNE 332
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPF 115
+ +AR +F+ + +WN MI YA G E LEL+S M +G + + T
Sbjct: 333 KVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSG 392
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
VL ACA + + +HG +++ G + +VQ AL+DMYA+ G+ D ++F + RD
Sbjct: 393 VLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRD 452
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQ------------QEG----LLSDSVTIVSVAS 219
+VSW +IT EA L + Q +EG + +++T++++
Sbjct: 453 VVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLP 512
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
L + + +HGYA+ +A D+ + +++V MYA+CG + +R VFD + +R++I+
Sbjct: 513 GCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVIT 572
Query: 280 WNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGY 337
WN ++ Y +G EA+ LFDEM + PN VT + ++AC++ G G + FHG
Sbjct: 573 WNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGM 632
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH-- 395
+ +K L V+D+ + G LD A ++ + P E+ VS+W+ L+ +H +
Sbjct: 633 ERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVE 692
Query: 396 -GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
G A E + LE G ++ +I SA AG+ D+ M + V E
Sbjct: 693 LGEVAAERLFE-LEPGEASHYVLLCNIYSA---AGMWDKSVAVRVRMRRQGVAKE 743
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 199/420 (47%), Gaps = 35/420 (8%)
Query: 109 NSYTFPFVLKACA---SNSLILEGKVVHGDIIRTGFLSDS---YVQAALVDMYAKCGQTD 162
+S+T VL AC+ + G+ H ++ GFL + + AL+ MYA+ G D
Sbjct: 168 SSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVD 227
Query: 163 DGCKVFDEMSVR------DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVS 216
D +F + D+V+W MI+ Q + EA+ + G+ D VT S
Sbjct: 228 DAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFAS 287
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFL-EDLCIQNSIVAMYARCGNVEKARLVFDMMEK- 274
A +L + + +H + +A L + + +++V MYA V AR VFDM+ +
Sbjct: 288 ALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEP 347
Query: 275 -RDLISWNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGR 332
R L WN+M+ GY Q G EAL LF M+ + C P+ T ++ AC
Sbjct: 348 SRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKE 407
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
HGY++ M + ++NA+MDMYA+ G++D A +F I P R+V SWN LI G +
Sbjct: 408 AMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDP--RDVVSWNTLITGCVV 465
Query: 393 HGHGRKALEFFSQM------------LEEG----VKPDHITFTSILSACSHAGLIDEGRK 436
GH +A + ++M EEG P++IT ++L C+ G++
Sbjct: 466 QGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKE 525
Query: 437 CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+ +++ ++ + +VDM + GCL + + ++P N W L++A +HG
Sbjct: 526 IHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPR-RNVITWNVLIMAYGMHG 584
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 27/280 (9%)
Query: 232 AVHGYAICNAFLE--DLCIQNSIVAMYARCGNVEKARLVFDMM--EKRDLISWNSMLTGY 287
++H A+ A L + N+++ YARCG+++ A +F E RD +S+NS+++
Sbjct: 84 SLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISAL 143
Query: 288 IQNGQASEAL-LLFDEMQNSDCKPNPVTALILVSACTYL---GSRQLGRKFHGYIINSNM 343
Q AL L D + + T + ++ AC++L R+LGR+ H + +
Sbjct: 144 CLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGF 203
Query: 344 KIDATLR---NAVMDMYAKCGDLDTAENMFND----IHPSERNVSSWNVLIAGYGMHGHG 396
+ R NA++ MYA+ G +D A+++F P +V +WN +I+ G
Sbjct: 204 LDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRC 263
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHY 453
+A+E M+ GV+PD +TF S L ACS ++ GR+ A + K L+ V
Sbjct: 264 AEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVA-- 321
Query: 454 ACMVDMLG---RAGCLYEAFDMIKQMPLPPND-SVWGALL 489
+ +VDM + FDM+ P P +W A++
Sbjct: 322 SALVDMYAGNEKVASARRVFDMV---PEPSRQLGMWNAMI 358
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/655 (35%), Positives = 376/655 (57%), Gaps = 42/655 (6%)
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACAS 122
+F+ I N ++ N ++R + + +T+ LY +R + + + ++FP +LKA +
Sbjct: 76 VFSQIPN--PHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSK 133
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
S G +HG + GF+ D ++Q L+ MYA C + D +FD+M D V+W ++
Sbjct: 134 VSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMI 193
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I Y Q ++AL LF+ + + DSV + +V SA G G++ + +H + N +
Sbjct: 194 IDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGY 253
Query: 243 LEDLCIQNSIVAMYARCGN-------------------------------VEKARLVFDM 271
D +Q +++ MYA CG V+ AR +FD
Sbjct: 254 AIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQ 313
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M +RDL+ W++M++GY ++ Q EAL LFDEM P+ +T L ++SAC+++G+
Sbjct: 314 MIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA 373
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
H Y+ S ++ NA++DMYAKCG+L A +F ++ +NV SW+ +I +
Sbjct: 374 NWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENM--PRKNVISWSSMINAFA 431
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEV 450
MHG+ A++ F +M E ++P+ +TF +L AC HAGL++EG K F+ M + + P
Sbjct: 432 MHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTR 491
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-----IAANYLFQ 505
+HY CMVD+ RA L +A ++I+ MP PN +WG+L+ AC++HGE AA L +
Sbjct: 492 EHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLE 551
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
LEP+H G V++SNIYA +W +VG +R+ M KG+ K A S IE + F ADR
Sbjct: 552 LEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADR 611
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+ E+Y+K++ + ++K+ GY P S L D+E+ED++ ++ +HSEKLAV +G+++
Sbjct: 612 YHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISR 671
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
E+ +++ KNLR+C DCHS + +S +Y+ +I+VRD RFHH GG CSC DYW
Sbjct: 672 RNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/659 (36%), Positives = 375/659 (56%), Gaps = 11/659 (1%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H+ + G + A +G +I Y+ G AR +F++I S W M+ Y
Sbjct: 167 VHACVYKLGFDSDAF-VGTALIDCYSVCGYAECARQVFDAIEYKDMVS--WTGMVACYVE 223
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
N E+L+L+S MR G N++TF VLKAC + GK VHG +T +L + +V
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
L+D+Y K G DD +VF+EM D++ W+ MI Y Q+E+ EEA+ +F + ++ +
Sbjct: 284 GVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLV 343
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
L + T+ S+ A L D+ +H + + ++ + N+++ MYA+CG +E +
Sbjct: 344 LPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQ 403
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
+F +SWN+++ GY+Q G +AL+LF +M + VT ++ AC + +
Sbjct: 404 LFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAA 463
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
+ G + H + + + + NA++DMYAKCG++ A +F+ + E + SWN +I
Sbjct: 464 LEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLR--EHDQVSWNAMI 521
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSV 446
+GY +HG +AL+ F MLE KPD +TF ILSACS+AGL+D G+ F M + +
Sbjct: 522 SGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDI 581
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAAN 501
+P +HY CMV +LGR+G L +A ++ ++P P+ VW ALL AC IH G I+A
Sbjct: 582 EPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQ 641
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
+ ++EPE VL+SNIYA + +W V +R MK KG++K S IE + F
Sbjct: 642 RVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFS 701
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
D +P K + +E + ++ + GY+PD S L DVED D+E L HSE+LA+A+G
Sbjct: 702 VGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYG 761
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ + +++ KNLR+C DCH+A + IS I +R II+RD NRFHHF G CSC DYW
Sbjct: 762 LIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 254/494 (51%), Gaps = 21/494 (4%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIK--YTTYGEPNTARSLFN 66
Y LL+SC A+ + +H + G L L A I+ Y Y A LF+
Sbjct: 47 YGSLLQSCIRNGDCATGKYLHCEIIKKG---NCLDLFANNILLNFYVKYDSLPDAAKLFD 103
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ + + SF+ T+I+ Y+ E + L+S ++ G N + F VLK S
Sbjct: 104 EMPDRNTVSFV--TLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWA 161
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
G VH + + GF SD++V AL+D Y+ CG + +VFD + +D+VSWT M+ Y
Sbjct: 162 KLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACY 221
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ E EE+L LF + + G ++ T SV A L +AVHG A ++LE+L
Sbjct: 222 VENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ ++ +Y + G+V+ A VF+ M K D+I W+ M+ Y Q+ Q+ EA+ +F M+
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRG 341
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
PN T L+ AC L QLG + H +++ + ++ + NA+MDMYAKCG ++ +
Sbjct: 342 LVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENS 401
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F++ P+ +V SWN +I GY G+G KAL F MLE V+ +T++S+L AC+
Sbjct: 402 LQLFSE-SPNCTDV-SWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACA 459
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDS 483
++ G + + K ++DM + G + +A FDM+++ +D
Sbjct: 460 GIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLRE-----HDQ 514
Query: 484 V-WGALLLACRIHG 496
V W A++ +HG
Sbjct: 515 VSWNAMISGYSVHG 528
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 195/413 (47%), Gaps = 15/413 (3%)
Query: 86 ANNGHCVETLELYSTMRRSGISS--NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS 143
+N C+ T + R S S N+Y + +L++C N GK +H +II+ G
Sbjct: 18 SNTALCIITQRSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCL 77
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D + L++ Y K D K+FDEM R+ VS+ +I Y Q + EA+ LF + Q
Sbjct: 78 DLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQ 137
Query: 204 QEG-----LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
EG + +V + V++ +LG +VH F D + +++ Y+
Sbjct: 138 GEGHELNPFVFSTVLKLLVSAEWAKLG-----FSVHACVYKLGFDSDAFVGTALIDCYSV 192
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG E AR VFD +E +D++SW M+ Y++N E+L LF M+ KPN T +
Sbjct: 193 CGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASV 252
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ AC L +G+ HG ++ + + ++D+Y K GD+D A +F ++ P +
Sbjct: 253 LKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEM-PKD- 310
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V W+ +IA Y +A+E F +M V P+ T S+L AC+ + G +
Sbjct: 311 DVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIH 370
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ K+ + V ++DM + G + + + + P D W +++
Sbjct: 371 CHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP-NCTDVSWNTVIVG 422
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/675 (35%), Positives = 384/675 (56%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C+ + LR Q+HS L +G+ + G+ + + Y G+ A +F+S D
Sbjct: 250 LLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDL-YVKSGDIEEALQIFDS--GD 306
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
++ LWN M+ AY ++ +++ M +G+ N +T+P +L+ C I G+
Sbjct: 307 RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ 366
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ GF SD YV L+DMY+K G D ++ D + +D+VSWT MI Y Q E
Sbjct: 367 IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEF 426
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+EAL F++ Q G+ D++ + S SA + V + +H + + D+ I N
Sbjct: 427 CKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNG 486
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V +YARCG ++A F+ +E ++ I+WN +++G+ Q+G EAL +F +M + K N
Sbjct: 487 LVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYN 546
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + +SA L + G++ H +I + + + NA++ +Y KCG ++ A+ F
Sbjct: 547 VFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFF 606
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ ++RN SWN +I HG G +AL+ F QM ++G+KP +TF +L+ACSH GL+
Sbjct: 607 EM--TKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLV 664
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F M+ + + P HYAC+VD+LGRAG L A +++MP+P + VW LL
Sbjct: 665 EEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLS 724
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC++H GE AA +L +LEP + +VL+SN YA + KW ++R+ MK++G++K
Sbjct: 725 ACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKE 784
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F DR++P ++Y + + + GY + H+ E E +
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGK 844
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ HSEKLAVAFG+M+L ++V KNLRVCNDCH+ +F S + R+I++RD R
Sbjct: 845 DPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYR 904
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G+CSC DYW
Sbjct: 905 FHHFNNGSCSCGDYW 919
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 246/503 (48%), Gaps = 10/503 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+IH+ GL + +G +I Y G AR +F + + S W ++ YA
Sbjct: 63 EIHAKAIICGLSGYRI-IGNLLIDLYAKKGFVRRARRVFEELSVRDNVS--WVAVLSGYA 119
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG E + LY M RSG+ Y +L AC L G+++H + + GF S+++
Sbjct: 120 QNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETF 179
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V AL+ +Y +C +VF +M D V++ +I+ + Q + AL +F + Q G
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG 239
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L DSVTI S+ +A +GD+ K + +H Y + D ++ S++ +Y + G++E+A
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
+FD ++ +++ WN ML Y Q +++ +F M + +PN T ++ CT+ G
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
LG + H I + + D + ++DMY+K G LD A+ + + I E++V SW +
Sbjct: 360 EIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE--EKDVVSWTSM 417
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
IAGY H ++ALE F +M G+ PD+I S +SAC+ + +G + A +
Sbjct: 418 IAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGY 477
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG--EIAANYLF 504
+V + +V + R G EAF + + + W L+ G E A
Sbjct: 478 SADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGIT-WNGLISGFAQSGLYEEALKVFM 536
Query: 505 QLEPEHTGY--FVLMSNIYAASN 525
+++ Y F +S+I A++N
Sbjct: 537 KMDQAGAKYNVFTFVSSISASAN 559
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/616 (38%), Positives = 357/616 (57%), Gaps = 36/616 (5%)
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
DK LW M+ Y+ NG + +E + MR GI N +TFP +L AC S S G
Sbjct: 201 DKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGA 260
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
VHG I+R+GF ++ +V +ALVDMY+KCG + ++ + M V D VSW MI +
Sbjct: 261 QVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQG 320
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EEAL LF+ + D T SV + + D+ A +VH + F + N
Sbjct: 321 LGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNN 380
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MYA+ G + A VF+ M +D+ISW S++TG + NG EAL LF EM+ P
Sbjct: 381 ALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHP 440
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ + ++SAC L + G++ H + S + ++ N+++ MYAKCG ++ A +F
Sbjct: 441 DQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVF 500
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ + ++V +W LI GY +G GR HAGL
Sbjct: 501 DSMEI--QDVITWTALIVGYAQNGRGR----------------------------DHAGL 530
Query: 431 IDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++ GR F M ++ +KP +HYACM+D+LGR+G L EA +++ QM + P+ +VW ALL
Sbjct: 531 VEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALL 590
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+HG + AAN LF+LEP++ +VL+SN+Y+A+ KW E K R MK +G+ K
Sbjct: 591 AACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSK 650
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE + F + DR +P E+Y KV+ + + IK AGY+PD++ ALHD+++E
Sbjct: 651 EPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEG 710
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L YHSEKLAVAFG++ + P A +++ KNLR+C DCH+A +++S ++ R +I+RD+N
Sbjct: 711 KELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSN 770
Query: 665 RFHHFEGGTCSCNDYW 680
FHHF G CSC+DYW
Sbjct: 771 CFHHFREGACSCSDYW 786
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 174/352 (49%), Gaps = 14/352 (3%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
++ YA G+ ++ K+F E +R ++W+ +I+ Y + EAL LF + Q EG +
Sbjct: 78 MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPN 137
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
T SV + K + +H +AI F + + +V MYA+C + +A +F+
Sbjct: 138 QFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFE 197
Query: 271 MM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+ +KR+ + W +M+TGY QNG +A+ F +M+ + N T +++AC + +
Sbjct: 198 LAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG 257
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G + HG I+ S + + +A++DMY+KCGDL A M + + SWN +I G
Sbjct: 258 FGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDP--VSWNSMIVG 315
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
G G +AL F M +K D T+ S+L+ S + + R + + L VK
Sbjct: 316 CVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFS---FVMDMRNAMS-VHSLIVKTG 371
Query: 450 VKHYA----CMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ Y +VDM + G AFD+ ++M D + W +L+ C +G
Sbjct: 372 FEAYKLVNNALVDMYAKRGYFDYAFDVFEKM--TDKDVISWTSLVTGCVHNG 421
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 11/289 (3%)
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
SDS ++S S G++ D K V D C N+++ YA G + +AR +
Sbjct: 42 SDSNWVLSNLSKCGRVDDARKLFDVMPD-------RDECSWNTMIGAYANSGRLNEARKL 94
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F R I+W+S+++GY + G EAL LF EMQ +PN T ++ C+
Sbjct: 95 FYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLL 154
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ G++ H + I + +A + ++DMYAKC + AE +F ++ P +RN W ++
Sbjct: 155 EKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLF-ELAPDKRNHVLWTAMVT 213
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
GY +G G KA+E F M EG++ + TF SIL+AC G + + +
Sbjct: 214 GYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGA 273
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
V + +VDM + G L A M++ M + +D V W ++++ C G
Sbjct: 274 NVFVGSALVDMYSKCGDLSNARRMLETMEV--DDPVSWNSMIVGCVRQG 320
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/686 (36%), Positives = 393/686 (57%), Gaps = 13/686 (1%)
Query: 2 RRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTA 61
+RL P + + +L+ L L+QIH+ + TSGL + L ++ Y G A
Sbjct: 18 QRLCPLAQS-HASILRKLKDLKPLQQIHAQIITSGLTHNTF-LSNSLMNAYVYCGLLADA 75
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
+ +F+ H W +I A N VE ++++ M N+ T VL A A
Sbjct: 76 KQIFH--HTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFA 133
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
+ LI K VH +R GF + +V+ ALVDMY+K G ++F+ MS R++VSW
Sbjct: 134 NLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNA 193
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+++ Y EEA+ LF +++GLL D TI+S+ A +G + +HG+ I
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG 253
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
+ D I+ +++ +Y V+ A VF M +D+ +W MLTG+ A+ F+
Sbjct: 254 YENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFN 313
Query: 302 EMQN-SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M + K + + + ++S+C++ G+ Q GR+ H I + + + +AV+DMYA C
Sbjct: 314 KMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANC 373
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G+L+ A+ F + E++V WN +IAG GM+G+G A++ F QM G+ PD TF S
Sbjct: 374 GNLEDAKRFFYGM--GEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVK-PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+L ACSHAG++ EG + F M K S P ++HYAC++D+LGRAG L A+ I MP
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491
Query: 480 PNDSVWGALLLACRIHGEIAANY-----LFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P+ V+ LL ACRIHG I + +F++EP GY+VL+SN+YA + W V R
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
+++K LKK FS IE ++I F ++ +P + ++ ++ + ++IK AGY+P+ +
Sbjct: 552 ASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
L DV D+ ++ +L +HSEK+A+AFG+M P ++++TKNLR CNDCHSA +F+S ++
Sbjct: 612 VLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVF 671
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R ++++DANRFH F+ G CSC DYW
Sbjct: 672 GRVLVIKDANRFHVFQDGVCSCRDYW 697
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/749 (34%), Positives = 412/749 (55%), Gaps = 73/749 (9%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G + F +LK+C L S R H + +G + A ++ Y+ G
Sbjct: 108 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNA-LVAMYSRCG 166
Query: 57 EPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTM------RRSGISSN 109
A +F+ I + WN+++ A+ + + L+L+S M + + S+
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD 169
+ +L AC S + + K VHG+ IR G D +V AL+D YAKCG ++ KVF+
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE------------------------ 205
M +D+VSW M+ Y Q+ + A LF+ ++E
Sbjct: 287 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 346
Query: 206 -----------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL----------E 244
G L + VTI+SV SA LG + +H Y++ N L E
Sbjct: 347 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 406
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFD--MMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
DL + N+++ MY++C + + AR +FD +E+R++++W M+ G+ Q G +++AL LF E
Sbjct: 407 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 466
Query: 303 M--QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT---LRNAVMDMY 357
M + PN T ++ AC +L + ++G++ H Y++ + + D++ + N +++MY
Sbjct: 467 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH-QYDSSAYFVANCLINMY 525
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHIT 417
+KCGD+DTA ++F+ + S+++ SW ++ GYGMHG G +AL+ F +M + G PD IT
Sbjct: 526 SKCGDVDTARHVFDSM--SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDIT 583
Query: 418 FTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
F +L ACSH G++D+G F M+ + P +HYA +D+L R G L +A+ +K M
Sbjct: 584 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDM 643
Query: 477 PLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
P+ P VW ALL ACR+H + A N L ++ E+ G + L+SNIYA + +W++V
Sbjct: 644 PMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVA 703
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
++R MK G+KK S ++ K F DR +P ++Y +ES+ IK GY+P
Sbjct: 704 RIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVP 763
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
+ + ALHDV++E++ ++L HSEKLA+A+G++ P +++TKNLRVC DCHSAF +IS
Sbjct: 764 ETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYIS 823
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I +I+VRD +RFHHF+ G+CSC YW
Sbjct: 824 KIVDHEIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 245/512 (47%), Gaps = 61/512 (11%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
LG ++ Y G + A + + S + WN +IR + G + + M R
Sbjct: 53 LGTGVVASYLACGATDYALLVLERV--TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 110
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+G + +T P VLKAC G HG I GF S+ ++ ALV MY++CG ++
Sbjct: 111 AGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 170
Query: 164 GCKVFDEMSVR---DLVSWTVMITAYEQAEKPEEALILFQKT------QQEGLLSDSVTI 214
+FDE++ R D++SW +++A+ ++ AL LF K + SD ++I
Sbjct: 171 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 230
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
V++ A G L V + + VHG AI N D+ + N+++ YA+CG +E A VF+MME
Sbjct: 231 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF 290
Query: 275 RDLISWNSMLTGYIQNGQ-----------------------------------ASEALLL 299
+D++SWN+M+ GY Q+G + EAL +
Sbjct: 291 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 350
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI----------DATL 349
F +M S PN VT + ++SAC LG+ G + H Y + + + D +
Sbjct: 351 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMV 410
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
NA++DMY+KC A ++F+DI ERNV +W V+I G+ +G AL+ F +M+ E
Sbjct: 411 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 470
Query: 410 --GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA--CMVDMLGRAGC 465
GV P+ T + IL AC+H I G++ A + + ++ C+++M + G
Sbjct: 471 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGD 530
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ A + M S W +++ +HG
Sbjct: 531 VDTARHVFDSMSQKSAIS-WTSMMTGYGMHGR 561
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 166/310 (53%), Gaps = 11/310 (3%)
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F+S + +V Y CG TD V + ++ V W ++I + + + + A+ +
Sbjct: 47 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ + G D T+ V A G+L A HG CN F ++ I N++VAMY+RCG
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166
Query: 261 NVEKARLVFDMMEKR---DLISWNSMLTGYIQNGQASEALLLFDEM------QNSDCKPN 311
++E+A ++FD + +R D+ISWNS+++ ++++ A AL LF +M + ++ + +
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
++ + ++ AC L + ++ HG I + +D + NA++D YAKCG ++ A +FN
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ++V SWN ++AGY G+ + A E F M +E + D +T+T++++ S G
Sbjct: 287 MME--FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCS 344
Query: 432 DEGRKCFADM 441
E F M
Sbjct: 345 HEALNVFRQM 354
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/659 (35%), Positives = 375/659 (56%), Gaps = 11/659 (1%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H+ G + L + + ++ Y + AR +F+ + + + LWNTMI
Sbjct: 125 LHAHAVVDGF-DSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDT--VLWNTMITGLVR 181
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
N ++++++ M G+ +S T VL A A + G + ++ GF D YV
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
L+ +++KC D +F + DLVS+ +I+ + + E A+ F++ G
Sbjct: 242 LTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQ 301
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
S T+V + G + A + G+ + + + + ++ +Y+R ++ AR
Sbjct: 302 RVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQ 361
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
+FD ++ + +WN+M++GY Q+G A+ LF EM ++ PNPVT ++SAC LG+
Sbjct: 362 LFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGA 421
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
G+ H I + N++ + + A++DMYAKCG++ A +F+ SE+N +WN +I
Sbjct: 422 LSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFD--LTSEKNTVTWNTMI 479
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSV 446
GYG+HG+G +AL+ F++ML G +P +TF S+L ACSHAGL+ EG + F M K +
Sbjct: 480 FGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRI 539
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAAN 501
+P +HYACMVD+LGRAG L +A + I++MP+ P +VWG LL AC IH +A+
Sbjct: 540 EPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASE 599
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
LF+L+P + GY+VL+SNIY+ + + +RE +K + L K ++IE F
Sbjct: 600 RLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFV 659
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
DR + +Y K+E + +++ GY + ALHDVE+E++E M N HSEKLA+AFG
Sbjct: 660 CGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFG 719
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ P +++ KNLRVC DCH+A +FIS I R I+VRDANRFHHF+ G CSC DYW
Sbjct: 720 LITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/542 (26%), Positives = 270/542 (49%), Gaps = 26/542 (4%)
Query: 17 KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
K+C F L + H+ L +G L K+ K G AR+LF S+ K F
Sbjct: 17 KACTF-PHLAETHAQLIRNGY-QHDLATVTKLTQKLFDVGATRHARALFFSV--PKPDIF 72
Query: 77 LWNTMIRAYANNGHCVETLELYS-TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
L+N +I+ ++ + ++ Y+ ++ + +S +++T+ F + A ++L G +H
Sbjct: 73 LFNVLIKGFSFSPD-ASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAH 128
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+ GF S+ +V +ALVD+Y K + KVFD+M RD V W MIT + +++
Sbjct: 129 AVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDS 188
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+ +F+ +G+ DS T+ +V AV ++ +V + A+ F D + ++++
Sbjct: 189 VQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISV 248
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
+++C +V+ ARL+F M+ K DL+S+N++++G+ NG+ A+ F E+ S + + T
Sbjct: 249 FSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTM 308
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ L+ + G L G+ + S + ++ A+ +Y++ ++D A +F++
Sbjct: 309 VGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDE--S 366
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
SE+ V++WN +I+GY G A+ F +M+ P+ +T TSILSAC+ G + G+
Sbjct: 367 SEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGK 426
Query: 436 KCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLAC 492
+ +++ + ++DM + G + EA FD+ + N W ++
Sbjct: 427 SVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSE----KNTVTWNTMIFGY 482
Query: 493 RIHG-EIAANYLFQLEPEHTGY----FVLMSNIYAASNKW--REVGKLREDMKNKGLKKP 545
+HG A LF E H G+ +S +YA S+ RE ++ M NK +P
Sbjct: 483 GLHGYGDEALKLFN-EMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEP 541
Query: 546 AA 547
A
Sbjct: 542 LA 543
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/736 (34%), Positives = 395/736 (53%), Gaps = 80/736 (10%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR-SLFNSIHNDKSYSFLWNT 80
L+ RQ H+ + L + L ++ Y +T + SL S H F +++
Sbjct: 16 LSQARQAHALILRLNLFSDT-QLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSS 74
Query: 81 MIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
+I A+A + H L +S + + +++ P +K+CAS + G+ +H +G
Sbjct: 75 LIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASG 134
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
FL+DS V ++L MY KC + D K+FD M RD+V W+ MI Y + EEA LF
Sbjct: 135 FLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFG 194
Query: 201 KTQQ-----------------------------------EGLLSDSVTIVSVASAVGQLG 225
+ + +G D T+ V AVG L
Sbjct: 195 EMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLE 254
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
DV+ VHGY I D + ++++ MY +CG V++ VFD +E+ ++ S N+ LT
Sbjct: 255 DVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLT 314
Query: 286 GY-----------------------------------IQNGQASEALLLFDEMQNSDCKP 310
G QNG+ EAL LF +MQ +P
Sbjct: 315 GLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEP 374
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N VT L+ AC + + G++ H + + + D + +A++DMYAKCG + A F
Sbjct: 375 NAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCF 434
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ + S N+ SWN ++ GY MHG ++ +E F ML+ G KPD +TFT +LSAC+ GL
Sbjct: 435 DKM--SALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGL 492
Query: 431 IDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+EG +C+ M++ ++P+++HYAC+V +L R G L EA+ +IK+MP P+ VWGALL
Sbjct: 493 TEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALL 552
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
+CR+H GEIAA LF LEP + G ++L+SNIYA+ W E ++RE MK+KGL+K
Sbjct: 553 SSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRK 612
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
+S IE G + D+ +P K++ +K++ + +++K +GY+P + L DVE++D
Sbjct: 613 NPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQD 672
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E +L HSEKLAV G++N +P +QV KNLR+C+DCH+ + IS + R+I VRD N
Sbjct: 673 KEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTN 732
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF+ G CSC D+W
Sbjct: 733 RFHHFKDGVCSCGDFW 748
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/667 (36%), Positives = 381/667 (57%), Gaps = 42/667 (6%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNS 110
Y+ G + +F+S+ N S WN+++ YA NG E++ +Y+ M + G ++ N
Sbjct: 81 YSKLGYLQDMQRVFDSMPNHDVVS--WNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNR 138
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
TF +L ++ + G+ +HG I + G+ S +V + LVDMYAK G +D ++F+E
Sbjct: 139 ITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEE 198
Query: 171 -------------------------------MSVRDLVSWTVMITAYEQAEKPEEALILF 199
M +D +SWT +IT Q +EA+ F
Sbjct: 199 IPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKF 258
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
++ EG D T SV +A G + + + +H Y I + +++ + ++++ MY +C
Sbjct: 259 KEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKC 318
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
NV+ A VF M +++ISW +ML GY QNG + EA+ +F +MQ ++ P+ T ++
Sbjct: 319 RNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVI 378
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
S+C L S + G +FHG + S + T+ NA++ +Y KCG L+ A +F+++ R+
Sbjct: 379 SSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKI--RD 436
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
SW L++GY G + + F ML G+ PD +TF +LSACS AGL+++G F
Sbjct: 437 EVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFE 496
Query: 440 DMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI 498
M K + P HY CM+D+L RAG L EA + I QMP P+ W LL +CR++G +
Sbjct: 497 CMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNL 556
Query: 499 -----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
AA L +LEP++ ++L+S+IYAA KW +V KLR+ M+ G+KK S I+Y
Sbjct: 557 EIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKY 616
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F DR +P+ ++Y K+ES+ +++ GY+PD+S LHDVE ++ MLN+HS
Sbjct: 617 KNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHS 676
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLA+AFG++ + ++V KNLRVC DCH+A ++IS I +R+I+VRDA RFH F+ G
Sbjct: 677 EKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGV 736
Query: 674 CSCNDYW 680
CSC D+W
Sbjct: 737 CSCGDFW 743
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 193/447 (43%), Gaps = 66/447 (14%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
+SS+S + LK C + K +H IIRT ++++ L++ Y K G +
Sbjct: 1 MSSSSNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNAR 60
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE---------------GLLSD 210
VFD + +L SW +++AY + ++ +F GL+S+
Sbjct: 61 NVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISE 120
Query: 211 SVTIVSVASAVGQL-----------------GDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
SV + ++ G + G V + +HG + L + + +V
Sbjct: 121 SVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLV 180
Query: 254 AMYA-------------------------------RCGNVEKARLVFDMMEKRDLISWNS 282
MYA RC + +A +FD M ++D ISW +
Sbjct: 181 DMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTT 240
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
++TG QNG EA+ F EM + T +++AC + G++ H YII ++
Sbjct: 241 IITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTD 300
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ + + +A++DMY KC ++ AE +F + +NV SW ++ GYG +G+ +A+
Sbjct: 301 YQDNIFVGSALLDMYCKCRNVKYAEAVFRKMR--HKNVISWTAMLVGYGQNGYSEEAVRI 358
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
F M + PD T S++S+C++ ++EG + + V ++ + G+
Sbjct: 359 FCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGK 418
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALL 489
G L A + +M + ++ W AL+
Sbjct: 419 CGSLEHAHQLFHEMKI-RDEVSWTALV 444
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 143/300 (47%), Gaps = 35/300 (11%)
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
G+LGD+ A+ V + +L N++++ Y++ G ++ + VFD M D++SWN
Sbjct: 51 GKLGDLKNARNVFDHIP----QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWN 106
Query: 282 SMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
S+L+GY NG SE++ +++ M ++ N +T ++ + G LGR+ HG I
Sbjct: 107 SLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFK 166
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI--------------------------- 373
+ + + ++DMYAK G ++ A +F +I
Sbjct: 167 FGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQL 226
Query: 374 --HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ E++ SW +I G +G ++A++ F +M EG D TF S+L+AC +
Sbjct: 227 FDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLAL 286
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
DEG++ A + + + + + ++DM + + A + ++M N W A+L+
Sbjct: 287 DEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMR-HKNVISWTAMLVG 345
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/693 (35%), Positives = 394/693 (56%), Gaps = 18/693 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
+RR G T+G +LK C L +Q+H G + + + +G ++ Y
Sbjct: 83 LRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFV-EDVSVGTSLVDMYMKTE 141
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+F+ + S W +++ Y NG + L+L+S M+ GI N +TF V
Sbjct: 142 SVEDGERVFDEMRVKNVVS--WTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAV 199
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L A++ + +G VH +I++G S +V ++V+MY+K D VFD M R+
Sbjct: 200 LGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNA 259
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW MI + EA LF + + EG+ +V + ++ A+ +H
Sbjct: 260 VSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQ 319
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK-RDLISWNSMLTGYIQNGQASE 295
I N DL I+ +++ Y++C ++ A +F MM ++++SW ++++GY+QNG+
Sbjct: 320 VIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDR 379
Query: 296 ALLLFDEMQNSD-CKPNPVTALILVSACTY-LGSRQLGRKFHGYIINSNMKIDATLRNAV 353
A+ LF +M+ + +PN T +++AC S + G++FH I S + +A+
Sbjct: 380 AMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSAL 439
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+ MYAK G++++A +F +R++ SWN +I+GY HG G+K+L+ F +M + ++
Sbjct: 440 VTMYAKRGNIESANEVFK--RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLEL 497
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
D ITF ++SAC+HAGL++EG++ F M K + P ++HY+CMVD+ RAG L +A D+
Sbjct: 498 DGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDL 557
Query: 473 IKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKW 527
I +MP P ++W LL ACR+H GE+AA L L+P+ + +VL+SNIYA + W
Sbjct: 558 INKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNW 617
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+E K+R+ M K +KK A +S IE F D +P +Y K+E +++ +K A
Sbjct: 618 QERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDA 677
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
GY PD LHDVE+E +E +L+ HSE+LA+AFG++ P +Q+ KNLRVC DCH+
Sbjct: 678 GYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVI 737
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ IS I R I+VRD+NRFHHF+GG+CSC DYW
Sbjct: 738 KLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 216/420 (51%), Gaps = 4/420 (0%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N ++ ++ N E L L+ +RRSG ++ + VLK C + GK VH I+
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF+ D V +LVDMY K +DG +VFDEM V+++VSWT ++ Y Q E+AL L
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F + Q EG+ + T +V + G V K VH I + + + NS+V MY++
Sbjct: 181 FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK 240
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
V A+ VFD ME R+ +SWNSM+ G++ NG EA LF M+ K +
Sbjct: 241 SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ C + ++ H +I + D ++ A+M Y+KC ++D A +F +H +
Sbjct: 301 IKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQ- 359
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQM-LEEGVKPDHITFTSILSACSH-AGLIDEGRK 436
NV SW +I+GY +G +A+ F QM EEGV+P+ TF+S+L+AC+ +++G++
Sbjct: 360 NVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQ 419
Query: 437 CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+ K + + +V M + G + A ++ K+ + + W +++ HG
Sbjct: 420 FHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMISGYAQHG 478
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 2/262 (0%)
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
++FDE + L ++ + + ++ +EAL LF ++ G +D ++ V G L
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
D + + VH I F+ED+ + S+V MY + +VE VFD M ++++SW S+L
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY QNG +AL LF +MQ KPNP T ++ G+ + G + H +I S +
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ N++++MY+K + A+ +F+ + RN SWN +IAG+ +G +A E F +
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSME--NRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 406 MLEEGVKPDHITFTSILSACSH 427
M EGVK F +++ C++
Sbjct: 285 MRLEGVKLTQTIFATVIKLCAN 306
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 131/289 (45%), Gaps = 10/289 (3%)
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
+FD ++ L N +L + +N Q EAL LF ++ S + + ++ C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
R +G++ H I D ++ +++DMY K ++ E +F+++ +NV SW L+
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRV--KNVVSWTSLL 165
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
AGY +G +AL+ FSQM EG+KP+ TF ++L + G +++G + + K +
Sbjct: 166 AGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLD 225
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLE 507
+ MV+M ++ + +A + M N W +++ +G LE
Sbjct: 226 STIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAGFVTNG-------LDLE 277
Query: 508 PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
Y + + + + V KL ++K K VI+ G D
Sbjct: 278 AFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSD 326
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/749 (34%), Positives = 412/749 (55%), Gaps = 73/749 (9%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G + F +LK+C L S R H + +G + A ++ Y+ G
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNA-LVAMYSRCG 59
Query: 57 EPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTM------RRSGISSN 109
A +F+ I + WN+++ A+ + + L+L+S M + + S+
Sbjct: 60 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 119
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD 169
+ +L AC S + + K VHG+ IR G D +V AL+D YAKCG ++ KVF+
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE------------------------ 205
M +D+VSW M+ Y Q+ + A LF+ ++E
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239
Query: 206 -----------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL----------E 244
G L + VTI+SV SA LG + +H Y++ N L E
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFD--MMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
DL + N+++ MY++C + + AR +FD +E+R++++W M+ G+ Q G +++AL LF E
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359
Query: 303 M--QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT---LRNAVMDMY 357
M + PN T ++ AC +L + ++G++ H Y++ + + D++ + N +++MY
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH-QYDSSAYFVANCLINMY 418
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHIT 417
+KCGD+DTA ++F+ + S+++ SW ++ GYGMHG G +AL+ F +M + G PD IT
Sbjct: 419 SKCGDVDTARHVFDSM--SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDIT 476
Query: 418 FTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
F +L ACSH G++D+G F M+ + P +HYA +D+L R G L +A+ +K M
Sbjct: 477 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDM 536
Query: 477 PLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
P+ P VW ALL ACR+H + A N L ++ E+ G + L+SNIYA + +W++V
Sbjct: 537 PMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVA 596
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
++R MK G+KK S ++ K F DR +P ++Y +ES+ IK GY+P
Sbjct: 597 RIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVP 656
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
+ + ALHDV++E++ ++L HSEKLA+A+G++ P +++TKNLRVC DCHSAF +IS
Sbjct: 657 ETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYIS 716
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I +I+VRD +RFHHF+ G+CSC YW
Sbjct: 717 KIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/697 (35%), Positives = 399/697 (57%), Gaps = 47/697 (6%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M ++G + F + L+ C L S +Q+HS L G +G +I Y
Sbjct: 166 MLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTF-VGNALIDMYAKCD 224
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS--GISSNSYTFP 114
+ + +F+ + + WN++I A A GH + L L+ M+ S GI + +TF
Sbjct: 225 DEESCLKVFDEMGERNQVT--WNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFT 282
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
+L CA+ +G+ +H +IR + V+ LV MY++CG+ + ++F+ M+ R
Sbjct: 283 TLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER 342
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+ SW MI Y+Q + +EAL LF++ Q G+ D ++ S+ S+ L D K + +H
Sbjct: 343 NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELH 402
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS--WNSMLTGYIQNGQ 292
+ + N E+ +Q +V MYA+CG+++ A V+D K+D + WNS+L GY G
Sbjct: 403 NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGL 462
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
E+ F EM SD + + +T + +V+ L A
Sbjct: 463 KKESFNHFLEMLESDIEYDVLTMVTIVNLLV-------------------------LETA 497
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++DMY+KCG + A +F++++ +N+ SWN +I+GY HG ++AL + +M ++G+
Sbjct: 498 LVDMYSKCGAITKARTVFDNMNG--KNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMY 555
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFD 471
P+ +TF +ILSACSH GL++EG + F M + +++ + +HY CMVD+LGRAG L +A +
Sbjct: 556 PNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKE 615
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
+++MP+ P S WGALL ACR+H G +AA LF+L+P++ G +V+MSNIYAA+ +
Sbjct: 616 FVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGR 675
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W+EV +R+ MK KG+KK S IE +IQ FH + +P +E+Y + + ++ K
Sbjct: 676 WKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKG 735
Query: 587 AGYMPDLSCALHDVEDEDREHMLNY---HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
GY+PD S L +V+D E Y HSE+LA++ G+++L ++ ++V KNLR+C DC
Sbjct: 736 LGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDC 795
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
H+A +FIS I R+II RD NRFHHFE G CSC DYW
Sbjct: 796 HTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 160/557 (28%), Positives = 279/557 (50%), Gaps = 41/557 (7%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYG---EPNTARSLF 65
Y L++ C N + IH+ + ++G N +L KI++ Y G + AR LF
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGY-NPDAYLMTKILMLYARSGCLDDLCYARKLF 132
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ + WNTMI AYA +E ++ M + G+ +++TF L+ C +
Sbjct: 133 EEMPERNLTA--WNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRS 190
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
GK VH +I GF D++V AL+DMYAKC + KVFDEM R+ V+W +I+A
Sbjct: 191 RDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISA 250
Query: 186 YEQAEKPEEALILFQKTQQ--EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
Q +AL+LF + Q+ +G+ D T ++ + + + + +H + I
Sbjct: 251 EAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 310
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+++ ++ +V MY+ CG + A+ +F+ M +R+ SWNSM+ GY QNG+ EAL LF +M
Sbjct: 311 KNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQM 370
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
Q + KP+ + ++S+C L Q GR+ H +I+ + M+ + L+ ++DMYAKCG +
Sbjct: 371 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSM 430
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
D A +++ +RN + WN ++AGY G +++ F +MLE ++ D +T +I++
Sbjct: 431 DYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 490
Query: 424 AC----------SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
S G I + R F +M + + M+ + GC EA +
Sbjct: 491 LLVLETALVDMYSKCGAITKARTVFDNMN----GKNIVSWNAMISGYSKHGCSKEALILY 546
Query: 474 KQMP---LPPNDSVWGALLLAC----------RIHGEIAANYLFQLEPEHTGYFVLMSNI 520
++MP + PN+ + A+L AC RI + +Y + + EH + M ++
Sbjct: 547 EEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEH---YTCMVDL 603
Query: 521 YAASNKWREVGKLREDM 537
+ + + + E M
Sbjct: 604 LGRAGRLEDAKEFVEKM 620
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 224/438 (51%), Gaps = 19/438 (4%)
Query: 69 HNDKSYSFLWNTMIRAY-ANNGHCVETLEL----------YSTMRRSGISSNSYTFPFVL 117
H + + L N +++ A+ GH T++L S + N + ++
Sbjct: 19 HYSRHFFLLPNPNSKSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPASDVNPLPYSSLI 78
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC---KVFDEMSVR 174
+ C ++ GK +H +I G+ D+Y+ ++ +YA+ G DD C K+F+EM R
Sbjct: 79 QDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPER 138
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+L +W MI AY + + EA +F + + G+ D+ T S G L + VH
Sbjct: 139 NLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVH 198
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
I F D + N+++ MYA+C + E VFD M +R+ ++WNS+++ Q G +
Sbjct: 199 SKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFN 258
Query: 295 EALLLFDEMQNSD--CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
+AL+LF MQ S+ +P+ T L++ C + GR+ H ++I +N+ + +
Sbjct: 259 DALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETE 318
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++ MY++CG L+ A+ +FN + +ERN SWN +I GY +G ++AL F QM G+K
Sbjct: 319 LVHMYSECGRLNYAKEIFNRM--AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK 376
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
PD + +S+LS+C +GR+ + + +++ E +VDM + G + A+ +
Sbjct: 377 PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKV 436
Query: 473 IKQ-MPLPPNDSVWGALL 489
Q + N ++W ++L
Sbjct: 437 YDQTIKKDRNTALWNSIL 454
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/669 (37%), Positives = 384/669 (57%), Gaps = 19/669 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
LA +Q+H GL + L + +I Y + AR++FN++ S WN++
Sbjct: 338 LALGQQVHCMALKLGL-DLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLIS--WNSV 394
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG----KVVHGDII 137
I A + VE + L+ + R G+ + YT VLKA +S + EG K +H I
Sbjct: 395 IAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASS---LPEGLSLSKQIHVHAI 451
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+T ++DS+V AL+D Y++ + +F + DLV+W M++ Y Q+ + L
Sbjct: 452 KTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLE 510
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF ++G SD T+ +V G L + + + VH YAI + + DL + + I+ MY
Sbjct: 511 LFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 570
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG++ A+ FD + D ++W ++++G I+NG+ AL +F +M+ P+ T
Sbjct: 571 KCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIAT 630
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L A + L + + GR+ H + N D + +++DMYAKCG +D A +F I
Sbjct: 631 LAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIE--M 688
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
N+++WN ++ G HG G++AL+ F QM G+KPD +TF +LSACSH+GL+ E K
Sbjct: 689 MNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKY 748
Query: 438 FADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
M + +KPE++HY+C+ D LGRAG + EA ++I M + + S++ LL ACR+ G
Sbjct: 749 IRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQG 808
Query: 497 EI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
+ A L +LEP + +VL+SN+YAA++KW E+ R MK +KK FS I
Sbjct: 809 DTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 868
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E I F DR NP + +YKKV+ M +IK GY+P+ L DVE+E++E L Y
Sbjct: 869 EVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYY 928
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSEKLAVAFG+++ P ++V KNLRVC DCH+A ++IS +Y R+I++RDANRFH F+
Sbjct: 929 HSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKD 988
Query: 672 GTCSCNDYW 680
G CSC DYW
Sbjct: 989 GICSCGDYW 997
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 209/420 (49%), Gaps = 5/420 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N ++ Y + G L+ + M S + + TF VL + G+ VH ++
Sbjct: 291 NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALK 350
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G V +L++MY K + VF+ MS RDL+SW +I Q++ EA+ L
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYA 257
F + + GL D T+ SV A L + L ++ +H +AI + D + +++ Y+
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYS 470
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
R +++A ++F DL++WN+M++GY Q+ + L LF M + + T
Sbjct: 471 RNRCMKEAEVLFG-RNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLAT 529
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ C +L + G++ H Y I S +D + + ++DMY KCGD+ A+ F+ I P
Sbjct: 530 VLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI-PVP 588
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
+V +W LI+G +G +AL FSQM GV PD T ++ A S +++GR+
Sbjct: 589 DDV-AWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 647
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
A+ KL+ + +VDM + G + +A+ + K++ + N + W A+L+ HGE
Sbjct: 648 HANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE 706
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 41/384 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCV-----ETLELYSTMR 102
+I Y+ G AR +F+ + S WN+++ AYA + V E L+ +R
Sbjct: 87 LISMYSKCGSLTYARRVFDKMPERDLVS--WNSILAAYAQSSEGVVENVKEAFLLFRILR 144
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+ + ++ T +LK C + + + HG + G D +V ALV++Y K G+
Sbjct: 145 QDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVK 204
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+G +F+EM RD+V W +M+ AY + EEA+ L GL + +T+ ++ G
Sbjct: 205 EGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISG 264
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
+ + ++ GN D ++IS N
Sbjct: 265 DDSEAGQVKSFEN------------------------GN--------DASAVSEIISRNK 292
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
+L+GY+ GQ S L F +M SD + + VT +++++ L S LG++ H +
Sbjct: 293 ILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLG 352
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ + T+ N++++MY K + A +FN++ SER++ SWN +IAG +A+
Sbjct: 353 LDLMLTVSNSLINMYCKLRKIGLARTVFNNM--SERDLISWNSVIAGIAQSDLEVEAVCL 410
Query: 403 FSQMLEEGVKPDHITFTSILSACS 426
F Q+L G+KPDH T TS+L A S
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAAS 434
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 191/427 (44%), Gaps = 55/427 (12%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
F F+ A +++ L+L GK H I+ + ++ L+ MY+KCG +VFD+M
Sbjct: 50 FGFLRDAISTSDLML-GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMP 108
Query: 173 VRDLVSWTVMITAYEQA-----EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
RDLVSW ++ AY Q+ E +EA +LF+ +Q+ + + +T+ + G V
Sbjct: 109 ERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 168
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+++ HGYA D + ++V +Y + G V++ R++F+ M RD++ WN ML Y
Sbjct: 169 CASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAY 228
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
++ G EA+ L S PN +T +L SR G
Sbjct: 229 LEMGFKEEAIDLSSAFHTSGLHPNEITLRLL--------SRISGDD-------------- 266
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
++ G + + EN + SE + S N +++GY G L+ F M+
Sbjct: 267 ----------SEAGQVKSFENGNDASAVSE--IISRNKILSGYLHAGQYSALLKCFMDMV 314
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM---LGRAG 464
E ++ D +TF +L+ + G++ KL + + +++M L + G
Sbjct: 315 ESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIG 374
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQ------LEPEHTGYFVLMS 518
F+ + + L +SV + + E+ A LF L+P+H + + S
Sbjct: 375 LARTVFNNMSERDLISWNSVIAGI---AQSDLEVEAVCLFMQLLRCGLKPDH---YTMTS 428
Query: 519 NIYAASN 525
+ AAS+
Sbjct: 429 VLKAASS 435
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/672 (37%), Positives = 386/672 (57%), Gaps = 49/672 (7%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKI---IIKYTTYGEPNTARSLFNSIHNDKSYSF 76
L SLR IH+ + +GL N L I I+ G P A S+F +I
Sbjct: 1 QILQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLP-YAISVFETIQEPNL--L 57
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
+WNTM R +A + V L+LY M G+ NSYTFPF+LK+CA + EG+ +HG +
Sbjct: 58 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHV 117
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE-------------------------- 170
++ G D YV +L+ MY + G+ +D KVFDE
Sbjct: 118 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQ 177
Query: 171 -----MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+ V+D+VSW MI+ Y + +EAL LF+ + + D T+V+V SA Q G
Sbjct: 178 KMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 237
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + VH + + F +L I N+++ +Y++CG +E A +F+ + +D+ISWN+++
Sbjct: 238 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIG 297
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY EALLLF EM S PN VT L ++ AC +LG+ +GR H Y I+ +K
Sbjct: 298 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY-IDKRLKG 356
Query: 346 DA---TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
A +LR +++DMYAKCGD++ A +FN I +++SSWN +I G+ MHG + +
Sbjct: 357 VANASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAMHGRADASFDI 414
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLG 461
FS+M + G++PD ITF +LSACSH+G++D GR F MT+ + P+++HY CM+D+LG
Sbjct: 415 FSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLG 474
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVL 516
+G EA +MI M + P+ +W +LL AC++HG + A L ++EPE+ G +VL
Sbjct: 475 HSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVL 534
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
+SNIYA + +W EV R + +KG+KK S IE + F D+ +P +E+Y
Sbjct: 535 LSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 594
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
+E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG+++ P + + KN
Sbjct: 595 LEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 654
Query: 637 LRVCNDCHSAFR 648
LRVC +CH A++
Sbjct: 655 LRVCRNCHEAYK 666
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/571 (41%), Positives = 353/571 (61%), Gaps = 9/571 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L+ACA+ + G+ VHG ++ + L+DMYAKCG D VFD MSVR
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+V+WT +I AY + +EA+ LF + +EG+ D TI +V A G + + VH
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
Y N ++ + N+++ MYA+CG++E A VF M +D+ISWN+M+ GY +N +E
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL LF +M + KP+ T ++ AC L S G++ HG+I+ + D + NA++D
Sbjct: 184 ALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KCG A +F D+ P+ +++ +W V+IAGYGMHG G A+ F++M + G++PD
Sbjct: 243 MYVKCGVPVLARLLF-DMIPT-KDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
++F SIL ACSH+GL+DEG + F M + +VKP+++HYAC+VD+L R+G L A+ IK
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
MP+ P+ ++WGALL CRIH E A ++F+LEPE+TGY+VL++N YA + KW E
Sbjct: 361 SMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEE 420
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V KLR+ + +GLKK S IE + F + +P K++ ++ + ++K GY
Sbjct: 421 VKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGY 480
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
P AL + + +E L HSEKLA+AFGI+NL P ++V+KNLRVC DCH +F
Sbjct: 481 FPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKF 540
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS R+I++RD+NRFHHF+ G C C +W
Sbjct: 541 ISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 185/347 (53%), Gaps = 5/347 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W ++I AYA G E + L+ M R G+S + +T VL ACA N + GK VH I
Sbjct: 67 WTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIR 126
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
S+ +V AL+DMYAKCG +D VF EM V+D++SW MI Y + P EAL
Sbjct: 127 ENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALS 186
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF E + D T+ + A L + + + VHG+ + N F D + N++V MY
Sbjct: 187 LFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYV 245
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG ARL+FDM+ +DLI+W M+ GY +G + A+ F+EM+ + +P+ V+ +
Sbjct: 246 KCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFIS 305
Query: 318 LVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC++ G G +F + + N+K ++D+ A+ G L A + P
Sbjct: 306 ILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSM-PI 364
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
E + + W L++G +H H K E ++ + E ++P++ + +L+
Sbjct: 365 EPDATIWGALLSGCRIH-HDVKLAEKVAEHVFE-LEPENTGYYVLLA 409
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 152/289 (52%), Gaps = 16/289 (5%)
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAI--CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
+VS+ A GDV +AVHG + C + C N+++ MYA+CG ++ A LVFD+
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFC--NTLLDMYAKCGVLDGAILVFDL 58
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M R +++W S++ Y + G + EA+ LF EM P+ T ++ AC GS + G
Sbjct: 59 MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ H YI ++M+ + + NA+MDMYAKCG ++ A ++F ++ +++ SWN +I GY
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEM--PVKDIISWNTMIGGYS 176
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
+ +AL F M+ E +KPD T IL AC+ +D G++ + + + +
Sbjct: 177 KNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQ 235
Query: 452 HYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV-WGALLLACRIHG 496
+VDM + G A FDMI P D + W ++ +HG
Sbjct: 236 VANALVDMYVKCGVPVLARLLFDMI-----PTKDLITWTVMIAGYGMHG 279
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/637 (37%), Positives = 381/637 (59%), Gaps = 11/637 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y +G +A +LF+ + S WN+MI NG LE++ M G+
Sbjct: 236 LIAAYFKFGGVESAHNLFDELSEPDVVS--WNSMINGCVVNGFSGNGLEIFIQMLILGVE 293
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ T VL ACA+ + G+ +HG ++ F + L+DMY+KCG + +V
Sbjct: 294 VDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEV 353
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F +M +VSWT +I AY + +A+ LF + Q +G+ D T+ S+ A +
Sbjct: 354 FVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSL 413
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
K + VH Y I N +L + N+++ MYA+CG+VE+ARLVF + +D++SWN+M+ GY
Sbjct: 414 DKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGY 473
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
QN +EAL LF +MQ KP+ +T ++ AC L + GR+ HG+I+ D
Sbjct: 474 SQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL 532
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ A++DMYAKCG L A+ +F D+ P ++++ SW V+IAGYGMHG G +A+ F++M
Sbjct: 533 HVACALVDMYAKCGLLVLAQLLF-DMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMR 590
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCL 466
G++PD +F++IL+ACSH+GL++EG K F M + V+P+++HYAC+VD+L R G L
Sbjct: 591 IAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNL 650
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIY 521
+A+ I+ MP+ P+ ++WG LL CRIH E A ++F+LEP++T Y+V+++N+Y
Sbjct: 651 SKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVY 710
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A + KW EV KLR+ M+ +G K+ S IE G F + +P K++ + +
Sbjct: 711 AEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLT 770
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
++++ Y L + +D ++E + HSEK A+AFGI+NL P V+V+KN RVC
Sbjct: 771 MQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCG 830
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
DCH +F+S + +I++RD+NRFHHF+ G CSC D
Sbjct: 831 DCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 291/550 (52%), Gaps = 30/550 (5%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGL-INQALHLGAKIIIKYTTYGEPNTARSLFNS 67
Y +L+ C SL +++HS + ++G+ +++AL GAK++ Y G+ R +F+
Sbjct: 97 YCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEAL--GAKLVFMYVNCGDLVQGRKIFDK 154
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I NDK FLWN ++ YA G+ E++ L+ M++ G+ N YTF VLK A+ +
Sbjct: 155 IMNDKV--FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVK 212
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
E K VHG +++ GF S++ V +L+ Y K G + +FDE+S D+VSW MI
Sbjct: 213 ECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCV 272
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
L +F + G+ D T+VSV A +G++ +A+HG+ + F E++
Sbjct: 273 VNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVV 332
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
N+++ MY++CGN+ A VF M ++SW S++ Y++ G S+A+ LFDEMQ+
Sbjct: 333 FSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKG 392
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+P+ T +V AC S GR H Y+I + M + + NA+++MYAKCG ++ A
Sbjct: 393 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 452
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ I +++ SWN +I GY + +ALE F M ++ KPD IT +L AC+
Sbjct: 453 LVFSKI--PVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAG 509
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYAC-MVDMLGRAGCLYEA---FDMIKQMPLPPNDS 483
+D+GR+ + + ++ H AC +VDM + G L A FDMI P D
Sbjct: 510 LAALDKGREIHGHILRRGYFSDL-HVACALVDMYAKCGLLVLAQLLFDMI-----PKKDL 563
Query: 484 V-WGALLLACRIHG---EIAANY----LFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ W ++ +HG E + + + +EP+ + + ++ N + S E K
Sbjct: 564 ISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAIL-NACSHSGLLNEGWKFFN 622
Query: 536 DMKNKGLKKP 545
M+N+ +P
Sbjct: 623 SMRNECGVEP 632
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 204/400 (51%), Gaps = 4/400 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N I + G +EL + + + NSY VL+ CA + +GK VH II
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCS--VLQLCAEKKSLEDGKRVHSVIIS 122
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G D + A LV MY CG G K+FD++ + W ++++ Y + E++ L
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F+K Q+ G++ + T V LG V + + VHGY + F + + NS++A Y +
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 242
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G VE A +FD + + D++SWNSM+ G + NG + L +F +M + + T + +
Sbjct: 243 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSV 302
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ AC +G+ LGR HG+ + + + N ++DMY+KCG+L+ A +F + +
Sbjct: 303 LVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVF--VKMGDT 360
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+ SW +IA Y G A+ F +M +GV+PD T TSI+ AC+ + +D+GR
Sbjct: 361 TIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVH 420
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
+ + K + + +++M + G + EA + ++P+
Sbjct: 421 SYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 460
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/676 (36%), Positives = 390/676 (57%), Gaps = 54/676 (7%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSLFNSIHND 71
LL++ L + QIH+ + + L L AK++ + N ARS+F+ I +
Sbjct: 9 LLQNATKLNQIIQIHALIIKTSLDGNNFVL-AKLLRRLFACSSANDLLYARSVFDEIPSP 67
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGK 130
+ F+WNTMIRAY N+ + E++ L+ MR + I +SY+ V++AC G+
Sbjct: 68 DT--FIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+H +++ G SD +V+ AL++MYAK G + + DEM+ DLV + V++ Y +
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVG 185
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+ A LF + + L+S N
Sbjct: 186 EINLAHDLFDRMPERDLVS---------------------------------------WN 206
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ +A G+V A+ +FD +RDLISW+SM+ Y + Q++EAL LF EMQ ++ P
Sbjct: 207 TMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLP 266
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ VT + ++SAC +G+ +G+ H I + ++ID L +++DMYAKCGD+D + +F
Sbjct: 267 DKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVF 326
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
N + + R+V +W+ +I G HG G AL+ FS+M+ E +KP+ +TF +LSACSH GL
Sbjct: 327 NGM--NNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGL 384
Query: 431 IDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+DEG F M+K+ V P+++HY C+VD+LGRAG L EA ++IK MP P+ VW ALL
Sbjct: 385 VDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALL 444
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACRI+ E A L +LEP G +VL+SNIY+ + +W +V +R MKN ++K
Sbjct: 445 GACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQK 504
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE + F D+ +P K++ + + + +K GY P + L D ++++
Sbjct: 505 VPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKE 564
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E+ L +HSEKLA+AFG+++ P + +++ KNLRVC+DCH A + IS Y+R+IIVRD N
Sbjct: 565 KENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRN 624
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G+CSC DYW
Sbjct: 625 RFHHFVNGSCSCKDYW 640
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/607 (37%), Positives = 362/607 (59%), Gaps = 46/607 (7%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAAL----VDMYAKCGQTDDGCKVFDE 170
F L+ C+ + + K++H +IRT + D + + L VD + D ++F +
Sbjct: 22 FSLETCSDLTHL---KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQ 78
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+ +L + MI + ++ P++A + ++Q++GLL D++T + + +L +
Sbjct: 79 IQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMG 138
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYA-------------------------------RC 259
HG+ I + F +D+ +QNS+V MYA +C
Sbjct: 139 SQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKC 198
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G+VE AR +FD M +++L++W++M++GY QN +A+ LF +Q+ + N + ++
Sbjct: 199 GDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVI 258
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
S+C +LG+ +LG + H Y++ + M ++ L A++DMYA+CG +D A +F D+ ER+
Sbjct: 259 SSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDL--PERD 316
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
SW LIAG MHG+ ++L++F+ M+E G+ P ITFT++LSACSH GL++ G + F
Sbjct: 317 TLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFE 376
Query: 440 DMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--- 495
M + V+P ++HY CMVD+LGRAG L EA + +MP+ PN VWGALL ACRIH
Sbjct: 377 SMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNA 436
Query: 496 --GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
GE L QL P+H+GY+VL+SNIYA + +W +V ++R+ MK KGLKKP S+IE
Sbjct: 437 EIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIEL 496
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F D +P ++ + E + + I+ AGY + + AL D+++E++E L+ HS
Sbjct: 497 DGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKESALHRHS 556
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLA+AFG+M +++ KNLRVC DCH+A + IS ++ R++IVRD NRFHHF G
Sbjct: 557 EKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFHHFRQGL 616
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 617 CSCMDYW 623
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 216/455 (47%), Gaps = 64/455 (14%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL-------FNSI 68
L++C+ L L+ IH+ + + +I A +I + +P++ SL F+ I
Sbjct: 24 LETCSDLTHLKIIHAYMIRTHIICDVF--AASRLIAFCV--DPSSGTSLIDYASRIFSQI 79
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
N F++N MIR ++ + + + Y +R G+ ++ TFPF++K+C I
Sbjct: 80 QNPNL--FIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISM 137
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYA-------------------------------K 157
G HG II+ GF D YVQ +LV MYA K
Sbjct: 138 GSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNK 197
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
CG + K+FD+M ++LV+W+ MI+ Y Q ++A+ LF+ Q +G+ ++ +VSV
Sbjct: 198 CGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSV 257
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
S+ LG + + H Y + N +L + ++V MYARCG+++KA VF+ + +RD
Sbjct: 258 ISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDT 317
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
+SW +++ G +G + +L F M + P +T ++SAC++ G + G+
Sbjct: 318 LSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVE-----RGF 372
Query: 338 IINSNMKIDATLR------NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
I +MK D + ++D+ + G L+ AE + P + N W L+
Sbjct: 373 QIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKM-PVKPNAPVWGALLGACR 431
Query: 392 MHGH---GRKALEFFSQMLEEGVKPDHITFTSILS 423
+H + G + + Q+L P H + +LS
Sbjct: 432 IHKNAEIGERVGKILIQLL-----PQHSGYYVLLS 461
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/608 (37%), Positives = 358/608 (58%), Gaps = 9/608 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N ++ + + C + + + G N YTF +LK CAS + EGK +HG +I+
Sbjct: 160 NNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIK 219
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
+G DS++ +LV++YAKCG + CKVF E+ RD+VSWT +IT + AE L +
Sbjct: 220 SGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGF-VAEGYGSGLRI 278
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F + EG + T +S+ + L DV + VH + N+ + + ++V MYA+
Sbjct: 279 FNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAK 338
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
+E A +F+ + KRDL +W ++ GY Q+GQ +A+ F +MQ KPN T
Sbjct: 339 NRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASS 398
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+S C+ + + GR+ H I + D + +A++DMYAKCG ++ AE +F+ + R
Sbjct: 399 LSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL--VSR 456
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+ SWN +I GY HG G KAL+ F ML+EG PD +TF +LSACSH GLI+EG+K F
Sbjct: 457 DTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHF 516
Query: 439 ADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
++K+ + P ++HYACMVD+LGRAG +E I++M L N +W +L AC++HG
Sbjct: 517 NSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGN 576
Query: 498 I-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
I AA LF+LEPE ++L+SN++AA W +V +R M +G+KK S +E
Sbjct: 577 IEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVE 636
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYH 612
+ F + D +P +E++ K++ + ++ GY P+ LH+V D +++ +L YH
Sbjct: 637 VNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYH 696
Query: 613 SEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
SE+LA+AF +++ + +++ KNLR+C DCH + IS I ++++VRD N FHHF+ G
Sbjct: 697 SERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNG 756
Query: 673 TCSCNDYW 680
+CSC ++W
Sbjct: 757 SCSCQNFW 764
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 217/424 (51%), Gaps = 12/424 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN + + + E ++L+ MR + I N + F ++ A AS G+ +H +
Sbjct: 58 WNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVC 117
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ GF SD + A V MY K ++G + F M + +L S +++ + E ++
Sbjct: 118 KYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPR 177
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
+ + EG + T +S+ GD+ + +A+HG I + D + NS+V +YA
Sbjct: 178 ILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYA 237
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG+ A VF + +RD++SW +++TG++ G S L +F++M PN T +
Sbjct: 238 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFIS 296
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ +C+ L LG++ H I+ +++ + + A++DMYAK L+ AE +FN + +
Sbjct: 297 ILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL--IK 354
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
R++ +W V++AGY G G KA++ F QM EGVKP+ T S LS CS +D GR+
Sbjct: 355 RDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL 414
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV-WGALLLACR 493
+ K ++ + +VDM + GC+ +A FD L D+V W ++
Sbjct: 415 HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFD-----GLVSRDTVSWNTIICGYS 469
Query: 494 IHGE 497
HG+
Sbjct: 470 QHGQ 473
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 230/457 (50%), Gaps = 26/457 (5%)
Query: 8 TEGF------YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEP 58
EGF + +LK+C L + IH + SG IN HL ++ Y G
Sbjct: 184 VEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSG-INPDSHLWNSLVNVYAKCGSA 242
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
N A +F I S W +I + G+ L +++ M G + N YTF +L+
Sbjct: 243 NYACKVFGEIPERDVVS--WTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILR 299
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
+C+S S + GK VH I++ + +V ALVDMYAK +D +F+ + RDL +
Sbjct: 300 SCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFA 359
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
WTV++ Y Q + E+A+ F + Q+EG+ + T+ S S ++ + + +H AI
Sbjct: 360 WTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAI 419
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
D+ + +++V MYA+CG VE A +VFD + RD +SWN+++ GY Q+GQ +AL
Sbjct: 420 KAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALK 479
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDM 356
F+ M + P+ VT + ++SAC+++G + G+K H ++ I T+ + ++D+
Sbjct: 480 AFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK-HFNSLSKIYGITPTIEHYACMVDI 538
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH----GRKALEFFSQMLEEGVK 412
+ G E+ ++ + NV W ++ MHG+ R A++ F LE +
Sbjct: 539 LGRAGKFHEVESFIEEMKLTS-NVLIWETVLGACKMHGNIEFGERAAMKLFE--LEPEID 595
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
++I +++ +A G+ D+ A M+ VK E
Sbjct: 596 SNYILLSNMFAA---KGMWDDVTNVRALMSTRGVKKE 629
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 165/334 (49%), Gaps = 3/334 (0%)
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+I+ G DS++ ++LV++Y KC +V +EM ++D+ W +++ +EA
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+ LF + + + S+ SA LGD +++H F D+ I N+ V M
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y + +VE F M +L S N++L+G+ + + ++ +PN T
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ ++ C G G+ HG +I S + D+ L N+++++YAKCG + A +F +I
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEI-- 252
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
ER+V SW LI G+ G+G L F+QML EG P+ TF SIL +CS +D G+
Sbjct: 253 PERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 311
Query: 436 KCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
+ A + K S+ +VDM + L +A
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDA 345
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/662 (35%), Positives = 382/662 (57%), Gaps = 17/662 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ + G +A+ + +I Y+ G AR +F+ + + WN+MI Y
Sbjct: 215 QVHAMVVKHGF-EEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVT--WNSMIAGYV 271
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG +E E+++ M+ +G+ TF V+K+CAS + K++ +++GF +D
Sbjct: 272 RNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQI 331
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSV-RDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V AL+ +KC + DD +F M +++VSWT MI+ Q ++A+ LF + ++E
Sbjct: 332 VITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRRE 391
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + T SA+ + + +H I + + +++ Y + GN A
Sbjct: 392 GVKPNHFTY----SAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDA 447
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC-TY 324
VF+++E +DL++W++ML GY Q G+ EA LF ++ KPN T +++AC +
Sbjct: 448 VKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASP 507
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
+ + G++FH Y I + + +A++ MYAK G++D+A +F ER++ SWN
Sbjct: 508 TAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFK--RQKERDLVSWN 565
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
+I+GY HG +KALE F +M + + D +TF +++AC+HAGL+++G+K F M
Sbjct: 566 SMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMIND 625
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
+ P +KHY+CM+D+ RAG L +A +I +MP PP +VW LL A R+H GE+
Sbjct: 626 HHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGEL 685
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
AA L L+PE + +VL+SN+YAA+ W+E +R+ M + +KK +S IE
Sbjct: 686 AAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTY 745
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D +P ++Y K+ +++ +K AGY PD HD+EDE +E +L++HSE+LA+
Sbjct: 746 SFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAI 805
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AFG++ PE +Q+ KNLRVC DCH+ + +S + +R I+VRD+NRFHHF+ G CSC D
Sbjct: 806 AFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGD 865
Query: 679 YW 680
YW
Sbjct: 866 YW 867
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 198/374 (52%), Gaps = 1/374 (0%)
Query: 50 IKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSN 109
I T P+ A +LF+ I + + N ++ +Y+ + E L L+ ++ S + +
Sbjct: 33 ISNTVLCVPHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPD 92
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD 169
T V CA + G+ VH ++ G + V +LVDMY K +DG +VFD
Sbjct: 93 ESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFD 152
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
EM R++VSWT ++ Y LF + Q EG+L + T+ +V +A+ G V
Sbjct: 153 EMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGI 212
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
VH + + F E + + NS++++Y+R G + AR VFD ME RD ++WNSM+ GY++
Sbjct: 213 GLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVR 272
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
NGQ E +F++MQ + KP +T ++ +C L L + + S D +
Sbjct: 273 NGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV 332
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
A+M +KC ++D A ++F+ + +NV SW +I+G +G +A+ FSQM E
Sbjct: 333 ITALMVALSKCKEMDDALSLFS-LMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRRE 391
Query: 410 GVKPDHITFTSILS 423
GVKP+H T+++IL+
Sbjct: 392 GVKPNHFTYSAILT 405
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 107/213 (50%), Gaps = 4/213 (1%)
Query: 268 VFDMMEKR--DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+FD + R L N +L Y ++ Q EAL LF + +S +P+ T + + C
Sbjct: 47 LFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGS 106
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+LGR+ H + + ++ +++DMY K +++ +F+++ ERNV SW
Sbjct: 107 LDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEM--GERNVVSWTS 164
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
L+AGY +G E F QM EGV P+ T +++++A + G++ G + A + K
Sbjct: 165 LLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHG 224
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
+ + + ++ + R G L +A D+ +M +
Sbjct: 225 FEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI 257
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/665 (35%), Positives = 384/665 (57%), Gaps = 18/665 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H SGL + + + ++ Y+ G AR +FN + + S WN+MI +
Sbjct: 924 KQVHGIAVKSGL-DSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLIS--WNSMISSC 980
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG----KVVHGDIIRTGF 141
A + E++ L+ + G+ + +T VL+AC+S +++G + +H ++TG
Sbjct: 981 AQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS---LIDGLNISRQIHVHALKTGN 1037
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
++DS+V L+D+Y+K G+ ++ +F DL W M+ Y ++AL LF
Sbjct: 1038 IADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSL 1097
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G SD +T+ + A A G L + + + +H +AI F DL + + I+ MY +CG+
Sbjct: 1098 IHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD 1157
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+ A +VF+ + D ++W SM++G + NG +AL ++ M+ S P+ T L+ A
Sbjct: 1158 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 1217
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
+ + + + GR+ H +I + D + +++DMYAKCG+++ A +F ++ RN++
Sbjct: 1218 SSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNV--RNIA 1275
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
WN ++ G HG+ +A+ F M G++PD ++F ILSACSHAGL E + M
Sbjct: 1276 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 1335
Query: 442 -TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-- 498
++PE++HY+C+VD LGRAG + EA +I+ MP + S+ ALL ACRI G++
Sbjct: 1336 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVET 1395
Query: 499 ---AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
A LF LEP + +VL+SNIYAA+N+W +V R+ MK K +KK FS I+
Sbjct: 1396 GKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKN 1455
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F DR +P +Y KVE M I+ GY+PD L DVEDE++E L YHSEK
Sbjct: 1456 MLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEK 1515
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+A+G+++ ++V KNLRVC DCH+A ++IS ++ R+I++RDANRFHHF G CS
Sbjct: 1516 LAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCS 1575
Query: 676 CNDYW 680
C DYW
Sbjct: 1576 CGDYW 1580
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 231/461 (50%), Gaps = 13/461 (2%)
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
S+ +D F WN + G +E + M I ++ T VL A A +
Sbjct: 861 SLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDL 920
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
GK VHG +++G SD V +LV+MY+K G +VF++M DL+SW MI++
Sbjct: 921 ELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSC 980
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLED 245
Q+ EE++ LF EGL D T+ SV A L D L ++ +H +A+ + D
Sbjct: 981 AQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIAD 1040
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ +++ +Y++ G +E+A +F + DL WN+M+ GYI +AL LF +
Sbjct: 1041 SFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHK 1100
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
S K + +T AC L G++ H + I + D + + ++DMY KCGD+
Sbjct: 1101 SGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVN 1160
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +FN I S + +W +I+G +G+ +AL + +M + V PD TF +++ A
Sbjct: 1161 AGIVFNYI--SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKAS 1218
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
S +++GR+ A++ KL + +VDM + G + +A+ + K+M + N ++W
Sbjct: 1219 SCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNV-RNIALW 1277
Query: 486 GALLLACRIHG--EIAANYLFQ------LEPEHTGYFVLMS 518
A+L+ HG E A N LF+ +EP+ + ++S
Sbjct: 1278 NAMLVGLAQHGNAEEAVN-LFKSMKSHGIEPDRVSFIGILS 1317
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 192/413 (46%), Gaps = 45/413 (10%)
Query: 29 HSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA-- 86
H+ + SG L ++ Y+ G ++AR +F++ + WN ++ AYA
Sbjct: 644 HARIVVSGSAGDHF-LSNNLLTMYSKCGSLSSARQVFDTTPERDLVT--WNAILGAYAAS 700
Query: 87 ---NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS 143
N+G+ E L L+ +R S S+ T VLK C ++ + + VHG I+ G
Sbjct: 701 VDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEW 760
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D +V ALV++Y+KCG+ D +FD M RD+V W +M+ Y Q +EA LF +
Sbjct: 761 DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 820
Query: 204 QEGLLSDSVTIVSVASAVGQL----GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ GL D ++ + + V ++ G L Q V YA + +D
Sbjct: 821 RSGLRPDEFSVQLILNGVSEVNWDEGKWLADQ-VQAYAAKLSLSDD-------------- 865
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
D+ WN L+ + G A+ F M + + VT L+++
Sbjct: 866 --------------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVL 911
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+A +LG++ HG + S + D ++ N++++MY+K G A +FND+ +
Sbjct: 912 AAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDM--KHLD 969
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ SWN +I+ +++ F +L EG+KPDH T S+L ACS LID
Sbjct: 970 LISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS--SLID 1020
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 172/388 (44%), Gaps = 45/388 (11%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L+ S +L GK H I+ +G D ++ L+ MY+KCG +VFD RD
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 176 LVSWTVMITAYEQA-----EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
LV+W ++ AY + +E L LF+ + + +T+ V G + A
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ VHGYAI D+ + ++V +Y++CG + ARL+FD M +RD++ WN ML GY+Q
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 291 GQASEALLLFDEMQNSDCKPNPVTA-LIL--VSACTYLGSRQLGRKFHGYIINSNMKIDA 347
G EA LF E S +P+ + LIL VS + + L + Y
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAY---------- 856
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
A+ +D +P +V WN ++ G A+E F M
Sbjct: 857 -----------------AAKLSLSDDNP---DVFCWNKKLSECLWAGDNWGAIECFVNMN 896
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
+ D +T +L+A + ++ G++ K + +V +V+M + GC Y
Sbjct: 897 GLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAY 956
Query: 468 ---EAFDMIKQMPLPPNDSVWGALLLAC 492
E F+ +K + L W +++ +C
Sbjct: 957 FAREVFNDMKHLDLIS----WNSMISSC 980
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/683 (35%), Positives = 376/683 (55%), Gaps = 66/683 (9%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTT--YGEPNTARS 63
P TE L ++C + L+QIHS +G+I + + KI+ + +G+ AR
Sbjct: 11 PVTENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPI-IQNKILSFCCSREFGDMCYARQ 69
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
LF++I +S WN M + Y+ + LY M + + YT+PF+ K +
Sbjct: 70 LFDTIPEPSVFS--WNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRS 127
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ G+ +H +++ G S+ + AL++MY+ CG D +FD D+V+W MI
Sbjct: 128 VALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMI 187
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
+ GY N
Sbjct: 188 S--------------------------------------------------GY---NRIK 194
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+D+ +IV + G V+ AR F M +RD +SW +M+ GY++ EAL+LF EM
Sbjct: 195 KDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREM 254
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
Q S KP+ T + +++AC LG+ +LG YI + +K D + NA++DMY KCG++
Sbjct: 255 QTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNV 314
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ A ++FN + +R+ +W ++ G ++G G +AL FSQML+ V PD +T+ +LS
Sbjct: 315 EMALSIFNTL--PQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLS 372
Query: 424 ACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
AC+H G++DEG+K FA MT + ++P + HY CMVD+LG+AG L EA ++IK MP+ PN
Sbjct: 373 ACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432
Query: 483 SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
VWGALL ACRIH E A + +LEP + +VL NIYAA NKW ++ +LR+ M
Sbjct: 433 IVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVM 492
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
++G+KK S+IE + F D+ +P KE+Y K+ M ++K+AGY P+ S
Sbjct: 493 MDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVF 552
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
D+ +ED+E+ + HSEKLA+AFG++N P +++ KNLR+C DCH + +S +Y R+
Sbjct: 553 LDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDRE 612
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
+IVRD RFHHF G+CSC DYW
Sbjct: 613 VIVRDRTRFHHFRHGSCSCKDYW 635
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/629 (37%), Positives = 375/629 (59%), Gaps = 31/629 (4%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV---VHG 134
W+++I+ Y ++ + +++MR + N + FP +LKA ++L+ K+ +H
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKA---STLLKHHKLAHSLHA 134
Query: 135 DIIRTGFLSDSYVQAALVDMYAKC-------------GQTDDGC--KVFDEMSVRDLVSW 179
+R G SD Y+ AL++ YAK G++ C KVFD M VRD+VSW
Sbjct: 135 CTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSW 194
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
+I + Q EAL + ++ + G L DS T+ S+ + DV K + +HGYA+
Sbjct: 195 NTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAV 254
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
N F D+ I +S++ MYA+C +E + F ++ ++D ISWNS++ G +QNG+ L
Sbjct: 255 RNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLG 314
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
F M + KP V+ ++ AC +L + LGR+ HG I+ + + ++++DMYA
Sbjct: 315 FFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYA 374
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG++ A +F+ I +R++ +W +I G MHGH A+ F MLE+GV+P ++ F
Sbjct: 375 KCGNIKMARYVFDRI--DKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAF 432
Query: 419 TSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
++L+ACSHAGL+DEG + F M + + P ++HYA + D+LGRAG L EA+D I M
Sbjct: 433 MAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMR 492
Query: 478 -LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
+ P SVW LL ACR H E + L ++ E+ G +VLMSNIY+A+ +W++
Sbjct: 493 GVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAA 552
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
+LR M+ KGLKK A S IE G + F D+ +PY+ ++ K ++ + +++ GY+
Sbjct: 553 RLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVI 612
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
D + LHDV++E + +L+ HSE+LA+A+GI++ T ++V KN+RVC DCH+A +FI+
Sbjct: 613 DTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFIT 672
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I R+I VRD +RFHHF+ G+CSC DYW
Sbjct: 673 KIVGREITVRDNSRFHHFKNGSCSCGDYW 701
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/673 (36%), Positives = 379/673 (56%), Gaps = 12/673 (1%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L + LAS Q+++ + + L +++L G I Y G + A FN I + +
Sbjct: 21 LFRFTKTLASNHQLNAQILVNAL-HRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLH 79
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
S WNT++ +++ N + L+L+ M + G +S+ F +KAC SL K+ H
Sbjct: 80 S--WNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHS 137
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
I+ D YV AL+++Y + G ++ KVF+E+ +++ V W VMI + +
Sbjct: 138 LAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFG 197
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIV 253
LF + ++ G D + + A G + + + HG I F++ + +Q S+V
Sbjct: 198 VFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLV 257
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
MY +CG ++ A +F+ + RD++ W++++ G+ +NG+A E++ +F +M PN V
Sbjct: 258 DMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSV 317
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T +V AC+ LGS + GR HGY+I + +++D + +DMYAKCG + TA +F I
Sbjct: 318 TFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQI 377
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
E+NV SW+ +I G+GMHG +AL F +M P+ +TF S+LSACSH+G I+E
Sbjct: 378 --PEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEE 435
Query: 434 GRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
G F M++ + P +HYACMVD+LGRAG + EA I MP P S WGALL AC
Sbjct: 436 GWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGAC 495
Query: 493 RIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
RIH E A L LE + +G +V++SNIYA W V K R M KG+ K
Sbjct: 496 RIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVG 555
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
F+ IE + + F + DR ++ S+ ++ GY+PDL LHDV+DE ++
Sbjct: 556 FTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQE 615
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
+L HSEKLA+ FG++N +++TKN+RVC DCH+A +FIS I RRKII+RD RFH
Sbjct: 616 VLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFH 675
Query: 668 HFEGGTCSCNDYW 680
H + G CSC DYW
Sbjct: 676 HVQDGVCSCGDYW 688
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/686 (36%), Positives = 390/686 (56%), Gaps = 27/686 (3%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
S G +DQ L Q+H++ G L + +I Y + A S+F+
Sbjct: 15 SKNGLFDQGL----------QVHAAAVNMGF-GFDLIMNNDLIDMYGKCSRVDLACSVFD 63
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ S W ++ Y G+ +L L M SG+ N +TF LKAC + ++
Sbjct: 64 RMLERNVVS--WTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVV 121
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
G +HG +++GF S V A +DMY+KCG+ +VF++M R+LVSW MI +
Sbjct: 122 ENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGH 181
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
++L+LFQ+ Q +G + D T S A G LG + +H I F +
Sbjct: 182 THEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISI 241
Query: 247 --CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
I ++IV +YA+CG + +A+ VFD +E+++LISW++++ G+ Q G EA+ LF +++
Sbjct: 242 RNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLR 301
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
S + I++ L + G++ H YI+ +D ++ N+++DMY KCG +
Sbjct: 302 ESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTE 361
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
AE +F+++ RNV SW V+I GYG HG G KA+ F++M +G++ D + + ++LSA
Sbjct: 362 EAERLFSEMQV--RNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSA 419
Query: 425 CSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CSH+GLI E ++ F+ + +KP ++HYACMVD+LGRAG L EA ++I+ M L PN+
Sbjct: 420 CSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEG 479
Query: 484 VWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
+W LL ACR+HG + LF+++ ++ +V+MSNIYA + W+E ++R+ +K
Sbjct: 480 IWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVK 539
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCAL 597
KGLKK A S +E K+I F+ D +P +++++ ++ M +K GY L AL
Sbjct: 540 AKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFAL 599
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPE---AVVQVTKNLRVCNDCHSAFRFISYIY 654
HDVE+E +E L HSEKLA+ ++ E V++V KNLRVC DCH + +S I
Sbjct: 600 HDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKIL 659
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
++ +VRDANRFH FE G CSC DYW
Sbjct: 660 KKVFVVRDANRFHRFEDGLCSCGDYW 685
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/665 (37%), Positives = 388/665 (58%), Gaps = 14/665 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++H + +GLI+ + L ++ Y G + A +F + S WNT+I
Sbjct: 394 REVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVS--WNTIISVL 451
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NG C + Y MR+ IS +++ L +CAS L+ G+ VH D ++ G D+
Sbjct: 452 DQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDT 511
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE-EALILFQKTQQ 204
V ALV MY CG + ++F+ M+ D+VSW ++ + P E++ +F +
Sbjct: 512 SVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMR 571
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
GL + VT V++ SA+ L + + VH + + +ED + N++++ YA+ G+++
Sbjct: 572 SGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDS 631
Query: 265 ARLVFDMME-KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+F M +RD +SWNSM++GYI NG E + M +S+ + T I+++AC
Sbjct: 632 CEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACA 691
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ + + G + H + I S ++ D + +A++DMY+KCG +D A +FN + S++N SW
Sbjct: 692 SVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSM--SQKNEFSW 749
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I+GY HG G KALE F +M G PDH+TF S+LSACSHAGL+D G F M
Sbjct: 750 NSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMED 809
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-------- 495
+ P ++HY+C++D+LGRAG L + + I +MP+ PN +W +L+ACR
Sbjct: 810 HGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDL 869
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G+ A+ L +LEP++ +VL SN YAA+ +W + K R M +KK A S + G
Sbjct: 870 GKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGD 929
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F DR +P KE+Y+K+ + +IK AGY+P AL+D+E+E++E +L+YHSEK
Sbjct: 930 GVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEK 989
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVAF + + + +++ KNLRVC DCH+AFR+IS I R+II+RD+ RFHHFE G CS
Sbjct: 990 LAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCS 1049
Query: 676 CNDYW 680
C DYW
Sbjct: 1050 CGDYW 1054
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 226/459 (49%), Gaps = 42/459 (9%)
Query: 12 YDQLLKSC-----NFLASLRQIHSSLTTSGLINQALHLGAKIIIK--YTTYGE-----PN 59
+ +L++C + LA Q+H GL+++ ++ + + YG P
Sbjct: 163 FGSVLRACQDAGPDLLAFAVQVH------GLVSKTIYASNTTVCNALISMYGNCSVGLPL 216
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG----ISSNSYTFPF 115
A+ +F++ + WN ++ YA G+ V T L+ M + N +TF
Sbjct: 217 QAQQVFDTTPVRDLIT--WNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGS 274
Query: 116 VLKA-----CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
++ A C+S L V ++++G SD YV +ALV +A+ G D+ +F
Sbjct: 275 LITATSLSSCSSGVL----DQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFIN 330
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG----D 226
+ R+ V+ +I + EEA+ +F T ++ + ++ T V + SAV +
Sbjct: 331 LKERNAVTLNGLIVGLVKQHCSEEAVGIFMGT-RDSFVVNTDTFVVLLSAVAEFSIPEDG 389
Query: 227 VLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+++ + VHG+ + ++ + + N +V MYA+CG ++KA VF ++ RD +SWN++++
Sbjct: 390 LMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIIS 449
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
QNG A++ + M+ P+ A+ +S+C L G++ H + + +
Sbjct: 450 VLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDL 509
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA-GYGMHGHGRKALEFFS 404
D ++ NA++ MY CG + +FN + +E ++ SWN ++ H +++E FS
Sbjct: 510 DTSVSNALVKMYGDCGARSESWEIFNSM--AEHDIVSWNSIMGVMVSSHAPTAESVEVFS 567
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
M+ G+ P+ +TF ++LSA S +++ G++ A + K
Sbjct: 568 NMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLK 606
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 152/316 (48%), Gaps = 17/316 (5%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++++ G D ++ LV++YAK + +VFD M R+ VSWT +++ Y +
Sbjct: 78 LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGI 137
Query: 192 PEEALILFQKTQQEG---LLSDSVTIVSVASAVGQLGDVLKAQA--VHGYAICNAFLEDL 246
+EA +F+ EG T SV A G L A A VHG + +
Sbjct: 138 TDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNT 197
Query: 247 CIQNSIVAMYARC--GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ N++++MY C G +A+ VFD RDLI+WN++++ Y + G LF M
Sbjct: 198 TVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAML 257
Query: 305 NSDC----KPNPVT--ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
+ D +PN T +LI ++ + S L + F ++ S D + +A++ +A
Sbjct: 258 HDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVF-ARVLKSGSSSDLYVGSALVSAFA 316
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+ G LD A+++F I+ ERN + N LI G +A+ F + V + TF
Sbjct: 317 RHGMLDEAKDIF--INLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVV-NTDTF 373
Query: 419 TSILSACSHAGLIDEG 434
+LSA + + ++G
Sbjct: 374 VVLLSAVAEFSIPEDG 389
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 20/263 (7%)
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
G+ + +H + DL + N +V +YA+ + AR VFD M +R+ +SW ++
Sbjct: 70 GEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLV 129
Query: 285 TGYIQNGQASEALLLFDEM--QNSD-CKPNPVTALILVSACTYLGSRQL--GRKFHGYII 339
+GY+ +G EA +F M + S+ +P P T ++ AC G L + HG +
Sbjct: 130 SGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVS 189
Query: 340 NSNMKIDATLRNAVMDMYAKC--GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ + T+ NA++ MY C G A+ +F D P R++ +WN L++ Y G+
Sbjct: 190 KTIYASNTTVCNALISMYGNCSVGLPLQAQQVF-DTTPV-RDLITWNALMSVYAKKGYVV 247
Query: 398 KALEFFSQMLEEG----VKPDHITFTSILSACS----HAGLIDEGRKCFADMTKLSVKPE 449
F ML + ++P+ TF S+++A S +G++D+ FA + K +
Sbjct: 248 STFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQ---VFARVLKSGSSSD 304
Query: 450 VKHYACMVDMLGRAGCLYEAFDM 472
+ + +V R G L EA D+
Sbjct: 305 LYVGSALVSAFARHGMLDEAKDI 327
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/706 (35%), Positives = 389/706 (55%), Gaps = 45/706 (6%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C+ + +L Q+H ++ GL + + +I Y G+ + R LF+ +
Sbjct: 136 LLSACSKILALSEGVQVHGAVLKMGL-EGDIFVSNSLIHFYAECGKVDLGRKLFDGMLER 194
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W ++I Y+ E + L+ M +G+ N T V+ ACA + GK
Sbjct: 195 NVVS--WTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKK 252
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
V I G + + ALVDMY KCG ++FDE + ++LV + +++ Y E
Sbjct: 253 VCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEW 312
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ L++ + Q+G D VT++S +A QLGD+ ++ H Y + N I N+
Sbjct: 313 ASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNA 372
Query: 252 IVAMYARCG-------------------------------NVEKARLVFDMMEKRDLISW 280
I+ MY +CG ++E A +FD M +RDL+SW
Sbjct: 373 IIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSW 432
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N+M+ +Q EA+ LF EMQN + VT + + SAC YLG+ L + YI
Sbjct: 433 NTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEK 492
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+++ +D L A++DM+++CGD +A ++F + +R+VS+W I M G+ A+
Sbjct: 493 NDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME--KRDVSAWTAAIGVMAMEGNTEGAI 550
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDM 459
E F++MLE+ VKPD + F ++L+ACSH G +D+GR+ F M K ++P + HY CMVD+
Sbjct: 551 ELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDL 610
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYF 514
LGRAG L EA D+I+ MP+ PND VWG+LL ACR H + AA L QL PE G
Sbjct: 611 LGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIH 670
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
VL+SNIYA++ KW +V ++R MK KG++K S IE I F + D + +
Sbjct: 671 VLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIG 730
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
+E + + AGY+PD + L DV+++++EH+L+ HSEKLA+A+G++ ++V
Sbjct: 731 LMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVV 790
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C+DCHS + +S +Y R+I VRD NR+H F+ G CSC DYW
Sbjct: 791 KNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 154/522 (29%), Positives = 256/522 (49%), Gaps = 38/522 (7%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLI--NQALHLGAKII--IKYTTYG 56
++ P T +LL +C L L+Q+H + GL+ A +L I ++ T
Sbjct: 17 LKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLE 76
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+ AR+ F + + F++N +IR YA+ G + + LY M GI + YTFPF+
Sbjct: 77 SLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFL 136
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L AC+ + EG VHG +++ G D +V +L+ YA+CG+ D G K+FD M R++
Sbjct: 137 LSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNV 196
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT +I Y + +EA+ LF + + G+ + VT+V V SA +L D+ + V Y
Sbjct: 197 VSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSY 256
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ N++V MY +CG++ AR +FD ++L+ +N++++ Y+ + AS+
Sbjct: 257 ISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDV 316
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L++ DEM +P+ VT L ++AC LG +G+ H Y++ + ++ + NA++DM
Sbjct: 317 LVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDM 376
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-------- 408
Y KCG + A +F H + V +WN LIAG G A F +MLE
Sbjct: 377 YMKCGKREAACKVFE--HMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNT 434
Query: 409 -----------------------EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+G+ D +T I SAC + G +D + + K
Sbjct: 435 MIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKND 494
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
+ +++ +VDM R G A + K+M + S W A
Sbjct: 495 IHVDLQLGTALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTA 535
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 193/379 (50%), Gaps = 11/379 (2%)
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
D+ ++ L + +I Y A ++A++L+ + G++ D T + SA ++ +
Sbjct: 88 DDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALS 147
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+ VHG + D+ + NS++ YA CG V+ R +FD M +R+++SW S++ GY
Sbjct: 148 EGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYS 207
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
+ EA+ LF +M + +PNPVT + ++SAC L +LG+K YI M++
Sbjct: 208 GRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTI 267
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ NA++DMY KCGD+ A +F++ + +N+ +N +++ Y H L +ML+
Sbjct: 268 MVNALVDMYMKCGDICAARQIFDEC--ANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQ 325
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
+G +PD +T S ++AC+ G + G+ A + + ++ ++DM + G
Sbjct: 326 KGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREA 385
Query: 469 AFDMIKQMPLPPNDSV--WGALLLACRIHGEIAANYLF---QLEPEHTGYFVLMSNIYAA 523
A + + M PN +V W +L+ G++ + LE + + ++ +
Sbjct: 386 ACKVFEHM---PNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQV 442
Query: 524 SNKWREVGKLREDMKNKGL 542
S + E +L +M+N+G+
Sbjct: 443 S-MFEEAIELFREMQNQGI 460
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 241/637 (37%), Positives = 377/637 (59%), Gaps = 11/637 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y +G +A +LF+ + S WN+MI NG LE++ M G+
Sbjct: 511 LIAAYFKFGGVESAHNLFDELSEPDVVS--WNSMINGCVVNGFSGNGLEIFIQMLILGVE 568
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ T VL A A+ + G+ +HG ++ F + L+DMY+KCG + +V
Sbjct: 569 VDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEV 628
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F +M +VSWT I AY + +A+ LF + Q +G+ D T+ S+ A +
Sbjct: 629 FVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSL 688
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
K + VH Y I N +L + N+++ MYA+CG+VE+ARLVF + +D++SWN+M+ GY
Sbjct: 689 DKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGY 748
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
QN +EAL LF +MQ KP+ +T ++ AC L + GR+ HG+I+ D
Sbjct: 749 SQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL 807
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ A++DMYAKCG L A+ +F+ I ++++ SW V+IAGYGMHG G +A+ F++M
Sbjct: 808 HVACALVDMYAKCGLLVLAQLLFDMI--PKKDLISWTVMIAGYGMHGFGNEAISTFNEMR 865
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCL 466
G++PD +F+ IL+ACSH+GL++EG K F M + V+P+++HYAC+VD+L R G L
Sbjct: 866 IAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNL 925
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIY 521
+A+ I+ MP+ P+ ++WG LL CRIH E A ++F+LEP++T Y+V+++N+Y
Sbjct: 926 SKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVY 985
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A + KW EV KLR+ M+ +G K+ S IE G F + +P K + + +
Sbjct: 986 AEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLT 1045
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
++++ Y L + +D ++E + HSEK A+AFGI+NL P V+V+KN RVC
Sbjct: 1046 MQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCG 1105
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
DCH +F+S +R+I++RD+NRFHHF+ G CSC D
Sbjct: 1106 DCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 291/550 (52%), Gaps = 30/550 (5%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGL-INQALHLGAKIIIKYTTYGEPNTARSLFNS 67
Y +L+ C SL +++HS + ++G+ I++AL GAK++ Y G+ R +F+
Sbjct: 372 YCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEAL--GAKLVFMYVNCGDLVQGRKIFDK 429
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I NDK FLWN ++ YA G+ E++ L+ M++ G+ N YTF VLK A+ +
Sbjct: 430 IMNDKV--FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVK 487
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
E K VHG +++ GF S++ V +L+ Y K G + +FDE+S D+VSW MI
Sbjct: 488 ECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCV 547
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
L +F + G+ D T+VSV A +G++ +A+HG+ + F E++
Sbjct: 548 VNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVV 607
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
N+++ MY++CGN+ A VF M ++SW S + Y++ G S+A+ LFDEMQ+
Sbjct: 608 FSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKG 667
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+P+ T +V AC S GR H Y+I + M + + NA+++MYAKCG ++ A
Sbjct: 668 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 727
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ I +++ SWN +I GY + +ALE F M ++ KPD IT +L AC+
Sbjct: 728 LVFSKI--PVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAG 784
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYAC-MVDMLGRAGCLYEA---FDMIKQMPLPPNDS 483
+D+GR+ + + ++ H AC +VDM + G L A FDMI P D
Sbjct: 785 LAALDKGREIHGHILRRGYFSDL-HVACALVDMYAKCGLLVLAQLLFDMI-----PKKDL 838
Query: 484 V-WGALLLACRIHG---EIAANY----LFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ W ++ +HG E + + + +EP+ + + V++ N + S E K
Sbjct: 839 ISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVIL-NACSHSGLLNEGWKFFN 897
Query: 536 DMKNKGLKKP 545
M+N+ +P
Sbjct: 898 SMRNECGVEP 907
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 202/400 (50%), Gaps = 4/400 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N I + G +EL + + + NSY VL+ CA + +GK VH II
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCS--VLQLCAEKKSLEDGKRVHSVIIS 397
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G D + A LV MY CG G K+FD++ + W ++++ Y + E++ L
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F+K Q+ G++ + T V LG V + + VHGY + F + + NS++A Y +
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 517
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G VE A +FD + + D++SWNSM+ G + NG + L +F +M + + T + +
Sbjct: 518 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSV 577
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ A +G+ LGR HG+ + + + N ++DMY+KCG+L+ A +F + +
Sbjct: 578 LVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVF--VKMGDT 635
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+ SW IA Y G A+ F +M +GV+PD T TSI+ AC+ + +D+GR
Sbjct: 636 TIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVH 695
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
+ + K + + +++M + G + EA + ++P+
Sbjct: 696 SYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 735
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 243/667 (36%), Positives = 380/667 (56%), Gaps = 13/667 (1%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L + R++H+ + +G A ++ Y+ G+ + A +F + S WN
Sbjct: 218 LEAGRKVHAMVVRTGYDKDVFTANA-LVDMYSKLGDIHMAALVFGKVPKTDVVS--WNAF 274
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG--KVVHGDIIRT 139
I +GH LEL M+ SG+ N +T +LKACA + +HG +I+
Sbjct: 275 ISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKA 334
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
SD Y+ ALVDMYAK G DD KVF+ + +DL+ W +I+ E+L LF
Sbjct: 335 CADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLF 394
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ ++EG + T+ +V + L + VH A FL D + N ++ Y +C
Sbjct: 395 CRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKC 454
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
+ A VF+ ++I++ SM+T Q +A+ LF EM +P+P L+
Sbjct: 455 NCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLL 514
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+AC L + + G++ H ++I D NA++ YAKCG ++ A+ F+ + ++
Sbjct: 515 NACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGL--PDKG 572
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SW+ +I G HGHG++AL+ F +M++E + P+HIT TS+L AC+HAGL+DE + F+
Sbjct: 573 VVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFS 632
Query: 440 DMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--- 495
M ++ + +HY+CM+D+LGRAG L +A +++ MP N +VWGALL A R+H
Sbjct: 633 SMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDP 692
Query: 496 --GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
G++AA LF LEPE +G VL++N YA++ W EV K+R+ MK+ +KK A S +E
Sbjct: 693 ELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVEL 752
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F D+ +P +++Y K+E + + AGY+P+L LHDV+ ++E +L++HS
Sbjct: 753 KDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHS 812
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
E+LAVAF +++ A ++V KNLR+C DCH AF+FIS I R+II+RD NRFHHF G
Sbjct: 813 ERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGA 872
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 873 CSCGDYW 879
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 243/514 (47%), Gaps = 10/514 (1%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASLR-QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
MR G F ++ C A L Q+H+ ++GL + + ++ Y +G +
Sbjct: 94 MRARGVRCNEFALPIVLKCAPDAGLGVQVHAVAVSTGLSGD-IFVANALVAMYGGFGFVD 152
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
AR +F+ D++ + WN M+ A+ N C + +EL+ M SG+ N + F V+ A
Sbjct: 153 EARRVFDEAARDRN-AVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNA 211
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
C + + G+ VH ++RTG+ D + ALVDMY+K G VF ++ D+VSW
Sbjct: 212 CTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSW 271
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV--ASAVGQLGDVLKAQAVHGYA 237
I+ + AL L + + GL+ + T+ S+ A A G + +HG+
Sbjct: 272 NAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFM 331
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
I D I ++V MYA+ G ++ AR VF+ + ++DL+ WN++++G G E+L
Sbjct: 332 IKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESL 391
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
LF M+ N T ++ + L + + H D+ + N ++D Y
Sbjct: 392 SLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSY 451
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHIT 417
KC L A +F + H S+ N+ ++ +I HG A++ F +ML +G++PD
Sbjct: 452 WKCNCLRYANKVFEE-HSSD-NIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFV 509
Query: 418 FTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+S+L+AC+ ++G++ A + K +V +V + G + +A +P
Sbjct: 510 LSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP 569
Query: 478 LPPNDSVWGALL--LACRIHGEIAANYLFQLEPE 509
S W A++ LA HG+ A + ++ E
Sbjct: 570 DKGVVS-WSAMIGGLAQHGHGKRALDVFRRMVDE 602
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 222/446 (49%), Gaps = 13/446 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
IH+ L SGL++ ++ Y+ P +AR +F+ + S W++++ AY+
Sbjct: 25 HIHAHLLKSGLLHA---FRNHLLSFYSKCRLPGSARRVFDETPDPCHVS--WSSLVTAYS 79
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NN E L + MR G+ N + P VLK CA ++ + G VH + TG D +
Sbjct: 80 NNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL--GVQVHAVAVSTGLSGDIF 136
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSV-RDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V ALV MY G D+ +VFDE + R+ VSW M++A+ + ++ +A+ LF +
Sbjct: 137 VANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWS 196
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + V +A D+ + VH + + +D+ N++V MY++ G++ A
Sbjct: 197 GVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMA 256
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT--ALILVSACT 323
LVF + K D++SWN+ ++G + +G AL L +M++S PN T +++ A
Sbjct: 257 ALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGA 316
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
G+ LGR+ HG++I + D + A++DMYAK G LD A +F I +++ W
Sbjct: 317 GAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWI--PRKDLLLW 374
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N LI+G G ++L F +M +EG + T ++L + + I + + A K
Sbjct: 375 NALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEK 434
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEA 469
+ + ++D + CL A
Sbjct: 435 IGFLSDSHVVNGLIDSYWKCNCLRYA 460
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 198/392 (50%), Gaps = 19/392 (4%)
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
P + + A+ SL L G +H ++++G L + L+ Y+KC +VFDE
Sbjct: 9 PLLTRYAATQSLFL-GAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDETPD 65
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
VSW+ ++TAY P EAL F+ + G+ + + V G L Q V
Sbjct: 66 PCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG--LGVQ-V 122
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK-RDLISWNSMLTGYIQNGQ 292
H A+ D+ + N++VAMY G V++AR VFD + R+ +SWN M++ +++N +
Sbjct: 123 HAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDR 182
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL--GRKFHGYIINSNMKIDATLR 350
S+A+ LF EM S +PN +V+ACT GSR L GRK H ++ + D
Sbjct: 183 CSDAVELFGEMVWSGVRPNEFGFSCVVNACT--GSRDLEAGRKVHAMVVRTGYDKDVFTA 240
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
NA++DMY+K GD+ A +F + + +V SWN I+G +HGH + ALE QM G
Sbjct: 241 NALVDMYSKLGDIHMAALVFGKV--PKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 411 VKPDHITFTSILS--ACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
+ P+ T +SIL A + AG GR+ M K + +VDM + G L +
Sbjct: 299 LVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDD 358
Query: 469 AFDMIKQMPLPPNDSVWGALLLACR---IHGE 497
A + + +P + +W AL+ C HGE
Sbjct: 359 ARKVFEWIP-RKDLLLWNALISGCSHGGCHGE 389
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/658 (36%), Positives = 374/658 (56%), Gaps = 12/658 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R IH + GL + + + ++ Y+ G A +F ++ S WN+M+ Y
Sbjct: 418 RGIHGLVVKLGL-DSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS--WNSMMACY 474
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+G C++ L++ + + + G N TF L AC++ ++E K+VH II GF
Sbjct: 475 VQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL 534
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V ALV MY K G + KV M D V+W +I + + E+P EA+ ++ +++
Sbjct: 535 IVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREK 594
Query: 206 GLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G+ ++ +T+VSV A D+LK +H + + F D ++NS++ MYA+CG++
Sbjct: 595 GIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNS 654
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
+ +FD + + I+WN+M+ +G EAL +F EM+N + + ++A
Sbjct: 655 SNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATAN 714
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L + G++ HG +I + D + NA MDMY KCG++ M P R+ SWN
Sbjct: 715 LAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLP--QPINRSRLSWN 772
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
+LI+ + HG +KA E F +ML+ G KPDH+TF S+LSAC+H GL+DEG + MT+
Sbjct: 773 ILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 832
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI----- 498
V P ++H C++D+LGR+G L A IK+MP+PPND W +LL ACRIHG +
Sbjct: 833 FGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARK 892
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
A +L +L+P +VL SN+ A S KW +V LR++M + +KK A S ++ +
Sbjct: 893 TAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVH 952
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F ++ +P + K+ + K AGY+PD S ALHD+++E +E+ L HSE+LA+
Sbjct: 953 SFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLAL 1012
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
AFG++N + +++ KNLRVC DCHS ++F+S I RKI++RD RFHHF GG CSC
Sbjct: 1013 AFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 238/455 (52%), Gaps = 6/455 (1%)
Query: 36 GLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETL 95
G +N + +I Y+ +G AR +F+ + + S W+TM+ Y G E +
Sbjct: 123 GSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEAS--WSTMLSGYVRVGLYEEAV 180
Query: 96 ELYSTMRRSGISSNSYTFPFVLKACA-SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
L+ M G+ N + ++ AC+ S + EG VHG +++TG L D YV ALV
Sbjct: 181 GLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHF 240
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
Y G + K+F+EM ++VSWT ++ Y + P E L ++Q+ +QEG+ + T
Sbjct: 241 YGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTF 300
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
+V S+ G L D + V G+ I F + + + NS+++M++ +VE+A VFD M +
Sbjct: 301 ATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNE 360
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
D+ISWN+M++ Y +G E+L F M++ + N T L+S C+ + + + GR
Sbjct: 361 CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI 420
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
HG ++ + + + N ++ +Y++ G + AE +F + +ER++ SWN ++A Y G
Sbjct: 421 HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAM--TERDLISWNSMMACYVQDG 478
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
L+ +++L+ G +H+TF S L+ACS+ + E + A + +
Sbjct: 479 KCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGN 538
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+V M G+ G + EA +++ MP P+ W AL+
Sbjct: 539 ALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALI 572
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 240/451 (53%), Gaps = 15/451 (3%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN MI AYA++G C E+L + MR +NS T +L C+S + G+ +HG ++
Sbjct: 366 WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 425
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ G S+ + L+ +Y++ G+++D VF M+ RDL+SW M+ Y Q K + L
Sbjct: 426 KLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLK 485
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
+ + Q G + + VT S +A +++++ VH I F + L + N++V MY
Sbjct: 486 ILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYG 545
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+ G + +A+ V M + D ++WN+++ G+ +N + +EA+ + ++ N +T +
Sbjct: 546 KLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS 605
Query: 318 LVSACTYLGS-RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC+ + G H +I+ + + D ++N+++ MYAKCGDL+++ +F+ +
Sbjct: 606 VLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGL--G 663
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
++ +WN ++A HG G +AL+ F +M GV D +F+ L+A ++ +++EG++
Sbjct: 664 NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ 723
Query: 437 CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS--VWGALLLACRI 494
+ KL + ++ +DM G+ G E D++K +P P N S W L+ A
Sbjct: 724 LHGLVIKLGFESDLHVTNAAMDMYGKCG---EMHDVLKMLPQPINRSRLSWNILISAFAR 780
Query: 495 HG--EIAANYLFQL-----EPEHTGYFVLMS 518
HG + A ++ +P+H + L+S
Sbjct: 781 HGCFQKARETFHEMLKLGPKPDHVTFVSLLS 811
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 138/276 (50%), Gaps = 16/276 (5%)
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ +A+H + I + + N+++ MY++ GN+E AR VFD M R+ SW++ML+GY
Sbjct: 111 MAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGY 170
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG-SRQLGRKFHGYIINSNMKID 346
++ G EA+ LF +M +PN L++AC+ G G + HG+++ + + D
Sbjct: 171 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 230
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ A++ Y G + A+ +F ++ + NV SW L+ GY G+ + L + +M
Sbjct: 231 VYVGTALVHFYGSIGLVYNAQKLFEEM--PDHNVVSWTSLMVGYSDSGNPGEVLNVYQRM 288
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDE---GRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
+EGV + TF ++ S+C GL+++ G + + + + V ++ M
Sbjct: 289 RQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSF 345
Query: 464 GCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHG 496
+ EA FD + + + W A++ A HG
Sbjct: 346 SSVEEACYVFDHMNECDIIS----WNAMISAYAHHG 377
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
S+ G+ H + I ++ + N +++MY+K G+++ A +F+++ RN +SW+ +
Sbjct: 109 SQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMR--HRNEASWSTM 166
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG-LIDEGRKCFADMTKLS 445
++GY G +A+ F QM GV+P+ S+++ACS +G + DEG + + K
Sbjct: 167 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 226
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ +V +V G G +Y A + ++MP N W +L++
Sbjct: 227 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVG 271
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/635 (35%), Positives = 367/635 (57%), Gaps = 10/635 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y +G AR +F +H+ + ++ N M+ + G + L+L++ MRR+GI + +
Sbjct: 180 YCKHGLLAAARRVFLEMHDKDAVTY--NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHF 237
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TF +L A + +L G VH ++R+ + + +V +L+D Y+KC DD ++FDEM
Sbjct: 238 TFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEM 297
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
RD VS+ V+I AY + L LF++ Q+ G + ++ S G L DV +
Sbjct: 298 PERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGK 357
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+H + + + N+++ MY++CG ++ A+ F ++ ISW +++TGY+QNG
Sbjct: 358 QIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNG 417
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
Q EAL LF +M+ + +P+ T ++ A + L LGR+ H Y+I S K +
Sbjct: 418 QHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGS 477
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
++DMYAKCG LD A F+++ ERN SWN +I+ Y +G + A++ F ML G
Sbjct: 478 VLVDMYAKCGCLDEALRTFDEM--PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 535
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAF 470
PD +TF S+L+ACSH GL DE K F M + S+ P +HYAC++D LGR GC +
Sbjct: 536 NPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 595
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASN 525
M+ +MP + +W ++L +CRIHG +AA+ LF +EP +V++SNIYA +
Sbjct: 596 KMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAG 655
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
+W + +++ M+++G++K + +S +E + I F + D +P E+ +++ + E+
Sbjct: 656 QWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMD 715
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
GY PD++CALH V+ E + L YHSE+LA+AF +MN +++ KNL C DCH+
Sbjct: 716 KQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHA 775
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ IS I R IIVRD+ RFHHF+ G CSC DYW
Sbjct: 776 VIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 222/453 (49%), Gaps = 16/453 (3%)
Query: 48 IIIKYTTYGEPNTARSLF-NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI 106
I+ Y++ G+ A+ LF +S H + + W M+RA+A G + L L+ M G+
Sbjct: 80 ILSAYSSSGDLPAAQHLFLSSPHRNAT---TWTIMMRAHAAAGRTSDALSLFRAMLGEGV 136
Query: 107 SSNSYTFPFVLK--ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG 164
+ T VL C SL H I+ G + +V L+D Y K G
Sbjct: 137 IPDRVTVTTVLNLPGCTVPSL-------HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAA 189
Query: 165 CKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
+VF EM +D V++ M+ + +AL LF ++ G+ + T S+ + +
Sbjct: 190 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGM 249
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
+L VH + + + ++ + NS++ Y++C ++ R +FD M +RD +S+N ++
Sbjct: 250 AHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 309
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
Y N A+ L LF EMQ + ++S L +G++ H ++ +
Sbjct: 310 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 369
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ L NA++DMY+KCG LD A++ F++ SE++ SW LI GY +G +AL+ FS
Sbjct: 370 SEDLLGNALIDMYSKCGMLDAAKSNFSN--RSEKSAISWTALITGYVQNGQHEEALQLFS 427
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
M G++PD TF+SI+ A S +I GR+ + + + K V + +VDM + G
Sbjct: 428 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 487
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
CL EA +MP N W A++ A +GE
Sbjct: 488 CLDEALRTFDEMP-ERNSISWNAVISAYAHYGE 519
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 159/362 (43%), Gaps = 38/362 (10%)
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS----------------- 178
+++TGF +Y + G +FD+M +++ S
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 179 --------------WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
WT+M+ A+ A + +AL LF+ EG++ D VT+ +V + G
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG-- 151
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
++H +AI + + N+++ Y + G + AR VF M +D +++N+M+
Sbjct: 152 ---CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 208
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
G + G ++AL LF M+ + T +++ + LG + H ++ S
Sbjct: 209 MGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSV 268
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
++ + N+++D Y+KC LD +F+++ ER+ S+NV+IA Y + L F
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEM--PERDNVSYNVIIAAYAWNQCAATVLRLFR 326
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
+M + G + + ++LS + G++ A + L + E ++DM + G
Sbjct: 327 EMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG 386
Query: 465 CL 466
L
Sbjct: 387 ML 388
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 236/641 (36%), Positives = 368/641 (57%), Gaps = 38/641 (5%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G + ARS+F+ + S WN ++ AY N E L+ +
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVS--WNALLSAYVQNSKMEEACMLFKSRE--------- 215
Query: 112 TFPFVLKACASNSLILEGKVVHG-DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
+ V C + + K+V + + D ++ YA+ G+ D+ ++FDE
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA-----VGQLG 225
V+D+ +WT M++ Y Q EEA LF K + +S + + +L
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
DV+ + V + N+++ YA+CG + +A+ +FD M KRD +SW +M+
Sbjct: 336 DVMPCRNVSTW-------------NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY Q+G + EAL LF +M+ + N + +S C + + +LG++ HG ++ +
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ NA++ MY KCG ++ A ++F ++ + +++ SWN +IAGY HG G AL FF
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEM--AGKDIVSWNTMIAGYSRHGFGEVALRFFES 500
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M EG+KPD T ++LSACSH GL+D+GR+ F MT+ V P +HYACMVD+LGRAG
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSN 519
L +A +++K MP P+ ++WG LL A R+HG E AA+ +F +EPE++G +VL+SN
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 620
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
+YA+S +W +VGKLR M++KG+KK +S IE F D +P E++ +E
Sbjct: 621 LYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEE 680
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ + +K AGY+ S LHDVE+E++E M+ YHSE+LAVA+GIM ++ ++V KNLRV
Sbjct: 681 LDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRV 740
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+A ++++ I R II+RD NRFHHF+ G+CSC DYW
Sbjct: 741 CEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 210/459 (45%), Gaps = 48/459 (10%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN I +Y G C E L ++ M R S +S N ++ + L ++ D+
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 137 IRTGFLSDSYVQ----------------------AALVDMYAKCGQTDDGCKVFDEMSVR 174
+ + YV+ ++ YA+ G DD VFD M +
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+ VSW +++AY Q K EEA +LF+ + L+S + + G V K + V
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLG---------GFVKKKKIVE 237
Query: 235 GYAICNAF-LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
++ + D+ N+I+ YA+ G +++AR +FD +D+ +W +M++GYIQN
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMV 297
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EA LFD+M + N V+ +++ ++ ++ + N+ + N +
Sbjct: 298 EEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV----STWNTM 349
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+ YA+CG + A+N+F+ + +R+ SW +IAGY GH +AL F QM EG +
Sbjct: 350 ITGYAQCGKISEAKNLFDKM--PKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+ +F+S LS C+ ++ G++ + K + ++ M + G + EA D+
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 474 KQMPLPPNDSV-WGALLLACRIH--GEIAANYLFQLEPE 509
K+M D V W ++ H GE+A + ++ E
Sbjct: 468 KEM--AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 131/325 (40%), Gaps = 75/325 (23%)
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF- 334
D+ WN ++ Y++ G+ +EAL +F M + + V+ ++S G +L RK
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 335 ---------------HGYIINSNM-----------KIDATLRNAVMDMYAKCGDLDTAEN 368
GY+ N N+ + D N ++ YA+ G +D A +
Sbjct: 119 DEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 369 MFNDIHPSERNVS------------------------------SWNVLIAGYGMHGHGRK 398
+F D P + +VS SWN L+ G+ +
Sbjct: 179 VF-DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVE 237
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
A +FF M V+ D +++ +I++ + +G IDE R+ F + S +V + MV
Sbjct: 238 ARQFFDSM---NVR-DVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVS 289
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AANYLFQLEP-EHTGYFV 515
+ + EA ++ +MP N+ W A +LA + GE A LF + P + +
Sbjct: 290 GYIQNRMVEEARELFDKMP-ERNEVSWNA-MLAGYVQGERMEMAKELFDVMPCRNVSTWN 347
Query: 516 LMSNIYAASNKWREVGKLREDMKNK 540
M YA K E L + M +
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKR 372
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/674 (35%), Positives = 380/674 (56%), Gaps = 85/674 (12%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKY---TTYGEPNTARSLFNSIHNDK 72
L SC+ +A L+Q HS + GL +G +IK+ + G+ N A +F+ I +
Sbjct: 27 LDSCSTMAELKQYHSQIIRLGLSADNDAMGR--VIKFCAISKSGDLNYALEVFDKIPHPD 84
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+Y ++NT+ R Y + +YS M +S N +T+P +++AC + I EGK +
Sbjct: 85 AY--IYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQI 142
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H +++ GF + D S+ +L+ V + EQA +
Sbjct: 143 HAHVLKFGFGA-------------------------DGFSLNNLIHMYVNFQSLEQARR- 176
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+F Q ++S S+
Sbjct: 177 -----VFDNMPQRDVVS---------------------------------------WTSL 192
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ Y++ G V+KAR VF++M +R+ +SWN+M+ Y+Q+ + EA LFD M+ + +
Sbjct: 193 ITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDK 252
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
A ++SACT LG+ + G+ HGYI S +++D+ L V+DMY KCG L+ A +FN+
Sbjct: 253 FVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNE 312
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ ++ +SSWN +I G MHG G A+E F +M E V PD ITF ++LSAC+H+GL++
Sbjct: 313 L--PQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVE 370
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG+ F MT+ L +KP ++H+ CMVD+LGRAG L EA +I +MP+ P+ V GAL+ A
Sbjct: 371 EGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGA 430
Query: 492 CRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIHG E + +LEP ++G +VL++N+YA++ +W +V K+R+ M ++G+KK
Sbjct: 431 CRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAP 490
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
FS+IE + F R +P KE+Y K++ + I+ GY+PD LHD+++E++E
Sbjct: 491 GFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKE 550
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
+ L YHSEKLA+AFG++ P ++++KNLR+C DCH A + IS +Y R+II+RD NRF
Sbjct: 551 NPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRF 610
Query: 667 HHFEGGTCSCNDYW 680
HHF G CSC DYW
Sbjct: 611 HHFRMGGCSCKDYW 624
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/635 (35%), Positives = 367/635 (57%), Gaps = 10/635 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y +G AR +F +H+ + ++ N M+ + G + L+L++ MRR+GI + +
Sbjct: 180 YCKHGLLAAARRVFLEMHDKDAVTY--NAMMMGCSKEGLHTQALQLFAAMRRAGIPATHF 237
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TF +L A + +L G VH ++R+ + + +V +L+D Y+KC DD ++FDEM
Sbjct: 238 TFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEM 297
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
RD VS+ V+I AY + L LF++ Q+ G + ++ S G L DV +
Sbjct: 298 PERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGK 357
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+H + + + N+++ MY++CG ++ A+ F ++ ISW +++TGY+QNG
Sbjct: 358 QIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNG 417
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
Q EAL LF +M+ + +P+ T ++ A + L LGR+ H Y+I S K +
Sbjct: 418 QHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGS 477
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
++DMYAKCG LD A F+++ ERN SWN +I+ Y +G + A++ F ML G
Sbjct: 478 VLVDMYAKCGCLDEALRTFDEM--PERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 535
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAF 470
PD +TF S+L+ACSH GL DE K F M + S+ P +HYAC++D LGR GC +
Sbjct: 536 NPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 595
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASN 525
M+ +MP + +W ++L +CRIHG +AA+ LF +EP +V++SNIYA +
Sbjct: 596 KMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAG 655
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
+W + +++ M+++G++K + +S +E + I F + D +P E+ +++ + E+
Sbjct: 656 QWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMD 715
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
GY PD++CALH V+ E + L YHSE+LA+AF +MN +++ KNL C DCH+
Sbjct: 716 KQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHA 775
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ IS I R IIVRD+ RFHHF+ G CSC DYW
Sbjct: 776 VIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 222/453 (49%), Gaps = 16/453 (3%)
Query: 48 IIIKYTTYGEPNTARSLF-NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI 106
I+ Y++ G+ A+ LF +S H + + W M+RA+A G + L L+ M G+
Sbjct: 80 ILSAYSSSGDLPAAQHLFLSSPHRNAT---TWTIMMRAHAAAGRTSDALSLFRAMLGEGV 136
Query: 107 SSNSYTFPFVLK--ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG 164
+ T VL C SL H I+ G + +V L+D Y K G
Sbjct: 137 IPDRVTVTTVLNLPGCTVPSL-------HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAA 189
Query: 165 CKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
+VF EM +D V++ M+ + +AL LF ++ G+ + T S+ + +
Sbjct: 190 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGM 249
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
+L VH + + + ++ + NS++ Y++C ++ R +FD M +RD +S+N ++
Sbjct: 250 AHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 309
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
Y N A+ L LF EMQ + ++S L +G++ H ++ +
Sbjct: 310 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 369
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ L NA++DMY+KCG LD A++ F++ SE++ SW LI GY +G +AL+ FS
Sbjct: 370 SEDLLGNALIDMYSKCGMLDAAKSNFSN--RSEKSAISWTALITGYVQNGQHEEALQLFS 427
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
M G++PD TF+SI+ A S +I GR+ + + + K V + +VDM + G
Sbjct: 428 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 487
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
CL EA +MP N W A++ A +GE
Sbjct: 488 CLDEALRTFDEMP-ERNSISWNAVISAYAHYGE 519
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 159/362 (43%), Gaps = 38/362 (10%)
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS----------------- 178
+++TGF +Y + G +FD+M +++ S
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 179 --------------WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
WT+M+ A+ A + +AL LF+ EG++ D VT+ +V + G
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG-- 151
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
++H +AI + + N+++ Y + G + AR VF M +D +++N+M+
Sbjct: 152 ---CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 208
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
G + G ++AL LF M+ + T +++ + LG + H ++ S
Sbjct: 209 MGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSV 268
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
++ + N+++D Y+KC LD +F+++ ER+ S+NV+IA Y + L F
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEM--PERDNVSYNVIIAAYAWNQCAATVLRLFR 326
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
+M + G + + ++LS + G++ A + L + E ++DM + G
Sbjct: 327 EMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCG 386
Query: 465 CL 466
L
Sbjct: 387 ML 388
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/665 (36%), Positives = 390/665 (58%), Gaps = 14/665 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++H+ + +G I + + + ++ Y G + A +F + S WNT+I A
Sbjct: 402 REVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRIS--WNTIITAL 459
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NG+C + Y MR++ I +++ L +CA L+ G+ +H D ++ G D+
Sbjct: 460 DQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDT 519
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP-EEALILFQKTQQ 204
V ALV MY +CG+ + ++F+ MS D+VSW ++ ++ P E++ +F +
Sbjct: 520 SVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMK 579
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
GL+ + VT V+ +A+ L + + +H + + ED + N++++ YA+ G+V+
Sbjct: 580 SGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDS 639
Query: 265 ARLVFDMME-KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+F M +RD ISWNSM++GYI NG EA+ M +S+ + T I+++AC
Sbjct: 640 CERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACA 699
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ + + G + H + + S+++ D + +A++DMY+KCG +D A +F+ + S++N SW
Sbjct: 700 SVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSM--SQKNEFSW 757
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I+GY HG GRKALE F +M E G PDH+TF S+LSACSHAGL++ G F M
Sbjct: 758 NSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMED 817
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-------- 495
+ P ++HY+C++D+LGRAG L + + +K+MP+ PN +W +L+AC+
Sbjct: 818 YGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDL 877
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G A+ L +LEP++ +VL S +AA +W + K R MK +KK A S +
Sbjct: 878 GTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTD 937
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F DR +P KE+Y+K+ + +I+ AGY+P LHD+E+E++E +L YHSEK
Sbjct: 938 GVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEK 997
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVAF + + +++ KNLRVC DCH+AFR+IS I R+II+RD+ RFHHF+ G CS
Sbjct: 998 LAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCS 1057
Query: 676 CNDYW 680
C DYW
Sbjct: 1058 CGDYW 1062
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 228/471 (48%), Gaps = 29/471 (6%)
Query: 1 MRRLGPS---TEGFYDQLLKSC-----NFLASLRQIHSSLTTSGLINQALHLGAKI-IIK 51
M R GP T + +L++C + L Q+H ++ + + A I +
Sbjct: 157 MLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYG 216
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR--RSGIS-- 107
+ G P A+ +F++ + WN ++ YA G + T L+ M+ SGI
Sbjct: 217 SCSVGPPILAQRVFDTTPVRDLIT--WNALMSVYAKRGDAICTFTLFRAMQYDDSGIELR 274
Query: 108 SNSYTFPFVLKAC--ASNSL-ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG 164
+TF ++ A +S SL +L+ V ++++G SD YV +ALV +A+ G D+
Sbjct: 275 PTEHTFGSLITATYLSSCSLGLLDQLFVR--VLKSGCSSDLYVGSALVSAFARHGMLDEA 332
Query: 165 CKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
++ + R+ V+ +I + + E A +F + ++ T V + SA+ +
Sbjct: 333 KDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD-TYVVLLSAIAEF 391
Query: 225 GD----VLKAQAVHGYAI-CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
+ K + VH + + + + N +V MYA+CG ++KA VF +ME RD IS
Sbjct: 392 STAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRIS 451
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN+++T QNG A++ + M+ + P+ A+ +S+C LG G++ H +
Sbjct: 452 WNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAV 511
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG-MHGHGRK 398
+ +D ++ NA++ MY +CG + +FN + S +V SWN ++ +
Sbjct: 512 KWGLYLDTSVSNALVKMYGECGRMSECWEIFNSM--SAHDVVSWNSIMGVMASSQAPITE 569
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
+++ FS M++ G+ P+ +TF + L+A + +++ G++ + M K V +
Sbjct: 570 SVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTED 620
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 156/318 (49%), Gaps = 18/318 (5%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++++ G D ++ LV+ YAK + D +VFD M R+ VSWT +I+ + +
Sbjct: 87 LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146
Query: 192 PEEALILFQKTQQE--GLLSDSVTIVSVASAVGQLG-DVLK-AQAVHGYAICNAFLEDLC 247
PE+A LF+ +E G S T SV A G D L A VHG F +
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206
Query: 248 IQNSIVAMYARC--GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ N++++MY C G A+ VFD RDLI+WN++++ Y + G A LF MQ
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266
Query: 306 SDC----KPNPVTALILVSACTYLGSRQLG--RKFHGYIINSNMKIDATLRNAVMDMYAK 359
D +P T L++A TYL S LG + ++ S D + +A++ +A+
Sbjct: 267 DDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFAR 325
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITF 418
G LD A++++ + ERN + N LIAG HG A E F + V D T+
Sbjct: 326 HGMLDEAKDIYLGL--KERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD--TY 381
Query: 419 TSILSACSHAGLIDEGRK 436
+LSA + ++G +
Sbjct: 382 VVLLSAIAEFSTAEQGLR 399
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 148/327 (45%), Gaps = 30/327 (9%)
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+++H + DL + N +V YA+ ++ AR VFD M R+ +SW +++G++ +
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 291 GQASEALLLFDEM--QNSDCKPNPVTALILVSACTYLGSRQLG--RKFHGYIINSNMKID 346
G +A LF M + C+P T ++ AC G +LG + HG + + +
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 347 ATLRNAVMDMYAKC--GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
T+ NA++ MY C G A+ +F D P R++ +WN L++ Y G F
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVF-DTTPV-RDLITWNALMSVYAKRGDAICTFTLFR 262
Query: 405 QML--EEGV--KPDHITFTSI-----LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
M + G+ +P TF S+ LS+CS GL+D+ F + K ++ +
Sbjct: 263 AMQYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLDQ---LFVRVLKSGCSSDLYVGSA 318
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI---HGEIAANYLFQLEPEHT- 511
+V R G L EA D+ + L ++V L+A + HGE AA
Sbjct: 319 LVSAFARHGMLDEAKDIY--LGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAV 376
Query: 512 ---GYFVLMSNIYAASNKWREVGKLRE 535
Y VL+S I S + + K RE
Sbjct: 377 NVDTYVVLLSAIAEFSTAEQGLRKGRE 403
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/630 (37%), Positives = 353/630 (56%), Gaps = 29/630 (4%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGI--SSNSYTFPFVLKACASNSLILEGKVVHGD 135
W IRA A GH + + L+ MR S SS + P LK+CA+ L G +H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 136 IIRTGFLSDSYVQAALVDMYAK--CGQTDDGC-----------------KVFDEMSVRDL 176
IR+G +D + AL+++Y K C D KVFDEM RD+
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW ++ + + EAL +K +EG DS T+ +V + DV + VHG+
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
A N F D+ + +S++ MYA C + + VFD + RD I WNS+L G QNG EA
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L +F M + +P PVT L+ C L S + G++ H Y+I + + + ++++DM
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y KCG++ A +F+ + S +V SW +I GY +HG R+AL F +M KP+HI
Sbjct: 316 YCKCGEISIAHCIFDKM--SSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHI 373
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
TF ++L+ACSHAGL+D+G K F M+ + P ++H+A + D LGRAG L EA++ I +
Sbjct: 374 TFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISK 433
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
M + P SVW LL ACR+H E A + +LEP G V++SN+Y+AS +W E
Sbjct: 434 MQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEA 493
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
LRE M+ KG+KK A S IE + F DR +P++ + + + + ++ G++
Sbjct: 494 AHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHV 553
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P+ D+E+E + ++L HSEKLA+ FGI++ ++V KNLRVC DCH+ +FI
Sbjct: 554 PNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFI 613
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S + R+I+VRDANRFHHF+ G CSC D+W
Sbjct: 614 SKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 152/350 (43%), Gaps = 65/350 (18%)
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
LWN+++ A NG E L ++ M ++G+ TF ++ C + + + GK +H +
Sbjct: 238 LWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV 297
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
I GF + ++ ++L+DMY KCG+ +FD+MS D+VSWT MI Y EAL
Sbjct: 298 ICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREAL 357
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDV------LKAQAVHGYAICNAFLEDLCIQN 250
+LF++ + + +T ++V +A G V K+ + H Y I + +
Sbjct: 358 VLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNH-YGIVPTLEHFAALAD 416
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLIS-WNSMLTG----------------------- 286
++ R G +++A M+ + S W+++L
Sbjct: 417 TL----GRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPR 472
Query: 287 -----------YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
Y +G+ +EA L + M+ K +P AC+++ ++ K H
Sbjct: 473 SIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDP--------ACSWI---EVKSKLH 521
Query: 336 GYIINS------NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
++ + + IDA NA + A+ G + E++F DI ++
Sbjct: 522 VFVAHDRSHPWYDRIIDAL--NAFSEQMAREGHVPNTEDVFQDIEEEHKS 569
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/640 (36%), Positives = 371/640 (57%), Gaps = 28/640 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
I+ Y G + AR +F+ + S WN ++ AY N E L+ +
Sbjct: 158 ILSGYAQNGCVDDARRVFDRMPEKNDVS--WNALLSAYVQNSKLEEACVLFGSRE----- 210
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHG-DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
+ V C + + K+V + + D ++ YA+ G+ D+ +
Sbjct: 211 ----NWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQ 266
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FDE V D+ +WT M++ Y Q EEA LF + + + V+ ++ + Q
Sbjct: 267 LFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGER 322
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
V A+ + C ++ N+++ YA+CG + +A+ +FD M KRD +SW +M+ G
Sbjct: 323 VEMAKELFDVMPC----RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 378
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y Q+G + EAL LF M+ + N + +S C + + +LG++ HG ++ +
Sbjct: 379 YSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 438
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA++ MY KCG ++ A ++F ++ + +++ SWN +IAGY HG G +AL FF M
Sbjct: 439 CFVGNALLLMYCKCGSIEEANDLFKEM--AGKDIVSWNTMIAGYSRHGFGEEALRFFESM 496
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGC 465
EG+KPD T ++LSACSH GL+D+GR+ F MT+ V+P +HYACMVD+LGRAG
Sbjct: 497 KREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGL 556
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNI 520
L EA +++K MP P+ ++WG LL A R+HG E AA+ +F +EPE++G +VL+SN+
Sbjct: 557 LEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNL 616
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
YA+S +W +VGKLR M++KG+KK +S IE F D +P E++ +E +
Sbjct: 617 YASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDL 676
Query: 581 AVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVC 640
+ +K AGY+ S LHDVE+E++E M+ YHSE+LAVA+GIM ++ ++V KNLRVC
Sbjct: 677 DLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVC 736
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH+A ++++ + R II+RD NRFHHF+ G+CSC DYW
Sbjct: 737 EDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 197/469 (42%), Gaps = 96/469 (20%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN I +Y G C E L ++ M R SS SY
Sbjct: 62 WNVAISSYMRTGRCSEALRVFKRMPR--WSSVSYN------------------------- 94
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
A++ Y + G+ + +FDEM RDLVSW VMI Y + +A
Sbjct: 95 ------------AMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARE 142
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA------------QAVHGYAICNAFLED 245
LF++ + + S + TI+S + G + D + A+ + N+ LE+
Sbjct: 143 LFERMPERDVCSWN-TILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEE 201
Query: 246 LCI------------QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
C+ N ++ + + + +AR FD M+ RD++SWN+++TGY QNG+
Sbjct: 202 ACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEI 261
Query: 294 SEALLLFDEMQNSDCKPNPVTALI-------LVSACTYLGSRQLGRK-------FHGYII 339
EA LFDE D TA++ +V L R R GY+
Sbjct: 262 DEARQLFDESPVHDV--FTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQ 319
Query: 340 NSNMKI-----------DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+++ + + N ++ YA+CG + A+N+F+ + +R+ SW +IA
Sbjct: 320 GERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM--PKRDPVSWAAMIA 377
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
GY GH +AL F M EG + + +F+S LS C+ ++ G++ + K +
Sbjct: 378 GYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 437
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
++ M + G + EA D+ K+M D V W ++ HG
Sbjct: 438 GCFVGNALLLMYCKCGSIEEANDLFKEM--AGKDIVSWNTMIAGYSRHG 484
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 183/416 (43%), Gaps = 76/416 (18%)
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
D+ W V I++Y + + EAL +F++ + SV+ ++ S + G+ A+ +
Sbjct: 58 DIKEWNVAISSYMRTGRCSEALRVFKRMPR----WSSVSYNAMISGYLRNGEFELARMLF 113
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
DL N ++ Y R N+ KAR +F+ M +RD+ SWN++L+GY QNG
Sbjct: 114 D----EMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVD 169
Query: 295 EALLLFDEM-QNSDCKPNPVTALI-----LVSACTYLGSRQ----------LG------- 331
+A +FD M + +D N + + L AC GSR+ LG
Sbjct: 170 DARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKK 229
Query: 332 ----RKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENMFND--IHPSERNVSSWN 384
R+F +MK+ D N ++ YA+ G++D A +F++ +H +V +W
Sbjct: 230 IVEARQFF-----DSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVH----DVFTWT 280
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
+++GY + +A E F +M E + +++ ++L+ ++ ++ F M
Sbjct: 281 AMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKELFDVMPCR 336
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIAANYL 503
+V + M+ + G + EA ++ +M P D V W A++ + + +Y
Sbjct: 337 NVST----WNTMITGYAQCGKISEAKNLFDKM--PKRDPVSWAAMIAG---YSQSGHSY- 386
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
E FVLM RE G+L + L A +E GK + G
Sbjct: 387 -----EALRLFVLME---------REGGRLNRSSFSSALSTCADVVALELGKQLHG 428
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/676 (36%), Positives = 380/676 (56%), Gaps = 51/676 (7%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L+ C+ L +++ IH + +G +++ A ++ Y + A LF + +
Sbjct: 218 ILRGCSALGLIQKGEMIHGYVVKNGF-ESNVYVVAGLVDMYAKCRHISEAEILFKGLAFN 276
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
K LW M+ YA NG + +E + M G+ SN +TFP +L AC+S S G+
Sbjct: 277 KGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQ 336
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VHG I+R GF ++YVQ+ALVDMYAKCG +V + M D+VSW MI +
Sbjct: 337 VHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGF 396
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASA--VGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
EEA++LF+K + D T SV + VG+ + ++VH I F +
Sbjct: 397 EEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGR----IDGKSVHCLVIKTGFENYKLVS 452
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N++V MYA+ ++ A VF+ M ++D+ISW S++TGY QNG E+L F +M+ S
Sbjct: 453 NALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVS 512
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P+ ++SAC L + G++ H I ++ ++ N+++ MYAKCG LD A+ +
Sbjct: 513 PDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAI 572
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F +H R+V +W LI GY +G GR +L++F QM
Sbjct: 573 FVSMHV--RDVITWTALIVGYARNGKGRDSLKYFQQM----------------------- 607
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+K + ++P +HYACM+D+ GR G L EA +++ QM + P+ +VW ALL
Sbjct: 608 -----KKIYG------IEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALL 656
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+H GE AA LF+LEP + +V++SN+Y A+ KW + K+R MK+KG+ K
Sbjct: 657 AACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITK 716
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE + F + DR +P E+Y K++ + IK GY+PD++ +LHD++ E
Sbjct: 717 EPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREG 776
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L YHSEKLAVAFG++ P A +++ KNLRVC DCHSA ++IS ++ R II+RD+N
Sbjct: 777 KEAGLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSN 836
Query: 665 RFHHFEGGTCSCNDYW 680
FHHF+ G CSC DYW
Sbjct: 837 CFHHFKEGECSCEDYW 852
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 156/528 (29%), Positives = 260/528 (49%), Gaps = 53/528 (10%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYS---------------- 99
G+ + AR LF+ + Y+ WNTM+ YAN G VE EL++
Sbjct: 129 GQIDDARELFDKMLQRDEYT--WNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISG 186
Query: 100 ---------------TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
MR G + YT +L+ C++ LI +G+++HG +++ GF S+
Sbjct: 187 YCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESN 246
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVR--DLVSWTVMITAYEQAEKPEEALILFQKT 202
YV A LVDMYAKC + +F ++ + V WT M+T Y Q +A+ F+
Sbjct: 247 VYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYM 306
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
EG+ S+ T S+ +A + + VHG + N F + +Q+++V MYA+CG++
Sbjct: 307 HTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDL 366
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
A+ V + ME D++SWNSM+ G +++G EA+LLF +M + K + T +++ C
Sbjct: 367 GSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCC 426
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ R G+ H +I + + + NA++DMYAK DL+ A +F + E++V S
Sbjct: 427 --IVGRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMF--EKDVIS 482
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W L+ GY +G ++L+ F M GV PD SILSAC+ L++ G++ +D
Sbjct: 483 WTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFI 542
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL--ACRIHGEIAA 500
KL ++ + +V M + GCL +A + M + + W AL++ A G +
Sbjct: 543 KLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHV-RDVITWTALIVGYARNGKGRDSL 601
Query: 501 NYLFQLE--------PEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
Y Q++ PEH + M +++ K E ++ M K
Sbjct: 602 KYFQQMKKIYGIEPGPEH---YACMIDLFGRLGKLDEAKEILNQMDVK 646
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 152/327 (46%), Gaps = 38/327 (11%)
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
++S + ++ + D Q V + I +++ + + N ++ ++ G ++ AR +FD M
Sbjct: 83 VLLSASPSLNEDSDDTGVQQVVMHNIADSY-QSIFHSNQLLNGLSKSGQIDDARELFDKM 141
Query: 273 EKRDLISWNSML-------------------------------TGYIQNGQASEALLLFD 301
+RD +WN+M+ +GY + G+ +EA LF
Sbjct: 142 LQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFK 201
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
M+ KP+ T ++ C+ LG Q G HGY++ + + + + ++DMYAKC
Sbjct: 202 RMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCR 261
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+ AE +F + ++ N W ++ GY +G KA+EFF M EGV+ + TF SI
Sbjct: 262 HISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSI 321
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
L+ACS G + + + + +VDM + G L A +++ M +
Sbjct: 322 LTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENM---ED 378
Query: 482 DSV--WGALLLACRIHG-EIAANYLFQ 505
D V W ++++ C HG E A LF+
Sbjct: 379 DDVVSWNSMIVGCVRHGFEEEAILLFK 405
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 23/220 (10%)
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
GY I++ + + L +A + D + + ++I S +++ N L+ G G
Sbjct: 74 GYYISTALSV---LLSASPSLNEDSDDTGVQQVVMHNIADSYQSIFHSNQLLNGLSKSGQ 130
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
A E F +ML+ D T+ +++S ++ G + E R+ F + S
Sbjct: 131 IDDARELFDKMLQR----DEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSS---- 182
Query: 456 MVDMLGRAGCLYEAFDMIKQMPL---PPNDSVWGALLLACRIHGEIAANYLFQLEPEHTG 512
++ R G EAFD+ K+M L P+ G++L C G I + G
Sbjct: 183 LISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIH------G 236
Query: 513 YFV---LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
Y V SN+Y + K R + + L K AF+
Sbjct: 237 YVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFN 276
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/678 (35%), Positives = 386/678 (56%), Gaps = 38/678 (5%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LLK+C +S R++H +G + A ++ Y G +AR +F+ +
Sbjct: 94 LLKACAQASSGDLGRELHGFAQKNGFASDVFVCNA-LMNMYEKCGCLVSARLVFDQMPER 152
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W TM+ Y + E L L M+ G+ + ++ + + G+
Sbjct: 153 DVVS--WTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRA 210
Query: 132 VHGDIIRTGFLSDSYVQ----AALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
VHG I+R + D ++ AL+DMY K G ++FD +S R +VSWTVMI
Sbjct: 211 VHGYIVRN--VGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCI 268
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
++ + +E F + +E L + +T++S+ + G +G + + H Y + N F L
Sbjct: 269 RSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLA 328
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ +++ MY +CG V AR +F+ ++K+D+ W+ +++ Y + LF EM N+D
Sbjct: 329 LVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNND 388
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
KPN VT + L+S C G+ LG+ H YI +++D L A+++MYAKCGD+ A
Sbjct: 389 VKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIAR 448
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
++FN+ +R++ WN ++AG+ MHG G++ALE FS+M GV+P+ ITF SI ACSH
Sbjct: 449 SLFNE--AMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSH 506
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
+GL++ HY C+VD+LGRAG L EA ++I+ MP+ PN +WGA
Sbjct: 507 SGLME-------------------HYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGA 547
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL AC++H GE+AA + +L+P++ GY VL SNIYA++ +W +V +RE M + G+
Sbjct: 548 LLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGM 607
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KK S IE + F + D+ +VY+ V M ++++ +GY P+ + L ++++
Sbjct: 608 KKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDE 667
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
E++E L+YHSEKLA AFG+++ P +++ KNLR+C+DCH+A + +S IY R IIVRD
Sbjct: 668 EEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRD 727
Query: 663 ANRFHHFEGGTCSCNDYW 680
NRFHHF G CSC YW
Sbjct: 728 RNRFHHFSEGYCSCMGYW 745
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 227/422 (53%), Gaps = 6/422 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISS-NSYTFPFVLKACASNSLILEGKVVHGDI 136
+N +I +Y NN + Y MR + ++ +++ P +LKACA S G+ +HG
Sbjct: 55 YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFA 114
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ GF SD +V AL++MY KCG VFD+M RD+VSWT M+ Y +++ EAL
Sbjct: 115 QKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEAL 174
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQNSIVA 254
L ++ Q G+ V ++S+ + G L D+ +AVHGY + N E ++ + +++
Sbjct: 175 RLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALID 234
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY + G + A+ +FD + KR ++SW M+ G I++ + E F+ M PN +T
Sbjct: 235 MYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEIT 294
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
L L++ C ++G+ LG+ FH Y++ + + L A++DMY KCG + A +FN +
Sbjct: 295 LLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV- 353
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
+++V W+VLI+ Y + F +ML VKP+++T S+LS C+ AG +D G
Sbjct: 354 -KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLG 412
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ A + + ++ +V +++M + G + A + + + + +W ++ +
Sbjct: 413 KWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNE-AMQRDIRMWNTMMAGFSM 471
Query: 495 HG 496
HG
Sbjct: 472 HG 473
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/570 (38%), Positives = 355/570 (62%), Gaps = 7/570 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+LK C + EGK+VH ++ + F D +Q +L+ MYA+CG + ++FDEM RD
Sbjct: 80 LLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPHRD 139
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWT MIT Y Q ++ +AL+LF + +G + T+ S+ G + + +H
Sbjct: 140 MVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHA 199
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
++ + +S+V MYARCG + +A LVFD + ++ +SWN+++ GY + G+ E
Sbjct: 200 CCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEE 259
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL LF MQ +P T L+S+C+ +G + G+ H +++ S+ K+ + N ++
Sbjct: 260 ALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLH 319
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAK G + AE +F+ + + +V S N ++ GY HG G++A + F +M+ G++P+
Sbjct: 320 MYAKSGSIRDAEKVFDKL--VKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPND 377
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
ITF S+L+ACSHA L+DEG+ F M K +++P+V HYA +VD+LGRAG L +A I++
Sbjct: 378 ITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEE 437
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ P ++WGALL A ++H G AA +F+L+P + G L++NIYA++ +W +V
Sbjct: 438 MPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDV 497
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
K+R+ MK+ G+KK A S +E + F D +P ++++K E + +IK GY+
Sbjct: 498 AKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYV 557
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
PD S L V+ +++E L YHSEKLA++F ++N P + +++ KN+RVC DCHSA +++
Sbjct: 558 PDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYV 617
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S + +R+IIVRD NRFHHF G CSC DYW
Sbjct: 618 SLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 194/386 (50%), Gaps = 7/386 (1%)
Query: 11 FYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
Y+ LLK C L L++ +H + S L + ++ Y G AR LF+
Sbjct: 76 LYNTLLKRCTQLGKLKEGKLVHFHVLNSNF-KHDLVIQNSLLFMYARCGSLEGARRLFDE 134
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ + S W +MI YA N + L L+ M G N +T ++K C +
Sbjct: 135 MPHRDMVS--WTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYN 192
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +H + G S+ +V ++LVDMYA+CG + VFD++ ++ VSW +I Y
Sbjct: 193 CGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYA 252
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ + EEAL LF + Q+EG T ++ S+ +G + + + +H + + ++
Sbjct: 253 RKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGY 312
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N+++ MYA+ G++ A VFD + K D++S NSML GY Q+G EA FDEM
Sbjct: 313 VGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFG 372
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+PN +T L +++AC++ G+ + G + N++ + ++D+ + G LD A+
Sbjct: 373 IEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAK 432
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMH 393
+ ++ P E V+ W L+ MH
Sbjct: 433 SFIEEM-PIEPTVAIWGALLGASKMH 457
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 3/202 (1%)
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
L + D + +P+ L+ CT LG + G+ H +++NSN K D ++N+++
Sbjct: 58 GLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLF 117
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYA+CG L+ A +F+++ R++ SW +I GY + AL F +ML +G +P+
Sbjct: 118 MYARCGSLEGARRLFDEM--PHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNE 175
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
T +S++ C + + GR+ A K V + +VDM R G L EA + +
Sbjct: 176 FTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDK 235
Query: 476 MPLPPNDSVWGALLLACRIHGE 497
+ N+ W AL+ GE
Sbjct: 236 LGC-KNEVSWNALIAGYARKGE 256
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/616 (39%), Positives = 354/616 (57%), Gaps = 46/616 (7%)
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
SS + F F+ + ++ I G+ H I+ G ++++ A +V MYA G D
Sbjct: 78 SSYAPIFQFLTR----HNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVV 133
Query: 167 VFDEMSVRDLVSWTVMITAYEQ---AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
VFD + + + +I AY + L + + GLL D+ T+ V +
Sbjct: 134 VFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCAD 193
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD------------- 270
L V + VHG + D + S++ MY +CG + AR +FD
Sbjct: 194 LSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNAL 253
Query: 271 ------------------MMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKP 310
ME R+++SW +M++GY QNG A +AL LFDEM S+ KP
Sbjct: 254 IAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP 313
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N VT + ++ AC + + GR+ H + + ++++++ A+ MYAKC L A F
Sbjct: 314 NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCF 373
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ I + +N+ +WN +I Y HG G +A+ F ML GV+PD +TF +LS CSH+GL
Sbjct: 374 DMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGL 433
Query: 431 IDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
ID G F DM + SV+P V+HYAC+VD+LGRAG L EA ++I QMP+ SVWGALL
Sbjct: 434 IDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALL 493
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR H E+AA LF LEP+++G +VL+SN+YA + W EV KLR +K +G+KK
Sbjct: 494 AACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKK 553
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE F AD+ +P KE+YK +E++ +IKMAGY+PD S LHD+ +E+
Sbjct: 554 SPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEE 613
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E+ L HSEKLA+AFG++N P V++VTKNLR+C DCH+A +FIS IY R+IIVRD N
Sbjct: 614 KEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLN 673
Query: 665 RFHHFEGGTCSCNDYW 680
RFH F+ G+CSC DYW
Sbjct: 674 RFHCFKDGSCSCGDYW 689
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 134/428 (31%), Positives = 217/428 (50%), Gaps = 45/428 (10%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
PS+ Q L NF+ +Q H+ + GL A L AK++ Y + G+ ++A +F
Sbjct: 77 PSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAF-LAAKMVAMYASSGDLDSAVVVF 135
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVET---LELYSTMRRSGISSNSYTFPFVLKACAS 122
+ I D S L+N++IRAY +G LE Y+ M G+ +++T PFVLK+CA
Sbjct: 136 DRI--DNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCAD 193
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL------ 176
S + G+ VHG +R G D YV A+L+DMY KCG D K+FD+M VRD+
Sbjct: 194 LSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNAL 253
Query: 177 -------------------------VSWTVMITAYEQAEKPEEALILFQKTQQEG--LLS 209
VSWT MI+ Y Q E+AL LF + Q+G +
Sbjct: 254 IAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP 313
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
+ VTIVSV A Q + + + +H +A + +Q ++ MYA+C ++ +AR F
Sbjct: 314 NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCF 373
Query: 270 DMMEK--RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
DM+ + ++LI+WN+M+T Y +G EA+ +F+ M + +P+ VT + L+S C++ G
Sbjct: 374 DMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGL 433
Query: 328 RQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G H + + ++ + + V+D+ + G L A+ + + + P + S W
Sbjct: 434 IDAGLN-HFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQM-PMQAGPSVWGA 491
Query: 386 LIAGYGMH 393
L+A H
Sbjct: 492 LLAACRSH 499
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P+P + + T +LG++ H I+ ++ +A L ++ MYA GDLD+A +
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 370 FNDIHPSERNVSS--WNVLIAGYGMHG---HGRKALEFFSQMLEEGVKPDHITFTSILSA 424
F+ I N SS +N +I Y HG LE +++M G+ D+ T +L +
Sbjct: 135 FDRID----NPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKS 190
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
C+ + GR ++ ++ + A ++DM + G + +A + +M + + +
Sbjct: 191 CADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKM-IVRDMAS 249
Query: 485 WGALLLACRIHGEIA-ANYLFQ 505
W AL+ GEI A LF+
Sbjct: 250 WNALIAGYMKEGEIGVAEDLFE 271
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/609 (38%), Positives = 364/609 (59%), Gaps = 9/609 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN++I +NG E +EL+ M G +S T VL ACA + G+VVHG +
Sbjct: 479 WNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSV 538
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+TG + ++ + AL+DMY+ C ++F M+ +++VSWT MIT+Y +A ++
Sbjct: 539 KTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAG 598
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
L Q+ +G+ D + SV + + ++VHGYAI N + L + N+++ MY
Sbjct: 599 LLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYV 658
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
C N+E+ARLVFD + +D+ISWN+++ GY +N A+E+ LF +M KPN VT
Sbjct: 659 NCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTC 717
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ A + S + GR+ H Y + D+ NA++DMY KCG L A +F+ + ++
Sbjct: 718 ILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRL--TK 775
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
+N+ SW ++IAGYGMHG G+ A+ F QM GV+PD +F++IL AC H+GL EG K
Sbjct: 776 KNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKF 835
Query: 438 FADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH- 495
F M K ++P++KHY C+VD+L G L EAF+ I+ MP+ P+ S+W +LL CRIH
Sbjct: 836 FNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHR 895
Query: 496 ----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
E A+ +F+LEPE+TGY+VL++NIYA + +W V KL+ + +GL++ S I
Sbjct: 896 DVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWI 955
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E + F +R +P W + + ++ +A ++ G+ P +L D + L
Sbjct: 956 EVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCG 1015
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HS KLAV FG+++L ++VTKN +VC+ CH A +FIS + R+II+RD++RFHHFEG
Sbjct: 1016 HSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEG 1075
Query: 672 GTCSCNDYW 680
G CSC ++
Sbjct: 1076 GRCSCRGHF 1084
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 226/458 (49%), Gaps = 16/458 (3%)
Query: 14 QLLKSCNFLASLRQIHSSLT--TSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
QL L + R+ H+ + T G+I L G ++++ Y G+ AR +F+ +
Sbjct: 102 QLCGEERSLEAARRAHALVRAGTGGIIGSVL--GKRLVLAYLKCGDLGGARMVFDEMPPR 159
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ +W +++ AYA G E + L+ M+ G+S +++ VLK AS I EG+V
Sbjct: 160 VADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEV 219
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG + + G V AL+ +Y++CG +D +VFD M RD +SW I+ Y
Sbjct: 220 IHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGW 279
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL----- 246
+ A+ LF K EG SVT++SV A +LG L + VHGY++ + L DL
Sbjct: 280 HDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQS 339
Query: 247 ----CIQNSIVAMYARCGNVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFD 301
+ + +V MY +CG++ AR VFD M K ++ WN ++ GY + + E+LLLF+
Sbjct: 340 GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFE 399
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
+M P+ L+ T L + G HGY++ + NA++ YAK
Sbjct: 400 QMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSN 459
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+D A +F D P + + SWN +I+G +G +A+E F +M +G + D T S+
Sbjct: 460 MIDNAVLVF-DRMPHQDTI-SWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSV 517
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
L AC+ + GR K + E ++DM
Sbjct: 518 LPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDM 555
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/680 (36%), Positives = 398/680 (58%), Gaps = 20/680 (2%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C+ L LR +H +GL + L + ++ Y A ++F +
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGL-HADLFVSTALVDVYAKCASFRHAATVFRRMPAR 193
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ WN M+ YA +G +T+ M+ + N+ T +L A + + +G+
Sbjct: 194 DVVA--WNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRA 250
Query: 132 VHGDIIRTGFLSDS----YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
VH +R L D V AL+DMYAKCG +VF+ M+VR+ V+W+ ++ +
Sbjct: 251 VHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFV 310
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVT-IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ EA LF+ +GL S T + S A L D+ + +H + DL
Sbjct: 311 LCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDL 370
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
NS+++MYA+ G +++A +FD M +D +S++++++GY+QNG+A EA +F +MQ
Sbjct: 371 TAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQAC 430
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ +P+ T + L+ AC++L + Q G+ HG +I + + ++ NA++DMYAKCG +D +
Sbjct: 431 NVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLS 490
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F D+ P+ R++ SWN +IAGYG+HG G++A F M + +PD +TF ++SACS
Sbjct: 491 RQIF-DVMPA-RDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACS 548
Query: 427 HAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL+ EG++ F M K + P ++HY MVD+L R G L EA+ I+ MPL + VW
Sbjct: 549 HSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVW 608
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GALL ACR+H G+ ++ + QL PE TG FVL+SNI++A+ ++ E ++R K +
Sbjct: 609 GALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQ 668
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G KK S IE + F DR + E+Y++++++ V+I GY D S L DV
Sbjct: 669 GFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDV 728
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E+E++E L YHSEKLA+AFG++ L+ + + VTKNLRVC DCH+ ++++ + +R IIV
Sbjct: 729 EEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIV 788
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RDANRFHHF+ G CSC D+W
Sbjct: 789 RDANRFHHFKNGQCSCGDFW 808
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 233/478 (48%), Gaps = 24/478 (5%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF 115
G+ + AR LF+ I + + N +IRAY+ G + S RR N+YTFPF
Sbjct: 77 GDLSLARHLFDQIPAPGIHDY--NALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPF 134
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
VLKAC++ + + VH R G +D +V ALVD+YAKC VF M RD
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+V+W M+ Y K + + Q + ++ T+V++ + Q G + + +AVH
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHA 253
Query: 236 YAICNAFLED----LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
Y++ L D + + +++ MYA+CG++ A VF+ M R+ ++W++++ G++ G
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313
Query: 292 QASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
+ EA LF +M C +P + + AC L LG++ H + S + D T
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAG 373
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N+++ MYAK G +D A +F+ + ++ S++ L++GY +G +A F +M
Sbjct: 374 NSLLSMYAKAGLIDQATTLFDQM--VVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACN 431
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
V+PD T S++ ACSH + G+ + + E ++DM + G
Sbjct: 432 VQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCG----RI 487
Query: 471 DMIKQM--PLPPNDSV-WGALLLACRIHG---EIAANYL----FQLEPEHTGYFVLMS 518
D+ +Q+ +P D V W ++ IHG E A +L EP+ + L+S
Sbjct: 488 DLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLIS 545
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/675 (35%), Positives = 383/675 (56%), Gaps = 16/675 (2%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L +C L ++++ +H + G+ + +G ++ Y + AR +F+ +
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVI-IGNGLLSMYFKFERLREARRVFSKMAVK 286
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S + WNTMI YA G +++L+ M G + + ++AC + + GK
Sbjct: 287 DSVT--WNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKF 343
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH +I +GF D+ L+DMYAKCG +VFD +D V+W +I Y Q+
Sbjct: 344 VHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGY 403
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+E L F+ + E DSVT V + S QL D+ + + +H I F +L I NS
Sbjct: 404 YKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNS 462
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ +YA+CG ++ VF M D+ISWN+++ + + + +EM+ P+
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPD 522
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T L ++ C+ L R+ G++ HGYI S + + + NA+++MY+KCG L+ +F
Sbjct: 523 EATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFK 582
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ E++V +W LI+ +GM+G G+KAL+ F M GV PD + F + + ACSH+G++
Sbjct: 583 --YMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMV 640
Query: 432 DEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
EG + F M T +++P ++HYAC+VD+L R+G L +A + I MP+ P+ S+WGALL
Sbjct: 641 KEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700
Query: 491 ACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACR G + + + +L + TGY+VL+SNIYA KW +V +R MK KGLKK
Sbjct: 701 ACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKE 760
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE K + F T D+ + +V +E + + GY+ DL ALHDVE++D+
Sbjct: 761 PGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDK 820
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
ML HSE+LA+AFG++N P + + V KNLRVC DCH+ ++I+ I +R+I+VRDANR
Sbjct: 821 RDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANR 880
Query: 666 FHHFEGGTCSCNDYW 680
FH F+ G CSC D+W
Sbjct: 881 FHRFKDGACSCGDHW 895
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 262/494 (53%), Gaps = 13/494 (2%)
Query: 6 PSTEGFYDQLLK---SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
PS E LLK S LR +HS + TSGL + ++ K+I KY +P ++
Sbjct: 16 PSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGL-SLSVIFSGKLISKYAQVKDPISSV 74
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
S+F SI + +LWN++IRA +NG + L Y+ MR + +++TFP V+ +CA
Sbjct: 75 SVFRSISPTNNV-YLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCAR 133
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
+ G +VH + GF SD Y+ AL+DMY++ D+ VF+EMS RD VSW +
Sbjct: 134 ILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSL 193
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I+ Y E+AL ++ K + G++ D T+ SV A G L V + AVHG
Sbjct: 194 ISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGI 253
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
D+ I N +++MY + + +AR VF M +D ++WN+M+ GY Q G+ ++ LF +
Sbjct: 254 AGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMD 313
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M + P+ ++ + AC G Q+G+ H Y+I S + D N ++DMYAKCGD
Sbjct: 314 MIDGFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGD 372
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
L A+ +F+ ++ +WN LI GY G+ ++ LE F +M++ KPD +TF +L
Sbjct: 373 LLAAQEVFDTTKC--KDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLL 429
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP-LPPN 481
S S I++GR D+ K + E+ ++D+ + G E D++K + +
Sbjct: 430 SIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCG---EMDDLLKVFSYMSAH 486
Query: 482 DSVWGALLLACRIH 495
D + ++A +H
Sbjct: 487 DIISWNTVIASSVH 500
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/665 (36%), Positives = 381/665 (57%), Gaps = 17/665 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
LA+L ++H+ L +++ + H+ + + Y G + A S + + S WN +
Sbjct: 24 LATLTRLHALL----VVSSSQHILSSLAAAYARAGALDAAESTLAASPSSPSSIAAWNGL 79
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
+ A++ G L ++ + S NS TF L ACA + + V G+
Sbjct: 80 LSAHSRAGAPGAALRVFRALPSSA-RPNSTTFTLTLTACARLGDLDAAESVRVRAFAAGY 138
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D +V +AL+ +Y++CG ++ +VFD M +D V+W+ M+ + A +P EAL ++ +
Sbjct: 139 GHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSR 198
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
++ G+ D V +V V A G+ +VHG + + D+ S+V+MYA+ G+
Sbjct: 199 MREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGH 258
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
++ A VF MM R+ ++W+++++G+ QNG+A EAL LF E+Q +P + + A
Sbjct: 259 LDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLA 318
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C +G +LG+ HG+I+ ++ L AV+DMY+KCG L++A +FN + S R++
Sbjct: 319 CASVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLESARKLFNKL--SSRDLV 375
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
WN +IA G HG G AL F ++ E G+KPDH TF S+LSA SH+GL++EG+ F M
Sbjct: 376 LWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRM 435
Query: 442 TK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
K ++P KHY C+VD+L R+G + EA DM+ M P ++W LL C +
Sbjct: 436 IKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLEL 495
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
GE A + +L PE G L+SN+YAA+ KW +V ++R+ MK+ G KK +S+IE
Sbjct: 496 GETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKG 555
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
F D+ +P +E+ K V + E++ GY+P HD+ D + +L+YHSE+
Sbjct: 556 TRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDL---DEDQLLSYHSER 612
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AFG++N +P + + KNLRVC DCH A ++IS I R+I+VRDA RFHHF+ G CS
Sbjct: 613 LAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACS 672
Query: 676 CNDYW 680
C DYW
Sbjct: 673 CGDYW 677
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/565 (40%), Positives = 352/565 (62%), Gaps = 16/565 (2%)
Query: 129 GKVVHGDIIRTG-FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +H IR+G F SD + +AL+ MY C + D K FDE+ + V T M + Y
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 188 QAEKPEEALILFQKTQQEGLLS--DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+ +L LF+K G + D + SA ++ D ++H + D
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 246 LCIQNSIVAMYARCG--NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ N+++ YA+ G ++ AR VFD MEK D++SWNSM+ Y QNG +++AL L+ +M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTMEK-DVVSWNSMIALYAQNGMSADALGLYRKM 286
Query: 304 QN--SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
N K N VT ++ AC + G+ Q G+ H ++ ++ + + +V+DMY+KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
++ A F I E+N+ SW+ +I GYGMHGHG++AL+ F++M G P++ITF S+
Sbjct: 347 RVEMARKAFQKI--KEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISV 404
Query: 422 LSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L+ACSHAGL+D+GR + M K ++P V+HY CMVD+LGRAGCL EA+ +IK+M + P
Sbjct: 405 LAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 464
Query: 481 NDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ ++WGALL ACRIH EI+A LF+L+ + GY+VL+SNIYA + W++V ++R
Sbjct: 465 DAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRV 524
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
+K +G++KP +S +E F+ D+ +P KE+Y + + +++ AGY+P+
Sbjct: 525 LVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGS 584
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
LHD+++E++ L+ HSEKLA+AF +MN P +V+ V KNLRVC DCH+A + I+ I +
Sbjct: 585 VLHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQ 644
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R+IIVRD RFHHF+ G+CSC DYW
Sbjct: 645 REIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 186/377 (49%), Gaps = 15/377 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H SGL + ++ Y P AR F+ I + + M Y
Sbjct: 109 RQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPN--PVIITAMASGY 166
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV---VHGDIIRTGFL 142
N +L L+ + SG S+ + L A ++++ I + + +H +++TG
Sbjct: 167 VRNNLVYPSLALFRKLIASG-SATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLD 225
Query: 143 SDSYVQAALVDMYAKCGQTDDGC--KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
D+ V ++D YAK G+ D G KVFD M +D+VSW MI Y Q +AL L++
Sbjct: 226 GDAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYR 284
Query: 201 K--TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
K + ++VT+ ++ A G + + +H + E++ + S+V MY++
Sbjct: 285 KMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSK 344
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG VE AR F +++++++SW++M+TGY +G EAL +F+EM S PN +T + +
Sbjct: 345 CGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISV 404
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPS 376
++AC++ G GR ++ + I+ + + ++D+ + G LD A + ++
Sbjct: 405 LAACSHAGLLDKGRYWYN-AMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMK-V 462
Query: 377 ERNVSSWNVLIAGYGMH 393
+ + + W L++ +H
Sbjct: 463 KPDAAIWGALLSACRIH 479
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 255/731 (34%), Positives = 391/731 (53%), Gaps = 54/731 (7%)
Query: 2 RRLGPSTEGFYDQLLK--------------SCNFLAS----LRQIHSSLTTSGLINQALH 43
RR P+ + D LL+ +C+ LA R+ H+ +G ++
Sbjct: 141 RRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDER 200
Query: 44 LGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYS---FLWNTMIRAYANNGHCVETLELYS 99
++ Y G + A+ LF S+ S WNTM+ +G C E +E+
Sbjct: 201 FAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIY 260
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR-TGFLSDSYVQAALVDMYAKC 158
M G+ + TF L AC+ ++ G+ +H +++ + ++S+V +ALVDMYA
Sbjct: 261 DMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASH 320
Query: 159 GQTDDGCKVFDEMSV--RDLVSWTVMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIV 215
+ +VFD + R L W M+ Y QA EEAL LF + + E G++ TI
Sbjct: 321 ERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIA 380
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
V A + +AVHGY + ++ +QN+++ +YAR G++E AR +F +E R
Sbjct: 381 GVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPR 440
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNS------------------DCKPNPVTALI 317
D++SWN+++TG + G +A L EMQ PN VT +
Sbjct: 441 DVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMT 500
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L+ C L + G++ HGY + + D + +A++DMYAKCG L + +F+ + +
Sbjct: 501 LLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRL--PK 558
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQM-LEEGVKPDHITFTSILSACSHAGLIDEGRK 436
RNV +WNVLI YGMHG G +A+ F +M + KP+ +TF + L+ACSH+G++D G +
Sbjct: 559 RNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGME 618
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM-PLPPNDSVWGALLLACRI 494
F M + V+P +AC VD+LGRAG L EA+ +I M P S W + L ACR+
Sbjct: 619 LFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRL 678
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H GEIAA LFQLEP+ ++VL+ NIY+A+ W + ++R M+ +G+ K S
Sbjct: 679 HRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCS 738
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE I F + +P V+ ++++ ++ GY PD S LHD+E+ ++ +L
Sbjct: 739 WIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAIL 798
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
YHSEKLA+AFG++ P A ++V KNLRVCNDCH A +FIS + R+I++RD RFHHF
Sbjct: 799 RYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHF 858
Query: 670 EGGTCSCNDYW 680
G CSC DYW
Sbjct: 859 VDGACSCGDYW 869
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 204/421 (48%), Gaps = 19/421 (4%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS--DSYVQAALVDMYAKCGQTDDGCK 166
+ + P K+ A+ ++ + +HG +R L V AL+ YA+CG
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+F+ M RD V++ +I A + AL + EG S T+VSV A L +
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177
Query: 227 VLK-AQAVHGYAICNAFL--EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRD-----LI 278
L+ + H +A+ N FL ++ N++++MYAR G V+ A+++F ++ D ++
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+WN+M++ +Q+G+ EA+ + +M +P+ +T + AC+ L LGR+ H Y+
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297
Query: 339 I-NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ +S++ ++ + +A++DMYA + A +F+ + R + WN ++ GY G
Sbjct: 298 LKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDE 357
Query: 398 KALEFFSQM-LEEGVKPDHITFTSILSACSHAGLI--DEGRKCFADMTKLSVKPEVKHYA 454
+ALE F++M E GV P T +L AC+ + E + ++ P V++
Sbjct: 358 EALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQN-- 415
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIAANYLFQLEPEHTGY 513
++D+ R G + A + + P D V W L+ C + G I + E + G
Sbjct: 416 ALMDLYARLGDMEAARWIFAA--IEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGR 473
Query: 514 F 514
F
Sbjct: 474 F 474
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/623 (37%), Positives = 372/623 (59%), Gaps = 20/623 (3%)
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ N S WN +R A E++ LY +M RSG S ++++FPF+LK+CAS SL +
Sbjct: 8 VRNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPV 67
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE--MSVRDLVSWTVMITA 185
G+ +H +IR G ++ +V AL+ MY KCG +D KVF+E S + V + +I+
Sbjct: 68 SGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISG 127
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y K +A +F++ ++ G+ DSVTI+ + + +++HG + +
Sbjct: 128 YTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSE 187
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ + NS + MY +CG+VE R +FD M + LI+WN++++GY QNG A + L LF++M++
Sbjct: 188 VAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKS 247
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
S P+P T + ++S+C +LG++++G++ + + + L NA++ MYA+CG+L
Sbjct: 248 SGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAK 307
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F DI P +++ SW +I YGMHG G L F M++ G++PD F +LSAC
Sbjct: 308 ARAVF-DIMPV-KSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSAC 365
Query: 426 SHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SH+GL D+G + F M + ++P +HY+C+VD+LGRAG L EA + I MP+ P+ +V
Sbjct: 366 SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAV 425
Query: 485 WGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
WGALL AC+IH E+A + + EP + GY+VLMSNIY+ S + ++R M+
Sbjct: 426 WGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRE 485
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI-KMAGYMPDLSCAL- 597
+ +K +S +E+ + F DR + +EV++ ++ + + ++AG ++ C
Sbjct: 486 RAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG---NMDCDRG 542
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
+V REH SE+LA+AFGI+N P + V KNLRVC DCH + +S I R+
Sbjct: 543 EEVSSTTREH-----SERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRR 597
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
+VRDA+RFH+F+ G CSC DYW
Sbjct: 598 FVVRDASRFHYFKDGVCSCKDYW 620
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 212/428 (49%), Gaps = 9/428 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G S + F + +LKSC L+ S +Q+H + G + L A +I Y G
Sbjct: 41 MLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTA-LISMYCKCG 99
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
AR +F + +N +I Y N + ++ M+ +G+S +S T +
Sbjct: 100 LVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGL 159
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ C + G+ +HG+ ++ G S+ V + + MY KCG + G ++FDEM V+ L
Sbjct: 160 VPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGL 219
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
++W +I+ Y Q + L LF++ + G+ D T+VSV S+ LG Q V
Sbjct: 220 ITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGEL 279
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
N F ++ + N++++MYARCGN+ KAR VFD+M + L+SW +M+ Y +G
Sbjct: 280 VEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETG 339
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMD 355
L LFD+M +P+ ++++SAC++ G G + F ++ + ++D
Sbjct: 340 LTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVD 399
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+ + G LD A F D P E + + W L+ +H + A F++++E +P +
Sbjct: 400 LLGRAGRLDEAME-FIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPMN 456
Query: 416 ITFTSILS 423
I + ++S
Sbjct: 457 IGYYVLMS 464
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/780 (31%), Positives = 407/780 (52%), Gaps = 109/780 (13%)
Query: 6 PSTEGFYDQLLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P++ F+ +L++ + + R +H + GL + ++L ++ Y G A
Sbjct: 7 PTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGL-HLGVYLMNNLMTFYAKTGSLRFAH 65
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL------------------------- 97
+F+ + ++S WNT+I YA G+ + L
Sbjct: 66 HVFDEMPLKSTFS--WNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123
Query: 98 ------YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAAL 151
++ M + + +T VL +CA+N + G+ +H +++ G S V +L
Sbjct: 124 DNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSL 183
Query: 152 VDMYAKCGQTDDGCKVFDEMSV-------------------------------RDLVSWT 180
++MYAKCG VFD M+V RD+VSW
Sbjct: 184 LNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWN 243
Query: 181 VMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
MI+ Y Q EAL++F K E L D+ T+ S+ SA L + + +H Y +
Sbjct: 244 SMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILR 303
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLV------------------------------- 268
+ N++++MYA+ G VE ARL+
Sbjct: 304 AETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAR 363
Query: 269 --FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
F+ + RD+++W +M+ GY+QNG ++AL LF M N +PN T ++S + L
Sbjct: 364 EIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLT 423
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ G++ H I + ++ NA++ MYAK G+++ A+ +F D+ ++ + SW +
Sbjct: 424 ILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSM 482
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-S 445
I HG G++A+ F +ML G+KPDHIT+ +LSAC+H GL+++GRK + MT++
Sbjct: 483 IMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHE 542
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAA 500
++P + HYACM+D+ GRAG L EA+ I+ MP+ P++ WG+LL +C+IH ++AA
Sbjct: 543 IEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAA 602
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
L ++P ++G ++ ++N+Y+A KW + R+ MK++G++K S I ++ F
Sbjct: 603 ERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAF 662
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D ++P E+YK + + EIK G++PD LHD+E+E +E +L YHSEKLA+AF
Sbjct: 663 GVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAF 722
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
G++N +++ KNLRVCNDCHSA +FIS + R+IIVRDA RFHHF+ G+CSC DYW
Sbjct: 723 GLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/662 (36%), Positives = 383/662 (57%), Gaps = 12/662 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++IH+S+ S + L++ +I YT G+ A + ++N + WN++I+ Y
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT--WNSLIKGY 361
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
N E LE +S M +G S+ + ++ A S +L G +H +I+ G+ S+
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V L+DMY+KC T + F M +DL+SWT +I Y Q + EAL LF+ ++
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ D + + S+ A L +L + +H + + L D IQN +V +Y +C N+ A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYA 540
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ ++ +D++SW SM++ NG SEA+ LF M + + V L ++SA L
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ GR+ H Y++ ++ ++ AV+DMYA CGDL +A+ +F+ I + + +
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE--RKGLLQYTS 658
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KL 444
+I YGMHG G+ A+E F +M E V PDHI+F ++L ACSHAGL+DEGR M +
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
++P +HY C+VDMLGRA C+ EAF+ +K M P VW ALL ACR H GEIA
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A L +LEP++ G VL+SN++A +W +V K+R MK G++K S IE +
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHK 838
Query: 560 FHTADRVNPYWKEVYKKVESMAVEI-KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D+ +P KE+Y+K+ + ++ + GY+ D LH+V++ ++ ML+ HSE++A+
Sbjct: 839 FTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAI 898
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
A+G++ A +++TKNLRVC DCH+ + +S ++RR I++RDANRFHHFE G CSC D
Sbjct: 899 AYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGD 958
Query: 679 YW 680
W
Sbjct: 959 SW 960
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 203/403 (50%), Gaps = 6/403 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+HS + + + L K++ Y G + A +F+ + D++ +F WNTMI AY
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM-PDRT-AFAWNTMIGAY 157
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+NG L LY MR G+ +FP +LKACA I G +H +++ G+ S
Sbjct: 158 VSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTG 217
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
++ ALV MYAK ++FD + D V W ++++Y + K E L LF++
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 277
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI-CNAFLEDLCIQNSIVAMYARCGNVE 263
G +S TIVS +A + +H + + +L + N+++AMY RCG +
Sbjct: 278 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+A + M D+++WNS++ GY+QN EAL F +M + K + V+ +++A
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 397
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + G + H Y+I + + N ++DMY+KC F +H ++++ SW
Sbjct: 398 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH--DKDLISW 455
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+IAGY + +ALE F + ++ ++ D + SIL A S
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 176/335 (52%), Gaps = 10/335 (2%)
Query: 97 LYSTMRRSGISSNSY---TFPFVLKACASNSLILEGKVVHGDIIRT--GFLSDSYVQAAL 151
L +R +S N+ F +VL+ C + +G+ +H I +T F D ++ L
Sbjct: 64 LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKL 122
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
V MY KCG DD KVFDEM R +W MI AY +P AL L+ + EG+
Sbjct: 123 VFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGL 182
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD- 270
+ ++ A +L D+ +H + + I N++V+MYA+ ++ AR +FD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
EK D + WNS+L+ Y +G++ E L LF EM + PN T + ++AC +L
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 331 GRKFHGYIINSNM-KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G++ H ++ S+ + + NA++ MY +CG + AE + ++ + +V +WN LI G
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA--DVVTWNSLIKG 360
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
Y + ++ALEFFS M+ G K D ++ TSI++A
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 166/315 (52%), Gaps = 5/315 (1%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
N LA + ++H+ + G + L +G +I Y+ F +H+ S W
Sbjct: 401 NLLAGM-ELHAYVIKHGW-DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS--WT 456
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
T+I YA N VE LEL+ + + + + +L+A + +L K +H I+R
Sbjct: 457 TVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK 516
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
G L D+ +Q LVD+Y KC +VF+ + +D+VSWT MI++ EA+ LF
Sbjct: 517 GLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELF 575
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
++ + GL +DSV ++ + SA L + K + +H Y + F + I ++V MYA C
Sbjct: 576 RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACC 635
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G+++ A+ VFD +E++ L+ + SM+ Y +G A+ LFD+M++ + P+ ++ L L+
Sbjct: 636 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695
Query: 320 SACTYLGSRQLGRKF 334
AC++ G GR F
Sbjct: 696 YACSHAGLLDEGRGF 710
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/740 (35%), Positives = 400/740 (54%), Gaps = 96/740 (12%)
Query: 34 TSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN----------------DK--SYS 75
T + QA L A++ P +AR L NS+ N D+ +
Sbjct: 8 TPRTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMPPST 67
Query: 76 FLWNTMIRAYANNGHCV-ETLELYSTMRRSGISSNSYTFPFVLKACA----SNSLILEGK 130
FL++T +RA + G L+ MRR+G+ + +TF F+ K + +SL+L
Sbjct: 68 FLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLL-CT 126
Query: 131 VVHGDIIRTGFLSDS-YVQAALVDMYAKCGQTDDGCKVFDEM------------------ 171
++H +RT S + +V +L+ MY + G D + FDE+
Sbjct: 127 MLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKM 186
Query: 172 -------------SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
VRD++SWT +I AY +A + EA+ F+ G+ D VT+++V
Sbjct: 187 GMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVL 246
Query: 219 SAVGQLGDVLKAQAVH--------------------GYAICNAFLEDLCI---------- 248
SA +L D+ +++H YA C F +
Sbjct: 247 SACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRP 306
Query: 249 --QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
N+I+ Y + G+V+ AR +FD ME RD+I++NSM+TGYI +GQ EALLLF M+
Sbjct: 307 QSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRH 366
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
D + + T + L++AC LG+ Q GR H I ++ D L A++DMY KCG +D A
Sbjct: 367 DLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEA 426
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F + +R+V +W +IAG +G G+ ALE F QM +G +P+ +++ ++L+ACS
Sbjct: 427 TIVFQRM--GKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACS 484
Query: 427 HAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+ L++EGR F +M L ++ P+++HY CM+D+LGR+G L EA D++K MP+ PN +W
Sbjct: 485 HSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIW 544
Query: 486 GALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
++L ACR+H I AA +L +LEP+ G +V + NIY S +W K+R M+ +
Sbjct: 545 ASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEER 604
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
+KK A +S I + F +D+ +P E+ +E ++ +K GY P S DV
Sbjct: 605 QVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDV 664
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
++E++E L HSEKLA+AFG++NL P V + KNLRVC DCHSA + IS ++ R+IIV
Sbjct: 665 DEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIV 724
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD +RFHHF GTCSCND+W
Sbjct: 725 RDRSRFHHFREGTCSCNDFW 744
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/666 (37%), Positives = 366/666 (54%), Gaps = 35/666 (5%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
++ Y G + A+ LF S WNTMI G C E +++ M G+
Sbjct: 198 LLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVR 257
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCK 166
+ TF L AC+ L+ G+ VH +++ L+ +S+V +ALVDMYA Q +
Sbjct: 258 PDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARR 317
Query: 167 VFDEMSV--RDLVSWTVMITAYEQ-AEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVG 222
VFD + R L W MI Y Q EEA+ LF + + E G T+ V A
Sbjct: 318 VFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACA 377
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
+ +AVHGY + + +QN+++ MYAR G +++A +F M++ RD++SWN+
Sbjct: 378 RSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNT 437
Query: 283 MLTGYIQNGQASEALLLFDEMQ--------------------NSDCKPNPVTALILVSAC 322
++TG I G SEA L EMQ C PN +T + L+ C
Sbjct: 438 LITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGC 497
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
L + G++ HGY + ++ D + +A++DMYAKCG L A +F+ + RNV +
Sbjct: 498 AVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRL--PRRNVIT 555
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKCFADM 441
WNVLI YGMHG G +AL F +M+ G P+ +TF + L+ACSH+GL+D G + F M
Sbjct: 556 WNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGM 615
Query: 442 TK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM-PLPPNDSVWGALLLACRIH---- 495
+ +P +AC+VD+LGRAG L EA+ +I M P S W +L ACR+H
Sbjct: 616 KRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVK 675
Query: 496 -GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
G IAA LF+LEP+ ++VL+ NIY+A+ W ++R M+ +G+ K S IE
Sbjct: 676 LGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELD 735
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
I F + +P +V+ ++++ ++ GY+PD SC LHDV++ ++ ML YHSE
Sbjct: 736 GAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSE 795
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+AFG++ P A ++V KNLRVCNDCH A +FIS + R+I++RD RFHHF GTC
Sbjct: 796 KLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTC 855
Query: 675 SCNDYW 680
SC DYW
Sbjct: 856 SCGDYW 861
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 233/480 (48%), Gaps = 35/480 (7%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M LG +G + L +C+ L L R++H+ + + + + ++ Y +
Sbjct: 251 MVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNE 310
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHC-VETLELYSTMR-RSGISSNSYTFP 114
+ + AR +F+ + +WN MI YA +G E +EL+S M +G + + T
Sbjct: 311 QVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMA 370
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
VL ACA + + + VHG +++ S+ +VQ AL+DMYA+ G+ D+ +F + +R
Sbjct: 371 GVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLR 430
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQ-----------QEG---------LLSDSVTI 214
D+VSW +IT EA L ++ Q EG + +++T+
Sbjct: 431 DIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITL 490
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
+++ L + + +HGYA+ +A DL + +++V MYA+CG + AR VFD + +
Sbjct: 491 MTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPR 550
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRK 333
R++I+WN ++ Y +G EAL LFD M N + PN VT + ++AC++ G G +
Sbjct: 551 RNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLE 610
Query: 334 -FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
F G + + L V+D+ + G LD A + + + P E VS+W+ ++ +
Sbjct: 611 LFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRL 670
Query: 393 HGH---GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
H + GR A E + LE ++ +I SA AGL + + M + V E
Sbjct: 671 HRNVKLGRIAAERLFE-LEPDEASHYVLLCNIYSA---AGLWENSTEVRGMMRQRGVAKE 726
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 201/423 (47%), Gaps = 41/423 (9%)
Query: 109 NSYTFPFVLKACA--SNSLILEGKVVHGDIIRTGFLS---DSYVQAALVDMYAKCGQTDD 163
+S+T VL AC+ ++ G+ H ++ GFL + + AL+ MYA+ G DD
Sbjct: 151 SSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDD 210
Query: 164 GCKVF--DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
++F V DLV+W MI+ Q + EEA+ + G+ D VT S A
Sbjct: 211 AQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPAC 270
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLC----IQNSIVAMYARCGNVEKARLVFDMMEK--R 275
+L + + VH + + + +DL + +++V MYA V AR VFDM+ + R
Sbjct: 271 SRLELLGVGREVHAFVLKD---DDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGR 327
Query: 276 DLISWNSMLTGYIQN-GQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRK 333
L WN+M+ GY Q+ G EA+ LF M+ + C P+ T ++ AC
Sbjct: 328 QLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEA 387
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
HGY++ +M + ++NA+MDMYA+ G +D A +F I R++ SWN LI G +
Sbjct: 388 VHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMI--DLRDIVSWNTLITGCIVQ 445
Query: 394 GHGRKALEFFSQM-----------LEEG---------VKPDHITFTSILSACSHAGLIDE 433
G +A + +M + EG P++IT ++L C+
Sbjct: 446 GLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPAR 505
Query: 434 GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
G++ + +++ ++ + +VDM + GCL A + ++P N W L++A
Sbjct: 506 GKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPR-RNVITWNVLIMAYG 564
Query: 494 IHG 496
+HG
Sbjct: 565 MHG 567
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 10/243 (4%)
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQNSIVAMYARCGNVEKARL 267
D + + L D +A+HG ++ A L + N+++ YARCG+++ A
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 268 VFDMMEK--RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+F RD +S+NS+++ + AL +M +D + + T + ++ AC++L
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDML-ADHEVSSFTLVSVLLACSHL 165
Query: 326 GSR--QLGRKFHGYIINSNMKIDATLR---NAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
+ +LGR+ H + + R NA++ MYA+ G +D A+ +F ++
Sbjct: 166 ADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDL 225
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
+WN +I+ G +A++ M+ GV+PD +TF S L ACS L+ GR+ A
Sbjct: 226 VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAF 285
Query: 441 MTK 443
+ K
Sbjct: 286 VLK 288
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/673 (36%), Positives = 382/673 (56%), Gaps = 17/673 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L++C + +L R+IH + G + + A +I Y G+ NTAR +F+ + N
Sbjct: 213 VLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNA-LITMYVKCGDVNTARLVFDKMPNR 271
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y NG C+E L L+ M + + + T V+ AC G+
Sbjct: 272 DRIS--WNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQ 329
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG ++RT F D + +L+ MY+ G ++ VF RDLVSWT MI+ YE
Sbjct: 330 IHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLM 389
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P++AL ++ + EG++ D +TI V SA L ++ +H A + + NS
Sbjct: 390 PQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANS 449
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MYA+C ++KA +F +++++SW S++ G N + EAL F EM KPN
Sbjct: 450 LIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPN 508
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++SAC +G+ G++ H + + + + D + NA++DMY +CG ++ A F
Sbjct: 509 SVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFF 568
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ + V+SWN+L+ GY G G A E F +M+E V P+ +TF SIL ACS +G++
Sbjct: 569 SV---DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMV 625
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
EG + F M K S+ P +KHYAC+VD+LGR+G L EA++ I++MP+ P+ +VWGALL
Sbjct: 626 AEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLN 685
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
+CRIH GE+AA +FQ + GY++L+SN+YA + KW +V ++R+ M+ GL
Sbjct: 686 SCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVD 745
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S +E + F ++D +P KE+ +E ++K AG S + D+ + +
Sbjct: 746 PGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPESSHM-DIMEASK 804
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ HSE+LA+ FG++N P + VTKNL +C CH+ +FIS RR+I VRDA +
Sbjct: 805 ADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREVRREISVRDAEQ 864
Query: 666 FHHFEGGTCSCND 678
FHHF+GG CSC D
Sbjct: 865 FHHFKGGICSCTD 877
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/462 (30%), Positives = 237/462 (51%), Gaps = 9/462 (1%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P + Y L++ C + + ++ ++S ++ S + + +L LG ++ + +G A
Sbjct: 103 PVEDDAYVALIRLCEWKRARKEGSRVYSYVSIS-MSHLSLQLGNALLSMFVRFGNLVDAW 161
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F + +K F WN ++ YA G E L+LY M G+ + YTFP VL+ C
Sbjct: 162 YVFGRM--EKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGG 219
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
++ G+ +H +IR GF SD V AL+ MY KCG + VFD+M RD +SW M
Sbjct: 220 MPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAM 279
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I+ Y + E L LF + + D +T+ SV +A LGD + +HGY + F
Sbjct: 280 ISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEF 339
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
D I NS++ MY+ G +E+A VF E RDL+SW +M++GY +AL +
Sbjct: 340 GRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKM 399
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M+ P+ +T I++SAC+ L + +G H + + + N+++DMYAKC
Sbjct: 400 MEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKC 459
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
+D A +F+ E+N+ SW +I G ++ +AL FF +M+ +KP+ +T +L
Sbjct: 460 IDKALEIFHST--LEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVL 516
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
SAC+ G + G++ A + V + ++DM R G
Sbjct: 517 SACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCG 558
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G A+ D M + L+ C + +R+ G + + Y+ S + L
Sbjct: 85 GNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
NA++ M+ + G+L A +F + +RN+ SWNVL+ GY G +AL+ + +ML G
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRM--EKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
VKPD TF +L C + GR+ + + + +V ++ M + G + A
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262
Query: 471 DMIKQMP 477
+ +MP
Sbjct: 263 LVFDKMP 269
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/665 (36%), Positives = 379/665 (56%), Gaps = 17/665 (2%)
Query: 25 LRQIHSSLTTSGLINQALH---LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L+Q+H SL I+ LH +++K T + L S H FL+NT+
Sbjct: 29 LKQVHVSL-----IHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFS-HTQFPNIFLYNTL 82
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I + NN ETL+L+ ++R+ G++ + +TFP VLKAC S G +H +++ GF
Sbjct: 83 INGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGF 142
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D +L+ +Y+ G+ +D KVF+E+ R +V+WT + + Y A K EA+ LF+K
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKK 202
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G+ DS IV V SA +GD+ + + + ++ ++ ++V +YA+CG
Sbjct: 203 MVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+EKAR VFD M ++D+++W++M+ GY N E + F +M + KP+ + + +S+
Sbjct: 263 MEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSS 322
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C LG+ LG I + + NA++DMYAKCG + +F ++ E+++
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM--KEKDIV 380
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
N I+G +GH + + F Q + G+ PD TF +L C HAGLI +G + F +
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 442 TKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI-----H 495
+ + ++K V+HY CMVD+ GRAG L +A+ +I MP+ PN VWGALL CR+
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
E L LEP + G +V +SNIY+ S +W E ++R+ M KG+KK +S IE
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEG 560
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D+ +P ++Y K+E + E+++ G++P DVEDE++E +L +HSEK
Sbjct: 561 TVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEK 620
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVAFG+++ V++V KNLRVC DCH + IS I RR+I+VRD NRFH F G+CS
Sbjct: 621 LAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCS 680
Query: 676 CNDYW 680
CNDYW
Sbjct: 681 CNDYW 685
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/544 (41%), Positives = 331/544 (60%), Gaps = 40/544 (7%)
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
++ SW +I ++ EAL F ++ L + T + L D+ + H
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
A+ F DL + +++V MY++CG + AR +FD + R+++SW SM+TGY+QN A
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 159
Query: 295 EALLLFDEMQNSDC--------------------------------KPNPVTALILVSAC 322
AL +FD M D N VT ++ AC
Sbjct: 160 RALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLAC 219
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ GS++LG+ H +I ++ + + +++DMY KCG ++ A F+ + E+NV S
Sbjct: 220 AHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR--EKNVKS 277
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W+ ++AGYGMHGH ++ALE F +M GVKP++ITF S+L+ACSHAGL++EG F M+
Sbjct: 278 WSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMS 337
Query: 443 -KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
+ V+P V+HY CMVD+LGRAG L EAFD+IK M L P+ VWGALL ACR+H G
Sbjct: 338 HEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLG 397
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
EI+A LF+L+P++ GY+VL+SNIYA + +W +V ++R MKN GL KP FS+++
Sbjct: 398 EISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGR 457
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F DR +P +++Y+ +E ++++++ GY+PD++ LHDV E++E +L HSEKL
Sbjct: 458 VHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKL 517
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
AVAFGIMN P + + KNLRVC DCH+A +FIS I R+I+VRD+ RFHHF G CSC
Sbjct: 518 AVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSC 577
Query: 677 NDYW 680
DYW
Sbjct: 578 GDYW 581
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 196/417 (47%), Gaps = 73/417 (17%)
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
PN +LFN + DK+ F WN++I A +G VE L +S+MR+ + N TFP +
Sbjct: 26 PNLT-TLFNK-YVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAI 83
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
K+C++ + G+ H + GF D +V +ALVDMY+KCG+ D +FDE+S R++V
Sbjct: 84 KSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIV 143
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLS---------------------------- 209
SWT MIT Y Q + AL +F + ++S
Sbjct: 144 SWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDG 203
Query: 210 ----DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
++VT+ +V A G + +H I ++ + SI+ MY +CG VE A
Sbjct: 204 EINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMA 263
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R FD M ++++ SW++M+ GY +G A EAL +F EM + KPN +T + +++AC++
Sbjct: 264 RKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHA 323
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G + G +H + A + D+ P V +
Sbjct: 324 GLLEEG--WHWF---------------------------KAMSHEFDVEP---GVEHYGC 351
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG----RKCF 438
++ G G+ ++A + M ++PD + + ++L AC +D G RK F
Sbjct: 352 MVDLLGRAGYLKEAFDLIKGM---KLRPDFVVWGALLGACRMHKNVDLGEISARKLF 405
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 39/259 (15%)
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
++K ++ SWNS++ ++G + EAL F M+ KPN T + +C+ L G
Sbjct: 36 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP---------------- 375
R+ H + + D + +A++DMY+KCG+L A +F++I
Sbjct: 96 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 155
Query: 376 -------------SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSI 421
+ER+V SWN +IA Y +G +++E F +M+++G + + +T +++
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215
Query: 422 LSACSHAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDML---GRAGCLYEAFDMIKQMP 477
L AC+H+G G KC D + K+ ++ V ++DM G+ +AFD +++
Sbjct: 216 LLACAHSGSQRLG-KCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE-- 272
Query: 478 LPPNDSVWGALLLACRIHG 496
N W A++ +HG
Sbjct: 273 --KNVKSWSAMVAGYGMHG 289
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y+ +L T N + D + NV SWN +IA G +AL FS M + +KP+
Sbjct: 22 YSNNPNLTTLFNKYVD----KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRS 77
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMI 473
TF + +CS + GR+ +P++ + +VDM + G L +A FD I
Sbjct: 78 TFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI 137
Query: 474 KQ 475
Sbjct: 138 SH 139
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/574 (39%), Positives = 361/574 (62%), Gaps = 11/574 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+LK C + +GK+VH ++ + F +D ++ +++ MYAKCG + +VFDEM V+D
Sbjct: 97 LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156
Query: 176 LVSWTVMITAYEQ---AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
+V+WT MIT Y Q A AL+LF + ++GL + + S+ G LG + +
Sbjct: 157 VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQ 216
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
+HG F E++ + +S+V MYARCG + ++RLVFD +E ++ +SWN++++G+ + G+
Sbjct: 217 IHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGE 276
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
EAL LF +MQ T L+ + + GS + G+ H +++ S K+ + N
Sbjct: 277 GEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNT 336
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM-LEEGV 411
++ MYAK G++ A+ +F+ + + +V S N ++ GY HG G++A+E F +M L +
Sbjct: 337 LLHMYAKSGNICDAKKVFDRL--VKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEI 394
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+P+ ITF S+L+ACSHAGL+DEG F M K ++P++ HY +VD+ GRAG L +A
Sbjct: 395 EPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKS 454
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
I++MP+ PN ++WGALL A ++H G AA + +L+P + G L+SNIYA++ +
Sbjct: 455 FIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQ 514
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W++V K+R++MK+ GLKK A S +E + F D +P +VY+ E++ +IK
Sbjct: 515 WKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKE 574
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY+PD S V+ +++E L YHSEKLA+AF ++N P +V+++ KN+RVC DCHSA
Sbjct: 575 IGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSA 634
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++S + +R+IIVRD NRFHHF G+CSC DYW
Sbjct: 635 IKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 203/390 (52%), Gaps = 11/390 (2%)
Query: 11 FYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
Y++LLK C L L+Q +H+ L S N L + I+ Y G AR +F+
Sbjct: 93 IYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRND-LVIKNSILFMYAKCGSLEIARQVFDE 151
Query: 68 IHNDKSYSFLWNTMIRAYANNGH---CVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
+ + W +MI Y+ +G+ L L+ M R G+ N + ++K C
Sbjct: 152 MCVKDVVT--WTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLG 209
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
++GK +HG + GF + +V ++LVDMYA+CG+ + VFDE+ ++ VSW +I+
Sbjct: 210 SCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALIS 269
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
+ + + EEAL LF K Q+EG + T ++ + G + + + +H + + +
Sbjct: 270 GFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKL 329
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ N+++ MYA+ GN+ A+ VFD + K D++S NSML GY Q+G EA+ LF+EM
Sbjct: 330 VGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMM 389
Query: 305 N-SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ +PN +T L +++AC++ G G + + ++ + V+D++ + G L
Sbjct: 390 LWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLL 449
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
D A++ ++ P E N + W L+ MH
Sbjct: 450 DQAKSFIEEM-PIEPNATIWGALLGASKMH 478
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/675 (35%), Positives = 372/675 (55%), Gaps = 65/675 (9%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL--------FNSIHNDKS 73
L L+Q H+ + +G + + G+ + +Y +T R L F+ + K
Sbjct: 47 LHHLKQAHALILRTGHLQDSYIAGSLV----KSYANVSTNRYLSFESSLRVFDFVR--KP 100
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
FLWN MI+ N + + LY M + N YT+P VLKAC+ ++ EG VH
Sbjct: 101 NVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVH 160
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKP 192
+++ G D ++ ++ + MYA G+ + ++ D+ D V W MI Y + +
Sbjct: 161 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEV 220
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
E A LF+ ++S N++
Sbjct: 221 EAARELFEGMPDRSMIS--------------------------------------TWNAM 242
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
++ ++RCG VE AR FD M++RD ISW++M+ GYIQ G EAL +F +MQ +P
Sbjct: 243 ISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRK 302
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
++SAC LG+ GR H Y +++++D L +++DMYAKCG +D A +F
Sbjct: 303 FVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEK 362
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ S + VSSWN +I G MHG A++ FS+M + P+ ITF +L+AC+H GL+
Sbjct: 363 M--SNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQ 417
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G F M K V+P+++HY C+VD+LGRAG L EA ++ +P P +VWGALL A
Sbjct: 418 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 477
Query: 492 CRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CR HG + L +LEP+++G + L+SNIYA + +W EVG++R+ MK +G+K
Sbjct: 478 CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTP 537
Query: 547 AFSVIEYGK-DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S+I+ G+ ++ F D +P K++Y+ ++ + ++M GY PD S L D+++E++
Sbjct: 538 GTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEK 597
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E + HSEKLA+ FG++N +P +++ KNLRVC DCHSA + IS +Y R+IIVRD R
Sbjct: 598 ETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIR 657
Query: 666 FHHFEGGTCSCNDYW 680
+HHF G CSC D+W
Sbjct: 658 YHHFRNGACSCKDFW 672
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 252/735 (34%), Positives = 401/735 (54%), Gaps = 81/735 (11%)
Query: 24 SLRQ---IHSSLTTSGLI---NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFL 77
S+RQ +H+ L SG + A HL ++ +T +P R +FL
Sbjct: 11 SVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTP-TDPLHLRYALCLFDRMPCSTFL 69
Query: 78 WNTMIRAYANNGHCVET-LELYSTMRRSGISSNSYTFPFVLKACA-SNSLILEGKVVHGD 135
++T +RA E+ L LY MRR+G+ ++++TF F+ K CA + +L +++H
Sbjct: 70 FDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAA 129
Query: 136 IIRTGFLSD-SYVQAALVDMYAKCGQTDDGCKVFDEMSVRD------------------- 175
RT S V ++ MY + G D + FD++ V+D
Sbjct: 130 CFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDD 189
Query: 176 ------------LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
++SWT +I+ Y +A + EA+ F +G+ D VT++ + SA Q
Sbjct: 190 AWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQ 249
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN---------------------- 261
L D++ +++H L + +++ MYA+CG+
Sbjct: 250 LKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNA 309
Query: 262 ----------VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
V+ AR +FD ME RDL+++NS++TGYI G+ EALLLF +M+ D + +
Sbjct: 310 MIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRAD 369
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + L++AC LG+ GR H I +++D L A++DMY KCG ++ A +F
Sbjct: 370 NFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQ 429
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ S R+V +W+ +IAG +G G+ ALE+F M +G +P+ +T+ +IL+ACSH+ L+
Sbjct: 430 AM--SVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLL 487
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
DEGR F +M L +++P ++HY CM+D+LGR+G L EA D+++ MP+ PN +W ++L
Sbjct: 488 DEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILS 547
Query: 491 ACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACR+H + AA +L +LEP+ +V + NIY S +W + ++R M+ +G+KK
Sbjct: 548 ACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKA 607
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
A +S I + F DR +P E+ +E + +K GY P S DV++E++
Sbjct: 608 AGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEK 667
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
EH L HSEK+A+AFG+++L P + + KNLRVC DCHSA + IS I+ R+IIVRD +R
Sbjct: 668 EHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSR 727
Query: 666 FHHFEGGTCSCNDYW 680
FHHF GTCSCND+W
Sbjct: 728 FHHFRDGTCSCNDFW 742
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/663 (36%), Positives = 379/663 (57%), Gaps = 14/663 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ L +G L ++ Y+ GE + A LF+++ S W MI
Sbjct: 25 KQLHALLICAGY-TPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVS--WTAMISGL 81
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ N E + + MR G + F ++ACAS I GK +H ++ G S+
Sbjct: 82 SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSEL 141
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V + L DMY+KCG D CKVF+EM +D VSWT MI Y + + EEAL+ F+K E
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 201
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ D + S A G L ++VH + F D+ + N++ MY++ G++E A
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 261
Query: 266 RLVFDM-MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
VF + E R+++S+ ++ GY++ Q + L +F E++ +PN T L+ AC
Sbjct: 262 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI-HPSERNVSSW 383
+ + G + H ++ N D + + ++DMY KCG L+ A F++I P+E +W
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE---IAW 378
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N L++ +G HG G+ A++ F +M++ GVKP+ ITF S+L+ CSHAGL++EG F M K
Sbjct: 379 NSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDK 438
Query: 444 L-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE----- 497
V P +HY+C++D+LGRAG L EA + I +MP PN W + L ACRIHG+
Sbjct: 439 TYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGK 498
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+AA L +LEP+++G VL+SNIYA +W +V +R M++ +KK +S ++ G
Sbjct: 499 LAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKT 558
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D +P +Y+K++++ +IK AGY+P D++D +E +L+ HSE++A
Sbjct: 559 HVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIA 618
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VAF ++++ + V KNLRVC DCHSA +FIS + RKIIVRD +RFHHF G+CSC
Sbjct: 619 VAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCG 678
Query: 678 DYW 680
DYW
Sbjct: 679 DYW 681
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 196/381 (51%), Gaps = 2/381 (0%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
V++ A + GK +H +I G+ +++ LV+MY+KCG+ D K+FD M R+
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
LVSWT MI+ Q K EA+ F + G + S A LG + + +H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
A+ +L + +++ MY++CG + A VF+ M +D +SW +M+ GY + G+ E
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
ALL F +M + + + + AC L + + GR H ++ + D + NA+ D
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY+K GD+++A N+F I RNV S+ LI GY K L F ++ +G++P+
Sbjct: 251 MYSKAGDMESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNE 309
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
TF+S++ AC++ +++G + A + K++ + + +VDM G+ G L +A +
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDE 369
Query: 476 MPLPPNDSVWGALLLACRIHG 496
+ P + W +L+ HG
Sbjct: 370 IG-DPTEIAWNSLVSVFGQHG 389
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 2/258 (0%)
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+L D+ + V + + + + +H IC + + N +V MY++CG ++ A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
+FD M +R+L+SW +M++G QN + SEA+ F M+ P + AC LG
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
S ++G++ H + + + + + + DMY+KCG + A +F ++ P + V SW +
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM-PCKDEV-SWTAM 178
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I GY G +AL F +M++E V D S L AC GR + + KL
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGF 238
Query: 447 KPEVKHYACMVDMLGRAG 464
+ ++ + DM +AG
Sbjct: 239 ESDIFVGNALTDMYSKAG 256
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/669 (36%), Positives = 381/669 (56%), Gaps = 19/669 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
LA +Q+H GL + L + +I Y + AR++F+++ S WN++
Sbjct: 331 LALGQQVHCMALKLGL-DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLIS--WNSV 387
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG----KVVHGDII 137
I A NG VE + L+ + R G+ + YT VLKA +S + EG K VH I
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAI 444
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ +SDS+V AL+D Y++ + +F+ + DLV+W M+ Y Q+ + L
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLK 503
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF ++G SD T+ +V G L + + + VH YAI + + DL + + I+ MY
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG++ A+ FD + D ++W +M++G I+NG+ A +F +M+ P+ T
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L A + L + + GR+ H + N D + +++DMYAKCG +D A +F I
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-- 681
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
N+++WN ++ G HG G++ L+ F QM G+KPD +TF +LSACSH+GL+ E K
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKH 741
Query: 438 FADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
M +KPE++HY+C+ D LGRAG + +A ++I+ M + + S++ LL ACR+ G
Sbjct: 742 MRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG 801
Query: 497 EI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
+ A L +LEP + +VL+SN+YAA++KW E+ R MK +KK FS I
Sbjct: 802 DTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E I F DR N + +Y+KV+ M +IK GY+P+ L DVE+E++E L Y
Sbjct: 862 EVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYY 921
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSEKLAVAFG+++ P ++V KNLRVC DCH+A ++I+ +Y R+I++RDANRFH F+
Sbjct: 922 HSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKD 981
Query: 672 GTCSCNDYW 680
G CSC DYW
Sbjct: 982 GICSCGDYW 990
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 206/420 (49%), Gaps = 5/420 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N + Y ++G L+ ++ M S + + TF +L + G+ VH ++
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G V +L++MY K + VFD MS RDL+SW +I Q EA+ L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYA 257
F + + GL D T+ SV A L + L ++ VH +AI + D + +++ Y+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
R +++A ++F+ DL++WN+M+ GY Q+ + L LF M + + T
Sbjct: 464 RNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+ C +L + G++ H Y I S +D + + ++DMY KCGD+ A+ F+ I P
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI-PVP 581
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
+V +W +I+G +G +A FSQM GV PD T ++ A S +++GR+
Sbjct: 582 DDV-AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
A+ KL+ + +VDM + G + +A+ + K++ + N + W A+L+ HGE
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE 699
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 41/384 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCV-----ETLELYSTMR 102
+I Y+ G AR +F+ + + S WN+++ AYA + CV + L+ +R
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVS--WNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+ + ++ T +LK C + + + HG + G D +V ALV++Y K G+
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+G +F+EM RD+V W +M+ AY + EEA+ L GL + +T+ +A G
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG 257
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
D A V +A N D ++I N
Sbjct: 258 DDSD---AGQVKSFANGN-----------------------------DASSVSEIIFRNK 285
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
L+ Y+ +GQ S L F +M SD + + VT +++++ + S LG++ H +
Sbjct: 286 GLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG 345
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ + T+ N++++MY K A +F+++ SER++ SWN +IAG +G +A+
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNM--SERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 403 FSQMLEEGVKPDHITFTSILSACS 426
F Q+L G+KPD T TS+L A S
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 6/211 (2%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
F F+ A S+ L+L GK H I+ + ++ L+ MY+KCG +VFD+M
Sbjct: 43 FGFLRNAITSSDLML-GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 173 VRDLVSWTVMITAYEQA-----EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
RDLVSW ++ AY Q+ E ++A +LF+ +Q+ + + +T+ + G V
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+++ HGYA D + ++V +Y + G V++ +++F+ M RD++ WN ML Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
++ G EA+ L +S PN +T +L
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA-----SEALLLFDEMQ 304
N++++MY++CG++ AR VFD M RDL+SWNS+L Y Q+ + +A LLF ++
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ +T ++ C + G FHGY + D + A++++Y K G +
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+ +F ++ R+V WN+++ Y G +A++ S G+ P+ IT
Sbjct: 198 EGKVLFEEM--PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
LG+ H I+ + L N ++ MY+KCG L A +F+ + +R++ SWN ++A
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM--PDRDLVSWNSILAA 114
Query: 390 YGMHGHG-----RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
Y ++A F + ++ V +T + +L C H+G + K+
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ + +V++ + G + E + ++MP
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/780 (31%), Positives = 406/780 (52%), Gaps = 109/780 (13%)
Query: 6 PSTEGFYDQLLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P++ F+ +L++ + + R +H + GL + ++L ++ Y G A
Sbjct: 7 PTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGL-HLGVYLMNNLMTFYAKTGSLRFAH 65
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL------------------------- 97
+F+ + ++S WNT+I YA G+ + L
Sbjct: 66 HVFDEMPLKSTFS--WNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123
Query: 98 ------YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAAL 151
++ M + + +T VL +CA+N + G+ +H +++ G S V +L
Sbjct: 124 DNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSL 183
Query: 152 VDMYAKCGQTDDGCKVFDEMSV-------------------------------RDLVSWT 180
++MYAKCG VFD M+V RD+VSW
Sbjct: 184 LNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWN 243
Query: 181 VMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
MI+ Y Q EAL +F K E L D+ T+ S+ SA L + + +H Y +
Sbjct: 244 SMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILR 303
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLV------------------------------- 268
+ N++++MYA+ G VE ARL+
Sbjct: 304 AETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAR 363
Query: 269 --FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
F+ + RD+++W +M+ GY+QNG ++AL LF M N +PN T ++S + L
Sbjct: 364 EIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLT 423
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ G++ H I + ++ NA++ MYAK G+++ A+ +F D+ ++ + SW +
Sbjct: 424 ILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSM 482
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-S 445
I HG G++A+ F +ML G+KPDHIT+ +LSAC+H GL+++GRK + MT++
Sbjct: 483 IMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHE 542
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAA 500
++P + HYACM+D+ GRAG L EA+ I+ MP+ P++ WG+LL +C+IH ++AA
Sbjct: 543 IEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAA 602
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
L ++P ++G ++ ++N+Y+A KW + R+ MK++G++K S I ++ F
Sbjct: 603 ERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAF 662
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D ++P E+YK + + EIK G++PD LHD+E+E +E +L YHSEKLA+AF
Sbjct: 663 GVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAF 722
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
G++N +++ KNLRVCNDCHSA +FIS + R+IIVRDA RFHHF+ G+CSC DYW
Sbjct: 723 GLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/648 (39%), Positives = 380/648 (58%), Gaps = 23/648 (3%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
II Y P A LF+ I S+ NT+I AYA+ G L L+S MR G+
Sbjct: 80 IIAAYAKESRPLIAHQLFDQIPEPDLVSY--NTLISAYADCGETAPALGLFSGMREMGLD 137
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T V+ AC + ++ +H + +GF S V AL+ Y K G DD +V
Sbjct: 138 MDGFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195
Query: 168 FDEMS-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
F M +RD VSW MI AY Q ++ +AL LFQ+ + GL D T+ SV +A L D
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN-VEKARLVFDMMEKRDLISWNSMLT 285
+ HG I F ++ + + ++ +Y++CG + R VF+ + + DL+ WN+M++
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315
Query: 286 GYIQNGQASE-ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
GY QN + E AL F +MQ +PN + + ++SAC+ L S G++ H + S++
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIP 375
Query: 345 ID-ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ ++ NA++ MY+KCG+L A +F+ + +E N S N +IAGY HG ++L F
Sbjct: 376 SNRISVDNALIAMYSKCGNLQDARRLFDRM--AEHNTVSLNSMIAGYAQHGIEMESLHLF 433
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGR 462
MLE + P ITF S+LSAC+H G ++EG F M K +++PE +HY+CM+D+LGR
Sbjct: 434 QWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGR 493
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLM 517
AG L EA ++I +MP P W +LL ACR HG I AAN + QLEP + +V++
Sbjct: 494 AGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVL 553
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SN+YA++ +W EV +R+ M+++G+KK S IE K I F D +P KE+Y+ +
Sbjct: 554 SNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFL 613
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDE-----DREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
E M+ ++K AGY+PD+ AL V+D+ ++E L +HSEKLAVAFG+++ V
Sbjct: 614 EEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVL 671
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLR+C DCH+A +FIS I R+I VRDA+RFH F+ G CSC DYW
Sbjct: 672 VVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 206/440 (46%), Gaps = 49/440 (11%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ----- 160
IS F +LK C + + GK +H I++ +Y + +Y+KCG+
Sbjct: 4 ISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWAR 63
Query: 161 ------TDDGC--------------------KVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+D ++FD++ DLVS+ +I+AY +
Sbjct: 64 KAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAP 123
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL LF ++ GL D T+ +V +A DV +H A+ + F + + N+++
Sbjct: 124 ALGLFSGMREMGLDMDGFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLT 181
Query: 255 MYARCGNVEKARLVF-DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
Y + G+++ A+ VF M RD +SWNSM+ Y Q+ + S+AL LF EM +
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMF 241
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC-GDLDTAENMFND 372
T +++A T L G +FHG +I + ++ + + ++D+Y+KC G + +F +
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 373 IHPSERNVSSWNVLIAGYGMHGHG-RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
I +E ++ WN +++GY + ALE F QM G +P+ +F ++SACS+
Sbjct: 302 I--TEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP 359
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVD-----MLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+G++ + L++K ++ VD M + G L +A + +M N
Sbjct: 360 SQGKQ----IHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLN 414
Query: 487 ALLLACRIHG-EIAANYLFQ 505
+++ HG E+ + +LFQ
Sbjct: 415 SMIAGYAQHGIEMESLHLFQ 434
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ +C+ L+S +QIHS S + + + + +I Y+ G AR LF+ +
Sbjct: 349 VISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
+ S N+MI YA +G +E+L L+ M I+ S TF VL ACA + EG
Sbjct: 409 NTVSL--NSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG 464
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/597 (37%), Positives = 364/597 (60%), Gaps = 11/597 (1%)
Query: 83 RAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL 142
++ ++ G + L+L ++R + + + +LK C + +G++VH ++ + FL
Sbjct: 63 KSQSDGGTGLYALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFL 119
Query: 143 SDSYV-QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+ V Q +V+MYAKCG DD ++FDEM +D+V+WT +I + Q +P +AL+LF +
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G + T+ S+ A G + +H + + + + + +++V MYARCG+
Sbjct: 180 MLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGH 239
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
++ A+L FD M + +SWN++++G+ + G+ AL L +MQ + +P T ++SA
Sbjct: 240 MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSA 299
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C +G+ + G+ H ++I S +K+ A + N ++DMYAK G +D A+ +F+ + + +V
Sbjct: 300 CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL--VKPDVV 357
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SWN ++ G HG G++ L+ F QML G++P+ I+F +L+ACSH+GL+DEG F M
Sbjct: 358 SWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM 417
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
K V+P+V HY VD+LGR G L A I++MP+ P +VWGALL ACR+H G
Sbjct: 418 KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELG 477
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
AA F+L+P +G +L+SNIYA++ +WR+V K+R+ MK G+KK A S +E
Sbjct: 478 VYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENA 537
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F D +P KE+ K E ++ +IK GY+PD S L V+ ++RE L YHSEKL
Sbjct: 538 VHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKL 597
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
A+AF ++N + +++ KN+RVC DCH+A +F+S + R+IIVRD NRFH F G+
Sbjct: 598 ALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDGS 654
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 189/386 (48%), Gaps = 6/386 (1%)
Query: 11 FYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
Y +LLK C L + Q +H+ L S ++ L L I+ Y G + AR +F+
Sbjct: 89 LYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDE 148
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ + W +I ++ N + L L+ M R G N +T +LKA S +
Sbjct: 149 MPTKDMVT--WTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLD 206
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +H ++ G+ S YV +ALVDMYA+CG D FD M + VSW +I+ +
Sbjct: 207 PGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHA 266
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ + E AL L K Q++ T SV SA +G + + + VH + I +
Sbjct: 267 RKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAF 326
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
I N+++ MYA+ G+++ A+ VFD + K D++SWN+MLTG Q+G E L F++M
Sbjct: 327 IGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIG 386
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+PN ++ L +++AC++ G G + + ++ D +D+ + G LD AE
Sbjct: 387 IEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAE 446
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMH 393
++ P E + W L+ MH
Sbjct: 447 RFIREM-PIEPTAAVWGALLGACRMH 471
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 256/648 (39%), Positives = 380/648 (58%), Gaps = 23/648 (3%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
II Y P A LF+ I S+ NT+I AYA+ G L L+S MR G+
Sbjct: 80 IIAAYAKESRPLIAHQLFDQIPEPDLVSY--NTLISAYADCGETAPALGLFSGMREMGLD 137
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T V+ AC + ++ +H + +GF S V AL+ Y K G DD +V
Sbjct: 138 MDXFTLSAVITACCDDVGLI--GQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195
Query: 168 FDEMS-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
F M +RD VSW MI AY Q ++ +AL LFQ+ + GL D T+ SV +A L D
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN-VEKARLVFDMMEKRDLISWNSMLT 285
+ HG I F ++ + + ++ +Y++CG + R VF+ + + DL+ WN+M++
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315
Query: 286 GYIQNGQASE-ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
GY QN + E AL F +MQ +PN + + ++SAC+ L S G++ H + S++
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIP 375
Query: 345 ID-ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ ++ NA++ MY+KCG+L A +F+ + +E N S N +IAGY HG ++L F
Sbjct: 376 SNRISVDNALIAMYSKCGNLQDARRLFDRM--AEHNTVSLNSMIAGYAQHGIEMESLHLF 433
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGR 462
MLE + P ITF S+LSAC+H G ++EG F M K +++PE +HY+CM+D+LGR
Sbjct: 434 QWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGR 493
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLM 517
AG L EA ++I +MP P W +LL ACR HG I AAN + QLEP + +V++
Sbjct: 494 AGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVL 553
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SN+YA++ +W EV +R+ M+++G+KK S IE K I F D +P KE+Y+ +
Sbjct: 554 SNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFL 613
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDE-----DREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
E M+ ++K AGY+PD+ AL V+D+ ++E L +HSEKLAVAFG+++ V
Sbjct: 614 EEMSGKMKRAGYVPDVRWAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVL 671
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLR+C DCH+A +FIS I R+I VRDA+RFH F+ G CSC DYW
Sbjct: 672 VVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 206/440 (46%), Gaps = 49/440 (11%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ----- 160
IS F +LK C + + GK +H I++ +Y + +Y+KCG+
Sbjct: 4 ISWTLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWAR 63
Query: 161 ------TDDGC--------------------KVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+D ++FD++ DLVS+ +I+AY +
Sbjct: 64 KAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAP 123
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL LF ++ GL D T+ +V +A DV +H A+ + F + + N+++
Sbjct: 124 ALGLFSGMREMGLDMDXFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLT 181
Query: 255 MYARCGNVEKARLVF-DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
Y + G+++ A+ VF M RD +SWNSM+ Y Q+ + S+AL LF EM +
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMF 241
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC-GDLDTAENMFND 372
T +++A T L G +FHG +I + ++ + + ++D+Y+KC G + +F +
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301
Query: 373 IHPSERNVSSWNVLIAGYGMHGHG-RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
I +E ++ WN +++GY + ALE F QM G +P+ +F ++SACS+
Sbjct: 302 I--TEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP 359
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVD-----MLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+G++ + L++K ++ VD M + G L +A + +M N
Sbjct: 360 SQGKQ----IHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMA-EHNTVSLN 414
Query: 487 ALLLACRIHG-EIAANYLFQ 505
+++ HG E+ + +LFQ
Sbjct: 415 SMIAGYAQHGIEMESLHLFQ 434
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ +C+ L+S +QIHS S + + + + +I Y+ G AR LF+ +
Sbjct: 349 VISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
+ S N+MI YA +G +E+L L+ M I+ S TF VL ACA + EG
Sbjct: 409 NTVSL--NSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG 464
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/665 (35%), Positives = 380/665 (57%), Gaps = 23/665 (3%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
QIH+ + G + L + +I + G AR +F+++ N S S WN+MI +
Sbjct: 224 QIHALVVKLGFETERL-VCNSLISMLSKSGMLRDARVVFDNMENKDSVS--WNSMIAGHV 280
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG +E E ++ M+ +G TF V+K+CAS + +V+H +++G ++
Sbjct: 281 INGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQN 340
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V AL+ KC + DD +F M V+ +VSWT MI+ Y Q ++A+ LF ++E
Sbjct: 341 VLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRRE 400
Query: 206 GLLSDSVT---IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
G+ + T I++V AV +H I + + + +++ + + GN+
Sbjct: 401 GVKPNHFTYSTILTVQHAVF-------ISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNI 453
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
A VF+++E +D+I+W++ML GY Q G+ EA +F ++ KPN T +++AC
Sbjct: 454 SDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINAC 513
Query: 323 TY-LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
T S + G++FH Y I + + ++++ +YAK G++++A +F ER++
Sbjct: 514 TAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFK--RQKERDLV 571
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SWN +I+GY HG +KALE F +M + ++ D ITF ++SAC+HAGL+ +G+ F M
Sbjct: 572 SWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIM 631
Query: 442 TK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
+ P ++HY+CM+D+ RAG L +A D+I MP PP +VW +L A R+H
Sbjct: 632 INDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIEL 691
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G++AA + LEP+H+ +VL+SNIYAA+ W E +R+ M + +KK +S IE
Sbjct: 692 GKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKN 751
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
F D +P +Y K+ + ++ GY PD + HD+EDE +E +L++HSE+
Sbjct: 752 KTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSER 811
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AFG++ PE +Q+ KNLRVC DCHS + +S + +R I+VRD+NRFHHF+GG CS
Sbjct: 812 LAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCS 871
Query: 676 CNDYW 680
C DYW
Sbjct: 872 CGDYW 876
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/479 (30%), Positives = 240/479 (50%), Gaps = 21/479 (4%)
Query: 37 LINQALHLGAKIIIKYTTYGEPNTARSLFNS--IHNDKSYSFLWNTMIRAYANNGHCVET 94
L + + L A+ +++ + +P A+ LF+ + + K + N ++ Y+ E
Sbjct: 34 LQSHVVALNARTLLRDS---DPRFAQQLFDQTPLRDLKQH----NQLLFRYSRCDQTQEA 86
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
L L+ ++ RSG+S +SYT VL CA + G+ VH ++ G + V +LVDM
Sbjct: 87 LHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDM 146
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
Y K G DG +VFDEM RD+VSW ++T Y ++ LF Q EG D T+
Sbjct: 147 YTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTV 206
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
+V +A+ G V +H + F + + NS+++M ++ G + AR+VFD ME
Sbjct: 207 STVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMEN 266
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
+D +SWNSM+ G++ NGQ EA F+ MQ + KP T ++ +C L L R
Sbjct: 267 KDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVL 326
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
H + S + + + A+M KC ++D A ++F+ +H + +V SW +I+GY +G
Sbjct: 327 HCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQ-SVVSWTAMISGYLQNG 385
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
+A+ FS M EGVKP+H T+++IL+ HA I E A++ K + +
Sbjct: 386 DTDQAVNLFSLMRREGVKPNHFTYSTILTV-QHAVFISE---IHAEVIKTNYEKSSSVGT 441
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSV--WGALLLACRIHGEI--AANYLFQLEPE 509
++D + G + +A +K L V W A+L GE AA QL E
Sbjct: 442 ALLDAFVKIGNISDA---VKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTRE 497
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/591 (39%), Positives = 337/591 (57%), Gaps = 39/591 (6%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G VH ++ G + V + +V YA G D VF+ + + + MI AY +
Sbjct: 89 GHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYAR 148
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
E + + G D T V + +L V + VHG + DL +
Sbjct: 149 YGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYV 208
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRD-------------------------------L 277
S++ +Y +CG + A VFD M RD +
Sbjct: 209 ATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI 268
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
+SW +M++GY Q+G A +AL LFDEM ++S +PN VT + ++ AC L + + GR+ H
Sbjct: 269 VSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIH 328
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ +A++ A+ MYAKCG L A N F+ ++ +E+N+ +WN +I Y +GH
Sbjct: 329 ELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGH 388
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
G +A+ F +M++ G++PD ITFT +LS CSH+GL+D G K F M T S+ P V+HYA
Sbjct: 389 GLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYA 448
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPE 509
C+ D+LGRAG L EA ++ +MP+P S+WG+LL ACR H E AA LF LEPE
Sbjct: 449 CVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPE 508
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
+TG +VL+SN+YA + +W+EV KLR +K++G KK S IE F D +P
Sbjct: 509 NTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQ 568
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
KE+Y +E++ ++K AGY PD S LHD+ +E++E L HSEKLAVAFGI+N E
Sbjct: 569 GKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAET 628
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V++VTKNLR+C DCH+A FIS IY R++IVRD NRFHHF+GG CSC DYW
Sbjct: 629 VLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 212/417 (50%), Gaps = 42/417 (10%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
Q L N L Q+H+ + GL AL +G+K++ Y + G+ +++ S+FN I +
Sbjct: 78 QFLTGLNMLKLGHQVHAHMLLRGLQPTAL-VGSKMVAFYASSGDIDSSVSVFNGI--GEP 134
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
S L+N+MIRAYA G T+ Y +M G + + +TFPFVLK+ + GK VH
Sbjct: 135 SSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVH 194
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD------------------ 175
G I+R G D YV +L+ +Y KCG+ +D KVFD M++RD
Sbjct: 195 GLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCID 254
Query: 176 -------------LVSWTVMITAYEQAEKPEEALILFQKTQQE--GLLSDSVTIVSVASA 220
+VSWT MI+ Y Q+ ++AL LF + +E G+ + VTI+SV A
Sbjct: 255 AALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPA 314
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK--RDLI 278
QL + + + +H A + + ++ AMYA+CG++ AR FD + + ++LI
Sbjct: 315 CAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLI 374
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+WN+M+T Y G +A+ F EM + +P+ +T L+S C++ G +G K+ +
Sbjct: 375 AWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNH- 433
Query: 339 INSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+++ I+ + + V D+ + G L A + ++ P S W L+A H
Sbjct: 434 MSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEM-PMPAGPSIWGSLLAACRKH 489
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 16/241 (6%)
Query: 14 QLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
+L +C L++L RQIH GL + A L A + Y G AR+ F+ ++
Sbjct: 310 SVLPACAQLSTLERGRQIHELACRMGLNSNASVLIA-LTAMYAKCGSLVDARNCFDKLNR 368
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
++ WNTMI AYA+ GH ++ + + M ++GI + TF +L C+ + L+ G
Sbjct: 369 NEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG- 427
Query: 131 VVHGDIIRTGFLSDSYVQ--AALVDMYAKCGQTDDGCKVFDEMSVRDLVS-WTVMITA-- 185
+ + + + T + + V+ A + D+ + G+ + K+ EM + S W ++ A
Sbjct: 428 LKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACR 487
Query: 186 ----YEQAEKPEEALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
E AE L + + T LLS+ V +L ++K+Q C
Sbjct: 488 KHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGC 547
Query: 240 N 240
+
Sbjct: 548 S 548
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 310 PNPVTALILV-SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
P P+ + V T L +LG + H +++ ++ A + + ++ YA GD+D++ +
Sbjct: 67 PPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVS 126
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+FN I E + +N +I Y +G + + + M G D+ TF +L +
Sbjct: 127 VFNGI--GEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVEL 184
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
+ G+ + ++ ++ ++ ++ + G+ G + +A + M + + S W AL
Sbjct: 185 LSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI-RDVSSWNAL 243
Query: 489 LLACRIHGEI-AANYLFQLEP 508
L G I AA +F+ P
Sbjct: 244 LAGYTKSGCIDAALAIFERMP 264
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/665 (36%), Positives = 377/665 (56%), Gaps = 17/665 (2%)
Query: 25 LRQIHSSLTTSGLINQALH---LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L+QIH SL IN LH +++K T + L S H FL+N++
Sbjct: 29 LKQIHVSL-----INHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFS-HTQFPNIFLYNSL 82
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I + NN ETL+L+ ++R+ G+ + +TFP VLKAC S G +H +++ GF
Sbjct: 83 INGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGF 142
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D +L+ +Y+ G+ +D K+FDE+ R +V+WT + + Y + + EA+ LF+K
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G+ DS IV V SA +GD+ + + Y ++ ++ ++V +YA+CG
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+EKAR VFD M ++D+++W++M+ GY N E + LF +M + KP+ + + +S+
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C LG+ LG I + + NA++DMYAKCG + +F ++ E+++
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM--KEKDIV 380
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
N I+G +GH + + F Q + G+ PD TF +L C HAGLI +G + F +
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 442 TKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI-----H 495
+ + ++K V+HY CMVD+ GRAG L +A+ +I MP+ PN VWGALL CR+
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
E L LEP + G +V +SNIY+ +W E ++R+ M KG+KK +S IE
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D+ +P ++Y K+E + E+++ G++P DVE+E++E +L YHSEK
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEK 620
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVA G+++ V++V KNLRVC DCH + IS I RR+I+VRD NRFH F G+CS
Sbjct: 621 LAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCS 680
Query: 676 CNDYW 680
CNDYW
Sbjct: 681 CNDYW 685
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/675 (35%), Positives = 373/675 (55%), Gaps = 65/675 (9%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL--------FNSIHNDKS 73
L L+Q H+ + +G + + G+ + +Y +T R L F+ + K
Sbjct: 48 LHHLKQAHALILRTGHLQDSYIAGSLV----KSYANVSTNRYLSFESSLRVFDFVR--KP 101
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
FLWN MI+ N + + LY M + N YT+P VLKAC+ + ++ EG VH
Sbjct: 102 NVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVH 161
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKP 192
+++ G D ++ ++ + MYA G+ + ++ D+ D V W MI Y + +
Sbjct: 162 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEV 221
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
E A LF+ ++S N++
Sbjct: 222 EAARELFEGMPDRSMIS--------------------------------------TWNAM 243
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
++ ++RCG VE AR FD M++RD ISW++M+ GYIQ G EAL +F +MQ +P
Sbjct: 244 ISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRK 303
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
++SAC LG+ GR H Y +++++D L +++DMYAKCG +D A +F
Sbjct: 304 FVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEK 363
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ S + VSSWN +I G MHG A++ FS+M + P+ ITF +L+AC+H GL+
Sbjct: 364 M--SNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQ 418
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G F M K V+P+++HY C+VD+LGRAG L EA ++ +P P +VWGALL A
Sbjct: 419 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGA 478
Query: 492 CRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CR HG + L +LEP+++G + L+SNIYA + +W EVG++R+ MK +G+K
Sbjct: 479 CRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTP 538
Query: 547 AFSVIEYGK-DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S+I+ G+ ++ F D +P K++Y+ ++ + ++M GY PD S L D+++E++
Sbjct: 539 GTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEK 598
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E + HSEKLA+ FG++N +P +++ KNLRVC DCHSA + IS +Y R+IIVRD R
Sbjct: 599 ETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIR 658
Query: 666 FHHFEGGTCSCNDYW 680
+HHF G CSC D+W
Sbjct: 659 YHHFRNGACSCKDFW 673
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/578 (39%), Positives = 346/578 (59%), Gaps = 9/578 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
+S TF L ACA + G+ V G+ D +V ++L+ +YA+ G D KVF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
D M RD V+W+ M+ + A +P +A+ ++++ +++G+ D V ++ V A +V
Sbjct: 167 DRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+VHG+ + + D+ S+V MYA+ G ++ A VF +M R+ +SW++M++G+
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFA 286
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
QNGQ+ EAL LF MQ S +P+ + + AC+ +G +LGR HG+I+ +
Sbjct: 287 QNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCI 345
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
L A +DMY+KCG L +A+ +FN I S+R++ WN +IA G HG G+ AL F +M E
Sbjct: 346 LGTAAIDMYSKCGSLASAQMLFNMI--SDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLY 467
G++PDH TF S+LSA SH+GL++EG+ F M + P KHY C+VD+L R+G +
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVE 463
Query: 468 EAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYA 522
EA D++ M P ++W ALL C + GE A+ + +L+P+ G L+SN+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523
Query: 523 ASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAV 582
A+ KW +V ++R+ MK+ G KK S IE F D+ +P +E+ KV + +
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDL 583
Query: 583 EIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCND 642
E++ GY+P HD+E+E +E L+YHSEKLA+AFG++N P + + KNLRVC D
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGD 643
Query: 643 CHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
CH A ++IS I R+I+VRDA RFHHF+ G CSC DYW
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/603 (39%), Positives = 352/603 (58%), Gaps = 41/603 (6%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+LK C + EGK VH I +G + Y+ L+DMYAKCG D KVFDEM RD
Sbjct: 125 LLKFCLKQRALKEGKQVHAHIKTSGSIG-LYISNRLLDMYAKCGSLVDAEKVFDEMVHRD 183
Query: 176 LVSWTVMITAYE-------------------------------QAEKPEEALILFQKTQQ 204
L SW +MI+ Y Q +PEEAL L++ Q+
Sbjct: 184 LCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQK 243
Query: 205 EGL-LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
S+ TI S +A + + + +HG+ + D + S++ MY +CG++E
Sbjct: 244 HDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIE 303
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+AR +FD ME+RD++SW +M+ Y++NG+ E LF + NS+ PN T +++AC
Sbjct: 304 EARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACA 363
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + LG++ H Y++ ++ +A++ MY+KCGD++ A+++F +I P + ++ SW
Sbjct: 364 DLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVF-EILP-QPDLFSW 421
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT- 442
L+ GY HG KAL FF +L+ G KPD I F +LSAC+HAGL+D+G + F +
Sbjct: 422 TSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKE 481
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI---- 498
K + + HYAC++D+L RAG EA +I +MP+ P+ +W ALL CRIHG +
Sbjct: 482 KHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAK 541
Query: 499 -AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA LF++EPE+ +V ++NIYA++ E +RE M ++G+ K S IE +++
Sbjct: 542 RAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREV 601
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D +P KE+ + + ++ +K GY+PD + LHDVE E +E L+YHSEKLA
Sbjct: 602 HVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLA 661
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VAFGI++ ++V KNLR C DCH+A +FIS I RKIIVRD+NRFH FEGG+CSC
Sbjct: 662 VAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCK 721
Query: 678 DYW 680
DYW
Sbjct: 722 DYW 724
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/741 (33%), Positives = 397/741 (53%), Gaps = 73/741 (9%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
S Y +LLK C ++IH + + N + L ++ Y + AR +F+
Sbjct: 13 SLSNHYCELLKHCR---DTKKIHCHIIKA-FRNPEIFLLNNLVSAYAKFDRITYARRVFD 68
Query: 67 SIHNDKSYSF-----------------------------LWNTMIRAYANNGHCVETLEL 97
+ YS+ WN++I AYA G +++++
Sbjct: 69 QMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKA 128
Query: 98 YSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA 156
Y+ M +G + N +L + + G VHG +++ GF S +V + LVDMY+
Sbjct: 129 YNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYS 188
Query: 157 K-------------------------------CGQTDDGCKVFDEMSVRDLVSWTVMITA 185
K C + +D ++F +M +D +SWT MI
Sbjct: 189 KTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAG 248
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+ Q EA+ LF++ + E L D T SV +A G + + + + VH Y I + ++
Sbjct: 249 FTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDN 308
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ + +++V MY +C +++ A VF M ++++SW +ML GY QNG + EA+ +F +MQN
Sbjct: 309 IFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQN 368
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+ +P+ T ++S+C L S + G +FH + S + T+ NA++ +Y KCG ++
Sbjct: 369 NGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIED 428
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
+ +F+++ S + SW L++GY G + L F ML G KPD +TF +LSAC
Sbjct: 429 SHRLFSEM--SYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSAC 486
Query: 426 SHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
S AGL+ +G + F M K + P HY CM+D+ RAG L EA I +MP P+
Sbjct: 487 SRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIG 546
Query: 485 WGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W +LL +CR H G+ AA L +LEP +T ++L+S+IYAA KW EV LR+ M++
Sbjct: 547 WASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRD 606
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
KGL+K S I+Y + F D+ NP+ ++Y ++E + ++ GY+PD++ LHD
Sbjct: 607 KGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHD 666
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
V+D ++ MLN+HSEKLA+AFG++ + P ++V KNLRVC DCH+A ++IS I +R+I+
Sbjct: 667 VDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREIL 726
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRDA RFH F+ G CSC D+W
Sbjct: 727 VRDAARFHLFKDGRCSCGDFW 747
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/681 (35%), Positives = 389/681 (57%), Gaps = 20/681 (2%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L +C + +L + IHS ++ + + + L ++ Y G A+ LF +
Sbjct: 124 YTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERM 183
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+S S WN MI AYA +GH E + LY M + + TF VL AC++ L+ +
Sbjct: 184 SGRRSVSS-WNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQ 239
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H I G D +Q AL+ MYA+C DD K+F + RD+VSW+ MI A+ +
Sbjct: 240 GRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAE 299
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ +EA+ + K Q EG+ + T SV A +GD+ +AVH + N + L
Sbjct: 300 TDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVN 359
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++V +Y G++++AR +FD +E RD W ++ GY + G + L L+ EM+N+
Sbjct: 360 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNT-- 417
Query: 309 KPNPVTALI---LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
P T +I ++SAC LG+ R+ H I M D L ++++MY++ G+L++
Sbjct: 418 TKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLES 477
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F+ + S R+ +W LIAGY HG AL + +M EG +P +TF +L AC
Sbjct: 478 ARQVFDKM--SSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYAC 535
Query: 426 SHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SHAGL ++G++ F + + ++ P + HY+C++D+L RAG L +A ++I MP+ PND
Sbjct: 536 SHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVT 595
Query: 485 WGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W +LL A RIH ++ AA + +L+P +VL+SN++A + + +R M
Sbjct: 596 WSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVA 655
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
+G+KK S IE I F+ D +P ++E++ +++ ++ +IK AGY+P+ LHD
Sbjct: 656 RGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHD 715
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
V ++++E +L HSEKLA+AFG++ P +++ LR+C+DCHSA +FIS I RR+II
Sbjct: 716 VGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREII 775
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRD++RFH F G CSC DYW
Sbjct: 776 VRDSSRFHKFRDGQCSCGDYW 796
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 258/533 (48%), Gaps = 21/533 (3%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+ G Y L+ C L S+RQIH + SG + + LG +I+ Y G +AR F++
Sbjct: 26 SSGHYRDALRQCQDLESVRQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARVAFDA 83
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I YS W +M+ AYA NGH L+LY +R + N + VL ACAS +
Sbjct: 84 IARKNDYS--WGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIEALE 138
Query: 128 EGKVVHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV-SWTVMITA 185
EGK +H I T G D ++ +L+ MYAKCG +D ++F+ MS R V SW MI A
Sbjct: 139 EGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAA 198
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y Q+ EEA+ L++ E + T SV SA LG + + + +H D
Sbjct: 199 YAQSGHFEEAIRLYEDMDVEPSVR---TFTSVLSACSNLGLLDQGRKIHALISSRGTELD 255
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
L +QN+++ MYARC ++ A +F + +RD++SW++M+ + + EA+ + +MQ
Sbjct: 256 LSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQL 315
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+PN T ++ AC +G + GR H I+ + KI A++D+Y G LD
Sbjct: 316 EGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDE 375
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP-DHITFTSILSA 424
A ++F+ I R+ W VLI GY GH LE + +M P I ++ ++SA
Sbjct: 376 ARSLFDQIE--NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISA 433
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
C+ G + R+ +D+ + + +V+M R G L A + +M +
Sbjct: 434 CASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMS-SRDTLA 492
Query: 485 WGALLLACRIHGE----IAANYLFQLEPEHTGYFVLMSNIYAASNK-WREVGK 532
W L+ HGE + +LE M +YA S+ +E GK
Sbjct: 493 WTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGK 545
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 169/325 (52%), Gaps = 28/325 (8%)
Query: 220 AVGQLGDVLKAQAVH----GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
A+ Q D+ + +H G A N FL N IV Y +CG+V AR+ FD + ++
Sbjct: 33 ALRQCQDLESVRQIHDRISGAASANVFL-----GNEIVRAYGKCGSVASARVAFDAIARK 87
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
+ SW SMLT Y QNG AL L+ M D +PNPV ++ AC + + + G+ H
Sbjct: 88 NDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIH 144
Query: 336 GYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
I + +K+D L N+++ MYAKCG L+ A+ +F + R+VSSWN +IA Y G
Sbjct: 145 SRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERM-SGRRSVSSWNAMIAAYAQSG 203
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
H +A+ + M V+P TFTS+LSACS+ GL+D+GRK A ++ + ++
Sbjct: 204 HFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN 260
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA---CRIHGEIAANY-LFQLEPE 509
++ M R CL +A + ++ LP D V W A++ A + E Y QLE
Sbjct: 261 ALLTMYARCKCLDDAAKIFQR--LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGV 318
Query: 510 HTGYFVLMSNIYAASNKWREVGKLR 534
Y+ S + A ++ VG LR
Sbjct: 319 RPNYYTFASVLLACAS----VGDLR 339
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 273/761 (35%), Positives = 396/761 (52%), Gaps = 104/761 (13%)
Query: 11 FYDQLL----KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
F ++LL KS N L RQ+ + I + +I Y G R +FN
Sbjct: 50 FLNRLLEMYCKSSN-LVYARQLFEEIPNPDAIART-----TLITAYCALGNLELGREIFN 103
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
S +N MI YA+NG LEL+ MRR + +TF VL A L+
Sbjct: 104 GTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSA-----LV 158
Query: 127 L------EGKVVHGDIIRTGF-LSDSYVQAALVDMYAK--------CGQTDDGCKVFDEM 171
L + +H +++TG S V AL+ +Y K C K+FDEM
Sbjct: 159 LFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEM 218
Query: 172 SVRDLVSWTVMITAYEQAEKP-------------------------------EEALILFQ 200
RD ++WT MIT Y + + +EAL L +
Sbjct: 219 PKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCR 278
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED----LCIQNSIVAMY 256
K + G+ D +T ++ SA +G + VH Y + N + L + N+++ +Y
Sbjct: 279 KMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLY 338
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYI---------------------------- 288
+ V++AR +F M R++I+WN++L+GY+
Sbjct: 339 CKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMIS 398
Query: 289 ---QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
QNG E L LF +M+ +P ++AC+ LG+ + GR+ H +++ +
Sbjct: 399 GLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYES 458
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
++ NA++ MYAKCG ++ AE++F + PS ++ SWN +IA G HGHG KA+E F Q
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTM-PSV-DLVSWNSMIAALGQHGHGVKAIELFDQ 516
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
ML+EGV PD ITF ++L+ACSHAGL+++GR F M + + P HYA MVD+ RAG
Sbjct: 517 MLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAG 576
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSN 519
A +I MP P VW ALL CRIHG + AA LF+L P++ G +VL+SN
Sbjct: 577 MFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSN 636
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IYA +W EV K+R+ M+++ ++K A S IE + F D V+P VY+ +E
Sbjct: 637 IYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQ 696
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ +E+K GY+PD LHD+E E +EH L+ HSEKLAV FGIM L P A V+V KN+R+
Sbjct: 697 LGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGATVRVFKNIRI 756
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+AF+F+S + RR+IIVRD RFHHF+ G CSC DYW
Sbjct: 757 CGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/663 (36%), Positives = 378/663 (57%), Gaps = 14/663 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ L +G L ++ Y+ GE + A LF+++ S W MI
Sbjct: 25 KQLHALLICAGY-TPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVS--WTAMISGL 81
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ N E + + MR G + F ++ACAS I GK +H ++ G S+
Sbjct: 82 SQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSEL 141
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V + L DMY+KCG D CKVF+EM +D VSWT MI Y + + EEAL+ F+K E
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 201
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ D + S A G L ++VH + F D+ + N++ MY++ G++E A
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 261
Query: 266 RLVFDM-MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
VF + E R+++S+ ++ GY++ Q + L +F E++ +PN T L+ AC
Sbjct: 262 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI-HPSERNVSSW 383
+ + G + H ++ N D + + ++DMY KCG L+ A F++I P+E +W
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTE---IAW 378
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N L++ +G HG G+ A++FF +M++ GVKP+ ITF S+L+ CSHAGL++EG F M K
Sbjct: 379 NSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDK 438
Query: 444 L-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE----- 497
V P +HY+C++D+LGRAG L EA + I +MP PN W + L ACRIHG+
Sbjct: 439 TYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGK 498
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+AA L +LEP+++G VL+SNIYA +W +V +R M++ +KK +S ++ G
Sbjct: 499 LAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKT 558
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D + +Y+K++ + +IK AGY+P D++D +E +L+ HSE++A
Sbjct: 559 HVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIA 618
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VAF ++++ + V KNLRVC DCHSA +FIS + RKIIVRD +RFHHF G+CSC
Sbjct: 619 VAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCG 678
Query: 678 DYW 680
DYW
Sbjct: 679 DYW 681
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 197/384 (51%), Gaps = 8/384 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
V++ A + GK +H +I G+ +++ LV+MY+KCG+ D K+FD M R+
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
LVSWT MI+ Q K EA+ F + G + S A LG + + +H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
A+ +L + +++ MY++CG + A VF+ M +D +SW +M+ GY + G+ E
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
ALL F +M + + + + AC L + + GR H ++ + D + NA+ D
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY+K GD+++A N+F I RNV S+ LI GY K L F ++ +G++P+
Sbjct: 251 MYSKAGDMESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNE 309
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL---YEAFDM 472
TF+S++ AC++ +++G + A + K++ + + +VDM G+ G L +AFD
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDE 369
Query: 473 IKQMPLPPNDSVWGALLLACRIHG 496
I P + W +L+ HG
Sbjct: 370 IGD----PTEIAWNSLVSVFGQHG 389
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 2/258 (0%)
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+L D+ + V + + + + +H IC + + N +V MY++CG ++ A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
+FD M +R+L+SW +M++G QN + SEA+ F M+ P + AC LG
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
S ++G++ H + + + + + + DMY+KCG + A +F ++ P + V SW +
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM-PCKDEV-SWTAM 178
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I GY G +AL F +M++E V D S L AC GR + + KL
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGF 238
Query: 447 KPEVKHYACMVDMLGRAG 464
+ ++ + DM +AG
Sbjct: 239 ESDIFVGNALTDMYSKAG 256
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/573 (38%), Positives = 353/573 (61%), Gaps = 12/573 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGF-LSDSYVQAALV-DMYAKCGQTDDGCKVFDEMSV 173
+L +CAS+ + + +H IR G L++ + L+ + + C ++F ++
Sbjct: 45 LLLSCASSKF--KFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQN 102
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
++ +W MI Y ++E P AL L+++ + D+ T + A+ +L DV + + V
Sbjct: 103 PNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKV 162
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H AI N F + +QN++V MYA CG+ E A +F++M +R+L++WNS++ GY NG+
Sbjct: 163 HSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRP 222
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
+EAL LF EM +P+ T + L+SAC LG+ LGR+ H Y++ + + NA+
Sbjct: 223 NEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNAL 282
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+D+YAKCG + A +F+++ E++V SW LI G ++G G++ALE F ++ +G+ P
Sbjct: 283 LDLYAKCGSIRQAHKVFDEM--EEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMP 340
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
ITF +L ACSH G++DEG F M + + P+++HY CMVD+LGRAG + +A +
Sbjct: 341 SEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEF 400
Query: 473 IKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKW 527
I+ MP+ PN VW LL AC IHG E+A L QLEP+H+G +VL+SN+YA+ +W
Sbjct: 401 IQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRW 460
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+V K+R M +G+KK S++E + F DR +P +E+Y K+ + +K+
Sbjct: 461 SDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLE 520
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
GY+P +S L D+E+E++E L+YHSEK+A+AF ++N ++V KNLRVC DCH A
Sbjct: 521 GYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAI 580
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ IS ++ R+I+VRD +RFHHF+ G CSC DYW
Sbjct: 581 KLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 201/393 (51%), Gaps = 7/393 (1%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-ARSLFNSIHNDKSYSFLWNTMIR 83
RQIH+ G+ +G +I ++ P + A +F+ I N F WNTMIR
Sbjct: 56 FRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNI--FTWNTMIR 113
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS 143
YA + + + LELY M S I +++T+PF+LKA A + EG+ VH IR GF S
Sbjct: 114 GYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFES 173
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
+VQ LV MYA CG + K+F+ M+ R+LV+W +I Y +P EAL LF++
Sbjct: 174 LVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMG 233
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
G+ D T+VS+ SA +LG + + H Y + +L N+++ +YA+CG++
Sbjct: 234 LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIR 293
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+A VFD ME++ ++SW S++ G NG EAL LF E++ P+ +T + ++ AC+
Sbjct: 294 QAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS 353
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ G G + + + M D+ + G + A ++ P + N
Sbjct: 354 HCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNM-PMQPNAVV 412
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
W L+ +HGH +Q+L+ ++P H
Sbjct: 413 WRTLLGACTIHGHLALGEVARAQLLQ--LEPKH 443
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/672 (37%), Positives = 395/672 (58%), Gaps = 26/672 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++H + T+GL++ + +G ++ Y G AR +F + + S S WN+MI
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS--WNSMITGL 390
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NG +E +E Y +MRR I S+T L +CAS G+ +HG+ ++ G +
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP-EEALILFQKTQQ 204
V AL+ +YA+ G ++ K+F M D VSW +I A ++E+ EA++ F Q+
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 205 EGLLSDSVTIVSVASA-----VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
G + +T SV SA G+LG + +HG A+ N ++ +N+++A Y +C
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGELG-----KQIHGLALKNNIADEATTENALIACYGKC 565
Query: 260 GNVEKARLVFD-MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G ++ +F M E+RD ++WNSM++GYI N ++AL L M + + + +
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+SA + + + G + H + + ++ D + +A++DMY+KCG LD A FN + R
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM--PVR 683
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKC 437
N SWN +I+GY HG G +AL+ F M +G PDH+TF +LSACSHAGL++EG K
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 438 FADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC-RIH 495
F M+ + P ++H++CM D+LGRAG L + D I++MP+ PN +W +L AC R +
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 496 G------EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
G + AA LFQLEPE+ +VL+ N+YAA +W ++ K R+ MK+ +KK A +S
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
+ + F D+ +P +YKK++ + +++ AGY+P AL+D+E E++E +L
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 923
Query: 610 NYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
+YHSEKLAVAF + + +++ KNLRVC DCHSAF++IS I R+II+RD+NRFHH
Sbjct: 924 SYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHH 983
Query: 669 FEGGTCSCNDYW 680
F+ G CSC+D+W
Sbjct: 984 FQDGACSCSDFW 995
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 229/480 (47%), Gaps = 24/480 (5%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R HS L + L ++ ++L +I Y G+ +AR +F+ + S W ++ Y
Sbjct: 21 RFFHSRLYKNRL-DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVS--WACIVSGY 77
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA--SNSLILEGKVVHGDIIRTGFLS 143
+ NG E L M + GI SN Y F VL+AC + IL G+ +HG + + +
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 144 DSYVQAALVDMYAKC-GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
D+ V L+ MY KC G F ++ V++ VSW +I+ Y QA A +F
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 203 QQEGLLSDSVTIVSVASAVGQLG--DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
Q +G T S+ + L DV + + + L DL + + +V+ +A+ G
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
++ AR VF+ ME R+ ++ N ++ G ++ EA LF +M NS +P + +IL+S
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLS 316
Query: 321 A------CTYLGSRQLGRKFHGYIINSNMKID--ATLRNAVMDMYAKCGDLDTAENMFND 372
+ +G ++ GR+ HG++I + + +D + N +++MYAKCG + A +F
Sbjct: 317 SFPEYSLAEEVGLKK-GREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVF-- 372
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
++++ SWN +I G +G +A+E + M + P T S LS+C+
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA 491
G++ + KL + V ++ + G L E + M P +D V W +++ A
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM--PEHDQVSWNSIIGA 490
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 197/421 (46%), Gaps = 24/421 (5%)
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ H + + D Y+ L++ Y + G + KVFDEM +R+ VSW +++ Y +
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV--LKAQAVHGYAICNAFLEDLC 247
+ +EAL+ + +EG+ S+ VSV A ++G V L + +HG ++ D
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 248 IQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N +++MY +C G+V A F +E ++ +SWNS+++ Y Q G A +F MQ
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 307 DCKPNPVT-ALILVSACTYLGSR-QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+P T ++ +AC+ +L + I S + D + + ++ +AK G L
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITFTSILS 423
A +FN + RN + N L+ G G +A + F M V P+ ++ +LS
Sbjct: 261 YARKVFNQMET--RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLS 316
Query: 424 ACSHAGLIDE-----GRKCFAD-MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ L +E GR+ +T V V +V+M + G + +A + M
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM- 375
Query: 478 LPPNDSV-WGALLLACRIHG-EIAANYLFQLEPEH---TGYFVLMSNIYA-ASNKWREVG 531
DSV W +++ +G I A ++ H G F L+S++ + AS KW ++G
Sbjct: 376 -TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 532 K 532
+
Sbjct: 435 Q 435
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 9/223 (4%)
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
+++ V + V S VG G A+ H N +D+ + N+++ Y G+ AR
Sbjct: 1 MTNCVPLSFVQSCVGHRG---AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARK 57
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
VFD M R+ +SW +++GY +NG+ EAL+ +M N + ++ AC +GS
Sbjct: 58 VFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGS 117
Query: 328 RQL--GRKFHGYIINSNMKIDATLRNAVMDMYAKC-GDLDTAENMFNDIHPSERNVSSWN 384
+ GR+ HG + + +DA + N ++ MY KC G + A F DI +N SWN
Sbjct: 118 VGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEV--KNSVSWN 175
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL-SACS 426
+I+ Y G R A FS M +G +P TF S++ +ACS
Sbjct: 176 SIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/604 (35%), Positives = 365/604 (60%), Gaps = 10/604 (1%)
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
+ A A+ G +TL+ ++ +++ + ++ ACA + + + +H + + F
Sbjct: 39 VPAAASTGIIRDTLD---SVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
++ +L+ +Y KCG D +VFD M RD+ SWT +I Y Q + P+EAL L
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ + T S+ A G + +H + + +D+ + ++++ MYARCG
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
++ A VFD +E ++ +SWN+++ G+ + G LL+F EMQ + + T + SA
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
+G+ + G+ H ++I S ++ A + N ++DMYAK G + A +F+ + +++V
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRV--DKKDVV 333
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
+WN ++ + +G GR+A+ F +M + GV + ITF SIL+ACSH GL+ EG++ F M
Sbjct: 334 TWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM 393
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
+ +++PE+ HY +VD+LGRAG L +A I +MP+ P +VWGALL +CR+H G
Sbjct: 394 KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG 453
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
+ AA+++F+L+P+ TG VL+ NIYA++ +W ++R+ MK G+KK A S +E
Sbjct: 454 QFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENS 513
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F D +P +E+YKK E ++++I+ AGY+P+ L V++++R+ L YHSEK+
Sbjct: 514 VHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKI 573
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
A+AF ++N+ A +++ KN+R+C DCHSAFR+IS +++R+I+VRD NRFHHF G+CSC
Sbjct: 574 ALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSC 633
Query: 677 NDYW 680
DYW
Sbjct: 634 GDYW 637
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 200/394 (50%), Gaps = 7/394 (1%)
Query: 7 STEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
+T Y L+ +C SL R IH+ L S ++ L +I Y G AR
Sbjct: 62 ATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAG-SVFLDNSLIHLYCKCGAVADARR 120
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+ + S W ++I YA N E L L M R N +TF +LKA ++
Sbjct: 121 VFDGMPARDMCS--WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGAS 178
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ G+ +H ++ + D YV +AL+DMYA+CG+ D VFD++ ++ VSW +I
Sbjct: 179 ASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALI 238
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
+ + E L++F + Q+ G + T SV SA+ +G + + + VH + I +
Sbjct: 239 AGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGER 298
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ N+I+ MYA+ G++ AR VFD ++K+D+++WNSMLT + Q G EA+ F+EM
Sbjct: 299 LSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ N +T L +++AC++ G + G+++ + N++ + V+D+ + G L
Sbjct: 359 RKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLL 418
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ A +F P + + W L+ MH + +
Sbjct: 419 NDAL-VFIFKMPMKPTAAVWGALLGSCRMHKNAK 451
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/570 (36%), Positives = 342/570 (60%), Gaps = 7/570 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
++ ACA + + + +H + R+ D ++ +L+ MY KCG D VFD + RD
Sbjct: 68 IITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRD 127
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWT +IT Y Q + P EAL L + T S A G G + +H
Sbjct: 128 VVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHA 187
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
A+ ED+ + ++++ MYARC ++ A VFD ++ ++ +SWN+++ G+ + G
Sbjct: 188 LAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGET 247
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
L+ F EMQ + T + SA +G+ + GR H ++I S K+ A + N ++
Sbjct: 248 TLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILG 307
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAK G + A +F+ + +R++ +WN ++ + +G G++A+ F ++ + G++ +
Sbjct: 308 MYAKSGSMVDARKVFDRV--DQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQ 365
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
ITF S+L+ACSH GL+ EG++ F M +V+PE+ HY VD+LGRAG L EA + +
Sbjct: 366 ITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFK 425
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ P +VWGALL ACR+H G+ AA+++F+L+PE TG VL+ NIYA++ +W +
Sbjct: 426 MPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDA 485
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
++R+ MK G+KK A S +E + F D +P +E+Y+ E + IK AGY+
Sbjct: 486 ARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYV 545
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P+ L +++++RE L YHSEK+A+AF ++N+ A +++ KN+R+C DCHSAFR++
Sbjct: 546 PNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYV 605
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S +++R+I+VRD NRFHHF G+CSC DYW
Sbjct: 606 SEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/708 (35%), Positives = 384/708 (54%), Gaps = 49/708 (6%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L +C A+L Q+H ++ G + + + +I Y GE + R +F+ +
Sbjct: 145 VLSACTKSAALTEGFQVHGAIVKMGF-ERDMFVENSLIHFYGECGEIDCMRRVFDKMSER 203
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W ++I YA G E + L+ M GI NS T V+ ACA + G+
Sbjct: 204 NVVS--WTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQ 261
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
V I ++ + ALVDMY KCG D K+FDE ++LV + +++ Y +
Sbjct: 262 VCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGL 321
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF--LEDLCIQ 249
E L + + + G D +T++S SA +L DV + HGY + N +++C
Sbjct: 322 AREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVC-- 379
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS--------------- 294
N+I+ MY +CG E A VFD M + +SWNS++ G+++NG
Sbjct: 380 NAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLV 439
Query: 295 ----------------EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
EA+ LF MQ+ + VT + + SAC YLG+ L + HGYI
Sbjct: 440 SWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYI 499
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
++ D L A++DM+A+CGD +A +FN + +R+VS+W I M G+G
Sbjct: 500 KKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM--VKRDVSAWTAAIGAMAMEGNGTG 557
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMV 457
A+E F +ML++G+KPD + F ++L+A SH GL+++G F M + + P+ HY CMV
Sbjct: 558 AIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMV 617
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTG 512
D+LGRAG L EA +I M + PND +WG+LL ACR+H + AA + +L+PE TG
Sbjct: 618 DLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTG 677
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
VL+SNIYA++ +W +V K+R +K KG K S IE I F T D +P
Sbjct: 678 IHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTH 737
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+ ++ + ++ GY+PDL+ L DV ++++E++L+ HSEKLA+AF +++ ++
Sbjct: 738 IEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIR 797
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLR+C+DCHS + +S Y R+IIVRD NRFH F+ G CSC DYW
Sbjct: 798 VAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDYW 845
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 260/521 (49%), Gaps = 47/521 (9%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGE------PNTARSLFNSIH 69
K C + L+Q+HS +T +GL + L L +I T G A LF +
Sbjct: 40 FKKCKTMTELKQLHSQITKNGLNHHPLSL-TNLISSCTEMGTFESLEYAQKALELFIEDN 98
Query: 70 NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
++++++IR ++ G + + ++ + G +++TFPFVL AC ++ + EG
Sbjct: 99 GIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEG 158
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
VHG I++ GF D +V+ +L+ Y +CG+ D +VFD+MS R++VSWT +I Y +
Sbjct: 159 FQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKR 218
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE---DL 246
+EA+ LF + + G+ +SVT+V V SA +L D+ + V C LE +
Sbjct: 219 GCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQV---CTCIGELELEVNA 275
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N++V MY +CG ++KAR +FD ++L+ +N++++ Y++ G A E L + EM
Sbjct: 276 LMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKH 335
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+P+ +T L VSAC+ L G+ HGY++ + ++ + NA+++MY KCG + A
Sbjct: 336 GPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMA 395
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHG------------------------------ 396
+F+ + R SWN LIAG+ +G
Sbjct: 396 CRVFDRMLNKTR--VSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESM 453
Query: 397 -RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
++A+E F M EG+ D +T + SAC + G +D + + K + ++
Sbjct: 454 FKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTA 513
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+VDM R G A + +M + + S W A + A + G
Sbjct: 514 LVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEG 553
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/594 (37%), Positives = 353/594 (59%), Gaps = 21/594 (3%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
++ ++++ M+ GI N +T+P +LK C + G+ +H +++TGF + YV + L+
Sbjct: 421 KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI 480
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
DMYAK G+ D K+F + D+VSWT MI Y Q +K EAL LF++ Q +G+ SD++
Sbjct: 481 DMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNI 540
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
S SA + + + + +H + + + +DL I N++V++YARCG V +A FD +
Sbjct: 541 GFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI 600
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
+D +SWNS+++G+ Q+G EAL +F +M + + N T VSA + + ++G+
Sbjct: 601 YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGK 660
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ HG I + + + NA++ +YAKCG +D DI SWN +I GY
Sbjct: 661 QIHGMIRKTGYDSETEVSNALITLYAKCGTID-------DI--------SWNSMITGYSQ 705
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVK 451
HG G +AL+ F M + V P+H+TF +LSACSH GL+DEG F M++ ++ P+ +
Sbjct: 706 HGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPE 765
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQL 506
HYAC+VD+LGR+G L A +++MP+ P+ VW LL AC +H GE AA++L +L
Sbjct: 766 HYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLEL 825
Query: 507 EPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRV 566
EP+ + +VL+SN+YA S KW + R+ MK++G+KK S +E + F D+
Sbjct: 826 EPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQN 885
Query: 567 NPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLT 626
+P +Y+ + + GY+P + L D E ++ HSE+LA+AFG+++LT
Sbjct: 886 HPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLT 945
Query: 627 PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ V KNLRVC DCH+ + +S I R IIVRD+ RFHHF+ G+CSC DYW
Sbjct: 946 SSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 220/456 (48%), Gaps = 39/456 (8%)
Query: 37 LINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLE 96
L +++ + G K+I Y +G+ N A ++F+ + +S S WN + +
Sbjct: 92 LNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEM-PIRSLS-CWNRIFNTFIAERLMGRVPG 149
Query: 97 LYSTMRRSGISSNSYTFPFVLKACASNSLILEG-KVVHGDIIRTGFLSDSYVQAALVDMY 155
L+ M + + F VL+ C+ N++ + +H I +GF S +++ L+D+Y
Sbjct: 150 LFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLY 209
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
K G KVF+ + RD VSW MI+ Q EEA++LF +
Sbjct: 210 FKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI------------- 256
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
V SA ++ + +HG + F + + N++V +Y+R GN+ A +F M +R
Sbjct: 257 -VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQR 315
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDC-KPNPVTALILVSACTYLGSRQLGRKF 334
D +S+NS+++G Q G + AL LF +M N DC KP+ VT L+SAC +G+ G++F
Sbjct: 316 DRVSYNSLISGLAQQGYINRALALFKKM-NLDCQKPDCVTVASLLSACASVGALPNGKQF 374
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
H Y I + M D + +++D+Y KC D+ TA F YG
Sbjct: 375 HSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF-----------------LCYGQLD 417
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
+ K+ + F+QM EG+ P+ T+ SIL C+ G D G + + K + V +
Sbjct: 418 NLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSS 477
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
++DM + G L A + ++ L ND V W A++
Sbjct: 478 VLIDMYAKHGKLDHALKIFRR--LKENDVVSWTAMI 511
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/664 (35%), Positives = 373/664 (56%), Gaps = 14/664 (2%)
Query: 26 RQIHSSL--TTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
+ IHS L T+ N + + + +I Y + + A +LF+ + S W+ ++
Sbjct: 49 KTIHSHLIVTSRATENSIIEVNS-LINFYAKVNQVSIAHNLFDRMPERNVVS--WSALMT 105
Query: 84 AYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL 142
Y NG ++ + L M G +S N Y + +C + EG+ HG +++TGF
Sbjct: 106 GYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFS 165
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
+YV+ ALV MY+KC D V++E+ V D+V++ ++++ + E L + +
Sbjct: 166 FHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSM 225
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
E + D VT V+ S L D+ VHG + + D + ++I+ MY +CG
Sbjct: 226 VSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKS 285
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
AR VFD ++ R+++ W +++ QNG EAL LF +M+ + K N T +L++AC
Sbjct: 286 LMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNAC 345
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
L +R+ G HG+ S K + NA+++MYAK GD++ A+ +F+D+ R++ +
Sbjct: 346 AGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDM--MHRDIIT 403
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD-M 441
WN +I G+ HG G+KAL F ML P+++TFT +LSAC H GL+ EG M
Sbjct: 404 WNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLM 463
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
+ V+P ++HY C+V +L + G L EA + ++ P+ + W LL AC +H G
Sbjct: 464 KQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLG 523
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
A ++ +++P G + L+SNIYA +W V K+R+ M++K +KK S IE G
Sbjct: 524 RWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNV 583
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
F + D +P + + Y+KV+ + IK GY PD+ LHDVEDE +E+ L+YHSEKL
Sbjct: 584 THIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKL 643
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
A+A+G++ L EA + V KNLR+C+DCHSA R IS + R I+VRDANRFHHF G CSC
Sbjct: 644 AIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCSC 703
Query: 677 NDYW 680
DYW
Sbjct: 704 LDYW 707
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/631 (37%), Positives = 354/631 (56%), Gaps = 30/631 (4%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGI--SSNSYTFPFVLKACASNSLILEGKVVHGD 135
W IR A+ G + + L+ MR S SS + P LK+CA L +H
Sbjct: 15 WAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHAL 74
Query: 136 IIRTGFLSDSYVQAALVDM----------YAKCGQTDDGC----------KVFDEMSVRD 175
IR+G +D + AL+++ + G + +G KVFDEM RD
Sbjct: 75 AIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERD 134
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
VSW +I + ++ +EAL + ++ ++G + D+ T+ +V + D+ + VHG
Sbjct: 135 AVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHG 194
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
YAI N F D+ + +S++ MYA C ++ + VFD D + WNSML GY QNG E
Sbjct: 195 YAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEE 254
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL +F M + +P PVT L+ A L +LG++ H Y+I + + + ++++D
Sbjct: 255 ALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLID 314
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KCG++D A +FN I + + SW +I GY +HG +A F +M VKP+H
Sbjct: 315 MYCKCGNVDIARRVFNGIQSPD--IVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNH 372
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
ITF ++L+ACSHAGL+D G K F M+ + P ++H A + D LGRAG L EA++ I
Sbjct: 373 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFIS 432
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
+M + P SVW LL ACR+H E A +F+LEP+ G V++SN+Y+AS +W E
Sbjct: 433 EMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNE 492
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
+LR+ M+ KG+KK A S IE + F D+ +P++ + + + ++ GY
Sbjct: 493 AAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGY 552
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
+P++ L D+E+E + +L HSEKLA+ FGI++ P ++V KNLRVC DCH A +F
Sbjct: 553 VPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKF 612
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS I R+I+VRD NRFH F+ G CSC D+W
Sbjct: 613 ISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 3/200 (1%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H +G N +G+ +I Y + + + +F+S + + LWN+M+ YA
Sbjct: 192 VHGYAIKNGFDNDVF-VGSSLIDMYANCTQMDYSMKVFDSFSDCDA--VLWNSMLAGYAQ 248
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
NG E L ++ M ++G+ TF ++ A + SL+ GK +H +IR F + ++
Sbjct: 249 NGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFI 308
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
++L+DMY KCG D +VF+ + D+VSWT MI Y EA +LF++ + +
Sbjct: 309 SSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNV 368
Query: 208 LSDSVTIVSVASAVGQLGDV 227
+ +T ++V +A G V
Sbjct: 369 KPNHITFLAVLTACSHAGLV 388
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 261/720 (36%), Positives = 382/720 (53%), Gaps = 94/720 (13%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y G R +FN S +N MI YA+NG LEL+ MRR
Sbjct: 85 LITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFR 144
Query: 108 SNSYTFPFVLKACASNSLIL------EGKVVHGDIIRTGF-LSDSYVQAALVDMYAK--- 157
+ +TF VL A L+L + +H +++TG S V AL+ +Y K
Sbjct: 145 PDDFTFTSVLSA-----LVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRAS 199
Query: 158 -----CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP-------------------- 192
C K+FDEM RD ++WT MIT Y + +
Sbjct: 200 ELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNA 259
Query: 193 -----------EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+EAL L +K + G+ D +T ++ SA +G + +H Y + N
Sbjct: 260 MISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNE 319
Query: 242 FLED----LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI--------- 288
+ L + N+++ +Y + V++AR +F M R++I+WN++L+GY+
Sbjct: 320 LNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAK 379
Query: 289 ----------------------QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
QNG E L LF +M+ +P ++AC+ LG
Sbjct: 380 SFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLG 439
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ + GR+ H +++ + ++ NA++ MYAKCG ++ AE++F + PS ++ SWN +
Sbjct: 440 ALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTM-PSV-DLVSWNSM 497
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LS 445
IA G HGHG KA+E F QML+EGV PD ITF ++L+ACSHAGL+++GR F M +
Sbjct: 498 IAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYG 557
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AA 500
+ P HYA MVD+ RAG A +I MP P VW ALL CRIHG + AA
Sbjct: 558 ITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAA 617
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
LF+L P++ G +VL+SNIYA +W +V K+R+ M+++ ++K A S IE + F
Sbjct: 618 EQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVF 677
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D V+P VY+ +E + +E+K GY+PD LHD+E E +EH L+ HSEKLAV F
Sbjct: 678 MVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGF 737
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
GIM L P+A V+V KN+R+C DCH+AF+F+S + RR+IIVRD RFHHF+ G CSC DYW
Sbjct: 738 GIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%)
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
DA R ++ Y G+L+ +FN R+ +N +I GY +G G ALE F
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 406 MLEEGVKPDHITFTSILSA 424
M + +PD TFTS+LSA
Sbjct: 138 MRRDDFRPDDFTFTSVLSA 156
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/674 (34%), Positives = 374/674 (55%), Gaps = 12/674 (1%)
Query: 15 LLKSCNFLASLR--QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
+LK C +LR QI SL + ++ Y+ G A +F I +
Sbjct: 336 VLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPD 395
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
S W+ +I G E E++ MR SG+ N +T ++ A + G+ +
Sbjct: 396 VVS--WSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI 453
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H + + GF D+ V ALV MY K G DGC+VF+ + RDL+SW +++ + E
Sbjct: 454 HACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETC 513
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+ L +F + EG + T +S+ + L DV + VH + N+ + + ++
Sbjct: 514 DTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTAL 573
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V MYA+ +E A +F+ + KRDL +W ++ GY Q+GQ +A+ F +MQ KPN
Sbjct: 574 VDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNE 633
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T +S C+ + + GR+ H I + D + +A++DMYAKCG ++ AE +F+
Sbjct: 634 FTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDG 693
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ R+ SWN +I GY HG G KAL+ F ML+EG PD +TF +LSACSH GLI+
Sbjct: 694 L--VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIE 751
Query: 433 EGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG+K F ++K+ + P ++HYACMVD+LGRAG +E I++M L N +W +L A
Sbjct: 752 EGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 811
Query: 492 CRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C++HG I AA LF+LEPE ++L+SN++AA W +V +R M +G+KK
Sbjct: 812 CKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEP 871
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S +E + F + D +P +E++ K++ + ++ GY P+ LH+V D +++
Sbjct: 872 GCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQ 931
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
+L YHSE+LA+AF +++ + +++ KNLR+C DCH + IS I ++++VRD N F
Sbjct: 932 ELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCF 991
Query: 667 HHFEGGTCSCNDYW 680
HHF+ G+CSC ++W
Sbjct: 992 HHFKNGSCSCQNFW 1005
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 159/505 (31%), Positives = 262/505 (51%), Gaps = 18/505 (3%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MRR G F Y LK+C+ L +Q+H+ G + L +G+ ++ Y G
Sbjct: 220 MRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSD-LFVGSALVDLYAKCG 278
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
E A +F + + S WN ++ +A G + L L+ M S I+ + +T V
Sbjct: 279 EMVLAERVFLCMPKQNAVS--WNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTV 336
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
LK CA++ + G++VH IR G D ++ LVDMY+KCG D KVF + D+
Sbjct: 337 LKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDV 396
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW+ +IT +Q + EA +F++ + G++ + T+ S+ SA LGD+ +++H
Sbjct: 397 VSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHAC 456
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
F D + N++V MY + G+V+ VF+ RDLISWN++L+G+ N
Sbjct: 457 VCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTG 516
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L +F++M PN T + ++ +C+ L LG++ H I+ +++ + + A++DM
Sbjct: 517 LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDM 576
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAK L+ AE +FN + +R++ +W V++AGY G G KA++ F QM EGVKP+
Sbjct: 577 YAKNRFLEDAETIFNRL--IKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEF 634
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMI 473
T S LS CS +D GR+ + K ++ + +VDM + GC+ +A FD
Sbjct: 635 TLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFD-- 692
Query: 474 KQMPLPPNDSV-WGALLLACRIHGE 497
L D+V W ++ HG+
Sbjct: 693 ---GLVSRDTVSWNTIICGYSQHGQ 714
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 246/521 (47%), Gaps = 15/521 (2%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L++C L + IH + SG IN HL ++ Y G N A +F I
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSG-INPDSHLWNSLVNVYAKCGSANYACKVFGEI 189
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W +I + G+ + L+ MRR G+ +N +T+ LKAC S L LE
Sbjct: 190 PERDVVS--WTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKAC-SMCLDLE 246
Query: 129 -GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
GK VH + I+ G SD +V +ALVD+YAKCG+ +VF M ++ VSW ++ +
Sbjct: 247 FGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFA 306
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q E+ L LF + + T+ +V G++ Q VH AI D
Sbjct: 307 QMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEF 366
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
I +V MY++CG A VF +E D++SW++++T Q GQ+ EA +F M++S
Sbjct: 367 ISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSG 426
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN T LVSA T LG G H + + D T+ NA++ MY K G +
Sbjct: 427 VIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGC 486
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F + R++ SWN L++G+ + L F+QML EG P+ TF SIL +CS
Sbjct: 487 RVFE--ATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSS 544
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
+D G++ A + K S+ +VDM + L +A + ++ + + W
Sbjct: 545 LSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTV 603
Query: 488 LL--LACRIHGEIAANYLFQLEPE--HTGYFVLMSNIYAAS 524
++ A GE A Q++ E F L S++ S
Sbjct: 604 IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCS 644
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 257/777 (33%), Positives = 408/777 (52%), Gaps = 117/777 (15%)
Query: 13 DQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP----NTARSLFNSI 68
D LL+SC +Q+ S +GLI A +I ++++ + + +FN +
Sbjct: 7 DSLLQSCKCPRHFKQLLSQTILTGLITDPY--AASRLINFSSHSTTLVPFHYSLRIFNHL 64
Query: 69 HNDKSYSFLWNTMIRAY---ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
N + F WNT++RA+ N+ H + L Y S +SYT+P +L+ CA+
Sbjct: 65 RNPNT--FTWNTIMRAHLYLQNSPH--QALLHYKLFLASHAKPDSYTYPILLQCCAARVS 120
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC--------------------------- 158
EG+ +H + +GF D YV+ L+++YA C
Sbjct: 121 EFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAG 180
Query: 159 ----GQTDDGCKVFDEMSVR---------------------------------DLVSWTV 181
G+ ++ +VF+ M R D+VSW+
Sbjct: 181 YVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSA 240
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI--- 238
M++ YEQ E EEAL+LF + + G+ D V +VS SA ++ +V + VHG A+
Sbjct: 241 MVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVG 300
Query: 239 -----------------CNAFLE------------DLCIQNSIVAMYARCGNVEKARLVF 269
C ++ DL NS+++ Y RCG+++ A ++F
Sbjct: 301 VEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLF 360
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
M ++D++SW++M++GY Q+ SEAL LF EMQ +P+ + +SACT+L +
Sbjct: 361 YSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLD 420
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
LG+ H YI + ++++ L ++DMY KCG ++ A +F + E+ VS+WN +I G
Sbjct: 421 LGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAM--EEKGVSTWNAVILG 478
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKP 448
M+G ++L F+ M + G P+ ITF +L AC H GL+++GR F M + ++
Sbjct: 479 LAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEA 538
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYL 503
+KHY CMVD+LGRAG L EA ++I MP+ P+ + WGALL ACR H GE L
Sbjct: 539 NIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKL 598
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA 563
QL+P+H G+ VL+SNIYA+ W V ++R M G+ K S+IE + F
Sbjct: 599 IQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAG 658
Query: 564 DRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIM 623
D+ +P ++ ++ +A ++K+ GY+P S D+++E++E L HSEKLAVAFG++
Sbjct: 659 DKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLI 718
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++P ++VTKNLR+CNDCH+ + IS + R I+VRD +RFHHF+ G CSC D+W
Sbjct: 719 TISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 350/582 (60%), Gaps = 7/582 (1%)
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
S I ++ + +LK C L+++G++VH I+++ F D + L++MYAKCG ++
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
KVF++M RD V+WT +I+ Y Q ++P +AL+ F + + G + T+ SV A
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+HG+ + F ++ + ++++ +Y R G ++ A+LVFD +E R+ +SWN++
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ G+ + +AL LF M +P+ + L AC+ G + G+ H Y+I S
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
K+ A N ++DMYAK G + A +F+ + ++R+V SWN L+ Y HG G++A+ +F
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRL--AKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
+M G++P+ I+F S+L+ACSH+GL+DEG + M K + PE HY +VD+LGRA
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L A I++MP+ P ++W ALL ACR+H G AA ++F+L+P+ G V++
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA+ +W + ++R+ MK G+KK A S +E I F D +P +E+ +K E
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 531
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ +IK GY+PD S + V+ ++RE L YHSEK+A+AF ++N P + + + KN+R
Sbjct: 532 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 591
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH+A + S + R+IIVRD NRFHHF+ G CSC DYW
Sbjct: 592 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 218/450 (48%), Gaps = 14/450 (3%)
Query: 6 PSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P+ FY+ LLK C L R +H+ + S + + +G ++ Y G AR
Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F + + W T+I Y+ + + L ++ M R G S N +T V+KA A+
Sbjct: 116 KVFEKMPQRDFVT--WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
G +HG ++ GF S+ +V +AL+D+Y + G DD VFD + R+ VSW +
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I + + E+AL LFQ ++G + S+ A G + + + VH Y I +
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
N+++ MYA+ G++ AR +FD + KRD++SWNS+LT Y Q+G EA+ F+E
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M+ +PN ++ L +++AC++ G G ++ + + +A V+D+ + GD
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFT 419
L+ A ++ P E + W L+ MH + G A E ++ + P H+
Sbjct: 414 LNRALRFIEEM-PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP-HVILY 471
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPE 449
+I ++ G ++ + M + VK E
Sbjct: 472 NIYAS---GGRWNDAARVRKKMKESGVKKE 498
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/706 (35%), Positives = 390/706 (55%), Gaps = 45/706 (6%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C+ + + Q+H + GL+ L + +I Y G+ + R +F+ +
Sbjct: 128 LLSACSKIMAFSEGVQVHGVVVKMGLVKD-LFVANSLIHFYAACGKVDLGRKVFDEMLER 186
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W ++I Y+ E + L+ M G+ N T + ACA + GK
Sbjct: 187 NVVS--WTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKK 244
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
V + G S++ V AL+DMY KCG ++FDE S ++LV + +++ Y Q
Sbjct: 245 VCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGL 304
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E L++ + Q+G D VT++S +A QLGD+ ++ H Y N I N+
Sbjct: 305 AGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNA 364
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG-------------------- 291
I+ MY +CG E A VFD M + +++WNS++ G +++G
Sbjct: 365 IIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSW 424
Query: 292 --------QAS---EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
QAS EA+ L EMQN K + VT + + SAC YLG+ L + + YI
Sbjct: 425 NTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEK 484
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+++ ID L A++DM+++CGD A +F ++ +R+VS+W I + G+ + A+
Sbjct: 485 NDIHIDMQLGTALVDMFSRCGDPLNAMRVFENME--KRDVSAWTAAIRVKAVEGNAKGAI 542
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDM 459
E F +ML++ VK D F ++L+A SH G +D+GR+ F M K+ V P++ HY CMVD+
Sbjct: 543 ELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDL 602
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANY----LFQLEPEHTGYF 514
LGRAG L EAFD++K MP+ PND +WG+ L ACR H + ANY + QL PE G
Sbjct: 603 LGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIH 662
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
VL+SNIYA++ KW +V ++R MK KG +K A S IE I+ F + D + ++
Sbjct: 663 VLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIG 722
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
++ + I GY+PD + L DV+++++EH+L+ HSEKLA+A+G++N ++V
Sbjct: 723 LMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVV 782
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C+DCHS + +S +Y R+I VRD NR+H F+ G CSC D+W
Sbjct: 783 KNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 261/530 (49%), Gaps = 47/530 (8%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
L +T+ + L++C L L+Q+H ++ G+ N + A ++ T+ N A +
Sbjct: 17 LPTTTQKPKNSSLQTCKTLIELKQLHCNMLKKGVFNINKLIAA--CVQMGTHESLNYALN 74
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACAS 122
F K + NT+IR YA +G C E + +Y M GI +++TFPF+L AC+
Sbjct: 75 AFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSK 134
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
EG VHG +++ G + D +V +L+ YA CG+ D G KVFDEM R++VSWT +
Sbjct: 135 IMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSL 194
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I Y +EA+ LF + + G+ + VT+V SA +L D+ G +CN
Sbjct: 195 INGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDL-----ELGKKVCNLM 249
Query: 243 LE-----DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
E + + N+++ MY +CG++ R +FD ++L+ +N++++ Y+Q+G A E L
Sbjct: 250 TELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVL 309
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
++ DEM +P+ VT L ++AC LG +G+ H Y+ + ++ + NA++DMY
Sbjct: 310 VVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMY 369
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE--------- 408
KCG + A +F+ + S + V +WN LIAG G AL F +M E
Sbjct: 370 MKCGKREAACKVFDSM--SNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTM 427
Query: 409 ----------------------EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
+G+K D +T I SAC + G +D + + + K +
Sbjct: 428 IGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDI 487
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+++ +VDM R G A + + M + S W A + + G
Sbjct: 488 HIDMQLGTALVDMFSRCGDPLNAMRVFENME-KRDVSAWTAAIRVKAVEG 536
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 222/460 (48%), Gaps = 40/460 (8%)
Query: 107 SSNSYTFPFVLKACASNSL-----ILEGKVVHGDIIRTGFLSDSYVQAALVDM------- 154
SS+ P + ++SL ++E K +H ++++ G + + + AA V M
Sbjct: 11 SSSPLLLPTTTQKPKNSSLQTCKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLN 70
Query: 155 YA-KCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF-QKTQQEGLLSDSV 212
YA + D+G K L + +I Y + +EA+ ++ G++ D+
Sbjct: 71 YALNAFKEDEGTKC-------SLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNF 123
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
T + SA ++ + VHG + ++DL + NS++ YA CG V+ R VFD M
Sbjct: 124 TFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEM 183
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
+R+++SW S++ GY A EA+ LF EM +PNPVT + +SAC L +LG+
Sbjct: 184 LERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGK 243
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
K + +K + + NA++DMY KCGD+ +F++ S++N+ +N +++ Y
Sbjct: 244 KVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEF--SDKNLVMYNTIMSNYVQ 301
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
HG + L +ML++G +PD +T S ++AC+ G + G+ A + + ++
Sbjct: 302 HGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNI 361
Query: 453 YACMVDMLGRAG---CLYEAFDMIKQMPLPPNDSVW------GALLLACRIHGEIAANYL 503
++DM + G + FD + + +S+ G L LA RI GE+
Sbjct: 362 SNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMP---- 417
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
E + ++ + AS + LRE M+N+G+K
Sbjct: 418 ---ESNLVSWNTMIGAMVQASMFEEAIDLLRE-MQNQGIK 453
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/665 (36%), Positives = 382/665 (57%), Gaps = 15/665 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H +GL + + +G +I Y G+ + ARS+F + + S S WN+MI
Sbjct: 122 RQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVS--WNSMITGL 179
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
N + ++ Y++MR++G+ +++ L +CAS IL G+ HG+ I+ G D
Sbjct: 180 DQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDV 239
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY-EQAEKPEEALILFQKTQQ 204
V L+ +YA+ + + KVF M RD VSW +I A + EA+ +F + +
Sbjct: 240 SVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMR 299
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G + VT +++ + V L + +H + +D I+N+++A Y + G +E
Sbjct: 300 AGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMEN 359
Query: 265 ARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+F M E+RD +SWNSM++GYI N +A+ L M + + T ++SAC
Sbjct: 360 CEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACA 419
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ + + G + H I + ++ D + +A++DMY+KCG +D A FN + P RN+ SW
Sbjct: 420 TVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFN-LMPV-RNLYSW 477
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I+GY HGHG AL F++M G PDHITF +LSACSH GL+DEG + F MT+
Sbjct: 478 NSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTE 537
Query: 444 L-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC-------RIH 495
+ + P V+HY+CMVD+LGRAG L + + I +MP+ PN +W +L AC
Sbjct: 538 VYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTEL 597
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G AA LF ++P++ +VL+SN+YA+ KW ++ + R M+ +KK A S +
Sbjct: 598 GRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKD 657
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D +P +Y K++ + +I+ AGY+P + AL+D+E E++E +L+YHSEK
Sbjct: 658 GVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEK 717
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVAF ++ +++ KNLRVC DCHSAF++IS + R I++RD+NRFHHFE G CS
Sbjct: 718 LAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCS 776
Query: 676 CNDYW 680
C DYW
Sbjct: 777 CRDYW 781
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 246/488 (50%), Gaps = 16/488 (3%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
L L +I Y G+ +AR LF+ + + + W +I Y NG + + M
Sbjct: 35 LFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVT--WACLISGYTQNGMPEDACGVLKEM 92
Query: 102 RRSGISSNSYTFPFVLKACASNSLI-LEGKVVHGDIIRTGFLSDSYVQA--ALVDMYAKC 158
G N + F ++AC + L +G+ VHG IRTG L+D+ V L++MYAKC
Sbjct: 93 IFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTG-LNDAKVAVGNGLINMYAKC 151
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
G D VF M +D VSW MIT +Q + E+A+ + ++ GL+ + ++S
Sbjct: 152 GDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISAL 211
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
S+ LG +L Q HG I D+ + N+++A+YA + + + VF M +RD +
Sbjct: 212 SSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQV 271
Query: 279 SWNSMLTGYIQNGQA-SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
SWN+++ +G + SEA+ +F EM + PN VT + L++ + L + +L + H
Sbjct: 272 SWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHAL 331
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
I+ N+K D + NA++ Y K G+++ E +F+ + R+ SWN +I+GY +
Sbjct: 332 ILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRM-SERRDEVSWNSMISGYIHNELLC 390
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
KA++ M++ G + D TF ++LSAC+ ++ G + A + ++ +V + +V
Sbjct: 391 KAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALV 450
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLFQLE-----PEH 510
DM + G + A MP+ N W +++ A HG+ A +++ P+H
Sbjct: 451 DMYSKCGRIDYASRFFNLMPV-RNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDH 509
Query: 511 TGYFVLMS 518
+ ++S
Sbjct: 510 ITFVGVLS 517
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 193/374 (51%), Gaps = 6/374 (1%)
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+ + H ++++ GF SD ++ L+++Y + G K+FDEM R+ V+W +I+ Y
Sbjct: 18 DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ-LGDVLKAQAVHGYAICNAFLE-D 245
Q PE+A + ++ EG L + S A + + K + VHGYAI +
Sbjct: 78 QNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAK 137
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ + N ++ MYA+CG+++ AR VF +M +D +SWNSM+TG QN +A+ ++ M+
Sbjct: 138 VAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRK 197
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+ P+ + +S+C LG LG++ HG I + +D ++ N ++ +YA+ L
Sbjct: 198 TGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAE 257
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHG-RKALEFFSQMLEEGVKPDHITFTSILSA 424
+ +F+ + ER+ SWN +I G +A+E F +M+ G P+ +TF ++L+
Sbjct: 258 CQKVFSWM--LERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLAT 315
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
S + A + K +VK + ++ G++G + ++ +M ++
Sbjct: 316 VSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS 375
Query: 485 WGALLLACRIHGEI 498
W + +++ IH E+
Sbjct: 376 WNS-MISGYIHNEL 388
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 20/291 (6%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKIIIK------------YTTYGEPNTARSLFNS 67
N LA++ SSL+TS L +Q L K +K Y GE +F+
Sbjct: 311 NLLATV----SSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSR 366
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ +++ WN+MI Y +N + ++L M + G + +TF VL ACA+ + +
Sbjct: 367 M-SERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLE 425
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G VH IR SD + +ALVDMY+KCG+ D + F+ M VR+L SW MI+ Y
Sbjct: 426 CGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYA 485
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA-QAVHGYAICNAFLEDL 246
+ + AL LF + + G L D +T V V SA +G V + + + +
Sbjct: 486 RHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRV 545
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMME-KRDLISWNSMLTGYIQ-NGQASE 295
+ +V + R G ++K + M K +++ W ++L + NG+ +E
Sbjct: 546 EHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTE 596
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/651 (35%), Positives = 379/651 (58%), Gaps = 16/651 (2%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
L L +I+ Y G A +F+ + S W ++ + NG+ +E+L L+S M
Sbjct: 7 LMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVS--WTALMCGHIQNGNPLESLLLFSKM 64
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
SG+ N +TF LKAC + + G+ +H ++TGF + V +++DMY+KCG+
Sbjct: 65 GLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRI 124
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
++ +F+ M VR+L+SW MI Y A E+AL+LFQK Q+ G D T S A
Sbjct: 125 NEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKAC 184
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDL--CIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
LG + + +H + I FL + + +++ +Y +CG + AR VF +E++ +IS
Sbjct: 185 SDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVIS 244
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
W +++ GY Q G +E++ LF +++ S + + ++ Q G++ H + I
Sbjct: 245 WTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAI 304
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+D ++ N+++DMY KCG ++ AE +F+++ P+ RNV SW V+I GYG HG G++A
Sbjct: 305 KVPSGVDISVCNSILDMYLKCGMINEAERLFSEM-PA-RNVISWTVMITGYGKHGLGKEA 362
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
+ F +M + +PD +T+ ++L CSH+GL+++G++ F+ + +K V+HYACMVD
Sbjct: 363 IRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVD 422
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGY 513
+LGRAG L EA +++ MPL N +W LL ACR+HG++ L +L+ E+
Sbjct: 423 LLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVN 482
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+V+MSNIYA + W+E ++RE +K+K LKK A S +E K++ F+ D +P +++
Sbjct: 483 YVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKI 542
Query: 574 YKKVESMAVEIKMA-GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE---A 629
++ ++ M +K GY+ + ALHDVE+E + L HSEKLA+ ++ E
Sbjct: 543 HEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRK 602
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V++V KNLRVC DCH + +S I R +VRDANRFH FE G CSC DYW
Sbjct: 603 VIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 194/385 (50%), Gaps = 10/385 (2%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LK+C L L RQIH +G + +G II Y+ G N A +F +
Sbjct: 80 LKACGLLNGLDIGRQIHDICVKTGF-DMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRN 138
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
S WN MI Y G C + L L+ M+ G + +TF LKAC+ I EG +
Sbjct: 139 LIS--WNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQI 196
Query: 133 HGDIIRTGFL--SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
H +I GFL ++ V AL+D+Y KCG+ +VF + + ++SWT +I Y Q
Sbjct: 197 HAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEG 256
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
E++ LF++ ++ + D + S+ V + + +H +AI D+ + N
Sbjct: 257 NLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCN 316
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
SI+ MY +CG + +A +F M R++ISW M+TGY ++G EA+ LFDEMQ +P
Sbjct: 317 SILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEP 376
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIIN-SNMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ VT L ++ C++ G + G+++ + + +K ++D+ + G L A+N+
Sbjct: 377 DDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNL 436
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHG 394
+ + P E NV W L++ +HG
Sbjct: 437 VDSM-PLEANVGIWQTLLSACRVHG 460
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/637 (38%), Positives = 356/637 (55%), Gaps = 49/637 (7%)
Query: 78 WNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN M+ YA NG E E+++ M R+ IS N +L A N + E + +
Sbjct: 142 WNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNG-----LLAAYVHNGRLKEARRLFESQ 196
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+S L+ Y K D ++FD M VRD++SW MI+ Y Q +A
Sbjct: 197 SNWELIS----WNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAK 252
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA----------------VHGYA--- 237
LF E + D T ++ S Q G V +A+ + GY
Sbjct: 253 RLFN----ESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYK 308
Query: 238 ---ICNAFLE-----DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
I E ++ N+++ Y + G + +AR +FDMM +RD +SW ++++GY Q
Sbjct: 309 KMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQ 368
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
NG EAL +F EM+ N T +S C + + +LG++ HG ++ + + +
Sbjct: 369 NGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFV 428
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
NA++ MY KCG D A ++F I E++V SWN +IAGY HG GR+AL F M +
Sbjct: 429 GNALLGMYFKCGSTDEANDVFEGIE--EKDVVSWNTMIAGYARHGFGRQALVLFESMKKA 486
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYE 468
GVKPD IT +LSACSH+GLID G + F M + +VKP KHY CM+D+LGRAG L E
Sbjct: 487 GVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEE 546
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAA 523
A ++++ MP P + WGALL A RIHG E AA +F++EP+++G +VL+SN+YAA
Sbjct: 547 AENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAA 606
Query: 524 SNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE 583
S +W +VGK+R M+ G++K +S +E I F D +P +Y +E + ++
Sbjct: 607 SGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLK 666
Query: 584 IKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
++ GY+ LHDVE+E++EHML YHSEKLAVAFGI+ + ++V KNLRVC DC
Sbjct: 667 MRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDC 726
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
H+A + IS I R II+RD++RFHHF G CSC DYW
Sbjct: 727 HNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 180/427 (42%), Gaps = 83/427 (19%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ + + G D +VF+ M R VS+ MI+ Y + K A LF K + L S +
Sbjct: 53 ISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWN 112
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
V + Y R + +A +FD+
Sbjct: 113 VMLTG---------------------------------------YVRNRRLGEAHKLFDL 133
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M K+D++SWN+ML+GY QNG EA +F++M + N ++ L++A + G +
Sbjct: 134 MPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEA 189
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
R+ + S + N +M Y K L A +F+ + R+V SWN +I+GY
Sbjct: 190 RR----LFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRM--PVRDVISWNTMISGYA 243
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
G +A F+ E D T+T+++S G++DE RK F +M VK E+
Sbjct: 244 QVGDLSQAKRLFN----ESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP---VKNEIS 296
Query: 452 HYACMVDMLGR-----AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYLFQ 505
+ A + + AG L+EA MP N S W ++ +G IA A LF
Sbjct: 297 YNAMLAGYVQYKKMVIAGELFEA------MPC-RNISSWNTMITGYGQNGGIAQARKLFD 349
Query: 506 LEPEH--TGYFVLMSNIYAASNKWREVGKLREDMKNKG-----------LKKPAAFSVIE 552
+ P+ + ++S YA + + E + +MK G L A + +E
Sbjct: 350 MMPQRDCVSWAAIISG-YAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALE 408
Query: 553 YGKDIQG 559
GK + G
Sbjct: 409 LGKQVHG 415
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/681 (35%), Positives = 387/681 (56%), Gaps = 21/681 (3%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L +C + +L + IHS ++ + + + L ++ Y G A+ LF +
Sbjct: 124 YTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERM 183
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WN MI AYA +GH E + LY M + + TF VL AC++ L+ +
Sbjct: 184 SGRSVSS--WNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQ 238
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H I G D +Q AL+ MYA+C DD K+F + RD+VSW+ MI A+ +
Sbjct: 239 GRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAE 298
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ +EA+ + K Q EG+ + T SV A +GD+ +AVH + N + L
Sbjct: 299 TDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVN 358
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++V +Y G++++AR +FD +E RD W ++ GY + G + L L+ EM+N+
Sbjct: 359 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNT-- 416
Query: 309 KPNPVTALI---LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
P T +I ++SAC LG+ R+ H I M D L ++++MY++ G+L++
Sbjct: 417 TKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLES 476
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F+ + S R+ +W LIAGY HG AL + +M EG +P +TF +L AC
Sbjct: 477 ARQVFDKM--SSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYAC 534
Query: 426 SHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SHAGL ++G++ F + + ++ P + HY+C++D+L RAG L +A ++I MP+ PND
Sbjct: 535 SHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVT 594
Query: 485 WGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W +LL A RIH ++ AA + +L+P +VL+SN++A + + +R M
Sbjct: 595 WSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVA 654
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
+G+KK S IE I F+ D +P ++E++ +++ ++ +IK AGY+P+ LHD
Sbjct: 655 RGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHD 714
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
V ++++E +L HSEKLA+AFG++ P +++ LR+C+DCHSA +FIS I RR+II
Sbjct: 715 VGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREII 774
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRD++RFH F G CSC DYW
Sbjct: 775 VRDSSRFHKFRDGQCSCGDYW 795
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 259/532 (48%), Gaps = 20/532 (3%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+ G Y L+ C L S+RQIH + SG + + LG +I+ Y G +AR+ F++
Sbjct: 26 SSGHYRDALRQCQDLESVRQIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARAAFDA 83
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I YS W +M+ AYA NGH L+LY +R + N + VL ACAS +
Sbjct: 84 IARKNDYS--WGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIKALE 138
Query: 128 EGKVVHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
EGK +H I T G D ++ +L+ MYAKCG +D ++F+ MS R + SW MI AY
Sbjct: 139 EGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAY 198
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q+ EEA+ L++ E + T SV SA LG + + + +H DL
Sbjct: 199 AQSGHFEEAIRLYEDMDVEPSVR---TFTSVLSACSNLGLLDQGRKIHALISSRGTELDL 255
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+QN+++ MYARC ++ A +F + +RD++SW++M+ + + EA+ + +MQ
Sbjct: 256 SLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLE 315
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+PN T ++ AC +G + GR H I+ + KI A++D+Y G LD A
Sbjct: 316 GVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEA 375
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP-DHITFTSILSAC 425
++F+ I R+ W VLI GY GH LE + +M P I ++ ++SAC
Sbjct: 376 RSLFDQIE--NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISAC 433
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
+ G + R+ +D+ + + +V+M R G L A + +M + W
Sbjct: 434 ASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMS-SRDTLAW 492
Query: 486 GALLLACRIHGE----IAANYLFQLEPEHTGYFVLMSNIYAASNK-WREVGK 532
L+ HGE + +LE M +YA S+ +E GK
Sbjct: 493 TTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGK 544
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 169/325 (52%), Gaps = 29/325 (8%)
Query: 220 AVGQLGDVLKAQAVH----GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
A+ Q D+ + +H G A N FL N IV Y +CG+V AR FD + ++
Sbjct: 33 ALRQCQDLESVRQIHDRISGAASANVFL-----GNEIVRAYGKCGSVASARAAFDAIARK 87
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
+ SW SMLT Y QNG AL L+ M D +PNPV ++ AC + + + G+ H
Sbjct: 88 NDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIH 144
Query: 336 GYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
I + +K+D L N+++ MYAKCG L+ A+ +F + S R+VSSWN +IA Y G
Sbjct: 145 SRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERM--SGRSVSSWNAMIAAYAQSG 202
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
H +A+ + M V+P TFTS+LSACS+ GL+D+GRK A ++ + ++
Sbjct: 203 HFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN 259
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA---CRIHGEIAANY-LFQLEPE 509
++ M R CL +A + ++ LP D V W A++ A + E Y QLE
Sbjct: 260 ALLTMYARCKCLDDAAKIFQR--LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGV 317
Query: 510 HTGYFVLMSNIYAASNKWREVGKLR 534
Y+ S + A ++ VG LR
Sbjct: 318 RPNYYTFASVLLACAS----VGDLR 338
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/647 (35%), Positives = 368/647 (56%), Gaps = 14/647 (2%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
L +G +I Y P A +F + ++ W+ +I A+A++GHC E L + M
Sbjct: 296 LFVGTALITMYARCRSPEDAAQVFGRM--KQTNLITWSAIITAFADHGHCGEALRYFRMM 353
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
++ GI N TF +L + S + E +H I G + ++ ALV++Y +C
Sbjct: 354 QQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESP 413
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV--AS 219
DD VFD++ + +L+SW MI Y Q E+ ++AL LF+ QQ+G+ D V +++ A
Sbjct: 414 DDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGAC 473
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
+G G K VH + +Q S+V MYA+ G ++ A ++ M+++ + +
Sbjct: 474 TIGSHGRTRKL--VHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITA 531
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN ++ GY +G++ EAL + ++Q + VT + +++ACT S G+ H +
Sbjct: 532 WNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 591
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ D ++NA+ +MY+KCG ++ A +F+ + R+ SWN ++ Y HG +
Sbjct: 592 ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSM--PIRSAVSWNGMLQAYAQHGESEEV 649
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVD 458
L+ +M +EGVK + ITF S+LS+CSHAGLI EG + F + ++ + +HY C+VD
Sbjct: 650 LKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVD 709
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LGRAG L EA I +MPL P W +LL ACR+ G++AA L +L+P ++
Sbjct: 710 LLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSA 769
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
V++SNIY+ W+ KLR M ++ +KK S I+ + F D +P E+
Sbjct: 770 SVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEI 829
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
Y KVE + ++ AGY+PD LHDV++E +E +L YHSEKLA+AFG+++ + + +
Sbjct: 830 YDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHI 889
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH+A +FIS I R+I+VRD +RFHHF G+CSC DYW
Sbjct: 890 FKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 238/451 (52%), Gaps = 7/451 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
++ YT G AR +F+ + + WN+MI AY+ + E ++ M++ G
Sbjct: 201 LVNTYTKCGSLTDARKVFDGMPCRSVGT--WNSMISAYSISERSGEAFFIFQRMQQEGER 258
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ TF +L AC + + GK V I T F D +V AL+ MYA+C +D +V
Sbjct: 259 CDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQV 318
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F M +L++W+ +ITA+ EAL F+ QQEG+L + VT +S+ + +
Sbjct: 319 FGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 378
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ +H + + ++N++V +Y RC + + AR VFD +E +LISWNSM+ Y
Sbjct: 379 EELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIY 438
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF-HGYIINSNMKID 346
+Q + +AL LF MQ +P+ V + ++ ACT +GS RK H + S +
Sbjct: 439 VQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGSHGRTRKLVHQCVEESGLGGS 497
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
++ ++++MYAK G+LD AE + ++ E+ +++WNVLI GY +HG R+ALE + ++
Sbjct: 498 PLVQTSLVNMYAKAGELDVAEVILQEM--DEQQITAWNVLINGYALHGRSREALEAYQKL 555
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
E + D +TF S+L+AC+ + + EG+ ++ + + +V + +M + G +
Sbjct: 556 QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSM 615
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
A + MP+ S W +L A HGE
Sbjct: 616 ENARRIFDSMPIRSAVS-WNGMLQAYAQHGE 645
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/532 (28%), Positives = 250/532 (46%), Gaps = 23/532 (4%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L SC LR +H+ G L + ++ Y G A+S+F +
Sbjct: 64 VLNSCGSFRELRDGILVHALSLERGFFQNTL-VATALLNMYGKCGTLLDAQSVFEEMAEK 122
Query: 72 KSYSFLWNTMIRAYANNGHCVE-TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
+ WN M+ Y+ G C + +EL++ M G+ +N TF VL + + +GK
Sbjct: 123 NVVT--WNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+H + + D +V ALV+ Y KCG D KVFD M R + +W MI+AY +E
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+ EA +FQ+ QQEG D VT +S+ A + + V +F DL +
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ MYARC + E A VF M++ +LI+W++++T + +G EAL F MQ P
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP 360
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N VT + L++ T + + H I + T+RNA++++Y +C D A +F
Sbjct: 361 NRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVF 420
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC---SH 427
+ + N+ SWN +I Y AL+ F M ++G++PD + F +IL AC SH
Sbjct: 421 DQLELP--NLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSH 478
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
+C + + L P V+ +V+M +AG L A ++++M + W
Sbjct: 479 GRTRKLVHQCVEE-SGLGGSPLVQ--TSLVNMYAKAGELDVAEVILQEMD-EQQITAWNV 534
Query: 488 LLLACRIHGE----IAANYLFQLE--PEHTGYFVLMSNIYAASNKWREVGKL 533
L+ +HG + A QLE P F+ + N +S E GK+
Sbjct: 535 LINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAE-GKM 585
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 238/476 (50%), Gaps = 17/476 (3%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ G A + F I S WN MI AY++ E L L+ M G++ N+
Sbjct: 2 YSRCGSLGDAVAAFGKIRARNVVS--WNVMISAYSSYKSFQEALALFHAMLLEGVAPNAI 59
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T VL +C S + +G +VH + GF ++ V AL++MY KCG D VF+EM
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 172 SVRDLVSWTVMITAYE-QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+ +++V+W M+ Y Q + A+ LF + EG+ ++ +T ++V ++V + K
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H + D+ + ++V Y +CG++ AR VFD M R + +WNSM++ Y +
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
++ EA +F MQ + + VT L ++ AC + Q G+ I ++ ++D +
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++ MYA+C + A +F + + N+ +W+ +I + HGH +AL +F M +EG
Sbjct: 300 TALITMYARCRSPEDAAQVFGRM--KQTNLITWSAIITAFADHGHCGEALRYFRMMQQEG 357
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
+ P+ +TF S+L+ + ++E + +T+ + +V++ GR +A
Sbjct: 358 ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDAR 417
Query: 471 DMIKQMPLPPNDSVWGALL---LACRIHGEIAANYLFQ------LEPEHTGYFVLM 517
+ Q+ L PN W +++ + C H + A LF+ ++P+ + ++
Sbjct: 418 TVFDQLEL-PNLISWNSMIGIYVQCERHDD--ALQLFRTMQQQGIQPDRVNFMTIL 470
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 197/396 (49%), Gaps = 10/396 (2%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY++CG D F ++ R++VSW VMI+AY + +EAL LF EG+ +++T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
+V+V ++ G ++ VH ++ F ++ + +++ MY +CG + A+ VF+ M
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 274 KRDLISWNSMLTGYIQNGQASE-ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
++++++WN+ML Y G + A+ LF M K N +T L ++++ + + G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
H + S +D + A+++ Y KCG L A +F+ + P R+V +WN +I+ Y +
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM-PC-RSVGTWNSMISAYSI 238
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
+A F +M +EG + D +TF SIL AC + + G+ +++ S + ++
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AANYLFQLEPE- 509
++ M R +A + +M N W A++ A HG A Y ++ E
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHGHCGEALRYFRMMQQEG 357
Query: 510 ---HTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
+ F+ + N + + E+ ++ + GL
Sbjct: 358 ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGL 393
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/595 (38%), Positives = 357/595 (60%), Gaps = 33/595 (5%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L C + EG+ VH +I+T +L +++ L+ +Y KC D VFDEM R+
Sbjct: 249 ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 308
Query: 176 LVSWTVMITAYEQAEKPEEALILF---QKTQQEGLLS------------------DSVTI 214
+VSWT MI+AY Q +AL LF K G+ + + T
Sbjct: 309 VVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTF 368
Query: 215 VSV-ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
+V S LG +L Q +H I + + + + +S++ MYA+ G + +AR VF+ +
Sbjct: 369 ATVLTSCTSSLGFILGRQ-IHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLP 427
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
+RD++S ++++GY Q G EAL LF +Q K N VT +++A + L + LG++
Sbjct: 428 ERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQ 487
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
H +++ S + L+N+++DMY+KCG+L + +F+ ++ ER V SWN ++ GY H
Sbjct: 488 VHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY--ERTVISWNAMLVGYSKH 545
Query: 394 GHGRKALEFFSQMLEE-GVKPDHITFTSILSACSHAGLIDEGRKCFADMT--KLSVKPEV 450
G GR+ L+ F+ M EE VKPD +T ++LS CSH GL D+G F DM+ K+ V+P++
Sbjct: 546 GEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKM 605
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
+HY C+VD+LGR+G + EAF+ IK+MP P ++WG+LL ACR+H GE A L +
Sbjct: 606 EHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLE 665
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
+EP + G +V++SN+YA++ +W +V LR+ M K + K S IE + + FH +DR
Sbjct: 666 IEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDR 725
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P +E+ KV+ ++ K GY+PDLSC LHDV++E +E +L HSEKLA++FG++
Sbjct: 726 SHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIAS 785
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLR+C DCH+ ++IS +Y R++ +RD NRFH GG CSC DYW
Sbjct: 786 PASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 219/439 (49%), Gaps = 33/439 (7%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y+ +L C + R+ +H+ + + + ++ L ++I+ YT A ++F+ +
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYL-PSVFLRTRLIVLYTKCDSLGDAHNVFDEM 304
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELY-------------------STMRRSGISS- 108
S W MI AY+ G+ + L L+ S R + +
Sbjct: 305 PERNVVS--WTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTE 362
Query: 109 -NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N +TF VL +C S+ + G+ +H II+ + +V ++L+DMYAK G+ + V
Sbjct: 363 PNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTV 422
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F+ + RD+VS T +I+ Y Q EEAL LF++ Q EG+ S+ VT V +A+ L +
Sbjct: 423 FECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAAL 482
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ VH + + + + +QNS++ MY++CGN+ +R +FD M +R +ISWN+ML GY
Sbjct: 483 DLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGY 542
Query: 288 IQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
++G+ E L LF M + + KP+ VT L ++S C++ G G + + ++++
Sbjct: 543 SKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVE 602
Query: 347 ATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ + V+D+ + G ++ A + P E + W L+ +H + EF
Sbjct: 603 PKMEHYGCVVDLLGRSGRVEEAFEFIKKM-PFEPTAAIWGSLLGACRVHSNVDIG-EFAG 660
Query: 405 QMLEEGVKPDHITFTSILS 423
Q L E ++P + ILS
Sbjct: 661 QQLLE-IEPGNAGNYVILS 678
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/569 (39%), Positives = 346/569 (60%), Gaps = 11/569 (1%)
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
C + EG+ VH ++ G+ Y+ LV MYA+CG +D V D M R++VSW
Sbjct: 45 CVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSW 104
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV-ASAVGQLG-DVLKAQAVHGYA 237
T MI+ Y Q E+P EA LF + G + T+ SV S G G + + VH +A
Sbjct: 105 TAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFA 164
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
I F + + +S++ MYAR N+++AR VFDM+ RD++S+ ++L+GY + G EAL
Sbjct: 165 IKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEAL 224
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
LF ++ N + N VT +L++A + L S G++ HG I+ + L+N+++DMY
Sbjct: 225 NLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMY 284
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHIT 417
+KCG L + +F+++ ER+V SWN ++ GYG HG + ++ F M ++ VKPD +T
Sbjct: 285 SKCGKLLYSRRVFDNM--PERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDK-VKPDSVT 341
Query: 418 FTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
++L SH GL+DEG F + K S +HY C++D+LGR+G L +A +I++M
Sbjct: 342 LLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKM 401
Query: 477 PLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
P P ++WG+LL ACR+H GE A LF +EPE+ G +V++SNIYAA+ W++V
Sbjct: 402 PFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVF 461
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
+LR+ M K + K S + K I FH+++R +P +++ K+ + IK AG++P
Sbjct: 462 RLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVP 521
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
DLSC LHDV+DE +E ML HSEKLA+ FG+M+ + +QV KNLR+C DCH+ +F+S
Sbjct: 522 DLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVS 581
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+Y R+I +RD NRFH G C+C DYW
Sbjct: 582 KVYGREISLRDKNRFHLITEGACTCGDYW 610
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 211/422 (50%), Gaps = 21/422 (4%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD + C L RQ+H+ + T+G AL+L +++I Y G A ++ + +
Sbjct: 38 YDAAITECVGRRALREGRQVHARMVTAGY-RPALYLATRLVIMYARCGALEDAHNVLDGM 96
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W MI Y+ N E +L+ M R+G N +T VL +C + I +
Sbjct: 97 PERNVVS--WTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQ 154
Query: 129 GKV--VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
++ VH I+ F +V ++L+DMYA+ + +VFD + RD+VS+T +++ Y
Sbjct: 155 HQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGY 214
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ EEAL LF++ EG+ + VT + +A+ L + + VHG + +
Sbjct: 215 TRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFM 274
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+QNS++ MY++CG + +R VFD M +R ++SWN+ML GY ++G A E + LF M +
Sbjct: 275 ALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDK 334
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA-----VMDMYAKCG 361
KP+ VT L ++ ++ G G +I+ K +TL N V+D+ + G
Sbjct: 335 -VKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIV----KEQSTLLNTQHYGCVIDLLGRSG 389
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
L+ A + + P + + W L+ +H + EF +Q L + ++P++ I
Sbjct: 390 QLEKALLLIQKM-PFQPTRAIWGSLLGACRVHANVHVG-EFVAQKLFD-IEPENAGNYVI 446
Query: 422 LS 423
LS
Sbjct: 447 LS 448
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/609 (38%), Positives = 354/609 (58%), Gaps = 45/609 (7%)
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS--SNSYTFPFVLKACASNSLILE 128
D++ F +N ++R + L L+++MR G + + YT+P LK+CA+ ++
Sbjct: 82 DRTTVF-FNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVL 140
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H R G + +V + + MYA+CG+ DD ++F+EM RD+VSW MI+ +
Sbjct: 141 GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAH 200
Query: 189 AEKPEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
A A+ +F++ + D+ T+ S+ ++G+
Sbjct: 201 AGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK------------------------ 236
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
AR ++ + VFD M + LISWN+ML Y N EA+ LF MQ
Sbjct: 237 ---------ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDG 287
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+P+ VT ++ +C + + LG++ H I M L NA+MDMYA CG L A
Sbjct: 288 IEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEAR 347
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
++F+ + R+V SW +I+ YG HGHGR+A++ F +M +G++PD I F +IL+ACSH
Sbjct: 348 DVFDSM--GTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSH 405
Query: 428 AGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL+D G+ F MT + + P+++HYACMVD+LGRAGC+ EA+D I MP+ PN+ VWG
Sbjct: 406 AGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWG 465
Query: 487 ALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
ALL ACRIH G +AA+ L +L P+ TGY+VL+SNIYA + +W +V +R M++KG
Sbjct: 466 ALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKG 525
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+KK S E G + FH D +P K +YKK+ + I+ GY P++ LHDVE
Sbjct: 526 IKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVE 585
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
+ED+E L+ HSEKLA+AF ++N P +++T NLR C+DCH A + IS I R+II++
Sbjct: 586 EEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGREIILK 645
Query: 662 DANRFHHFE 670
D NR H+ +
Sbjct: 646 DVNRIHYMK 654
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/694 (34%), Positives = 380/694 (54%), Gaps = 46/694 (6%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H + +G++ +++G ++ Y + G A+ LF + + S W +++ Y+
Sbjct: 396 QVHGFVVKTGILGD-VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS--WTSLMVGYS 452
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
++G+ E L +Y MR+ G+S N TF V +C + G V G II+ GF
Sbjct: 453 DSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVS 512
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V +L+ M++ ++ C VFD M+ D++SW MI+AY E+L F +
Sbjct: 513 VANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 572
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
++S T+ S+ S + ++ + +HG + ++CI N+++ +Y+ G E A
Sbjct: 573 NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 632
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT------------ 314
LVF M +RDLISWNSM+ Y+Q+G+ + L + E+ KP+ VT
Sbjct: 633 LVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMG-KPDRVTWNALIGGHAENE 691
Query: 315 ----------------------ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
++ ++A L + G++ HG +I + D + NA
Sbjct: 692 EPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNA 751
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
MDMY KCG++ M P R+ SWN+LI+ + HG +KA E F +ML+ G K
Sbjct: 752 AMDMYGKCGEMHDVLKMLP--QPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 809
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PDH+TF S+LSAC+H GL+DEG + MT+ V P ++H C++D+LGR+G L A
Sbjct: 810 PDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEG 869
Query: 472 MIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNK 526
IK+MP+PPND W +LL ACRIHG + A +L +L+P +VL SN+ A S K
Sbjct: 870 FIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGK 929
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W +V LR++M + +KK A S ++ + F ++ +P + K+ + K
Sbjct: 930 WEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKE 989
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
AGY+PD S ALHD+++E +E+ L HSE+LA+AFG++N + +++ KNLRVC DCHS
Sbjct: 990 AGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSV 1049
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++F+S I RKI++RD RFHHF GG CSC DYW
Sbjct: 1050 YKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/508 (27%), Positives = 252/508 (49%), Gaps = 52/508 (10%)
Query: 55 YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
YG AR +F+ + + S W+TM+ Y G E + L+ M G+ N +
Sbjct: 321 YGHMAHARYVFDEMRHRNEAS--WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVA 378
Query: 115 FVLKACA-SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
++ AC+ S + EG VHG +++TG L D YV ALV Y G + K+F+EM
Sbjct: 379 SLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD 438
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
++VSWT ++ Y + P E L ++Q+ +QEG+ + T +V S+ G L D + V
Sbjct: 439 HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQV 498
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
G+ I F + + + NS+++M++ +VE+A VFD M + D+ISWN+M++ Y +G
Sbjct: 499 LGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLC 558
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
E+L F M++ + N T L+S C+ + + + GR HG ++ + + + N +
Sbjct: 559 RESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTL 618
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+ +Y++ G + AE +F + +ER++ SWN ++A Y G L+ +++L+ G KP
Sbjct: 619 LTLYSEAGRSEDAELVFQAM--TERDLISWNSMMACYVQDGKCLDGLKILAELLQMG-KP 675
Query: 414 DHITFTSI----------------------------------LSACSHAGLIDEGRKCFA 439
D +T+ ++ L+A ++ +++EG++
Sbjct: 676 DRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLEEGQQLHG 735
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS--VWGALLLACRIHG- 496
+ KL + ++ +DM G+ G E D++K +P P N S W L+ A HG
Sbjct: 736 LVIKLGFESDLHVTNAAMDMYGKCG---EMHDVLKMLPQPINRSRLSWNILISAFARHGC 792
Query: 497 -EIAANYLFQL-----EPEHTGYFVLMS 518
+ A ++ +P+H + L+S
Sbjct: 793 FQKARETFHEMLKLGPKPDHVTFVSLLS 820
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 108/566 (19%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
RL PS Y ++L+ C + +Q IH+ L T+G LHL K+II Y G+
Sbjct: 27 RLDPS---LYLKILQLCIDKKAKKQGHLIHTHLITNGF-GSDLHLNTKLIIFYVKVGDVI 82
Query: 60 TARS-------------------------------LFNSIHN------------------ 70
AR+ LF+ + +
Sbjct: 83 AARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANHALVDFHSKCGK 142
Query: 71 --DKSYSF---------LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
D SY F WN MI YA G ++ ++ +M R G+ + YT VL+A
Sbjct: 143 MEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRA 202
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
A ++ +HG I + G+ S V L++ YAK G + M +DL S
Sbjct: 203 SAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSS 262
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
T +IT Y EG+ + ++ + + G++ D + A
Sbjct: 263 TALITGY----------------AHEGIYTMGNALIDMYAKSGEIEDAKR-------AFD 299
Query: 240 NAFLEDLCIQNSIVAMYAR--CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
+++ S+++ YA+ G++ AR VFD M R+ SW++ML+GY++ G EA+
Sbjct: 300 EMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAV 359
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLG-SRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
LF +M +PN L++AC+ G G + HG+++ + + D + A++
Sbjct: 360 GLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHF 419
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y G + A+ +F ++ + NV SW L+ GY G+ + L + +M +EGV +
Sbjct: 420 YGSIGLVYNAQKLFEEM--PDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQN 477
Query: 417 TFTSILSACSHAGLIDE---GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---F 470
TF ++ S+C GL+++ G + + + + V ++ M + EA F
Sbjct: 478 TFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVF 534
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHG 496
D + + + W A++ A HG
Sbjct: 535 DHMNECDIIS----WNAMISAYAHHG 556
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 200/491 (40%), Gaps = 126/491 (25%)
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I++ N G E L+L S+ + + + +L+ C +G ++H +I GF
Sbjct: 5 IQSACNLGRLAEALKLLSS---NPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGF 61
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
SD ++ L+ Y K G VFD M R +VSWT M++ Y Q + E+A +LF
Sbjct: 62 GSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSD 121
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G+ ++ +++V +++CG
Sbjct: 122 MRHCGVKAN---------------------------------------HALVDFHSKCGK 142
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+E A +F M +RD++SWN+M+ GY G A ++ +F M P+ T ++ A
Sbjct: 143 MEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRA 202
Query: 322 CTYLGSRQLGRKFHG---------YIINSNMKIDA------------------------- 347
G + + HG Y I + + I+A
Sbjct: 203 SAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSS 262
Query: 348 -------------TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
T+ NA++DMYAK G+++ A+ F+++ E+NV SW LI+GY HG
Sbjct: 263 TALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEM--EEKNVISWTSLISGYAKHG 320
Query: 395 HG---------------------------------RKALEFFSQMLEEGVKPDHITFTSI 421
+G +A+ F QM GV+P+ S+
Sbjct: 321 YGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASL 380
Query: 422 LSACSHAG-LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
++ACS +G + DEG + + K + +V +V G G +Y A + ++MP
Sbjct: 381 ITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DH 439
Query: 481 NDSVWGALLLA 491
N W +L++
Sbjct: 440 NVVSWTSLMVG 450
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/613 (37%), Positives = 355/613 (57%), Gaps = 12/613 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN---SLILEGKVVHG 134
WNTMI +YA N +E + + + R G+ + +T VL+AC++ G VH
Sbjct: 963 WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHV 1022
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
I+ G ++DS+V AL+D+Y+K G+ D+ + DL SW ++ Y ++ K +
Sbjct: 1023 YAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRK 1082
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL F + G+ D +T+ + A G L ++ + + + YAI F DL + + ++
Sbjct: 1083 ALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLD 1142
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY +CG++ A +F + + D ++W +M++GYI+NG AL ++ M+ S +P+ T
Sbjct: 1143 MYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYT 1202
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
L+ A + L + + G++ H ++ + +D + +++DMY KCG + A +F +
Sbjct: 1203 FATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM- 1261
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
R V WN ++ G HGH +AL F M G++PD +TF +LSACSH+GL E
Sbjct: 1262 -DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEA 1320
Query: 435 RKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
K F M K + PE++HY+C+VD LGRAG + EA ++I MP + S++ ALL ACR
Sbjct: 1321 YKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACR 1380
Query: 494 IHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
G+ A+ L L+P + +VL+SNIYAAS +W +V R MK K +KK F
Sbjct: 1381 TKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGF 1440
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG-YMPDLSCALHDVEDEDREH 607
S I+ + F DR +P +Y+K+E + I+ G Y+PD L DVE+E++E
Sbjct: 1441 SWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKER 1500
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
L YHSEKLA+AFG+++ P A ++V KNLRVC DCHSA + IS + +R+I++RDANRFH
Sbjct: 1501 ALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFH 1560
Query: 668 HFEGGTCSCNDYW 680
HF GTCSC DYW
Sbjct: 1561 HFRNGTCSCGDYW 1573
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 33/451 (7%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
L + ++ Y YG AR LF+ + + + LWN M++AY N E L +S
Sbjct: 752 LFVSGALVNIYCKYGLVGQARLLFDKM--PERDAVLWNVMLKAYVENSFQDEALRFFSAF 809
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
RSG + V+ NS + + H + V+A + M+
Sbjct: 810 HRSGFXPDFSNLHCVIGGV--NSDVSNNRKRHAE----------QVKAYAMKMFP----F 853
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
D G +F +W +T + A + A+ F+ + + DSVT+V + SA
Sbjct: 854 DQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA 904
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
D+ + +H I ++F + + NS++ MY++ G V A F + DLISWN
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ---LGRKFHGYI 338
+M++ Y QN EA+ F ++ KP+ T ++ AC+ + LG + H Y
Sbjct: 965 TMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYA 1024
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
I + D+ + A++D+Y+K G +D AE + + + + +++SWN ++ GY RK
Sbjct: 1025 IKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY--DFDLASWNAIMFGYIKSNKSRK 1082
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
ALE FS M E G+ D IT + + A + +G++ A KL ++ + ++D
Sbjct: 1083 ALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLD 1142
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
M + G + A ++ ++ P++ W ++
Sbjct: 1143 MYIKCGDMPNALELFGEIS-RPDEVAWTTMI 1172
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 184/382 (48%), Gaps = 5/382 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H G+IN + + +I Y+ G+ + A L + ++ S WN ++ Y
Sbjct: 1019 QVHVYAIKCGIINDSF-VSTALIDLYSKGGKMDEAEFLLHGKYDFDLAS--WNAIMFGYI 1075
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+ + LE +S M GI + T +KA + +GK + I+ GF +D +
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLW 1135
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V + ++DMY KCG + ++F E+S D V+WT MI+ Y + + AL ++ + G
Sbjct: 1136 VSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSG 1195
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ D T ++ A L + + + +H + + D + S+V MY +CG+V+ A
Sbjct: 1196 VQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAY 1255
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VF M+ R ++ WN+ML G Q+G EAL LF MQ++ +P+ VT + ++SAC++ G
Sbjct: 1256 RVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSG 1315
Query: 327 SRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
K+ + + + + + ++D + G + AEN+ + P + + S +
Sbjct: 1316 LFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASM-PFKASASMYRA 1374
Query: 386 LIAGYGMHGHGRKALEFFSQML 407
L+ G A ++L
Sbjct: 1375 LLGACRTKGDAETAKRVADKLL 1396
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 188/414 (45%), Gaps = 38/414 (9%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++ H+ + TSG + +L +I Y+ G +AR +F+ +D+ WN+++ AY
Sbjct: 631 KRAHARIVTSGDLPDR-YLTNNLITMYSKCGSLCSARQVFDK-SSDRDL-VTWNSILAAY 687
Query: 86 ANNG-----HCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
A + +E L+ +R G S T +LK C + + + VHG ++ G
Sbjct: 688 AQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIG 747
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F D +V ALV++Y K G +FD+M RD V W VM+ AY + +EAL F
Sbjct: 748 FELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFS 807
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ G D + V V DV + H + A+
Sbjct: 808 AFHRSGFXPDFSNLHCVIGGVNS--DVSNNRKRHAEQV-KAY------------------ 846
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
A +F + ++ +WN LT ++ GQ A+ F + S + VT +I++S
Sbjct: 847 ----AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILS 902
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
A LG + H +I S+ + N++M+MY+K G + AE F I+ E ++
Sbjct: 903 AAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF--INSPELDL 960
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
SWN +I+ Y + +A+ F +L +G+KPD T S+L ACS DEG
Sbjct: 961 ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG 1011
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 153/347 (44%), Gaps = 34/347 (9%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK H I+ +G L D Y+ L+ MY+KCG +VFD+ S RDLV+W ++ AY Q
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 189 -----AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
E E LF ++ G +T+ + G V ++ VHGYA+ F
Sbjct: 690 FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFE 749
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
DL + ++V +Y + G V +ARL+FD M +RD + WN ML Y++N EAL F
Sbjct: 750 LDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAF 809
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA-KCGD 362
S P+ ++ +NS++ + + YA K
Sbjct: 810 HRSGFXPDFSNLHCVIGG-----------------VNSDVSNNRKRHAEQVKAYAMKMFP 852
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
D N+F +WN + + G A++ F +L + D +T IL
Sbjct: 853 FDQGSNIF-----------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
SA A +D G + A + K S P V +++M +AG +Y A
Sbjct: 902 SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAA 948
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/642 (38%), Positives = 368/642 (57%), Gaps = 32/642 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGI 106
+I + +G + AR F+ + S WN M+ AY NG E L+ S I
Sbjct: 137 MISSHANHGLVSLARHYFDLAPEKDAVS--WNGMLAAYVRNGRVEEARGLFNSRTEWDAI 194
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
S N+ +V S + L ++ D++ + V YA+ G + +
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM---------VSGYARRGDMVEARR 245
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD VRD+ +WT +++ Y Q EEA +F + ++V+ ++ +A Q
Sbjct: 246 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRM 301
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ +A+ + C ++ N+++ YA+ G +E+A+ VFD M ++D +SW +ML
Sbjct: 302 MDEAKELFNMMPC----RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y Q G + E L LF EM N ++S C + + + G + HG +I + +
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA++ MY KCG+++ A N F ++ ER+V SWN +IAGY HG G++ALE F M
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEME--ERDVVSWNTMIAGYARHGFGKEALEIFDMM 475
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLGRA 463
KPD IT +L+ACSH+GL+++G F M ++ KPE HY CM+D+LGRA
Sbjct: 476 RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE--HYTCMIDLLGRA 533
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L EA D++K MP P+ ++WGALL A RIH G AA +F+LEPE+ G +VL+S
Sbjct: 534 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLS 593
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA+S KWR+ K+R M+ +G+KK FS IE + F D V+P +++Y +E
Sbjct: 594 NIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLE 653
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ + +K AGY+ LHDVE+E++EHML YHSEKLAVA+GI+N+ P ++V KNLR
Sbjct: 654 DLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLR 713
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH+AF++IS I R I++RD+NRFHHF GG+CSC DYW
Sbjct: 714 VCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 168/398 (42%), Gaps = 65/398 (16%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N I A+ G + L++ M R S T+ +L ++N + + + R
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTS----TYNAMLAGYSANGRL----PLAASLFR 93
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
D+Y L+ A D +FDEM VRD V++ VMI+++
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSH------------ 141
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
GL+S + +A +D N ++A Y R
Sbjct: 142 ----ANHGLVSLARHYFDLAPE-----------------------KDAVSWNGMLAAYVR 174
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G VE+AR +F+ + D ISWN++++GY+Q G+ SEA LFD M D V+ I+
Sbjct: 175 NGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDV----VSWNIM 230
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
VS G R+ + ++ D AV+ YA+ G L+ A +F+ + ER
Sbjct: 231 VSGYARRGDMVEARR----LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM--PER 284
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
N SWN ++A Y +A E F+ M V ++ ++L+ + AG+++E + F
Sbjct: 285 NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVA----SWNTMLTGYAQAGMLEEAKAVF 340
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
M + + +A M+ + GC E + +M
Sbjct: 341 DTMP----QKDAVSWAAMLAAYSQGGCSEETLQLFIEM 374
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 33/343 (9%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ + + G+ D ++F M R ++ M+ Y + A LF+ + S +
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYN 104
Query: 212 VTI--VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
+ ++V+S++ + V D N +++ +A G V AR F
Sbjct: 105 TLLHALAVSSSLADARGLFDEMPV----------RDSVTYNVMISSHANHGLVSLARHYF 154
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D+ ++D +SWN ML Y++NG+ EA LF NS + + ++ L+S G
Sbjct: 155 DLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDAISWNALMSGYVQWGKMS 210
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
R+ + D N ++ YA+ GD+ A +F D P R+V +W +++G
Sbjct: 211 EARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLF-DAAPV-RDVFTWTAVVSG 264
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
Y +G +A F M E + +++ ++++A ++DE ++ F M +
Sbjct: 265 YAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN---- 316
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA 491
V + M+ +AG L EA + M P D+V W A+L A
Sbjct: 317 VASWNTMLTGYAQAGMLEEAKAVFDTM--PQKDAVSWAAMLAA 357
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 115/298 (38%), Gaps = 73/298 (24%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ----------------- 292
N + + R G V A +F M +R ++N+ML GY NG+
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101
Query: 293 --------------ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY- 337
++A LFDEM D VT +++S+ G L R +
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDS----VTYNVMISSHANHGLVSLARHYFDLA 157
Query: 338 --------------------------IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+ NS + DA NA+M Y + G + A +F+
Sbjct: 158 PEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFD 217
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ R+V SWN++++GY G +A F + D T+T+++S + G++
Sbjct: 218 RM--PGRDVVSWNIMVSGYARRGDMVEARRLF----DAAPVRDVFTWTAVVSGYAQNGML 271
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+E R+ F M + + + MV + + EA ++ MP N + W +L
Sbjct: 272 EEARRVFDAMPERN----AVSWNAMVAAYIQRRMMDEAKELFNMMPC-RNVASWNTML 324
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/613 (37%), Positives = 355/613 (57%), Gaps = 12/613 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN---SLILEGKVVHG 134
WNTMI +YA N +E + + + R G+ + +T VL+AC++ G VH
Sbjct: 963 WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHV 1022
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
I+ G ++DS+V AL+D+Y+K G+ D+ + DL SW ++ Y ++ K +
Sbjct: 1023 YAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRK 1082
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL F + G+ D +T+ + A G L ++ + + + YAI F DL + + ++
Sbjct: 1083 ALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLD 1142
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY +CG++ A +F + + D ++W +M++GYI+NG AL ++ M+ S +P+ T
Sbjct: 1143 MYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYT 1202
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
L+ A + L + + G++ H ++ + +D + +++DMY KCG + A +F +
Sbjct: 1203 FATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKM- 1261
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
R V WN ++ G HGH +AL F M G++PD +TF +LSACSH+GL E
Sbjct: 1262 -DVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEA 1320
Query: 435 RKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
K F M K + PE++HY+C+VD LGRAG + EA ++I MP + S++ ALL ACR
Sbjct: 1321 YKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACR 1380
Query: 494 IHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
G+ A+ L L+P + +VL+SNIYAAS +W +V R MK K +KK F
Sbjct: 1381 TKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGF 1440
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG-YMPDLSCALHDVEDEDREH 607
S I+ + F DR +P +Y+K+E + I+ G Y+PD L DVE+E++E
Sbjct: 1441 SWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKER 1500
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
L YHSEKLA+AFG+++ P A ++V KNLRVC DCHSA + IS + +R+I++RDANRFH
Sbjct: 1501 ALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFH 1560
Query: 668 HFEGGTCSCNDYW 680
HF GTCSC DYW
Sbjct: 1561 HFRNGTCSCGDYW 1573
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 33/451 (7%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
L + ++ Y YG AR LF+ + + + LWN M++AY N E L +S
Sbjct: 752 LFVSGALVNIYCKYGLVGQARLLFDKM--PERDAVLWNVMLKAYVENSFQDEALRFFSAF 809
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
RSG + V+ NS + + H + V+A + M+
Sbjct: 810 HRSGFFPDFSNLHCVIGGV--NSDVSNNRKRHAE----------QVKAYAMKMFP----F 853
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
D G +F +W +T + A + A+ F+ + + DSVT+V + SA
Sbjct: 854 DQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAA 904
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
D+ + +H I ++F + + NS++ MY++ G V A F + DLISWN
Sbjct: 905 VGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWN 964
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ---LGRKFHGYI 338
+M++ Y QN EA+ F ++ KP+ T ++ AC+ + LG + H Y
Sbjct: 965 TMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYA 1024
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
I + D+ + A++D+Y+K G +D AE + + + + +++SWN ++ GY RK
Sbjct: 1025 IKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY--DFDLASWNAIMFGYIKSNKSRK 1082
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
ALE FS M E G+ D IT + + A + +G++ A KL ++ + ++D
Sbjct: 1083 ALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLD 1142
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
M + G + A ++ ++ P++ W ++
Sbjct: 1143 MYIKCGDMPNALELFGEIS-RPDEVAWTTMI 1172
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 184/382 (48%), Gaps = 5/382 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H G+IN + + +I Y+ G+ + A L + ++ S WN ++ Y
Sbjct: 1019 QVHVYAIKCGIINDSF-VSTALIDLYSKGGKMDEAEFLLHGKYDFDLAS--WNAIMFGYI 1075
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+ + LE +S M GI + T +KA + +GK + I+ GF +D +
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLW 1135
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V + ++DMY KCG + ++F E+S D V+WT MI+ Y + + AL ++ + G
Sbjct: 1136 VSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSG 1195
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ D T ++ A L + + + +H + + D + S+V MY +CG+V+ A
Sbjct: 1196 VQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAY 1255
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VF M+ R ++ WN+ML G Q+G EAL LF MQ++ +P+ VT + ++SAC++ G
Sbjct: 1256 RVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSG 1315
Query: 327 SRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
K+ + + + + + ++D + G + AEN+ + P + + S +
Sbjct: 1316 LFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASM-PFKASASMYRA 1374
Query: 386 LIAGYGMHGHGRKALEFFSQML 407
L+ G A ++L
Sbjct: 1375 LLGACRTKGDAETAKRVADKLL 1396
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 188/414 (45%), Gaps = 38/414 (9%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++ H+ + TSG + +L +I Y+ G +AR +F+ +D+ WN+++ AY
Sbjct: 631 KRAHARIVTSGDLPDR-YLTNNLITMYSKCGSLCSARQVFDK-SSDRDL-VTWNSILAAY 687
Query: 86 ANNG-----HCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
A + +E L+ +R G S T +LK C + + + VHG ++ G
Sbjct: 688 AQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIG 747
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F D +V ALV++Y K G +FD+M RD V W VM+ AY + +EAL F
Sbjct: 748 FELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFS 807
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ G D + V V DV + H + A+
Sbjct: 808 AFHRSGFFPDFSNLHCVIGGVNS--DVSNNRKRHAEQV-KAY------------------ 846
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
A +F + ++ +WN LT ++ GQ A+ F + S + VT +I++S
Sbjct: 847 ----AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILS 902
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
A LG + H +I S+ + N++M+MY+K G + AE F I+ E ++
Sbjct: 903 AAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF--INSPELDL 960
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
SWN +I+ Y + +A+ F +L +G+KPD T S+L ACS DEG
Sbjct: 961 ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEG 1011
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 153/347 (44%), Gaps = 34/347 (9%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK H I+ +G L D Y+ L+ MY+KCG +VFD+ S RDLV+W ++ AY Q
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ 689
Query: 189 -----AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
E E LF ++ G +T+ + G V ++ VHGYA+ F
Sbjct: 690 FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFE 749
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
DL + ++V +Y + G V +ARL+FD M +RD + WN ML Y++N EAL F
Sbjct: 750 LDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAF 809
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA-KCGD 362
S P+ ++ +NS++ + + YA K
Sbjct: 810 HRSGFFPDFSNLHCVIGG-----------------VNSDVSNNRKRHAEQVKAYAMKMFP 852
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
D N+F +WN + + G A++ F +L + D +T IL
Sbjct: 853 FDQGSNIF-----------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
SA A +D G + A + K S P V +++M +AG +Y A
Sbjct: 902 SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAA 948
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/701 (37%), Positives = 400/701 (57%), Gaps = 30/701 (4%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
R+ P+ F LK+C+ LA R IH +GL L + ++ Y
Sbjct: 5 RVAPNNYTF-PFALKACSALADHHCGRAIHRHAIHAGL-QADLFVSTALLDMYVKCACLP 62
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNG---HCVETLELYSTMRRSGISSNSYTFPFV 116
A +F ++ + WN M+ YA++G H V L L M+ + N+ T +
Sbjct: 63 DAAHIFATMPARDLVA--WNAMLAGYAHHGMYHHAVAHL-LSMQMQMHRLRPNASTLVAL 119
Query: 117 LKACASNSLILEGKVVHGDIIRTGF---------LSDS-YVQAALVDMYAKCGQTDDGCK 166
L A + +G VH IR L+D + AL+DMYAKCG +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT-IVSVASAVGQLG 225
VFD M R+ V+W+ +I + + +A +LF+ +GL S T I S A L
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + +H + DL NS+++MYA+ G +++A +FD M +D +S++++++
Sbjct: 240 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 299
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY+QNG+A EA L+F +MQ + +P+ T + L+ AC++L + Q GR HG +I +
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 359
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ ++ NA++DMYAKCG +D + +FN + PS R++ SWN +IAGYG+HG G++A F +
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFN-MMPS-RDIVSWNTMIAGYGIHGLGKEATALFLE 417
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M G PD +TF +LSACSH+GL+ EG+ F M + P ++HY CMVD+L R G
Sbjct: 418 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG 477
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA++ I+ MPL + VW ALL ACR++ G+ + + +L PE TG FVL+SN
Sbjct: 478 FLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 537
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+A+ ++ E ++R K +G KK S IE + F D+ +P E+Y+++++
Sbjct: 538 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 597
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ V IK GY PD S L D+E+E++E L HSEKLA+A+GI++L+ + + VTKNLRV
Sbjct: 598 ILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRV 657
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+ + IS + RR IIVRDANRFHHF+ G CSC D+W
Sbjct: 658 CGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 216/436 (49%), Gaps = 31/436 (7%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M R ++ N+YTFPF LKAC++ + G+ +H I G +D +V AL+DMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL--ILFQKTQQEGLLSDSVTIVSVA 218
D +F M RDLV+W M+ Y A+ +L + Q L ++ T+V++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 219 SAVGQLGDVLKAQAVHGYAI--C--------NAFLEDLCIQNSIVAMYARCGNVEKARLV 268
+ Q G + + +VH Y I C + + + + +++ MYA+CG++ AR V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGS 327
FD M R+ ++W++++ G++ + ++A LLF M C +P + + AC L
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
++G + H + S + D T N+++ MYAK G +D A +F+++ + ++ S++ L+
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM--AVKDTVSYSALV 298
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
+GY +G +A F +M V+PD T S++ ACSH + GR + +
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLA 358
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQM--PLPPNDSV-WGALLLACRIHGEIAANYLF 504
E ++DM + G D+ +Q+ +P D V W ++ IHG
Sbjct: 359 SETSICNALIDMYAKCG----RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG-------- 406
Query: 505 QLEPEHTGYFVLMSNI 520
L E T F+ M+N+
Sbjct: 407 -LGKEATALFLEMNNL 421
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/676 (35%), Positives = 375/676 (55%), Gaps = 16/676 (2%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGL-INQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
+LK C SLR+ +H+ SG I++ LG ++ Y+ G A +F I N
Sbjct: 57 VLKGCANTGSLREGKVLHALALRSGCEIDE--FLGCSLVDMYSKCGTVYDALKVFTKIRN 114
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
+ W+ MI GH E EL+ MRR G N +T ++ + + G+
Sbjct: 115 PDVVA--WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQ 172
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+HG I + GF SD+ V L+ MY K +DG KVF+ M+ DLVSW +++ + ++
Sbjct: 173 SIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQ 232
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+F + EG + T +SV + L D + VH + I N+ +D +
Sbjct: 233 TCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGT 292
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MYA+ +E A + FD + RD+ SW +++GY Q QA +A+ F +MQ KP
Sbjct: 293 ALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKP 352
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N T +S C+++ + + GR+ H + + D + +A++D+Y KCG ++ AE +F
Sbjct: 353 NEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIF 412
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ R++ SWN +I+GY HG G KALE F ML EG+ PD TF +LSACS GL
Sbjct: 413 KGL--ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGL 470
Query: 431 IDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++EG+K F M+K+ + P ++HYACMVD+LGRAG E I++M L P +W +L
Sbjct: 471 VEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVL 530
Query: 490 LACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
AC++HG E AA LF++EP ++L+SNI+A+ +W +V +R M ++G+KK
Sbjct: 531 GACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKK 590
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S +E + F + D +P +E+Y K++ + + GY+P LH+V +++
Sbjct: 591 EPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKE 650
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+ L YHSE+LA++F +++ +++ KNLR+C DCH + IS I ++I+VRD
Sbjct: 651 KMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIR 710
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF+ GTCSC D W
Sbjct: 711 RFHHFKRGTCSCQDRW 726
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 220/420 (52%), Gaps = 3/420 (0%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN ++ YA G + L+L+ M+ + +T VLK CA+ + EGKV+H +
Sbjct: 19 WNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALAL 78
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R+G D ++ +LVDMY+KCG D KVF ++ D+V+W+ MIT +Q +EA
Sbjct: 79 RSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAE 138
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF +++G + T+ S+ S +GD+ Q++HG F D + N ++ MY
Sbjct: 139 LFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYM 198
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+ VE VF+ M DL+SWN++L+G+ + +F +M KPN T +
Sbjct: 199 KSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFIS 258
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ +C+ L + G++ H +II ++ D + A++DMYAK L+ A F+ +
Sbjct: 259 VLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRL--VN 316
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
R++ SW V+I+GY KA+++F QM EG+KP+ T S LS CSH ++ GR+
Sbjct: 317 RDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQL 376
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
A K ++ + +VD+ G+ GC+ A + K + + + W ++ HG+
Sbjct: 377 HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-ISRDIVSWNTIISGYSQHGQ 435
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 147/304 (48%), Gaps = 2/304 (0%)
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
++F M ++ VSW ++ Y Q ++ L LF K ++ T+ +V G
Sbjct: 6 RLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTG 65
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + + +H A+ + D + S+V MY++CG V A VF + D+++W++M+T
Sbjct: 66 SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMIT 125
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
G Q G EA LF M+ +PN T LVS T +G + G+ HG I +
Sbjct: 126 GLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFES 185
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + N ++ MY K ++ +F + + ++ SWN L++G+ + F Q
Sbjct: 186 DNLVSNPLIMMYMKSRCVEDGNKVFEAM--TNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
ML EG KP+ TF S+L +CS + G++ A + K S + +VDM +A C
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 466 LYEA 469
L +A
Sbjct: 304 LEDA 307
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 4/224 (1%)
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
RL F M EK +SWN++L GY Q G + L LF +M+ + K + T ++ C
Sbjct: 6 RLFFGMPEKNG-VSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANT 64
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
GS + G+ H + S +ID L +++DMY+KCG + A +F I + V +W+
Sbjct: 65 GSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPD--VVAWSA 122
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+I G GHG++A E F M +G +P+ T +S++S ++ G + G+ + K
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ + ++ M ++ C+ + + + M P+ W ALL
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMT-NPDLVSWNALL 225
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/655 (36%), Positives = 374/655 (57%), Gaps = 49/655 (7%)
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
LFN+IH + + W ++IR Y ++G ++L + M SG+ + FP VLK+CA
Sbjct: 62 LFNTIHFPPALA--WKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALL 119
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK------CGQTDDGC-KVFDEMSVR-- 174
+ G+ +HG IIR G D Y AL++MY+K G+ G +VFDEM+ R
Sbjct: 120 MDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTR 179
Query: 175 -----------------------DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
DLVSW +I + EE L + ++ L DS
Sbjct: 180 SVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDS 239
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
T+ SV + + D+ + + +HG +I D+ + +S++ MYA+C V + VF +
Sbjct: 240 FTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTL 299
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ +RD ISWNS++ G +QNG E L F +M + KP + ++ AC +L + LG
Sbjct: 300 LTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 359
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ HGYI + + + ++++DMYAKCG++ TA+ +F+ + R++ SW +I G
Sbjct: 360 KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRL--RDMVSWTAMIMGCA 417
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEV 450
+HG A+E F QM EG+K ++L+ACSH GL+DE K F MT+ + P V
Sbjct: 418 LHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGV 470
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
+HYA + D+LGRAG L EA+D I M + P S+W LL ACR+H E AN + +
Sbjct: 471 EHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILE 530
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
++P +TG ++L++NIY+A+ +W+E K R M+ G++K A S IE + F D
Sbjct: 531 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 590
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P ++++ + +E + ++ GY+PD S HDVE+E +++++ HSE+LA+ FGI+N
Sbjct: 591 SHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINT 650
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++VTKNLRVC DCH+A +FIS I R+I+VRD +RFHHF+ GTCSC DYW
Sbjct: 651 PAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/680 (35%), Positives = 386/680 (56%), Gaps = 19/680 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ +LK+C ++ + ++IH+ + G + +G +I Y G+ + AR LF+ +
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGF-ESDVDVGNALITMYVKCGDISNARMLFDKM 259
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WN MI Y NG +E LEL+S MR + + T V AC
Sbjct: 260 PKRDRIS--WNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERL 317
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ VHG ++++ F D + +L+ MY+ G+ ++ VF M +D+VSWT MI +
Sbjct: 318 GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ P +A+ ++ + EG+L D +T+VSV SA +G + +H AI + + +
Sbjct: 378 HKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIV 437
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
NS++ MY++C V+ A VF + ++++SW S++ G N ++ EALL F +M+ S
Sbjct: 438 SNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-M 496
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KPN VT + ++SAC +G+ G++ H + + + + D L NA++DMY +CG A N
Sbjct: 497 KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALN 556
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
FN +++V++WN+L+ GY G + A+E F +MLE + PD ITF S+L ACS +
Sbjct: 557 QFNS---QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613
Query: 429 GLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
G++ EG + F M K ++ P +KHYAC+VD+LGRAG L +A+D I+ MP+ P+ ++WGA
Sbjct: 614 GMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGA 673
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACRIH GEIAA +F+ + + GY++L+ N+YA W +V K+R M+ +GL
Sbjct: 674 LLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
S +E + F + D + KE+ ++ ++K G+ +L + +
Sbjct: 734 SADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF-GNLKSSFTSEIE 792
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
R + HSE+ A+AFG++N P + VTKNL +C+ CH+ +FIS I RR+I VRD
Sbjct: 793 SSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRD 852
Query: 663 ANRFHHFEGGTCSCND--YW 680
+HHF+ G CSC D YW
Sbjct: 853 VEEYHHFKDGVCSCGDEGYW 872
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/513 (30%), Positives = 250/513 (48%), Gaps = 47/513 (9%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
+ LG ++ + +G A +F + +S WN ++ YA G E L LY M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFS--WNVLVGGYAKAGCFDEALNLYHRM 189
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
+ I N YTFP VLK CA S I GK +H +IR GF SD V AL+ MY KCG
Sbjct: 190 LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
+ +FD+M RD +SW MI+ Y + E L LF ++ + D +T+ +VASA
Sbjct: 250 SNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L + + VHGY + + F D+ + NS++ MY+ G +E+A VF ME +D++SW
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ + + +A+ + M+ P+ +T + ++SAC +G LG + H I +
Sbjct: 370 AMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT 429
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + N+++DMY+KC +D A +F +I S +NV SW LI G ++ +AL
Sbjct: 430 GLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI--SGKNVVSWTSLILGLRINNRSFEALL 487
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV--------------- 446
FF QM +E +KP+ +T S+LSAC+ G + G++ A + V
Sbjct: 488 FFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYV 546
Query: 447 ---------------KPEVKHYACMVD---MLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
K +V + ++ G+A E FD + ++ + P++ + +L
Sbjct: 547 RCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISL 606
Query: 489 LLACRIHGEIAANYLFQLEPEHTGYFVLMSNIY 521
L AC G + E YF +M N Y
Sbjct: 607 LCACSKSGMVT---------EGLEYFNIMKNKY 630
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ L+ C + + G + + + +S + L NA++ M+ + G+L A +F +
Sbjct: 101 IALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKM-- 158
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
SER+V SWNVL+ GY G +AL + +ML ++P+ TF S+L C+ I G+
Sbjct: 159 SERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGK 218
Query: 436 KCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ A + + + +V ++ M + G + A + +MP S W A++
Sbjct: 219 EIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRIS-WNAMI 271
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 244/681 (35%), Positives = 391/681 (57%), Gaps = 23/681 (3%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL+SC LR+ +H+ L SG + L +I Y+ + +A LF ++
Sbjct: 26 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRR 85
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ S W T++ + N + L ++ MRR+G++ + +A A+ L G
Sbjct: 86 NAVS--WTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 143
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +R GF ++ +V + L DMY+KCG + C+VFD+M +D V+WT MI Y +
Sbjct: 144 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 203
Query: 192 PEEALILFQKTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
E A++ F+ ++EGL+ +D SV SA G L D ++++H F ++ ++N
Sbjct: 204 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 263
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWN-----SMLTGYIQNGQASEALLLFDEMQN 305
+++ MYA+ +VE A V K D WN SM+ GYI+ EAL+++ E++
Sbjct: 264 ALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 319
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+PN T ++ C + G + H +I +++ D+ + + ++DMY KCG +
Sbjct: 320 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISL 379
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
+ +FN+I R +WN +I + HGHGR+A++ F +M+ G++P+HI F S+L+AC
Sbjct: 380 SMQLFNEIE--YRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 437
Query: 426 SHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SHAGL+DEG K F M + ++P+ +HY+C++D GRAG L EA+ I +MP+ PN
Sbjct: 438 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 497
Query: 485 WGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W +LL ACR+ G E+AA L +LEP +TG V +S IYA+ +W +V +R+ M++
Sbjct: 498 WCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRD 557
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
+KK FS ++ K F + D +P K++Y+K+E + IK GY+PD S +
Sbjct: 558 SRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCN 617
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
+ED +E +L YHSE++AVAF ++++ + V KNLR+C DCH+AF+FI + RR II
Sbjct: 618 LEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDII 677
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRD +RFHHF G CSC DYW
Sbjct: 678 VRDNSRFHHFVNGRCSCGDYW 698
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/701 (37%), Positives = 400/701 (57%), Gaps = 30/701 (4%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
R+ P+ F LK+C+ LA R IH +GL L + ++ Y
Sbjct: 120 RVAPNNYTF-PFALKACSALADHHCGRAIHRHAIHAGL-QADLFVSTALLDMYVKCACLP 177
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNG---HCVETLELYSTMRRSGISSNSYTFPFV 116
A +F ++ + WN M+ YA++G H V L L M+ + N+ T +
Sbjct: 178 DAAHIFATMPARDLVA--WNAMLAGYAHHGMYHHAVAHL-LSMQMQMHRLRPNASTLVAL 234
Query: 117 LKACASNSLILEGKVVHGDIIRTGF---------LSDS-YVQAALVDMYAKCGQTDDGCK 166
L A + +G VH IR L+D + AL+DMYAKCG +
Sbjct: 235 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 294
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT-IVSVASAVGQLG 225
VFD M R+ V+W+ +I + + +A +LF+ +GL S T I S A L
Sbjct: 295 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 354
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + +H + DL NS+++MYA+ G +++A +FD M +D +S++++++
Sbjct: 355 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 414
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY+QNG+A EA L+F +MQ + +P+ T + L+ AC++L + Q GR HG +I +
Sbjct: 415 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 474
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ ++ NA++DMYAKCG +D + +FN + PS R++ SWN +IAGYG+HG G++A F +
Sbjct: 475 ETSICNALIDMYAKCGRIDLSRQVFN-MMPS-RDIVSWNTMIAGYGIHGLGKEATALFLE 532
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M G PD +TF +LSACSH+GL+ EG+ F M + P ++HY CMVD+L R G
Sbjct: 533 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG 592
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA++ I+ MPL + VW ALL ACR++ G+ + + +L PE TG FVL+SN
Sbjct: 593 FLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 652
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+A+ ++ E ++R K +G KK S IE + F D+ +P E+Y+++++
Sbjct: 653 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 712
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ V IK GY PD S L D+E+E++E L HSEKLA+A+GI++L+ + + VTKNLRV
Sbjct: 713 ILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRV 772
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+ + IS + RR IIVRDANRFHHF+ G CSC D+W
Sbjct: 773 CGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 239/483 (49%), Gaps = 35/483 (7%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGH--CVETLELYSTMRRSGISSNSYTF 113
G + A LF+ I + ++ N +IRAY+++ + L LY M R ++ N+YTF
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTY--NDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTF 128
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
PF LKAC++ + G+ +H I G +D +V AL+DMY KC D +F M
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 174 RDLVSWTVMITAYEQAEKPEEAL--ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
RDLV+W M+ Y A+ +L + Q L ++ T+V++ + Q G + +
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 232 AVHGYAI--C--------NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+VH Y I C + + + + +++ MYA+CG++ AR VFD M R+ ++W+
Sbjct: 249 SVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308
Query: 282 SMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
+++ G++ + ++A LLF M C +P + + AC L ++G + H +
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
S + D T N+++ MYAK G +D A +F+++ + ++ S++ L++GY +G +A
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM--AVKDTVSYSALVSGYVQNGRAEEAF 426
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
F +M V+PD T S++ ACSH + GR + + E ++DM
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 486
Query: 461 GRAGCLYEAFDMIKQM--PLPPNDSV-WGALLLACRIHGEIAANYLFQLEPEHTGYFVLM 517
+ G D+ +Q+ +P D V W ++ IHG L E T F+ M
Sbjct: 487 AKCG----RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG---------LGKEATALFLEM 533
Query: 518 SNI 520
+N+
Sbjct: 534 NNL 536
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 353/573 (61%), Gaps = 12/573 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGF-LSDSYVQAALV-DMYAKCGQTDDGCKVFDEMSV 173
+L+ CAS+ L K +H IR G L++ + L+ + + VF +
Sbjct: 23 LLQFCASSKHKL--KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHN 80
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
++ +W +I Y +++ P A + +++ + D+ T + A+ + +V + +A+
Sbjct: 81 PNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAI 140
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H I N F + +QNS++ +YA CG+ E A VF++M++RDL++WNSM+ G+ NG+
Sbjct: 141 HSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRP 200
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
+EAL LF EM +P+ T + L+SA LG+ +LGR+ H Y++ + ++ + N++
Sbjct: 201 NEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSL 260
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+D+YAKCG + A+ +F+++ SERN SW LI G ++G G +ALE F +M +G+ P
Sbjct: 261 LDLYAKCGAIREAQRVFSEM--SERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVP 318
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
ITF +L ACSH G++DEG + F M + + P ++HY CMVD+L RAG + +A++
Sbjct: 319 SEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEY 378
Query: 473 IKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKW 527
I+ MP+ PN +W LL AC IHG EIA ++L LEP+H+G +VL+SN+YA+ +W
Sbjct: 379 IQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRW 438
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+V +R M G+KK +S++E G + F DR +P ++VY +E + +K+
Sbjct: 439 SDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLE 498
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
GY+P + L D+E+E++E L+YHSEK+A+AF ++N P ++V KNLRVC DCH A
Sbjct: 499 GYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAI 558
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ I+ IY R+I++RD +RFHHF GG+CSC DYW
Sbjct: 559 KLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 194/373 (52%), Gaps = 5/373 (1%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-ARSLFNSIHNDKSYSFLWNTMIR 83
L+QIH+ G+ +G +I + P + A ++F IHN F WNT+IR
Sbjct: 34 LKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNV--FTWNTIIR 91
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS 143
YA + + Y M S + +++T+PF+LKA + + + EG+ +H IR GF S
Sbjct: 92 GYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFES 151
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
+VQ +L+ +YA CG T+ KVF+ M RDLV+W MI + +P EAL LF++
Sbjct: 152 LVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMS 211
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
EG+ D T+VS+ SA +LG + + VH Y + ++ + NS++ +YA+CG +
Sbjct: 212 VEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIR 271
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+A+ VF M +R+ +SW S++ G NG EAL LF EM+ P+ +T + ++ AC+
Sbjct: 272 EAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACS 331
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ G G ++ + I M D+ ++ G + A ++ P + N
Sbjct: 332 HCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNM-PVQPNAVI 390
Query: 383 WNVLIAGYGMHGH 395
W L+ +HGH
Sbjct: 391 WRTLLGACTIHGH 403
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/570 (38%), Positives = 343/570 (60%), Gaps = 7/570 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+LK C L+ +G++VHG +I++ F D + L++MYAKCG ++ KVFD+M RD
Sbjct: 57 LLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERD 116
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
V+WT +I+ Y Q ++P +AL+LF + + G + T+ SV A +HG
Sbjct: 117 FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHG 176
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + F ++ + ++++ +Y R G ++ A+LVFD +E R+ +SWN+++ G+ + +
Sbjct: 177 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEK 236
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL LF M +P+ + L AC+ G + G+ H Y+I S K+ A N ++D
Sbjct: 237 ALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 296
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAK G + A +F+ + ++R+V SWN L+ Y HG G +A+ +F +M G++P+
Sbjct: 297 MYAKSGSIHDARKIFDRL--AKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNE 354
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
I+F S+L+ACSH+GL+DEG + M K + E HY +VD+LGRAG L A I++
Sbjct: 355 ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEE 414
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ P ++W ALL ACR+H G AA ++F+L+P+ G V++ NIYA+ +W +
Sbjct: 415 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 474
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
++R+ MK G+KK A S +E I F D +P +E+ +K E + +IK GY+
Sbjct: 475 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYV 534
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
PD S + V+ ++RE L YHSEK+A+AF ++N P + + + KN+RVC DCHSA +
Sbjct: 535 PDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLA 594
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S R+IIVRD NRFHHF+ G CSC DYW
Sbjct: 595 SKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 219/450 (48%), Gaps = 14/450 (3%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P FY+ LLK C L Q +H L S + L + ++ Y G AR
Sbjct: 48 PVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQS-IFRHDLVMNNTLLNMYAKCGSLEEAR 106
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F+ + + W T+I Y+ + + L L++ M R G S N +T V+KA A+
Sbjct: 107 KVFDKMPERDFVT--WTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAA 164
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
G +HG ++ GF S+ +V +AL+D+Y + G DD VFD + R+ VSW +
Sbjct: 165 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 224
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I + + E+AL LFQ +EG + S+ A G + + + VH Y I +
Sbjct: 225 IAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 284
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
N+++ MYA+ G++ AR +FD + KRD++SWNS+LT Y Q+G +EA+ F+E
Sbjct: 285 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEE 344
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M+ +PN ++ L +++AC++ G G ++ + + ++A ++D+ + GD
Sbjct: 345 MRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGD 404
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFT 419
L+ A ++ P E + W L+ MH + G A E ++ + P H+
Sbjct: 405 LNRALRFIEEM-PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP-HVILY 462
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPE 449
+I ++ G ++ + M + VK E
Sbjct: 463 NIYAS---GGRWNDAARVRKKMKESGVKKE 489
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/578 (38%), Positives = 345/578 (59%), Gaps = 9/578 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
+S TF L ACA + G+ V G+ D +V ++L+ +YA+ G D KVF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
M RD V+W+ M+ + A +P +A+ ++++ +++G+ D V ++ V A +V
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+VHG+ + + D+ S+V MYA+ G ++ A VF +M R+ +SW++M++G+
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFA 286
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
QNGQ+ EAL LF MQ S +P+ + + AC+ +G +LGR HG+I+ +
Sbjct: 287 QNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCI 345
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
L A +DMY+KCG L +A+ +FN I S+R++ WN +IA G HG G+ AL F +M E
Sbjct: 346 LGTAAIDMYSKCGSLASAQMLFNMI--SDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLY 467
G++PDH TF S+LSA SH+GL++EG+ F M + P KHY C+VD+L R+G +
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463
Query: 468 EAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYA 522
EA D++ M P ++W ALL C + GE A+ + +L+P+ G L+SN+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523
Query: 523 ASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAV 582
A+ KW +V ++R+ MK+ G KK S IE F D+ +P +E+ KV + +
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583
Query: 583 EIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCND 642
E++ GY+P HD+E+E +E L+YHSE+LA+AFG++N P + + KNLRVC D
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643
Query: 643 CHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
CH A ++IS I R+I+VRDA RFHHF+ G CSC DYW
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/697 (36%), Positives = 393/697 (56%), Gaps = 29/697 (4%)
Query: 4 LGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
L P+ F +L SC +SL R IH+ + G + + + ++ Y G +
Sbjct: 229 LLPNRASFV-AILSSCGDHSSLPLARSIHARVEELGFLGDVV-VATALVTMYGRCGSVDE 286
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA- 119
+ ++F ++ S WN MI A+A GH +Y M++ G N TF LKA
Sbjct: 287 SIAVFEAMAVRNHVS--WNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA 344
Query: 120 CASNSLIL-EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
C+S+S L E +HG I G D V ALV MY G D FD + +++VS
Sbjct: 345 CSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVS 404
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
W M+TAY + EA+ LF +++ L + V+ ++V +G DV +A+++H +
Sbjct: 405 WNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAV---LGCCEDVSEARSIHAEVV 461
Query: 239 CNA-FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
N F ++ I N +V M+AR G++E+A FD +D +SWN+ + A+
Sbjct: 462 GNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAI 521
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDM 356
F MQ+ +P+ T + +V C LG+ +LGR + + ++ D + +AVM+M
Sbjct: 522 TAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNM 581
Query: 357 YAKCGD-LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPD 414
AKCG +D E +F + +++ +WN +IA Y HGHGRKAL+ F M + V+PD
Sbjct: 582 VAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPD 641
Query: 415 HITFTSILSACSHAGLIDEGRKCF---ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
TF S+LS CSHAGL+++G CF ++ + +P V+HYAC+VD+LGR G L EA D
Sbjct: 642 SSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQP-VEHYACLVDVLGRMGYLREAED 700
Query: 472 MIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNK 526
I++MPLP + VW +LL AC +G++ AA +L + +V++SNIYAA+ +
Sbjct: 701 FIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGR 760
Query: 527 WREVGKLREDMKNKGLKK--PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
W + ++REDM + +KK P S++ + + F DR +P E+Y ++E + I
Sbjct: 761 WEDSIRVREDMAERRVKKRAPGKSSIVVKNR-VHEFFARDRSHPQSDEIYAELERLKGLI 819
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
+ AGY+PD LHDVE+E +E +L YHSEKLA+AFG++++ ++V KNLRVC DCH
Sbjct: 820 REAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCH 879
Query: 645 SAFRFISYIYRRKIIVRDANRFHHF-EGGTCSCNDYW 680
+A +FI+ + +R+I VRD NRFHHF + G CSC DYW
Sbjct: 880 TATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 255/527 (48%), Gaps = 34/527 (6%)
Query: 15 LLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL+ C LA RQ+H + GL L LG ++ Y+ + A + F+++ +
Sbjct: 30 LLRRCIGDADLAQGRQLHRQIVKQGLARNDL-LGNYLVQMYSKCRSLDDANAAFSALRSR 88
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMR---RSGISSNSYTFPFVLKACASNSLIL- 127
+ WNT+I A ++ +LY+ M+ R+ N T VL A AS
Sbjct: 89 GIAT--WNTLIAAQSSPA---AVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSSS 143
Query: 128 -----EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
+ ++VH DI + D +V AL+D Y KCG + +VF + V DL+ W
Sbjct: 144 SSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAA 203
Query: 183 ITAYE-QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
I A E+P+ AL+L ++ EGLL + + V++ S+ G + A+++H
Sbjct: 204 IMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELG 263
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
FL D+ + ++V MY RCG+V+++ VF+ M R+ +SWN+M+ + Q G S A ++
Sbjct: 264 FLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYW 323
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRK--FHGYIINSNMKIDATLRNAVMDMYAK 359
MQ +PN +T + + A S+ LG HG+I + ++ D + A++ MY
Sbjct: 324 RMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGS 383
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
G +D A F+ I P+ +N+ SWN ++ YG +G R+A+E F+ M + + P+ +++
Sbjct: 384 TGAIDRARAAFDAI-PA-KNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 441
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA-CMVDMLGRAGCLYEAFDMIKQMPL 478
++L C + E R A++ + + A +V M R+G L EA +
Sbjct: 442 AVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVV 498
Query: 479 PPNDSV-WGALLLACR----IHGEIAANYLFQLEPEHTGYFVLMSNI 520
DSV W + A +HG I A Y Q E F L+S +
Sbjct: 499 --KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVV 543
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 191/461 (41%), Gaps = 62/461 (13%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T +L+ C ++ + +G+ +H I++ G + + LV MY+KC DD F +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS---DSVTIVSVASAVGQLGD-- 226
R + +W +I A P L+ + + E + +TI++V A+ GD
Sbjct: 86 RSRGIATWNTLIAAQ---SSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIAS-GDPS 141
Query: 227 ---VLKAQA--VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+AQA VH + DL + +++ Y +CG VE A VF ++ DLI WN
Sbjct: 142 SSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWN 201
Query: 282 SMLTGYIQNGQASE-ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
+ + N + + ALLL M PN + + ++S+C S L R H +
Sbjct: 202 AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEE 261
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
D + A++ MY +CG +D + +F + + RN SWN +IA + GH A
Sbjct: 262 LGFLGDVVVATALVTMYGRCGSVDESIAVFEAM--AVRNHVSWNAMIAAFAQCGHRSAAF 319
Query: 401 EFFSQMLEEGVKPDHITF-TSILSACSHA------------------------------- 428
+ +M +EG +P+ ITF T++ +ACS +
Sbjct: 320 AIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVT 379
Query: 429 -----GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
G ID R F + ++ D GRA E F +K+ L PN
Sbjct: 380 MYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDN-GRAREAMELFAAMKRQSLAPNKV 438
Query: 484 VWGALLLACR-------IHGEIAANYLFQLEPEHTGYFVLM 517
+ A+L C IH E+ N LF E V M
Sbjct: 439 SYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRM 479
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/723 (34%), Positives = 397/723 (54%), Gaps = 96/723 (13%)
Query: 7 STEGFYDQLLKSC---NFLASLRQIHSSL-------TTSGLINQALHLGAKIIIKYTTYG 56
+T Y QL+ C N + +++ S + T S L NQ LHL Y +G
Sbjct: 20 ATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHL-------YAKFG 72
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCV------------------------ 92
+ A++LF+ + K F WN ++ AYA +G
Sbjct: 73 KLRDAQNLFDKML--KRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGF 130
Query: 93 -------ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
E+LEL+ M+R G YT +L A A S + GK +HG II FL +
Sbjct: 131 SGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNV 190
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL DMYAKCG+ + +FD ++ ++LVSW +MI+ Y + +PE+ + L + +
Sbjct: 191 FIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLS 250
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G + D VT+ ++ +A Y +CG V++A
Sbjct: 251 GHMPDQVTMSTI-----------------------------------IAAYCQCGRVDEA 275
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VF +++D++ W +M+ GY +NG+ +ALLLF+EM +P+ T +VS+C L
Sbjct: 276 RRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKL 335
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
S G+ HG I + + + + +A++DMY+KCG +D A ++FN + P+ RNV SWN
Sbjct: 336 ASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFN-LMPT-RNVVSWNA 393
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KL 444
+I G +GH + ALE F ML++ KPD++TF ILSAC H I++G++ F +T +
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQH 453
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIA 499
+ P + HYACMV++LGR G + +A +IK M P+ +W LL C G E+A
Sbjct: 454 GMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVA 513
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A +LF+L+P ++++SN+YA+ +W++V +R MK+K +KK A FS IE ++
Sbjct: 514 ARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHR 573
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F + DR +P +++Y+K+ + +++ G+ P+ + LHDV ++++ + +HSEKLA+A
Sbjct: 574 FTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALA 633
Query: 620 FGIMNLTPEAV--VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
FG++ P + +++ KN+R+CNDCH +F S I R+II+RD+NRFHHF G CSCN
Sbjct: 634 FGLIK-KPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCN 692
Query: 678 DYW 680
D W
Sbjct: 693 DNW 695
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/642 (38%), Positives = 368/642 (57%), Gaps = 32/642 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGI 106
+I + +G + AR F+ + S WN M+ AY NG E L+ S I
Sbjct: 137 MISSHANHGLVSLARHYFDLAPEKDAVS--WNGMLAAYVRNGRVEEARGLFNSRTEWDVI 194
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
S N+ +V S + L ++ D++ + V YA+ G + +
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM---------VSGYARRGDMVEARR 245
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD VRD+ +WT +++ Y Q EEA +F + ++V+ ++ +A Q
Sbjct: 246 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRM 301
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ +A+ + C ++ N+++ YA+ G +E+A+ VFD M ++D +SW +ML
Sbjct: 302 MDEAKELFNMMPC----RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y Q G + E L LF EM N ++S C + + + G + HG +I + +
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA++ MY KCG+++ A N F ++ ER+V SWN +IAGY HG G++ALE F M
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEME--ERDVVSWNTMIAGYARHGFGKEALEIFDMM 475
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLGRA 463
KPD IT +L+ACSH+GL+++G F M ++ KPE HY CM+D+LGRA
Sbjct: 476 RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE--HYTCMIDLLGRA 533
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L EA D++K MP P+ ++WGALL A RIH G AA +F+LEPE+ G +VL+S
Sbjct: 534 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLS 593
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA+S KWR+ K+R M+ +G+KK FS IE + F D V+P +++Y +E
Sbjct: 594 NIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLE 653
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ + +K AGY+ LHDVE+E++EHML YHSEKLAVA+GI+N+ P ++V KNLR
Sbjct: 654 DLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLR 713
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH+AF++IS I R I++RD+NRFHHF GG+CSC DYW
Sbjct: 714 VCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 33/343 (9%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ + + G+ D ++F M R ++ M+ Y + A LF+ + S +
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYN 104
Query: 212 VTI--VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
+ ++V+S++ + V D N +++ +A G V AR F
Sbjct: 105 TLLHALAVSSSLADARGLFDEMPV----------RDSVTYNVMISSHANHGLVSLARHYF 154
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D+ ++D +SWN ML Y++NG+ EA LF NS + + ++ L+S G
Sbjct: 155 DLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNALMSGYVQWGKMS 210
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
R+ + D N ++ YA+ GD+ A +F D P R+V +W +++G
Sbjct: 211 EARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLF-DAAPV-RDVFTWTAVVSG 264
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
Y +G +A F M E + +++ ++++A ++DE ++ F M +
Sbjct: 265 YAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN---- 316
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA 491
V + M+ +AG L EA + M P D+V W A+L A
Sbjct: 317 VASWNTMLTGYAQAGMLEEAKAVFDTM--PQKDAVSWAAMLAA 357
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 50/273 (18%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ----------------- 292
N + + R G V A +F M +R ++N+ML GY NG+
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101
Query: 293 --------------ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
++A LFDEM D VT +++S+ G L R +
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDS----VTYNVMISSHANHGLVSLARHY---- 153
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ + DA N ++ Y + G ++ A +FN +E +V SWN L++GY G +
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS--RTEWDVISWNALMSGYVQWGKMSE 211
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
A E F +M D +++ ++S + G + E R+ F D + +V + +V
Sbjct: 212 ARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLF-DAAPVR---DVFTWTAVVS 263
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ G L EA + MP N W A++ A
Sbjct: 264 GYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAA 295
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 261/701 (37%), Positives = 399/701 (56%), Gaps = 30/701 (4%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
R+ P+ F LK+C+ LA R IH +GL L + ++ Y
Sbjct: 120 RVAPNNYTF-PFALKACSALADHHCGRAIHRHAIHAGL-QADLFVSTALLDMYVKCACLP 177
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNG---HCVETLELYSTMRRSGISSNSYTFPFV 116
A +F ++ + WN M+ YA++G H V L L M+ + N+ T +
Sbjct: 178 DAAHIFATMPARDLVA--WNAMLAGYAHHGMYHHAVAHL-LSMQMQMHRLRPNASTLVAL 234
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDS----------YVQAALVDMYAKCGQTDDGCK 166
L A + +G VH IR S+ + AL+DMYAKCG +
Sbjct: 235 LPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 294
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT-IVSVASAVGQLG 225
VFD M R+ V+W+ +I + + +A +LF+ +GL S T I S A L
Sbjct: 295 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 354
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + +H + DL NS+++MYA+ G +++A +FD M +D +S++++++
Sbjct: 355 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 414
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY+QNG+A EA L+F +MQ + +P+ T + L+ AC++L + Q GR HG +I +
Sbjct: 415 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 474
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ ++ NA++DMYAKCG +D + +FN + PS R++ SWN +IAGYG+HG G++A F +
Sbjct: 475 ETSICNALIDMYAKCGRIDLSRQVFN-MMPS-RDIVSWNTMIAGYGIHGLGKEATALFLE 532
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M G PD +TF +LSACSH+GL+ EG+ F M + P ++HY CMVD+L R G
Sbjct: 533 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGG 592
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA++ I+ MPL + VW ALL ACR++ G+ + + +L PE TG FVL+SN
Sbjct: 593 FLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 652
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+A+ ++ E ++R K +G KK S IE + F D+ +P E+Y+++++
Sbjct: 653 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 712
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ V IK GY PD S L D+E+E++E L HSEKLA+A+GI++L+ + + VTKNLRV
Sbjct: 713 ILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRV 772
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+ + IS + RR IIVRDANRFHHF+ G CSC D+W
Sbjct: 773 CGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 239/483 (49%), Gaps = 35/483 (7%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGH--CVETLELYSTMRRSGISSNSYTF 113
G + A LF+ I + ++ N +IRAY+++ + L LY M R ++ N+YTF
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTY--NDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTF 128
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
PF LKAC++ + G+ +H I G +D +V AL+DMY KC D +F M
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 174 RDLVSWTVMITAYEQAEKPEEAL--ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
RDLV+W M+ Y A+ +L + Q L ++ T+V++ + Q G + +
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 232 AVHGYAI--C--------NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+VH Y I C + + + + +++ MYA+CG++ AR VFD M R+ ++W+
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308
Query: 282 SMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
+++ G++ + ++A LLF M C +P + + AC L ++G + H +
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
S + D T N+++ MYAK G +D A +F+++ + ++ S++ L++GY +G +A
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM--AVKDTVSYSALVSGYVQNGRAEEAF 426
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
F +M V+PD T S++ ACSH + GR + + E ++DM
Sbjct: 427 LVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMY 486
Query: 461 GRAGCLYEAFDMIKQM--PLPPNDSV-WGALLLACRIHGEIAANYLFQLEPEHTGYFVLM 517
+ G D+ +Q+ +P D V W ++ IHG L E T F+ M
Sbjct: 487 AKCG----RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG---------LGKEATALFLEM 533
Query: 518 SNI 520
+N+
Sbjct: 534 NNL 536
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/603 (36%), Positives = 363/603 (60%), Gaps = 11/603 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN+++ ++ N+G ++ L L +M SG S N TF L AC + +G+++HG ++
Sbjct: 313 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 372
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+G + + ALV MY K G+ + +V +M RD+V+W +I Y + E P++AL
Sbjct: 373 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 432
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVL-KAQAVHGYAICNAFLEDLCIQNSIVAMY 256
FQ + EG+ S+ +T+VSV SA GD+L + + +H Y + F D ++NS++ MY
Sbjct: 433 AFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMY 492
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+CG++ ++ +F+ ++ R++I+WN+ML +G E L L +M++ + +
Sbjct: 493 AKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFS 552
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
+SA L + G++ HG + + D+ + NA DMY+KCG++ M + PS
Sbjct: 553 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM---LPPS 609
Query: 377 -ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
R++ SWN+LI+ G HG+ + F +MLE G+KP H+TF S+L+ACSH GL+D+G
Sbjct: 610 VNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 669
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ + + ++P ++H C++D+LGR+G L EA I +MP+ PND VW +LL +C+I
Sbjct: 670 AYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI 729
Query: 495 HGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
HG + AA L +LEPE +VL SN++A + +W +V +R+ M K +KK A S
Sbjct: 730 HGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACS 789
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
++ + F DR +P E+Y K+E + IK +GY+ D S AL D ++E +EH L
Sbjct: 790 WVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNL 849
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSE+LA+A+ +M+ + V++ KNLR+C+DCHS ++F+S + R+I++RD RFHHF
Sbjct: 850 WNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHF 909
Query: 670 EGG 672
E G
Sbjct: 910 ERG 912
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 206/414 (49%), Gaps = 6/414 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA-SNSLILEGKVVHGDI 136
WNTM+ G +E +E + M GI +S+ ++ AC S S+ EG VHG +
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++G LSD YV A++ +Y G KVF+EM R++VSWT ++ Y +PEE +
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+++ + EG+ + ++ V S+ G L D + + G + + L ++NS+++M
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
GNV+ A +FD M +RD ISWNS+ Y QNG E+ +F M+ + N T
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
L+S ++ ++ GR HG ++ + N ++ MYA G A +F + P+
Sbjct: 249 TLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM-PT 307
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+++ SWN L+A + G AL M+ G +++TFTS L+AC ++GR
Sbjct: 308 -KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 437 CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
+ + +V M G+ G + E+ ++ QM P D V W AL+
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM--PRRDVVAWNALI 418
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 149/308 (48%), Gaps = 3/308 (0%)
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK- 229
M VR+ VSW M++ + E + F+K G+ S I S+ +A G+ G + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
VHG+ + L D+ + +I+ +Y G V +R VF+ M R+++SW S++ GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
G+ E + ++ M+ N + +++S+C L LGR+ G ++ S ++ +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
N+++ M G++D A +F+ + SER+ SWN + A Y +GH ++ FS M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQM--SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
+ + T +++LS H GR + K+ V ++ M AG EA
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 470 FDMIKQMP 477
+ KQMP
Sbjct: 299 NLVFKQMP 306
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 13/241 (5%)
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR-QL 330
M R+ +SWN+M++G ++ G E + F +M + KP+ LV+AC GS +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G + HG++ S + D + A++ +Y G + + +F ++ +RNV SW L+ GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM--PDRNVVSWTSLMVGY 118
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE---GRKCFADMTKLSVK 447
G + ++ + M EGV + + + ++S+C GL+ + GR+ + K ++
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLE 175
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIAANY-LFQ 505
++ ++ MLG G + A + QM D++ W ++ A +G I ++ +F
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQM--SERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 506 L 506
L
Sbjct: 234 L 234
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/675 (35%), Positives = 384/675 (56%), Gaps = 46/675 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTY--GEPNTARSLFNSIHNDK 72
LL+ C + L+QIHS GL + L ++I + G N A +F++I +
Sbjct: 13 LLEKCKSMYQLKQIHSHTIKMGLSSDPL-FRNRVIAFCCAHESGNMNYAHQVFDTIPHPS 71
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
F+WNTMI+ Y+ H + +Y M S I + +TFPF LK + + GK +
Sbjct: 72 M--FIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKEL 129
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
++ GF S+ +VQ A + M++ CG D KVFD ++V+W +M++ Y + ++
Sbjct: 130 LNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQF 189
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+ + +L V SA +L D+ + + Y I I
Sbjct: 190 KISKMLL-----------------VLSACSKLKDLEWGKHIFKY-----------INGGI 221
Query: 253 VA-MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
V M+A CG +++A+ VFD M+ RD++SW +M+ GY++ AL LF EMQ S+ KP+
Sbjct: 222 VEHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPD 281
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + ++ AC LG+ +LG I ++ K D+ + NA++DMY KCG++ A+ +F
Sbjct: 282 EFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFK 341
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+++ +++ +W +I G ++GHG +AL FS M+E V PD IT+ +L AC ++
Sbjct: 342 EMY--QKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MV 395
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
D+G+ F +MT + +KP V HY CMVD+LG GCL EA ++I MP+ PN VWG+ L
Sbjct: 396 DKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLG 455
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACR+H ++AA + +LEPE+ +VL+ NIYAAS KW + ++R+ M +G+KK
Sbjct: 456 ACRVHKNVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKT 515
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S++E ++ F D+ +P KE+Y K+E+M + AGY PD S D+ +ED+
Sbjct: 516 PGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDK 575
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E L HSEKLA+A+ +++ P +++ KNLR+C DCH + +S Y R++IV+D R
Sbjct: 576 ETALYRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTR 635
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G+CSCN++W
Sbjct: 636 FHHFRHGSCSCNNFW 650
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/578 (38%), Positives = 345/578 (59%), Gaps = 9/578 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
+S TF L ACA + G+ V G+ D +V ++L+ +YA+ G D KVF
Sbjct: 107 DSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVKVF 166
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
M RD V+W+ M+ + A +P +A+ ++++ +++G+ D V ++ V A +V
Sbjct: 167 VRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVR 226
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+VHG+ + + D+ S+V MYA+ G ++ A VF +M R+ +SW++M++G+
Sbjct: 227 MGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFA 286
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
QNGQ+ EAL LF MQ S +P+ + + AC+ +G +LGR HG+I+ +
Sbjct: 287 QNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCI 345
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
L A +DMY+KCG L +A+ +FN I S+R++ WN +IA G HG G+ AL F +M E
Sbjct: 346 LGTAAIDMYSKCGSLASAQMLFNMI--SDRDLILWNAMIACCGAHGRGQDALTLFQEMNE 403
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLY 467
G++PDH TF S+LSA SH+GL++EG+ F M + P KHY C+VD+L R+G +
Sbjct: 404 TGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVE 463
Query: 468 EAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYA 522
EA D++ M P ++W ALL C + GE A+ + +L+P+ G L+SN+YA
Sbjct: 464 EASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYA 523
Query: 523 ASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAV 582
A+ KW +V ++R+ MK+ G KK S IE F D+ +P +E+ KV + +
Sbjct: 524 ATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDL 583
Query: 583 EIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCND 642
E++ GY+P HD+E+E +E L+YHSE+LA+AFG++N P + + KNLRVC D
Sbjct: 584 EMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGD 643
Query: 643 CHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
CH A ++IS I R+I+VRDA RFHHF+ G CSC DYW
Sbjct: 644 CHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/561 (40%), Positives = 350/561 (62%), Gaps = 24/561 (4%)
Query: 137 IRTG-FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+R+G F SD Y +AL+ MY C + D + FDE+ + V T M + Y + +
Sbjct: 120 LRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHS 179
Query: 196 LILFQKTQQEGLLSDSVTIVSVA------SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
L LF+ + SDS ++V A SA ++ D ++H F + +
Sbjct: 180 LELFRAM----IASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVV 235
Query: 250 NSIVAMYARCG--NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-- 305
N+++ YA+ G ++E AR VFD ME RD++SWNSM+ Y QNG ++EA+ L+ +M N
Sbjct: 236 NTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVG 294
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
K N V ++ AC + G+ Q G++ H ++ ++ + + +++DMY+KCG ++
Sbjct: 295 GGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEM 354
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A F I E+N+ SW+ +I GYGMHG G++ALE F++M G++P++ITF S+L+AC
Sbjct: 355 ASRAFRKI--KEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAAC 412
Query: 426 SHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SHAGL+DEGR + M + ++ V+HY CMVD+LGRAGCL EA+ +IK+M + P+ ++
Sbjct: 413 SHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAI 472
Query: 485 WGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
WGALL ACRIH E++ LF+L+ ++GY+VL+SNIYA + W++V ++R +K
Sbjct: 473 WGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKT 532
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
+ ++KP +S E I F+ D+ +P E+Y +E + ++ AGY+P+ LHD
Sbjct: 533 RRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHD 592
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
+++E++E L HSEKLAVAF +MN P +V+ + KNLRVC+DCH+A +FI+ I R+II
Sbjct: 593 LDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREII 652
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
+RD RFHHF+ G CSC DYW
Sbjct: 653 IRDLQRFHHFKDGLCSCRDYW 673
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 187/379 (49%), Gaps = 21/379 (5%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H SGL + + ++ Y P AR F+ I + + M Y
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPN--PVIVTAMASGYV 171
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTF---PFVLKACASNSLILEGKV---VHGDIIRTG 140
N +LEL+ M I+S+S + L A ++++ + + V +H I + G
Sbjct: 172 RNNLVYHSLELFRAM----IASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIG 227
Query: 141 FLSDSYVQAALVDMYAKCGQTD--DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
F ++ V ++D YAK G D KVFD M RD+VSW MI Y Q EA+ L
Sbjct: 228 FERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGL 286
Query: 199 FQKTQQ--EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+ K G+ ++V + +V A G + + +H + E++ + SIV MY
Sbjct: 287 YSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMY 346
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
++CG VE A F +++++++SW++M+TGY +G+ EAL +F EM+ S +PN +T +
Sbjct: 347 SKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFI 406
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIH 374
+++AC++ G GR ++ + I+A + + ++D+ + G LD A ++ ++
Sbjct: 407 SVLAACSHAGLLDEGRYWYN-AMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMK 465
Query: 375 PSERNVSSWNVLIAGYGMH 393
+ + + W L++ +H
Sbjct: 466 -VKPDAAIWGALLSACRIH 483
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/664 (36%), Positives = 380/664 (57%), Gaps = 18/664 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+IH GL ++ + + ++ Y+ G A+ LF+ N++ + WNTMI
Sbjct: 155 RIHGLAVKLGL-SEDVRVNNSLVDMYSKCGYLTEAQMLFDK--NNRKNAVSWNTMIGGLC 211
Query: 87 NNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
G+ E L+ M+ + I N T +L AC S + K +HG IR GF D
Sbjct: 212 TKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDE 271
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V V YAKCG +VF M + + SW +I Q P +AL L+ +
Sbjct: 272 LVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYS 331
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
GL+ D TI S+ A L + + VHG+ + + D I S++++Y CG A
Sbjct: 332 GLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSA 391
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
RL+FD ME++ +SWN+M++GY QNG +AL+LF ++ + +P+ + + ++ AC+
Sbjct: 392 RLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQ 451
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ +LG++ H Y + + + D + + +DMYAK G + + ++F+ + ++++SWN
Sbjct: 452 SALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGL--KNKDLASWNA 509
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+IA YG+HG G +++E F +M + G PD TF IL+ CSHAGL++EG K F +M
Sbjct: 510 IIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFH 569
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-----IA 499
++P+++HYAC++DMLGRAG L +A ++ +MP P+ VW +LL CR GE I
Sbjct: 570 GIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIV 629
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A L +LEP++ +V +SN+YA S +W +V ++R+ +K+ GL+K A S IE G +
Sbjct: 630 AEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHS 689
Query: 560 FHTADRVNPYWKEV---YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
F D + P KE+ ++K+E +I GY P+ S LHDV++E + L HSEKL
Sbjct: 690 FVAGDNLLPQSKEMSMTWRKLEKKMCKI---GYKPNTSAVLHDVDEEKKIEKLRGHSEKL 746
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
A+ FG++N T +++ KNLR+C DCH+A +F+S + R+II+RD RFHHF+ G CSC
Sbjct: 747 AICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSC 806
Query: 677 NDYW 680
DYW
Sbjct: 807 GDYW 810
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 240/476 (50%), Gaps = 15/476 (3%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
IH + GL+ +G +I Y +G + A +F+ + S WN++I ++
Sbjct: 53 IHGMVIKMGLLLDVF-VGNALIAMYGKFGFVDAAVKVFHYMPVRNLVS--WNSIISGFSE 109
Query: 88 NGHCVETLELYSTMR--RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NG + ++ M G+ + T VL CA + G +HG ++ G D
Sbjct: 110 NGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDV 169
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ-Q 204
V +LVDMY+KCG + +FD+ + ++ VSW MI EA LF++ Q Q
Sbjct: 170 RVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQ 229
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
E + + VT++++ A ++ + + +HGY+I + F D + N VA YA+CG +
Sbjct: 230 EDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLIC 289
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A VF ME + + SWN+++ G QNG +AL L+ +M S P+ T L+ A +
Sbjct: 290 AERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAH 349
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L S + G++ HG+++ ++ID+ + +++ +Y CG+ +A +F+ + E++ SWN
Sbjct: 350 LKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGME--EKSSVSWN 407
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
+I+GY +G AL F +++ +G +P I S+L ACS + G++ K
Sbjct: 408 AMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKA 467
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ +V +DM ++GC+ E+ FD +K L W A++ A +HG+
Sbjct: 468 LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLAS----WNAIIAAYGVHGD 519
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 184/333 (55%), Gaps = 5/333 (1%)
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
+++++TFP V+KAC + G+V+HG +I+ G L D +V AL+ MY K G D K
Sbjct: 28 NADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVK 87
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEA--LILFQKTQQEGLLSDSVTIVSVASAVGQL 224
VF M VR+LVSW +I+ + + ++ +++ +EGLL D T+V+V +
Sbjct: 88 VFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCARE 147
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
DV +HG A+ ED+ + NS+V MY++CG + +A+++FD +++ +SWN+M+
Sbjct: 148 VDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMI 207
Query: 285 TGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
G G EA LF EMQ D + N VT L ++ AC + + ++ HGY I
Sbjct: 208 GGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGF 267
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ D + N + YAKCG L AE +F + + V+SWN LI G +G RKAL +
Sbjct: 268 QYDELVANGFVAAYAKCGMLICAERVFYSMET--KTVNSWNALIGGCAQNGDPRKALNLY 325
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
QM G+ PD T S+L A +H + G++
Sbjct: 326 IQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKE 358
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/642 (38%), Positives = 368/642 (57%), Gaps = 32/642 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGI 106
+I + +G + AR F+ + S WN M+ AY NG E L+ S I
Sbjct: 12 MISSHANHGLVSLARHYFDLAPEKDAVS--WNGMLAAYVRNGRVEEARGLFNSRTEWDVI 69
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
S N+ +V S + L ++ D++ + V YA+ G + +
Sbjct: 70 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM---------VSGYARRGDMVEARR 120
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD VRD+ +WT +++ Y Q EEA +F + ++V+ ++ +A Q
Sbjct: 121 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRM 176
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ +A+ + C ++ N+++ YA+ G +E+A+ VFD M ++D +SW +ML
Sbjct: 177 MDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 232
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y Q G + E L LF EM N ++S C + + + G + HG +I + +
Sbjct: 233 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 292
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA++ MY KCG+++ A N F ++ ER+V SWN +IAGY HG G++ALE F M
Sbjct: 293 CFVGNALLAMYFKCGNMEDARNAFEEME--ERDVVSWNTMIAGYARHGFGKEALEIFDMM 350
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLGRA 463
KPD IT +L+ACSH+GL+++G F M ++ KPE HY CM+D+LGRA
Sbjct: 351 RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE--HYTCMIDLLGRA 408
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L EA D++K MP P+ ++WGALL A RIH G AA +F+LEPE+ G +VL+S
Sbjct: 409 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLS 468
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA+S KWR+ K+R M+ +G+KK FS IE + F D V+P +++Y +E
Sbjct: 469 NIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLE 528
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ + +K AGY+ LHDVE+E++EHML YHSEKLAVA+GI+N+ P ++V KNLR
Sbjct: 529 DLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLR 588
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH+AF++IS I R I++RD+NRFHHF GG+CSC DYW
Sbjct: 589 VCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 57/306 (18%)
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M VRD V++ VMI+++ GL+S + +A
Sbjct: 1 MPVRDSVTYNVMISSH----------------ANHGLVSLARHYFDLAPE---------- 34
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+D N ++A Y R G VE+AR +F+ + D+ISWN++++GY+Q
Sbjct: 35 -------------KDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQW 81
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+ SEA LFD M D V+ I+VS G R+ + ++ D
Sbjct: 82 GKMSEARELFDRMPGRDV----VSWNIMVSGYARRGDMVEARR----LFDAAPVRDVFTW 133
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
AV+ YA+ G L+ A +F D P ERN SWN ++A Y +A E F+ M
Sbjct: 134 TAVVSGYAQNGMLEEARRVF-DAMP-ERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN 191
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
V ++ ++L+ + AG+++E + F M + + +A M+ + GC E
Sbjct: 192 VA----SWNTMLTGYAQAGMLEEAKAVFDTMP----QKDAVSWAAMLAAYSQGGCSEETL 243
Query: 471 DMIKQM 476
+ +M
Sbjct: 244 QLFIEM 249
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 21/250 (8%)
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+ D N +++ +A G V AR FD+ ++D +SWN ML Y++NG+ EA LF
Sbjct: 3 VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-- 60
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
NS + + ++ L+S G R+ + D N ++ YA+ GD
Sbjct: 61 --NSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGD 114
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
+ A +F D P R+V +W +++GY +G +A F M E + +++ +++
Sbjct: 115 MVEARRLF-DAAPV-RDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMV 168
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
+A ++DE ++ F M +V + M+ +AG L EA + M P D
Sbjct: 169 AAYIQRRMMDEAKELFNMMPCRNVAS----WNTMLTGYAQAGMLEEAKAVFDTM--PQKD 222
Query: 483 SV-WGALLLA 491
+V W A+L A
Sbjct: 223 AVSWAAMLAA 232
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/627 (37%), Positives = 351/627 (55%), Gaps = 26/627 (4%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRS----GISSNSYTFPFVLKACASNSLILEGKVVH 133
W IR A+ G + L+ MR S SS + P LK+CA+ L G +H
Sbjct: 22 WAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLH 81
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTD------DGC--------KVFDEMSVRDLVSW 179
+R+G +D + AL+++Y K DG KVFDEM +D+VSW
Sbjct: 82 ALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSW 141
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
++ ++ + EAL L ++ ++G DS T+ SV + DV + +HG+A
Sbjct: 142 NTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATR 201
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
N F +D+ + +S++ MYA C + + VFD + RD I WNSML G QNG EAL L
Sbjct: 202 NGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGL 261
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F M +S KP PVT L+ AC L S LG++ H Y+I + + ++++DMY K
Sbjct: 262 FRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCK 321
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG++ A +F+ I + + SW +I G+ +HG R+AL F +M +KP+HITF
Sbjct: 322 CGNVSIARRIFDRIQSPD--IVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFL 379
Query: 420 SILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
++L+ACSHAGL+D+G K F M+ + P ++H+A + D LGR G L EA++ I M +
Sbjct: 380 AVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKI 439
Query: 479 PPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKL 533
P SVW LL AC++H E A +F LEP G +++SN Y++S +W E L
Sbjct: 440 KPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHL 499
Query: 534 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
R+ M+ KG++K A S IE F D+ +P+++ + + + ++ GY+P+
Sbjct: 500 RKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNT 559
Query: 594 SCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYI 653
D+E+E + +L HSEKLA+ FGI++ P ++V KNLRVC DCH+ +FIS I
Sbjct: 560 DDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKI 619
Query: 654 YRRKIIVRDANRFHHFEGGTCSCNDYW 680
R+I++RDANRFHHF+ G CSC D+W
Sbjct: 620 VGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 171/396 (43%), Gaps = 60/396 (15%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
++H T +G + +G+ +I Y + + +F+++ + LWN+M+ A
Sbjct: 194 ELHGFATRNGFHDDVF-VGSSLIDMYANCTRTDYSVKVFDNL--PVRDAILWNSMLAGCA 250
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG E L L+ M SGI TF ++ AC + + +L GK +H +IR GF + +
Sbjct: 251 QNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVF 310
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
+ ++L+DMY KCG ++FD + D+VSWT MI + EAL+LF + +
Sbjct: 311 ISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGN 370
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAV---------------HGYAICNA---------- 241
L + +T ++V +A G V K H A+ +
Sbjct: 371 LKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEA 430
Query: 242 --FLEDLCIQN--SIVAMYARCGNVEK--------ARLVFDMMEKRDLISWNSMLTGYIQ 289
F+ + I+ S+ + R V K A+ +FD +E R + S + Y
Sbjct: 431 YNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFD-LEPRSMGSHIILSNTYSS 489
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK----- 344
+G+ +EA L M+ + P AC+++ ++ K H ++ +
Sbjct: 490 SGRWNEAAHLRKSMRKKGMQKEP--------ACSWI---EVKNKQHVFVAHDKSHPWYER 538
Query: 345 -IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
IDA N + + G + +++F DI ++N
Sbjct: 539 IIDAL--NVFSEQMVRQGYVPNTDDVFQDIEEEQKN 572
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/571 (39%), Positives = 346/571 (60%), Gaps = 8/571 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L++ A N +EG H IIR G +D+ L++MY+KCG + K+FDEM VR
Sbjct: 53 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
LVSW M+ ++ Q E+AL+LF + Q+EG T+ SV A V + + +HG
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 172
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+A+ A ++ + +++ +YA+CG V+ A LVF+ M +R ++W+SM+ GY+QN E
Sbjct: 173 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 232
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL+LF Q + N T +SAC + G++ + + + + ++++D
Sbjct: 233 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 292
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAKCG ++ A +F+ + E+NV WN +++G+ H +A+ +F +M + G+ P+
Sbjct: 293 MYAKCGIIEEAYTVFSSV--EEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPND 350
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
IT+ S+LSACSH GL+++GRK F M ++ +V P V HY+CMVD+LGRAG L+EA D I
Sbjct: 351 ITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFID 410
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
+MP S+WG+LL +CRI+ E+AA +LF++EP + G VL+SNIYAA+++W E
Sbjct: 411 RMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEE 470
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V + R +K KK S IE + F +R +P E+Y K+E + E+K GY
Sbjct: 471 VARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGY 530
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
LHDVE+ ++ +L +HSEKLA+ FGIM L A +++ KNLR+C DCHS +
Sbjct: 531 KAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKL 590
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S I R+IIVRD NRFHHF+ G CSC ++W
Sbjct: 591 ASSITEREIIVRDTNRFHHFKNGYCSCGEFW 621
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 191/338 (56%), Gaps = 4/338 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ G +AR LF+ + S WNTM+ ++ NG C + L L+ M++ G S + +
Sbjct: 92 YSKCGLVESARKLFDEMPVRSLVS--WNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEF 149
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T V+ ACA+ + E K +HG ++T S+ +V AL+D+YAKCG D VF+ M
Sbjct: 150 TVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECM 209
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
R V+W+ M+ Y Q E EEAL+LF + Q GL + TI S SA +++ +
Sbjct: 210 PERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK 269
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
V + ++ + +S++ MYA+CG +E+A VF +E+++++ WN++L+G+ ++
Sbjct: 270 QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHV 329
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN-SNMKIDATLR 350
++ EA++ F++MQ PN +T + ++SAC++LG + GRK+ +I N+ +
Sbjct: 330 RSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHY 389
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ ++D+ + G L A++ F D P + S W L+A
Sbjct: 390 SCMVDILGRAGLLHEAKD-FIDRMPFDATASMWGSLLA 426
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/603 (35%), Positives = 364/603 (60%), Gaps = 10/603 (1%)
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
+ A A+ G +TL+ ++ +++ + ++ ACA + + + +H + + F
Sbjct: 39 VPAAASTGIIRDTLD---SVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
++ +L+ +Y KCG D +VFD M RD+ SWT +I Y Q + P+EAL L
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ + T S+ A G + +H + + +D+ + ++++ MYARCG
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGR 215
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
++ A VFD +E ++ +SWN+++ G+ + G LL+F EMQ + + T + SA
Sbjct: 216 MDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA 275
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
+G+ + G+ H ++I S ++ A + N ++DMYAK G + A +F+ + +++V
Sbjct: 276 IAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRV--DKKDVV 333
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
+WN ++ + +G GR+A+ F +M + GV + ITF SIL+ACSH GL+ EG++ F M
Sbjct: 334 TWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM 393
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
+ +++PE+ HY +VD+LGRAG L +A I +MP+ P +VWGALL +CR+H G
Sbjct: 394 KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIG 453
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
+ AA+++F+L+P+ TG VL+ NIYA++ +W ++R+ MK G+KK A S +E
Sbjct: 454 QFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENS 513
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F D +P +E+YKK E ++++I+ AGY+P+ L V++++R+ L YHSEK+
Sbjct: 514 VHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKI 573
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
A+AF ++N+ A +++ KN+R+C DCHSAFR+IS +++R+I+VRD NRFHHF G+CSC
Sbjct: 574 ALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSC 633
Query: 677 NDY 679
DY
Sbjct: 634 GDY 636
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 200/394 (50%), Gaps = 7/394 (1%)
Query: 7 STEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
+T Y L+ +C SL R IH+ L S ++ L +I Y G AR
Sbjct: 62 ATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAG-SVFLDNSLIHLYCKCGAVADARR 120
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+ + S W ++I YA N E L L M R N +TF +LKA ++
Sbjct: 121 VFDGMPARDMCS--WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGAS 178
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ G+ +H ++ + D YV +AL+DMYA+CG+ D VFD++ ++ VSW +I
Sbjct: 179 ASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALI 238
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
+ + E L++F + Q+ G + T SV SA+ +G + + + VH + I +
Sbjct: 239 AGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGER 298
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ N+I+ MYA+ G++ AR VFD ++K+D+++WNSMLT + Q G EA+ F+EM
Sbjct: 299 LSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ N +T L +++AC++ G + G+++ + N++ + V+D+ + G L
Sbjct: 359 RKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLL 418
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ A +F P + + W L+ MH + +
Sbjct: 419 NDAL-VFIFKMPMKPTAAVWGALLGSCRMHKNAK 451
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/777 (32%), Positives = 388/777 (49%), Gaps = 112/777 (14%)
Query: 14 QLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP-----NTARSLF 65
+LL+ C A+ R IH+ +GL+ A +L ++ Y AR LF
Sbjct: 28 RLLQRCQTAANPGAGRAIHARAVKAGLLASA-YLCNNLLSYYAGPAAGGGGGFREARRLF 86
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCV-------------------------------ET 94
+ I + F WN+++ YA +G E
Sbjct: 87 DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEA 146
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
++++ M G+S +T VL +CA+ G+ VH +++ G S V ++++M
Sbjct: 147 IKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNM 206
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS----- 209
Y KCG + VF+ M R + SW M++ + + AL LF+ ++S
Sbjct: 207 YGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVI 266
Query: 210 ---------------------------DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
D TI SV SA LG V + VH Y + +
Sbjct: 267 AGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRM 326
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLV---------------------------------F 269
+ N++++MYA+ G+VE AR V F
Sbjct: 327 PYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMF 386
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D+M RD+++W +M+ GY QNG EA+ LF M S +PN T ++S C L +
Sbjct: 387 DVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLE 446
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G++ H I S + +++ N+++ MYA+ G L A +F+ +H + V+ W +I
Sbjct: 447 YGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVT-WTSMIVA 505
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKP 448
HG G A+ F +ML GVKPD ITF +LSAC+H G +DEG++ F + K + P
Sbjct: 506 LAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVP 565
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYL 503
E+ HYACMVD+L RAG EA + I+QMP+ P+ WG+LL ACR+H E+AA L
Sbjct: 566 EMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKL 625
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA 563
++P ++G + +SN+Y+A +W + K+ + K+K +KK FS G + F
Sbjct: 626 LSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGAD 685
Query: 564 DRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIM 623
D ++P VY+ M +IK AG++PDL LHDV+DE +E ML+ HSEKLA+AFG++
Sbjct: 686 DVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLV 745
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ + +++ KNLRVCNDCH+A +FIS + R+II+RDA RFHHF+ G CSC DYW
Sbjct: 746 STPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/679 (36%), Positives = 378/679 (55%), Gaps = 13/679 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y LL C L +R++H+ + L ++ LG ++ Y+ +G + A+ F I
Sbjct: 38 YASLLWQCRGLDEVRKLHAQIAARKL-DRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLH 96
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
++S WN ++ AYA NGH L+ M G+ N+ T L AC + + G+
Sbjct: 97 NAHS--WNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRK 154
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
++ I DS+V+++L+ MY +C + ++ + FD +D+V WT MI+AY +
Sbjct: 155 LNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWR 214
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF-LEDLCIQN 250
AL L ++ EG+ T VS+ A D+ A H A +
Sbjct: 215 TSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAG 274
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V +Y +CG V+ AR V D M R +SW +M+ Y QNG A+EA+ LF M +P
Sbjct: 275 TLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEP 334
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ +T + +V +C LG+ LG++ H I +S + L NAV+ MY KCG+L+ A +
Sbjct: 335 SDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREV 394
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML-EEGVKPDHITFTSILSACSHA 428
F + R+V +W +I Y +G G +A+E F +ML + G +P+ +TF S+L ACSH
Sbjct: 395 FECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHL 454
Query: 429 GLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WG 486
G +++ + F M V P HY C+VD+LGRAG L EA ++ + D V W
Sbjct: 455 GQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWI 514
Query: 487 ALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
A L AC+++G++ AA + +LEPE+ VL+SN+YAA + +V ++R +MK+ G
Sbjct: 515 AFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSG 574
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+KK A S IE + F +D +P E+Y ++E + EIK AGY+PD L DV+
Sbjct: 575 VKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVD 634
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
+E + +L YHSE+LA+A GI++ P ++V KNLRVC+DCH+A +FIS I R+IIVR
Sbjct: 635 EEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVR 694
Query: 662 DANRFHHFEGGTCSCNDYW 680
D +RFHHF+ G CSC DYW
Sbjct: 695 DTSRFHHFKDGVCSCGDYW 713
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 144/297 (48%), Gaps = 5/297 (1%)
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
+V+I AS + Q + + + +H + + N +V Y++ G++ A+L F
Sbjct: 32 TVSINDYASLLWQCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFG 91
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
+ + SWN ++ Y QNG A LF M + +PN VT + ACT + L
Sbjct: 92 RITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLAL 151
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
GRK + I + ++ID+ + ++++ MY +C +++ AE F+ E++V W +I+ Y
Sbjct: 152 GRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFD--RSPEKDVVCWTAMISAY 209
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV-KPE 449
+ +ALE +M EG+K T+ S+L AC+ + G + + +
Sbjct: 210 AHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSS 269
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYLFQ 505
+V++ G+ G + +A ++ MP+ + S W A++ A +G A A LFQ
Sbjct: 270 TVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVS-WTAMIAAYAQNGNAAEAINLFQ 325
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 232/611 (37%), Positives = 356/611 (58%), Gaps = 11/611 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W MI + N E + + MR G + F ++ACAS I GK +H +
Sbjct: 9 WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 68
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ G S+ +V + L DMY+KCG D CKVF+EM +D VSWT MI Y + + EEAL+
Sbjct: 69 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 128
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
F+K E + D + S A G L ++VH + F D+ + N++ MY+
Sbjct: 129 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 188
Query: 258 RCGNVEKARLVFDM-MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+ G++E A VF + E R+++S+ ++ GY++ Q + L +F E++ +PN T
Sbjct: 189 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 248
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI-HP 375
L+ AC + + G + H ++ N D + + ++DMY KCG L+ A F++I P
Sbjct: 249 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDP 308
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+E +WN L++ +G HG G+ A++ F +M++ GVKP+ ITF S+L+ CSHAGL++EG
Sbjct: 309 TE---IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 365
Query: 436 KCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
F M K V P +HY+C++D+LGRAG L EA + I +MP PN W + L ACRI
Sbjct: 366 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRI 425
Query: 495 HGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
HG+ +AA L +LEP+++G VL+SNIYA +W +V +R M++ +KK +S
Sbjct: 426 HGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYS 485
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
++ G F D +P +Y+K++++ +IK AGY+P D++D +E +L
Sbjct: 486 WVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLL 545
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
+ HSE++AVAF ++++ + V KNLRVC DCHSA +FIS + RKIIVRD +RFHHF
Sbjct: 546 HRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHF 605
Query: 670 EGGTCSCNDYW 680
G+CSC DYW
Sbjct: 606 TDGSCSCGDYW 616
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 165/326 (50%), Gaps = 2/326 (0%)
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M R+LVSWT MI+ Q K EA+ F + G + S A LG +
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H A+ +L + +++ MY++CG + A VF+ M +D +SW +M+ GY +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+ EALL F +M + + + + AC L + + GR H ++ + D +
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
NA+ DMY+K GD+++A N+F I RNV S+ LI GY K L F ++ +G
Sbjct: 181 NALTDMYSKAGDMESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
++P+ TF+S++ AC++ +++G + A + K++ + + +VDM G+ G L +A
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHG 496
++ P + W +L+ HG
Sbjct: 300 QAFDEIG-DPTEIAWNSLVSVFGQHG 324
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/789 (33%), Positives = 410/789 (51%), Gaps = 117/789 (14%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALH--LGAKIIIKYTTYGE- 57
+RRL S L S +FL +LR +H+ L TS L++ H L ++I YT G+
Sbjct: 22 LRRLAASRS------LTSSSFLRALRCLHARLLTSALLHAPPHPHLTLRLIHLYTLSGDL 75
Query: 58 ------------PNTARSL----------------FNSIHNDKSYSFLWNTMIRAYANNG 89
P A SL F+++ + + L N +I AYA
Sbjct: 76 PAAATLFRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARAS 135
Query: 90 HCVETLELYSTMRRSG-ISSNSYTFPFVLKACA--SNSLILEGKVVHGDIIRTGFLSDSY 146
H + ++ ++ SG + + Y+F +L A N + + ++++G
Sbjct: 136 HAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLS 195
Query: 147 VQAALVDMYAKCGQ---TDDGCKVFDEMSVRDLVSWTVM--------------------- 182
V ALV +Y KC T D KV DEM +D ++WT M
Sbjct: 196 VSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVD 255
Query: 183 ----------ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
I+ Y + EA LF++ E + D T SV SA G ++
Sbjct: 256 VKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKS 315
Query: 233 VHGYA--ICNAFLED--LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
VHG + F+ + L + N++V +Y++CGN+ AR +FD M+ +D++SWN++L+GY+
Sbjct: 316 VHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYV 375
Query: 289 QN-------------------------------GQASEALLLFDEMQNSDCKPNPVTALI 317
++ G + +AL LF+ M+ D KP T
Sbjct: 376 ESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAG 435
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+SAC LGS + G++ HG+++ + + NA++ MYA+CG + A MF + P+
Sbjct: 436 AISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFL-VMPNI 494
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
+VS WN +I+ G HGHGR+ALE F +M+ EG+ PD I+F ++L+AC+H+GL+DEG +
Sbjct: 495 DSVS-WNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQY 553
Query: 438 FADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
F M + + P HY ++D+LGRAG + EA D+IK MP P S+W A+L CR G
Sbjct: 554 FESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613
Query: 497 EI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
++ AA+ LF++ P+H G ++L+SN Y+A+ +W + ++R+ M+++G+KK S I
Sbjct: 614 DMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWI 673
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E G + F D +P +VYK +E + ++ GY+PD LHD+E +EH+L
Sbjct: 674 EAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFA 733
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSE+LAV FG++ L P A V V KNLR+C+DCH+ F+S R+I+VRD RFHHF+
Sbjct: 734 HSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKD 793
Query: 672 GTCSCNDYW 680
G CSC +YW
Sbjct: 794 GECSCGNYW 802
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/664 (35%), Positives = 385/664 (57%), Gaps = 15/664 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
++H+ L SGL+N + +G +I Y G N A +F + N S + WN+MI
Sbjct: 409 EVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVT--WNSMITGLD 466
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
N +E ++ + MRR+ + +++T L +CAS I G+ +H + ++ G D
Sbjct: 467 QNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVS 526
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE-EALILFQKTQQE 205
V AL+ +Y +CG + K F M D VSW +I A +E EA+ F +
Sbjct: 527 VSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRA 586
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G + VT +++ +AV L + +H + D I+N+++A Y +CG++
Sbjct: 587 GWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYC 646
Query: 266 RLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
+F M +++D +SWNSM++GYI N +A+ + M + + T ++SAC
Sbjct: 647 ENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACAT 706
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
+ + + G + HG + + ++ D + +A++DMYAKCG +D A F ++ P+ RN+ SWN
Sbjct: 707 VATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFF-EMMPA-RNLYSWN 764
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
+I+GY HGHG K+L+ F+QM +G PDH+TF +LSACSHAGL++EG F M+++
Sbjct: 765 SMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEI 824
Query: 445 -SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC-------RIHG 496
+ P ++H++CMVD+LGR G L + D + QMP+ PN +W +L AC G
Sbjct: 825 YGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALG 884
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
AA L ++EP + ++L+SN+YA+ KW +V K R M+ +KK A S +
Sbjct: 885 RRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDG 944
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F D+ +P +Y+K++ + ++++AGY+P+ AL+D+E E +E +L+YHSEK+
Sbjct: 945 VHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKI 1004
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
AVAF ++ + +++ KNLRVC DCHSAF++IS I R+I++RD+NRFHHFE G CSC
Sbjct: 1005 AVAF-VLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSC 1063
Query: 677 NDYW 680
D+W
Sbjct: 1064 GDFW 1067
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 229/481 (47%), Gaps = 27/481 (5%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
++H L +G +N L L +I Y G+ + R +F+ + S W+ +I Y
Sbjct: 94 ELHLQLFKNGFVND-LFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVS--WSCLISGYT 150
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC--ASNSLILEGKVVHGDIIRTGFLSD 144
N E EL+ M G N Y F V++AC + G +HG + +T +++D
Sbjct: 151 RNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVND 210
Query: 145 SYVQAALVDMYAKC-GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
L+ MY G D + FD + R+LVS MI+ Y Q A +F Q
Sbjct: 211 VTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ 270
Query: 204 QE----GLLSDSVTIVSVASAVGQL---GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+E GL + T S+ SA L G VL Q + + FL DL + +++V+ +
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEK-SGFLHDLYVGSALVSGF 329
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+ G++ A+ +F M R+++S N ++ G ++ + EA+ LF EM++S + NP + +
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS-VELNPNSYM 388
Query: 317 ILVSACTYL-----GSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMF 370
I+++A G R+ G + H ++I S + + N +++MYAKCG ++ A +F
Sbjct: 389 IILTAFPEFHVLENGKRK-GSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVF 447
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ ++ +WN +I G + +A++ F +M + P + T S LS+C+ G
Sbjct: 448 RLM--DNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGW 505
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE---AFDMIKQMPLPPNDSVWGA 487
I G + + KL + +V ++ + G G + E AF ++ +S+ GA
Sbjct: 506 ISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGA 565
Query: 488 L 488
L
Sbjct: 566 L 566
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/680 (35%), Positives = 385/680 (56%), Gaps = 19/680 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ +LK+C ++ + ++IH+ + G + +G +I Y G+ + AR LF+ +
Sbjct: 201 FPSVLKTCAGVSDIARGKEIHAHVIRFGF-ESDVDVGNALITMYVKCGDISNARMLFDKM 259
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WN MI Y NG +E LEL+S MR + + T V AC
Sbjct: 260 PKRDRIS--WNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERL 317
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ VHG ++++ F D + +L+ MY+ G+ ++ VF M +D+VSWT MI +
Sbjct: 318 GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ P +A+ ++ + EG+L D +T+VSV SA +G + +H AI + + +
Sbjct: 378 HKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIV 437
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
NS++ MY++C V+ A VF + ++++SW S++ G N ++ EALL F +M+ S
Sbjct: 438 SNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-M 496
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KPN VT + ++SAC +G+ G++ H + + + + D L NA++DMY +CG A N
Sbjct: 497 KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALN 556
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
FN +++V++WN+L+ GY G + A+E F +MLE + PD ITF S+L ACS +
Sbjct: 557 QFNS---QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613
Query: 429 GLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
G++ EG + F M K ++ P +KHYAC+VD+LGRAG L +A+D I+ MP+ P+ ++WGA
Sbjct: 614 GMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGA 673
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACRIH GEIAA +F+ + + GY++L+ N+YA W +V K+R M+ +GL
Sbjct: 674 LLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
S +E + F + D + KE+ ++ ++K G+ +L + +
Sbjct: 734 SADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF-GNLKSSFTSEIE 792
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
R + HSE+ A+AFG++N P + V KNL +C+ CH+ +FIS I RR+I VRD
Sbjct: 793 SSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRD 852
Query: 663 ANRFHHFEGGTCSCND--YW 680
+HHF+ G CSC D YW
Sbjct: 853 VEEYHHFKDGVCSCGDEGYW 872
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/513 (30%), Positives = 250/513 (48%), Gaps = 47/513 (9%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
+ LG ++ + +G A +F + +S WN ++ YA G E L LY M
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFS--WNVLVGGYAKAGCFDEALNLYHRM 189
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
+ I N YTFP VLK CA S I GK +H +IR GF SD V AL+ MY KCG
Sbjct: 190 LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
+ +FD+M RD +SW MI+ Y + E L LF ++ + D +T+ +VASA
Sbjct: 250 SNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASAC 309
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L + + VHGY + + F D+ + NS++ MY+ G +E+A VF ME +D++SW
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWT 369
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ + + +A+ + M+ P+ +T + ++SAC +G LG + H I +
Sbjct: 370 AMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT 429
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + N+++DMY+KC +D A +F +I S +NV SW LI G ++ +AL
Sbjct: 430 GLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI--SGKNVVSWTSLILGLRINNRSFEALL 487
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV--------------- 446
FF QM +E +KP+ +T S+LSAC+ G + G++ A + V
Sbjct: 488 FFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYV 546
Query: 447 ---------------KPEVKHYACMVD---MLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
K +V + ++ G+A E FD + ++ + P++ + +L
Sbjct: 547 RCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISL 606
Query: 489 LLACRIHGEIAANYLFQLEPEHTGYFVLMSNIY 521
L AC G + E YF +M N Y
Sbjct: 607 LCACSKSGMVT---------EGLEYFNIMKNKY 630
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ L+ C + + G + + + +S + L NA++ M+ + G+L A +F +
Sbjct: 101 IALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKM-- 158
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
SER+V SWNVL+ GY G +AL + +ML ++P+ TF S+L C+ I G+
Sbjct: 159 SERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGK 218
Query: 436 KCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ A + + + +V ++ M + G + A + +MP S W A++
Sbjct: 219 EIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRIS-WNAMI 271
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/723 (34%), Positives = 397/723 (54%), Gaps = 96/723 (13%)
Query: 7 STEGFYDQLLKSC---NFLASLRQIHSSL-------TTSGLINQALHLGAKIIIKYTTYG 56
+T Y QL+ C N + +++ S + T S L NQ LHL Y +G
Sbjct: 20 ATSEAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHL-------YAKFG 72
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCV------------------------ 92
+ A++LF+ + K F WN ++ AYA +G
Sbjct: 73 KLRDAQNLFDKML--KRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGF 130
Query: 93 -------ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
E+LEL+ M+R G YT +L A A + GK +HG II FL +
Sbjct: 131 SGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNV 190
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL DMYAKCG+ + +FD ++ ++LVSW +MI+ Y + +PE+ + L + +
Sbjct: 191 FIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLS 250
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G + D VT+ ++I+A Y +CG V++A
Sbjct: 251 GHMPDQVTM-----------------------------------STIIAAYCQCGRVDEA 275
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VF +++D++ W +M+ GY +NG+ +ALLLF+EM +P+ T +VS+C L
Sbjct: 276 RRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKL 335
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
S G+ HG I + + + + +A++DMY+KCG +D A ++FN + P+ RNV SWN
Sbjct: 336 ASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFN-LMPT-RNVVSWNA 393
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KL 444
+I G +GH + ALE F ML++ KPD++TF ILSAC H I++G++ F ++ +
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQH 453
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIA 499
+ P + HYACMV++LGR G + +A +IK M P+ +W LL C G E+A
Sbjct: 454 GMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVA 513
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A +LF+L+P ++++SN+YA+ +W++V +R MK+K +KK A FS IE ++
Sbjct: 514 ARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHR 573
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F + DR +P +++Y+K+ + +++ G+ P+ + LHDV ++++ + +HSEKLA+A
Sbjct: 574 FTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALA 633
Query: 620 FGIMNLTPEAV--VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
FG++ P + +++ KN+R+CNDCH +F S I R+II+RD+NRFHHF G CSCN
Sbjct: 634 FGLIK-KPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCN 692
Query: 678 DYW 680
D W
Sbjct: 693 DNW 695
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/571 (39%), Positives = 346/571 (60%), Gaps = 8/571 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L++ A N +EG H IIR G +D+ L++MY+KCG + K+FDEM VR
Sbjct: 26 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
LVSW M+ ++ Q E+AL+LF + Q+EG T+ SV A V + + +HG
Sbjct: 86 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 145
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+A+ A ++ + +++ +YA+CG V+ A LVF+ M +R ++W+SM+ GY+QN E
Sbjct: 146 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 205
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL+LF Q + N T +SAC + G++ + + + + ++++D
Sbjct: 206 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 265
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAKCG ++ A +F+ + E+NV WN +++G+ H +A+ +F +M + G+ P+
Sbjct: 266 MYAKCGIIEEAYTVFSSV--EEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPND 323
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
IT+ S+LSACSH GL+++GRK F M ++ +V P V HY+CMVD+LGRAG L+EA D I
Sbjct: 324 ITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFID 383
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
+MP S+WG+LL +CRI+ E+AA +LF++EP + G VL+SNIYAA+++W E
Sbjct: 384 RMPFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEE 443
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V + R +K KK S IE + F +R +P E+Y K+E + E+K GY
Sbjct: 444 VARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGY 503
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
LHDVE+ ++ +L +HSEKLA+ FGIM L A +++ KNLR+C DCHS +
Sbjct: 504 KAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKL 563
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S I R+IIVRD NRFHHF+ G CSC ++W
Sbjct: 564 ASSITEREIIVRDTNRFHHFKNGYCSCGEFW 594
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 191/338 (56%), Gaps = 4/338 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ G +AR LF+ + S WNTM+ ++ NG C + L L+ M++ G S + +
Sbjct: 65 YSKCGLVESARKLFDEMPVRSLVS--WNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEF 122
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T V+ ACA+ + E K +HG ++T S+ +V AL+D+YAKCG D VF+ M
Sbjct: 123 TVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECM 182
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
R V+W+ M+ Y Q E EEAL+LF + Q GL + TI S SA +++ +
Sbjct: 183 PERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK 242
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
V + ++ + +S++ MYA+CG +E+A VF +E+++++ WN++L+G+ ++
Sbjct: 243 QVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHV 302
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN-SNMKIDATLR 350
++ EA++ F++MQ PN +T + ++SAC++LG + GRK+ +I N+ +
Sbjct: 303 RSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHY 362
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ ++D+ + G L A++ F D P + S W L+A
Sbjct: 363 SCMVDILGRAGLLHEAKD-FIDRMPFDATASMWGSLLA 399
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/555 (40%), Positives = 338/555 (60%), Gaps = 9/555 (1%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH ++ G L D + L+ YA+ DD +FD +++RD +W+VM+ + +A
Sbjct: 22 VHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGD 81
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
F++ + G+ D+ T+ V D+ + +H + + L D + S
Sbjct: 82 HAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCAS 141
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MYA+C VE A+ +F+ M +DL++W M+ Y + A E+L+LFD M+ P+
Sbjct: 142 LVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAY-ADCNAYESLVLFDRMREEGVVPD 200
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V + +V+AC LG+ R + YI+ + +D L A++DMYAKCG +++A +F+
Sbjct: 201 KVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFD 260
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ E+NV SW+ +IA YG HG G+ A++ F ML + P+ +TF S+L ACSHAGLI
Sbjct: 261 RM--KEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLI 318
Query: 432 DEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG + F M + +V+P+VKHY CMVD+LGRAG L EA +I+ M + ++ +W ALL
Sbjct: 319 EEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLG 378
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRIH E AAN L +L+P++ G++VL+SNIYA + KW +V K R+ M + LKK
Sbjct: 379 ACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKI 438
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
++ IE F DR +P KE+Y+ + S+ +++MAGY+PD L DVE+E +
Sbjct: 439 PGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVK 498
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ ML HSEKLA+AFG++ + ++++KNLRVC DCH+ + +S I RR IIVRDANR
Sbjct: 499 QEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANR 558
Query: 666 FHHFEGGTCSCNDYW 680
FHHF GTCSC DYW
Sbjct: 559 FHHFNDGTCSCGDYW 573
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 229/412 (55%), Gaps = 7/412 (1%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL C + +RQ+H+ + +G + Q L + K++ Y + + A SLF+ + S
Sbjct: 9 LLLRCRNVFHIRQVHAHVVANGTL-QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSK 67
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+ W+ M+ +A G + + R G++ ++YT PFV++ C + + G+V+H
Sbjct: 68 T--WSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHD 125
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+++ G LSD +V A+LVDMYAKC +D ++F+ M +DLV+WTVMI AY E
Sbjct: 126 VVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADC-NAYE 184
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+L+LF + ++EG++ D V +V+V +A +LG + +A+ + Y + N F D+ + +++
Sbjct: 185 SLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMID 244
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MYA+CG+VE AR VFD M+++++ISW++M+ Y +G+ +A+ LF M + PN VT
Sbjct: 245 MYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVT 304
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
+ L+ AC++ G + G +F + + ++ D ++D+ + G LD A + +
Sbjct: 305 FVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAM 364
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSA 424
E++ W+ L+ +H A + + +LE + P H S + A
Sbjct: 365 -TVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYA 415
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/718 (35%), Positives = 384/718 (53%), Gaps = 90/718 (12%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I +++ G N AR +F + + +N MI Y++N +EL+ + R+G
Sbjct: 87 LIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFR 146
Query: 108 SNSYTFPFVLKACASNSLILEG----KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+++TF VL A A LI+E + +H ++++G + V AL+ ++ KC +
Sbjct: 147 PDNFTFTSVLGALA---LIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPL 203
Query: 164 GC---------KVFDEMSVRDLVSWTVMITAYEQAEKPE--------------------- 193
K+FDEM+ RD +SWT MI Y + + +
Sbjct: 204 VSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMI 263
Query: 194 ----------EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN--- 240
EAL +F+K G+ D T SV SA G L + VH Y +
Sbjct: 264 SGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPR 323
Query: 241 -AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI----------- 288
+ L + N++ +Y +CG V++AR VF+ M +DL+SWN++L+GY+
Sbjct: 324 PSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSF 383
Query: 289 --------------------QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
QNG E+L LF+ M++ +P + AC +L +
Sbjct: 384 FEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAAL 443
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
GR+ H ++ + NA++ MYAKCG ++ A +F + P +VS WN +IA
Sbjct: 444 MHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTM-PYLDSVS-WNAMIA 501
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVK 447
G HGHG +ALE F ML+E + PD ITF ++LS CSHAGL++EG + F M+ L +
Sbjct: 502 ALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGIC 561
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANY 502
P HYA M+D+L RAG EA DMI+ MP+ P +W ALL CRIHG + AA
Sbjct: 562 PGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAER 621
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
LF+L P+H G +VL+SN+YA +W +V K+R+ M++KG+KK S IE + F
Sbjct: 622 LFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLV 681
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
D V+P + VY +E + ++++ GY+PD LHD+E E +E++L+ HSEKLAV FG+
Sbjct: 682 DDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGL 741
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ L A V+V KNLR+C DCH+AF+F+S + R+I+VRD RFHHF+ G CSC +YW
Sbjct: 742 LKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 196/487 (40%), Gaps = 111/487 (22%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE------------------ 170
+ VH +I +GF Y+ L+D+Y K +FDE
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93
Query: 171 ---------------MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
+ +RD V + MIT Y A+ LF+ + G D+ T
Sbjct: 94 AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153
Query: 216 SVASAVGQL-GDVLKAQAVH--------GY--AICNAFL--------------------- 243
SV A+ + D + Q +H G+ ++ NA L
Sbjct: 154 SVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAA 213
Query: 244 ---------EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
D +++A Y R G ++ AR D M ++ +++WN+M++GY+ +G
Sbjct: 214 RKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFL 273
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS----NMKIDATLR 350
EAL +F +M + + T ++SAC G G++ H YI+ + ++ ++
Sbjct: 274 EALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVN 333
Query: 351 NAVMDMYAKCGDLDTAENMFNDI-----------------------------HPSERNVS 381
NA+ +Y KCG +D A +FN + ERN+
Sbjct: 334 NALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLL 393
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
+W V+I+G +G G ++L+ F++M EG +P F + AC+ + GR+ A +
Sbjct: 394 TWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQL 453
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIA- 499
+L + ++ M + G + A + MP DSV W A++ A HG A
Sbjct: 454 VRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYL--DSVSWNAMIAALGQHGHGAQ 511
Query: 500 ANYLFQL 506
A LF+L
Sbjct: 512 ALELFEL 518
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 132/303 (43%), Gaps = 29/303 (9%)
Query: 19 CNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLW 78
C + RQ+ + + L++ I+ Y G + A+S F + + W
Sbjct: 343 CGKVDEARQVFNQMPVKDLVSWN-----AILSGYVNAGRIDEAKSFFEEMPERNLLT--W 395
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
MI A NG E+L+L++ M+ G Y F + ACA + ++ G+ +H ++R
Sbjct: 396 TVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVR 455
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF S AL+ MYAKCG + +F M D VSW MI A Q +AL L
Sbjct: 456 LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALEL 515
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS----IVA 254
F+ +E +L D +T ++V S G V + H Y + L +C ++
Sbjct: 516 FELMLKEDILPDRITFLTVLSTCSHAGLVEEG---HRYFKSMSGLYGICPGEDHYARMID 572
Query: 255 MYARCGNVEKARLVFDMMEKRDLIS----WNSMLTGYIQNG------QASEALLLFDEMQ 304
+ R G +A+ DM+E + W ++L G +G QA+E LF+ M
Sbjct: 573 LLCRAGKFSEAK---DMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAER--LFELMP 627
Query: 305 NSD 307
D
Sbjct: 628 QHD 630
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/644 (34%), Positives = 363/644 (56%), Gaps = 43/644 (6%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN++ Y N G + L ++ M +G+ + +L AC+ + GK +HG +
Sbjct: 311 WNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV 370
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ G + D +V ALV++YA C + VFD M R++V+W + + Y P++ L
Sbjct: 371 KHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLN 430
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
+F++ G+ D VT++S+ A L D+ + +HG+A+ + +ED+ + N+++++YA
Sbjct: 431 VFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYA 490
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGY------------------------------ 287
+C V +A++VFD++ R++ SWN +LT Y
Sbjct: 491 KCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSV 550
Query: 288 -----IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
++N + EA+ +F +MQ KP+ T ++ AC+ ++G++ H Y+
Sbjct: 551 VIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHW 610
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
D NA++DMYAKCG L + N+F D+ P ++V SWN +I GMHG+G++AL
Sbjct: 611 KDWDLARTNALVDMYAKCGGLSLSRNVF-DMMPI-KDVFSWNTMIFANGMHGNGKEALSL 668
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLG 461
F +ML VKPD TFT +LSACSH+ L++EG + F M++ V+PE +HY C+VD+
Sbjct: 669 FEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYS 728
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAGCL EA+ I++MP+ P W A L CR++ +I+A LF+++P + +V
Sbjct: 729 RAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVT 788
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
+ NI + W E K+R+ MK +G+ K S G + F D+ N ++Y
Sbjct: 789 LFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNF 848
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
++ + +IK AGY PD LHD++ E++ L HSEKLAVAFGI+NL ++ ++V KN
Sbjct: 849 LDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKN 908
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LR+C DCH+A +++S + I+VRD+ RFHHF+ G CSC D+W
Sbjct: 909 LRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/470 (28%), Positives = 241/470 (51%), Gaps = 12/470 (2%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
++Q H T G+++ + +G I Y AR +F+ + + WN++
Sbjct: 59 VKQFHDDATRCGVMSD-VSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVT--WNSLSAC 115
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
Y N G + L ++ M + + +N T +L C+ + GK +HG ++R G + D
Sbjct: 116 YVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVED 175
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V +A V+ YAKC + VFD M RD+V+W + + Y P++ L +F++
Sbjct: 176 VFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVL 235
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+G+ D VT+ + SA L D+ +A+HG+A+ + +E++ + N++V +Y C V +
Sbjct: 236 DGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVRE 295
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A+ VFD+M R++I+WNS+ + Y+ G + L +F EM + KP+P+ ++ AC+
Sbjct: 296 AQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQ 355
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L + G+ HG+ + M D + A++++YA C + A+ +F D+ P RNV +WN
Sbjct: 356 LKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVF-DLMP-HRNVVTWN 413
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
L + Y G +K L F +M+ GVKPD +T SIL ACS + G+ +
Sbjct: 414 SLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRH 473
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLA 491
+ +V ++ + + C+ EA FD+I + + W +L A
Sbjct: 474 GMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREV----ASWNGILTA 519
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 206/396 (52%), Gaps = 3/396 (0%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
E +++Y++ R GI + F V KACA++ L+ K H D R G +SD + A +
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
Y KC + +VFD++ RD+V+W + Y P++ L +F+K + ++ +
Sbjct: 83 HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
T+ S+ L D+ + +HG+ + + +ED+ + ++ V YA+C V +A+ VFD+M
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM 202
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
RD+++WNS+ + Y+ G + L +F EM KP+PVT ++SAC+ L + G+
Sbjct: 203 PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGK 262
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
HG+ + M + + NA++++Y C + A+ +F D+ P RNV +WN L + Y
Sbjct: 263 AIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVF-DLMP-HRNVITWNSLASCYVN 320
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
G +K L F +M GVKPD + +SIL ACS + G+ K + +V
Sbjct: 321 CGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFV 380
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
+V++ C+ EA + MP N W +L
Sbjct: 381 CTALVNLYANCLCVREAQTVFDLMP-HRNVVTWNSL 415
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P EA+ ++ ++ G+ D ++VA A D LK + H A + D+ I N+
Sbjct: 21 PNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNA 80
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ Y +C VE AR VFD + RD+++WNS+ Y+ G + L +F +M + K N
Sbjct: 81 FIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKAN 140
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
P+T ++ C+ L + G++ HG+++ M D + +A ++ YAKC + A+ +F
Sbjct: 141 PLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF- 199
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
D+ P R+V +WN L + Y G +K L F +M+ +GVKPD +T + ILSACS +
Sbjct: 200 DLMP-HRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDL 258
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
G+ K + V +V++ C+ EA + MP
Sbjct: 259 KSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP 304
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
I +G +EA+ ++ + KP+ + + AC ++FH + D
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
++ NA + Y KC ++ A +F+D+ R+V +WN L A Y G ++ L F +M
Sbjct: 76 SIGNAFIHAYGKCKCVEGARRVFDDL--VARDVVTWNSLSACYVNCGFPQQGLNVFRKMG 133
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
VK + +T +SIL CS + G++ + + + +V + V+ + C+
Sbjct: 134 LNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVR 193
Query: 468 EAFDMIKQMP 477
EA + MP
Sbjct: 194 EAQTVFDLMP 203
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/697 (36%), Positives = 392/697 (56%), Gaps = 29/697 (4%)
Query: 4 LGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
L P+ F +L SC +SL R IH+ + G + + + ++ Y G +
Sbjct: 233 LLPNRASFV-AILSSCGDHSSLPLARSIHARVEELGFLGDVV-VATALVTMYGRCGSVDE 290
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA- 119
+ ++F ++ S WN MI A+A GH +Y M++ G N TF LKA
Sbjct: 291 SIAVFEAMAVRNHVS--WNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA 348
Query: 120 CASNSLIL-EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
C+S+S L E +HG I G D V ALV MY G D FD + +++VS
Sbjct: 349 CSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVS 408
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
W M+TAY + EA+ LF +++ L + V+ ++V +G DV +A+++H +
Sbjct: 409 WNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAV---LGCCEDVSEARSIHAEVV 465
Query: 239 CNA-FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
N F ++ I N +V M+AR G++E+A FD +D +SWN+ + A+
Sbjct: 466 GNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAI 525
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDM 356
F MQ+ +P+ T + +V C LG+ +LGR + + ++ D + +AVM+M
Sbjct: 526 TAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNM 585
Query: 357 YAKCGD-LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPD 414
AKCG +D E +F + +++ +WN +IA Y HGHGRKAL+ F M + V+PD
Sbjct: 586 VAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPD 645
Query: 415 HITFTSILSACSHAGLIDEGRKCF---ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
TF S+LS CSHAGL+++G CF ++ + +P V+HYAC+VD+LGR G L EA D
Sbjct: 646 SSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQP-VEHYACLVDVLGRMGYLREAED 704
Query: 472 MIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNK 526
I++MPLP + VW +LL AC +G++ AA +L + +V++SNIYAA+ +
Sbjct: 705 FIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGR 764
Query: 527 WREVGKLREDMKNKGLKK--PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
W + ++REDM + +KK P S++ + + F DR +P +Y ++E + I
Sbjct: 765 WEDSIRVREDMAERRVKKRVPGKSSIVVKNR-VHEFFARDRSHPQSDAIYAELERLKGLI 823
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
+ AGY+PD LHDVE+E +E +L YHSEKLA+AFG++++ ++V KNLRVC DCH
Sbjct: 824 REAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCH 883
Query: 645 SAFRFISYIYRRKIIVRDANRFHHF-EGGTCSCNDYW 680
+A +FI+ + +R+I VRD NRFHHF + G CSC DYW
Sbjct: 884 TATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 256/531 (48%), Gaps = 38/531 (7%)
Query: 15 LLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL+ C LA RQ+H + GL L LG ++ Y+ + A + F+++ +
Sbjct: 30 LLRRCIGDADLAQGRQLHRQIVKQGLARNDL-LGNYLVQMYSKCRSLDDANAAFSALRSR 88
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMR---RSGISSNSYTFPFVLKACASNSL--- 125
+ WNT+I A ++ +LY+ M+ R+ N T VL A AS
Sbjct: 89 GIAT--WNTLIAAQSSPA---AVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSSS 143
Query: 126 -------ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
I + ++VH DI + D +V AL+D Y KCG + +VF + V DL+
Sbjct: 144 SSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLIC 203
Query: 179 WTVMITAYE-QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
W I A E+P+ AL+L ++ EGLL + + V++ S+ G + A+++H
Sbjct: 204 WNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARV 263
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
FL D+ + ++V MY RCG+V+++ VF+ M R+ +SWN+M+ + Q G S A
Sbjct: 264 EELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAF 323
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK--FHGYIINSNMKIDATLRNAVMD 355
++ MQ +PN +T + + A S+ LG HG+I + ++ D + A++
Sbjct: 324 AIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVT 383
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY G +D A F+ I P+ +N+ SWN ++ YG +G R+A+E F+ M + + P+
Sbjct: 384 MYGSTGAIDRARAAFDAI-PA-KNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNK 441
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA-CMVDMLGRAGCLYEAFDMIK 474
+++ ++L C + E R A++ + + A +V M R+G L EA
Sbjct: 442 VSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFD 498
Query: 475 QMPLPPNDSV-WGALLLACR----IHGEIAANYLFQLEPEHTGYFVLMSNI 520
+ DSV W + A +HG I A Y Q E F L+S +
Sbjct: 499 ATVV--KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVV 547
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 189/455 (41%), Gaps = 66/455 (14%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T +L+ C ++ + +G+ +H I++ G + + LV MY+KC DD F +
Sbjct: 26 TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS---DSVTIVSVASAVGQLGD-- 226
R + +W +I A P L+ + + E + +TI++V A+ GD
Sbjct: 86 RSRGIATWNTLIAAQ---SSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIAS-GDPS 141
Query: 227 ---------VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
+ +A+ VH + DL + +++ Y +CG VE A VF ++ DL
Sbjct: 142 SSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDL 201
Query: 278 ISWNSMLTGYIQNGQASE-ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
I WN+ + N + + ALLL M PN + + ++S+C S L R H
Sbjct: 202 ICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHA 261
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
+ D + A++ MY +CG +D + +F + + RN SWN +IA + GH
Sbjct: 262 RVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAM--AVRNHVSWNAMIAAFAQCGHR 319
Query: 397 RKALEFFSQMLEEGVKPDHITF-TSILSACSHA--------------------------- 428
A + +M +EG +P+ ITF T++ +ACS +
Sbjct: 320 SAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGT 379
Query: 429 ---------GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
G ID R F + ++ D GRA E F +K+ L
Sbjct: 380 ALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDN-GRAREAMELFAAMKRQSLA 438
Query: 480 PNDSVWGALLLACR-------IHGEIAANYLFQLE 507
PN + A+L C IH E+ N LF E
Sbjct: 439 PNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQE 473
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/569 (36%), Positives = 349/569 (61%), Gaps = 7/569 (1%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ ACA + + + + +HG + + F D+++ +L+ +Y KCG + KVFD+M +D+
Sbjct: 58 ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT +I Y Q + P EA+ L + + T S+ A G D +H
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHAL 177
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
A+ + ED+ + ++++ MYARCG ++ A VFD ++ ++ +SWN++++G+ + G A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L++F EMQ + + T + S +G+ + G+ H +++ S K+ A + N ++DM
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDM 297
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAK G + A +F + +++ +WN ++ + +G G++A+ F +M + G+ + I
Sbjct: 298 YAKSGSMIDARKVFERV--LNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQI 355
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
TF IL+ACSH GL+ EG+ F + + +++PE++HY +VD+LGRAG L A I +M
Sbjct: 356 TFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKM 415
Query: 477 PLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
P+ P +VWGALL ACR+H G+ AA+++FQL+P+ +G VL+ NIYA++ W
Sbjct: 416 PMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAA 475
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
++R+ MK G+KK A S +E G + F D +P +E+YK + ++++I+ GY+P
Sbjct: 476 RVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVP 535
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
D+ L V++++RE L YHSEK+A+AF ++ + A +++ KN+R+C DCHSAF++IS
Sbjct: 536 DMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYIS 595
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ R+I+VRD NRFHHF G+CSC DYW
Sbjct: 596 KVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 196/397 (49%), Gaps = 8/397 (2%)
Query: 4 LGPSTEGFYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
L P T Y + +C L R+IH L +S A L +I Y G
Sbjct: 47 LAP-TPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAF-LDNSLIHLYCKCGSVVE 104
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +F+ + S W ++I YA N E + L M + N +TF +LKA
Sbjct: 105 AHKVFDKMRKKDMVS--WTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAA 162
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ + G +H ++ + D YV +AL+DMYA+CG+ D VFD++ ++ VSW
Sbjct: 163 GAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I+ + + E AL++F + Q+ G + T S+ S + +G + + + VH + + +
Sbjct: 223 ALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKS 282
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ N+++ MYA+ G++ AR VF+ + +DL++WNSMLT + Q G EA+ F
Sbjct: 283 RQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHF 342
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+EM+ S N +T L +++AC++ G + G+ + I N++ + V+D+ +
Sbjct: 343 EEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRA 402
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
G L+ A +F P E + W L+A MH + +
Sbjct: 403 GLLNYAL-VFIFKMPMEPTAAVWGALLAACRMHKNAK 438
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 5/202 (2%)
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
D + + + P P ++AC + RK HG++ +S + DA L N+++ +Y K
Sbjct: 39 LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK 98
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG + A +F+ + ++++ SW LIAGY + +A+ ML+ KP+ TF
Sbjct: 99 CGSVVEAHKVFDKM--RKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFA 156
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
S+L A G + A K +V + ++DM R G + A + ++
Sbjct: 157 SLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-S 215
Query: 480 PNDSVWGALL--LACRIHGEIA 499
N W AL+ A + GE A
Sbjct: 216 KNGVSWNALISGFARKGDGETA 237
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/587 (37%), Positives = 350/587 (59%), Gaps = 14/587 (2%)
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
RR IS T+ +LK CA + +LEGK VH +++ G+ SD + L++MY KCG
Sbjct: 20 RREEIS----TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGI 75
Query: 162 DDGCKVFDEMSVR--DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
+ VFD++ + D++SW +I AY Q +EAL LF+ EG++++ VT+++
Sbjct: 76 AEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAID 135
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
A L + + VH A+ D + S+V M+ +C NV+ AR VFD + +++L++
Sbjct: 136 ACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVT 195
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN+M+ Y QN Q +A+ +F M +P+ VT L ++ AC L + GR H I
Sbjct: 196 WNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDIT 255
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
S + +D L AVM Y KCG LD A +F+ + ++N +W+ ++A Y +G+ +A
Sbjct: 256 ASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSL--GKKNTVTWSAILAAYAQNGYETEA 313
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVD 458
+E + +M++ G++ + ITF +L ACSHAG +G F M + V P +HY ++D
Sbjct: 314 IELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLID 373
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGY 513
+LGR+G L + D+I MP P+ S W ALL ACR+HG++ A +++L+PE +G
Sbjct: 374 LLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGP 433
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
++L+SN+Y+++ + E + R+ M+ +G+ K S IE + F A +++P +
Sbjct: 434 YILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRI 493
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
+ ++E + +K AGY+ D+ L DVE+E++E +L YHSE+LA+AFG+++ P + +
Sbjct: 494 HAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHI 553
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH+A + IS + RKI+VRDA RFHHFE G CSC DYW
Sbjct: 554 VKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 215/433 (49%), Gaps = 15/433 (3%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LLK C +L +++HS L G + L + +I Y G ARS+F+ I
Sbjct: 27 YVLLLKKCADSKALLEGKRVHSCLVKDGYASDRL-IANLLIEMYGKCGGIAEARSVFDQI 85
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ WN +I AY NG E L L+ TM G+ +N T + ACAS E
Sbjct: 86 QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G++VH + SD+ V +LV+M+ KC D VFD + ++LV+W M+ Y Q
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ ++A+ +F+ EG+ D+VT +++ A L + + VH + D+ +
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+++ Y +CG ++ AR +FD + K++ ++W+++L Y QNG +EA+ L+ EM
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTA 366
+ N +T L L+ AC++ G G + +I + + + ++D+ + G L +
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDYFVSMIR-DFGVVPVFEHYLNLIDLLGRSGQLQLS 384
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHG---HGRKALEFFSQMLEEGVKPDHITFTSILS 423
E++ N + P E + S+W L+ MHG G + E ++ E P +I +++ S
Sbjct: 385 EDLINSM-PYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGP-YILLSNLYS 442
Query: 424 ACSHAGLIDEGRK 436
+ G +DE R+
Sbjct: 443 S---TGRMDEARR 452
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/691 (33%), Positives = 383/691 (55%), Gaps = 56/691 (8%)
Query: 2 RRLGPS--TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
R GPS E + L+ + N L L QIH+ + L + + + ++I + +
Sbjct: 31 RAHGPSRSPETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNS-RVVTQLISSSCSLKSLD 89
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
A S+F D F++N +IR A N ++ + M R I + T PFVLK+
Sbjct: 90 YALSIFRCF--DHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKS 147
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD---- 175
A+ + G+ +HG +++ G DS+V+ +LVDMY K G+ G ++FDE R+
Sbjct: 148 VAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAES 207
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
++ W V+I + +A LF+ + S
Sbjct: 208 ILLWNVLINGCCKVGDLSKAASLFEAMPERNAGS-------------------------- 241
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
NS++ + R G++++AR +F M +++++SW +M+ G+ QNG +
Sbjct: 242 -------------WNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEK 288
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL +F M +PN +T + + ACT +G+ Q+G + H Y+ ++ +++ + A++D
Sbjct: 289 ALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVD 348
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAKCG++ +A +F + +++ +W+V+I G+ +HG +AL+ F +M G+ PD
Sbjct: 349 MYAKCGNIKSASRVF--VETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDE 406
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+ F +IL+ACSH+G +D+G F M S++P +KHY +VD+LGRAG L EA I+
Sbjct: 407 VIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQ 466
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
MP+ P+ +WGAL ACR H E+ A L QLEP+H G +V +SN+YAA +W +
Sbjct: 467 SMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWED 526
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V ++R MKN+G++K +S IE + F D + +E+ K+E + K GY
Sbjct: 527 VERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGY 586
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
MP+ + LH++E+E++E L HSEKLA+AFG+++ P + +++ KNLRVC DCHS ++
Sbjct: 587 MPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKY 646
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S + RR+II+RD RFHHF+ GTCSC DYW
Sbjct: 647 ASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/665 (34%), Positives = 377/665 (56%), Gaps = 16/665 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H+ + + L +I Y+ P +AR + S W +++
Sbjct: 26 RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVS--WTSLVSGL 83
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A NGH L + MRR G++ N +TFP V KA AS L + GK +H ++ G + D
Sbjct: 84 AQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V + DMY K DD K+FDE+ R+L +W I+ +P+EA+ F + ++
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRI 203
Query: 206 GLLSDSVTIVSVASAV--GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
G +S+T +A G L D+ +HG + F D+ + N ++ Y +C +
Sbjct: 204 GGQPNSITFCGFLNACSDGLLLDL--GMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+ ++F M ++ +SW S++ Y+QN + +A +L+ + + + ++SAC
Sbjct: 262 SSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACA 321
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ +LGR H + + + ++ + + +A++DMY KCG ++ +E F+++ E+N+ +
Sbjct: 322 GMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEM--PEKNLVTL 379
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGV--KPDHITFTSILSACSHAGLIDEGRKCFADM 441
N LI GY G AL F M G P+++TF S+LSACS AG ++ G K F M
Sbjct: 380 NSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
Query: 442 -TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE--- 497
+ ++P +HY+C+VDMLGRAG + +AF+ IK+MP+ P SVWGAL ACR+HG+
Sbjct: 440 KSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHL 499
Query: 498 --IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
+AA LF+L+P+ +G VL+SN +AA+ +W E +RE+MK G+KK A +S I
Sbjct: 500 GILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKN 559
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F DR + KE+ + + +++ AGY PDL +L+D+E+E++ +++HSEK
Sbjct: 560 QVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEK 619
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AFG++ L +++TKNLR+C DCHS F+F+S +R+IIVRD NRFH F+ G CS
Sbjct: 620 LALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICS 679
Query: 676 CNDYW 680
C DYW
Sbjct: 680 CKDYW 684
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 177/364 (48%), Gaps = 3/364 (0%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
+LK S S + G+VVH I++T ++ L++MY+K + V
Sbjct: 11 LLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
R++VSWT +++ Q AL F + ++EG+ + T V AV L + + +
Sbjct: 71 RNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQI 130
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H A+ + D+ + S MY + + AR +FD + +R+L +WN+ ++ + +G+
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRP 190
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EA+ F E + +PN +T ++AC+ LG + HG + S D ++ N +
Sbjct: 191 KEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGL 250
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+D Y KC + ++E +F ++ +N SW L+A Y + KA + + +E V+
Sbjct: 251 IDFYGKCKQIRSSEIIFAEM--GMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVET 308
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+S+LSAC+ ++ GR A K V+ + + +VDM G+ GC+ ++
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 474 KQMP 477
+MP
Sbjct: 369 DEMP 372
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/689 (35%), Positives = 393/689 (57%), Gaps = 17/689 (2%)
Query: 2 RRLGPSTEGF-YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGE 57
R LG + + +L++C L S+ + IH + G I + + + ++ Y +
Sbjct: 267 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG-IKKDVIVNNGLLSMYCKFNG 325
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
R +F+ + + S WNTMI Y+ G E+++L+ M + T +L
Sbjct: 326 LIDGRRIFDKMVLRDAVS--WNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSIL 382
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
+AC + GK VH +I +G+ D+ L++MYAKCG +VF M +D V
Sbjct: 383 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 442
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
SW MI Y Q +EA+ LF K + + DSVT V + S QLGD+ + +H
Sbjct: 443 SWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDL 501
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
F ++ + N++V MYA+CG + + VF+ M+ RD+I+WN+++ + + + L
Sbjct: 502 AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGL 561
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
+ M+ P+ T L ++ C+ L +++ G++ HG I ++ D + N +++MY
Sbjct: 562 RMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 621
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHIT 417
+KCG L + +F + ++V +W LI+ GM+G G+KA+ F +M G+ PDH+
Sbjct: 622 SKCGSLRNSFQVFKLMKT--KDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 679
Query: 418 FTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
F +I+ ACSH+GL++EG F M K ++P ++HYAC+VD+L R+ L +A D I M
Sbjct: 680 FVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM 739
Query: 477 PLPPNDSVWGALLLACRIHG--EIA---ANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
PL P+ S+WGALL ACR+ G EIA + + +L P+ TGY+VL+SN+YAA KW +V
Sbjct: 740 PLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVR 799
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
+R+ +K +GLKK S +E + F T + + ++EV K + +A + GY+
Sbjct: 800 SIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIA 859
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
+L LHD++++++ +L HSE+LA+AFG++N P +QV KNLRVC DCH+ ++IS
Sbjct: 860 NLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYIS 919
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I +R+++VRDANRFH F+ G CSC DYW
Sbjct: 920 KIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 262/482 (54%), Gaps = 8/482 (1%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L S L ++HS + T GL + ++ AK+I KY + +P ++ S+F + + +
Sbjct: 82 LASAATTTQLHKLHSLIITLGL-HHSVIFSAKLIAKYAHFRDPTSSFSVFR-LASPSNNV 139
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
+ WN++IRA +NG E L LYS +R + ++YTFP V+ ACA K +H
Sbjct: 140 YXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDR 199
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
++ GF SD Y+ AL+DMY + D KVF+EM +RD+VSW +I+ Y EA
Sbjct: 200 VLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEA 259
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
L ++ + + G++ DS T+ SV A G LG V + +HG +D+ + N +++M
Sbjct: 260 LEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 319
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y + + R +FD M RD +SWN+M+ GY Q G E++ LF EM N KP+ +T
Sbjct: 320 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTI 378
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++ AC +LG + G+ H Y+I S + D T N +++MYAKCG+L ++ +F+ +
Sbjct: 379 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 438
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
++ SWN +I Y +G +A++ F +M++ VKPD +T+ +LS + G + G+
Sbjct: 439 --KDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGK 495
Query: 436 KCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
+ D+ K+ + +VDM + G + ++ + + M + W ++ +C +H
Sbjct: 496 ELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTIIASC-VH 553
Query: 496 GE 497
E
Sbjct: 554 SE 555
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/681 (35%), Positives = 382/681 (56%), Gaps = 51/681 (7%)
Query: 9 EGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP-NTARSLFNS 67
E + LL C+ L +QIH+ + +GL L G ++ T + + A LF+
Sbjct: 2 EEAWVSLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHH 61
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLI 126
N + F+ NT+IR+ + + + +L + +RR +S +S+TF F LKA A++ +
Sbjct: 62 FPNPDT--FMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHL 119
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
G +H R GF + +V L+ MYA+CG + +VFDEMS ++V+W ++TA
Sbjct: 120 RPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTA- 178
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ GDV AQ V G C + +L
Sbjct: 179 ----------------------------------AFRCGDVEGAQDVFG---CMP-VRNL 200
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
N ++A YA+ G + AR VF M RD +SW++M+ G+ NG EA F E+
Sbjct: 201 TSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLRE 260
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ + N V+ ++SAC G+ + G+ HG++ + ++ NA++D Y+KCG++ A
Sbjct: 261 EIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMA 320
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F ++ P R++ SW +IAG MHG G +A++ F +M E GV+PD ITF S+L ACS
Sbjct: 321 RLVFQNM-PVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACS 379
Query: 427 HAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL++EG F+ M L ++P ++HY CMVD+ GRA L +A++ I +MP+ PN +W
Sbjct: 380 HSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIW 439
Query: 486 GALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
LL AC IHG E+ L +++P+++G VL+SN+YA + KW++V +R M
Sbjct: 440 RTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEH 499
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM-AGYMPDLSCALHD 599
+KK +S+IE K I GF ++ N +E ++K+ + + ++ AGY P L LHD
Sbjct: 500 SMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHD 559
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
+E+E++E ++ HSEKLA AFGI L ++++ KNLRVC DCH+ + IS +Y+ +II
Sbjct: 560 IEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEII 619
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRD +RFH F+ G CSC DYW
Sbjct: 620 VRDRSRFHSFKDGFCSCRDYW 640
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/587 (38%), Positives = 357/587 (60%), Gaps = 17/587 (2%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M R+ + + +F +L++CA + G+ H I++ GF D +Q L+D YAK G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
+VF M RD+V+ MI+A + EEA LF + +S + S+ +
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITC 116
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM-EKRDLIS 279
+LGD+ A+ + CN ++D+ N+I+ Y + + A+ +F +M R+ ++
Sbjct: 117 YCKLGDINSARLMFD---CNP-VKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVT 172
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN+M++ Y+Q G+ A+ +F +MQ+ + KP VT + L+SAC +LG+ +G HGYI
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 232
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+KID L NA++DMY KCG L+ A ++F+ + S +N+ WN +I G GM+G G +A
Sbjct: 233 TKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGL--SRKNIFCWNSIIVGLGMNGRGEEA 290
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
+ F M +EG+KPD +TF ILS CSH+GL+ G++ F++M + ++P V+HY CMVD
Sbjct: 291 IAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVD 350
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LGRAG L EA ++I+ MP+ PN V G+LL AC+IH GE L +L+P G
Sbjct: 351 LLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGN 410
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+V +SN+YA+ ++W +V R+ M +G+ K S IE + F D +P + ++
Sbjct: 411 YVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQI 470
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
++ +A E+K G++P+ + LHD+E+E++E + YHSE++AVAFG+M+ P ++V
Sbjct: 471 NAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRV 530
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR C+DCHSA + IS ++R+IIVRD RFHHF G+CSCNDYW
Sbjct: 531 VKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 1/184 (0%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
II Y + A+ LF + + ++ S WNTMI AY G + ++ M+ +
Sbjct: 144 IIDGYCKSKQLVAAQELFLLMGSARN-SVTWNTMISAYVQCGEFGTAISMFQQMQSENVK 202
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
T +L ACA + G+ +HG I D + AL+DMY KCG + V
Sbjct: 203 PTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDV 262
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F +S +++ W +I + EEA+ F ++EG+ D VT V + S G +
Sbjct: 263 FHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLL 322
Query: 228 LKAQ 231
Q
Sbjct: 323 SAGQ 326
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Query: 8 TEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
TE LL +C L +L IH + T L + LG +I Y G A +
Sbjct: 204 TEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVV-LGNALIDMYCKCGALEAAIDV 262
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + + F WN++I NG E + + M + GI + TF +L C+ +
Sbjct: 263 FHGL--SRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSG 320
Query: 125 LILEGKVVHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
L+ G+ +++ G +VD+ + G + ++ M ++
Sbjct: 321 LLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 371
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/601 (36%), Positives = 353/601 (58%), Gaps = 42/601 (6%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L++C + S + K++H +IR + D + + L+ + D +VF ++ +L
Sbjct: 22 LESCTTLSHL---KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
+ I + ++ P+++ + ++++ GL+ D++T + A Q G + HG
Sbjct: 79 FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
I + F D+ +QNS+V MY+ G+++ A VF + D++SW SM+ GYI++G + A
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSA 198
Query: 297 LLLFDEM-------------------------------QNSDCKPNPVTALILVSACTYL 325
LFD+M Q+ N + ++++C +L
Sbjct: 199 RKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHL 258
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G+ +LG + H YI+ + M ++ L A++DMYA+CG +D A +F+ + P R+ SW
Sbjct: 259 GALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQL-PG-RDALSWTT 316
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-L 444
LIAG+ MHG+ KALE+FS+M + G+ P ITFT++LSACSH GL++ G + F M +
Sbjct: 317 LIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDY 376
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
++P ++HY CMVD+LGRAG L EA + +MP+ PN +WGALL ACRIH E A
Sbjct: 377 RIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERA 436
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
L +L+PEH+GY+VL+SNIYA +NKW V +R+ MK +G+ KP +++ E +
Sbjct: 437 GKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHK 496
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F D+ +P +++ + E + +I++AGY + AL D+++E++E ++ HSEKLA+A
Sbjct: 497 FTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEKESNIHRHSEKLAIA 556
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
+ IM +++ KNLRVC DCH+A + IS +Y R++IVRD NRFHHF+GG CSC DY
Sbjct: 557 YAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNRFHHFKGGACSCMDY 616
Query: 680 W 680
W
Sbjct: 617 W 617
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 214/442 (48%), Gaps = 40/442 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L+SC L+ L+ IH+ L + I I I + A +F I N
Sbjct: 21 FLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINK-NLLDYAAQVFYQIQNPNL- 78
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
F++N+ IR ++ + ++ Y +R+G+ ++ T+PF++KAC + G HG
Sbjct: 79 -FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHG 137
Query: 135 DIIRTGFLSDSYVQAALVDMYA-------------------------------KCGQTDD 163
IIR GF SD YVQ +LV MY+ K G
Sbjct: 138 QIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTS 197
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
K+FD+M ++LV+W+VMI+ Y + ++A+ L+ Q EG+ ++ +VSV ++
Sbjct: 198 ARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAH 257
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
LG + + H Y + N +L + ++V MYARCG+++KA VFD + RD +SW ++
Sbjct: 258 LGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTL 317
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ G+ +G A +AL F M+ + P +T ++SAC++ G + G + + +
Sbjct: 318 IAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFES-MKRDY 376
Query: 344 KIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+I+ L + ++D+ + G L AE N++ P + N W L+ +H + A
Sbjct: 377 RIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEM-PMKPNAPIWGALLGACRIHKNSEIAER 435
Query: 402 FFSQMLEEGVKPDHITFTSILS 423
++E +KP+H + +LS
Sbjct: 436 AGKTLIE--LKPEHSGYYVLLS 455
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
NP L + +CT L ++ H ++I ++ D + ++ + LD A +F
Sbjct: 16 NP--KLSFLESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVF 70
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
I N+ +N I G+ K+ F+ Q G+ PD++T+ ++ AC+ G
Sbjct: 71 YQIQNP--NLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGS 128
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+D G + + + +V +V M G + A + +++ S W +++
Sbjct: 129 LDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVS-WTSMVA 187
Query: 491 ACRIHGEI-AANYLFQLEPE 509
G++ +A LF PE
Sbjct: 188 GYIKSGDVTSARKLFDKMPE 207
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/665 (35%), Positives = 395/665 (59%), Gaps = 15/665 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+++H+ L SGL++ + +G ++ Y + A S+F + + + S WN+MI
Sbjct: 475 QEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVS--WNSMISGL 532
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+N E + + TM+R+G+ ++++ L +C+S + G+ +HG+ + G D
Sbjct: 533 DHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDV 592
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE-EALILFQKTQQ 204
V AL+ +YA+ ++ KVF +M D VSW I A + E +AL F + Q
Sbjct: 593 SVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQ 652
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G + VT +++ +AV + +H + + +D I+N+++A Y +C +E
Sbjct: 653 AGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMED 712
Query: 265 ARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
++F M E+RD +SWNSM++GY+ +G +A+ L M K + T ++SAC
Sbjct: 713 CEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACA 772
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ + + G + H + + ++ D + +A++DMYAKCG +D A F ++ P RN+ SW
Sbjct: 773 SVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFF-ELMPV-RNIYSW 830
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I+GY HGHG+KAL+ F++M + G PDH+TF +LSACSH GL+DEG K F M +
Sbjct: 831 NSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGE 890
Query: 444 L-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC-RIHG----- 496
+ + P ++H++CMVD+LGRAG + + D IK MP+ PN +W +L AC R +G
Sbjct: 891 VYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTEL 950
Query: 497 -EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
+ AA L +LEP++ +VL+SN++AA W +V + R M+ +KK A S +
Sbjct: 951 GQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKD 1010
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D+ +P +++Y+K++ + +I+ AGY+P+ AL+D+E E++E +L+YHSEK
Sbjct: 1011 GVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEK 1070
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AF ++ E +++ KNLRVC DCH+AF++IS I R+II+RD+NRFHHF GG CS
Sbjct: 1071 LAIAF-VLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCS 1129
Query: 676 CNDYW 680
C DYW
Sbjct: 1130 CGDYW 1134
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 207/404 (51%), Gaps = 19/404 (4%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS----SNSY 111
G + A +F+ I S + WN++I Y G V +L+S M+ G+ N Y
Sbjct: 293 GSIDDAHRVFDEIKFRNSVT--WNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEY 350
Query: 112 TF-PFVLKAC--ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
T V AC A L+L +++ I ++GFL D YV +ALV+ +A+ G D +F
Sbjct: 351 TLCSLVTAACSLADCGLVLLEQML-TRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIF 409
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV- 227
+M R+ V+ ++ + + EEA +F K ++ + +S ++V + S + ++
Sbjct: 410 KQMYDRNAVTMNGLMVGLARQHQGEEAAKVF-KEMKDLVEINSESLVVLLSTFTEFSNLK 468
Query: 228 ---LKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
K Q VH Y + ++ + I N++V MY +C ++ A VF +M +D +SWNSM
Sbjct: 469 EGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSM 528
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
++G N + EA+ F M+ + P+ + + +S+C+ LG LGR+ HG +
Sbjct: 529 ISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGL 588
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH-GHGRKALEF 402
+D ++ NA++ +YA+ ++ + +F E + SWN I + +AL++
Sbjct: 589 DLDVSVSNALLTLYAETDSINECQKVF--FQMPEYDQVSWNSFIGALAKYEASVLQALKY 646
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
F +M++ G +P+ +TF +IL+A S ++ G + A + K SV
Sbjct: 647 FLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSV 690
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 226/477 (47%), Gaps = 24/477 (5%)
Query: 17 KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
K+ + L +H L +G + I I Y G +AR LF+ + S
Sbjct: 151 KTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINI-YVRIGNLVSARKLFDEMPQKNLVS- 208
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC--ASNSLILEGKVVHG 134
W+ +I Y N E L+ + SG+ N + L+AC ++ I G +H
Sbjct: 209 -WSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHA 267
Query: 135 DIIRTGFLSDSYVQAALVDMYAKC-GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
I + +SD + L+ MY+ C G DD +VFDE+ R+ V+W +I+ Y +
Sbjct: 268 FICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAV 327
Query: 194 EALILFQKTQQEG----LLSDSVTIVSVASAVGQLGD---VLKAQAVHGYAICNAFLEDL 246
A LF Q EG L + T+ S+ +A L D VL Q + + FL DL
Sbjct: 328 SAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEK-SGFLRDL 386
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ +++V +AR G ++ A+++F M R+ ++ N ++ G + Q EA +F EM++
Sbjct: 387 YVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL 446
Query: 307 DCKPNPVTALILVSACTYLGS----RQLGRKFHGYIINSNMKIDA--TLRNAVMDMYAKC 360
+ N + ++L+S T + ++ G++ H Y+ S + +DA ++ NA+++MY KC
Sbjct: 447 -VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGL-VDARISIGNALVNMYGKC 504
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
+D A ++F + PS+ V SWN +I+G + +A+ F M G+ P + + S
Sbjct: 505 TAIDNACSVFQ-LMPSKDTV-SWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVIS 562
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
LS+CS G + GR+ + K + +V ++ + + E + QMP
Sbjct: 563 TLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP 619
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 185/382 (48%), Gaps = 14/382 (3%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
L SC+ L L RQIH GL + + + ++ Y N + +F +
Sbjct: 564 LSSCSSLGWLTLGRQIHGEGFKWGL-DLDVSVSNALLTLYAETDSINECQKVFFQMPEYD 622
Query: 73 SYSFLWNTMIRAYAN-NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN+ I A A ++ L+ + M ++G N TF +L A +S S++ G
Sbjct: 623 QVS--WNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQ 680
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS-VRDLVSWTVMITAYEQAE 190
+H I++ D+ ++ AL+ Y KC Q +D +F MS RD VSW MI+ Y +
Sbjct: 681 IHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSG 740
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+A+ L Q G D T +V SA + + + VH A+ D+ + +
Sbjct: 741 ILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGS 800
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MYA+CG ++ A F++M R++ SWNSM++GY ++G +AL +F M+ P
Sbjct: 801 ALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSP 860
Query: 311 NPVTALILVSACTYLGSRQLGRKFH---GYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+ VT + ++SAC+++G G K G + + +I+ + ++D+ + GD+ E
Sbjct: 861 DHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHF--SCMVDLLGRAGDVKKIE 918
Query: 368 NMFNDIHPSERNVSSWNVLIAG 389
+ F P + N+ W ++
Sbjct: 919 D-FIKTMPMDPNILIWRTVLGA 939
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 186/383 (48%), Gaps = 20/383 (5%)
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
++S + + +H + +TGF D + L+++Y + G K+FDEM ++LVSW+
Sbjct: 152 TSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSC 211
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD--VLKAQAVHGYAIC 239
+I+ Y Q P+EA LF+ GLL + + S A Q G + +H +
Sbjct: 212 LISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICK 271
Query: 240 NAFLEDLCIQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
+ D+ + N +++MY+ C G+++ A VFD ++ R+ ++WNS+++ Y + G A A
Sbjct: 272 LPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFK 331
Query: 299 LFDEMQNS----DCKPNPVTALILVSACTYLG--SRQLGRKFHGYIINSNMKIDATLRNA 352
LF MQ + +PN T LV+A L L + I S D + +A
Sbjct: 332 LFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSA 391
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
+++ +A+ G +D A+ +F ++ +RN + N L+ G G +A + F +M ++ V+
Sbjct: 392 LVNGFARYGLMDCAKMIFKQMY--DRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVE 448
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKL-----SVKPEVKHYACMVDMLGRAGCLY 467
+ + +LS + + EG++ ++ V + +V+M G+ +
Sbjct: 449 INSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAID 508
Query: 468 EAFDMIKQMPLPPNDSV-WGALL 489
A + + M P D+V W +++
Sbjct: 509 NACSVFQLM--PSKDTVSWNSMI 529
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/684 (34%), Positives = 393/684 (57%), Gaps = 25/684 (3%)
Query: 16 LKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
L SC SLR +IH + S L + ++ Y G + A+ +F + +
Sbjct: 152 LGSCGDPESLRDGIRIHQMVVDSRLEIDP-KVSNALLNMYKKCGSLSHAKRVFAKMERTR 210
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+ W+ M A+A +G+ E L + M GI + +L AC+S +L+ +G+++
Sbjct: 211 NV-ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLI 269
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAE 190
H I +GF S+ V A++ MY +CG ++ KVFD M ++RD+VSW +M++AY +
Sbjct: 270 HSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHND 329
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+ ++A+ L+Q+ Q L +D VT VS+ SA DV + +H + + +++ + N
Sbjct: 330 RGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGN 386
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM------- 303
++V+MYA+CG+ +AR VFD ME+R +ISW ++++ Y++ +EA LF +M
Sbjct: 387 ALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNG 446
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ KP+ + + +++AC + + + G+ + + D + AV+++Y KCG++
Sbjct: 447 SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 506
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ +F+ + S +V WN +IA Y G +AL+ F +M EGV+PD +F SIL
Sbjct: 507 EEGRRIFDGV-CSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILL 565
Query: 424 ACSHAGLIDEGRKCFADMTK--LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
ACSH GL D+G+ F MT +V ++H+ C+ D+LGR G L EA + ++++P+ P+
Sbjct: 566 ACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPD 625
Query: 482 DSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRED 536
W +LL ACR H ++ AN L +LEP +V +SNIYA KW V K+R+
Sbjct: 626 AVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKF 685
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCA 596
M +G+KK S IE GK + F T D +P +E+ +++ + ++K GY+PD
Sbjct: 686 MAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMV 745
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
LH V+++++E +L HSE+LA+A G+++ ++VTKNLRVC+DCH+A + IS I R
Sbjct: 746 LHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGR 805
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
KI+VRD RFH F+ G CSC DYW
Sbjct: 806 KIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 208/419 (49%), Gaps = 13/419 (3%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA-LVDMYAKCG 159
+ + + + + T+ +L+ CA + EG+ +H ++ L + + +V MYA C
Sbjct: 34 LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
D FD + R+L SWT ++ A+ + + +E L ++ +Q+G+ D+VT ++
Sbjct: 94 SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK-RDLI 278
+ G + +H + + D + N+++ MY +CG++ A+ VF ME+ R++I
Sbjct: 154 SCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVI 213
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
SW+ M + +G EAL F M K + ++SAC+ Q GR H I
Sbjct: 214 SWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCI 273
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
S + + + NAVM MY +CG ++ A +F+ + + R+V SWN++++ Y + G+
Sbjct: 274 ALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKD 333
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
A++ + +M ++ D +T+ S+LSACS A + GR + ++ V +V
Sbjct: 334 AIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVS 390
Query: 459 MLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQ--LEPEHTG 512
M + G EA FD ++Q + ++ A + R+ E A +LFQ LE E G
Sbjct: 391 MYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRR-RLVAE--ACHLFQQMLELEKNG 446
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 166/329 (50%), Gaps = 7/329 (2%)
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGN 261
+++ + +++ T + + + + + +H A+ + L +L + N IV+MYA C +
Sbjct: 35 EKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDS 94
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
A+ FD +E+R+L SW ++ + +GQ+ E L + M+ +P+ VT + + +
Sbjct: 95 PGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGS 154
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C S + G + H +++S ++ID + NA+++MY KCG L A+ +F + + RNV
Sbjct: 155 CGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERT-RNVI 213
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SW+++ + +HG+ +AL F ML G+K +ILSACS L+ +GR + +
Sbjct: 214 SWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCI 273
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAAN 501
+ E+ ++ M GR G + EA + M D V ++L+ +H + +
Sbjct: 274 ALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKD 333
Query: 502 YL-----FQLEPEHTGYFVLMSNIYAASN 525
+ QL + Y L+S +A +
Sbjct: 334 AIQLYQRMQLRADKVTYVSLLSACSSAED 362
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/663 (34%), Positives = 378/663 (57%), Gaps = 18/663 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ + +GL ++ + + +I Y G AR LF+ + WN+MI YA
Sbjct: 215 QVHTVVVKNGL-DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT--WNSMISGYA 271
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG +E L ++ +MR + + + +F V+K CA+ + + +H +++ GFL D
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMS-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL+ Y+KC D ++F E+ V ++VSWT MI+ + Q + EEA+ LF + +++
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + T + +A+ V+ VH + + + +++ Y + G VE+A
Sbjct: 392 GVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF ++ +D+++W++ML GY Q G+ A+ +F E+ KPN T +++ C
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 326 -GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
S G++FHG+ I S + + +A++ MYAK G++++AE +F E+++ SWN
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK--RQREKDLVSWN 565
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
+I+GY HG KAL+ F +M + VK D +TF + +AC+HAGL++EG K F M +
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
+ P +H +CMVD+ RAG L +A +I+ MP P ++W +L ACR+H G +
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRL 685
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
AA + ++PE + +VL+SN+YA S W+E K+R+ M + +KK +S IE
Sbjct: 686 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 745
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F DR +P ++Y K+E ++ +K GY PD S L D++DE +E +L HSE+LA+
Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAI 805
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG-GTCSCN 677
AFG++ + + + KNLRVC DCH + I+ I R+I+VRD+NRFHHF G CSC
Sbjct: 806 AFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCG 865
Query: 678 DYW 680
D+W
Sbjct: 866 DFW 868
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 191/364 (52%), Gaps = 3/364 (0%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +LF+ S++ +++ ++ +G E L+ + R G+ + F VLK
Sbjct: 46 AHNLFDKSPGRDRESYI--SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A+ L G+ +H I+ GFL D V +LVD Y K DG KVFDEM R++V+WT
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I+ Y + +E L LF + Q EG +S T + + + G + VH + N
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ + + NS++ +Y +CGNV KAR++FD E + +++WNSM++GY NG EAL +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
M+ + + + + ++ C L + + H ++ D +R A+M Y+KC
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
+ A +F +I NV SW +I+G+ + +A++ FS+M +GV+P+ T++
Sbjct: 344 TAMLDALRLFKEI-GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 421 ILSA 424
IL+A
Sbjct: 403 ILTA 406
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 140/315 (44%), Gaps = 24/315 (7%)
Query: 250 NSIVAMYARC-GNVEKARL-----VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
N + + C G V +RL +FD RD S+ S+L G+ ++G+ EA LF +
Sbjct: 25 NGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84
Query: 304 QN----SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
DC + ++++ VSA L GR+ H I D ++ +++D Y K
Sbjct: 85 HRLGMEMDC--SIFSSVLKVSAT--LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK 140
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
+ +F+++ ERNV +W LI+GY + + L F +M EG +P+ TF
Sbjct: 141 GSNFKDGRKVFDEMK--ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+ L + G+ G + + K + + ++++ + G + +A + + +
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV- 257
Query: 480 PNDSVWGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
+ W +++ AAN L LE Y + ++ + + + + V KL ++K
Sbjct: 258 KSVVTWNSMISG------YAANGL-DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 540 KGLKKPAAFSVIEYG 554
+ SV++YG
Sbjct: 311 LRFTEQLHCSVVKYG 325
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/574 (38%), Positives = 339/574 (59%), Gaps = 9/574 (1%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
+ +L++C I GK +H I + G + + LV++Y C + +FD +S
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
R+L W VMI Y E A+ L+ + + GL+ D T V A L + + +
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
+H I + D+ + +++ MYA+CG VE AR VFD +++RD++ WNSML Y QNGQ
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
E+L L M + KP T +I ++A G G++ HGY + + ++ A
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
+MDMYAK G ++ A ++F + E+ V SWN +I GY MHGH +AL+ F +M + V
Sbjct: 244 LMDMYAKSGSVNVARSLFELL--EEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVL 300
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PDHITF +L+ACSH GL++EG+ F M + ++ P V+HY CM+D+LG G L EA+
Sbjct: 301 PDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYK 360
Query: 472 MIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
+I +M + P+ VWGALL +C+IHG E+A L +LEP+ G +V++SN+YA + K
Sbjct: 361 LIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGK 420
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W V +LR+ M NKGLKK A S IE G + F + D +P + +Y +++ +K
Sbjct: 421 WDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKE 480
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
AGY P + HDVED+++ M++ HSE+LA+AFG+++ + + + KNLR+C DCH A
Sbjct: 481 AGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVA 540
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+FIS I R+I +RD NR+HHF+ G CSC D+W
Sbjct: 541 IKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 226/404 (55%), Gaps = 14/404 (3%)
Query: 11 FYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+Y LL+SC ++ +Q+H+ + G+ L L K++ Y A LF+
Sbjct: 3 YYASLLQSCVVRKAIEPGKQLHARICQVGISFNPL-LATKLVNLYCICNSLTNAHLLFDR 61
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I K FLWN MIR YA NG + LY MR G+ + +TFPFVLKAC++ S +
Sbjct: 62 I--SKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAME 119
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
EGK +H D+IR+G SD +V AAL+DMYAKCG + +VFD++ RD+V W M+ Y
Sbjct: 120 EGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYS 179
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q +P+E+L L + GL T V +A G + + + +HGY+ + F +
Sbjct: 180 QNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDK 239
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
++ +++ MYA+ G+V AR +F+++E++ ++SWN+M+TGY +G A+EAL LF EM+
Sbjct: 240 VKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK- 298
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDT 365
P+ +T + +++AC++ G G K H + S+ I T+++ ++D+ CG L+
Sbjct: 299 VLPDHITFVGVLAACSHGGLLNEG-KMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEE 357
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQM 406
A + ++ E + W L+ +HG+ G ALE ++
Sbjct: 358 AYKLIMEMR-VEPDAGVWGALLHSCKIHGNVEMGELALEKLVEL 400
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/642 (37%), Positives = 367/642 (57%), Gaps = 32/642 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGI 106
+I + +G + AR F+ + S WN M+ AY NG E EL+ S I
Sbjct: 206 MISSHANHGLVSLARHYFDLAPEKDAVS--WNGMLAAYVRNGRIQEARELFDSRTEWDAI 263
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
S N+ +V ++ + + K+ D++ +V YA+ G + +
Sbjct: 264 SWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWN---------TMVSGYARRGDMAEARR 314
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD +RD+ +WT +++ Y Q EEA +F + ++V+ ++ +A Q
Sbjct: 315 LFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK----NAVSWNAMMAAYVQRRM 370
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ +A+ + C ++ N+++ YA+ G +++AR +F MM ++D +SW +ML
Sbjct: 371 MEEAKELFDAMPCR----NVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAA 426
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y Q G + E L LF EM N ++S C + + + G + H +I + +
Sbjct: 427 YSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVG 486
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA++ MY KCG ++ A + F ++ ER+V SWN +IAGY HG G++ALE F M
Sbjct: 487 CFVGNALLAMYFKCGSMEEAHSAFEEME--ERDVVSWNTMIAGYARHGFGKEALEVFDTM 544
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLGRA 463
+ KPD IT +L+ACSH+GL+++G F M + ++ KPE HY CM+D+LGRA
Sbjct: 545 RKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPE--HYTCMIDLLGRA 602
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L EA +++K MP P+ ++WGALL A RIH G AA +F+LEPE+ G +VL+S
Sbjct: 603 GRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLS 662
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA+S KWR+V K+R M +G+KK FS IE + F D V+P +++Y +E
Sbjct: 663 NIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLE 722
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ + +K AGY+ LHDVE+E++EHML YHSEKLAVA+GI+ + P ++V KNLR
Sbjct: 723 DLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLR 782
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH+AF+ IS I R II+RD+NRFHHF G+CSC DYW
Sbjct: 783 VCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 154/369 (41%), Gaps = 79/369 (21%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ + + G+ D ++F M R ++ M+ Y + +AL F+ + DS
Sbjct: 114 ITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR----PDS 169
Query: 212 VTIVSVASAVG---QLGDVLKAQAVHGYAICNAFLEDLCIQNSI-----VAMYARCGNVE 263
+ ++ A+G L DV A +++ +++S+ ++ +A G V
Sbjct: 170 FSYNTLLHALGVSSSLADV------------RALFDEMPVKDSVSYNVMISSHANHGLVS 217
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
AR FD+ ++D +SWN ML Y++NG+ EA LFD
Sbjct: 218 LARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFD---------------------- 255
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
S + DA NA+M Y + ++ A+ MFN + +R+V SW
Sbjct: 256 -----------------SRTEWDAISWNALMAGYVQRSQIEEAQKMFNKM--PQRDVVSW 296
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKP--DHITFTSILSACSHAGLIDEGRKCFADM 441
N +++GY G +A F V P D T+T+I+S + G+++E ++ F M
Sbjct: 297 NTMVSGYARRGDMAEARRLFD------VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAM 350
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-AA 500
K V A M + R + EA ++ MP N + W +L G + A
Sbjct: 351 PD---KNAVSWNAMMAAYVQRR-MMEEAKELFDAMPC-RNVASWNTMLTGYAQAGMLDEA 405
Query: 501 NYLFQLEPE 509
+F + P+
Sbjct: 406 RAIFGMMPQ 414
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 255/715 (35%), Positives = 396/715 (55%), Gaps = 51/715 (7%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ Q+LKSC L + + +H+ S LI + +L I+ Y+ TA FN
Sbjct: 11 FRQILKSCIANKDLLTGKSLHTIYLKS-LIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 69 HNDKSYSF-----------------------------LWNTMIRAYANNGHCVETLELYS 99
H +SF +NT+I AYA+ G + L L+
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
MR G+ + +TF V+ AC ++ ++ + +H +GF S V+ +L+ Y+K G
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187
Query: 160 QTDDGCKVFDEMS--VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
++ VF+ M VRD VSW MI AY Q ++ +AL L++ G D T+ SV
Sbjct: 188 ILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASV 247
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG-NVEKARLVFDMMEKRD 276
+ + D+ H AI F ++ + + ++ MYA+CG + ++R VF+ + D
Sbjct: 248 LTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSD 307
Query: 277 LISWNSMLTGYIQNGQAS-EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
L+ WN+M++GY QN + S EAL F +MQ + P+ + + +SAC+ L S G++FH
Sbjct: 308 LVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFH 367
Query: 336 GYIINSNMKIDA-TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
+ S + + ++ NA++ MY+KCG+L A +F + + N + N +IAGY HG
Sbjct: 368 ALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRM--PQHNTVTLNSIIAGYAQHG 425
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHY 453
G ++L F QML + P IT SILSAC+H G ++EG+K F M + ++PE +HY
Sbjct: 426 IGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHY 485
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEP 508
+CM+D+LGRAG L EA +I MP P + W ALL ACR +G E AAN QLEP
Sbjct: 486 SCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEP 545
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
+ +++++++Y+A+ KW E ++R+ M+++G++K S IE K + F D +P
Sbjct: 546 TNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHP 605
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCAL---HDVEDEDREHMLNYHSEKLAVAFGIMNL 625
KE++ ++ M V++K AGY+PD+ A + ++++E ML +HSEKLAVAFG++
Sbjct: 606 RIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFT 665
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ V KNLR+C DCH+A +F+S I RRKI VRDA RFH FE G CSC DYW
Sbjct: 666 KHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 212/433 (48%), Gaps = 12/433 (2%)
Query: 1 MRRLGPSTEGFY--DQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP 58
MR +G +GF + CN + +RQ+HS +SG + + + ++ Y+ G
Sbjct: 131 MREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGF-DSYVSVKNSLLTYYSKNGIL 189
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
A +FN + + WN+MI AY + ++ L LY M G + +T VL
Sbjct: 190 EEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLT 249
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ-TDDGCKVFDEMSVRDLV 177
+ + G H I+TGF + +V + L+DMYAKCG + KVF+E+ DLV
Sbjct: 250 TFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLV 309
Query: 178 SWTVMITAYEQ-AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
W MI+ Y Q E EAL F++ Q+ G D + V SA L + + H
Sbjct: 310 VWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHAL 369
Query: 237 AICNAFLED-LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
A+ + + + + N++V MY++CGN++ AR +F M + + ++ NS++ GY Q+G +E
Sbjct: 370 AMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTE 429
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN-SNMKIDATLRNAVM 354
+L LF++M + P +T + ++SAC + G + G+K+ + + ++ +A + ++
Sbjct: 430 SLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMI 489
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG---YGMHGHGRKALEFFSQMLEEGV 411
D+ + G L AE + D P ++W L+ YG KA F Q+
Sbjct: 490 DLLGRAGKLSEAERLI-DTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNA 548
Query: 412 KPDHITFTSILSA 424
P +I S+ SA
Sbjct: 549 VP-YIMLASMYSA 560
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 193/402 (48%), Gaps = 40/402 (9%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC----------GQT 161
+F +LK+C +N +L GK +H +++ S +Y+ + +Y+KC QT
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69
Query: 162 DD---------------------GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
+ +FD++ DLVS+ +I AY AL LF
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ ++ GL+ D T V +A +++ +H A + F + ++NS++ Y++ G
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIR--QLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187
Query: 261 NVEKARLVFDMM--EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
+E+A +VF+ M E RD +SWNSM+ Y Q+ + +AL L+ +M + + + T +
Sbjct: 188 ILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASV 247
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG-DLDTAENMFNDIHPSE 377
++ + + G +FH I + + + + ++DMYAKCG + + +F +I S+
Sbjct: 248 LTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSD 307
Query: 378 RNVSSWNVLIAGYGMHGH-GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
V WN +I+GY + +ALE F QM G PD +F +SACS+ +G++
Sbjct: 308 LVV--WNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQ 365
Query: 437 CFADMTKLSVKP-EVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
A K + ++ +V M + G L +A + ++MP
Sbjct: 366 FHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/676 (35%), Positives = 386/676 (57%), Gaps = 49/676 (7%)
Query: 47 KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI 106
K+I G+ A LF+ I + W +I + +G + +++YST+ +
Sbjct: 16 KLIKTCLNSGDLKRALYLFDKIPEPDLRT--WTILISGHTQHGFPKKAIDIYSTLLSRNV 73
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
+ + V KACA++ ++ K +H D I+ GF D + AL+DM+ KC +
Sbjct: 74 RPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARC 133
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
VFD+M V+D+VSWT M Y + ++LF++ G+ ++S+T+ S+ A D
Sbjct: 134 VFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA---D 190
Query: 227 VLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+K + VHG+ + N ++ + +++V MYA +++ARLVFD M RD++SWN MLT
Sbjct: 191 YIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLT 250
Query: 286 GY-----------------------------------IQNGQASEALLLFDEMQNSDCKP 310
Y +QNGQ AL + +MQ+S KP
Sbjct: 251 AYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKP 310
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N +T + + CT L S + G++ HGY+ D T+ A++ +YAKCGDL+ + ++F
Sbjct: 311 NRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVF 370
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
N + ++V +WN +I MHG G ++L F++ML+ GV+P+ +TF +LS CSH+ L
Sbjct: 371 NTM--PRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQL 428
Query: 431 IDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
DEG F M+ + S+ P+ HY+CMVD+L RAG L EA+D I++MP+ P + WGALL
Sbjct: 429 ADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALL 488
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR++ G +AA+ LF++EP++ G +VL+SNI + KW E ++R+ M++KGL K
Sbjct: 489 GACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAK 548
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S ++ + F T D+ N +Y+ ++ + ++++ GY P+ L +V+ E
Sbjct: 549 TPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQ 608
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
RE L HSE+LAVAFGI+N + + V+V KNLR+C DCH+A + I+ I +IIVRD+
Sbjct: 609 REETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSL 668
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G C+CND+W
Sbjct: 669 RFHHFRDGYCTCNDFW 684
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/621 (36%), Positives = 357/621 (57%), Gaps = 40/621 (6%)
Query: 98 YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK 157
Y+ M G ++YTFP +LKA A S + VH +++ G +++V +LV YA
Sbjct: 31 YARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAA 90
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
G + E V W +I+ + + + EA F + G VT VSV
Sbjct: 91 GGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSV 150
Query: 218 ASAVGQ-LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC----------------- 259
SA G+ GDVL VHG + + L DL ++N++V MYA C
Sbjct: 151 LSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRS 210
Query: 260 --------------GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
G V++AR +F M +RD +SW +M+ GY+Q + EAL +F EMQ
Sbjct: 211 VVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQC 270
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
S+ + T + +++AC LG+ ++G Y+ +K+DA + NA++DMY+KCG ++
Sbjct: 271 SNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIER 330
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A ++F D+H R+ +W +I G ++G+G +A+E F +M+ PD +TF +L+AC
Sbjct: 331 ALDVFKDMH--HRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTAC 388
Query: 426 SHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
+HAGL+D+GR+ F M + ++ P V HY C++D+ GRAG + EA D I QMP+ PN ++
Sbjct: 389 THAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTI 448
Query: 485 WGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
WG LL ACR+HG E+ L Q++PE++ + L+SNIYA N+W +V +LR +
Sbjct: 449 WGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIME 508
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
KG+KK S+IE I F D+ +P KE+Y K+ES+ ++ GY PD++ +
Sbjct: 509 KGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVFVE 568
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
V +E+++ +L +HSEKLA+AF +++ P V+++ KNLR+C DCH+A + IS +Y R+++
Sbjct: 569 VAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVV 628
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRD RFHHF G CSC DYW
Sbjct: 629 VRDRTRFHHFRHGFCSCKDYW 649
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 205/434 (47%), Gaps = 39/434 (8%)
Query: 23 ASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMI 82
A +R +H+ + G+ A H+ ++ Y G+ AR+L + ++ +WN +I
Sbjct: 60 APVRAVHAHVVKFGMGRNA-HVATSLVTAYAAGGDGAAARALLS--ERERDTPVVWNALI 116
Query: 83 RAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL-ILEGKVVHGDIIRTGF 141
+ E + M R+G + T+ VL AC + +L G VHG ++ +G
Sbjct: 117 SGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGV 176
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR--------------------------- 174
L D V+ ALVDMYA+C + K+FD M VR
Sbjct: 177 LPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGR 236
Query: 175 ----DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
D VSWT MI Y QA + EAL +F++ Q + +D T+VSV +A QLG +
Sbjct: 237 MPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMG 296
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ V Y D + N+++ MY++CG++E+A VF M RD +W +++ G N
Sbjct: 297 EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVN 356
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATL 349
G EA+ +F M P+ VT + +++ACT+ G GR+F + + N+ +
Sbjct: 357 GYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVH 416
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
++D++ + G + A + + + P N + W L+A +HG+ ++L+
Sbjct: 417 YGCIIDLFGRAGKITEALDAIDQM-PMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQ- 474
Query: 410 GVKPDHITFTSILS 423
+ P++ T ++LS
Sbjct: 475 -MDPENSTVYTLLS 487
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 151/334 (45%), Gaps = 31/334 (9%)
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
E+A+ + + G + D+ T + AV + +AVH + + + + S+
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V YA G+ AR + E+ + WN++++G+ + + EA F +M + P P
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144
Query: 313 VTALILVSACTY-LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++SAC G LG + HG ++ S + D + NA++DMYA+C D+++A +F+
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFD 204
Query: 372 DIHP-----------------------------SERNVSSWNVLIAGYGMHGHGRKALEF 402
+ ER+ SW +I GY R+ALE
Sbjct: 205 GMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEM 264
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
F +M V D T S+++AC+ G ++ G M++ +K + ++DM +
Sbjct: 265 FREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSK 324
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
G + A D+ K M + W A++L ++G
Sbjct: 325 CGSIERALDVFKDMH-HRDKFTWTAIILGLAVNG 357
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/561 (41%), Positives = 346/561 (61%), Gaps = 12/561 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP-NTARSLFNSIHN 70
++ LL C+ L L +IH+ + T+G Q L L K+II + AR +F+ +
Sbjct: 32 FNYLLNCCSSLPDLSRIHALVVTNG-CGQNLLLSTKLIITACCLAPTMDYARKMFDQM-- 88
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
K FLWNT+IR YA+ G C E L LYS M +G+ ++YTFPFV+++CA S + EGK
Sbjct: 89 PKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGK 148
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
VH +I++ GF SD +VQ++LV MY++ G+T VF EM VR++VSWT +I Y Q
Sbjct: 149 EVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNR 208
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+E L +F++ G ++VT+VSV A L + + +HGY I D+ + N
Sbjct: 209 YFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTN 268
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++A+Y +CGNVE AR +FD M ++L+SWN+M+ Y QN + A+ LF MQ
Sbjct: 269 ALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDF 328
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ +T + ++SAC LG+ GR H + ++I+ ++ NA++DMYAKCG++D A +F
Sbjct: 329 DYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVF 388
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ P R+V SW +I HGHG AL+ FS+M +EGVKP+ TF ++ +AC H+GL
Sbjct: 389 ERL-PC-RSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGL 446
Query: 431 IDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++EGRK F M + S+ P V+H ACMVD+LGRAG L EA++ I +MP+ P+ SVWGALL
Sbjct: 447 VEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALL 506
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
+CRIH E+ A LF L+P+ ++VLMSNIYA + +W + +LR+ M+ + LKK
Sbjct: 507 GSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKK 566
Query: 545 PAAFSVIEYGKDIQGFHTADR 565
S++E + F + R
Sbjct: 567 IPGHSLVEVNRRFHTFLSGSR 587
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/677 (34%), Positives = 386/677 (57%), Gaps = 19/677 (2%)
Query: 14 QLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
++++SC L +L R+IH + GL +++ +++ Y G AR +F +
Sbjct: 39 RVIQSCARLGALAEGRRIHQLIRRVGL-GSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE-G 129
+S W +I A +G E L L+ M + GI +S +F + AC++ L G
Sbjct: 98 KNVFS--WTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAG 155
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ +H + R GF +LV MY+KCG ++ K F+ M+ + VSW MI A+ +
Sbjct: 156 RALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEH 215
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+ EAL QK EG+ + SVT +++ SA Q + A+ +H + F +D +
Sbjct: 216 RRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD--VV 273
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N I+ MY +CG ++ A +F M + D+I+WN+M+ Y Q+G SEAL ++ MQ
Sbjct: 274 NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVV 333
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P+ T + ++ AC LG ++G++ H + + ++ L N++++MY KCG LD A ++
Sbjct: 334 PDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQV-TELANSLVNMYGKCGILDVARSI 392
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F+ + + +WN +I Y H H ++A E F M +G +P +ITF S+LSAC++AG
Sbjct: 393 FDK---TAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAG 449
Query: 430 LIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L +E F M + V+P HY CMV+ LG+AG L +A +I+ MP P+ W +
Sbjct: 450 LPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSF 509
Query: 489 LLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L CR HG++ AA +++PE + +V ++ I+A + ++E ++R+ M ++G++
Sbjct: 510 LANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIR 569
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K A S+I+ G + F D+ NP KE++ +++ + E+K AGY PD++ HDVE
Sbjct: 570 KNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAG 629
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
+E +L HSE+LA+AFGI++ + +++ KNLRVC DCH+ + S I RR+IIVRD+
Sbjct: 630 QKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDS 689
Query: 664 NRFHHFEGGTCSCNDYW 680
NRFHHF+ G+CSC D+W
Sbjct: 690 NRFHHFKNGSCSCKDFW 706
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/689 (35%), Positives = 392/689 (56%), Gaps = 17/689 (2%)
Query: 2 RRLGPSTEGF-YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGE 57
R LG + + +L++C L S+ + IH + G I + + + ++ Y +
Sbjct: 208 RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIG-IKKDVIVNNGLLSMYCKFNG 266
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
R +F+ + + S WNTMI Y+ G E+++L+ M + T +L
Sbjct: 267 LIDGRRIFDKMVLRDAVS--WNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSIL 323
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
+AC + GK VH +I +G+ D+ L++MYAKCG +VF M +D V
Sbjct: 324 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 383
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
SW MI Y Q +EA+ LF K + + DSVT V + S QLGD+ + +H
Sbjct: 384 SWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDL 442
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
F ++ + N++V MYA+CG + + VF+ M+ RD+I+WN+++ + + + L
Sbjct: 443 AKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGL 502
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
+ M+ P+ T L ++ C+ L +++ G++ HG I ++ D + N +++MY
Sbjct: 503 RMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMY 562
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHIT 417
+KCG L + +F + ++V +W LI+ GM+G G+KA+ F +M G+ PDH+
Sbjct: 563 SKCGSLRNSFQVFKLMKT--KDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVA 620
Query: 418 FTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
F +I+ ACSH+GL++EG F M K ++P ++HYAC+VD+L R+ L +A D I M
Sbjct: 621 FVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSM 680
Query: 477 PLPPNDSVWGALLLACRIHG--EIA---ANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
PL P+ S+WGALL ACR+ G EIA + + +L P+ TGY+VL+SNIYAA KW +V
Sbjct: 681 PLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVR 740
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
+R+ +K +GLKK S +E + F T + ++EV K + +A + GY+
Sbjct: 741 SIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIA 800
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
+L LHD++++++ +L HSE+LA+AFG++N P +QV KNLRVC DCH+ ++IS
Sbjct: 801 NLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYIS 860
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I +R+++VRDANRFH F+ G CSC DYW
Sbjct: 861 KIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 263/482 (54%), Gaps = 8/482 (1%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L S L ++HS + T GL + ++ AK+I KY + +P ++ S+F + + +
Sbjct: 23 LASAATTTQLHKLHSLIITLGL-HHSVIFSAKLIAKYAHFRDPTSSFSVFR-LASPSNNV 80
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
+LWN++IRA +NG E L LYS +R + ++YTFP V+ ACA K +H
Sbjct: 81 YLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDR 140
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
++ GF SD Y+ AL+DMY + D KVF+EM +RD+VSW +I+ Y EA
Sbjct: 141 VLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEA 200
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
L ++ + + G++ DS T+ SV A G LG V + +HG +D+ + N +++M
Sbjct: 201 LEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSM 260
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y + + R +FD M RD +SWN+M+ GY Q G E++ LF EM N KP+ +T
Sbjct: 261 YCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTI 319
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++ AC +LG + G+ H Y+I S + D T N +++MYAKCG+L ++ +F+ +
Sbjct: 320 TSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKC 379
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
++ SWN +I Y +G +A++ F +M++ VKPD +T+ +LS + G + G+
Sbjct: 380 --KDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGK 436
Query: 436 KCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
+ D+ K+ + +VDM + G + ++ + + M + W ++ +C +H
Sbjct: 437 ELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK-ARDIITWNTIIASC-VH 494
Query: 496 GE 497
E
Sbjct: 495 SE 496
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/582 (39%), Positives = 342/582 (58%), Gaps = 10/582 (1%)
Query: 107 SSNSYT-FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
S NSY + VL++C ++ + G+ +HG ++ +G D+ + LVD+YA CG
Sbjct: 58 SPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHAR 117
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
++FD M R++ W V+I AY + E A+ L++ G+ D+ T A L
Sbjct: 118 RLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALL 177
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
D+ + VH + + ED+ + +V MYA+CG V+ AR VFD + RD + WNSM+
Sbjct: 178 DLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIA 237
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
Y QNG+ EAL L +M + P T + +SA + GR+ HG+
Sbjct: 238 AYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDR 297
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
L+ +++DMYAK G + A +F + +R + SWN +I GYGMHGH +AL+ F++
Sbjct: 298 QDKLKTSLVDMYAKSGWVQVARVLFEQL--MKRELVSWNAMICGYGMHGHFDEALKLFNK 355
Query: 406 M-LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRA 463
M +E V PD+ITF +LSAC+H G++ E ++ F M + S+KP V+H+ C+VD+LG A
Sbjct: 356 MRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHA 415
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G EA+D+IK MP+ P+ +WGALL C+IH GE+A L +LEPE G +VL+S
Sbjct: 416 GRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLS 475
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA S KW + ++R+ M N+GLKK S IE GF D +P E+Y+++E
Sbjct: 476 NIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELE 535
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ + AGYMPD HDV D+++ +M+ HSE+LA+AFG+++ + VTKNLR
Sbjct: 536 RLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLR 595
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH + IS I +R+II+RD NR+HHF G CSC DYW
Sbjct: 596 VCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 211/393 (53%), Gaps = 9/393 (2%)
Query: 6 PSTEGFYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P++ Y +L+SC L + RQ+H L SGL + L K++ Y G AR
Sbjct: 59 PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTV-LATKLVDLYAACGLVGHAR 117
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
LF+ + K FLWN +IRAYA +G ++LY M G+ +++T+P LKACA+
Sbjct: 118 RLFDGM--PKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAA 175
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
+ G+ VH ++ T + D +V A LVDMYAKCG DD VFD + VRD V W M
Sbjct: 176 LLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSM 235
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I AY Q +P EAL L + G+ T+VS SA + + + +HG+ F
Sbjct: 236 IAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGF 295
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
++ S+V MYA+ G V+ AR++F+ + KR+L+SWN+M+ GY +G EAL LF++
Sbjct: 296 DRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNK 355
Query: 303 MQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKC 360
M+ + P+ +T + ++SAC + G + ++F G +++ ++K ++D+
Sbjct: 356 MRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHA 415
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
G + A ++ + P + + W L+ G +H
Sbjct: 416 GRFEEAYDLIKGM-PMQPDSGIWGALLNGCKIH 447
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/560 (40%), Positives = 337/560 (60%), Gaps = 14/560 (2%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G VH ++ G + V + +V YA G D VF+ + D ++ ++ + +
Sbjct: 89 GHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFN--GIGDYFTFPFVLKSSVE 146
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ + GL D S+ G+ G++ A G N + D+
Sbjct: 147 LLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDA----GKVFDNMTIRDVSS 202
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNS 306
N+++A Y + G ++ A +F+ M R+++SW +M++GY Q+G A +AL LFDEM ++S
Sbjct: 203 WNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDS 262
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+PN VT + ++ AC L + + GR+ H + +A++ A+ MYAKCG L A
Sbjct: 263 GVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDA 322
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
N F+ ++ +E+N+ +WN +I Y +GHG +A+ F +M++ G++PD ITFT +LS CS
Sbjct: 323 RNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCS 382
Query: 427 HAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL+D G K F M T S+ P V+HYAC+ D+LGRAG L EA ++ +MP+P S+W
Sbjct: 383 HSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIW 442
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
G+LL ACR H E AA LF LEPE+TG +VL+SN+YA + +W+EV KLR +K++
Sbjct: 443 GSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQ 502
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G KK S IE F D +P KE+Y +E++ ++K AGY PD S LHD+
Sbjct: 503 GTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDI 562
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+E++E L HSEKLAVAFGI+N E V++VTKNLR+C DCH+A FIS IY R++IV
Sbjct: 563 SEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIV 622
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD NRFHHF+GG CSC DYW
Sbjct: 623 RDINRFHHFKGGCCSCGDYW 642
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 192/417 (46%), Gaps = 79/417 (18%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
Q L N L Q+H+ + GL AL +G+K++ Y + G+ +++ S+FN I
Sbjct: 78 QFLTGLNMLKLGHQVHAHMLLRGLQPTAL-VGSKMVAFYASSGDIDSSVSVFNGI----- 131
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ +TFPFVLK+ + GK VH
Sbjct: 132 ----------------------------------GDYFTFPFVLKSSVELLSVWMGKCVH 157
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD------------------ 175
G I+R G D YV +L+ +Y KCG+ +D KVFD M++RD
Sbjct: 158 GLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCID 217
Query: 176 -------------LVSWTVMITAYEQAEKPEEALILFQKTQQE--GLLSDSVTIVSVASA 220
+VSWT MI+ Y Q+ ++AL LF + +E G+ + VTI+SV A
Sbjct: 218 AALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPA 277
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK--RDLI 278
QL + + + +H A + + ++ AMYA+CG++ AR FD + + ++LI
Sbjct: 278 CAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLI 337
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+WN+M+T Y G +A+ F EM + +P+ +T L+S C++ G +G K+ +
Sbjct: 338 AWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNH- 396
Query: 339 INSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+++ I+ + + V D+ + G L A + ++ P S W L+A H
Sbjct: 397 MSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEM-PMPAGPSIWGSLLAACRKH 452
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 16/240 (6%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L +C L++L RQIH GL + A L A + Y G AR+ F+ ++ +
Sbjct: 274 VLPACAQLSTLERGRQIHELACRMGLNSNASVLIA-LTAMYAKCGSLVDARNCFDKLNRN 332
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ WNTMI AYA+ GH ++ + + M ++GI + TF +L C+ + L+ G +
Sbjct: 333 EKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVG-L 391
Query: 132 VHGDIIRTGFLSDSYVQ--AALVDMYAKCGQTDDGCKVFDEMSVRDLVS-WTVMITA--- 185
+ + + T + + V+ A + D+ + G+ + K+ EM + S W ++ A
Sbjct: 392 KYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRK 451
Query: 186 ---YEQAEKPEEALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
E AE L + + T LLS+ V +L ++K+Q C+
Sbjct: 452 HRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCS 511
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 310 PNPVTALILV-SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
P P+ + V T L +LG + H +++ ++ A + + ++ YA GD+D++ +
Sbjct: 67 PPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVS 126
Query: 369 MFNDI----------HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+FN I S +S W G +HG +L G++ D
Sbjct: 127 VFNGIGDYFTFPFVLKSSVELLSVW----MGKCVHG----------LILRIGLQFDLYVA 172
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
TS++ G I++ K F +MT +V + ++ ++GC+ A + ++MP
Sbjct: 173 TSLIILYGKCGEINDAGKVFDNMTIR----DVSSWNALLAGYTKSGCIDAALAIFERMP 227
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/676 (35%), Positives = 371/676 (54%), Gaps = 17/676 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ +L+SC L R++H+ + + + + +I Y G+ +AR LF+ +
Sbjct: 138 FPSVLRSCAGAMDLVRGREVHAHVVRFDF-DMDVDVVNALITMYVKCGDVVSARMLFDKM 196
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WN MI Y N C+E LEL+ MR I + T V+ AC
Sbjct: 197 PTRDRIS--WNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERL 254
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G +H ++RT + + V +L+ MY G + VF M RD+VSWT +I+
Sbjct: 255 GTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVD 314
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
P++AL ++ + G + D VTI SV SA LG + +H A + + +
Sbjct: 315 NLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVV 374
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
NS++ MY++C +EKA +F + +D+ISW S++ G N + EAL+ F +M
Sbjct: 375 ANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS- 433
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KPN VT + +SAC +G+ G++ H + + + M D L NA++D+Y +CG + TA N
Sbjct: 434 KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALN 493
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
FN +E++V +WN+L+ GY G G +E F +M+E + PD +TF S+L ACS +
Sbjct: 494 QFN---LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRS 550
Query: 429 GLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
G++ EG + F M + P +KHYAC+VD+LGRAG L EA + I++MP+ P+ ++WGA
Sbjct: 551 GMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGA 610
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACRIH GE+AA ++F+ + E GY++L+ N+YA S KW EV K+R MK +GL
Sbjct: 611 LLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGL 670
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
S +E + F + D +P +E+ +E ++K +G+ C+ D
Sbjct: 671 IVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQ-ECSSMDGIQ 729
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+ + HSE+ A+A+ ++N P + VTKNL +C CHS +FIS I RR+I VRD
Sbjct: 730 TSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRD 789
Query: 663 ANRFHHFEGGTCSCND 678
+FHHF+ G CSC D
Sbjct: 790 TEQFHHFKDGLCSCGD 805
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 232/450 (51%), Gaps = 9/450 (2%)
Query: 41 ALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYST 100
++ LG ++ + +G+ A ++F + +S WN ++ Y G E L LY
Sbjct: 68 SVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFS--WNVLVGGYTKAGFFDEALCLYHR 125
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
+ +GI + YTFP VL++CA ++ G+ VH ++R F D V AL+ MY KCG
Sbjct: 126 ILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGD 185
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
+FD+M RD +SW MI+ Y + ++ E L LF + ++ + D +T+ SV SA
Sbjct: 186 VVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISA 245
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
LGD +H Y + A+ ++ + NS++ MY G+ ++A VF ME RD++SW
Sbjct: 246 CELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSW 305
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
++++G + N +AL + M+ + P+ VT ++SAC LG +G K H
Sbjct: 306 TTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAER 365
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ + + N+++DMY+KC ++ A +F+ I +++V SW +I G ++ +AL
Sbjct: 366 TGHILYVVVANSLIDMYSKCKRIEKALEIFHQI--PDKDVISWTSVINGLRINNRCFEAL 423
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
FF +M+ + KP+ +T S LSAC+ G + G++ A K + + ++D+
Sbjct: 424 IFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLY 482
Query: 461 GRAGCLYEAFDMIKQMPLPPND-SVWGALL 489
R G + A + Q L D W LL
Sbjct: 483 VRCGRMRTALN---QFNLNEKDVGAWNILL 509
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
NS L +G +AL MQ + L+ C G +++
Sbjct: 2 NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61
Query: 341 SNMKI-DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
S + + L NA++ M+ + GD+ A N+F + ER++ SWNVL+ GY G +A
Sbjct: 62 SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRM--GERDLFSWNVLVGGYTKAGFFDEA 119
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
L + ++L G++PD TF S+L +C+ A + GR+ A + + +V ++ M
Sbjct: 120 LCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITM 179
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ G + A + +MP S W A++
Sbjct: 180 YVKCGDVVSARMLFDKMPTRDRIS-WNAMI 208
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 249/688 (36%), Positives = 376/688 (54%), Gaps = 54/688 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+ + T L++ + + + Y AR LF+ + S WN M+ Y
Sbjct: 100 RQLFEKMPTRDLVSWNVMISGCV-----RYRNLRAARLLFDQMPERDVVS--WNAMLSGY 152
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A NG+ E E++ M NS ++ +L A N I + + + +S
Sbjct: 153 AQNGYVKEAKEIFDEM----PCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELIS-- 206
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ Y K + D +FD M RD VSW MI+ Y Q + EA LF+ E
Sbjct: 207 --WNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFE----E 260
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVH----------------GYAICNAF------- 242
+ D T ++ S Q G + +A+ V GY C
Sbjct: 261 SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELF 320
Query: 243 ----LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
+++ N+++ YA+ G++ +AR FD M +RD ISW +++ GY Q+G EAL
Sbjct: 321 EAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALH 380
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
LF EM+ + N T +S C + + +LG++ HG ++ + ++ + NA++ MY
Sbjct: 381 LFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYC 440
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG++D A +F I E+ V SWN +IAGY HG G++AL F M + G+ PD +T
Sbjct: 441 KCGNIDDAYIVFEGIE--EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTM 498
Query: 419 TSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+LSACSH GL+D+G + F MT+ + KHY CM+D+LGRAG L +A +++K MP
Sbjct: 499 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 558
Query: 478 LPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
P+ + WGALL A RIHG E AA +F++EP+++G +VL+SN+YAAS +W +VG+
Sbjct: 559 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGR 618
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R M+++G+KK +S +E I F D V+P +Y +E + +++K GY+
Sbjct: 619 MRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSS 678
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
LHDVE+E++ HML YHSEKLAVAFGI+ + ++V KNLRVC DCH+A + IS
Sbjct: 679 TKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISK 738
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I R II+RD++RFHHF GG CSC DYW
Sbjct: 739 IVGRLIILRDSHRFHHFNGGQCSCGDYW 766
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 198/484 (40%), Gaps = 97/484 (20%)
Query: 91 CVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA 150
C+ +L+ +T R + N + ++SL + +V +I T + +
Sbjct: 17 CLRSLQTTTTANRKPSTRN--------QPKTTSSLATDADIVKWNIAITNHMRN------ 62
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
GQ D ++F+ M R +SW MI+ +K A LF+K L+S
Sbjct: 63 --------GQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSW 114
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
+V I C+ R N+ ARL+FD
Sbjct: 115 NVMISG------------------------------CV---------RYRNLRAARLLFD 135
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M +RD++SWN+ML+GY QNG EA +FDEM CK N ++ +++A G +
Sbjct: 136 QMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP---CK-NSISWNGMLAAYVQNGRIED 191
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
R+ + S + N +M Y K L A +F+ + ER+ SWN +I+GY
Sbjct: 192 ARR----LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRM--PERDEVSWNTMISGY 245
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+G +A F EE D T+T+++S G++DE R+ F M PE
Sbjct: 246 AQNGELLEAQRLF----EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM------PEK 295
Query: 451 KHYACMVDMLGRAGC--LYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAA--NYLFQL 506
+ + G C + +A ++ + MP N S W ++ +G+IA N+ ++
Sbjct: 296 NSVSWNAIIAGYVQCKRMDQARELFEAMPC-QNVSSWNTMITGYAQNGDIAQARNFFDRM 354
Query: 507 EPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG-----------LKKPAAFSVIEYGK 555
+ + + YA S E L +MK G L A + +E GK
Sbjct: 355 PQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGK 414
Query: 556 DIQG 559
+ G
Sbjct: 415 QVHG 418
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 259/769 (33%), Positives = 406/769 (52%), Gaps = 111/769 (14%)
Query: 21 FLASLRQIHSSLTTSGLINQALH--LGAKIIIKYTTYGE-------------PNTARSL- 64
FL +LR +H+ L TS L++ H L ++I YT + P +A SL
Sbjct: 36 FLRALRCLHARLLTSALLHAPPHPHLTLRLIHLYTLSRDLPAAATLFCADPCPVSATSLV 95
Query: 65 ---------------FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISS 108
F+++ + + L N +I AYA H + ++ ++ SG +
Sbjct: 96 AAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRP 155
Query: 109 NSYTFPFVLKACA--SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ---TDD 163
+ Y+F +L A N + +H ++++G V ALV +Y KC T D
Sbjct: 156 DDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRD 215
Query: 164 GCKVFDEMSVRDLVSWTVM-------------------------------ITAYEQAEKP 192
KV DEM +D ++WT M I+ Y +
Sbjct: 216 ARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMA 275
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI--CNAFLED--LCI 248
EA LF++ E + D T SV SA +G ++VHG I F+ + L +
Sbjct: 276 VEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPV 335
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN------------------ 290
N++V Y++CGN+ AR +FD M +D++SWN++L+GY+++
Sbjct: 336 NNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNE 395
Query: 291 -------------GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
G A +AL LF++M++ + KP T ++AC LG+ + G++ HG+
Sbjct: 396 LSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGH 455
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
I+ + + NA++ MYA+CG + A MF + P+ +VS WN +I+ G HGHGR
Sbjct: 456 IVQLGFEGSNSAGNALITMYARCGAVKEAHLMFL-VMPNIDSVS-WNAMISALGQHGHGR 513
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACM 456
+ALE F +M+ EG+ PD I+F ++L+AC+H+GL+DEG + F M + + P HY +
Sbjct: 514 EALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRL 573
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHT 511
+D+LGRAG + EA D+IK MP P S+W A+L CR G++ AA+ LF++ P+H
Sbjct: 574 IDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD 633
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G ++L+SN Y+A+ W + ++R+ M+++G+KK S IE G + F D +P
Sbjct: 634 GTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAH 693
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
EVYK +E + +++ GY+PD LHD+E +EH+L HSE+LAV FG++NL P A V
Sbjct: 694 EVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATV 753
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLR+C+DCH+A F+S R+I+VRD RFHHF+ G CSC +YW
Sbjct: 754 TVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 121/280 (43%), Gaps = 19/280 (6%)
Query: 19 CNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLW 78
C +A R+I ++T +++ I+ Y + A +F + S W
Sbjct: 346 CGNIAVARRIFDNMTLKDVVSWN-----TILSGYVESSCLDKAVEVFEEMPYKNELS--W 398
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
M+ Y + G + L+L++ MR + YT+ + AC + GK +HG I++
Sbjct: 399 MVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQ 458
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF + AL+ MYA+CG + +F M D VSW MI+A Q EAL L
Sbjct: 459 LGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALEL 518
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI------QNSI 252
F + EG+ D ++ ++V +A G V + G+ + D I +
Sbjct: 519 FDRMVAEGIYPDRISFLTVLTACNHSGLVDE-----GFRYFESMKRDFGIIPGEDHYTRL 573
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLIS-WNSMLTGYIQNG 291
+ + R G + +AR + M S W ++L+G +G
Sbjct: 574 IDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/665 (34%), Positives = 380/665 (57%), Gaps = 16/665 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+++HS + +G + + ++ Y G+ A ++F+SI + +S W +I AY
Sbjct: 137 KRVHSHIMQTGYEGDRMVMNL-VVEMYGKCGDVEQAGNVFDSIQDPNVFS--WTIIIAAY 193
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR-TGFLSD 144
A NGHC+E L L S M ++G+ + YTF VL AC + + E K++H I TG D
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+ V AL+++Y KCG ++ VF ++ +D+VSW+ MI A+ Q+ + + A+ L
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDL 313
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
EG+ ++VT V+V AV L + +H + + +D+C+ +++V MY G VE
Sbjct: 314 EGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVET 373
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
AR +F+ +RD++SW+SM+ GY QN + AL LF EM+ +PN VT + + AC
Sbjct: 374 ARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAG 433
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
+G+ + G + H + + D + A++++Y KCG L+ AE +F + ++N+ +W
Sbjct: 434 VGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVF--LGMKKKNLLTWT 491
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
+ YG +GHG ++L+ M +G+KPD I F +IL +C++AG + +G + MT+
Sbjct: 492 SIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQD 551
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA---- 499
+ P V+H CMVD+LGRAG L A +I M + + W LL AC+ H + A
Sbjct: 552 FGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-WMMLLTACKAHNDTARAAR 610
Query: 500 -ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
A +FQLEP++ +VL+S+++ A+ W + R M +G+++ S IE G +
Sbjct: 611 AAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVH 670
Query: 559 GFHTADRVNPYW--KEVYKKVESMAVEIKMAGYMPDLSCA-LHDVEDEDREHMLNYHSEK 615
F A V P+ E++ +E + E++ AGY+PD + L DVE+ +E+ + YHSE
Sbjct: 671 EFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEM 730
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+ GI++ +++TKNLR+C+DCH A +F+S + R+I VRD R HHFE G CS
Sbjct: 731 LALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCS 790
Query: 676 CNDYW 680
C DYW
Sbjct: 791 CGDYW 795
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 241/464 (51%), Gaps = 13/464 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQAL---HLGAKIIIK-YTTYGEPNTARSLFNS 67
+L +C+ L +L +++H + L+ L I+I+ Y G + A +F+
Sbjct: 16 ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTF-PFVLKACASNSLI 126
+ + + W ++I A+ GH + + L+ M SG+S + TF +LK +
Sbjct: 76 MKDQNVVA--WTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
EGK VH I++TG+ D V +V+MY KCG + VFD + ++ SWT++I AY
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-D 245
Q E L L + Q G+ D T +V A +G + +A+ +H I + L+ D
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ +++ +Y +CG +E+A VF ++ +D++SW+SM+ + Q+GQA A+ L M
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDL 313
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+PN VT + ++ A T L + Q G++ H I+ + D L +A++ MY G ++T
Sbjct: 314 EGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVET 373
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A ++F ER+V SW+ +IAGY + +AL F +M +GV+P+ +TF S + AC
Sbjct: 374 ARSIFES--SRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDAC 431
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
+ G + G + + L + +V +V++ G+ G L EA
Sbjct: 432 AGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEA 475
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 218/446 (48%), Gaps = 17/446 (3%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M + G +G+ + +L +C + +L + +H++ +S +++ +G +I Y G
Sbjct: 209 MNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCG 268
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
A +F I N S W++MI A+A +G ++L M G+ N+ TF V
Sbjct: 269 ALEEAFGVFVQIDNKDIVS--WSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNV 326
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L+A S GK +H I++ G+ D + +ALV MY G + +F+ RD+
Sbjct: 327 LEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDV 386
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW+ MI Y Q E P AL LF++ + +G+ +SVT VS A +G + + +H
Sbjct: 387 VSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHER 446
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
C +D+ + ++V +Y +CG +E+A VF M+K++L++W S+ Y QNG S +
Sbjct: 447 VRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRS 506
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY-IINSNMKIDATLRN--AV 353
L L M+ KP+ + + ++ +C Y G Q+ + H Y ++ + I + + +
Sbjct: 507 LKLLHGMELQGMKPDGIVFVAILVSCNYAG--QMSKGLHYYNLMTQDFGIAPAVEHCGCM 564
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH---GHGRKALEFFSQMLEEG 410
+D+ + G L+ AE + N + + +W +L+ H +A E Q+ +
Sbjct: 565 VDILGRAGKLEAAEQLINTM--KFESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKN 622
Query: 411 VKPDHITFTSILSACSHAGLIDEGRK 436
P ++ +S+ A +E R+
Sbjct: 623 ATP-YVLLSSVFCAAGSWEAAEETRR 647
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/576 (39%), Positives = 336/576 (58%), Gaps = 9/576 (1%)
Query: 112 TFPFVLKACASNSLILE-GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
TFP LK+ + L G+ +H ++ ++ +V +L+ +YA+CG +VFDE
Sbjct: 119 TFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDE 178
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M VSWT +ITAY A EA+ + + G+ DS T V V +A ++ D+
Sbjct: 179 MPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATG 238
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ V A + + + + V +Y +CG + KAR VFD M +D ++W +M+ GY N
Sbjct: 239 ETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASN 298
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G EAL LF MQ +P+ +SACT LG+ LGR+ + + L
Sbjct: 299 GHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 358
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++DMYAKCG A +F + ++++ WN +I G GM GH + A QM + G
Sbjct: 359 TALIDMYAKCGSTAEAWVVFQQMR--KKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSG 416
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEA 469
VK + TF +L +C+H GLI +GR+ F +MTKL + P ++HY C+VD+L RAG L EA
Sbjct: 417 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEA 476
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH--GEIAANYLFQL---EPEHTGYFVLMSNIYAAS 524
+I MP+P N + GALL C+IH E+A + L QL EP ++G +V++SNIY+
Sbjct: 477 HQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNR 536
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
+W + KLR DMK KG++K A S +E+ + F D+ +P ++YKK++ + +E+
Sbjct: 537 GRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 596
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K GY P + DVEDE++EH L +HSEKLA+AF ++ P ++VTKNLRVC+DCH
Sbjct: 597 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCH 656
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A + IS I R+IIVRD NRFH F G+CSCNDYW
Sbjct: 657 TAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 370/614 (60%), Gaps = 22/614 (3%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN +R A E++ LY +M RSG S ++++FPF+LK+CAS SL + G+ +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE--MSVRDLVSWTVMITAYEQAEKPEEA 195
+ G ++ +V AL+ MY KCG D KVF+E S + V + +I+ Y K +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+F++ ++ G+ DSVT++ + + +++HG + ++ + NS + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y +CG+VE R +FD M + LI+WN++++GY QNG A + L L+++M++S P+P T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+ ++S+C +LG++++G + G ++ SN + + + NA + MYA+CG+L A +F DI
Sbjct: 261 VSVLSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF-DIM 318
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
P +++ SW +I YGMHG G L F M++ G++PD F +LSACSH+GL D+G
Sbjct: 319 PV-KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 435 RKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
+ F M + ++P +HY+C+VD+LGRAG L EA + I+ MP+ P+ +VWGALL AC+
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 494 IH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
IH E+A + + EP + GY+VLMSNIY+ S + ++R M+ + +K +
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI-KMAGYMPDLSCAL-HDVEDEDRE 606
S +E+ + F DR + +EV++ ++ + + ++AG ++ C +V RE
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG---NMDCDRGEEVSSTTRE 554
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
H SE+LA+AFGI+N P + V KNLRVC DCH + +S I R+ +VRDA+RF
Sbjct: 555 H-----SERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 667 HHFEGGTCSCNDYW 680
H+F+ G CSC DYW
Sbjct: 610 HYFKDGVCSCKDYW 623
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 213/428 (49%), Gaps = 9/428 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G S + F + +LKSC L+ S +Q+H +T G + L A +I Y G
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTA-LISMYCKCG 102
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
AR +F S +N +I Y N + ++ M+ +G+S +S T +
Sbjct: 103 LVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGL 162
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ C + G+ +HG ++ G S+ V + + MY KCG + G ++FDEM V+ L
Sbjct: 163 VPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL 222
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
++W +I+ Y Q + L L+++ + G+ D T+VSV S+ LG V
Sbjct: 223 ITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKL 282
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
N F+ ++ + N+ ++MYARCGN+ KAR VFD+M + L+SW +M+ Y +G
Sbjct: 283 VESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIG 342
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMD 355
L+LFD+M +P+ ++++SAC++ G G + F ++ + ++D
Sbjct: 343 LMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVD 402
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+ + G LD A F + P E + + W L+ +H + A F++++E +P++
Sbjct: 403 LLGRAGRLDEAME-FIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNN 459
Query: 416 ITFTSILS 423
I + ++S
Sbjct: 460 IGYYVLMS 467
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/675 (35%), Positives = 382/675 (56%), Gaps = 16/675 (2%)
Query: 16 LKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
L++C F+ R IH+ + S +++ +I Y G+ A +F S+
Sbjct: 258 LQACEGPTFIKIGRGIHAVILKSNHFTD-VYVSNALIAMYANCGQMEDAERVFKSMLFKD 316
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
S WNT++ N + + + M+ SG + + ++ A ++ +L G V
Sbjct: 317 CVS--WNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEV 374
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H I+ G S+ ++ +L+DMY KC F+ M +DL+SWT +I Y Q E
Sbjct: 375 HAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECH 434
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+AL L +K Q E + D + I S+ A L + +HGY + L D+ IQN+I
Sbjct: 435 LDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVL-KGGLADILIQNAI 493
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V +Y V+ AR VF+ + +D++SW SM+T + NG A EAL LF+ + ++ +P+
Sbjct: 494 VNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDL 553
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+T + ++ A L S + G++ HG++I ++ + N+++DMYA+CG ++ A N+FN
Sbjct: 554 ITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNY 613
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ +R++ W +I GMHG G+ A++ FS+M +E V PDHITF ++L ACSH+GL+
Sbjct: 614 V--KQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVV 671
Query: 433 EGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG++ F M + ++P +HYAC+VD+L R+ L EA+ ++ MP+ P+ VW ALL A
Sbjct: 672 EGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGA 731
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIH GE+AA L QL E++G +VL+SN +AA +W +V ++R MK LKK
Sbjct: 732 CRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKP 791
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDVEDEDR 605
S IE I F D+ +P +Y K+ +K GY HDV +E++
Sbjct: 792 GCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEK 851
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
ML HSE+LA+ +G++ + +++TKNLR+C+DCH+ F+ S I +R ++VRDA+R
Sbjct: 852 TQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASR 911
Query: 666 FHHFEGGTCSCNDYW 680
FHHFE G CSC D+W
Sbjct: 912 FHHFERGLCSCGDFW 926
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 261/503 (51%), Gaps = 15/503 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MR LG S + F + +LK+C R +IH G A +I Y G
Sbjct: 139 MRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNA-LIAMYAKCG 197
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+ AR LF+S +K WN++I A+ G +E L L+ M+ G+ SN+YTF
Sbjct: 198 DLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSA 257
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L+AC + I G+ +H I+++ +D YV AL+ MYA CGQ +D +VF M +D
Sbjct: 258 LQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDC 317
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW +++ Q + +A+ FQ Q G D V+++++ +A G+ ++L VH Y
Sbjct: 318 VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAY 377
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
AI + ++ I NS++ MY +C V+ F+ M ++DLISW +++ GY QN +A
Sbjct: 378 AIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDA 437
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L L ++Q +P+ ++ AC+ L S +L ++ HGY++ + D ++NA++++
Sbjct: 438 LNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNV 496
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y + +D A ++F I + +++ SW +I +G +ALE F+ ++E ++PD I
Sbjct: 497 YGELALVDYARHVFESI--NSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLI 554
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMI 473
T S+L A + + +G++ + + E +VDM R G + A F+ +
Sbjct: 555 TLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYV 614
Query: 474 KQMPLPPNDSVWGALLLACRIHG 496
KQ L +W +++ A +HG
Sbjct: 615 KQRDL----ILWTSMINANGMHG 633
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 218/431 (50%), Gaps = 14/431 (3%)
Query: 6 PSTEGF-----YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGE 57
P+T F Y Q L+ C L +Q+H+ + ++ L K + Y G
Sbjct: 38 PTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGS 97
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
A +F+ + + F WN MI A + G VE +ELY MR G+S +++TFP VL
Sbjct: 98 FYDAVKVFDKM--SERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVL 155
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE--MSVRD 175
KAC + G +HG ++ G+ +V AL+ MYAKCG +FD M D
Sbjct: 156 KACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDD 215
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
VSW +I+A+ + EAL LF++ Q+ G+ S++ T VS A + + +H
Sbjct: 216 PVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHA 275
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + D+ + N+++AMYA CG +E A VF M +D +SWN++L+G +QN S+
Sbjct: 276 VILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSD 335
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
A+ F +MQ+S KP+ V+ L +++A + G + H Y I + + + N+++D
Sbjct: 336 AINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLID 395
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KC + + F + E+++ SW +IAGY + AL ++ E + D
Sbjct: 396 MYGKCCCVKYMGSAFE--YMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDP 453
Query: 416 ITFTSILSACS 426
+ SIL ACS
Sbjct: 454 MMIGSILLACS 464
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 190/364 (52%), Gaps = 5/364 (1%)
Query: 117 LKACASNSLILEGKVVHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
L+ CAS+ + +G+ +H ++T +L ++ V MY KCG D KVFD+MS R
Sbjct: 53 LELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT 112
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+ +W MI A A + EA+ L+++ + G+ D+ T V A G + +HG
Sbjct: 113 IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHG 172
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD--MMEKRDLISWNSMLTGYIQNGQA 293
A+ + + + N+++AMYA+CG++ AR++FD +MEK D +SWNS+++ ++ G++
Sbjct: 173 VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES 232
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EAL LF MQ + N T + + AC ++GR H I+ SN D + NA+
Sbjct: 233 LEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNAL 292
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+ MYA CG ++ AE +F + ++ SWN L++G + A+ F M + G KP
Sbjct: 293 IAMYANCGQMEDAERVFKSM--LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKP 350
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
D ++ ++++A + + G + A K + + ++DM G+ C+
Sbjct: 351 DQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAF 410
Query: 474 KQMP 477
+ MP
Sbjct: 411 EYMP 414
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 338/572 (59%), Gaps = 9/572 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L++C ++ + G+ +HG ++ +G D+ + LVD+YA CGQ ++FD M R+
Sbjct: 68 ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN 127
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+ W V+I AY + E A+ L++ + G+ D+ T V A L D+ + VH
Sbjct: 128 VFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQ 187
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ +D+ + +V MYA+CG V+ AR VFD + RD + WNSM+ Y QNG+ E
Sbjct: 188 RVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPME 247
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL L +M + P T + VSA + GR+ HG+ + L+ +++D
Sbjct: 248 ALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVD 307
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPD 414
MYAK G + A +F + +R + SWN +I GYGMHGH +AL F++M + V PD
Sbjct: 308 MYAKSGWVQVARVLFEQL--MKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPD 365
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+ITF +LSAC+H G+++E ++ F M S+KP V+HY C++D+LG G EA+D+I
Sbjct: 366 NITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLI 425
Query: 474 KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
K M + P+ +WGALL C+IH GE+A L +LEPE G +V +SNIYA S KW
Sbjct: 426 KGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWE 485
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
+ ++R+ M N+GLKK A S IE GF D +P E+Y ++E + + AG
Sbjct: 486 KAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAG 545
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y+PD+ H+V+D+++ +M+ HSE+LA+AFG+++ P + VTKNLRVC DCH +
Sbjct: 546 YVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIK 605
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS I +R+II+RD NR+HHF G CSC DYW
Sbjct: 606 LISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 213/398 (53%), Gaps = 11/398 (2%)
Query: 3 RLGPSTEGFYDQ--LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGE 57
RL S ++ +L+SC SLR Q+H L SGL + L K++ Y G+
Sbjct: 54 RLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTV-LSTKLVDLYAACGQ 112
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
AR LF+ + K FLWN +IRAYA G + LY M G+ +++T+P VL
Sbjct: 113 VGHARRLFDGM--PKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVL 170
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
KACA+ + G+ VH + T + D +V A +VDMYAKCG DD VFD ++VRD V
Sbjct: 171 KACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAV 230
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
W MI AY Q +P EAL L + G+ T+VS SA + + + +HG+
Sbjct: 231 VWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFG 290
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
F ++ S+V MYA+ G V+ AR++F+ + KR+L+SWN+M+ GY +G A EAL
Sbjct: 291 WRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEAL 350
Query: 298 LLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMD 355
LF++M+ ++ P+ +T + ++SAC + G + ++F ++N+ ++K V+D
Sbjct: 351 ALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVID 410
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+ G + A ++ + E + W L+ G +H
Sbjct: 411 VLGHTGRFEEAYDLIKGMS-IEPDSGIWGALLNGCKIH 447
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/607 (37%), Positives = 352/607 (57%), Gaps = 9/607 (1%)
Query: 81 MIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
MI + N +++ ++ M +G + T VL A A + G + I+
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
GF S + L+ +++KCG+ + +F E+ +DL+S MI+ + + E+++ LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
++ G S TIV + G +HG+ + + + ++ +Y R
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
+ AR +FD ++ L SWN+M++G QNG A+ LF MQ ++ PNPVT ++
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
SAC +G+ LG H I ++ + + + A++DMYAKCG + A +F D+ P E+N
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELF-DLMP-EKN 298
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
+WN +I+GYG+HGHG++AL+ F ML VKP +TF S+L ACSHAGL+ EG F
Sbjct: 299 EVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFH 358
Query: 440 DMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE- 497
M +P +HYACMVD+LGRAG L +A + IK MP+ P VWGALL AC IH +
Sbjct: 359 TMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDT 418
Query: 498 ----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
+A+ LF+L+PE+ GY+VLMSNIY+ K+ + +R+ K K L K ++IE
Sbjct: 419 NLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEI 478
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
G+ F + D+ +P K +Y +++ + ++ AG+ + + LHD+E+E++E + HS
Sbjct: 479 GQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHS 538
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLA+AFG+++ P A +++ KNLRVC DCH+ +F+S I +R I+VRDANRFHHF+ G
Sbjct: 539 EKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGL 598
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 599 CSCGDYW 605
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 182/377 (48%), Gaps = 6/377 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I ++ GE AR LF I S N MI + NG +++ L+ + SG
Sbjct: 72 LISLFSKCGEVEIARLLFGEIRKKDLIS--CNAMISGFTCNGETEDSVRLFKELLSSGER 129
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+S T ++ + +HG ++ G +S S V AL +Y + + ++
Sbjct: 130 VSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQL 189
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
FDE + + L SW MI+ Q + A+ LFQ Q+ + + VT+ S+ SA Q+G +
Sbjct: 190 FDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGAL 249
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ VH N F ++ + +++ MYA+CG++ AR +FD+M +++ ++WN+M++GY
Sbjct: 250 SLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGY 309
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKID 346
+G EAL LF +M +S KP +T L ++ AC++ G + G FH + + +
Sbjct: 310 GLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPL 369
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
A ++D+ + G L A F P E W L+ +H A ++
Sbjct: 370 AEHYACMVDILGRAGQLKKALE-FIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKL 428
Query: 407 LEEGVKPDHITFTSILS 423
E + P++I + ++S
Sbjct: 429 FE--LDPENIGYYVLMS 443
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 4/239 (1%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
IH G+++ + + + Y E AR LF+ S WN MI
Sbjct: 154 IHGFCVKLGIVSHS-SVSTALTTVYCRLNEMIFARQLFDESAEKTLAS--WNAMISGCTQ 210
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
NG + L+ TM+++ ++ N T +L ACA + G+ VH I F S+ YV
Sbjct: 211 NGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYV 270
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
AL+DMYAKCG ++FD M ++ V+W MI+ Y +EAL LF +
Sbjct: 271 STALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSV 330
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS-IVAMYARCGNVEKA 265
+T +SV A G V + + + + E L + +V + R G ++KA
Sbjct: 331 KPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKA 389
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/641 (37%), Positives = 362/641 (56%), Gaps = 56/641 (8%)
Query: 52 YTTYGEPNTARSLFN--SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSN 109
Y+ G R++F+ S+H+ SY NT+I ++ NG + LE + M+ G S
Sbjct: 99 YSKSGNVEDLRAVFDQMSVHDAVSY----NTVIAGFSGNGCSSQALEFFVRMQEEGFEST 154
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD 169
YT VL AC+ I GK +HG I+ T +V AL +MYAKCG D +FD
Sbjct: 155 DYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFD 214
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
M +++VSW MI+ Y Q +PE LF + Q GL+ D VTI ++ SA
Sbjct: 215 RMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA--------- 265
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
Y +CG +++A F ++++D + W +M+ G Q
Sbjct: 266 --------------------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQ 299
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
NG+ +ALLLF EM + +P+ T +VS+C L S G+ HG + + D +
Sbjct: 300 NGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLV 359
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
+A++DMY+KCG+ A +F + RNV SWN +I GY +G +AL + +ML E
Sbjct: 360 SSALVDMYSKCGETADAWIVFKRMLT--RNVISWNSMILGYAQNGKDLEALALYEEMLHE 417
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYE 468
+KPD+ITF +LSAC HAGL++ G+ F ++K+ + P HY+CM+++LGRAG + +
Sbjct: 418 NLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDK 477
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAA 523
A D+IK M PN +W LL CRI+ GE+AA +LF+L+P + G ++++SNIYAA
Sbjct: 478 AVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAA 537
Query: 524 SNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE 583
+W++V +R MKN +KK AA+S IE + F DR + +++Y+++ + +
Sbjct: 538 CGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKK 597
Query: 584 IKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN----LTPEAVVQVTKNLRV 639
++ +G+ PD + LHDV +E++ + YHSEKLA+AF ++ TP +++ KN+RV
Sbjct: 598 LQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTP---IRIMKNIRV 654
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH +F+S I RR II+RD NRFHHF G CSC D W
Sbjct: 655 CGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 216/451 (47%), Gaps = 77/451 (17%)
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDI-IRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
++NS ++ +L C ++ +++ K + + + +D+++Q L+ +YAK G D
Sbjct: 19 TANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDAR 78
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPE-------------------------------E 194
+FD+MS RD+ SW M++AY ++ E +
Sbjct: 79 DLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQ 138
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL F + Q+EG S T VSV A QL D+ + + +HG + + E + + N++
Sbjct: 139 ALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTN 198
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MYA+CG +++AR +FD M ++++SWNSM++GY+QNGQ LF EMQ+S P+ VT
Sbjct: 199 MYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVT 258
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
++SA Y +CG +D A F +I
Sbjct: 259 ISNILSA-----------------------------------YFQCGYIDEACKTFREI- 282
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
E++ W ++ G +G AL F +ML E V+PD+ T +S++S+C+ + +G
Sbjct: 283 -KEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQG 341
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ V ++ + +VDM + G +A+ + K+M L N W +++L
Sbjct: 342 QAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRM-LTRNVISWNSMILGYAQ 400
Query: 495 HG-EIAANYLFQ------LEPEHTGYFVLMS 518
+G ++ A L++ L+P++ + ++S
Sbjct: 401 NGKDLEALALYEEMLHENLKPDNITFVGVLS 431
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/659 (35%), Positives = 368/659 (55%), Gaps = 55/659 (8%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF S+ S WN M+ A + +G E L + M G+ +S T+ L AC
Sbjct: 247 ALELFESMPERDVVS--WNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTAC 304
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A S + GK +H +IR+ D YV +A+V++YAKCG + +VF + R+ VSWT
Sbjct: 305 AKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWT 364
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
V+I + Q E+L LF + + E + D + ++ S D+ A+ +H ++ +
Sbjct: 365 VLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKS 424
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ I NS+++MYA+CGN++ A +F ME+RD++SW MLT Y Q G +A F
Sbjct: 425 GHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFF 484
Query: 301 DEMQN--------------------------------SDCKPNPVTALILVSACTYLGSR 328
D M D P+ VT + L C +G+
Sbjct: 485 DGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGAN 544
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+LG + G+ + + +D ++ NAV+ MY+KCG + A +F+ + S +++ SWN +I
Sbjct: 545 KLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFL--SRKDLVSWNAMIT 602
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL--SV 446
GY HG G++A+E F ML++G KPD+I++ ++LS+CSH+GL+ EG+ F DM K +V
Sbjct: 603 GYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYF-DMLKRDHNV 661
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAAN 501
P ++H++CMVD+L RAG L EA ++I +MP+ P VWGALL AC+ HG E+AA
Sbjct: 662 SPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAK 721
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
+LF L+ +G ++L++ IYA + K + ++R+ M++KG+KK +S +E + F
Sbjct: 722 HLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFK 781
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
D +P + +K++ + +I GY V E + +HSEKLAVAFG
Sbjct: 782 AEDVSHPQVIAIREKLDELMEKIAQLGY----------VRTESLRSEI-HHSEKLAVAFG 830
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IMNL + + KNLR+C DCH+ + IS + R+ ++RDA RFHHF+GG+CSC DYW
Sbjct: 831 IMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/540 (25%), Positives = 237/540 (43%), Gaps = 78/540 (14%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNS 110
Y G + A LF + S WNT++ Y +G ++ +E + +MRRSG S N+
Sbjct: 105 YAKLGSLSDAEELFGRMPRRDVTS--WNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNA 162
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK---- 166
+TF +K+C + + G + + GF D V +VDM+ +CG D K
Sbjct: 163 FTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQ 222
Query: 167 ---------------------------VFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
+F+ M RD+VSW +M++A Q+ + EAL +
Sbjct: 223 IERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVA 282
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
G+ DS T S +A +L + + +H I + D + +++V +YA+C
Sbjct: 283 VDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKC 342
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G ++AR VF + R+ +SW ++ G++Q G SE+L LF++M+ + ++
Sbjct: 343 GCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATII 402
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP---- 375
S C+ L R+ H + S + N+++ MYAKCG+L AE++F+ +
Sbjct: 403 SGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIV 462
Query: 376 -------------------------SERNVSSWNVLIAGYGMHGHGRKALEFFSQML-EE 409
S RNV +WN ++ Y HG L+ +S ML E+
Sbjct: 463 SWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEK 522
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
V PD +T+ ++ C+ G G + K+ + + ++ M + G + EA
Sbjct: 523 DVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEA 582
Query: 470 ---FDMIKQMPLPPNDSVWGALLLACRIHG------EIAANYLFQ-LEPEHTGYFVLMSN 519
FD + + L W A++ HG EI + L + +P++ Y ++S+
Sbjct: 583 RKIFDFLSRKDLVS----WNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSS 638
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 155/329 (47%), Gaps = 38/329 (11%)
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
++ GDI ++ + +++ YAK G D ++F M RD+ SW +++ Y Q+
Sbjct: 85 LLRGDITEPNVITHNI----MMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSG 140
Query: 191 KPEEALILFQKTQQEG-LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+ +A+ F ++ G L ++ T + G LG A + G F D +
Sbjct: 141 RFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVA 200
Query: 250 NSIVAMYARCG-------------------------------NVEKARLVFDMMEKRDLI 278
IV M+ RCG V+ A +F+ M +RD++
Sbjct: 201 TGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVV 260
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
SWN M++ Q+G+A EAL + +M N + + T ++AC L S G++ H +
Sbjct: 261 SWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQV 320
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
I S ID + +A++++YAKCG A +F+ + +RN SW VLI G+ +G +
Sbjct: 321 IRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLR--DRNTVSWTVLIGGFLQYGCFSE 378
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSH 427
+LE F+QM E + D +I+S CS+
Sbjct: 379 SLELFNQMRAELMTVDQFALATIISGCSN 407
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 51/299 (17%)
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLE------------DLCIQNSIVAMYARCGNV 262
V +ASAV L+ +H Y C A + ++ N ++ YA+ G++
Sbjct: 57 VGLASAV-----FLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSL 111
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS-DCKPNPVTALILVSA 321
A +F M +RD+ SWN++++GY Q+G+ +A+ F M+ S D PN T + +
Sbjct: 112 SDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKS 171
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI-HPS---- 376
C LG ++ + G + + D + ++DM+ +CG +D A F+ I P+
Sbjct: 172 CGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCR 231
Query: 377 ------------------------ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
ER+V SWN++++ G R+AL M GV+
Sbjct: 232 NSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVR 291
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTK--LSVKPEVKHYACMVDMLGRAGCLYEA 469
D T+TS L+AC+ + G++ A + + + P V + MV++ + GC EA
Sbjct: 292 LDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVA--SAMVELYAKCGCFKEA 348
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 4/195 (2%)
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N +M+ YAK G L AE +F + R+V+SWN L++GY G A+E F M G
Sbjct: 99 NIMMNGYAKLGSLSDAEELFGRM--PRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSG 156
Query: 411 VK-PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
P+ TF + +C G + + +TK + + +VDM R G + A
Sbjct: 157 DSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFA 216
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEH-TGYFVLMSNIYAASNKWR 528
Q+ P L + +G A LF+ PE + +M + + S + R
Sbjct: 217 SKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAR 276
Query: 529 EVGKLREDMKNKGLK 543
E + DM N+G++
Sbjct: 277 EALSVAVDMHNRGVR 291
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/684 (34%), Positives = 392/684 (57%), Gaps = 25/684 (3%)
Query: 16 LKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
L SC SLR +IH + S L + ++ Y G + A+ +F + +
Sbjct: 65 LGSCGDPESLRDGIRIHQMVVDSRLEIDP-KVSNALLNMYKKCGSLSHAKRVFAKMERTR 123
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+ W+ M A+A +G+ E L + M GI + +L AC+S +L+ +G+++
Sbjct: 124 NV-ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMI 182
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAE 190
H I +GF S+ V A++ MY +CG ++ KVFD M ++RD+VSW +M++ Y +
Sbjct: 183 HSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHND 242
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+ ++A+ L+Q+ Q L D VT VS+ SA DV + +H + + +++ + N
Sbjct: 243 RGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGN 299
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM------- 303
++V+MYA+CG+ +AR VFD ME+R +ISW ++++ Y++ +EA LF +M
Sbjct: 300 ALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNG 359
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ KP+ + + +++AC + + + G+ + + D + AV+++Y KCG++
Sbjct: 360 SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 419
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ A +F+ + S +V WN +IA Y G +AL+ F +M EGV+PD +F SIL
Sbjct: 420 EEARRIFDAV-CSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILL 478
Query: 424 ACSHAGLIDEGRKCFADMTK--LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
ACSH GL D+G+ F MT +V ++H+ C+ D+LGR G L EA + ++++P+ P+
Sbjct: 479 ACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPD 538
Query: 482 DSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRED 536
W +LL ACR H ++ AN L +LEP +V +SNIYA KW V K+R+
Sbjct: 539 AVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKF 598
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCA 596
M +G+KK S IE GK + F T D +P +E+ +++ + ++K GY+PD
Sbjct: 599 MAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMV 658
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
LH V+++++E +L HSE+LA+A G+++ ++VTKNLRVC+DCH+A + IS I R
Sbjct: 659 LHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGR 718
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
KI+VRD RFH F+ G CSC DYW
Sbjct: 719 KIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 228/448 (50%), Gaps = 17/448 (3%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y P A++ F+++ YS W ++ A+A +G ETL MR+ G+ ++
Sbjct: 2 YAHCDSPGDAKAAFDALEQRNLYS--WTGLVAAFAISGQSKETLRALERMRQDGVRPDAV 59
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TF L +C + +G +H ++ + D V AL++MY KCG +VF +M
Sbjct: 60 TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 172 S-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
R+++SW++M A+ EAL F+ G+ + +V++ SA V
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK--RDLISWNSMLTGYI 288
+ +H + F +L + N+++ MY RCG VE+AR VFD M++ RD++SWN ML+ Y+
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
N + +A+ L+ MQ +P+ VT + L+SAC+ LGR H I+N ++ +
Sbjct: 240 HNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVI 296
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ NA++ MYAKCG A +F+ + +R++ SW +I+ Y +A F QMLE
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKME--QRSIISWTTIISAYVRRRLVAEACHLFQQMLE 354
Query: 409 -------EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLG 461
+ VKPD + F +IL+AC+ +++G+ + + +V++ G
Sbjct: 355 LEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYG 414
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ G + EA + + P+ +W A++
Sbjct: 415 KCGEIEEARRIFDAVCSRPDVQLWNAMI 442
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 184/365 (50%), Gaps = 12/365 (3%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MYA C D FD + R+L SWT ++ A+ + + +E L ++ +Q+G+ D+VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
++ + G + +H + + D + N+++ MY +CG++ A+ VF ME
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 274 K-RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
+ R++ISW+ M + +G EAL F M K + ++SAC+ Q GR
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
H I S + + + NAVM MY +CG ++ A +F+ + + R+V SWN++++ Y
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
+ G+ A++ + +M ++PD +T+ S+LSACS A + GR + ++ V
Sbjct: 241 NDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297
Query: 453 YACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQ--LE 507
+V M + G EA FD ++Q + ++ A + R+ E A +LFQ LE
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRR-RLVAE--ACHLFQQMLE 354
Query: 508 PEHTG 512
E G
Sbjct: 355 LEKNG 359
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 141/276 (51%), Gaps = 6/276 (2%)
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MYA C + A+ FD +E+R+L SW ++ + +GQ+ E L + M+ +P+ VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+ + +C S + G + H +++S ++ID + NA+++MY KCG L A+ +F +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
+ RNV SW+++ + +HG+ +AL F ML G+K +ILSACS L+ +G
Sbjct: 121 RT-RNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
R + + + E+ ++ M GR G + EA + M D V ++L+ +
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239
Query: 495 HGEIAANYL-----FQLEPEHTGYFVLMSNIYAASN 525
H + + + QL P+ Y L+S +A +
Sbjct: 240 HNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAED 275
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/571 (39%), Positives = 326/571 (57%), Gaps = 9/571 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L++C + I GK +H + GF D+ + LV++Y C +FD + +
Sbjct: 81 LLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHN 140
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+ W V+I Y E A+ L+ + GL+ D+ T V A L + + +H
Sbjct: 141 IFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHE 200
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + + +D+ + +++ MYA+CG V AR VFD + RD + WNSML Y QNG
Sbjct: 201 HVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDA 260
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
L L EM + +P T + +SA + GR+ HG + ++ A++D
Sbjct: 261 CLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVD 320
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAKCG + A N+F + + V SWN +I GY MHGH +AL+ F +M KPDH
Sbjct: 321 MYAKCGSVRVARNLFERL--GVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDH 377
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
ITF +LSACSH GL++EG F M + + P V+HY CMVD+LG +G L EA+++I
Sbjct: 378 ITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIM 437
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
QM + P+ VWGALL +C+IH GEIA L +LEP+ G +V++SNIYA + KW
Sbjct: 438 QMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEG 497
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V KLR+ M ++ LKK A S IE + F + D +P E+Y ++E + +K AGY
Sbjct: 498 VAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGY 557
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
P HDVED+++ +M+ HSE+LA+AFG+++ P + +TKNLR+C DCH A +F
Sbjct: 558 SPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKF 617
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS I R+I VRD NR+HHF+ G CSC DYW
Sbjct: 618 ISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 229/420 (54%), Gaps = 19/420 (4%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL+SC + +Q+H+ + +G + + K++ Y ++AR LF+ I
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTV-IATKLVNLYCVCDSLSSARLLFDRI 136
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
K FLWN +IR YA NG ++LY M G+ +++TFPFVLKACA+ S I
Sbjct: 137 --PKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEH 194
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H +++TG+ D +V AAL+DMYAKCG +VFD++ VRD V W M+ AY Q
Sbjct: 195 GREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQ 254
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
P+ L L + GL T+V+ SA + + + +HG + F +
Sbjct: 255 NGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKV 314
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+ ++V MYA+CG+V AR +F+ + + ++SWN+M+TGY +G A+EAL LF+EM N
Sbjct: 315 KTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVA 373
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTA 366
KP+ +T + ++SAC++ G + G F +I + KID T+++ ++D+ G LD A
Sbjct: 374 KPDHITFVGVLSACSHGGLLEEGWMFFETMIR-DYKIDPTVQHYTCMVDLLGHSGRLDEA 432
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFTSILS 423
N+ + + W L+ +H + G ALE +++E ++PD ILS
Sbjct: 433 YNLIMQMKVLP-DSGVWGALLNSCKIHANVELGEIALE---RLIE--LEPDDAGNYVILS 486
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/576 (39%), Positives = 336/576 (58%), Gaps = 9/576 (1%)
Query: 112 TFPFVLKACASNSLILE-GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
TFP LK+ + L G+ +H ++ ++ +V +L+ +YA+CG +VFDE
Sbjct: 72 TFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDE 131
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M VSWT +ITAY A EA+ + + G+ DS T V V +A ++ D+
Sbjct: 132 MPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATG 191
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ V A + + + + V +Y +CG + KAR VFD M +D ++W +M+ GY N
Sbjct: 192 ETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASN 251
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G EAL LF MQ +P+ +SACT LG+ LGR+ + + L
Sbjct: 252 GHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 311
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++DMYAKCG A +F + ++++ WN +I G GM GH + A QM + G
Sbjct: 312 TALIDMYAKCGSTAEAWVVFQQMR--KKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSG 369
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEA 469
VK + TF +L +C+H GLI +GR+ F +MTKL + P ++HY C+VD+L RAG L EA
Sbjct: 370 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEA 429
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH--GEIAANYLFQL---EPEHTGYFVLMSNIYAAS 524
+I MP+P N + GALL C+IH E+A + L QL EP ++G +V++SNIY+
Sbjct: 430 HQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNR 489
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
+W + KLR DMK KG++K A S +E+ + F D+ +P ++YKK++ + +E+
Sbjct: 490 GRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 549
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K GY P + DVEDE++EH L +HSEKLA+AF ++ P ++VTKNLRVC+DCH
Sbjct: 550 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCH 609
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A + IS I R+IIVRD NRFH F G+CSCNDYW
Sbjct: 610 TAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 195/409 (47%), Gaps = 11/409 (2%)
Query: 43 HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
H+ ++ Y G + A+ +F+ + + + S W +I AY + G E + +
Sbjct: 107 HVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVS--WTALITAYMDAGDLREAVHVARNAF 164
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+G+ +S+T VL ACA + + G+ V + G +V A VD+Y KCG+
Sbjct: 165 ANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMA 224
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+VFD+M +D V+W M+ Y P EAL LF Q EG+ D + SA
Sbjct: 225 KAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACT 284
Query: 223 QLGDV-LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+LG + L QA+ + FL++ + +++ MYA+CG+ +A +VF M K+D+I WN
Sbjct: 285 RLGALDLGRQAIR-MVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWN 343
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIIN 340
+M+ G G A L +M+ S K N T + L+ +CT+ G Q GR+ FH
Sbjct: 344 AMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKL 403
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
++ ++D+ ++ G L A + +D+ P N L+ G +H + A
Sbjct: 404 YHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDM-PMPANAVILGALLGGCKIHRNAELAE 462
Query: 401 EFFSQM--LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
+Q+ LE +++ ++I S+ G ++ K DM + V+
Sbjct: 463 HVLTQLIRLEPWNSGNYVMLSNIY---SNRGRWEDAAKLRLDMKEKGVE 508
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/591 (37%), Positives = 343/591 (58%), Gaps = 8/591 (1%)
Query: 96 ELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
E S R S SN +L+ CA N ++E K HG IIR D + L++ Y
Sbjct: 47 EEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAY 106
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
+KCG + +VFD M R LVSW MI Y + EAL +F + + EG TI
Sbjct: 107 SKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTIS 166
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
SV SA G D L+ + +H ++ +L + +++ +YA+CG ++ A VF+ M+ +
Sbjct: 167 SVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
++W+SM+ GY+QN EALLL+ Q + N T ++ AC+ L + G++ H
Sbjct: 227 SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMH 286
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
I S + + ++ +DMYAKCG L + +F+++ E+N+ WN +I+G+ H
Sbjct: 287 AVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ--EKNLELWNTIISGFAKHAR 344
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
++ + F +M ++G+ P+ +TF+S+LS C H GL++EGR+ F M T + P V HY+
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPE 509
CMVD+LGRAG L EA+++IK +P P S+WG+LL +CR++ E+AA LF+LEPE
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPE 464
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
+ G VL+SNIYAA+ +W E+ K R+ +++ +KK S I+ + F + +P
Sbjct: 465 NAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPR 524
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
+E+ ++++ ++ + GY P + LHDVE +E +L HSEKLA+ FG+M L +
Sbjct: 525 IREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESS 584
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V++ KNLR+C DCH + S RR IIVRD NRFHHF G CSC D+W
Sbjct: 585 PVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 204/398 (51%), Gaps = 10/398 (2%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y+ G AR +F+ + S WNTMI Y N E L+++ MR G
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVS--WNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T VL AC N LE K +H ++T + YV AL+D+YAKCG D +V
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F+ M + V+W+ M+ Y Q + EEAL+L+++ Q+ L + T+ SV A L +
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 279
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
++ + +H + F ++ + +S V MYA+CG++ ++ ++F +++++L WN++++G+
Sbjct: 280 IEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGF 339
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKID 346
++ + E ++LF++MQ PN VT L+S C + G + GR+F + + + +
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 399
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ ++D+ + G L A + I P + S W L+A ++ + A ++
Sbjct: 400 VVHYSCMVDILGRAGLLSEAYELIKSI-PFDPTASIWGSLLASCRVYKNLELAEVAAEKL 458
Query: 407 LEEGVKPD----HITFTSILSACSHAGLIDEGRKCFAD 440
E ++P+ H+ ++I +A I + RK D
Sbjct: 459 FE--LEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 494
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/567 (38%), Positives = 342/567 (60%), Gaps = 29/567 (5%)
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
C + EG+ VH ++ G+ Y+ LV MYA+CG +D V D M R++VSW
Sbjct: 45 CVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSW 104
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
T MI+ Y Q E+P++A LF I+ + + + Q+ + VH +A+
Sbjct: 105 TAMISGYSQNERPDQAWELF--------------IMMLRAGIHQV------KQVHAFAVK 144
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
F + + +S++ MYA+ N+++AR VFDM+ RD++S+ ++L+GY Q G EAL L
Sbjct: 145 TNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDL 204
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F + N + N VT L++A + L S G++ HG I+ + L+N+++DMY+K
Sbjct: 205 FRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSK 264
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG L + +F+ + ER+V SWN ++ GYG HG + ++ F M +E VKPD +T
Sbjct: 265 CGKLLYSRRVFDSM--PERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-VKPDSVTLL 321
Query: 420 SILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
++LS SH GL+DEG F + K S +HY C++D+LGR+G L +A ++I++MP
Sbjct: 322 AVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPF 381
Query: 479 PPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKL 533
P ++WG+LL ACR+H GE A L +EPE+ G +V++SNIYAA+ W++V ++
Sbjct: 382 QPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRV 441
Query: 534 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
R+ M K + K S + K I FH+ +R +P +++ K++ + V IK AG++PDL
Sbjct: 442 RKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDL 501
Query: 594 SCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYI 653
SC LHDV+DE +E ML HSEKLA+ FG+M+ + +QV KNLR+C DCH+ +F+S +
Sbjct: 502 SCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKV 561
Query: 654 YRRKIIVRDANRFHHFEGGTCSCNDYW 680
Y R+I +RD NRFH G C+C DYW
Sbjct: 562 YGREISLRDKNRFHLITEGACTCGDYW 588
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 205/420 (48%), Gaps = 39/420 (9%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD + C L RQ+H+ + +G AL+L +++I Y G AR++ + +
Sbjct: 38 YDDAITECVERRALREGRQVHARMVAAGY-RPALYLATRLVIMYARCGALEDARNVLDGM 96
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W MI Y+ N + EL+ M R+GI +
Sbjct: 97 PERNVVS--WTAMISGYSQNERPDQAWELFIMMLRAGIH--------------------Q 134
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
K VH ++T F +V ++L+DMYAK + +VFD + RD+VS+T +++ Y Q
Sbjct: 135 VKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQ 194
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL LF+ EG+ + VT ++ +A+ L + + VHG + + +
Sbjct: 195 LGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMAL 254
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
QNS++ MY++CG + +R VFD M +R ++SWN+ML GY ++G A E + LF M + +
Sbjct: 255 QNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EV 313
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA-----VMDMYAKCGDL 363
KP+ VT L ++S ++ G G +I+ K +TL N V+D+ + G L
Sbjct: 314 KPDSVTLLAVLSGYSHGGLVDEGLDMFDHIV----KEQSTLLNTEHYGCVIDLLGRSGQL 369
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A N+ + P + + W L+ +H + EF +Q L + ++P++ ILS
Sbjct: 370 QKALNLIEKM-PFQPTRAIWGSLLGACRVHTNVHVG-EFVAQKLLD-IEPENAGNYVILS 426
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/576 (37%), Positives = 347/576 (60%), Gaps = 10/576 (1%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
+ +L C + + EG+ VH +I+T +L Y+ L+ +Y KC VFDEM
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
R++VSWT MI+ Y Q EAL LF + + + T +V S+ +
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
+H + + + + +S++ MYA+ G + +AR VF+ + +RD++S ++++GY Q G
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
EAL LF +Q N VT L++A + L + G++ H +++ + L+N+
Sbjct: 193 DEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNS 252
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-V 411
++DMY+KCG+L+ A +FN++ R V SWN ++ GY HG G + ++ F M EE V
Sbjct: 253 LIDMYSKCGNLNYARKIFNNM--PVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKV 310
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLS--VKPEVKHYACMVDMLGRAGCLYEA 469
KPD +TF ++LS CSH GL D+G + F +M ++ ++HY C++D+LGRAG + EA
Sbjct: 311 KPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEA 370
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAAS 524
F++IK+MP P ++WG+LL ACR+H GE L ++EPE+ G +V++SN+YA++
Sbjct: 371 FELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASA 430
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
+W +V +RE M K + K S IE + I F+ +DR +P +EV+ KV + V+
Sbjct: 431 GRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKF 490
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K +GY+PD SC L+DV++E +E +L HSEKLA+AFG+++ + ++V KNLR+C DCH
Sbjct: 491 KESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCH 550
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +F+S +Y R++ +RD NRFHH GG CSC DYW
Sbjct: 551 NFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 217/418 (51%), Gaps = 12/418 (2%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y+ LL C ++R+ +H+ + + + ++L ++II YT AR +F+ +
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYL-PPVYLSTRLIILYTKCECLGCARHVFDEM 71
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W MI Y+ G E L L+ M RS N +TF VL +C S
Sbjct: 72 RERNVVS--WTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFEL 129
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H I + + + +V ++L+DMYAK G+ + VF+ + RD+VS T +I+ Y Q
Sbjct: 130 GRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQ 189
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL LF + Q+EG+ S+ VT S+ +A+ L + + VH + + + +
Sbjct: 190 LGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVL 249
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
QNS++ MY++CGN+ AR +F+ M R +ISWN+ML GY ++G+ E + LF M+ +
Sbjct: 250 QNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENK 309
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDT 365
KP+ VT L ++S C++ G G + ++N +I+A + + V+D+ + G ++
Sbjct: 310 VKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEE 369
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A + + P E + W L+ +H + ++LE ++P++ ILS
Sbjct: 370 AFELIKKM-PFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLE--IEPENAGNYVILS 424
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/596 (38%), Positives = 357/596 (59%), Gaps = 30/596 (5%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M RSG S N++TFPF +K+CA+ SL + GK +H + +TG L + +VQ +L+ MY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 161 TDDGCKVFDE--MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
D+ K+FDE S + V + +++ Y + ++ ++LF + ++ G+ + VT++ +
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
G G++ VHG+ + D + N ++ MY + G ++ R +FD M ++ LI
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG----RKF 334
+WN+M+ GY QNG A+ L L+ EM++ P+P+T + ++S+C +LG+ +G RK
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
G+ +SN L NA+++MYA+CG+L A ++F+ + ++V SW +I GYGMHG
Sbjct: 241 EGFGFSSN----PFLNNALVNMYARCGNLKKARDIFDGM--PVKSVVSWTAIIGGYGMHG 294
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHY 453
G A+ F +M+ G+KPD F S+LSACSHAGL ++G F M K ++P +HY
Sbjct: 295 QGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHY 354
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEP 508
+CMVD+LGRAG L EA ++I+ M + + ++WGALL AC+IH E+A + +LEP
Sbjct: 355 SCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEP 414
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
+TGY+VL+SN+Y + + ++R M+ + LKK S +E+ + F DR +P
Sbjct: 415 TNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHP 474
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDL-SCALHDVEDEDREHMLN---YHSEKLAVAFGIMN 624
E+YKK+ + +K DL C +D E RE LN HSEKLAVAF ++N
Sbjct: 475 QTNEIYKKLNELENLVK------DLDGCKKND--HERREEYLNSMGVHSEKLAVAFALLN 526
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
E + + KNLR+C DCH + +S I R+ +VRDA RFHHF+ G CSC +YW
Sbjct: 527 TRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 208/428 (48%), Gaps = 9/428 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G S F + +KSC L+ + +Q+H + +G + + + +I Y
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPF-VQTSLISMYGKCS 59
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+ AR LF+ + + +N+++ YA N + + L+ MR G+ N T +
Sbjct: 60 LIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGL 119
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
++ C + G VHG ++ G DS V L+ MY K G+ D G K+FDEM + L
Sbjct: 120 VQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL 179
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
++W MI Y Q L L+++ + +G D +T+V V S+ LG + + V
Sbjct: 180 ITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERK 239
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
F + + N++V MYARCGN++KAR +FD M + ++SW +++ GY +GQ A
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVA 299
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMD 355
+ LFDEM KP+ + ++SAC++ G G + G + ++ A + ++D
Sbjct: 300 VGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVD 359
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+ + G L+ A + + + + W L+ +H + A F Q++E ++P +
Sbjct: 360 LLGRAGRLNEARELIESMQ-VRADGALWGALLGACKIHRNVELAELAFEQVIE--LEPTN 416
Query: 416 ITFTSILS 423
+ +LS
Sbjct: 417 TGYYVLLS 424
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/665 (34%), Positives = 378/665 (56%), Gaps = 54/665 (8%)
Query: 54 TYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTF 113
TYG + A LF+S+ S WN M+ A + +G E L++ M+ G+ +S T+
Sbjct: 217 TYG-VDHALELFDSMPERDVVS--WNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTY 273
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
L ACA S + GK +H +IR D YV +ALV++YAKCG + VF+ +
Sbjct: 274 TSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHD 333
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
R+ V+WTV+I + Q E++ LF + + E + D + ++ S D+ + +
Sbjct: 334 RNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 393
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARC-------------------------------GNV 262
H + + ++ + + NS+++MYA+C GN+
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNI 453
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSA 321
KAR FD M +++I+WN+ML YIQ+G + L +++ M D +P+ VT + L
Sbjct: 454 AKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKG 513
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C LG+ +LG + G + + +D ++ NAV+ MY+KCG + A +F+ ++ +++
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNV--KDIV 571
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SWN +I GY HG G++A+E F +L+ G KPD+I++ ++LS CSH+GL+ EG+ F M
Sbjct: 572 SWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMM 631
Query: 442 TKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG---- 496
++ ++ P ++H++CMVD+LGRAG L EA D+I +MP+ P VWGALL AC+IHG
Sbjct: 632 KRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNEL 691
Query: 497 -EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
E+AA ++F+L+ +G ++LM+ IYA + K + ++R+ M++KG+KK +S +E
Sbjct: 692 AELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNN 751
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D +P + KK++ + +I GY+ D R + +HSEK
Sbjct: 752 KVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVR---------TDSPRSEI--HHSEK 800
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVAFG+M+L + + KNLR+C DCH+ + IS + R+ ++RDA RFHHF GG+CS
Sbjct: 801 LAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCS 860
Query: 676 CNDYW 680
C DYW
Sbjct: 861 CGDYW 865
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 137/542 (25%), Positives = 245/542 (45%), Gaps = 84/542 (15%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISS-NS 110
Y G + A LF + S WNT++ Y + + +LE + +M RSG SS N+
Sbjct: 81 YVKLGRLSDAVELFGRMPARDVAS--WNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNA 138
Query: 111 YTFPFVLKACAS---NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD----- 162
+TF + +K+C + SL L+ + G + + G DS V AALVDM+ +CG D
Sbjct: 139 FTFAYAMKSCGALGERSLALQ---LLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRL 195
Query: 163 --------------------------DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++FD M RD+VSW +M++A Q+ + EAL
Sbjct: 196 FVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREAL 255
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+ Q +G+ DS T S +A +L + + +H I N D + +++V +Y
Sbjct: 256 DMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELY 315
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+CG ++A+ VF+ + R+ ++W ++ G++Q+G +E++ LF++M+ +
Sbjct: 316 AKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALA 375
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP- 375
L+S C LGR+ H + S + N+++ MYAKC +L +AE++F ++
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEK 435
Query: 376 ----------------------------SERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
S +NV +WN ++ Y HG L ++ ML
Sbjct: 436 DIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVML 495
Query: 408 -EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
E+ V+PD +T+ ++ C+ G G + K+ + + ++ M + G +
Sbjct: 496 SEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRI 555
Query: 467 YEA---FDMIKQMPLPPNDSVWGALLLACRIHG------EIAANYLFQ-LEPEHTGYFVL 516
EA FD + + W A++ HG EI + L + +P++ Y +
Sbjct: 556 LEARKVFDFLNVKDIVS----WNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAV 611
Query: 517 MS 518
+S
Sbjct: 612 LS 613
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%), Gaps = 34/307 (11%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS- 209
+++ Y K G+ D ++F M RD+ SW +++ Y Q+++ +L F + G S
Sbjct: 77 MLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSP 136
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA-RL- 267
++ T + G LG+ A + G +D + ++V M+ RCG V+ A RL
Sbjct: 137 NAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLF 196
Query: 268 -----------------------------VFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
+FD M +RD++SWN M++ Q+G+ EAL
Sbjct: 197 VRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 256
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
+ +MQ+ + + T ++AC L S + G++ H +I + ID + +A++++YA
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYA 316
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG A+ +FN +H +RN +W VLIAG+ HG +++E F+QM E + D
Sbjct: 317 KCGCFKEAKGVFNSLH--DRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFAL 374
Query: 419 TSILSAC 425
+++S C
Sbjct: 375 ATLISGC 381
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 143/326 (43%), Gaps = 52/326 (15%)
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLE------------DLCIQNSIVAMYARCGNV 262
V +ASAV L+ +H Y C A + ++ N ++ Y + G +
Sbjct: 33 VGLASAV-----FLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRL 87
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS-DCKPNPVTALILVSA 321
A +F M RD+ SWN++++GY Q+ Q +L F M S D PN T + +
Sbjct: 88 SDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKS 147
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI-HPS---- 376
C LG R L + G + + D+ + A++DM+ +CG +D A +F I P+
Sbjct: 148 CGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCR 207
Query: 377 ------------------------ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
ER+V SWN++++ G R+AL+ M +GV+
Sbjct: 208 NSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTK--LSVKPEVKHYACMVDMLGRAGCLYEAF 470
D T+TS L+AC+ + G++ A + + + P V + +V++ + GC EA
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVA--SALVELYAKCGCFKEAK 325
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHG 496
+ + N+ W L+ HG
Sbjct: 326 GVFNSLH-DRNNVAWTVLIAGFLQHG 350
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/681 (35%), Positives = 387/681 (56%), Gaps = 24/681 (3%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL+SC LR+ +H+ L SG + L +I Y+ + +A LF ++
Sbjct: 176 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRR 235
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ S W T++ + N + L ++ MRR+G++ + +A A+ L +
Sbjct: 236 NAVS--WTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARS 293
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
GF ++ +V + L DMY+KCG + C+VFD+M +D V+WT MI Y +
Sbjct: 294 CTASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 352
Query: 192 PEEALILFQKTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
E A++ F+ ++EGL+ +D SV SA G L D ++++H F ++ ++N
Sbjct: 353 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 412
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWN-----SMLTGYIQNGQASEALLLFDEMQN 305
+++ MYA+ +VE A V K D WN SM+ GYI+ EAL+++ E++
Sbjct: 413 ALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 468
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+PN T ++ C + G + H +I +++ D+ + + ++DMY KCG +
Sbjct: 469 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISL 528
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
+ +FN+I R +WN +I + HGHGR+A++ F +M+ G++P+HI F S+L+AC
Sbjct: 529 SMQLFNEIE--YRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 586
Query: 426 SHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SHAGL+DEG K F M + ++P+ +HY+C++D GRAG L EA+ I +MP+ PN
Sbjct: 587 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 646
Query: 485 WGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W +LL ACR+ G E+AA L +LEP +TG V +S IYA+ +W +V +R+ M++
Sbjct: 647 WCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRD 706
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
+KK FS ++ K F + D +P K++Y+K+E + IK GY+PD S +
Sbjct: 707 SRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCN 766
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
+ED +E +L YHSE++AVAF ++++ + V KNLR+C DCH+AF+FI + RR II
Sbjct: 767 LEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDII 826
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRD +RFHHF G CSC DYW
Sbjct: 827 VRDNSRFHHFVNGRCSCGDYW 847
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 139/346 (40%), Gaps = 56/346 (16%)
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHG-YAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
+ +V + S+ + G+ GD+ + + +H + A + N ++ MY+ C ++ A
Sbjct: 18 ATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALR 77
Query: 268 VFDMMEKRDLISWNSMLTGYIQN----------------GQASEALLLFDEMQN------ 305
+F M +R+ +SW ++++G QN G A L+ + N
Sbjct: 78 LFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKH 137
Query: 306 ----SDC-----------------KPNPVTALI-----LVSACTYLGSRQLGRKFHGYII 339
S C P P A L+ +C G + GR H ++
Sbjct: 138 TLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLV 197
Query: 340 NSNMKIDAT-LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
S +T L N ++ MY+ C DL +A +F + RN SW L++G +
Sbjct: 198 LSGAAAASTFLANHLITMYSHCADLASALRLFAAM--PRRNAVSWTTLVSGLSQNLMHAD 255
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
AL F+ M GV P +S A + G R C A + + E+ + + D
Sbjct: 256 ALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASAS-VGFDTELFVASNLAD 314
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIAANYL 503
M + G L EA + QM P D+V W A++ +G + A L
Sbjct: 315 MYSKCGLLSEACRVFDQM--PQKDAVAWTAMIDGYAKNGSLEAAVL 358
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDS-YVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
+L++C + G+++H ++ +G + S ++ L+ MY+ C ++F M R
Sbjct: 26 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRR 85
Query: 175 DLVSWTVMITAYEQ 188
+ VSWT +++ Q
Sbjct: 86 NAVSWTTLVSGLSQ 99
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/574 (38%), Positives = 347/574 (60%), Gaps = 12/574 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L C S I EG+ VH +I+T +L Y++ L+ +Y KC D ++FDEM ++
Sbjct: 96 ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKN 155
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV-ASAVGQLGDVLKAQAVH 234
+VSWT MI+AY Q EAL LF + + + T ++ S G LG + +H
Sbjct: 156 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG-FETGRQIH 214
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
AI + + + +S++ MYA+ G + A VF + +RD+++ ++++GY Q G
Sbjct: 215 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 274
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EAL LF ++Q N VT +++A + L + G++ H +++ S L N+++
Sbjct: 275 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 334
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKP 413
DMY+KCG++ A +F+ + ER SWN ++ GY HG R+ LE F M EE VKP
Sbjct: 335 DMYSKCGNVCYARRIFDSM--PERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 392
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
D IT+ ++LS CSH L D G + F +M K ++P++ HY C+VD+LGRAG + EAFD
Sbjct: 393 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFD 452
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
IK+MP P ++WG+LL +CR+H G I L +LEPE+ G +V++SN+YA++ K
Sbjct: 453 FIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGK 512
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W ++ +R+ M+ K + K S +E + + FH +D +P +EV KKV+ ++++ K
Sbjct: 513 WEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFKE 572
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY+PDLSC L+DV++E +E +L HSEKLA+AFG++ ++V KNLR+C DCHS
Sbjct: 573 DGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSF 632
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+F+S +Y R +I+RD NRFH+ GG CSC DYW
Sbjct: 633 AKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 215/418 (51%), Gaps = 12/418 (2%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD +L C ++R+ +H+ + + + +++L ++I+ Y AR +F+ +
Sbjct: 93 YDTILNECVSQRAIREGQRVHTHMIKTCYL-PSVYLRTRLIVLYNKCDCLGDAREMFDEM 151
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W MI AY+ G E L L+ M RS N +TF +L +C +
Sbjct: 152 PQKNVVS--WTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFET 209
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H I+ + S +V ++L+DMYAK G+ D VF + RD+V+ T +I+ Y Q
Sbjct: 210 GRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQ 269
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL LF++ Q EG+ S+SVT SV +A+ L + + VH + + + + +
Sbjct: 270 MGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVL 329
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
NS++ MY++CGNV AR +FD M +R ISWN+ML GY ++G A E L LF M+ +
Sbjct: 330 LNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENK 389
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDT 365
KP+ +T L ++S C++ +G + ++N I+ + + V+D+ + G ++
Sbjct: 390 VKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEE 449
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A + + P + W L+ +H + ++LE ++P++ ILS
Sbjct: 450 AFDFIKKM-PFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE--LEPENAGNYVILS 504
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/641 (35%), Positives = 359/641 (56%), Gaps = 12/641 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I YT + A ++F+ I + +S W M+ A+A N + M GI+
Sbjct: 16 LIDLYTKCDRFDDALAVFHGIQSKNVFS--WTMMLAAFAENRDFDRCWLFFRGMLLQGIN 73
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
L AC I G+ + I+ TG +S VQ ALV +Y K G D V
Sbjct: 74 PGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASV 133
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F MS RD+V+W+ M+ AY + P EAL LF++ +G+ + VT+VS A LGD+
Sbjct: 134 FLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL 193
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+H + + ++V +Y +CG +E A F + ++++++W+++ Y
Sbjct: 194 RSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAY 253
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG--YIINSNMKI 345
+N + +A+ + M PN T + ++ AC + + + GR+ H +++ ++
Sbjct: 254 ARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLES 313
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + A+++MY+KCG+L A NMF+ I + ++ WN LIA HG KALE F +
Sbjct: 314 DVYVLTALVNMYSKCGNLALAGNMFDKI--AHLDLVLWNSLIATNAQHGQTEKALELFER 371
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDMLGRAG 464
M EG++P ITFTS+L ACSHAG++D+GRK F + + PE +H+ CMVD+LGRAG
Sbjct: 372 MRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAG 431
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH----GEI-AANYLFQLEPEHTGYFVLMSN 519
+ ++ D++ MP P+ W A L ACR + G I AA LFQL+P +VL+SN
Sbjct: 432 WIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLSN 491
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
+YA + +W +V ++R+ M+ K A S IE + F + D +P E++ +++
Sbjct: 492 MYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQR 551
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ +K AGY+PD LHDV+ E +E M+ YHSEKLA+AF ++ + ++V KNLRV
Sbjct: 552 LTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRV 611
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
CNDCH+A +FIS + R+I+VRD NRFH F+ G CSC DYW
Sbjct: 612 CNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 178/363 (49%), Gaps = 11/363 (3%)
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
G++ + ++ L+D+Y KC + DD VF + +++ SWT+M+ A+ + + + F
Sbjct: 5 GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ +G+ V I SA ++ +++ + E+ +Q ++V++Y +
Sbjct: 65 RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKL 124
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G+ A VF M RD+++W++M+ Y +NG EAL LF +M PN VT + +
Sbjct: 125 GHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGL 184
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC LG + G H + ++ + A++++Y KCG ++ A F I E+N
Sbjct: 185 DACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI--VEKN 242
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V +W+ + A Y + R A+ +M EG+ P+ TF S+L AC+ + +GR+
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHE 302
Query: 440 DMTKL--SVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRI 494
+ L ++ +V +V+M + G L A FD I + L +W +L+
Sbjct: 303 RIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDL----VLWNSLIATNAQ 358
Query: 495 HGE 497
HG+
Sbjct: 359 HGQ 361
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/659 (35%), Positives = 369/659 (55%), Gaps = 17/659 (2%)
Query: 35 SGLINQALHLGAKII---IKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHC 91
+G + + +G ++I +K + + +AR +F+ + + W MI A G+
Sbjct: 185 TGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVT--WTLMITRLAQYGYN 242
Query: 92 VETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA 150
E ++L+ M SG + +T ++ CA + GK +H +IR+G + D V +
Sbjct: 243 DEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCS 302
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK--PEEALILFQKTQ-QEGL 207
LVDMYAKCG + KVFD M +++SWT ++ Y + EA+ +F Q G+
Sbjct: 303 LVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGV 362
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
+ T V A L D + VHG I C+ N +V++YA+ G +E AR
Sbjct: 363 APNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARK 422
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
FD++ +++L+S + +++ + L E++ + T L+S +G+
Sbjct: 423 CFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGT 482
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
G + H ++ + D ++ NA++ MY+KCG+ + A +FND+ + NV +W +I
Sbjct: 483 IGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDM--EDCNVITWTSII 540
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSV 446
G+ HG KALE F MLE GVKP+ +T+ ++LSACSH GLIDE K F M +
Sbjct: 541 NGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGI 600
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAAN 501
P ++HYACMVD+LGR+G L EA + I MP + VW L +CR+H GE AA
Sbjct: 601 VPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAK 660
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
+ + EP ++L+SN+YA +W +V +R++MK K + K A S IE + FH
Sbjct: 661 MILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFH 720
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
D ++P +++Y+K++ +A++IK GY+P+ LHDVEDE +E L HSEKLAVAF
Sbjct: 721 VGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFA 780
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ ++V KNLRVC DCH+A ++IS + R+I+VRDANRFHH + GTCSCNDYW
Sbjct: 781 LISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 261/535 (48%), Gaps = 33/535 (6%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ +H LTTS L L L + I + Y+ +P TA S+F S+ N K ++++I +
Sbjct: 72 KLLHHKLTTSNLPLDTLLLNSLITL-YSKSNDPITAFSIFQSMENSKRDVVSYSSIISCF 130
Query: 86 ANNGHCVETLELYST-MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
ANN +C++ +E++ + + G+ N Y F V++AC G + G +++TG+ D
Sbjct: 131 ANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYF-D 189
Query: 145 SYVQAA--LVDMYAK-CGQTD--DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
S+V L+DM+ K C D KVFD+M +++V+WT+MIT Q +EA+ LF
Sbjct: 190 SHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLF 249
Query: 200 -QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
+ G + D T+ + S ++ + + +H + I + + DLC+ S+V MYA+
Sbjct: 250 LEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAK 309
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA--SEALLLFDEM-QNSDCKPNPVTA 315
CG V++AR VFD M + +++SW +++ GY++ G EA+ +F M PN T
Sbjct: 310 CGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTF 369
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++ AC L G + HG I + + N ++ +YAK G +++A F+ +
Sbjct: 370 SGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLF- 428
Query: 376 SERNVSSWNVL----IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
E+N+ S V+ + + + + + L+ + + GV T+ S+LS + G I
Sbjct: 429 -EKNLVSETVVDDTNVKDFNL--NSEQDLDREVEYVGSGVSS--FTYASLLSGAACIGTI 483
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G + A + K+ + ++ ++ M + G A + M N W +++
Sbjct: 484 GKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDME-DCNVITWTSIING 542
Query: 492 CRIHG------EIAANYL-FQLEPEHTGYFVLM---SNIYAASNKWREVGKLRED 536
HG E+ N L ++P Y ++ S++ W+ +R++
Sbjct: 543 FAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDN 597
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 181/366 (49%), Gaps = 15/366 (4%)
Query: 92 VETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAAL 151
+ TL L T S ++ T +LK C GK++H + + D+ + +L
Sbjct: 36 ITTLNLTDT--ESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSL 93
Query: 152 VDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKPEEALILF-QKTQQEGLL 208
+ +Y+K +F M S RD+VS++ +I+ + +A+ +F Q Q+G+
Sbjct: 94 ITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVY 153
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED-LCIQNSIVAMYAR---CGNVEK 264
+ +V A + G + G+ + + + +C+ ++ M+ + ++E
Sbjct: 154 PNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLES 213
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACT 323
AR VFD M ++++++W M+T Q G EA+ LF EM +S P+ T L+S C
Sbjct: 214 ARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCA 273
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ LG++ H ++I S + +D + +++DMYAKCG + A +F+ + E NV SW
Sbjct: 274 EIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR--EHNVMSW 331
Query: 384 NVLIAGY--GMHGHGRKALEFFSQM-LEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
L+ GY G G+ R+A+ FS M L+ GV P+ TF+ +L AC+ D G +
Sbjct: 332 TALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQ 391
Query: 441 MTKLSV 446
KL +
Sbjct: 392 TIKLGL 397
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/662 (35%), Positives = 377/662 (56%), Gaps = 15/662 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H + SGL + + ++ Y+ G+ A +F+ + S WN+M+ ++
Sbjct: 281 RGLHGMVVKSGLESNVC-VCNSLLSMYSQAGKSEDAEFVFHKMRERDLIS--WNSMMASH 337
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+NG+ LEL M ++ ++N TF L AC + + K+VH +I G +
Sbjct: 338 VDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNL 394
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ ALV MY K G +V M RD V+W +I + ++P A+ F ++E
Sbjct: 395 IIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREE 454
Query: 206 GLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G+ + +TIV++ SA D+L +H + + F + +Q+S++ MYA+CG++
Sbjct: 455 GVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNT 514
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
+ +FD++ ++ +WN++L+ G EAL L +M+N + + + +
Sbjct: 515 SNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGN 574
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L G++ H II + + + NA MDMY KCG++D + P R+ SWN
Sbjct: 575 LTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILP--QPRSRSQRSWN 632
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TK 443
+LI+ HG ++A E F +ML+ G++PDH+TF S+LSACSH GL+DEG F+ M TK
Sbjct: 633 ILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTK 692
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI----- 498
V ++H C++D+LGRAG L EA + I +MP+PP D VW +LL AC+IHG +
Sbjct: 693 FGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARK 752
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
AA+ LF+L+ +VL SN+ A++ +WR+V +R+ M++ +KK A S ++ +
Sbjct: 753 AADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVT 812
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D+ +P E+Y K+E + I+ AGYMPD S +L D ++E +EH L HSE++A+
Sbjct: 813 TFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIAL 872
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AFG++N + + +++ KNLRVC DCHS F+ +S I RKII+RDA RFHHF G CSC+D
Sbjct: 873 AFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSD 932
Query: 679 YW 680
YW
Sbjct: 933 YW 934
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 228/469 (48%), Gaps = 16/469 (3%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ + GL +G ++ Y T+G +F I S W +++ YA
Sbjct: 80 QVHAHVIKCGLACDVF-VGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVS--WTSLMVGYA 136
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG E + +Y +RR G+ N V+++C + G V G +I++G +
Sbjct: 137 YNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVS 196
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V +L+ M+ C ++ VFD+M RD +SW +ITA E++L F + +
Sbjct: 197 VANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTH 256
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+D +TI ++ G ++ + +HG + + ++C+ NS+++MY++ G E A
Sbjct: 257 AKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAE 316
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VF M +RDLISWNSM+ ++ NG AL L EM + N VT +SAC L
Sbjct: 317 FVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLE 376
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ ++ H ++I + + + NA++ MY K G + A+ + I P +R+ +WN L
Sbjct: 377 TLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCK-IMP-DRDEVTWNAL 431
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA-CSHAGLIDEGRKCFADMTKLS 445
I G+ + A+E F+ + EEGV ++IT ++LSA S L+D G A +
Sbjct: 432 IGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAG 491
Query: 446 VKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLA 491
+ E + ++ M + G L + FD++ N S W A+L A
Sbjct: 492 FELETFVQSSLITMYAQCGDLNTSNYIFDVLAN----KNSSTWNAILSA 536
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 226/439 (51%), Gaps = 9/439 (2%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ +G A+ +F+ + S WN ++ + G + ++ + M G+ +SY
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEAS--WNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY 59
Query: 112 TFPFVLKACASNSLILEGKV-VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
++ AC + + EG VH +I+ G D +V +L+ Y G + VF E
Sbjct: 60 VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+ ++VSWT ++ Y +E + ++++ +++G+ + + +V + G L D +
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
V G I + + + NS+++M+ C ++E+A VFD M++RD ISWNS++T + N
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G ++L F +M+ + K + +T L+ C + + GR HG ++ S ++ + +
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N+++ MY++ G + AE +F+ + ER++ SWN ++A + +G+ +ALE +ML+
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMR--ERDLISWNSMMASHVDNGNYPRALELLIEMLQTR 357
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
+++TFT+ LSAC + ++ + A + L + + +V M G+ G + A
Sbjct: 358 KATNYVTFTTALSACYN---LETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQ 414
Query: 471 DMIKQMPLPPNDSVWGALL 489
+ K MP ++ W AL+
Sbjct: 415 RVCKIMP-DRDEVTWNALI 432
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY+K G + VFD+M R+ SW +++ + + ++A+ F + G+ S
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 214 IVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
S+ +A + G + + A VH + I D+ + S++ Y G V + +VF +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
E+ +++SW S++ GY NG E + ++ ++ N ++ +C L + LG
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ G +I S + ++ N+++ M+ C ++ A +F+D+ ER+ SWN +I
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDM--KERDTISWNSIITASVH 238
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
+GH K+LE+FSQM K D+IT +++L C A + GR + K ++ V
Sbjct: 239 NGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCV 298
Query: 453 YACMVDMLGRAG 464
++ M +AG
Sbjct: 299 CNSLLSMYSQAG 310
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 18/265 (6%)
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY++ G++E A+ VFD M +R+ SWN++++G+++ G +A+ F M +P+
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 315 ALILVSACTYLGSRQLGR-KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
A LV+AC G G + H ++I + D + +++ Y G + + +F +I
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
E N+ SW L+ GY +G ++ + + ++ +GV + +++ +C L+D+
Sbjct: 121 --EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSC--GVLVDK 176
Query: 434 --GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV-WGA 487
G + + K + V ++ M G + EA FD +K+ D++ W +
Sbjct: 177 MLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKE-----RDTISWNS 231
Query: 488 LLLAC--RIHGEIAANYLFQLEPEH 510
++ A H E + Y Q+ H
Sbjct: 232 IITASVHNGHCEKSLEYFSQMRYTH 256
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/675 (34%), Positives = 370/675 (54%), Gaps = 14/675 (2%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK C +L+Q IHS + G +G ++ Y+ G A +F +I
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEF-IGCGLVDMYSKCGLAIDAIGVFKTI--K 376
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
K +W+ +I G E+++L+ MR N YT +L A + + G+
Sbjct: 377 KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS 436
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H + + GF +D V ALV MY K G DG K+++ M RDL+SW ++
Sbjct: 437 IHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGM 496
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ L +F +EG + + T +S+ + L DV + VH + I N ++ + +
Sbjct: 497 YDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTA 556
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MYA+C +E A + F+ + RDL +W ++T Y Q Q +AL F +MQ KPN
Sbjct: 557 LIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPN 616
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T +S C+ L S + G++ H + S D + +A++DMYAKCG ++ AE +F
Sbjct: 617 EFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFE 676
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ R+ +WN +I GY +G G KAL F ML+EG+ PD +TFT ILSACSH GL+
Sbjct: 677 AL--IRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG++ F M + + P V H ACMVD+LGR G E D I++M L N +W +L
Sbjct: 735 EEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLG 794
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
A ++H GE AAN LF+L+PE ++L+SNI+A +W +V ++R M +KG+KK
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S +E + F + D +P +E++ K++ + E+ Y+P LH+V + ++
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEK 914
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ L +HSE+LA+ F +++ + E +++ KNLR+C DCH + IS I ++I+VRD R
Sbjct: 915 KENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRR 974
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSCND+W
Sbjct: 975 FHHFKNGACSCNDFW 989
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 235/457 (51%), Gaps = 8/457 (1%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LK+C+ +L +Q+H+ GL+ L +G+ ++ Y GE A +F I +
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLLLD-LFVGSALVDLYAKCGEIELASKMF--IGMPE 276
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
WN ++ YA G L+L+ +M + N +T VLK CA++ + +G+V+
Sbjct: 277 QNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVI 336
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H II+ G+ + ++ LVDMY+KCG D VF + D+V W+ +IT +Q +
Sbjct: 337 HSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQS 396
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EE++ LF + L + TI S+ SA G++ Q++H F D+ + N++
Sbjct: 397 EESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNAL 456
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V MY + G V +++ M RDLISWN+ L+G G L +F M PN
Sbjct: 457 VTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNM 516
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T + ++ +C+ L GR+ H +II + + + + A++DMYAKC L+ A+ FN
Sbjct: 517 YTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNR 576
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ S R++ +W V+I Y G KAL +F QM +EGVKP+ T LS CS ++
Sbjct: 577 L--SVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLE 634
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
G++ + + K ++ + +VDM + GC+ EA
Sbjct: 635 GGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 233/505 (46%), Gaps = 13/505 (2%)
Query: 11 FYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+Y +L+ C SL + IH L +IN HL ++ Y AR +
Sbjct: 114 YYSSMLRECASKRSLGVAKAIHG-LIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAK 172
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ + S W +I+ G +++ L+ M+ GI N +T LKAC+ +
Sbjct: 173 MPDRDVVS--WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALD 230
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
GK +H + G L D +V +ALVD+YAKCG+ + K+F M ++ V+W V++ Y
Sbjct: 231 LGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYA 290
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q L LF + + + T+ +V ++ + Q +H I + +
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
I +V MY++CG A VF ++K D++ W++++T Q GQ+ E++ LF M+ D
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN T L+SA T G+ Q G+ H + + D + NA++ MY K G +
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
++ + +R++ SWN ++G G + L F MLEEG P+ TF SIL +CS
Sbjct: 471 KLYESM--VDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY-EAFDMIKQMPLPPNDSVWG 486
+ GR+ A + K + ++DM A C+Y E D+ + W
Sbjct: 529 LFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMY--AKCMYLEDADVAFNRLSVRDLFTWT 586
Query: 487 ALLL--ACRIHGEIAANYLFQLEPE 509
++ A GE A NY Q++ E
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQE 611
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/672 (34%), Positives = 377/672 (56%), Gaps = 15/672 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L++C + L +++H + G + + +I Y G+ +AR LF+ +
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y NG C E LEL+ MR + + T V+ AC G+
Sbjct: 261 DIIS--WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I TGF D V +L MY G + K+F M +D+VSWT MI+ YE
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P++A+ ++ Q+ + D +T+ +V SA LGD+ +H AI + + + N+
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY++C ++KA +F + ++++ISW S++ G N + EAL+ +M+ + +PN
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPN 497
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T ++AC +G+ G++ H +++ + + +D L NA++DMY +CG ++TA + FN
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN 557
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+++V+SWN+L+ GY G G +E F +M++ V+PD ITF S+L CS + ++
Sbjct: 558 S---QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G F+ M V P +KHYAC+VD+LGRAG L EA I++MP+ P+ +VWGALL A
Sbjct: 615 RQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIH GE++A ++F+L+ + GY++L+ N+YA KWREV K+R MK GL A
Sbjct: 675 CRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA 734
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S +E + F + D+ +P KE+ +E ++ G + D + R+
Sbjct: 735 GCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRD 794
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
+ HSE+ A+AFG++N P + VTKNL +C +CH +FIS RR+I VRDA F
Sbjct: 795 EIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHF 854
Query: 667 HHFEGGTCSCND 678
HHF+ G CSC D
Sbjct: 855 HHFKDGECSCGD 866
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 222/441 (50%), Gaps = 6/441 (1%)
Query: 31 SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGH 90
S+ S + + + LG + + +G A +F + +S WN ++ YA G+
Sbjct: 118 SIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFS--WNVLVGGYAKQGY 175
Query: 91 CVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA 149
E + LY M G+ + YTFP VL+ C + GK VH ++R G+ D V
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
AL+ MY KCG +FD M RD++SW MI+ Y + E L LF + +
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D +T+ SV SA LGD + +H Y I F D+ + NS+ MY G+ +A +F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
ME++D++SW +M++GY N +A+ + M KP+ +T ++SAC LG
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G + H I + + + N +++MY+KC +D A ++F++I +NV SW +IAG
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI--PRKNVISWTSIIAG 473
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
++ +AL F QM + ++P+ IT T+ L+AC+ G + G++ A + + V +
Sbjct: 474 LRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 450 VKHYACMVDMLGRAGCLYEAF 470
++DM R G + A+
Sbjct: 533 DFLPNALLDMYVRCGRMNTAW 553
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
L G NG+ EA+ L + MQ + + LV C + +++ G K + ++S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ L NA + M+ + G+L A +F + SERN+ SWNVL+ GY G+ +A+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKM--SERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 404 SQML-EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
+ML GVKPD TF +L C + G++ + + + ++ ++ M +
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 463 AGCLYEAFDMIKQMP 477
G + A + +MP
Sbjct: 244 CGDVKSARLLFDRMP 258
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/663 (34%), Positives = 372/663 (56%), Gaps = 12/663 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H+ + + L +I Y+ P +AR + S W ++I
Sbjct: 26 RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVS--WTSLISGL 83
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A NGH L + MRR G+ N +TFP KA AS L + GK +H ++ G + D
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V + DMY K DD K+FDE+ R+L +W I+ +P EA+ F + ++
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+S+T + +A + +HG + + F D+ + N ++ Y +C + +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
++F M ++ +SW S++ Y+QN + +A +L+ + + + ++SAC +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+LGR H + + + ++ + +A++DMY KCG ++ +E F+++ E+N+ + N
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM--PEKNLVTRNS 381
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGV--KPDHITFTSILSACSHAGLIDEGRKCFADM-T 442
LI GY G AL F +M G P+++TF S+LSACS AG ++ G K F M +
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE----- 497
++P +HY+C+VDMLGRAG + A++ IK+MP+ P SVWGAL ACR+HG+
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+AA LF+L+P+ +G VL+SN +AA+ +W E +RE++K G+KK A +S I +
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F DR + KE+ + + E++ AGY PDL +L+D+E+E++ +++HSEKLA
Sbjct: 562 HAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLA 621
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+AFG+++L +++TKNLR+C DCHS F+F+S +R+IIVRD NRFH F+ G CSC
Sbjct: 622 LAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCK 681
Query: 678 DYW 680
DYW
Sbjct: 682 DYW 684
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 179/364 (49%), Gaps = 3/364 (0%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
+LK S S + G+VVH I++T ++ L++MY+K + V
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
R++VSWT +I+ Q AL+ F + ++EG++ + T AV L + + +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H A+ + D+ + S MY + + AR +FD + +R+L +WN+ ++ + +G+
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EA+ F E + D PN +T ++AC+ LG + HG ++ S D ++ N +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+D Y KC + ++E +F ++ +N SW L+A Y + KA + + ++ V+
Sbjct: 251 IDFYGKCKQIRSSEIIFTEM--GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+S+LSAC+ ++ GR A K V+ + + +VDM G+ GC+ ++
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 474 KQMP 477
+MP
Sbjct: 369 DEMP 372
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/659 (37%), Positives = 365/659 (55%), Gaps = 49/659 (7%)
Query: 55 YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
Y AR LF+ + S WN M+ YA NG+ E E++ M NS ++
Sbjct: 43 YRNLRAARLLFDQMPERDVVS--WNAMLSGYAQNGYVKEAKEIFDEM----PCKNSISWN 96
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
+L A N I + + + +S ++ Y K + D +FD M R
Sbjct: 97 GMLAAYVQNGRIEDARRLFESKADWELIS----WNCMMGGYVKRNRLVDARGIFDRMPER 152
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
D VSW MI+ Y Q + EA LF+ E + D T ++ S Q G + +A+ V
Sbjct: 153 DEVSWNTMISGYAQNGELLEAQRLFE----ESPVRDVFTWTAMVSGYVQNGMLDEARRVF 208
Query: 235 ----------------GYAICNAF-----------LEDLCIQNSIVAMYARCGNVEKARL 267
GY C +++ N+++ YA+ G++ +AR
Sbjct: 209 DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARN 268
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
FD M +RD ISW +++ GY Q+G EAL LF EM+ + N T +S C + +
Sbjct: 269 FFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAA 328
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
+LG++ HG ++ + ++ + NA++ MY KCG++D A +F I E+ V SWN +I
Sbjct: 329 LELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI--EEKEVVSWNTMI 386
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSV 446
AGY HG G++AL F M + G+ PD +T +LSACSH GL+D+G + F MT+ +
Sbjct: 387 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGI 446
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAAN 501
KHY CM+D+LGRAG L +A +++K MP P+ + WGALL A RIHG E AA
Sbjct: 447 TANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAK 506
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
+F++EP+++G +VL+SN+YAAS +W +VG++R M+++G+KK +S +E I F
Sbjct: 507 MIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFT 566
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
D V+P +Y +E + +++K GY+ LHDVE+E++ HML YHSEKLAVAFG
Sbjct: 567 VGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFG 626
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I+ + ++V KNLRVC DCH+A + IS I R II+RD++RFHHF GG CSC DYW
Sbjct: 627 ILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 145/317 (45%), Gaps = 36/317 (11%)
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
R N+ ARL+FD M +RD++SWN+ML+GY QNG EA +FDEM CK N ++
Sbjct: 42 RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP---CK-NSISWNG 97
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+++A G + R+ + S + N +M Y K L A +F+ + E
Sbjct: 98 MLAAYVQNGRIEDARR----LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRM--PE 151
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
R+ SWN +I+GY +G +A F EE D T+T+++S G++DE R+
Sbjct: 152 RDEVSWNTMISGYAQNGELLEAQRLF----EESPVRDVFTWTAMVSGYVQNGMLDEARRV 207
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGC--LYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F M PE + + G C + +A ++ + MP N S W ++ +
Sbjct: 208 FDGM------PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPC-QNVSSWNTMITGYAQN 260
Query: 496 GEIAA--NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG-----------L 542
G+IA N+ ++ + + + YA S E L +MK G L
Sbjct: 261 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 320
Query: 543 KKPAAFSVIEYGKDIQG 559
A + +E GK + G
Sbjct: 321 STCAEIAALELGKQVHG 337
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/671 (34%), Positives = 380/671 (56%), Gaps = 13/671 (1%)
Query: 18 SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFL 77
S + +A IHS +SGL + ++ L ++ Y+T G+ + A SLF ++ S
Sbjct: 258 SSDLVALGSGIHSLCVSSGL-HCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVIS-- 314
Query: 78 WNTMIRAYANNGHCVETLE-LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WNTMI +Y + CVE LE L ++ NS TF L AC+S ++ G+ +H I
Sbjct: 315 WNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMI 374
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++ + + +L+ MY+KC +D +VF+ M D+VS V+ Y E A+
Sbjct: 375 LQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAM 434
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAM 255
+F + G+ + +T++++ LGD+ +H Y L D I NS++ M
Sbjct: 435 RVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITM 494
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
YA CG++E + +F + + +ISWN+++ +++G+ EA+ LF + Q++ K +
Sbjct: 495 YATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCL 554
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+S+ L S + G + HG + + + D+ + NA MDMY KCG +D D P
Sbjct: 555 AECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPD--P 612
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+ R WN LI+GY +G+ ++A + F M+ G KPD++TF ++LSACSHAGLID+G
Sbjct: 613 AHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGM 672
Query: 436 KCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ M V P +KH C+VD+LGR G EA I +MP+ PND +W +LL + R
Sbjct: 673 DYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRT 732
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H G AA L +L+P +VL+SN+YA + +W +V KLR MK L K A S
Sbjct: 733 HKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACS 792
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
++ ++ F DR + + +++Y K++ + ++++ GY+ D S ALHD ++E +EH L
Sbjct: 793 WLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNL 852
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+A+G++ + + +++ KNLRVC DCH F+ +S ++ R+I++RD RFH F
Sbjct: 853 WNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQF 912
Query: 670 EGGTCSCNDYW 680
+ G+CSC+D+W
Sbjct: 913 KHGSCSCSDFW 923
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 198/405 (48%), Gaps = 8/405 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL---ILEGKVVHG 134
W T + A G L MR + + + ++ AC G +H
Sbjct: 9 WYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHA 68
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
R G + + Y+ AL+ +Y G + ++F EM R++VSWT ++ A EE
Sbjct: 69 LTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEE 128
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL+ +++ ++EG++ ++ + +V S G L D + V + + + L + + NS++
Sbjct: 129 ALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLIT 188
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
M+ V+ A +FD ME+RD ISWN+M++ Y S+ ++ +M++ + KP+ T
Sbjct: 189 MFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTT 248
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
LVS C LG H ++S + L NA+++MY+ G LD AE++F ++
Sbjct: 249 LCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNM- 307
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE--EGVKPDHITFTSILSACSHAGLID 432
S R+V SWN +I+ Y +ALE Q+L+ EG P+ +TF+S L ACS +
Sbjct: 308 -SRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG-PPNSMTFSSALGACSSPEALM 365
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
GR A + + S++ + ++ M + + + + + MP
Sbjct: 366 NGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP 410
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/683 (36%), Positives = 394/683 (57%), Gaps = 41/683 (6%)
Query: 16 LKSCNFLASLRQIHS-SLTTSGLINQALHLGAKIIIKYTTYGEPNT-----ARSLFNSIH 69
L++C Q+H+ S+ T+ L + ++ ++++ Y +P A SLF+ I
Sbjct: 22 LQNCGTEREANQLHALSIKTASLNHPSV--SSRLL---ALYADPRINNLQYAHSLFDWIQ 76
Query: 70 NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
S WN +I+ Y N + + L+ + +S+T P VLK CA + EG
Sbjct: 77 EPTLVS--WNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQEG 133
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
K +HG +++ GF D +V ++LV MY+KCG+ + KVFD M +D+VSW +I Y +
Sbjct: 134 KQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARC 193
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+ E AL +F++ ++ DS + + + + G + A+ V + + I+
Sbjct: 194 GEIELALEMFEEMPEK----DSFSWTILIDGLSKSGKLEAARDV---------FDRMPIR 240
Query: 250 NSI-----VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
NS+ + Y + G+ A+ +FD M +R L++WNSM+TGY +N Q ++AL LF+ M
Sbjct: 241 NSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVML 300
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
D PN T L VSA + + S GR H YI+ S K D L +++MY+KCG +
Sbjct: 301 REDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVK 360
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
+A +F I ++ + W +I G GMHG + LE F +M G+KP ITF +L+A
Sbjct: 361 SALRVFRSI--PKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNA 418
Query: 425 CSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CSHAG ++ + F MT +KP ++HY C++D+L RAG L EA D I++MP+ N
Sbjct: 419 CSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKV 478
Query: 484 VWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
+W +LL R HG I AA +L L P+ TG +V++SN+YAA+ W +V ++RE MK
Sbjct: 479 IWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMK 538
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
KG+KK S IE+ I F D+ +P +E+Y K+ M ++ +AG++PD + L
Sbjct: 539 KKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLL 598
Query: 599 DVE-DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
+E D ++E L HSE+LA+AFG++N+ + +++ KNLR+CNDCH+ + +S+IY R+
Sbjct: 599 CLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNRE 658
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
II+RD +RFHHF+ G+CSC D+W
Sbjct: 659 IIIRDGSRFHHFKSGSCSCKDFW 681
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 208/427 (48%), Gaps = 19/427 (4%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK C L +L +QIH + G L + ++ Y+ GE R +F+ + +
Sbjct: 120 VLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSS-LVSMYSKCGEIELCRKVFDRMEDK 178
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN++I YA G LE++ M +S+++ ++ + + + +
Sbjct: 179 DVVS--WNSLIDGYARCGEIELALEMFEEMPEK----DSFSWTILIDGLSKSGKLEAAR- 231
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
D+ + +S A+++ Y K G ++ ++FD+M R LV+W MIT YE+ ++
Sbjct: 232 ---DVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQ 288
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+AL LF+ +E + + TI+ SA + + + VH Y + + F D +
Sbjct: 289 FTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTL 348
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY++CG+V+ A VF + K+ L W S++ G +G + L LFDEM + KP+
Sbjct: 349 LIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPH 408
Query: 312 PVTALILVSACTYLG-SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+T + +++AC++ G + R F + +K ++D+ + G L+ A++
Sbjct: 409 AITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTI 468
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC-SHAG 429
+ P + N W L++G HG+ R E+ +Q L + + PD ILS + AG
Sbjct: 469 ERM-PIKANKVIWTSLLSGSRKHGNIRMG-EYAAQHLID-LAPDTTGCYVILSNMYAAAG 525
Query: 430 LIDEGRK 436
L ++ R+
Sbjct: 526 LWEKVRQ 532
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/574 (38%), Positives = 345/574 (60%), Gaps = 12/574 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L C S I EG+ VH +I+T +L Y++ L+ +Y KC D +FDEM R+
Sbjct: 68 ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRN 127
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV-ASAVGQLGDVLKAQAVH 234
+VSWT MI+AY Q EAL LF + + + T ++ S G LG + +H
Sbjct: 128 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG-FETGRQIH 186
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
AI + + + +S++ MYA+ G + A VF + +RD+++ ++++GY Q G
Sbjct: 187 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 246
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EAL LF ++Q N VT +++A + L + G++ H +++ S L N+++
Sbjct: 247 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 306
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKP 413
DMY+KCG++ A +F+ + ER SWN ++ GY HG R+ LE F M EE VKP
Sbjct: 307 DMYSKCGNVCYARRIFDSM--PERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKP 364
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
D IT+ ++LS CSH L D G + F +M K ++P++ HY C+VD+LGRAG + EAFD
Sbjct: 365 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFD 424
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
IK+MP P ++WG+LL +CR+H G I L +LEPE+ G +V++SN+YA++ K
Sbjct: 425 FIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGK 484
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W ++ +R+ M+ K + K S +E + + FH +D +P +EV KV+ ++++ K
Sbjct: 485 WEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFKE 544
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY+PDLSC L+DV++E +E +L HSEKLA+AFG++ ++V KNLR+C DCHS
Sbjct: 545 DGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHSF 604
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+F+S +Y R +I+RD NRFH+ GG CSC DYW
Sbjct: 605 AKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 215/418 (51%), Gaps = 12/418 (2%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD +L C ++R+ +H+ + + + +++L ++I+ Y AR +F+ +
Sbjct: 65 YDSILNECVSQRAIREGQRVHTHMIKTCYL-PSVYLRTRLIVLYNKCDCLGDARGMFDEM 123
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W MI AY+ G E L L+ M RS N +TF +L +C +
Sbjct: 124 PQRNVVS--WTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFET 181
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H I+ + S +V ++L+DMYAK G+ D VF + RD+V+ T +I+ Y Q
Sbjct: 182 GRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQ 241
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL LF++ Q EG+ S+SVT SV +A+ L + + VH + + + + +
Sbjct: 242 MGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVL 301
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
NS++ MY++CGNV AR +FD M +R ISWN+ML GY ++G A E L LF M+ +
Sbjct: 302 LNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENK 361
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDT 365
KP+ +T L ++S C++ +G + ++N I+ + + V+D+ + G ++
Sbjct: 362 VKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEE 421
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A + + P + W L+ +H + ++LE ++P++ ILS
Sbjct: 422 AFDFIKKM-PFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE--LEPENAGNYVILS 476
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/569 (36%), Positives = 345/569 (60%), Gaps = 7/569 (1%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ ACA + + + + VH + + F D+++ +L+ +Y KCG + KVFDEM +D+
Sbjct: 58 ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDM 117
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT +I Y Q + PEEA+ L + + T S+ A G D + +H
Sbjct: 118 VSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHAL 177
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
A+ + ED+ + ++++ MYARCG ++ A VFD ++ ++ +SWN++++G+ + G A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L+ F EM + + T + S+ LG+ + G+ H ++I S K+ A N ++DM
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDM 297
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAK G + A +F+ + ++++ +WN ++ + +G G++A+ F +M + G+ + +
Sbjct: 298 YAKSGSMIDARKVFDRV--DDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQV 355
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
TF IL+ACSH GL+ EG++ F M + ++PE+ H+ +V +LGRAG L A I +M
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKM 415
Query: 477 PLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
P+ P +VWGALL ACR+H G+ AA+++F+L+P+ +G VL+ NIYA++ +W
Sbjct: 416 PIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAA 475
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
++R MK G+KK A S +E + F D +P +E+YK ++ +I+ GY+P
Sbjct: 476 RVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVP 535
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
D+ L V+D++RE L YHSEKLA+AF ++ + A +++ KN+R+C DCHSAF++IS
Sbjct: 536 DMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYIS 595
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ R+I+VRD NRFHHF G+CSC DYW
Sbjct: 596 KVFGREIVVRDTNRFHHFSNGSCSCADYW 624
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 199/397 (50%), Gaps = 8/397 (2%)
Query: 4 LGPSTEGFYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
L P T Y + +C L R++H+ L +S A L +I Y G
Sbjct: 47 LAP-TPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAF-LDNSLIHLYCKCGSVLE 104
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR +F+ + S W ++I YA N E + L M + N +TF +LKA
Sbjct: 105 ARKVFDEMRRKDMVS--WTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAA 162
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+++ G+ +H ++ + D YV +AL+DMYA+CG D VFD++ ++ VSW
Sbjct: 163 GAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWN 222
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I+ + + E AL+ F + + G + T SV S++ +LG + + + VH + I +
Sbjct: 223 ALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKS 282
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
N+++ MYA+ G++ AR VFD ++ +DL++WN+MLT + Q G EA+ F
Sbjct: 283 RQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHF 342
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+EM+ S N VT L +++AC++ G + G+++ + +++ + V+ + +
Sbjct: 343 EEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRA 402
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
G L+ A +F P E + W L+A MH + +
Sbjct: 403 GLLNFAL-VFIFKMPIEPTAAVWGALLAACRMHKNAK 438
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 10/235 (4%)
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
AS L D + + P P ++AC + + RK H ++ +S DA L N+
Sbjct: 32 ASAVLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNS 91
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++ +Y KCG + A +F+++ +++ SW LIAGY + +A+ ML+ K
Sbjct: 92 LIHLYCKCGSVLEARKVFDEMR--RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFK 149
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
P+ TF S+L A GR+ A K +V + ++DM R G + A +
Sbjct: 150 PNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAV 209
Query: 473 IKQMPLPPNDSVWGALL--LACRIHGEIAANYLFQL-----EPEHTGYFVLMSNI 520
++ N W AL+ A + GE A ++ E H Y + S+I
Sbjct: 210 FDKLD-SKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSI 263
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/663 (34%), Positives = 370/663 (55%), Gaps = 14/663 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ L G + L + Y+ GE + LF+ + S W ++I +
Sbjct: 95 KQLHAMLIRGGCLPNTF-LSNHFLNLYSKCGELDYTIKLFDKMSQRNMVS--WTSIITGF 151
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A+N E L + MR G + + VL+AC S I G VH +++ GF +
Sbjct: 152 AHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCEL 211
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V + L DMY+KCG+ D CK F+EM +D V WT MI + + ++AL + K +
Sbjct: 212 FVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTD 271
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ D + S SA L +++H + F + I N++ MY++ G++ A
Sbjct: 272 DVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSA 331
Query: 266 RLVFDMMEK-RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
VF + ++S +++ GY++ Q +AL F +++ +PN T L+ AC
Sbjct: 332 SNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACAN 391
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI-HPSERNVSSW 383
+ G + HG ++ N K D + + ++DMY KCG D + +F++I +P E +W
Sbjct: 392 QAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDE---IAW 448
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N L+ + HG GR A+E F+ M+ G+KP+ +TF ++L CSHAG++++G F+ M K
Sbjct: 449 NTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEK 508
Query: 444 L-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI---- 498
+ V P+ +HY+C++D+LGRAG L EA D I MP PN W + L AC+IHG++
Sbjct: 509 IYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAK 568
Query: 499 -AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA+ L +LEPE++G VL+SNIYA +W +V LR+ +K+ + K +S ++
Sbjct: 569 FAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKT 628
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D +P KE+Y+K++++ +IK GY+P L D++D +E +L+YHSE++A
Sbjct: 629 HVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIA 688
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VAF ++ + V KNLRVC+DCHSA +FIS + R IIVRD +RFHHF G+CSC
Sbjct: 689 VAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCG 748
Query: 678 DYW 680
DYW
Sbjct: 749 DYW 751
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 201/389 (51%), Gaps = 2/389 (0%)
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
S++ T +++ A + +GK +H +IR G L ++++ +++Y+KCG+ D K+
Sbjct: 73 SDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKL 132
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
FD+MS R++VSWT +IT + + +EAL F + + EG ++ + SV A LG +
Sbjct: 133 FDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAI 192
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
VH + F +L + +++ MY++CG + A F+ M +D + W SM+ G+
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
++NG +AL + +M D + +SAC+ L + G+ H I+ + +
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYET 312
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ NA+ DMY+K GD+ +A N+F IH ++ S +I GY KAL F +
Sbjct: 313 FIGNALTDMYSKSGDMVSASNVFQ-IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLR 371
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
G++P+ TFTS++ AC++ ++ G + + K + K + + +VDM G+ G
Sbjct: 372 RRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFD 431
Query: 468 EAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+ + ++ P++ W L+ HG
Sbjct: 432 HSIQLFDEIE-NPDEIAWNTLVGVFSQHG 459
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/680 (35%), Positives = 387/680 (56%), Gaps = 24/680 (3%)
Query: 10 GFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYT--TYGEPNTARSLFNS 67
GF DQ + C + Q+H+ + + N + ++++ Y+ + ARS+F+
Sbjct: 15 GFADQRMGLCA-PQEVEQLHAFSLKTAIFNHPF-VSSRLLALYSDPKINDLGYARSIFDR 72
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I + WNT+I+ Y N + + L+ + + N +T P V+K CA ++
Sbjct: 73 IQ--RRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLPDN-FTLPCVIKGCARLGVVQ 129
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
EGK +HG ++ GF SD +VQ +LV+MY+KCG+ D KVFD M +D+V W +I Y
Sbjct: 130 EGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYA 189
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ + + AL LF++ + D+ + + + + G V A+ + C +L
Sbjct: 190 RCGEIDIALQLFEEMPER----DAFSWTVLVDGLSKCGKVESARKLFDQMPC----RNLV 241
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
N+++ Y + G+ + A +F M DL++WN M+ GY NGQ +A+ +F M
Sbjct: 242 SWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLG 301
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+P+ T + ++SA + L GR H Y+ + ++D L ++++MYAKCG +++A
Sbjct: 302 SRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESAL 361
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F I ++ V W +I G G+HG AL F +M + G+KP+ I F +L+AC+H
Sbjct: 362 TVFRAIQ--KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNH 419
Query: 428 AGLIDEGRKCF-ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL+D+GR+ F M + ++P ++HY C+VD+L RAG L EA + I+ MP+ PN +W
Sbjct: 420 AGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWM 479
Query: 487 ALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
+LL R HG+I AA + ++ PE G ++L+SN+YAAS W +V +RE M +G
Sbjct: 480 SLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRG 539
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+K S +E+ + F D +P KE+Y K+ M ++K G++PD + L +E
Sbjct: 540 FRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIE 599
Query: 602 DE-DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E ++E L HSE+LA+AFG++N+ P +++ KNLRVCNDCHS + +S IY R+IIV
Sbjct: 600 GEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIV 659
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD RFHHF+ G+CSC DYW
Sbjct: 660 RDNCRFHHFKNGSCSCMDYW 679
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/704 (33%), Positives = 371/704 (52%), Gaps = 74/704 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
I+ + G ++AR +F+ I S S W TMI Y + G + + M SGIS
Sbjct: 85 ILSAHAKAGNLDSARRVFDEIPQPDSVS--WTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+TF VL +CA+ + GK VH +++ G V +L++MYAKCG + V
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS------------------ 209
FD M ++D +W MI+ + Q + + AL LF + ++S
Sbjct: 203 FDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRAL 262
Query: 210 --------------DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
D T+ SV SA + + +H + + + N++++M
Sbjct: 263 ETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISM 322
Query: 256 YARCGNVE---------------------------------KARLVFDMMEKRDLISWNS 282
YA+ G VE AR +FD ++ RD+++W +
Sbjct: 323 YAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTA 382
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ GY QNG S+AL+LF M KPN T ++S + L S G++ H I
Sbjct: 383 MIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLE 442
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
++ NA++ MY++ G + A +FN I S R+ +W +I HG G +A+E
Sbjct: 443 EVSSVSVGNALITMYSRSGSIKDARKIFNHI-CSYRDTLTWTSMILSLAQHGLGNEAIEL 501
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLG 461
F +ML +KPDHIT+ +LSAC+H GL+++G+ F M + +++P HYACM+D+LG
Sbjct: 502 FEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLG 561
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA++ I+ MP+ P+ WG+LL +CR+H ++AA L ++P ++G ++
Sbjct: 562 RAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLA 621
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
++N +A KW + K+R+ MK+K +KK FS ++ + F D ++P +Y
Sbjct: 622 LANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCM 681
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
+ + EIK G++PD + LHD+E E +E +L +HSEKLA+AF ++N V++ KN
Sbjct: 682 ISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKN 741
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LRVCNDCHSA R+IS + R+IIVRDA RFHHF+ G+CSC DYW
Sbjct: 742 LRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 196/449 (43%), Gaps = 74/449 (16%)
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
L ++ ++ +AK G D +VFDE+ D VSWT MI Y + A+ F +
Sbjct: 76 LKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLR 135
Query: 202 TQQEGLLSDSVTIVSVAS--AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
G+ T +V + A Q DV + VH + + + + NS++ MYA+C
Sbjct: 136 MVSSGISPTQFTFTNVLASCAAAQALDV--GKKVHSFVVKLGQSGVVPVANSLLNMYAKC 193
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC----------- 308
G+ A++VFD M +D +WN+M++ ++Q Q AL LFD+M + D
Sbjct: 194 GDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYC 253
Query: 309 ---------------------KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
KP+ T ++SAC S +LG++ H +I+ +++ I
Sbjct: 254 HQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAG 313
Query: 348 TLRNAVMDMYAKCGDLDTAENM-----------------------FNDIHPSE------- 377
+ NA++ MYAK G ++ A + DI P+
Sbjct: 314 AVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLK 373
Query: 378 -RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
R+V +W +I GY +G AL F M+ EG KP++ T ++LS S +D G++
Sbjct: 374 HRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQ 433
Query: 437 CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
A +L V ++ M R+G + +A + + + W +++L+ HG
Sbjct: 434 LHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHG 493
Query: 497 ------EIAANYL-FQLEPEHTGYFVLMS 518
E+ L L+P+H Y ++S
Sbjct: 494 LGNEAIELFEKMLRINLKPDHITYVGVLS 522
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/718 (34%), Positives = 380/718 (52%), Gaps = 90/718 (12%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y+ G+ +R +F+ S +N MI AY++N +EL+ M+R
Sbjct: 85 LIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFR 144
Query: 108 SNSYTFPFVLKACASNSLILEG----KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD- 162
++YTF VL A A L+ E + +H ++++G + V AL+ Y KC +
Sbjct: 145 PDNYTFTSVLGALA---LVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPS 201
Query: 163 --------DGCKVFDEMSVRDLVSWTVMITAYEQAEKPE--------------------- 193
+ K+FDEM RD +SWT +IT Y + +
Sbjct: 202 AQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMI 261
Query: 194 ----------EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY---AICN 240
EA +F+K + D T SV S G + +H Y + N
Sbjct: 262 SGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVAN 321
Query: 241 AFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI----------- 288
+ + + N+++ Y +CG V+ A+ +F+ M +RDL+SWN +L+GY+
Sbjct: 322 PAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSF 381
Query: 289 --------------------QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
Q G A EAL F+ M+ +P + +C+ LGS
Sbjct: 382 FNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSL 441
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ GR+ H ++ + + NA++ MYA+CG +D A +F I+ + SWN +IA
Sbjct: 442 KHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLF--INMPCVDAISWNAMIA 499
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVK 447
G HG G +A+E F +ML+EG+ PD I+F +++SACSHAGL+ EGRK F M + V
Sbjct: 500 ALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVN 559
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANY 502
P+ +HYA ++D+L RAG EA ++++ MP P +W ALL CRIHG I AA
Sbjct: 560 PDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAER 619
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
LF+L+P+H G +VL+SN+YA + +W ++ K+R+ M+++G+KK S IE + F
Sbjct: 620 LFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLV 679
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
D +P +++Y +E + +E++ GY+PD C LHDVE + +EH L+ HSEKLAVA+G
Sbjct: 680 GDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGF 739
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
M L A V+V KNLR+C DCH+AF+F+S + R+I+VRD RFHHF G CSC DYW
Sbjct: 740 MKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 191/478 (39%), Gaps = 112/478 (23%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE------------------ 170
+ VH +I +GF ++ L+D+Y+K + + +FDE
Sbjct: 32 ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSA 91
Query: 171 ---------------MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
+ +RD V + MITAY A+ LF Q++ D+ T
Sbjct: 92 AGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFT 151
Query: 216 SVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGN---------VEKA 265
SV A+ + + K Q +H + + + N++++ Y +C + +A
Sbjct: 152 SVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEA 211
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQN-------------------------------GQAS 294
R +FD M RD +SW +++TGY++N G
Sbjct: 212 RKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYL 271
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII----NSNMKIDATLR 350
EA +F +M S + + T ++S C G +LG++ H Y + N + +
Sbjct: 272 EAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVN 331
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY-------------------- 390
NA++ Y KCG +D A+ +FN + ER++ SWN++++GY
Sbjct: 332 NALITFYWKCGKVDIAQEIFNKM--PERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKN 389
Query: 391 -----------GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
G +AL+FF++M +G +P F + +CS G + GR+ A
Sbjct: 390 ILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHA 449
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ + + + ++ M R G + A + MP S W A++ A HG+
Sbjct: 450 QVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAIS-WNAMIAALGQHGQ 506
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/720 (35%), Positives = 380/720 (52%), Gaps = 94/720 (13%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA--NNGHCVETLELYSTMRRSG 105
+I Y+ G AR +FN D + +N MI Y+ N+GH +EL+ MR +
Sbjct: 85 LITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGH--SAIELFRAMRWAN 142
Query: 106 ISSNSYTFPFVLKACASNSLIL----EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
+ +TF VL A ++LI + +HG +++ G V AL+ +Y KC +
Sbjct: 143 FQPDDFTFASVLSA---STLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASS 199
Query: 162 D---------DGCKVFDEMSVRDLVSWTVMITAYEQ--------------AEKP------ 192
K+FDEM R+ WT +IT Y + E+P
Sbjct: 200 PLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNA 259
Query: 193 -----------EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
E+AL LF+K + G+ D T SV SA G L + VH Y + N
Sbjct: 260 MISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNE 319
Query: 242 FLED----LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI--------- 288
D L + N+++ +Y + G V+ AR +F M +D+I+WN++L+GY+
Sbjct: 320 LNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAK 379
Query: 289 ----------------------QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
QNG +AL LF++M+ +PN ++AC+ LG
Sbjct: 380 SFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLG 439
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ + GR+ H I++ ++ NA++ MYA+CG ++ A MF + P VS WN +
Sbjct: 440 ALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTM-PFVDPVS-WNSM 497
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LS 445
IA G HGHG KA+E + QML+EG+ PD TF ++LSACSHAGL++EG + F M +
Sbjct: 498 IAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYG 557
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AA 500
+ P HYA M+D+ RAG +A ++I MP +W ALL CR HG + AA
Sbjct: 558 IAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAA 617
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
LF+L P+H G +VL+SN+YA+ +W +V + R+ M+++G+KK A S E + F
Sbjct: 618 EKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVF 677
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D V+P +Y +E + +E+K GY+PD LHD+E E +E+ L+ HSEKLAVAF
Sbjct: 678 LVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAF 737
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
G+M L A V+V KNLR+C DCH+A +F+S + R+I+VRD RFHHF+ G CSC +YW
Sbjct: 738 GLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 191/475 (40%), Gaps = 108/475 (22%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE------------------ 170
+ VHG +I +GF ++ L+D+Y K K+FDE
Sbjct: 32 ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91
Query: 171 ---------------MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
+ +RD V + MIT Y A+ LF+ + D T
Sbjct: 92 LGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFA 151
Query: 216 SVASA----------VGQL-GDVLKAQAVHGYAICNAFL--------------------- 243
SV SA GQ+ G V+K A+ NA L
Sbjct: 152 SVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASA 211
Query: 244 ---------EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
+ I +++ Y R G++ AR + D M ++ I+WN+M++GY+ +G
Sbjct: 212 RKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFE 271
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA----TLR 350
+AL LF +M+ + + T ++SAC G LG++ H YI+ + + D ++
Sbjct: 272 DALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVG 331
Query: 351 NAVMDMYAKCGDLDTAENMFNDI-----------------------------HPSERNVS 381
N ++ +Y K G +D A +F ++ E+N+
Sbjct: 332 NTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLL 391
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
+W V+I+G +G G +AL+ F+QM +G +P+ F ++ACS G ++ GR+ A +
Sbjct: 392 TWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQI 451
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
L + M+ M R G + A M MP S W +++ A HG
Sbjct: 452 VHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVS-WNSMIAALGQHG 505
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 142/330 (43%), Gaps = 50/330 (15%)
Query: 1 MRRLGPST-EGFYDQLLKSC---NFLASLRQIHSSLTTSGL---INQALHLGAKIIIKYT 53
MR LG E Y ++ +C F +Q+H+ + + L + L +G +I Y
Sbjct: 280 MRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYW 339
Query: 54 TYGEPNTARSLF-------------------NSIHNDKSYSFL----------WNTMIRA 84
YG+ + AR +F N+ +++ SF W MI
Sbjct: 340 KYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISG 399
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
A NG + L+L++ M+ G N Y F + AC+ + G+ +H I+ G S
Sbjct: 400 LAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDST 459
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
V A++ MYA+CG + +F M D VSW MI A Q +A+ L+++ +
Sbjct: 460 LSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLK 519
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS------IVAMYAR 258
EG+L D T ++V SA G V + G N+ LE+ I ++ ++ R
Sbjct: 520 EGILPDRRTFLTVLSACSHAGLVEE-----GNRYFNSMLENYGIAPGEDHYARMIDLFCR 574
Query: 259 CGNVEKARLVFDMM--EKRDLISWNSMLTG 286
G A+ V D M E R I W ++L G
Sbjct: 575 AGKFSDAKNVIDSMPFEARAPI-WEALLAG 603
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 31/133 (23%)
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC------------------------ 360
L S L R HG++I S K+ + N ++D+Y K
Sbjct: 26 LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTL 85
Query: 361 -------GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
G+L A +FN+ R+ +N +I GY G A+E F M +P
Sbjct: 86 ITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQP 145
Query: 414 DHITFTSILSACS 426
D TF S+LSA +
Sbjct: 146 DDFTFASVLSAST 158
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/672 (37%), Positives = 372/672 (55%), Gaps = 16/672 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L+SC + L R++H+ + GL + L A ++ Y G+ AR +F+ +
Sbjct: 201 VLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNA-LVTMYAKCGDVEAARKVFDGMSLT 259
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI + N C LEL+ M + N T V A S + K
Sbjct: 260 DCIS--WNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKE 317
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++ GF +D +L+ MY+ G+ + C VF M RD +SWT MI+ YE+
Sbjct: 318 IHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGF 377
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P++AL ++ + + D VT+ S +A LG + +H A F+ + + N+
Sbjct: 378 PDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANA 437
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MYA+ +EKA VF M +D+ISW+SM+ G+ N + EAL F M +D KPN
Sbjct: 438 LVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML-ADVKPN 496
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++AC GS + G++ H +++ + + + NA++D+Y KCG A F
Sbjct: 497 SVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFG 556
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++V SWN+++AG+ HGHG AL FF++MLE G PD +TF ++L CS AG++
Sbjct: 557 A--HGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMV 614
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+G + F MT K S+ P +KHYACMVD+L R G L E ++ I +MP+ P+ +VWGALL
Sbjct: 615 SQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLN 674
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
CRIH GE+AA + +LEP GY VL+S++YA + W EV K+R+ M+ KGL+
Sbjct: 675 GCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHD 734
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S +E I F T D +P KE+ ++ + +K +G+ P S +L D E +
Sbjct: 735 YGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLEDKE-VSK 793
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ +L HSE+LAVAFG++N TP + VTKN C CH R IS I RR+I VRD
Sbjct: 794 DDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITVRDTKE 853
Query: 666 FHHFEGGTCSCN 677
FHHF G+CSC
Sbjct: 854 FHHFRDGSCSCG 865
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 232/464 (50%), Gaps = 13/464 (2%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQA-----LHLGAKIIIKYTTYGEPNT 60
P E Y L C + R L G + A L LG ++ +GE
Sbjct: 91 PPDEDAYVALFHLCEWR---RAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWH 147
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +F + +S WN M+ Y G E L+LY M +G + YTFP VL++C
Sbjct: 148 AWKVFAKMPERDVFS--WNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSC 205
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ G+ VH ++R G + V ALV MYAKCG + KVFD MS+ D +SW
Sbjct: 206 GGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWN 265
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI + + + E L LF ++ + + +TI SV A G L D+ A+ +H A+
Sbjct: 266 AMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKR 325
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F D+ NS++ MY+ G + +A VF ME RD +SW +M++GY +NG +AL ++
Sbjct: 326 GFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVY 385
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
M+ ++ P+ VT ++AC LG +G K H + + NA+++MYAK
Sbjct: 386 ALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKS 445
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
++ A +F + +++V SW+ +IAG+ + +AL +F ML + VKP+ +TF +
Sbjct: 446 KIIEKAIEVFK--YMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNSVTFIA 502
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
L+AC+ G + G++ A + + + E ++D+ + G
Sbjct: 503 ALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCG 546
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 11/240 (4%)
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
+G+ +AL L +++S P+ + L C + + + G + G+ ++ L
Sbjct: 75 HGELQQALWL---LESSPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRL 131
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
NA++ M + G+ A +F + ER+V SWNV++ GYG G +AL+ + +ML
Sbjct: 132 GNAMLSMLVRFGETWHAWKVFAKM--PERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWA 189
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
G +PD TF +L +C + GR+ A + + + EV +V M + G + A
Sbjct: 190 GARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAA 249
Query: 470 FDMIKQMPLPPNDSV-WGALLLACRIHGEIAAN---YLFQLEPEHTGYFVLMSNIYAASN 525
+ M L D + W A++ + E A +L LE E + ++++ AS
Sbjct: 250 RKVFDGMSL--TDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASG 307
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/570 (37%), Positives = 347/570 (60%), Gaps = 7/570 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L C + +G+ +H I + F D + +++MYAKCG ++ +FD+M +D
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWTV+I+ Y Q+ + EAL LF K G + T+ S+ A G + +H
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+++ + ++ + +S++ MYAR ++ +A+++F+ + ++++SWN+++ G+ + G+
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
+ LF +M +P T + +AC GS + G+ H ++I S + A + N ++D
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAK G + A+ +F + ++++ SWN +I+GY HG G +AL+ F QML+ V+P+
Sbjct: 351 MYAKSGSIKDAKKVFRRL--VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 408
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
ITF S+L+ACSH+GL+DEG+ F M K ++ +V H+ +VD+LGRAG L EA I++
Sbjct: 409 ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 468
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ P +VWGALL +CR+H G AA +F+L+P +G VL+SNIYA++ + +
Sbjct: 469 MPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDA 528
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
K+R+ MK G+KK A S +E ++ F D +P +E+ + E ++ +IK GY+
Sbjct: 529 AKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYV 588
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
PD S L + +DRE L YHSEKLA+AF ++ P +++ KN+R+C DCHSAF+F
Sbjct: 589 PDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFA 648
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S + R+IIVRD NRFHHF G CSC DYW
Sbjct: 649 SRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 219/445 (49%), Gaps = 14/445 (3%)
Query: 11 FYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
Y ++L C +L L+Q IH+ + +S + + L I+ Y G A+ LF+
Sbjct: 107 LYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNF-ILNMYAKCGSLEEAQDLFDK 165
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ S W +I Y+ +G E L L+ M G N +T +LKA +
Sbjct: 166 MPTKDMVS--WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDH 223
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +H ++ G+ + +V ++L+DMYA+ + +F+ ++ +++VSW +I +
Sbjct: 224 HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHA 283
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ + E + LF + ++G T SV +A G + + + VH + I +
Sbjct: 284 RKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAY 343
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
I N+++ MYA+ G+++ A+ VF + K+D++SWNS+++GY Q+G +EAL LF++M +
Sbjct: 344 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 403
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+PN +T L +++AC++ G G+ + + ++ V+D+ + G L+ A
Sbjct: 404 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA- 462
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFTSILSA 424
N F + P + + W L+ MH + G A E ++ P H+ ++I ++
Sbjct: 463 NKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGP-HVLLSNIYAS 521
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPE 449
AG + + K M + VK E
Sbjct: 522 ---AGRLSDAAKVRKMMKESGVKKE 543
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L + D + +P +++ CTYL + GR H +I +S + D L N +++M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAKCG L+ A+++F+ + P+ +++ SW VLI+GY G +AL F +ML G +P+
Sbjct: 150 YAKCGSLEEAQDLFDKM-PT-KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEF 207
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
T +S+L A GR+ A K V + ++DM R + EA + +
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 477 PLPPNDSVWGALLL--ACRIHGEIAANYLFQL-----EPEHTGY 513
N W AL+ A + GE Q+ EP H Y
Sbjct: 268 A-AKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTY 310
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/637 (35%), Positives = 363/637 (56%), Gaps = 12/637 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ P +AR + S W ++I A NGH L + MRR G+ N +
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVS--WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDF 59
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TFP KA AS L + GK +H ++ G + D +V + DMY K DD K+FDE+
Sbjct: 60 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
R+L +W I+ +P EA+ F + ++ +S+T + +A +
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+HG + + F D+ + N ++ Y +C + + ++F M ++ +SW S++ Y+QN
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+ +A +L+ + + + ++SAC + +LGR H + + + ++ + +
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
A++DMY KCG ++ +E F+++ E+N+ + N LI GY G AL F +M G
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEM--PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 357
Query: 412 --KPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYE 468
P+++TF S+LSACS AG ++ G K F M + ++P +HY+C+VDMLGRAG +
Sbjct: 358 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 417
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAA 523
A++ IK+MP+ P SVWGAL ACR+HG+ +AA LF+L+P+ +G VL+SN +AA
Sbjct: 418 AYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAA 477
Query: 524 SNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE 583
+ +W E +RE++K G+KK A +S I + F DR + KE+ + + E
Sbjct: 478 AGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNE 537
Query: 584 IKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
++ AGY PDL +L+D+E+E++ +++HSEKLA+AFG+++L +++TKNLR+C DC
Sbjct: 538 MEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDC 597
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
HS F+F+S +R+IIVRD NRFH F+ G CSC DYW
Sbjct: 598 HSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 159/324 (49%), Gaps = 2/324 (0%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY+K + V R++VSWT +I+ Q AL+ F + ++EG++ + T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
AV L + + +H A+ + D+ + S MY + + AR +FD +
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
+R+L +WN+ ++ + +G+ EA+ F E + D PN +T ++AC+ LG +
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
HG ++ S D ++ N ++D Y KC + ++E +F ++ +N SW L+A Y +
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM--GTKNAVSWCSLVAAYVQN 238
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY 453
KA + + ++ V+ +S+LSAC+ ++ GR A K V+ +
Sbjct: 239 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 298
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMP 477
+ +VDM G+ GC+ ++ +MP
Sbjct: 299 SALVDMYGKCGCIEDSEQAFDEMP 322
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/671 (36%), Positives = 368/671 (54%), Gaps = 18/671 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
R+ H+ +GL++ ++ Y G A+ LF + WNTM+
Sbjct: 186 REAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSV 245
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS- 143
+G E ++ M G+ + TF L AC+ L+ G+ +H +I+ L+
Sbjct: 246 LVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAA 305
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+S+V +ALVDMYA Q +VFD + S + L W MI Y QA EEAL LF +
Sbjct: 306 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 365
Query: 202 TQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ E G + T+ SV A + +AVHGY + + +QN+++ MYAR G
Sbjct: 366 MEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLG 425
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN---SDCKPNPVTALI 317
+ AR +F M++ D++SWN+++TG + G ++A L EMQ PN +T +
Sbjct: 426 KTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMT 485
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L+ C L + G++ HGY + + D + +A++DMYAKCG L + +F+ +
Sbjct: 486 LLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL--PR 543
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRK 436
RN +WNVLI YGMHG G +A F +M G +P+ +TF + L+ACSH+G++D G +
Sbjct: 544 RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQ 603
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND-SVWGALLLACRI 494
F M + V+P AC+VD+LGRAG L EA+ M+ M S W +L ACR+
Sbjct: 604 LFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRL 663
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H GEIA L +LEPE ++VL+ NIY+A+ +W ++R M+ +G+ K S
Sbjct: 664 HRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCS 723
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE I F + +P +EV+ +E++ E+ GY PD SC LHD++D D+ +L
Sbjct: 724 WIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVL 783
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+AFG++ P A ++V KNLRVCNDCH A +F+S + R+I++RD RFHHF
Sbjct: 784 RCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHF 843
Query: 670 EGGTCSCNDYW 680
G CSC DYW
Sbjct: 844 RNGQCSCGDYW 854
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 186/412 (45%), Gaps = 17/412 (4%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFL--SDSYVQAALVDMYAKCGQTDDGCKVFD 169
P +K+ A+ + +H +R G L V AL+ YA+CG+ +VF
Sbjct: 59 ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118
Query: 170 EM--SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
+ S D VS+ +I+A + + AL + G S T+VSV AV L
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178
Query: 228 LKA----QAVHGYAICNAFL--EDLCIQNSIVAMYARCGNVEKARLVFDMME--KRDLIS 279
A + H +A+ N L N++++MYAR G V A+ +F + D+++
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 238
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN+M++ +Q+G EA+ +M +P+ VT + AC+ L +GR+ H Y+I
Sbjct: 239 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298
Query: 340 NSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ + ++ + +A++DMYA + A +F+ + S + + WN +I GY G +
Sbjct: 299 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 358
Query: 399 ALEFFSQM-LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
AL F++M E G P T S+L AC+ + + K + ++
Sbjct: 359 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALM 418
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPE 509
DM R G A + + LP S W L+ C + G +A FQL E
Sbjct: 419 DMYARLGKTDVARRIFAMVDLPDVVS-WNTLITGCVVQGHVADA--FQLARE 467
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 43/304 (14%)
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQNSIVA 254
I QQ+ L S ++ SA L D A+A+H A+ L + N+++
Sbjct: 46 ITMASPQQQ--LDHSALPPAIKSAAA-LRDARSARAIHAAALRRGLLHRPSPAVANALLT 102
Query: 255 MYARCGNVEKARLVFDMM--EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP-- 310
YARCG + A VF + D +S+NS+++ AL LF ++
Sbjct: 103 AYARCGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRA 152
Query: 311 -----NPVTALILVS---ACTYL----GSRQLGRKFHGYIINSNMKIDATLR---NAVMD 355
+P+T+ LVS A ++L + +LGR+ H + + + + + R NA++
Sbjct: 153 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL-LHGHQRFAFNALLS 211
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYA+ G + A+ +F P +V +WN +++ G +A++ M+ GV+PD
Sbjct: 212 MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 271
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLG---RAGCLYEA 469
+TF S L ACS L+D GR+ A + K L+ V + +VDM + G +
Sbjct: 272 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVA--SALVDMYATHEQVGKARQV 329
Query: 470 FDMI 473
FDM+
Sbjct: 330 FDMV 333
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/604 (37%), Positives = 353/604 (58%), Gaps = 42/604 (6%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
++++C + L+ +GK VH I +GF+ ++ L++MYAKC D K+FDEM RD
Sbjct: 76 LIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERD 135
Query: 176 L-------------------------------VSWTVMITAYEQAEKPEEALILFQKTQQ 204
L SWT MI+ Y + ++P EAL LF+ ++
Sbjct: 136 LCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKR 195
Query: 205 -EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+ S+ T+ S +A + + + +HGY + D + +++ MY +CG++E
Sbjct: 196 SDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIE 255
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+AR +FD M RD+++W +M+ Y Q+G+ E LF ++ S +PN T +++AC
Sbjct: 256 EARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACA 315
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
S +LG+K HGY+ + +A++ MY+KCG++ +AE +F + + ++ SW
Sbjct: 316 NQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKET--PQPDLFSW 373
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT- 442
LIAGY +G +A+ +F +++ G +PDHITF +LSAC+HAGL+D+G F +
Sbjct: 374 TSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKE 433
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI---- 498
+ + HYAC++D+L R+G EA ++I +M + P+ +W +LL CRIHG +
Sbjct: 434 QYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQ 493
Query: 499 -AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA LF++EPE+ +V ++NIYA + W EV K+R+ M ++G+ K S I +D+
Sbjct: 494 RAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDV 553
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D +P KE+ + + ++ +K G++PD + LHDVEDE +E L+YHSEKLA
Sbjct: 554 HVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLA 613
Query: 618 VAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
VAFGI++ TPE ++V KNLR C DCH+A +FIS I RKIIVRD+NRFH FE G CSC
Sbjct: 614 VAFGIIS-TPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSC 672
Query: 677 NDYW 680
DYW
Sbjct: 673 RDYW 676
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/641 (34%), Positives = 362/641 (56%), Gaps = 12/641 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
++ YT G AR +F+ + + WN+MI AY+ + E ++ M+ G
Sbjct: 51 LVNTYTKCGSLTDARKVFDGMPCRSVGT--WNSMISAYSISERSGEAFFIFQRMQHEGER 108
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ TF +L AC + + GK V I T F D +V AL+ MYA+C ++ +V
Sbjct: 109 CDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQV 168
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F M ++L++W+ +ITA+ EAL F+ QQEG+L + VT +S+ + +
Sbjct: 169 FGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 228
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARC--GNVEKARLVFDMMEKRDLISWNSMLT 285
+ +H + + + N++V +Y RC G ++ A ++ M+++ + +WN ++
Sbjct: 229 EELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLIN 288
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY +G++ EAL + +Q + VT + +++ACT S G+ H + +
Sbjct: 289 GYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDS 348
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D ++NA+ +MY+KCG ++ A +F+ + R+ SWN ++ Y HG + L+ +
Sbjct: 349 DVIVKNALTNMYSKCGSMENARRIFDSM--PIRSAVSWNGMLQAYAQHGESEEVLKLIRK 406
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAG 464
M +EGVK + ITF S+LS+CSHAGLI EG + F + ++ + +HY C+VD+LGRAG
Sbjct: 407 MEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAG 466
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA I +MP P W +LL ACR+H G++AA L +L+P ++ V++SN
Sbjct: 467 KLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSN 526
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+ W+ KLR M ++ +KK S I+ + F D +P E+Y KVE
Sbjct: 527 IYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEE 586
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ ++ AGY+PD LHDV++E +E +L YHSEKLA+AFG+++ ++ + + KNLRV
Sbjct: 587 LCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRV 646
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+A +FIS I R+I+VRD +RFHHF G+CSC DYW
Sbjct: 647 CEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 208/399 (52%), Gaps = 5/399 (1%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M G+ +N TF VL + + +GK +H + + D +V ALV+ Y KCG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
D KVFD M R + +W MI+AY +E+ EA +FQ+ Q EG D VT +S+ A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
++ + V +F DL + +++ MYARC + E A VF M++++LI+W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
++++T + +G EAL F MQ PN VT + L++ T + + H I
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240
Query: 341 SNMKIDATLRNAVMDMYAKC--GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ T+ NA++++Y +C G+LD AE + ++ E+ +++WNVLI GY +HG R+
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEM--DEQQITAWNVLINGYTLHGRSRE 298
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
ALE + ++ E + D +TF S+L+AC+ + + EG+ ++ + + +V + +
Sbjct: 299 ALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTN 358
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
M + G + A + MP+ S W +L A HGE
Sbjct: 359 MYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGE 396
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/671 (36%), Positives = 368/671 (54%), Gaps = 18/671 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
R+ H+ +GL++ ++ Y G A+ LF + WNTM+
Sbjct: 186 REAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSV 245
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS- 143
+G E ++ M G+ + TF L AC+ L+ G+ +H +I+ L+
Sbjct: 246 LVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAA 305
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+S+V +ALVDMYA Q +VFD + S + L W MI Y QA EEAL LF +
Sbjct: 306 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 365
Query: 202 TQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ E G + T+ SV A + +AVHGY + + +QN+++ MYAR G
Sbjct: 366 MEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLG 425
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN---SDCKPNPVTALI 317
+ AR +F M++ D++SWN+++TG + G ++A L EMQ PN +T +
Sbjct: 426 KTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMT 485
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L+ C L + G++ HGY + + D + +A++DMYAKCG L + +F+ +
Sbjct: 486 LLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL--PR 543
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRK 436
RN +WNVLI YGMHG G +A F +M G +P+ +TF + L+ACSH+G++D G +
Sbjct: 544 RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQ 603
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND-SVWGALLLACRI 494
F M + V+P AC+VD+LGRAG L EA+ M+ M S W +L ACR+
Sbjct: 604 LFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRL 663
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H GEIA L +LEPE ++VL+ NIY+A+ +W ++R M+ +G+ K S
Sbjct: 664 HRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCS 723
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE I F + +P +EV+ +E++ E+ GY PD SC LHD++D D+ +L
Sbjct: 724 WIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVL 783
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+AFG++ P A ++V KNLRVCNDCH A +F+S + R+I++RD RFHHF
Sbjct: 784 RCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHF 843
Query: 670 EGGTCSCNDYW 680
G CSC DYW
Sbjct: 844 RNGQCSCGDYW 854
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 186/412 (45%), Gaps = 17/412 (4%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFL--SDSYVQAALVDMYAKCGQTDDGCKVFD 169
P +K+ A+ + +H +R G L V AL+ YA+CG+ +VF
Sbjct: 59 ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118
Query: 170 EM--SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
+ S D VS+ +I+A + + AL + G S T+VSV AV L
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178
Query: 228 LKA----QAVHGYAICNAFL--EDLCIQNSIVAMYARCGNVEKARLVFDMME--KRDLIS 279
A + H +A+ N L N++++MYAR G V A+ +F + D+++
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 238
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN+M++ +Q+G EA+ +M +P+ VT + AC+ L +GR+ H Y+I
Sbjct: 239 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298
Query: 340 NSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ + ++ + +A++DMYA + A +F+ + S + + WN +I GY G +
Sbjct: 299 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 358
Query: 399 ALEFFSQM-LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
AL F++M E G P T S+L AC+ + + K + ++
Sbjct: 359 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALM 418
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPE 509
DM R G A + + LP S W L+ C + G +A FQL E
Sbjct: 419 DMYARLGKTDVARRIFAMVDLPDVVS-WNTLITGCVVQGHVADA--FQLARE 467
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 43/304 (14%)
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQNSIVA 254
I QQ+ L S ++ SA L D A+A+H A+ L + N+++
Sbjct: 46 ITMASPQQQ--LDHSALPPAIKSAAA-LRDARSARAIHAAALRRGLLHRPSPAVANALLT 102
Query: 255 MYARCGNVEKARLVFDMM--EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP-- 310
YARCG + A VF + D +S+NS+++ AL LF ++
Sbjct: 103 AYARCGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRA 152
Query: 311 -----NPVTALILVS---ACTYL----GSRQLGRKFHGYIINSNMKIDATLR---NAVMD 355
+P+T+ LVS A ++L + +LGR+ H + + + + + R NA++
Sbjct: 153 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL-LHGHQRFAFNALLS 211
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYA+ G + A+ +F P +V +WN +++ G +A++ M+ GV+PD
Sbjct: 212 MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 271
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLG---RAGCLYEA 469
+TF S L ACS L+D GR+ A + K L+ V + +VDM + G +
Sbjct: 272 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVA--SALVDMYATHEQVGKARQV 329
Query: 470 FDMI 473
FDM+
Sbjct: 330 FDMV 333
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/671 (36%), Positives = 368/671 (54%), Gaps = 18/671 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
R+ H+ +GL++ ++ Y G A+ LF + WNTM+
Sbjct: 188 REAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSV 247
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS- 143
+G E ++ M G+ + TF L AC+ L+ G+ +H +I+ L+
Sbjct: 248 LVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAA 307
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+S+V +ALVDMYA Q +VFD + S + L W MI Y QA EEAL LF +
Sbjct: 308 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 367
Query: 202 TQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ E G + T+ SV A + +AVHGY + + +QN+++ MYAR G
Sbjct: 368 MEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLG 427
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN---SDCKPNPVTALI 317
+ AR +F M++ D++SWN+++TG + G ++A L EMQ PN +T +
Sbjct: 428 KTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMT 487
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L+ C L + G++ HGY + + D + +A++DMYAKCG L + +F+ +
Sbjct: 488 LLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL--PR 545
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRK 436
RN +WNVLI YGMHG G +A F +M G +P+ +TF + L+ACSH+G++D G +
Sbjct: 546 RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQ 605
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND-SVWGALLLACRI 494
F M + V+P AC+VD+LGRAG L EA+ M+ M S W +L ACR+
Sbjct: 606 LFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRL 665
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H GEIA L +LEPE ++VL+ NIY+A+ +W ++R M+ +G+ K S
Sbjct: 666 HRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCS 725
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE I F + +P +EV+ +E++ E+ GY PD SC LHD++D D+ +L
Sbjct: 726 WIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVL 785
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+AFG++ P A ++V KNLRVCNDCH A +F+S + R+I++RD RFHHF
Sbjct: 786 RCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHF 845
Query: 670 EGGTCSCNDYW 680
G CSC DYW
Sbjct: 846 RNGQCSCGDYW 856
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 186/412 (45%), Gaps = 17/412 (4%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFL--SDSYVQAALVDMYAKCGQTDDGCKVFD 169
P +K+ A+ + +H +R G L V AL+ YA+CG+ +VF
Sbjct: 61 ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 120
Query: 170 EM--SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
+ S D VS+ +I+A + + AL + G S T+VSV AV L
Sbjct: 121 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 180
Query: 228 LKA----QAVHGYAICNAFL--EDLCIQNSIVAMYARCGNVEKARLVFDMME--KRDLIS 279
A + H +A+ N L N++++MYAR G V A+ +F + D+++
Sbjct: 181 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 240
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN+M++ +Q+G EA+ +M +P+ VT + AC+ L +GR+ H Y+I
Sbjct: 241 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 300
Query: 340 NSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ + ++ + +A++DMYA + A +F+ + S + + WN +I GY G +
Sbjct: 301 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 360
Query: 399 ALEFFSQM-LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
AL F++M E G P T S+L AC+ + + K + ++
Sbjct: 361 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALM 420
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPE 509
DM R G A + + LP S W L+ C + G +A FQL E
Sbjct: 421 DMYARLGKTDVARRIFAMVDLPDVVS-WNTLITGCVVQGHVADA--FQLARE 469
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 43/304 (14%)
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQNSIVA 254
I QQ+ L S ++ SA L D A+A+H A+ L + N+++
Sbjct: 48 ITMASPQQQ--LDHSALPPAIKSAAA-LRDARSARAIHAAALRRGLLHRPSPAVANALLT 104
Query: 255 MYARCGNVEKARLVFDMM--EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP-- 310
YARCG + A VF + D +S+NS+++ AL LF ++
Sbjct: 105 AYARCGRLAAALEVFGSISDSAHDAVSFNSLIS----------ALCLFRRWDHALAALRA 154
Query: 311 -----NPVTALILVS---ACTYL----GSRQLGRKFHGYIINSNMKIDATLR---NAVMD 355
+P+T+ LVS A ++L + +LGR+ H + + + + + R NA++
Sbjct: 155 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL-LHGHQRFAFNALLS 213
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYA+ G + A+ +F P +V +WN +++ G +A++ M+ GV+PD
Sbjct: 214 MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 273
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLG---RAGCLYEA 469
+TF S L ACS L+D GR+ A + K L+ V + +VDM + G +
Sbjct: 274 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVA--SALVDMYATHEQVGKARQV 331
Query: 470 FDMI 473
FDM+
Sbjct: 332 FDMV 335
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/665 (36%), Positives = 396/665 (59%), Gaps = 15/665 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+++H+ L + L++ + +G ++ Y + ARS+F + + + S WN++I
Sbjct: 374 QEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVS--WNSIISGL 431
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+N E + + TMRR+G+ + ++ L +CAS I+ G+ +HG+ I+ G D
Sbjct: 432 DHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDV 491
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE-EALILFQKTQQ 204
V AL+ +YA+ ++ KVF M D VSW I A +E +A+ F + Q
Sbjct: 492 SVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQ 551
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G + VT +++ SAV L + + +H + ++ +D I+N+++A Y +C +E
Sbjct: 552 AGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMED 611
Query: 265 ARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
++F M E+RD +SWN+M++GYI NG +A+ L M + + T ++SAC
Sbjct: 612 CEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACA 671
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ + + G + H I + ++ + + +A++DMYAKCG +D A F ++ P RN+ SW
Sbjct: 672 SVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFF-ELMPV-RNIYSW 729
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I+GY HGHG KAL+ F+QM + G PDH+TF +LSACSH GL+DEG + F M +
Sbjct: 730 NSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGE 789
Query: 444 L-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC-RIH------ 495
+ + P ++H++CMVD+LGRAG + + + IK MP+ PN +W +L AC R +
Sbjct: 790 VYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTEL 849
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G AA L +LEP + +VL+SN++AA KW +V + R M+N +KK A S +
Sbjct: 850 GRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKD 909
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D+ +P +++Y K++ + +++ GY+P+ AL+D+E E++E +L+YHSEK
Sbjct: 910 GVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEK 969
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AF ++ E +++ KNLRVC DCH+AF++IS I R+II+RD+NRFHHF+GG CS
Sbjct: 970 LAIAF-VLTRQSELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICS 1028
Query: 676 CNDYW 680
C DYW
Sbjct: 1029 CQDYW 1033
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 236/482 (48%), Gaps = 25/482 (5%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y++ SC + Q+H + +GL + + I + G +A+ LF+ +
Sbjct: 46 YNRYRDSCT-VEDAHQLHLQIYKTGLTSDVFWCNTLVNI-FVRAGNLVSAQKLFDEMPQK 103
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC---ASNSLILE 128
S W+ ++ YA NG E L+ + +G+ N Y L+AC N L L
Sbjct: 104 NLVS--WSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKL- 160
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT-DDGCKVFDEMSVRDLVSWTVMITAYE 187
G +HG I ++ + SD + L+ MY+ C + DD +VF+E+ ++ SW +I+ Y
Sbjct: 161 GMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYC 220
Query: 188 QAEKPEEALILFQKTQQEGLLSDS-------VTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+ A LF Q+E + ++V+VA ++ G L Q + +
Sbjct: 221 RRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEK-S 279
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+F++DL + +++V+ +AR G ++ A+++F+ M+ R+ ++ N ++ G + Q EA +F
Sbjct: 280 SFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIF 339
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGS----RQLGRKFHGYII-NSNMKIDATLRNAVMD 355
EM++ + N + +L+SA T + ++ G++ H Y+I N+ + + + NA+++
Sbjct: 340 KEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVN 398
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+YAKC +D A ++F + PS+ V SWN +I+G + +A+ F M G+ P
Sbjct: 399 LYAKCNAIDNARSIFQ-LMPSKDTV-SWNSIISGLDHNERFEEAVACFHTMRRNGMVPSK 456
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
+ S LS+C+ G I G++ + K + +V ++ + C+ E +
Sbjct: 457 FSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFL 516
Query: 476 MP 477
MP
Sbjct: 517 MP 518
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/632 (35%), Positives = 369/632 (58%), Gaps = 21/632 (3%)
Query: 63 SLFNSIHNDKSYSFLWNTMIRAY------ANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+L IH +S+S N++++ + +NG E L M G + + +
Sbjct: 3 NLMRLIH--RSFSSSPNSVLQTFRPISQLCSNGRLQEAL---LEMVMLGPEIGFHCYDAL 57
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L AC + EG+ VH +I+T +L +Y++ L+ Y KC +D KV DEM +++
Sbjct: 58 LNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 117
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT MI+ Y Q EAL +F + + + T +V ++ + + + +HG
Sbjct: 118 VSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGL 177
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ + + + +S++ MYA+ G +E+AR +F+ + +RD++S +++ GY Q G EA
Sbjct: 178 IVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 237
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L +F +Q+ +PN VT L++A + L G++ H +++ + A L+N+++DM
Sbjct: 238 LEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 297
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDH 415
Y+KCG+L A+ +F+++ ER SWN ++ GY HG GR+ LE F M +E VKPD
Sbjct: 298 YSKCGNLSYAQRLFDNM--PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDA 355
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+T ++LS CSH + D G + M + +KP+ +HY C+VDMLGRAG + EAF+ I
Sbjct: 356 VTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFI 415
Query: 474 KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
K+MP P V G+LL ACR+H GE + L ++EPE+ G +V++SN+YA++ +W
Sbjct: 416 KRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWE 475
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
+V +R M K + K S I++ + + FH DR +P +EV K++ +++++K AG
Sbjct: 476 DVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAG 535
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y+PD+SC L+DV++E +E ML HSEKLA+ FG++ ++V KNLR+C DCH+ +
Sbjct: 536 YVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAK 595
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S ++ R++ +RD NRFH G CSC DYW
Sbjct: 596 IFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/574 (37%), Positives = 338/574 (58%), Gaps = 8/574 (1%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
F +L+ CA N ++E K HG +R D + L++ Y+KCG + +VFD M
Sbjct: 66 FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
R LVSW MI Y + EAL +F + + EG TI SV SA G D L+ +
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKK 185
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
+H ++ + +L + +++ +YA+CG + A VF+ M+ + ++W+SM+ GY+Q+
Sbjct: 186 LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKN 245
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
EALLL+ Q + N T ++ AC+ L + G++ H I S + + ++
Sbjct: 246 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASS 305
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
+DMYAKCG L + +F+++ E+N+ WN +I+G+ H ++ + F +M ++G+
Sbjct: 306 AVDMYAKCGSLRESYIIFSEVQ--EKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMH 363
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
P+ +TF+S+LS C H GL++EGR+ F M T + P V HY+CMVD+LGRAG L EA++
Sbjct: 364 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 423
Query: 472 MIKQMPLPPNDSVWGALLLACRI-----HGEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
+IK +P P S+WG+LL +CR+ E+AA LF+LEPE+ G VL+SNIYAA+ +
Sbjct: 424 LIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQ 483
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W E+ K R+ +++ +KK S I+ + F + +P +E+ ++++ +E++
Sbjct: 484 WEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRK 543
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY P + LHDVE +E +L HSEKLA+ FG+M L + V++ KNLR+C DCH
Sbjct: 544 FGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEF 603
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ S RR IIVRDANRFHHF G CSC ++W
Sbjct: 604 MKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 184/342 (53%), Gaps = 4/342 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y+ G AR +F+ + S WNTMI Y N E L+++ MR G
Sbjct: 104 LINAYSKCGFVELARQVFDGMLERSLVS--WNTMIGLYTRNRMESEALDIFWEMRNEGFK 161
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T VL AC +N LE K +H ++T + YV AL+D+YAKCG +D +V
Sbjct: 162 FSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQV 221
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F+ M + V+W+ M+ Y Q++ EEAL+L+++ Q+ L + T+ SV A L +
Sbjct: 222 FESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 281
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
++ + +H + F ++ + +S V MYA+CG++ ++ ++F ++++++ WN++++G+
Sbjct: 282 IEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGF 341
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKID 346
++ + E ++LF++MQ PN VT L+S C + G + GR+F + + + +
Sbjct: 342 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 401
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ ++D+ + G L A + I P E S W L+A
Sbjct: 402 VVHYSCMVDILGRAGLLSEAYELIKSI-PFEPTASIWGSLLA 442
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 354/575 (61%), Gaps = 16/575 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA--KCGQTDDGCKVFDEMSV 173
+LK C S + E K VH I++ G DS+ + LV A + G + C +F ++
Sbjct: 37 LLKRCKS---MEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQIEE 93
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+ MI + EEAL+L+ + + G+ D+ T V A L + + +
Sbjct: 94 PGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQI 153
Query: 234 HGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
H + + NA LE D+ +QN +++MY +CG +E A +VF+ M+++ + SW+S++ +
Sbjct: 154 HAH-VFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEM 212
Query: 293 ASEALLLFDEMQNSDCKPNPVTALI-LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
E L+L +M + L+ +SACT+LGS LGR HG ++ + +++ ++
Sbjct: 213 WHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKT 272
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
+++DMY KCG L+ +F ++ + +N S+ V+IAG +HG GR+AL FS MLEEG+
Sbjct: 273 SLIDMYVKCGSLEKGLCVFQNM--AHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGL 330
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAF 470
PD + + +LSACSHAGL+ EG +CF M + +KP ++HY CMVD++GRAG L EA+
Sbjct: 331 TPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAY 390
Query: 471 DMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASN 525
D+IK MP+ PND VW +LL AC++H GEIAA+ +F+L + G +++++N+YA +
Sbjct: 391 DLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYARAQ 450
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
KW V ++R +M K L + FS++E +++ F + D+ P + +Y ++ M ++K
Sbjct: 451 KWANVARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLK 510
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
GY PD+S L DV+++++ L +HS+KLA+AF ++ + + V++++NLR+CNDCH+
Sbjct: 511 FEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLRMCNDCHT 570
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+FIS IY R+I VRD+NRFHHF+ GTCSC DYW
Sbjct: 571 YTKFISVIYEREITVRDSNRFHHFKDGTCSCKDYW 605
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 193/384 (50%), Gaps = 10/384 (2%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIK--YTTYGEPNTARSLFNSIHNDK 72
LLK C + +++H+ + GL + G+ ++ + +G A S+F I ++
Sbjct: 37 LLKRCKSMEEFKKVHAHILKLGLFYDSF-CGSNLVASCALSRWGSMEYACSIFRQI--EE 93
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
SF +NTMIR N+ E L LY M GI +++T+PFVLKAC+ + EG +
Sbjct: 94 PGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQI 153
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H + G D +VQ L+ MY KCG + VF++M + + SW+ +I A+ E
Sbjct: 154 HAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMW 213
Query: 193 EEALILFQKTQQEGL-LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E L+L +EG ++ +VS SA LG + +HG + N ++ ++ S
Sbjct: 214 HECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTS 273
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY +CG++EK VF M ++ S+ M+ G +G+ EAL +F +M P+
Sbjct: 274 LIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPD 333
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENM 369
V + ++SAC++ G + G + + +M I T+++ ++D+ + G L A ++
Sbjct: 334 DVVYVGVLSACSHAGLVKEGFQCFNRMQFEHM-IKPTIQHYGCMVDLMGRAGMLKEAYDL 392
Query: 370 FNDIHPSERNVSSWNVLIAGYGMH 393
+ P + N W L++ +H
Sbjct: 393 IKSM-PIKPNDVVWRSLLSACKVH 415
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/691 (34%), Positives = 381/691 (55%), Gaps = 19/691 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MRR P T+ LL +C L R +H +T SGL + + ++ Y G
Sbjct: 443 MRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVC-VCNSLLSMYAQAG 501
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
A +F+++ S WN+M+ ++ +G + L M ++ + N TF
Sbjct: 502 SSEDAELVFHTMPARDLIS--WNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTA 559
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L AC + + + K+VH +I + + LV MY K G D+ KV M RD+
Sbjct: 560 LSACYN---LEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDV 616
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHG 235
V+W +I + + P + F ++EGLLS+ +TIV++ +LK +H
Sbjct: 617 VTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHA 676
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + F D +Q+S++ MYA+CG++ + +FD++ ++ +WN++ + G E
Sbjct: 677 HIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEE 736
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL M+N + + + ++ L G++ H +II ++D + NA MD
Sbjct: 737 ALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMD 796
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KCG++D + P R+ SWN+LI+ HG R+A E F +ML+ G+KPDH
Sbjct: 797 MYGKCGEIDDVFRILPI--PKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDH 854
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+TF S+LSACSH GL+DEG F+ MT + V ++H C++D+LGR+G L EA I
Sbjct: 855 VTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFID 914
Query: 475 QMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
+MP+PPN+ VW +LL AC++HG + AA+ LF+L +VL SN+ A++ +W +
Sbjct: 915 KMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGD 974
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V +R+ M+++ LKK A S I+ + F D+ +P ++Y K+E + + G+
Sbjct: 975 VENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGH 1034
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
MPD S AL D ++E +EH L HSE++A+AFG++N + +++ KNLRVC DCHS F+
Sbjct: 1035 MPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKL 1094
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+S I RKI+VRD+ RFHHF GG CSC+DYW
Sbjct: 1095 VSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 233/471 (49%), Gaps = 17/471 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQIH + GL++ +G ++ Y T+G + A LF I S W +++ Y
Sbjct: 269 RQIHGYVVKCGLMSNVF-VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVS--WTSLMVCY 325
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A+NGH E L +Y +R +G+ T V++ C G + GD+I++G + S
Sbjct: 326 ADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSS 385
Query: 146 Y-VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
V +L+ M+ ++ +VF+ M RD +SW +ITA + EE+L F ++
Sbjct: 386 VSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRR 445
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+D +TI ++ A G + + +HG + ++C+ NS+++MYA+ G+ E
Sbjct: 446 THPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSED 505
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A LVF M RDLISWNSM+ ++++G+ S A+LL EM + N VT +SAC
Sbjct: 506 AELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN 565
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L ++ H ++I+ + + + N ++ MY K G +D A+ + I P ER+V +WN
Sbjct: 566 LEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCK-IMP-ERDVVTWN 620
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC-SHAGLIDEGRKCFADMTK 443
LI G+ ++ F+ M EG+ ++IT ++L C S L+ G A +
Sbjct: 621 ALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVV 680
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLA 491
+ + + ++ M + G L + FD++ N S W A+ A
Sbjct: 681 AGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLAN----KNSSTWNAIFSA 727
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 235/462 (50%), Gaps = 12/462 (2%)
Query: 31 SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGH 90
+L +I Q ++ Y+ +G A+ +F+ +++ S WN MI + G
Sbjct: 171 ALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDAS--WNNMISGFVRVGW 228
Query: 91 CVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG-KVVHGDIIRTGFLSDSYVQA 149
+ ++ + M +G++ +SY ++ AC + + EG + +HG +++ G +S+ +V
Sbjct: 229 YHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGT 288
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
+L+ Y G + K+F+E+ ++VSWT ++ Y +E L +++ + GL+
Sbjct: 289 SLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLIC 348
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF-LEDLCIQNSIVAMYARCGNVEKARLV 268
T+ +V G GD + G I + + + NS+++M+ +VE+A V
Sbjct: 349 TGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRV 408
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F+ M++RD ISWNS++T NG+ E+L F M+ + K + +T L+ AC
Sbjct: 409 FNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHL 468
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ GR HG I S ++ + + N+++ MYA+ G + AE +F+ + P+ R++ SWN ++A
Sbjct: 469 KWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTM-PA-RDLISWNSMMA 526
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
+ G A+ +ML+ +++TFT+ LSAC + +++ + A + +V
Sbjct: 527 SHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAVHH 583
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
+ +V M G+ G + EA + K M P D V W AL+
Sbjct: 584 NLIIGNTLVTMYGKFGLMDEAQKVCKIM--PERDVVTWNALI 623
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 171/351 (48%), Gaps = 4/351 (1%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H ++ +++ LV+MY+K G VFD+M R+ SW MI+ + +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLC 247
+A+ F + G+ S I S+ +A + G + + A+ +HGY + + ++
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ S++ Y G+V +A +F+ +E+ +++SW S++ Y NG E L ++ ++++
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA-TLRNAVMDMYAKCGDLDTA 366
T ++ C G + +G + G +I S + + ++ N+++ M+ ++ A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+FN++ ER+ SWN +I +G ++L F M K D+IT +++L AC
Sbjct: 406 SRVFNNMQ--ERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACG 463
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
A + GR +TK ++ V ++ M +AG +A + MP
Sbjct: 464 SAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMP 514
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/625 (36%), Positives = 358/625 (57%), Gaps = 46/625 (7%)
Query: 98 YSTMRRSGISSNSYTFPFVLKACA----SNSLILEGKVVHGDIIRTGFLSDSYVQAALVD 153
Y+ M G ++YTFP +LKA A + + VH ++R G +++V ++LV
Sbjct: 7 YARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVA 66
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
Y G + E V+W +I+ + + + E+ F + G VT
Sbjct: 67 AYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVT 124
Query: 214 IVSVASAVGQ-LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC------------- 259
VSV SA G+ DVL VHG + + L DL ++N++V MYA C
Sbjct: 125 YVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGM 184
Query: 260 ------------------GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
G V++AR +FD M +RD +SW +M+ GY+ + EAL +F
Sbjct: 185 QVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFR 244
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
EMQ S+ + T + +++AC LG+ ++G Y+ +K+DA + NA++DMY+KCG
Sbjct: 245 EMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCG 304
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
++ A ++F +H R+ +W +I G ++G+ +A+E F +M+ PD +TF +
Sbjct: 305 SIERALDVFKGMH--HRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGV 362
Query: 422 LSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L+AC+HAGL+D+GR+ F M + ++ P V HY C++D+LGRAG + EA D I QMP+ P
Sbjct: 363 LTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTP 422
Query: 481 NDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
N ++WG LL ACR+HG E+ A L +L+PE++ ++L+SNIYA N+W +V +LR
Sbjct: 423 NSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRH 482
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
+ KG+KK S+IE I F D+ +P KE+Y K+ES+ ++ GY PD++
Sbjct: 483 AIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTE 542
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
+V +++++ +L +HSEKLA+AF +++ P V+++ KNLR+C DCH+A + IS +Y
Sbjct: 543 VFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRLYG 602
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R+++VRD RFHHF G CSC DYW
Sbjct: 603 REVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 184/386 (47%), Gaps = 40/386 (10%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL-ILEGKVVHGDI 136
WN +I + G E+ + M R+G + T+ VL AC + +L G VHG +
Sbjct: 90 WNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRV 149
Query: 137 IRTGFLSDSYVQAALVDMYAKC-------------------------------GQTDDGC 165
+ +G L D V+ ALVDMYA+C GQ D+
Sbjct: 150 VGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEAR 209
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+FD M RD VSWT MI Y A + EAL +F++ Q + +D T+VSV +A QLG
Sbjct: 210 DLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLG 269
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + V Y D + N+++ MY++CG++E+A VF M RD +W +++
Sbjct: 270 ALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIIL 329
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMK 344
G NG EA+ +F M P+ VT + +++ACT+ G GR+F +I + N+
Sbjct: 330 GLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIA 389
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ ++D+ + G + A + + + P N + W L+A +HG+
Sbjct: 390 PNVVHYGCIIDLLGRAGKITEALDTIDQM-PMTPNSTIWGTLLAACRVHGNSEIGELVAE 448
Query: 405 QMLEEGVKPD----HITFTSILSACS 426
++LE + P+ +I ++I + C+
Sbjct: 449 RLLE--LDPENSMVYILLSNIYAKCN 472
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/671 (36%), Positives = 368/671 (54%), Gaps = 18/671 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
R+ H+ +GL++ ++ Y G A+ LF + WNTM+
Sbjct: 34 REAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSV 93
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS- 143
+G E ++ M G+ + TF L AC+ L+ G+ +H +I+ L+
Sbjct: 94 LVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAA 153
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+S+V +ALVDMYA Q +VFD + S + L W MI Y QA EEAL LF +
Sbjct: 154 NSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFAR 213
Query: 202 TQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ E G + T+ SV A + +AVHGY + + +QN+++ MYAR G
Sbjct: 214 MEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLG 273
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN---SDCKPNPVTALI 317
+ AR +F M++ D++SWN+++TG + G ++A L EMQ PN +T +
Sbjct: 274 KTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMT 333
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L+ C L + G++ HGY + + D + +A++DMYAKCG L + +F+ +
Sbjct: 334 LLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRL--PR 391
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRK 436
RN +WNVLI YGMHG G +A F +M G +P+ +TF + L+ACSH+G++D G +
Sbjct: 392 RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQ 451
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND-SVWGALLLACRI 494
F M + V+P AC+VD+LGRAG L EA+ M+ M S W +L ACR+
Sbjct: 452 LFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRL 511
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H GEIA L +LEPE ++VL+ NIY+A+ +W ++R M+ +G+ K S
Sbjct: 512 HRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCS 571
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE I F + +P +EV+ +E++ E+ GY PD SC LHD++D D+ +L
Sbjct: 572 WIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVL 631
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+AFG++ P A ++V KNLRVCNDCH A +F+S + R+I++RD RFHHF
Sbjct: 632 RCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHF 691
Query: 670 EGGTCSCNDYW 680
G CSC DYW
Sbjct: 692 RNGQCSCGDYW 702
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/647 (35%), Positives = 370/647 (57%), Gaps = 14/647 (2%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
+++ +I Y G A +F S+ S WNT++ N + L + M
Sbjct: 283 VYVANALIAMYAKCGRMEDAGRVFESMLCRDYVS--WNTLLSGLVQNELYSDALNYFRDM 340
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
+ SG + + ++ A + +L+GK VH IR G S+ + LVDMYAKC
Sbjct: 341 QNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCV 400
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
F+ M +DL+SWT +I Y Q E EA+ LF+K Q +G+ D + I SV A
Sbjct: 401 KYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC 460
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L + +HGY + L D+ +QN+IV +Y G+++ AR F+ + +D++SW
Sbjct: 461 SGLKSRNFIREIHGY-VFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWT 519
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
SM+T + NG EAL LF ++ ++ +P+ + + +SA L S + G++ HG++I
Sbjct: 520 SMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK 579
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
++ + ++++DMYA CG ++ + MF+ + +R++ W +I GMHG G KA+
Sbjct: 580 GFFLEGPIASSLVDMYACCGTVENSRKMFHSV--KQRDLILWTSMINANGMHGCGNKAIA 637
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDML 460
F +M ++ V PDHITF ++L ACSH+GL+ EG++ F M ++P +HYACMVD+L
Sbjct: 638 LFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLL 697
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
R+ L EA+ ++ MP+ P+ +W ALL AC IH GE+AA L Q + E++G +
Sbjct: 698 SRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYA 757
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNI+AA +W +V ++R MK GLKK S IE I F D+ +P ++Y
Sbjct: 758 LISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYL 817
Query: 576 KVESMAVEI-KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV-VQV 633
K+ + K GY+ H+V +E++ ML HSE+LA+ +G++ +TP+ +++
Sbjct: 818 KLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLL-VTPKGTCIRI 876
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
TKNLR+C+DCH+ F+ S + +R ++VRDANRFHHFE G CSC D+W
Sbjct: 877 TKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 219/403 (54%), Gaps = 9/403 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ L S L + L K+++ Y G A +F+ + +S WN ++ A+
Sbjct: 66 QQLHALLLKSHL---SAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFS--WNALMGAF 120
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
++G +E +ELY MR G++ ++ TFP VLKAC + G +HG ++ G+
Sbjct: 121 VSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFV 180
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDE--MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
+V AL+ MY KCG +FD M D VSW +I+A+ EAL LF++ Q
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQ 240
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+ G+ S++ T V+ V V +HG + + D+ + N+++AMYA+CG +E
Sbjct: 241 EVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRME 300
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
A VF+ M RD +SWN++L+G +QN S+AL F +MQNS KP+ V+ L L++A
Sbjct: 301 DAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASG 360
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
G+ G++ H Y I + + + + N ++DMYAKC + + F +H E+++ SW
Sbjct: 361 RSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMH--EKDLISW 418
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+IAGY + +A+ F ++ +G+ D + S+L ACS
Sbjct: 419 TTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 196/376 (52%), Gaps = 6/376 (1%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
++L L ST + S + +L C + + +G+ +H ++++ +++ LV
Sbjct: 29 QSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLV 86
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
MY KCG D KVFDEMS R + SW ++ A+ + K EA+ L++ + G+ D+
Sbjct: 87 LMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDAC 146
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD-- 270
T SV A G LG+ +HG A+ + E + + N+++AMY +CG++ AR++FD
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGI 206
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
MMEK D +SWNS+++ ++ G EAL LF MQ N T + + +L
Sbjct: 207 MMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKL 266
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G HG ++ SN D + NA++ MYAKCG ++ A +F + R+ SWN L++G
Sbjct: 267 GMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLC--RDYVSWNTLLSGL 324
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+ AL +F M G KPD ++ ++++A +G + +G++ A + + +
Sbjct: 325 VQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNM 384
Query: 451 KHYACMVDMLGRAGCL 466
+ +VDM + C+
Sbjct: 385 QIGNTLVDMYAKCCCV 400
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 166/321 (51%), Gaps = 11/321 (3%)
Query: 17 KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
+S N L +++H+ +GL + + +G ++ Y F +H S
Sbjct: 361 RSGNLLKG-KEVHAYAIRNGL-DSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLIS- 417
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA---SNSLILEGKVVH 133
W T+I YA N +E + L+ ++ G+ + VL+AC+ S + I E +H
Sbjct: 418 -WTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIRE---IH 473
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G + + L+D +Q A+V++Y + G D + F+ + +D+VSWT MIT P
Sbjct: 474 GYVFKRD-LADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPV 532
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EAL LF +Q + DS+ I+S SA L + K + +HG+ I F + I +S+V
Sbjct: 533 EALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLV 592
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
MYA CG VE +R +F +++RDLI W SM+ +G ++A+ LF +M + + P+ +
Sbjct: 593 DMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHI 652
Query: 314 TALILVSACTYLGSRQLGRKF 334
T L L+ AC++ G G++F
Sbjct: 653 TFLALLYACSHSGLMVEGKRF 673
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 1/242 (0%)
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ +V MY +CG++ A VFD M +R + SWN+++ ++ +G+ EA+ L+ +M+
Sbjct: 81 LATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLG 140
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+ T ++ AC LG +LG + HG + + NA++ MY KCGDL A
Sbjct: 141 VAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGAR 200
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ I + + SWN +I+ + G+ +AL F +M E GV + TF + L
Sbjct: 201 VLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVED 260
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
+ G + K + +V ++ M + G + +A + + M L + W
Sbjct: 261 PSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESM-LCRDYVSWNT 319
Query: 488 LL 489
LL
Sbjct: 320 LL 321
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/596 (36%), Positives = 347/596 (58%), Gaps = 18/596 (3%)
Query: 96 ELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH-----GDIIRTGFLSDSYVQAA 150
E + +SG + + +++ CA + EG+ +H G + R FLS+
Sbjct: 27 EAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSN-----L 81
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
LVDMY KCG + +VFD M +++ SWT+++ + Q+ + EA+ LF + QEG L D
Sbjct: 82 LVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPD 141
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
V ++ + G + + + +H A DL N+I+ MY +CG++ +A VF
Sbjct: 142 RVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFT 201
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M ++++ISW++M+ + QN A EALL F MQ + + +T + ++ A T +G+ +L
Sbjct: 202 RMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALEL 261
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G+ H I+ + + + N +++MY KCG D A ++F+ + E+NV SWN ++A Y
Sbjct: 262 GKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSM--VEKNVVSWNAMLAAY 319
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPE 449
G +G R+AL F M EGV+P+ ITF +IL CSH+G + F +M + + P
Sbjct: 320 GQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPR 379
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLF 504
H+ C++DMLGR+G L EA ++I+ MP+P + +W +LL AC H AA F
Sbjct: 380 EVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAF 439
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
Q EP ++++SN+YAA KW E K+R+ M+ G++K A S IE K + F D
Sbjct: 440 QREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGD 499
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
++P ++K ++ + E+++ GY PD +H +E+E+++ +L YHSEKLAVAFGI +
Sbjct: 500 SIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIAS 559
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P + + KNLRVC+DCHSA +FIS + R+I VRD+NRFHHF+ G CSC DYW
Sbjct: 560 TPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 195/394 (49%), Gaps = 20/394 (5%)
Query: 10 GFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
G +QL++ C +L R+IH + SG +++ L ++ Y G A+ +F+
Sbjct: 42 GDLEQLIRRCAGAKALEEGRRIHRWMD-SGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFD 100
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
++ + +S W ++ + +G VE ++L+ M + G + + +C + +
Sbjct: 101 AMQHKNVFS--WTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKAL 158
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+G+ +H G SD A+++MY KCG + VF M ++++SW+ MI A+
Sbjct: 159 SQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAF 218
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q E +EAL+ F+ QQEG+ D +T VSV A +G + +A+H + +
Sbjct: 219 CQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSI 278
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N++V MY +CG+ + AR VFD M +++++SWN+ML Y QNG++ EAL LFD M
Sbjct: 279 VVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLE 338
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFH---GYIINSNMKIDATLRNA----VMDMYAK 359
+PN +T + ++ C++ G KF + + T R ++DM +
Sbjct: 339 GVRPNDITFVTILYCCSHSG------KFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGR 392
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
G L+ AE + + P + W L+ H
Sbjct: 393 SGKLEEAEELIQAM-PVPADAVLWTSLLCACVTH 425
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/626 (37%), Positives = 348/626 (55%), Gaps = 44/626 (7%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF S+ + K+Y W M+ YA NG ++ ++ + MR G+ SN +TFP +L AC
Sbjct: 188 AEYLFFSLPDRKNY-VQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
S S G+ VHG II +GF + YVQ+ALVDMYAKCG + D M + D+V W
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWN 306
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI EEAL+LF K + D T SV ++ ++ ++VH I
Sbjct: 307 SMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKT 366
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F + N++V MYA+ GN+ A VF+ + +D+ISW S++TGY+ NG +AL LF
Sbjct: 367 GFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLF 426
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M+ + + + SAC L + GR+ H I S+ + N+++ MYAKC
Sbjct: 427 CDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKC 486
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G L+ A +F+ + RNV SW +I GY +
Sbjct: 487 GCLEDAIRVFDSMET--RNVISWTAIIVGYAQN--------------------------- 517
Query: 421 ILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
GL++ G+ F M K+ +KP HYACM+D+LGRAG + EA ++ +M +
Sbjct: 518 --------GLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVE 569
Query: 480 PNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P+ ++W +LL ACR+HG E A L +LEP ++ +VL+SN+++ + +W + +R
Sbjct: 570 PDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIR 629
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
MK G+ K +S IE + F + DR +P E+Y K++ M + IK AG++PD++
Sbjct: 630 RAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMN 689
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
AL D+++E +E L YHSEKLAVAFG++ + A +++ KNLRVC DCHSA ++IS I+
Sbjct: 690 FALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIF 749
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
+R II+RD N FHHF G CSC D+W
Sbjct: 750 KRHIILRDLNCFHHFIEGKCSCGDFW 775
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 173/347 (49%), Gaps = 4/347 (1%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D Y ++ YA G + K+F+E +++ ++W+ +++ Y + E L F +
Sbjct: 67 DKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+G T+ SV A L + + +H YAI ++ + +V MY++C +
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLL 186
Query: 264 KAR-LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
+A L F + ++++ + W +MLTGY QNG++ +A+ F EM+N + N T +++AC
Sbjct: 187 EAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
T + + GR+ HG II S + +++A++DMYAKCGDL +A + + + + V
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDD--VVC 304
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
WN +I G HG+ +AL F +M ++ D T+ S+L + + + G +
Sbjct: 305 WNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTI 364
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
K +VDM + G L A D+ ++ L + W +L+
Sbjct: 365 KTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI-LDKDVISWTSLV 410
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 39/298 (13%)
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL------------- 277
+ +HG A ++ L+ N +++ ++ G V++AR +FD M RD
Sbjct: 26 RCIHGIAHYSSNLD----SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANL 81
Query: 278 ------------------ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
I+W+S+++GY +NG E L F +M + KP+ T ++
Sbjct: 82 GNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVL 141
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC+ L G+ H Y I ++ + + ++DMY+KC L AE +F + P +N
Sbjct: 142 RACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSL-PDRKN 200
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
W ++ GY +G KA++ F +M +G++ +H TF SIL+AC+ GR+
Sbjct: 201 YVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHG 260
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ P V + +VDM + G L A ++ M + +D V W ++++ C HG
Sbjct: 261 CIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEI--DDVVCWNSMIVGCVTHG 316
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 41/217 (18%)
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N +L+ +NG+ EA LFD+M D T I++SA
Sbjct: 41 NQLLSELSKNGRVDEARKLFDQMPYRD----KYTWNIMISA------------------- 77
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
YA G+L A +FN+ +N +W+ L++GY +G + L
Sbjct: 78 ----------------YANLGNLVEARKLFNE--TPIKNSITWSSLVSGYCKNGCEVEGL 119
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
FSQM +G KP T S+L ACS L+ G+ K+ ++ + +VDM
Sbjct: 120 RQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMY 179
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ CL EA + +P N W A+L +GE
Sbjct: 180 SKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGE 216
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/509 (40%), Positives = 322/509 (63%), Gaps = 12/509 (2%)
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYA 237
W MI Y +++ P EA++L+ +G+ ++ T + ++ +L + VH +
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
I + F DL ++N+++ +Y+ GN+ AR +FD RDL+S+N+M+ GY + Q AL
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDM 356
LF EMQNSD VT + ++SAC LG+ LG++ +H YI N + L AVMDM
Sbjct: 122 CLFGEMQNSD----EVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAKCG +D+A +F + + + +N +IAG HG G A+ F +++ G+KPD +
Sbjct: 178 YAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEV 237
Query: 417 TFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
TF +L AC H+GLI+EG+K F M +KP+++HY CMVD+LGR GCL EA+D++++
Sbjct: 238 TFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQK 297
Query: 476 MPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP N +W ALL ACR HG EIA L ++E +H +VL+SNI A +N+W E
Sbjct: 298 MPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEA 357
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
++R+ M++ G++KP +S IE G I F +D+ +P KE+ ++ MA+ +K AGY+
Sbjct: 358 RQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYV 417
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P+ + + D+++E++E +++YHSEKLA+AFG+M +P +++ KNLR+C DCH AF+ +
Sbjct: 418 PNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLV 477
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
S IY R+I VRD RFHHF G+CSC D+
Sbjct: 478 SEIYGREITVRDTMRFHHFRNGSCSCMDF 506
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 185/341 (54%), Gaps = 17/341 (4%)
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISS-NSYTFPFVLKACASNSLILEGKVVHGD 135
+WNTMIR Y+ + + E + LY +M GI+ N++TFPF+L +CA S + G VH
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
II+ GF SD +V+ AL+ +Y+ G + +FDE VRDLVS+ MI Y + +PE A
Sbjct: 61 IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 120
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDV-LKAQAVHGYAICNAFLEDLCIQNSIVA 254
L LF + Q SD VT+V+V SA +LG L + H Y F ++ + +++
Sbjct: 121 LCLFGEMQN----SDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMD 176
Query: 255 MYARCGNVEKARLVFDMMEK--RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
MYA+CG+++ A +F + K + +NSM+ G Q+G A+ +F E+ ++ KP+
Sbjct: 177 MYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDE 236
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++ AC + G + G+K + N+ +K ++D+ + G L+ A ++
Sbjct: 237 VTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQ 296
Query: 372 DIHPSERNVSSWNVLIAGYGMHGH-------GRKALEFFSQ 405
+ P E N W L++ HG+ G+K LE +Q
Sbjct: 297 KM-PFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQ 336
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L +C L + ++++ +G+ NQ L A ++ Y G ++A +F + +
Sbjct: 138 VLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKN 197
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
F++N+MI A +G + ++ + +G+ + TF VL AC + LI EGK
Sbjct: 198 MKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKK 257
Query: 132 VHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA 185
+ + G +VD+ + G ++ + +M + V W +++A
Sbjct: 258 LFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSA 313
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/569 (36%), Positives = 342/569 (60%), Gaps = 7/569 (1%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ ACA + + + + +H + + F D+++ +L+ MY KC D VFD+M +D+
Sbjct: 58 ITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDM 117
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT +I Y Q + P EA+ L + + T S+ A G D + +H
Sbjct: 118 VSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHAL 177
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
A+ + ED+ + ++++ MYARCG ++ A VFD ++ ++ +SWN++++G+ + G A
Sbjct: 178 AVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESA 237
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L+ F EM + + T + S+ LG+ + G+ H ++I S K+ A + N ++DM
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDM 297
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAK G + A +F+ + +++ +WN ++ + +G G++A+ F +M + GV + I
Sbjct: 298 YAKSGSMIDARKVFDRV--DNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQI 355
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
TF IL+ACSH GL+ EG++ F M + ++PE+ HY +V +LGRAG L A I +M
Sbjct: 356 TFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKM 415
Query: 477 PLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
P+ P +VWGALL ACR+H G+ AA+++F+L+P+ +G VL+ NIYA++ +W
Sbjct: 416 PMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAA 475
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
++R MK G+KK A S +E + F D +P +E+YK ++ +I+ GY+P
Sbjct: 476 RVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVP 535
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
D+ L V+D+++E L YHSEKLA+AF ++ + A +++ KN+R+C DCHSAF++IS
Sbjct: 536 DMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFKYIS 595
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ R+I+VRD NRFHHF G+CSC DYW
Sbjct: 596 KVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 202/397 (50%), Gaps = 8/397 (2%)
Query: 4 LGPSTEGFYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
L P T Y + +C L R+IH+ L +S A L +I Y
Sbjct: 47 LAP-TPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAF-LDNSLIHMYCKCRSVLD 104
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR++F+ + S W ++I YA N VE + L M + N +TF +LKA
Sbjct: 105 ARNVFDQMRRKDMVS--WTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAA 162
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ + G+ +H ++ G+ D YV +AL+DMYA+CG+ D VFD++ ++ VSW
Sbjct: 163 GAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I+ + + E AL+ F + + G + T SV S++ +LG + + + VH + I +
Sbjct: 223 ALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKS 282
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ N+++ MYA+ G++ AR VFD ++ +DL++WNSMLT + Q G EA+ F
Sbjct: 283 RQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHF 342
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+EM+ S N +T L +++AC++ G + G+++ + +++ + V+ + +
Sbjct: 343 EEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRA 402
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
G L+ A +F P E + W L+A MH + +
Sbjct: 403 GLLNYAL-VFIFKMPMEPTAAVWGALLAACRMHKNAK 438
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 9/284 (3%)
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
S +A Q ++ A+ +H + + F D + NS++ MY +C +V AR VFD M ++
Sbjct: 56 SFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRK 115
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
D++SW S++ GY QN EA+ L M KPN T L+ A GR+ H
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIH 175
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ D + +A++DMYA+CG +D A +F+ + +N SWN LI+G+ G
Sbjct: 176 ALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKL--DSKNGVSWNALISGFARKGD 233
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
G AL F++ML G + H T++S+ S+ + G +++G+ A + K K
Sbjct: 234 GESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNT 293
Query: 456 MVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHG 496
++DM ++G + +A FD + L W ++L A +G
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDNKDL----VTWNSMLTAFAQYG 333
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
D + + P P ++AC + + RK H ++ +S DA L N+++ MY K
Sbjct: 39 LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCK 98
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
C + A N+F+ + +++ SW LIAGY + +A+ ML+ KP+ TF
Sbjct: 99 CRSVLDARNVFDQMR--RKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFA 156
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
S+L A GR+ A K +V + ++DM R G + A + ++
Sbjct: 157 SLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-S 215
Query: 480 PNDSVWGALL 489
N W AL+
Sbjct: 216 KNGVSWNALI 225
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/684 (34%), Positives = 383/684 (55%), Gaps = 17/684 (2%)
Query: 8 TEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
T+ Y +L +C SL+ +IH + G +G +I Y G A
Sbjct: 104 TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVF-VGTALINMYNKCGSVRGAWDS 162
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F + + S W MI A + LY M+ G+ N T V A +
Sbjct: 163 FKRLEHRDVVS--WTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPN 220
Query: 125 LILEGKVVHGDIIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ EGK V+G ++ +G + SD V + V+M+ G D ++F++M RD+V+W ++I
Sbjct: 221 YLSEGKFVYG-LVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVI 279
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
T Y Q E EA+ LF + QQ+G+ ++ +T V + + L + K + +H +
Sbjct: 280 TLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYD 339
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
D + +++++Y RC +A +F M +D+I+W M Y QNG EAL LF EM
Sbjct: 340 RDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEM 399
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
Q +P T + ++ C +L + Q GR+ H +II + +++ + A+++MY KCG +
Sbjct: 400 QLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKM 459
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A ++F + ++R++ WN ++ Y HG+ + L+ F+QM +GVK D ++F S+LS
Sbjct: 460 AEAMSVFEKM--AKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLS 517
Query: 424 ACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP-LPPN 481
A SH+G + +G + F M + S+ P + Y C+VD+LGRAG + EA D++ ++ P+
Sbjct: 518 ALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPD 577
Query: 482 DSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRED 536
+W LL ACR H + AA + + +P H+G +V++SN+YAA+ W V ++R+
Sbjct: 578 GILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKL 637
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCA 596
M+++G+KK S IE + F DR +P +Y +++ + E++ AGY+PD
Sbjct: 638 MRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMI 697
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
LHDVEDE +E ML YHSE+LA+AFG+++ P ++V KNLRVC+DCH+A ++IS + R
Sbjct: 698 LHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGR 757
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
+I+VRD +RFH+F+ G CSC DYW
Sbjct: 758 EILVRDTHRFHNFKDGRCSCKDYW 781
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/494 (27%), Positives = 245/494 (49%), Gaps = 10/494 (2%)
Query: 6 PSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P T F+ LL+ C+ ++ R++H + G L G +I Y G A+
Sbjct: 2 PDT-AFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCG-HLIQMYAQCGSVPEAQ 59
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F + ++ F W MI Y G L ++ M+ + T+ +L ACAS
Sbjct: 60 QVFEIL--ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAS 117
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
+ +G +HG I++ GF D +V AL++MY KCG F + RD+VSWT M
Sbjct: 118 TESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAM 177
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I A Q ++ A L+++ Q +G++ + +T+ +V +A G + + + V+G
Sbjct: 178 IAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVM 237
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
D+ + NS V M+ G + AR +F+ M RD+++WN ++T Y+QN EA+ LF
Sbjct: 238 ESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGR 297
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
+Q K N +T +++++ T L S G+ H + + DA + A+M +Y +C
Sbjct: 298 LQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEA 357
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
A +F D+ ++V +W V+ Y +G ++AL+ F +M EG +P T ++L
Sbjct: 358 PGQAWKIFVDM--GSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVL 415
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
C+H + +GR+ + + + + E+ +++M G+ G + EA + ++M +
Sbjct: 416 DTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRDI 474
Query: 483 SVWGALLLACRIHG 496
VW ++L A HG
Sbjct: 475 LVWNSMLGAYAQHG 488
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 165/350 (47%), Gaps = 17/350 (4%)
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D+ V++ +V + VH + F ++ + ++ MYA+CG+V +A+ VF
Sbjct: 3 DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+++E++D+ +W M+ Y Q G AL +F +MQ D P VT + +++AC S +
Sbjct: 63 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G + HG I+ + D + A+++MY KCG + A + F + R+V SW +IA
Sbjct: 123 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL--EHRDVVSWTAMIAA 180
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
H A + +M +GV P+ IT ++ +A + EG+ + ++ ++ +
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL----------ACRIHGEIA 499
V+ V+M G AG L +A + + M + + W ++ A R+ G +
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFGRLQ 299
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
+ + + FVLM N+Y + + + E +K G + A +
Sbjct: 300 QDGV----KANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVA 345
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 100/199 (50%), Gaps = 6/199 (3%)
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP+ + L+ C+ + GR+ H ++ + + + + ++ MYA+CG + A+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F + ++V +W +I Y G +AL F QM EE V P +T+ +IL+AC+
Sbjct: 61 VFEIL--ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 118
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
+ +G + + + + +V +++M + G + A+D K+ L D V W A
Sbjct: 119 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKR--LEHRDVVSWTA 176
Query: 488 LLLACRIHGEIA-ANYLFQ 505
++ AC H + A A +L++
Sbjct: 177 MIAACVQHDQFALARWLYR 195
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/483 (43%), Positives = 310/483 (64%), Gaps = 12/483 (2%)
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC----GNVE 263
L + T V A +G++ ++VHG + F +++ +QN++V MY C G +E
Sbjct: 7 LPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIE 66
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
AR VFD M K D +SW++M+ GY++ G++S+A+ LF EMQ P+ +T + ++SACT
Sbjct: 67 FARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACT 126
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
LG+ +LG+ Y+ ++ + L NA++DM+AKCGD+D A N+F + ERN+ SW
Sbjct: 127 GLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMR--ERNIVSW 184
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
+I G MHG G +A+ F +M+ GV PD + F +LSACSH+GL+D+G++ F M K
Sbjct: 185 TSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRK 244
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA--- 499
S+ P+++HY CMVDML RAG + EA +++MP+ PN VW L+ ACR HGE+
Sbjct: 245 DFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGE 304
Query: 500 --ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
L + EP H +VL+SNIYA + W + ++RE M KG+KK ++IE +I
Sbjct: 305 KITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEI 364
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D+ + KE+Y+ V+ M E+K AGYMP + L D++DED+E LN HSEKLA
Sbjct: 365 YEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLA 424
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+AF ++N P ++++ KNLRVC+DCHSA +FIS IY R+I+VRD NRFHHF+ G CSC
Sbjct: 425 IAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCR 484
Query: 678 DYW 680
D+W
Sbjct: 485 DFW 487
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 172/325 (52%), Gaps = 18/325 (5%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC--- 165
N +T+PFVLKACA + GK VHG +++ GF + VQ LV MY C + G
Sbjct: 9 NKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFA 68
Query: 166 -KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
KVFDEM D VSW+ MI Y + + +A+ LF++ Q +G+ D +T+VSV SA L
Sbjct: 69 RKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGL 128
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
G + + V Y +++ + N+++ M+A+CG+V+KA +F M +R+++SW S++
Sbjct: 129 GALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVI 188
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
G +G+ EA+ +F+EM S P+ V + L+SAC++ G G+++ +M+
Sbjct: 189 GGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYF-----DSMR 243
Query: 345 IDATLRNAV------MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
D ++ + +DM + G + A ++ P + N W LI HG +
Sbjct: 244 KDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEM-PIDPNPVVWRTLINACRAHGELKL 302
Query: 399 ALEFFSQMLEEGVKPDHITFTSILS 423
+ Q++ +P H + +LS
Sbjct: 303 GEKITRQLIRN--EPMHESNYVLLS 325
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 54/363 (14%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTT----YGEPNTARSL 64
Y +LK+C + +L + +H S+ G ++ +++ ++ Y G AR +
Sbjct: 13 YPFVLKACAGIGNLNLGKSVHGSVMKFGFGDE-VNVQNTLVHMYCCCRGGEGGIEFARKV 71
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ ++ KS S W+ MI Y G + + L+ M+ G+ + T VL AC
Sbjct: 72 FDEMY--KSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLG 129
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ GK V + + + + AL+DM+AKCG D +F M R++VSWT +I
Sbjct: 130 ALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIG 189
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
+ EA+ +F++ + G+ D V + + SA
Sbjct: 190 GLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSAC----------------------- 226
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI-----SWNSMLTGYIQNGQASEALLL 299
+ G V+K + FD M K I + M+ + G EAL
Sbjct: 227 ------------SHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKF 274
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
EM PNPV L++AC G +LG K +I N + + + ++YAK
Sbjct: 275 VQEMP---IDPNPVVWRTLINACRAHGELKLGEKITRQLIR-NEPMHESNYVLLSNIYAK 330
Query: 360 CGD 362
D
Sbjct: 331 MSD 333
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 334/576 (57%), Gaps = 9/576 (1%)
Query: 112 TFPFVLKACASNSLILE-GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
T P LK+ + L G+ +H ++ ++ +V +L+ +YAKCG +VFDE
Sbjct: 72 TIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDE 131
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M V WT +ITAY A EA+ + + G+ DS T V V +A ++ D+
Sbjct: 132 MPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG 191
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ V A + + + + V +Y +CG + KAR VFD M +D ++W +M+ GY N
Sbjct: 192 ETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASN 251
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G EAL LF MQ KP+ +SACT LG+ LGR+ + + L
Sbjct: 252 GHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 311
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++DMYAKCG A +F + ++++ WN +I G GM GH + A QM + G
Sbjct: 312 TALIDMYAKCGSTVEAWVVFQQMR--KKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSG 369
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEA 469
VK + TF +L +C+H GLI +GR+ F +MTKL + P ++HY CMVD+L RAG L EA
Sbjct: 370 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA 429
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH--GEIAANYLFQL---EPEHTGYFVLMSNIYAAS 524
++ MP+P N + GALL C+IH E+A + L QL EP ++G +V++SNIY+
Sbjct: 430 HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNR 489
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
+W + KLR DMK KG++K A S +E+ + F D+ +P ++YKK++ + +E+
Sbjct: 490 GRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 549
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K GY P + DVEDE++EH L +HSEKLA+AF ++ P ++VTKNLRVC+DCH
Sbjct: 550 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCH 609
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A + +S I R+IIVRD NRFH F G+CSCNDYW
Sbjct: 610 TAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 175/367 (47%), Gaps = 6/367 (1%)
Query: 43 HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
H+ ++ Y G + A+ +F+ + + + W +I AY + G E + +
Sbjct: 107 HVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVP--WTALITAYMDAGDLREAVHVARNAF 164
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+G+ +S+T VL ACA + + G+ V + G +V A VD+Y KCG+
Sbjct: 165 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 224
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+VFD+M +D V+W M+ Y P EAL LF Q EG+ D + SA
Sbjct: 225 KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACT 284
Query: 223 QLGDV-LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+LG + L QA+ + FL++ + +++ MYA+CG+ +A +VF M K+D+I WN
Sbjct: 285 RLGALDLGRQAIR-MVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWN 343
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIIN 340
+M+ G G A L +M+ S K N T + L+ +CT+ G Q GR+ FH
Sbjct: 344 AMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKL 403
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
++ ++D+ ++ G L A + +D+ P N L+ G +H + A
Sbjct: 404 YHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM-PMPANAVILGALLGGCKIHRNTELAE 462
Query: 401 EFFSQML 407
Q++
Sbjct: 463 HVLKQLI 469
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/649 (36%), Positives = 362/649 (55%), Gaps = 41/649 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFV--- 116
AR LF+S+ S WN M+ Y +GH E +++ M ++ IS N +V
Sbjct: 114 ARMLFDSMPEKDVVS--WNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSG 171
Query: 117 -------LKACASNSLILEGKVVHGDIIRTGFLSDS---YVQAALVDM---------YAK 157
L S+ ++ + G ++ L D+ + Q + D+ YA+
Sbjct: 172 RLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQ 231
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
G ++F+E VRD+ +WT M+ AY Q +EA +F + Q+ +S +V I
Sbjct: 232 DGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGY 291
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
A K + ++ N +++ Y + G++ +AR +FDMM +RD
Sbjct: 292 AQ--------YKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDS 343
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
+SW +++ GY QNG EA+ + EM+ N T +SAC + + +LG++ HG
Sbjct: 344 VSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQ 403
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
++ + + + NA++ MY KCG +D A ++F + +++ SWN ++AGY HG GR
Sbjct: 404 VVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQ--HKDIVSWNTMLAGYARHGFGR 461
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACM 456
+AL F M+ GVKPD IT +LSACSH GL D G + F M K + P KHYACM
Sbjct: 462 QALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACM 521
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHT 511
+D+LGRAGCL EA ++I+ MP P+ + WGALL A RIHG E AA +F++EP ++
Sbjct: 522 IDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNS 581
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G +VL+SN+YAAS +W +V K+R M+ G++K +S +E I F D +P
Sbjct: 582 GMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKG 641
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
+Y +E + +++K GY+ LHDVE+E+++HML YHSEKLAVAFGI+ + +
Sbjct: 642 RIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPI 701
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+V KNLRVC DCH+A + IS I R IIVRD++R+HHF G CSC DYW
Sbjct: 702 RVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 180/425 (42%), Gaps = 79/425 (18%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ + + G D VFD M +R+ VS+ MI+ Y + K A LF K + L S
Sbjct: 40 ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFS-- 97
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
N ++ YAR + AR++FD
Sbjct: 98 -------------------------------------WNLMLTGYARNRRLRDARMLFDS 120
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M ++D++SWN+ML+GY+++G EA +FD M + N ++ L++A G +
Sbjct: 121 MPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEA 176
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
R+ + S + N +M Y K L A +F+ I R++ SWN +I+GY
Sbjct: 177 RR----LFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQI--PVRDLISWNTMISGYA 230
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
G +A F EE D T+T+++ A G++DE R+ F +M P+ +
Sbjct: 231 QDGDLSQARRLF----EESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM------PQKR 280
Query: 452 HYACMVDMLGRAGCLYEAFDM----IKQMPLPPNDSVWGALLLACRIHGEIA-ANYLFQL 506
+ V + G A Y+ DM ++MP PN W ++ +G++A A LF +
Sbjct: 281 EMSYNVMIAGYAQ--YKRMDMGRELFEEMPF-PNIGSWNIMISGYCQNGDLAQARNLFDM 337
Query: 507 EPEHTGY-FVLMSNIYAASNKWREVGKLREDMKNKG-----------LKKPAAFSVIEYG 554
P+ + + YA + + E + +MK G L A + +E G
Sbjct: 338 MPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELG 397
Query: 555 KDIQG 559
K + G
Sbjct: 398 KQVHG 402
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 178/410 (43%), Gaps = 67/410 (16%)
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
L +S A++ Y + + +FD+M +DL SW +M+T Y + + +A +LF
Sbjct: 61 LRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDS 120
Query: 202 TQQEGLLS---------------------------DSVTIVSVASAVGQLGDVLKAQAVH 234
++ ++S +S++ + +A + G + +A+ +
Sbjct: 121 MPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLF 180
Query: 235 ----------------GYAICNAF-----------LEDLCIQNSIVAMYARCGNVEKARL 267
GY N + DL N++++ YA+ G++ +AR
Sbjct: 181 ESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARR 240
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
+F+ RD+ +W +M+ Y+Q+G EA +FDEM + ++ ++++
Sbjct: 241 LFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP----QKREMSYNVMIAGYAQYKR 296
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
+GR+ + N+ N ++ Y + GDL A N+F D+ P +R+ SW +I
Sbjct: 297 MDMGRELFEEMPFPNI----GSWNIMISGYCQNGDLAQARNLF-DMMP-QRDSVSWAAII 350
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
AGY +G +A+ +M +G + TF LSAC+ ++ G++ + + +
Sbjct: 351 AGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYE 410
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
+V M + GC+ EA+D+ + + D V W +L HG
Sbjct: 411 KGCLVGNALVGMYCKCGCIDEAYDVFQG--VQHKDIVSWNTMLAGYARHG 458
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/640 (37%), Positives = 356/640 (55%), Gaps = 28/640 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGI 106
++ Y G + AR +F+++ S S WN ++ AY +NG E L+ S I
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPEKNSIS--WNGLLAAYVHNGRIEEACLLFESKSDWDLI 205
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
S N FV K ++ L K+ + D+ ++ YA+ G +
Sbjct: 206 SWNCLMGGFVRKKKLGDARWLFDKMP---------VRDAISWNTMISGYAQGGGLSQARR 256
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FDE RD+ +WT M++ Y Q +EA F + ++ +S + I Q
Sbjct: 257 LFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYV----QTKK 312
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ A+ + C ++ N+++ Y + G++ +AR FDMM +RD +SW +++ G
Sbjct: 313 MDIARELFESMPC----RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y Q+G EAL +F E++ N T +S C + + +LG++ HG +
Sbjct: 369 YAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA++ MY KCG +D A + F I E++V SWN ++AGY HG GR+AL F M
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIE--EKDVVSWNTMLAGYARHGFGRQALTVFESM 486
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGC 465
GVKPD IT +LSACSH GL+D G + F MTK V P KHY CM+D+LGRAG
Sbjct: 487 KTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNI 520
L EA D+I+ MP P + WGALL A RIHG E AA +F++EP+++G +VL+SN+
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNL 606
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
YAAS +W + K+R M++ G++K +S +E I F D +P + +Y +E +
Sbjct: 607 YAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEEL 666
Query: 581 AVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVC 640
++++ GY+ LHDVE+E++EHML YHSEKLAVAFGI+ + ++V KNLRVC
Sbjct: 667 DLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVC 726
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCHSA + IS I R II+RD++RFHHF G CSC DYW
Sbjct: 727 EDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 198/443 (44%), Gaps = 44/443 (9%)
Query: 78 WNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKA---CASNSL--ILEGKV 131
WN I + NGHC L +++TM RRS +S N+ ++ + A N + E +
Sbjct: 52 WNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDL 111
Query: 132 VHGDIIRTGFLSDSYVQAA-----------------LVDMYAKCGQTDDGCKVFDEMSVR 174
+++ TG++ + + A L+ YA+ G D+ +VFD M +
Sbjct: 112 FSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK 171
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+ +SW ++ AY + EEA +LF+ L+S + + +LGD
Sbjct: 172 NSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRK-KKLGDAR------ 224
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
+ + D N++++ YA+ G + +AR +FD RD+ +W +M++GY+QNG
Sbjct: 225 -WLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLD 283
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EA FDEM + N V+ +++ + R+ + N+ + N ++
Sbjct: 284 EAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNI----SSWNTMI 335
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
Y + GD+ A F D+ P +R+ SW +IAGY GH +AL F ++ ++G +
Sbjct: 336 TGYGQIGDIAQARKFF-DMMP-QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLN 393
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
TF LS C+ ++ G++ K+ ++ M + G + EA D +
Sbjct: 394 RATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFE 453
Query: 475 QMPLPPNDSV-WGALLLACRIHG 496
+ D V W +L HG
Sbjct: 454 G--IEEKDVVSWNTMLAGYARHG 474
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 121/269 (44%), Gaps = 79/269 (29%)
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
+ GL+D G + F M + SV P KHY CM+D+LGR L E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 486 GALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GALL A RIHG E AA F++ P+++G M++
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRDV 857
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA------GYMPDLS 594
G++K +S W EV K+ + +V + ++ G++ +L
Sbjct: 858 GVQKVPGYS--------------------WFEVQNKIHTFSVGLFLSRERENIGFLEELD 897
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLT---PEAVVQVTKNLRVCNDCHSAFRFIS 651
+ + E+E +E L Y SE LA A GI+ + P V++ K + VC DC SA + +S
Sbjct: 898 LKMREREEE-KERTLKYLSENLAAALGILTIPVGRPNRVMK--KRVYVCEDCRSAIKHMS 954
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I R I +RD++RF+ CSC +YW
Sbjct: 955 KIVGRLITLRDSHRFNE---SICSCGEYW 980
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 41/260 (15%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D+ N ++ + R G+ + A VF+ M +R +S+N+M++GY++N + + A LFD+M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
D V V C +R+L + + D N+++ YA+ G +D
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRL--------FDLMPEKDVVSWNSLLSGYAQNGYVD 159
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ------------------- 405
A +F+++ E+N SWN L+A Y +G +A F
Sbjct: 160 EAREVFDNM--PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRK 217
Query: 406 --------MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
+ ++ D I++ +++S + G + + R+ F + S +V + MV
Sbjct: 218 KKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE----SPTRDVFTWTAMV 273
Query: 458 DMLGRAGCLYEAFDMIKQMP 477
+ G L EA +MP
Sbjct: 274 SGYVQNGMLDEAKTFFDEMP 293
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/614 (36%), Positives = 355/614 (57%), Gaps = 18/614 (2%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N +I++ G + L + S S + T+ ++ C S + +G VH I+
Sbjct: 50 NQLIQSLCKEGKLKQALRVLSQES----SPSQQTYELLILCCGHRSSLSDGLRVHRHILD 105
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G D ++ L+ MY+ G D KVFD+ R + W + A A EE L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 199 FQKTQQEGLLSDSVTIVSVASAV----GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+ K + G+ SD T V A + K + +H + + + I ++V
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVD 225
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNP 312
MYAR G V+ A VF+ M R+++SW++M+ Y +NG+A EAL F EM + D PN
Sbjct: 226 MYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNS 285
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT + ++ AC L + + GR HGYI+ + + +A++ MY +CG LD + +F+
Sbjct: 286 VTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDR 345
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+H +R+V SWN LI+ YG+HG+GRKA++ F +ML G P +TF S+L ACSH GL++
Sbjct: 346 MH--DRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG++ F M + +KP+V+HYACMVD+LGRA L EA M++ M P VWG+LL +
Sbjct: 404 EGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 492 CRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIHG + A+ LF LEP++ G +VL+++IYA + W EV ++++ ++++GL+K
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
+E + + F + D NP ++++ + +A ++K GY+P L+++E E++E
Sbjct: 524 GRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKE 583
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
++ HSEKLA+AFG++N + +++TKNLR+C DCH +FIS ++I+VRD NRF
Sbjct: 584 RIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRF 643
Query: 667 HHFEGGTCSCNDYW 680
H F+ G CSC DYW
Sbjct: 644 HRFKNGVCSCGDYW 657
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 210/400 (52%), Gaps = 15/400 (3%)
Query: 6 PSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
PS + Y+ L+ C +SL ++H + +G +Q L K+I Y+ G + AR
Sbjct: 75 PSQQT-YELLILCCGHRSSLSDGLRVHRHILDNG-SDQDPFLATKLIGMYSDLGSVDYAR 132
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F+ K ++WN + RA GH E L LY M R G+ S+ +T+ +VLKAC +
Sbjct: 133 KVFDKTR--KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 123 NSL----ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
+ + +GK +H + R G+ S Y+ LVDMYA+ G D VF+ M VR++VS
Sbjct: 191 SECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVS 250
Query: 179 WTVMITAYEQAEKPEEALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
W+ MI Y + K EAL F++ T+ + +SVT+VSV A L + + + +HGY
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGY 310
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ L + +++V MY RCG ++ + VFD M RD++SWNS+++ Y +G +A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKA 370
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMD 355
+ +F+EM + P PVT + ++ AC++ G + G++ F + +K ++D
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVD 430
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ + LD A M D+ +E W L+ +HG+
Sbjct: 431 LLGRANRLDEAAKMVQDMR-TEPGPKVWGSLLGSCRIHGN 469
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/570 (37%), Positives = 346/570 (60%), Gaps = 8/570 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L C + +G+ +H I + F D + +++MYAKCG ++ +FD+M +D
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWTV+I+ Y Q+ + EAL LF K G + T+ S+ A G + +H
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+++ + ++ + +S++ MYAR ++ +A+++F+ + ++++SWN+++ G+ + G+
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
+ LF +M +P T V AC GS + G+ H ++I S + A + N ++D
Sbjct: 291 VMRLFXQMLRQGFEPTHFT-YSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAK G + A+ +F + ++++ SWN +I+GY HG G +AL+ F QML+ V+P+
Sbjct: 350 MYAKSGSIKDAKKVFRRL--VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 407
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
ITF S+L+ACSH+GL+DEG+ F M K ++ +V H+ +VD+LGRAG L EA I++
Sbjct: 408 ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 467
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ P +VWGALL ACR+H G AA +F+L+P +G VL+SNIYA++ + +
Sbjct: 468 MPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDA 527
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
K+R+ MK G+KK A S +E ++ F D +P +E+ + E ++ +IK GY+
Sbjct: 528 AKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYV 587
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
PD S L + +DRE L YHSEKLA+AF ++ P +++ KN+R+C DCHSAF+F
Sbjct: 588 PDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHSAFKFA 647
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S + R+IIVRD NRFHHF G CSC DYW
Sbjct: 648 SRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 218/445 (48%), Gaps = 15/445 (3%)
Query: 11 FYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
Y ++L C +L L+Q IH+ + +S + + L I+ Y G A+ LF+
Sbjct: 107 LYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNF-ILNMYAKCGSLEEAQDLFDK 165
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ S W +I Y+ +G E L L+ M G N +T +LKA +
Sbjct: 166 MPTKDMVS--WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDH 223
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +H ++ G+ + +V ++L+DMYA+ + +F+ ++ +++VSW +I +
Sbjct: 224 HGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHA 283
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ + E + LF + ++G T SV A G + + + VH + I +
Sbjct: 284 RKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAY 342
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
I N+++ MYA+ G+++ A+ VF + K+D++SWNS+++GY Q+G +EAL LF++M +
Sbjct: 343 IGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAK 402
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+PN +T L +++AC++ G G+ + + ++ V+D+ + G L+ A
Sbjct: 403 VQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEA- 461
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFTSILSA 424
N F + P + + W L+ MH + G A E ++ P H+ ++I ++
Sbjct: 462 NKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGP-HVLLSNIYAS 520
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPE 449
AG + + K M + VK E
Sbjct: 521 ---AGRLSDAAKVRKMMKESGVKKE 542
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 13/259 (5%)
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L + D + +P +++ CTYL + GR H +I +S + D L N +++M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAKCG L+ A+++F+ + P+ +++ SW VLI+GY G +AL F +ML G +P+
Sbjct: 150 YAKCGSLEEAQDLFDKM-PT-KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEF 207
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
T +S+L A GR+ A K V + ++DM R + EA + +
Sbjct: 208 TLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL 267
Query: 477 PLPPNDSVWGALLL--ACRIHGEIAANYLFQL-----EPEHTGYFVLMSNIYAASNKWRE 529
N W AL+ A + GE Q+ EP H F S + AS+ E
Sbjct: 268 A-AKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTH---FTYSSVLACASSGSLE 323
Query: 530 VGKLREDMKNKGLKKPAAF 548
GK K +P A+
Sbjct: 324 QGKWVHAHVIKSGGQPIAY 342
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/640 (37%), Positives = 356/640 (55%), Gaps = 28/640 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGI 106
++ Y G + AR +F+++ S S WN ++ AY +NG E L+ S I
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPEKNSIS--WNGLLAAYVHNGRIEEACLLFESKSDWDLI 205
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
S N FV K ++ L K+ + D+ ++ YA+ G +
Sbjct: 206 SWNCLMGGFVRKKKLGDARWLFDKMP---------VRDAISWNTMISGYAQGGGLSQARR 256
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FDE RD+ +WT M++ Y Q +EA F + ++ +S + I Q
Sbjct: 257 LFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYV----QTKK 312
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ A+ + C ++ N+++ Y + G++ +AR FDMM +RD +SW +++ G
Sbjct: 313 MDIARELFESMPC----RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y Q+G EAL +F E++ N T +S C + + +LG++ HG +
Sbjct: 369 YAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTG 428
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA++ MY KCG +D A + F I E++V SWN ++AGY HG GR+AL F M
Sbjct: 429 CFVGNALLAMYFKCGSIDEANDTFEGIE--EKDVVSWNTMLAGYARHGFGRQALTVFESM 486
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGC 465
GVKPD IT +LSACSH GL+D G + F MTK V P KHY CM+D+LGRAG
Sbjct: 487 KTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNI 520
L EA D+I+ MP P + WGALL A RIHG E AA +F++EP+++G +VL+SN+
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNL 606
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
YAAS +W + K+R M++ G++K +S +E I F D +P + +Y +E +
Sbjct: 607 YAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEEL 666
Query: 581 AVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVC 640
++++ GY+ LHDVE+E++EHML YHSEKLAVAFGI+ + ++V KNLRVC
Sbjct: 667 DLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVC 726
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCHSA + IS I R II+RD++RFHHF G CSC DYW
Sbjct: 727 EDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 198/443 (44%), Gaps = 44/443 (9%)
Query: 78 WNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKA---CASNSL--ILEGKV 131
WN I + NGHC L +++TM RRS +S N+ ++ + A N + E +
Sbjct: 52 WNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDL 111
Query: 132 VHGDIIRTGFLSDSYVQAA-----------------LVDMYAKCGQTDDGCKVFDEMSVR 174
+++ TG++ + + A L+ YA+ G D+ +VFD M +
Sbjct: 112 FSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK 171
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+ +SW ++ AY + EEA +LF+ L+S + + +LGD
Sbjct: 172 NSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRK-KKLGDAR------ 224
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
+ + D N++++ YA+ G + +AR +FD RD+ +W +M++GY+QNG
Sbjct: 225 -WLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLD 283
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EA FDEM + N V+ +++ + R+ + N+ + N ++
Sbjct: 284 EAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNI----SSWNTMI 335
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
Y + GD+ A F D+ P +R+ SW +IAGY GH +AL F ++ ++G +
Sbjct: 336 TGYGQIGDIAQARKFF-DMMP-QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLN 393
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
TF LS C+ ++ G++ K+ ++ M + G + EA D +
Sbjct: 394 RATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFE 453
Query: 475 QMPLPPNDSV-WGALLLACRIHG 496
+ D V W +L HG
Sbjct: 454 G--IEEKDVVSWNTMLAGYARHG 474
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 41/260 (15%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D+ N ++ + R G+ + A VF+ M +R +S+N+M++GY++N + + A LFD+M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
D V V C +R+L + + D N+++ YA+ G +D
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRL--------FDLMPEKDVVSWNSLLSGYAQNGYVD 159
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ------------------- 405
A +F+++ E+N SWN L+A Y +G +A F
Sbjct: 160 EAREVFDNM--PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRK 217
Query: 406 --------MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
+ ++ D I++ +++S + G + + R+ F + S +V + MV
Sbjct: 218 KKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE----SPTRDVFTWTAMV 273
Query: 458 DMLGRAGCLYEAFDMIKQMP 477
+ G L EA +MP
Sbjct: 274 SGYVQNGMLDEAKTFFDEMP 293
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/679 (34%), Positives = 387/679 (56%), Gaps = 15/679 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y ++K+C L L ++H + SGL + +++G +II Y G +A +F +
Sbjct: 129 YPFVIKACGGLYDLAEGERVHGKVIKSGL-DLDIYIGNSLIIMYAKIGCIESAEMVFREM 187
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WN+MI Y + G +L + M+ SGI + ++ +L AC+ +
Sbjct: 188 PVRDLVS--WNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRN 245
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H ++R+ D VQ +LVDMYAKCG+ D ++FD+++ + +V+W MI Y
Sbjct: 246 GKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSL 305
Query: 189 AEKPEEALILFQKTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ E+ +K Q+ G L D +T++++ QL +L ++VHG+AI N FL L
Sbjct: 306 NAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLV 365
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
++ ++V MY CG ++ A +F M +R+LISWN+M+ Y +NG+ +A+ LF ++ N
Sbjct: 366 LETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKT 425
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
KP+ T ++ A L S + + HGY+ + + + N+++ MY KCG+L A
Sbjct: 426 LKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAR 485
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + + ++V SWN +I Y +HG GR ++E FS+M E+G +P+ TF S+L +CS
Sbjct: 486 EIFDRM--TFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSV 543
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL++EG + F M + ++ P ++HY C++D++GR G L A + I++MPL P +WG
Sbjct: 544 AGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWG 603
Query: 487 ALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
+LL A R G EIAA ++ LE ++TG +VL+SN+YA + +W +V +++ MK +G
Sbjct: 604 SLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEG 663
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
L+K SV++ F DR + VY ++ ++ +I Y+ L+
Sbjct: 664 LEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPSDL 723
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
++ R + HS +LA+ FG+++ T V V KN+R+C CH + IS +R+IIVR
Sbjct: 724 EKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISETTKREIIVR 783
Query: 662 DANRFHHFEGGTCSCNDYW 680
D+ FHHF GG CSC DYW
Sbjct: 784 DSKIFHHFNGGHCSCGDYW 802
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 248/496 (50%), Gaps = 10/496 (2%)
Query: 2 RRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTA 61
R P T D +LK F + S S L+ + + + Y G A
Sbjct: 24 RARTPQTNPDTDLILKPRIF----KTARSKRNQSFLVERNSVSLTRALSSYVERGYMKNA 79
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
LF ++ + +F+WN MIR + +NG + ++ Y M G+ +++T+PFV+KAC
Sbjct: 80 LDLFENMR--QCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACG 137
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
+ EG+ VHG +I++G D Y+ +L+ MYAK G + VF EM VRDLVSW
Sbjct: 138 GLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNS 197
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
MI+ Y +L F++ Q G+ D +++ + A G + + +H + +
Sbjct: 198 MISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSR 257
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
D+ +Q S+V MYA+CG ++ A +FD + + +++WN+M+ GY N Q+ E+
Sbjct: 258 LELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVR 317
Query: 302 EMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+MQ P+ +T + L+ C L + LG+ HG+ I + L A++DMY +C
Sbjct: 318 KMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGEC 377
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G L AE +F ++ ERN+ SWN +IA Y +G RKA+ F + + +KPD T S
Sbjct: 378 GKLKPAECLFGQMN--ERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIAS 435
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
IL A + + E + +TKL + +V M G+ G L A ++ +M
Sbjct: 436 ILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKD 495
Query: 481 NDSVWGALLLACRIHG 496
S W +++A IHG
Sbjct: 496 VIS-WNTVIMAYAIHG 510
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 349/569 (61%), Gaps = 19/569 (3%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T+PFV+KAC +S+ G +VH ++++GF DSY+ +L+ +YA ++F
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
S RD+VSW MI Y + + ++F + ++S + TI++ + VG++ + +
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWN-TIINGYAIVGKIDEAKR-- 118
Query: 232 AVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ + E +L NS+++ + +CGNVE+A +F M RD++SWNSML Y Q
Sbjct: 119 ------LFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQC 172
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+ +EAL LFD+M+ KP T + L+SAC +LG+ G H YI ++ +++++ +
Sbjct: 173 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 232
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++DMYAKCG + A +FN + ++V +WN +IAG +HGH ++A + F +M E
Sbjct: 233 TALVDMYAKCGKISLATQVFNAM--ESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEAS 290
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEA 469
V+P+ ITF ++LSACSHAG++DEG+K M+ ++P+V+HY C++D+L RAG L EA
Sbjct: 291 VEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEA 350
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAAS 524
++I MP+ PN S GALL CRIHG E+ L L+P H+G ++L+SNIYAA+
Sbjct: 351 MELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAA 410
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
KW + K+R MK G+ K SVIE + F D +P ++Y K+ + +
Sbjct: 411 KKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRL 470
Query: 585 KMA-GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
K A GY D L D+E+ED+EH L HSEKLA+A+G+++L + +++ KNLRVC DC
Sbjct: 471 KSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDC 530
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGG 672
H + IS +Y R+IIVRD NRFHHFE G
Sbjct: 531 HHVTKLISKVYGREIIVRDRNRFHHFEDG 559
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 191/403 (47%), Gaps = 46/403 (11%)
Query: 12 YDQLLKSCN-----FLASLRQIHSSLTTSG------LINQALHLGAKIIIKYTTYGEPNT 60
Y ++K+CN + L +H+ + SG ++N +HL Y +
Sbjct: 3 YPFVIKACNESSVTWFGLL--VHTHVVKSGFECDSYIVNSLIHL-------YANGKDLGA 53
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A+ LF S+ +D+ WN MI Y G T ++ M V +
Sbjct: 54 AKQLF-SLCSDRDV-VSWNAMIDGYVKRGEMGHTRMVFDRM--------------VCRDV 97
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM------YAKCGQTDDGCKVFDEMSVR 174
S + I+ G + G I L D + LV + KCG ++ +F EM R
Sbjct: 98 ISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCR 157
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
D+VSW M+ Y Q KP EAL LF + + G+ T+VS+ SA LG + K +H
Sbjct: 158 DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLH 217
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
Y N + + ++V MYA+CG + A VF+ ME +D+++WN+++ G +G
Sbjct: 218 TYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVK 277
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR--NA 352
EA LF EM+ + +PN +T + ++SAC++ G G+K ++S+ I+ + +
Sbjct: 278 EAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLD-CMSSSYGIEPKVEHYDC 336
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
V+D+ A+ G L+ A + + P E N S+ L+ G +HG+
Sbjct: 337 VIDLLARAGLLEEAMELIGTM-PMEPNPSALGALLGGCRIHGN 378
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 18/183 (9%)
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+T ++ AC G H +++ S + D+ + N+++ +YA DL A+ +F+
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 373 IHPSERNVSSWNVLIAGY---GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
S+R+V SWN +I GY G GH R F +M V D I++ +I++ + G
Sbjct: 61 C--SDRDVVSWNAMIDGYVKRGEMGHTRM---VFDRM----VCRDVISWNTIINGYAIVG 111
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
IDE ++ F +M + + + + M+ + G + EAF + +MP D V +
Sbjct: 112 KIDEAKRLFDEMPERN----LVSWNSMLSGFVKCGNVEEAFGLFSEMPC--RDVVSWNSM 165
Query: 490 LAC 492
LAC
Sbjct: 166 LAC 168
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/673 (36%), Positives = 360/673 (53%), Gaps = 76/673 (11%)
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I+ ++ H + ++S M GI +S P V+K CA+ S + GK +H + +G
Sbjct: 46 IQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEM-----------------------------S 172
DS V ++L+ MY + D VFD++
Sbjct: 106 GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ 165
Query: 173 VRDL------VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
RDL VSW MI+ + ++ +A+++FQ EGL D ++ SV AVG L
Sbjct: 166 TRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDM 225
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL--------- 277
L +H Y I D + ++++ MY +C + VF+ M++ D+
Sbjct: 226 PLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTG 285
Query: 278 ------------------------ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
+SW SM+ QNG+ EAL LF EMQ KPN V
Sbjct: 286 LSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSV 345
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T L+ AC + + G+ H + + + + D + +A++DMYAKCG + A + D+
Sbjct: 346 TIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRM-LASRLCFDM 404
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
P+ RN+ SWN L+AGY MHG +A+ F M G KPDH++FT +LSAC+ GL +E
Sbjct: 405 MPN-RNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEE 463
Query: 434 GRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
G F M++ V+ ++HY+CMV +LGR+G L EA+ MIKQMP P+ VWGALL +C
Sbjct: 464 GWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSC 523
Query: 493 RIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+H GEIAA +F+LEP + G ++L+SNIYA+ W EV +R+ M+++GLKK
Sbjct: 524 RVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPG 583
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
+S IE + D +P ++ +K+ + VE+K +GY+P L DVE++D+E
Sbjct: 584 YSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQ 643
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
+L HSEKLAV G++N P +QV KNLR+C DCH+ +FIS +R+I VRD NRFH
Sbjct: 644 ILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFH 703
Query: 668 HFEGGTCSCNDYW 680
F+GG CSC DYW
Sbjct: 704 QFKGGVCSCGDYW 716
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/778 (31%), Positives = 384/778 (49%), Gaps = 111/778 (14%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTY----GEPNTARSL 64
Y +LL+ C A+ R IH+ +GL+ A +L ++ Y G AR L
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASA-YLCNNLLSYYGETAGGAGGLRDARRL 87
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR--------------------- 103
F+ I + F WN+++ +A +G + +++ M
Sbjct: 88 FDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGE 147
Query: 104 ----------SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVD 153
G + +T VL +CA G+ VH +++ G S V ++++
Sbjct: 148 AIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLN 207
Query: 154 MYAKCGQTDDGCKVFDEMSVRD-------------------------------LVSWTVM 182
MY KCG ++ VF+ M VR +VSW M
Sbjct: 208 MYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAM 267
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
I Y Q +AL LF + E ++ D TI SV SA LG+V + VH Y +
Sbjct: 268 IAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTE 327
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFD------------------------------- 270
+ + N++++ YA+ G+VE AR + D
Sbjct: 328 MAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREM 387
Query: 271 --MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
+M RD+++W +M+ GY QNG+ EA+ LF M +PN T ++S C L
Sbjct: 388 FGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACL 447
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
G++ H I S ++ +++ NA++ MYA+ G A MF+ + + ++ W +I
Sbjct: 448 DYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIV 506
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVK 447
HG G +A+ F +ML GV+PD IT+ +LSACSHAG ++EG++ + + + +
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANY 502
PE+ HYACMVD+L RAG EA + I++MP+ P+ WG+LL ACR+H E+AA
Sbjct: 567 PEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK 626
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
L ++P ++G + ++N+Y+A +W + ++ + K K ++K FS I F
Sbjct: 627 LLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGA 686
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
D V+P VY M EIK AG++PDL LHDV+DE +E +L+ HSEKLA+AFG+
Sbjct: 687 DDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGL 746
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ + ++V KNLRVCNDCH+A + IS + R+IIVRDA RFHHF G CSC DYW
Sbjct: 747 ISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/570 (35%), Positives = 341/570 (59%), Gaps = 7/570 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
++ ACA + + +H + R+ D+++ +L+ MY KCG D VFD+M RD
Sbjct: 66 IIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRD 125
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWT +I Y Q P EA+ L + + T S+ A G G + +H
Sbjct: 126 VVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHA 185
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
A+ + ED+ + ++++ MYARC ++ A +VFD + ++ +SWN+++ G+ +
Sbjct: 186 LAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGET 245
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
L+ F EMQ + T + SA +G+ + GR H ++I S K+ A + N ++
Sbjct: 246 TLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLG 305
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAK G + A +F+ + +R++ +WN ++ +G G++A+ F ++ + G++ +
Sbjct: 306 MYAKSGSMVDARKVFDRM--DKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQ 363
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
ITF S+L+ACSH GL+ EG+ F M +V+PE+ HY VD+LGRAG L EA + +
Sbjct: 364 ITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFK 423
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ P +VWGALL ACR+H G+ AA+++F+L+P+ TG VL+ NIYA++ KW +
Sbjct: 424 MPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDA 483
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
++R+ MK G+KK A S ++ + F D +P ++Y+ E + + IK AGY+
Sbjct: 484 ARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYV 543
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P+ + L + +++RE L YHSEK+A+AF ++N+ A +++ KN+R+C DCHSAF+++
Sbjct: 544 PNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYV 603
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S +++R+I+VRD NRFHHF G+CSC DYW
Sbjct: 604 SKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 199/397 (50%), Gaps = 8/397 (2%)
Query: 4 LGPSTEGFYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
L P T Y ++ +C LA R IH+ L+ S L A L + +I Y G +
Sbjct: 56 LAP-TPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNS-LIHMYCKCGAVSD 113
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR +F+ + + S W +I YA N E + L M R+ N +TF +LKA
Sbjct: 114 ARHVFDKMPSRDVVS--WTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKAT 171
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ G+ +H ++ + D YV +AL+DMYA+C Q D VFD + ++ VSW
Sbjct: 172 GACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWN 231
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I + + E L+ F + Q+ G + T S+ SA ++G + + + VH + I +
Sbjct: 232 ALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKS 291
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ N+++ MYA+ G++ AR VFD M+KRDL++WN+MLT Q G EA+ F
Sbjct: 292 GQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHF 351
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+E++ + N +T L +++AC++ G + G+ + + + N++ + + +D+ +
Sbjct: 352 EEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRA 411
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
G L A +F P E + W L+ MH + +
Sbjct: 412 GLLKEAL-IFVFKMPMEPTAAVWGALLGACRMHKNAK 447
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 3/197 (1%)
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
+S L D + + P P +++AC + R H ++ S + DA L N+
Sbjct: 41 SSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNS 100
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++ MY KCG + A ++F+ + PS R+V SW LIAGY + +A+ ML +
Sbjct: 101 LIHMYCKCGAVSDARHVFDKM-PS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFR 158
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
P+ TFTS+L A G G + A K + +V + ++DM R + A M
Sbjct: 159 PNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAI-M 217
Query: 473 IKQMPLPPNDSVWGALL 489
+ + N+ W AL+
Sbjct: 218 VFDRLVSKNEVSWNALI 234
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/717 (33%), Positives = 386/717 (53%), Gaps = 51/717 (7%)
Query: 6 PSTEGFYDQLLK---SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
PS + LL S L R++ ++ L+ G ++ G
Sbjct: 43 PSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVT-----GNSLLSALARAGLVRDME 97
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR--SGISSNSYTFPFVLKAC 120
LF S+ + S+ N ++ ++ G Y + R +G+ + T V+
Sbjct: 98 RLFTSLPQRDAVSY--NALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVA 155
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS-------- 172
++ G+ VH I+R GF + ++ + LVDMYAK G D +VFDEM
Sbjct: 156 SALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCN 215
Query: 173 -----------------------VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
RD ++WT M+T Q EAL +F++ + EG+
Sbjct: 216 TMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGI 275
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D T S+ +A G L + + + +H Y + +++ + +++V MY++C +V A VF
Sbjct: 276 DQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVF 335
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
M +++ISW +M+ GY QNG EA+ +F EMQ KP+ T ++S+C L S +
Sbjct: 336 RRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLE 395
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G +FH + S ++ T+ NA++ +Y KCG ++ A +F+++ S + SW L+ G
Sbjct: 396 EGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM--SFHDQVSWTALVMG 453
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKP 448
Y G ++ ++ F +ML +GVKPD +TF +LSACS +GL+D+GR F M + + P
Sbjct: 454 YAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVP 513
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYL 503
HY CM+D+ R+G L +A + IKQMP P+ W LL ACR+ G++ AA L
Sbjct: 514 LDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENL 573
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA 563
+L+P++ +VL+ +++A+ +W +V KLR M+++ +KK S I+Y + F
Sbjct: 574 LKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSAD 633
Query: 564 DRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIM 623
D+ +P+ + +Y+K++ + ++ GY PD+S LHDV D ++ HML++HSEKLA+AFG++
Sbjct: 634 DQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLI 693
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ PE +++ KNLRVC DCH+A +FIS I R I+VRDA RFH F G CSC D+W
Sbjct: 694 FVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/565 (39%), Positives = 347/565 (61%), Gaps = 16/565 (2%)
Query: 129 GKVVHGDIIRTG-FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +H +R+G F SD+Y +AL+ MY C + D + FDE+ + V T M +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 188 QAEKPEEALILFQKTQQEGL--LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+ L +F+ G + D + SA ++ D +H
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQ 226
Query: 246 LCIQNSIVAMYARCG--NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ N+I+ YA+ G ++ AR +FDMM+ RD++SWN+M+ Y QNG ++EAL L+ +M
Sbjct: 227 TGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALGLYSKM 285
Query: 304 Q--NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
D + N VT ++ AC + G+ Q G++ H ++ ++ + + +V+DMY+KCG
Sbjct: 286 LIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCG 345
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
++ A F I +N+ SW+ +IAGYGMHG+G++AL F+ M + G+KP++ITF ++
Sbjct: 346 KVEMAWKAFQKI--KGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITV 403
Query: 422 LSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L+ACSHAGL+ EGR + M T+ ++P V+HY CMVD+LGRAGCL EA+ +IK+M + P
Sbjct: 404 LAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKP 463
Query: 481 NDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ ++WGALL ACRI+ +I A LF+L+ ++GY+VL+SNIYA + W+EV ++R
Sbjct: 464 DAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRV 523
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
+K +G++KP +S +E F+ D+ +P +KE+Y +E + I AGY+P+
Sbjct: 524 LVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGS 583
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
LHD++ E+RE ML HSEKLAVAF +MN +V+ V KNLRVC DCH+A + I+ +
Sbjct: 584 VLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTG 643
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R+II+RD RFHHF+ G CSC DYW
Sbjct: 644 REIIIRDLKRFHHFKDGLCSCGDYW 668
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 173/373 (46%), Gaps = 17/373 (4%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H SGL + + ++ Y P AR F+ I + M
Sbjct: 108 RQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPN--PVIVTAMASGC 165
Query: 86 ANNGHCVETLELYSTMRRSG----ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
N TL ++ +M SG + + A + I G +H + + G
Sbjct: 166 MRNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGG--IHALVSKIGL 223
Query: 142 LSDSYVQAALVDMYAKCGQTDDGC--KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
+ V ++D YAK G D G K+FD M RD+VSW MI Y Q EAL L+
Sbjct: 224 DGQTGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLSTEALGLY 282
Query: 200 QKTQQEG--LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
K G + ++VT+ +V A G + + +H + +++ + S+V MY+
Sbjct: 283 SKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYS 342
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG VE A F ++ ++++SW++M+ GY +G EAL +F +M+ S KPN +T +
Sbjct: 343 KCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFIT 402
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHP 375
+++AC++ G GR ++ + + I+ + + ++D+ + G LD A + ++
Sbjct: 403 VLAACSHAGLLSEGRYWYN-TMKTEFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMK- 460
Query: 376 SERNVSSWNVLIA 388
+ + + W L++
Sbjct: 461 VKPDAALWGALLS 473
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 334/576 (57%), Gaps = 9/576 (1%)
Query: 112 TFPFVLKACASNSLILE-GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
T P LK+ + L G+ +H ++ ++ +V +L+ +YAKCG +VFDE
Sbjct: 551 TIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDE 610
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M V WT +ITAY A EA+ + + G+ DS T V V +A ++ D+
Sbjct: 611 MPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG 670
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ V A + + + + V +Y +CG + KAR VFD M +D ++W +M+ GY N
Sbjct: 671 ETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASN 730
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G EAL LF MQ KP+ +SACT LG+ LGR+ + + L
Sbjct: 731 GHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 790
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++DMYAKCG A +F + ++++ WN +I G GM GH + A QM + G
Sbjct: 791 TALIDMYAKCGSTVEAWVVFQQMR--KKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSG 848
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEA 469
VK + TF +L +C+H GLI +GR+ F +MTKL + P ++HY CMVD+L RAG L EA
Sbjct: 849 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA 908
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH--GEIAANYLFQL---EPEHTGYFVLMSNIYAAS 524
++ MP+P N + GALL C+IH E+A + L QL EP ++G +V++SNIY+
Sbjct: 909 HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNR 968
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
+W + KLR DMK KG++K A S +E+ + F D+ +P ++YKK++ + +E+
Sbjct: 969 GRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 1028
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K GY P + DVEDE++EH L +HSEKLA+AF ++ P ++VTKNLRVC+DCH
Sbjct: 1029 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCH 1088
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A + +S I R+IIVRD NRFH F G+CSCNDYW
Sbjct: 1089 TAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 8/385 (2%)
Query: 43 HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
H+ ++ Y G + A+ +F+ + + + W +I AY + G E + +
Sbjct: 586 HVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVP--WTALITAYMDAGDLREAVHVARNAF 643
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+G+ +S+T VL ACA + + G+ V + G +V A VD+Y KCG+
Sbjct: 644 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 703
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+VFD+M +D V+W M+ Y P EAL LF Q EG+ D + SA
Sbjct: 704 KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACT 763
Query: 223 QLGDV-LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+LG + L QA+ + FL++ + +++ MYA+CG+ +A +VF M K+D+I WN
Sbjct: 764 RLGALDLGRQAIR-MVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWN 822
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIIN 340
+M+ G G A L +M+ S K N T + L+ +CT+ G Q GR+ FH
Sbjct: 823 AMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKL 882
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
++ ++D+ ++ G L A + +D+ P N L+ G +H + A
Sbjct: 883 YHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM-PMPANAVILGALLGGCKIHRNTELAE 941
Query: 401 EFFSQ--MLEEGVKPDHITFTSILS 423
Q +LE +++ ++I S
Sbjct: 942 HVLKQLILLEPWNSGNYVMLSNIYS 966
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 334/576 (57%), Gaps = 9/576 (1%)
Query: 112 TFPFVLKACASNSLILE-GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
T P LK+ + L G+ +H ++ ++ +V +L+ +YAKCG +VFDE
Sbjct: 527 TIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDE 586
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M V WT +ITAY A EA+ + + G+ DS T V V +A ++ D+
Sbjct: 587 MPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATG 646
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ V A + + + + V +Y +CG + KAR VFD M +D ++W +M+ GY N
Sbjct: 647 ETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASN 706
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G EAL LF MQ KP+ +SACT LG+ LGR+ + + L
Sbjct: 707 GHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLG 766
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++DMYAKCG A +F + ++++ WN +I G GM GH + A QM + G
Sbjct: 767 TALIDMYAKCGSTVEAWVVFQQMR--KKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSG 824
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEA 469
VK + TF +L +C+H GLI +GR+ F +MTKL + P ++HY CMVD+L RAG L EA
Sbjct: 825 VKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA 884
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH--GEIAANYLFQL---EPEHTGYFVLMSNIYAAS 524
++ MP+P N + GALL C+IH E+A + L QL EP ++G +V++SNIY+
Sbjct: 885 HQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNR 944
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
+W + KLR DMK KG++K A S +E+ + F D+ +P ++YKK++ + +E+
Sbjct: 945 GRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEM 1004
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K GY P + DVEDE++EH L +HSEKLA+AF ++ P ++VTKNLRVC+DCH
Sbjct: 1005 KTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCH 1064
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A + +S I R+IIVRD NRFH F G+CSCNDYW
Sbjct: 1065 TAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 8/385 (2%)
Query: 43 HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
H+ ++ Y G + A+ +F+ + + + W +I AY + G E + +
Sbjct: 562 HVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVP--WTALITAYMDAGDLREAVHVARNAF 619
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+G+ +S+T VL ACA + + G+ V + G +V A VD+Y KCG+
Sbjct: 620 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 679
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+VFD+M +D V+W M+ Y P EAL LF Q EG+ D + SA
Sbjct: 680 KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACT 739
Query: 223 QLGDV-LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+LG + L QA+ + FL++ + +++ MYA+CG+ +A +VF M K+D+I WN
Sbjct: 740 RLGALDLGRQAIR-MVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWN 798
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIIN 340
+M+ G G A L +M+ S K N T + L+ +CT+ G Q GR+ FH
Sbjct: 799 AMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKL 858
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
++ ++D+ ++ G L A + +D+ P N L+ G +H + A
Sbjct: 859 YHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDM-PMPANAVILGALLGGCKIHRNTELAE 917
Query: 401 EFFSQ--MLEEGVKPDHITFTSILS 423
Q +LE +++ ++I S
Sbjct: 918 HVLKQLILLEPWNSGNYVMLSNIYS 942
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/704 (32%), Positives = 368/704 (52%), Gaps = 74/704 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
I+ Y G+ A +F+ I S S W T+I Y G + ++++ M + +
Sbjct: 47 ILSGYAKQGKLEKAHQVFDLIPVRDSVS--WTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK---------- 157
+T VL +CA+ GK VH +++ G + V +L++MYAK
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164
Query: 158 ---------------------CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
CG+ D F+ +S RD+VSW MI Q EAL
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEAL 224
Query: 197 ILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
F ++ L D ++ S SA L + + +HGY + F + N++++M
Sbjct: 225 QFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM 284
Query: 256 YARCGNVE---------------------------------KARLVFDMMEKRDLISWNS 282
YA+ G VE AR +F+ ++ D+++W +
Sbjct: 285 YAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTA 344
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ GY+QNG ++A+ +F M + +PN T ++SA + + S G++ H I S
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG 404
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ ++ NA+ MYAK G ++ A +FN + R+ SW +I HG G +A+E
Sbjct: 405 EALSPSVGNALTTMYAKAGSINGARKVFNLLR-QNRDTVSWTSMIMALAQHGLGEEAIEL 463
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLG 461
F QML G+KPDHIT+ +LSAC+H GL+++GR F M + + P + HYACMVD+ G
Sbjct: 464 FEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFG 523
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA+ ++ MP+ P+ WG+LL +C+++ ++AA L +EP ++G +
Sbjct: 524 RAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSA 583
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
++N+Y++ KW + K+R+ MK +G+KK S ++ F D ++P E+YK
Sbjct: 584 LANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKM 643
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
++ + EIK G+ PD LHD+E E ++ +L YHSEKLA+AFGI++ +++ KN
Sbjct: 644 MDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKN 703
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LRVCNDCH+A +FIS + R+IIVRDA RFHHF+ G+CSC DYW
Sbjct: 704 LRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 213/490 (43%), Gaps = 113/490 (23%)
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR--------------------- 174
+++ G Y+ L+++YAK G D +F+EM V+
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 175 ----------DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
D VSWT +I Y Q + E+A+ +F ++ +L T+ +V ++
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME----------- 273
G + VH + + + + NS++ MYA+ G+++ A++VFD M+
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180
Query: 274 --------------------KRDLISWNSMLTGYIQNGQASEALLLFDE-MQNSDCKPNP 312
+RD++SWNSM+ G Q+G +EAL F ++++ KP+
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDR 240
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM--- 369
+ +SAC L G++ HGYI+ + + NA++ MYAK G ++ A +
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Query: 370 --------------------FNDIHPSER--------NVSSWNVLIAGYGMHGHGRKALE 401
DI P+ + +V +W +I GY +G A+E
Sbjct: 301 SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIE 360
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL--SVKPEVKHYACMVDM 459
F M+ EG +P+ T ++LSA S ++ G++ A + ++ P V + + M
Sbjct: 361 VFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN--ALTTM 418
Query: 460 LGRAGCLYEA---FDMIKQMPLPPNDSV-WGALLLACRIH--GEIAANYLFQL-----EP 508
+AG + A F++++Q D+V W ++++A H GE A Q+ +P
Sbjct: 419 YAKAGSINGARKVFNLLRQ----NRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKP 474
Query: 509 EHTGYFVLMS 518
+H Y ++S
Sbjct: 475 DHITYVGVLS 484
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/778 (31%), Positives = 383/778 (49%), Gaps = 111/778 (14%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTY----GEPNTARSL 64
Y +LL+ C A+ R IH+ +GL+ A +L ++ Y G AR L
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASA-YLCNNLLSYYGETAGGAGGLRDARRL 87
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR--------------------- 103
F+ I + F WN+++ +A +G + +++ M
Sbjct: 88 FDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGE 147
Query: 104 ----------SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVD 153
G + +T VL +CA G+ VH +++ G S V ++++
Sbjct: 148 AIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLN 207
Query: 154 MYAKCGQTDDGCKVFDEMSVRD-------------------------------LVSWTVM 182
MY KCG + VF+ M VR +VSW M
Sbjct: 208 MYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAM 267
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
I Y Q +AL LF + E ++ D TI SV SA LG+V + VH Y +
Sbjct: 268 IAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTE 327
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFD------------------------------- 270
+ + N++++ YA+ G+VE AR + D
Sbjct: 328 MAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREM 387
Query: 271 --MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
+M RD+++W +M+ GY QNG+ EA+ LF M +PN T ++S C L
Sbjct: 388 FGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACL 447
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
G++ H I S ++ +++ NA++ MYA+ G A MF+ + + ++ W +I
Sbjct: 448 DYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIV 506
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVK 447
HG G +A+ F +ML GV+PD IT+ +LSACSHAG ++EG++ + + + +
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANY 502
PE+ HYACMVD+L RAG EA + I++MP+ P+ WG+LL ACR+H E+AA
Sbjct: 567 PEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK 626
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
L ++P ++G + ++N+Y+A +W + ++ + K K ++K FS I F
Sbjct: 627 LLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGA 686
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
D V+P VY M EIK AG++PDL LHDV+DE +E +L+ HSEKLA+AFG+
Sbjct: 687 DDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGL 746
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ + ++V KNLRVCNDCH+A + IS + R+IIVRDA RFHHF G CSC DYW
Sbjct: 747 ISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/675 (34%), Positives = 374/675 (55%), Gaps = 58/675 (8%)
Query: 17 KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP-----NTARSLFNSIHND 71
KS L L+Q+H+ +G H + ++K Y P N A +F + N
Sbjct: 38 KSSTSLHHLKQVHAVALRTGHFQD--HYVSGTLVK--CYANPHFSNLNFALKVFEYVPNP 93
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
F++N +I+ N + + Y M + N +T+P + KAC + EG
Sbjct: 94 NV--FVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQ 151
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH +I+ G D ++++A + MY G+ + ++ E D++ + MI Y + +
Sbjct: 152 VHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGE 211
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E A LF + + + S N
Sbjct: 212 VEAAKELFWSMEDKNVGS---------------------------------------WNV 232
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V+ A+CG +E+AR +F+ M++++ ISW++M+ GYI+ G EAL +F+ MQ + +P
Sbjct: 233 MVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPR 292
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+++AC LG+ GR H Y+ N++ DA L A++DMYAKCG LD A ++F
Sbjct: 293 KFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFE 352
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ E V +WN +I G GMHG A+E F +M ++ +P+ IT +LSAC+H+G++
Sbjct: 353 KMEKKE--VFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMV 410
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
DEG + F M ++ ++P ++HY C+VD+LGRAG L EA +++ MP+ P+ +VWGALL
Sbjct: 411 DEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLG 470
Query: 491 ACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACR HG++ L +LEP+++G + L+SNIYA + +W +V +R+ MK +G+K
Sbjct: 471 ACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTS 530
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S+I++ + F D +P K +Y +++M +KM G+ P+ S L D+E+E++
Sbjct: 531 TGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEK 590
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E L YHSEKLA+AFG++N P + V KNLR+C DCHSAF+ IS +Y R+IIVRD R
Sbjct: 591 EAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRAR 650
Query: 666 FHHFEGGTCSCNDYW 680
+HHF+ GTCSC D+W
Sbjct: 651 YHHFKTGTCSCKDFW 665
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/637 (35%), Positives = 351/637 (55%), Gaps = 12/637 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ G R F+ + S WN +I AY N + M GI+
Sbjct: 5 YSQIGNIPAVRKAFDEMPVADIVS--WNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEV 62
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
L AC I G+ + I+ TG +S VQ ALV MY K G D VF M
Sbjct: 63 GISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRM 122
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
S RD+V+W+ M+ AY + P EAL LF++ +G+ + VT+VS A LGD+
Sbjct: 123 SHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGA 182
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+H + + ++V +Y +CG +E A F + ++++++W+++ Y +N
Sbjct: 183 LMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARND 242
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH--GYIINSNMKIDATL 349
+ +A+ + M PN T + ++ AC + + + GR+ H ++ ++ D +
Sbjct: 243 RNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYV 302
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
A+++MY+KCG+L A +MF+ I + ++ WN LIA HG KALE F +M E
Sbjct: 303 LTALVNMYSKCGNLALAGDMFDKI--AHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDMLGRAGCLYE 468
G++P ITFTS+L ACSHAG++D+GRK F + + PE +H+ CMVD+LGRAG + +
Sbjct: 361 GLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVD 420
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAA 523
+ D++ MP P+ W A L ACR + + AA LFQL+P +VL+SN+YA
Sbjct: 421 SEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAK 480
Query: 524 SNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE 583
+ +W +V ++R+ M+ K A S IE + F + D +P E++ +++ +
Sbjct: 481 AGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKL 540
Query: 584 IKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
+K AGY+PD LHDV+ E +E M+ YHSEKLA+AF ++ + ++V KNLRVCNDC
Sbjct: 541 MKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDC 600
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
H+A +FIS + R+I+VRD NRFH F+ G CSC DYW
Sbjct: 601 HTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 167/352 (47%), Gaps = 11/352 (3%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
++ Y++ G K FDEM V D+VSW +I AY + + F+ +G+
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
V I SA ++ +++ + E+ +Q ++V+MY + G+ A VF
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M RD+++W++M+ Y +NG EAL LF +M PN VT + + AC LG +
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G H + ++ + A++++Y KCG ++ A F I E+NV +W+ + A Y
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI--VEKNVVAWSAISAAY 238
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL--SVKP 448
+ R A+ +M EG+ P+ TF S+L AC+ + +GR+ L ++
Sbjct: 239 ARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLES 298
Query: 449 EVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGE 497
+V +V+M + G L A FD I + L +W +L+ HG+
Sbjct: 299 DVYVLTALVNMYSKCGNLALAGDMFDKIAHLDL----VLWNSLIATNAQHGQ 346
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLRQ---IHS-SLTTSGLINQALHLGAKIIIKYTTYGEPN 59
L P++ F +L +C +A+L+Q IH + G + +++ ++ Y+ G
Sbjct: 259 LVPNSTTFV-SVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLA 317
Query: 60 TARSLFNSI-HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
A +F+ I H D LWN++I A +G + LEL+ MR G+ TF VL
Sbjct: 318 LAGDMFDKIAHLDL---VLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLF 374
Query: 119 ACASNSLILEGK 130
AC+ ++ +G+
Sbjct: 375 ACSHAGMLDQGR 386
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/579 (37%), Positives = 337/579 (58%), Gaps = 9/579 (1%)
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
SN Y + +L++C S + GK +H + + G + + LV+ Y+ C + +
Sbjct: 56 SNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHL 115
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
FD++ +L W V+I AY E A+ L+ + + GL D+ T+ V A L +
Sbjct: 116 FDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTI 175
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ + +H I + + D+ + ++V MYA+CG V AR VFD + RD + WNSML Y
Sbjct: 176 GEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAY 235
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
QNG E+L L EM +P T + ++S+ + GR+ HG+ + +
Sbjct: 236 AQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYND 295
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
++ A++DMYAKCG + A +F + E+ V SWN +I GY MHG +AL+ F +M+
Sbjct: 296 KVKTALIDMYAKCGSVKVACVLFERLR--EKRVVSWNAIITGYAMHGLAVEALDLFERMM 353
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCL 466
+E +PDHITF L+ACS L+DEGR + M + + P V+HY CMVD+LG G L
Sbjct: 354 KEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQL 412
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIY 521
EA+D+I+QM + P+ VWGALL +C+ HG E+A L +LEP+ +G +V+++N+Y
Sbjct: 413 DEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMY 472
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A S KW V +LR+ M +KG+KK A S IE + F + D +P +Y +++ +
Sbjct: 473 AQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLE 532
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
++ AGY+PD HDVE++++ M+ HSE+LA+AFG+++ P + +TKNLR+C
Sbjct: 533 GLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICE 592
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH A +FIS I R+I VRD NR+HHF G CSC DYW
Sbjct: 593 DCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 230/416 (55%), Gaps = 17/416 (4%)
Query: 6 PSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
PS +Y LL+SC +L +Q+H+ L G I L L K++ Y+ A
Sbjct: 55 PSNHYYYASLLESCISAKALEPGKQLHARLCQLG-IAYNLDLATKLVNFYSVCNSLRNAH 113
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
LF+ I K FLWN +IRAYA NG + LY M G+ +++T PFVLKAC++
Sbjct: 114 HLFDKI--PKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSA 171
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
S I EG+V+H +IR+G+ D +V AALVDMYAKCG D VFD++ RD V W M
Sbjct: 172 LSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSM 231
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
+ AY Q P+E+L L + +G+ T+V+V S+ + + + +HG+ + F
Sbjct: 232 LAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGF 291
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+ ++ +++ MYA+CG+V+ A ++F+ + ++ ++SWN+++TGY +G A EAL LF+
Sbjct: 292 QYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFER 351
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKC 360
M + +P+ +T + ++AC+ GR + ++ + +I+ T+ + ++D+ C
Sbjct: 352 MMK-EAQPDHITFVGALAACSRGRLLDEGRALYNLMVR-DCRINPTVEHYTCMVDLLGHC 409
Query: 361 GDLDTAENMFN--DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
G LD A ++ D+ P + W L+ HG+ A +++E ++PD
Sbjct: 410 GQLDEAYDLIRQMDVMP---DSGVWGALLNSCKTHGNVELAEVALEKLIE--LEPD 460
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/681 (34%), Positives = 379/681 (55%), Gaps = 17/681 (2%)
Query: 12 YDQLLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNS 67
+ LL CN ++ Q+H+ G + +++K Y + A LF
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I S +F NT+I Y +G E++ L+ MR+SG + +TF VLKA
Sbjct: 210 IPEKDSVTF--NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA 267
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +H + TGF D+ V ++D Y+K + + +FDEM D VS+ V+I++Y
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
QA++ E +L F++ Q G + ++ S L + + +H A+ L
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ NS+V MYA+C E+A L+F + +R +SW ++++GY+Q G L LF +M+ S+
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+ + T ++ A S LG++ H +II S + + ++DMYAKCG + A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F ++ +RN SWN LI+ + +G G A+ F++M+E G++PD ++ +L+ACSH
Sbjct: 508 QVFEEM--PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 428 AGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
G +++G + F M+ + + P+ KHYACM+D+LGR G EA ++ +MP P++ +W
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 487 ALLLACRIH-----GEIAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
++L ACRIH E AA LF +E +V MSNIYAA+ +W +V +++ M+ +
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK A+S +E I F + D+ +P E+ +K+ + EI+ GY PD S + DV
Sbjct: 686 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDV 745
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKII 659
+++ + L YHSE+LAVAF +++ TPE + V KNLR C DCH+A + IS I +R+I
Sbjct: 746 DEQMKIESLKYHSERLAVAFALIS-TPEGCPIVVMKNLRACRDCHAAIKLISKIVKREIT 804
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRD +RFHHF G CSC DYW
Sbjct: 805 VRDTSRFHHFSEGVCSCGDYW 825
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 226/461 (49%), Gaps = 23/461 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I + G+ ++AR LF+++ + + W ++ YA N H E +L+ M RS
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVT--WTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 108 S--NSYTFPFVLKACASNSLILEGKV--VHGDIIRTGFLSDSY--VQAALVDMYAKCGQT 161
+ + TF +L C N + + V VH ++ GF ++ + V L+ Y + +
Sbjct: 143 TLPDHVTFTTLLPGC--NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
D C +F+E+ +D V++ +IT YE+ E++ LF K +Q G T V AV
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L D Q +H ++ F D + N I+ Y++ V + R++FD M + D +S+N
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 282 SMLTGYIQNGQASEALLLFDEMQ--NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
+++ Y Q Q +L F EMQ D + P ++ ++A L S Q+GR+ H +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAA--NLSSLQMGRQLHCQAL 378
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY---GMHGHG 396
+ + N+++DMYAKC + AE +F + +R SW LI+GY G+HG G
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSL--PQRTTVSWTALISGYVQKGLHGAG 436
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACM 456
L+ F++M ++ D TF ++L A + + G++ A + + V + +
Sbjct: 437 ---LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL 493
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
VDM + G + +A + ++MP N W AL+ A +G+
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGD 533
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 182/404 (45%), Gaps = 40/404 (9%)
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM---------- 171
S + L+ + V II+TGF +D+ +V+ + GQ KV+DEM
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 172 ------------SVRDL---------VSWTVMITAYEQAEKPEEALILFQKTQQEG--LL 208
S RDL V+WT+++ Y + +EA LF++ + L
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED--LCIQNSIVAMYARCGNVEKAR 266
D VT ++ VH +A+ F + L + N ++ Y ++ A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
++F+ + ++D +++N+++TGY ++G +E++ LF +M+ S +P+ T ++ A L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
LG++ H + + DA++ N ++D Y+K + +F+++ E + S+NV+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM--PELDFVSYNVV 322
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I+ Y +L FF +M G + F ++LS ++ + GR+ L+
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LAT 381
Query: 447 KPEVKHYA-CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ H +VDM + EA + K +P S W AL+
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALI 424
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/693 (34%), Positives = 383/693 (55%), Gaps = 44/693 (6%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
QIH + G + L + ++ Y GE ++AR +F+ + S W +MI YA
Sbjct: 155 QIHGLIVKMGYA-KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS--WTSMICGYA 211
Query: 87 NNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ ++L+ M R ++ NS T V+ ACA + G+ V+ I +G +
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ +ALVDMY KC D ++FDE +L M + Y + EAL +F
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ D ++++S S+ QL ++L ++ HGY + N F I N+++ MY +C + A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQA-------------------------------S 294
+FD M + +++WNS++ GY++NG+
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 295 EALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EA+ +F MQ+ + + VT + + SAC +LG+ L + + YI + +++D L +
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+DM+++CGD ++A ++FN + + R+VS+W I M G+ +A+E F M+E+G+KP
Sbjct: 512 VDMFSRCGDPESAMSIFNSL--TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKP 569
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDM 472
D + F L+ACSH GL+ +G++ F M KL V PE HY CMVD+LGRAG L EA +
Sbjct: 570 DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Query: 473 IKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKW 527
I+ MP+ PND +W +LL ACR+ G + AA + L PE TG +VL+SN+YA++ +W
Sbjct: 630 IEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRW 689
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
++ K+R MK KGL+KP S I+ F + D +P + ++ ++
Sbjct: 690 NDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL 749
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
G++PDLS L DV+++++ ML+ HSEKLA+A+G+++ +++ KNLRVC+DCHS
Sbjct: 750 GHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFA 809
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+F S +Y R+II+RD NRFH+ G CSC D+W
Sbjct: 810 KFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 257/486 (52%), Gaps = 42/486 (8%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
LK+C + L+ H SLT GL N + K++ + G + N +SY
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTI-TKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 76 --FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F++N++IR YA++G C E + L+ M SGIS + YTFPF L ACA + G +H
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G I++ G+ D +VQ +LV YA+CG+ D KVFDEMS R++VSWT MI Y + + +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 194 EAL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQN 250
+A+ + F+ + E + +SVT+V V SA +L D+ + V+ + I N+ +E DL + +
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMV-S 275
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MY +C ++ A+ +FD +L N+M + Y++ G EAL +F+ M +S +P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ ++ L +S+C+ L + G+ HGY++ + + + NA++DMY KC DTA +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE---------------------- 408
+ + S + V +WN ++AGY +G A E F M E
Sbjct: 396 DRM--SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 409 ----------EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
EGV D +T SI SAC H G +D + + + K ++ +V+ +VD
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 459 MLGRAG 464
M R G
Sbjct: 514 MFSRCG 519
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
+N LI GY G +A+ F +M+ G+ PD TF LSAC+ + G + +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAA 500
K+ ++ +V G L A + +M N W +++ A R + A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICGYARRDFAKDAV 220
Query: 501 NYLFQL--EPEHTGYFVLMSNIYAASNKWR--EVG-KLREDMKNKGLK 543
+ F++ + E T V M + +A K E G K+ ++N G++
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 348/574 (60%), Gaps = 14/574 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA--KCGQTDDGCKVFDEMSV 173
+LK C S + E K VH I++ G DS+ + LV A + G + C +F ++
Sbjct: 37 LLKRCKS---MEEFKQVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFSQIEE 93
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+ MI + EEAL+L+ + + G+ D+ T V A L + + +
Sbjct: 94 PGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKEGVQI 153
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H + D+ +QN +++MY +CG +E A +VF+ M+++ + SW+S++ +
Sbjct: 154 HAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMW 213
Query: 294 SEALLLFDEMQNSDCKPNPVTALI-LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
E L+L +M + L+ +SACT+LGS LGR HG ++ + +++ ++ +
Sbjct: 214 HECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNISELNVVVKTS 273
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++DMY KCG L+ +F ++ + +N S+ V+IAG +HG GR+A+ FS MLEEG+
Sbjct: 274 LIDMYVKCGSLEKGLCVFQNM--AHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLT 331
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PD + + +LSACSHAGL++EG +CF M + +KP ++HY CMVD++GRAG L EA+D
Sbjct: 332 PDDVVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYD 391
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
+IK MP+ PND VW +LL AC++H GEIAA +F+L + G +++++N+YA + K
Sbjct: 392 LIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLANMYARAKK 451
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W V ++R +M K L + FS++E +++ F + D+ P + +Y ++ M ++K
Sbjct: 452 WANVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQQMEWQLKF 511
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY PD+S L DV+++++ L +HS+KLA+AF ++ + + +++++NLR+CNDCH+
Sbjct: 512 EGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIRISRNLRMCNDCHTY 571
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+FIS IY R+I VRD NRFHHF+ GTCSC DYW
Sbjct: 572 TKFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 605
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/552 (39%), Positives = 328/552 (59%), Gaps = 13/552 (2%)
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F SD ++ L++ YA +VFDE V+++ W M+ A A+ EEAL
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339
Query: 201 KTQQEGLLSDSVTIVS-----VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+ G+ DS + +A++ L + + +H +AI + + +++
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDC 399
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK--PNPV 313
YA+ G V A VF M R+L+SW++M+ Y +N + +A+ +F EM SD PN +
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T + ++ AC + + G+ H YI+ + ++ NA+M MY KCG L+T +FN I
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
RNV SWN LI+GYGMHG GR++L+ F +M+EEG+ P+ ITF S+L ACSH GL+++
Sbjct: 520 G-RRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQ 578
Query: 434 GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
G+K F M + +V P +HYACMVD+LGRAG L EA ++I+ M + P+ VWG+LL ACR
Sbjct: 579 GKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACR 638
Query: 494 IHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
IHG E+A ++LF LEP + G +VL+++IYA + +V L+E ++ L+K
Sbjct: 639 IHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGC 698
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S IE K + F + D NP +E+ + ++K GY+PD L+D+E+E++E +
Sbjct: 699 SWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERI 758
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
L HSEKLAVAFG++ +++TKNLR+C DCHS +FIS R+I+VRD NRFHH
Sbjct: 759 LLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHH 818
Query: 669 FEGGTCSCNDYW 680
F G CSC DYW
Sbjct: 819 FRNGVCSCRDYW 830
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 192/378 (50%), Gaps = 15/378 (3%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H L + L ++I Y AR +F+ F+WN M++A A
Sbjct: 270 VHRRLEADPVFRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNI--FVWNAMLKALAL 327
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS---LILEGKV--VHGDIIRTGFL 142
H E L + M R G+ +SY++ LKAC + S L +V +H IR G+
Sbjct: 328 ADHGEEALTCLADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYG 387
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK- 201
++V L+D YAK G +VF M R+LVSW+ MI Y + E+P +A+ +FQ+
Sbjct: 388 LHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEM 447
Query: 202 -TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
L+ +S+TIVSV A + + + + +H Y + F + + N+++AMY +CG
Sbjct: 448 MASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCG 507
Query: 261 NVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
+E R +F+ + +R+++SWNS+++GY +G E+L +F+EM PN +T + ++
Sbjct: 508 CLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVL 567
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND--IHPSE 377
AC+++G + G+K ++ N+ A ++D+ + G LD A + I PS
Sbjct: 568 GACSHVGLVEQGKKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSP 627
Query: 378 RNVSSWNVLIAGYGMHGH 395
+ W L+ +HGH
Sbjct: 628 Q---VWGSLLGACRIHGH 642
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/632 (35%), Positives = 367/632 (58%), Gaps = 31/632 (4%)
Query: 66 NSIHNDKSYSFLWNTMI-----RAYANNGHCV-----ETLELYSTMRRSGISSNSYTFPF 115
SI +++S++F +I R N G C+ + + +YS ++ + F
Sbjct: 77 TSISHNRSFAFRHTDLIPKQFKRFNTNKGCCIFREASQFIVVYSIVQ---------SLVF 127
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+ +C S S +H +I++ SD ++ LV MY K G +D ++FDEM +D
Sbjct: 128 AISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKD 184
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
LVSW +++ L F + + E G + VT++SV SA +G + + +++H
Sbjct: 185 LVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLH 244
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
G + + NS++ MY + G ++ A +F+ M R L+SWNSM+ + NG A
Sbjct: 245 GVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAE 304
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
+ + LF+ M+ + P+ T + L+ ACT G + H YI D + A++
Sbjct: 305 KGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALL 364
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
++YAK G L+ +E++F +I +R+ +W ++AGY +H GR+A++ F M++EGV+ D
Sbjct: 365 NLYAKLGRLNASEDIFEEI--KDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVD 422
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
H+TFT +LSACSH+GL++EG+K F M+++ V+P + HY+CMVD+LGR+G L +A+++I
Sbjct: 423 HVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELI 482
Query: 474 KQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
K MP+ P+ VWGALL ACR++G + A L L+P ++++SNIY+A+ WR
Sbjct: 483 KSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWR 542
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
+ K+R MK + L + S IE+G I F D+++P E++ K+E + +I+ AG
Sbjct: 543 DASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAG 602
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
P LHD+++E + M+N HSEKLA+AFG++ + +TKNLR+C DCHS +
Sbjct: 603 CAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAK 662
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
F S + +R II+RD+ RFHHF G CSC DYW
Sbjct: 663 FASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/676 (34%), Positives = 385/676 (56%), Gaps = 15/676 (2%)
Query: 16 LKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
L+SC LR +H+ L SG + L +I Y+ + +A LF+++
Sbjct: 24 LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
S W T++ N + L +S+M R+G+ + +A A+ + G +
Sbjct: 84 LVS--WTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQL 141
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H +R GF ++ +V + L DMY+K G + C+VFD+M +D V+WT MI Y +
Sbjct: 142 HCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNL 201
Query: 193 EEALILFQKTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E A+I F+ ++EGL+ +D + SV SA G L D A+A+H + + F +++ ++N+
Sbjct: 202 EAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNA 261
Query: 252 IVAMYARCGNVEKARLVFDMMEKR-DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+ MYA+ +++ A V + + +++S S++ GYI+ +ALL+F E++ +P
Sbjct: 262 LTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEP 321
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N T ++ C + G + H +I +++ D+ + + ++DMY KCG + + +F
Sbjct: 322 NEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLF 381
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+I +WN I HGHGR+A+ F +M G++P+HITF S+L+ACSHAGL
Sbjct: 382 KEIE--YHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGL 439
Query: 431 IDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+DEG K F M ++P+ +HY+C++DM GRAG L EA I +MP+ PN W +LL
Sbjct: 440 VDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLL 499
Query: 490 LACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+ G EIAA+ + +LEP++TG V +S IYA+ +W +V +R+ M++ +KK
Sbjct: 500 GACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKK 559
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
FS ++ K F + D +P +++Y+K+E + IK GY+PD ++ED
Sbjct: 560 LPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTA 619
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
++ +L YHSE++AVAF ++++ + V KNLR+C DCHSA +FIS + R IIVRD +
Sbjct: 620 KQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNS 679
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 680 RFHHFVKGGCSCGDYW 695
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/561 (38%), Positives = 340/561 (60%), Gaps = 8/561 (1%)
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
I + K VH + TG + D V L+ M AK +F++M RD VSW+VMI
Sbjct: 16 IFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGG 75
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+ + E F++ + G D+ ++ V A ++ + +H + N D
Sbjct: 76 FVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLD 135
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ +++V MYA+CG ++ A+ +FD M K+DL++ M+ GY + G+ +E+ +LFD+M+
Sbjct: 136 NFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRR 195
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
P+ V + +V+AC LG+ R H Y+ +D L A++DMYAKCG +D+
Sbjct: 196 DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDS 255
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
+ +F+ + ++NV SW+ +I YG HG GR+ALE F ML G+ P+ ITF S+L AC
Sbjct: 256 SREIFDRM--EQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYAC 313
Query: 426 SHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SHAGL+D+G + F+ M+ V+P+VKHY CMVD+LGRAG L +A +I+ M + ++ +
Sbjct: 314 SHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGI 373
Query: 485 WGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W A L ACRIH ++ AA L L+ ++ G+++L+SNIYA + +W++V K+R M
Sbjct: 374 WCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAK 433
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
+ LKK ++ IE I F D + E+Y+ ++S++ +++ AGY+PD + LHD
Sbjct: 434 RRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHD 493
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
V++E + +L+ HSEKLA+AFG++ +++TKNLRVC DCHS + +S I +R II
Sbjct: 494 VDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDII 553
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRDANRFHHF+ G CSC DYW
Sbjct: 554 VRDANRFHHFKEGICSCGDYW 574
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 216/384 (56%), Gaps = 5/384 (1%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
F+ L C + ++Q+H+ +TT+G+I+ L + K++ + + TA LFN +
Sbjct: 5 FFISTLFKCRNIFQIKQVHAQVTTTGIIHD-LIVANKLLYMCAKHKDLVTAHLLFNKMEE 63
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
S W+ MI + NG + + + R+G ++++ PFV+KAC ++ G+
Sbjct: 64 RDPVS--WSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGR 121
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
++H +++ G D++V + LVDMYAKCG D+ ++FD M +DLV+ TVMI Y +
Sbjct: 122 LIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECG 181
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
KP E+ +LF + +++G + D V +V++ +A +LG + KA+ VH Y + D+ +
Sbjct: 182 KPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGT 241
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ MYA+CG+++ +R +FD ME++++ISW++M+ Y +GQ EAL LF M NS P
Sbjct: 242 AMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIP 301
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYI-INSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N +T + L+ AC++ G G + + ++ ++ D ++D+ + G LD A +
Sbjct: 302 NRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRL 361
Query: 370 FNDIHPSERNVSSWNVLIAGYGMH 393
++ E++ W + +H
Sbjct: 362 IENME-VEKDEGIWCAFLGACRIH 384
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/561 (39%), Positives = 332/561 (59%), Gaps = 8/561 (1%)
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
+ + + VH I G + V L+ MY + G +D ++FD MS R SW+V++
Sbjct: 66 LFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGG 125
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y + +F++ + G D + V A L D+ + +H +
Sbjct: 126 YAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYG 185
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ ++V MYARC VE A +F M KRDL +W M+ ++G E+L+ FD M+N
Sbjct: 186 HFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRN 245
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
P+ V + +V AC LG+ + H YI + +D L A++DMYAKCG +++
Sbjct: 246 QGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVES 305
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F+ + RNV +W+ +IA YG HG G KALE F ML G+ P+ ITF S+L AC
Sbjct: 306 ARWIFDRMQV--RNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYAC 363
Query: 426 SHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SHAGLI+EG++ F+ M + V P+VKHY CMVD+LGRAG L EA +MI+ MP+ ++ +
Sbjct: 364 SHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVL 423
Query: 485 WGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
WGALL ACRIH E A L +L+ + G++VL+SNIYA + KW ++ K R+ M
Sbjct: 424 WGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTK 483
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
GL+K + IE G+ + F D+ +P E+YK ++ + ++++AGY PD + L+D
Sbjct: 484 GGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYD 543
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
V++E ++ +L HSEKLA+AFG++ L +++TKNLRVC DCH+ +F+S I ++ II
Sbjct: 544 VDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTII 603
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRDA RFHHF+ G CSC DYW
Sbjct: 604 VRDAKRFHHFKEGVCSCRDYW 624
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 231/438 (52%), Gaps = 9/438 (2%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
T+ F LL SC L +RQ+H+ + T+G L + K++ Y G A+ LF+
Sbjct: 53 TKRFRSSLL-SCRNLFQVRQVHAQIATNGAFRN-LAVANKLLYMYVERGALEDAQELFDG 110
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ YS W+ ++ YA G+ ++ + RSG + Y+ P V++AC +
Sbjct: 111 MSKRHPYS--WSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLK 168
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+++H ++ G +V A LVDMYA+C +D ++F +M RDL +WTVMI A
Sbjct: 169 CGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALA 228
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
++ P E+L+ F + + +G++ D V +V+V A +LG + KA+A+H Y + D+
Sbjct: 229 ESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVI 288
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ +++ MYA+CG+VE AR +FD M+ R++I+W++M+ Y +GQ +AL LF M S
Sbjct: 289 LGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSG 348
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTA 366
PN +T + L+ AC++ G + G++F + + + D ++D+ + G LD A
Sbjct: 349 ILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEA 408
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSAC 425
M + P E++ W L+ +H H A +L+ + KP H S + A
Sbjct: 409 LEMIEGM-PVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYA- 466
Query: 426 SHAGLIDEGRKCFADMTK 443
+AG ++ K MTK
Sbjct: 467 -NAGKWEDMAKTRDLMTK 483
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/702 (34%), Positives = 376/702 (53%), Gaps = 54/702 (7%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L + SLR I G + +G+ I+ YT G + A F ++ YS
Sbjct: 374 LDDLELIGSLRPIAIKTGYEGDVV----VGSAILNAYTRNGSLDLAMHFFETMPERNEYS 429
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
W TMI A+A G + ++LY + +++ + ++ A A I + +++ +
Sbjct: 430 --WTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTA----MMTAYAQVGRIQKARLIFDE 483
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
I+ ++ + A++ Y + G + +F +M V++ SW MI + Q E+ EA
Sbjct: 484 ILNPNVVAWN----AIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREA 539
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
L L + + G + + S SA +GDV + +H AI + + N +++M
Sbjct: 540 LELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISM 599
Query: 256 YARCGNVEK-------------------------------ARLVFDMMEKRDLISWNSML 284
YA+CGNVE AR+VF+ M KRD++SW +++
Sbjct: 600 YAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAII 659
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
+ Y+Q G AL LF +M KPN +T L+SAC LG+ +LG +FH I
Sbjct: 660 SAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFD 719
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ N+++ MY KCG D +F ++ E ++ +WN ++ G +G G++A++ F
Sbjct: 720 TFLFVGNSLITMYFKCGYED-GFCVFEEM--PEHDLITWNAVLVGCAQNGLGKEAIKIFE 776
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRA 463
QM EG+ PD ++F +L ACSHAGL+DEG F MT K + P V HY CMVD+LGRA
Sbjct: 777 QMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRA 836
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L EA +I+ MP+ P+ +W ALL ACRIH G+ A LFQ+ + +VL+S
Sbjct: 837 GYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLS 896
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
N++A+ W +V ++R+ MK++GL K S I+ + F T DR + +E+Y ++
Sbjct: 897 NLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALK 956
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ GYMPD + LHDVE+E +++ L YHSEKLAV FGI++ + +Q+ KNLR
Sbjct: 957 EYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLR 1016
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+C DCH+ +F+S + RKII+RD NRFHHF G+CSC DYW
Sbjct: 1017 ICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCSCGDYW 1058
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/580 (24%), Positives = 238/580 (41%), Gaps = 152/580 (26%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGI 106
+I Y+ G+ + AR LF++ + W ++ YA G E E++ +M R+ +
Sbjct: 208 MINGYSQNGKVDEARLLFDAFVGKNIRT--WTILLTGYAKEGRIEEAREVFESMTERNVV 265
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA------ALVDMYAKCGQ 160
S N+ ++ G V +GD+ L D + ++V Y C +
Sbjct: 266 SWNA---------------MISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYR 310
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
+ ++FD+M R+ VSW VMI+ Y EA +F K + D V V SA
Sbjct: 311 MSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSA 370
Query: 221 VGQLGDV--------------LKAQAVHGYAICNA------------FLEDLCIQN---- 250
+ L D+ + V G AI NA F E + +N
Sbjct: 371 ITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSW 430
Query: 251 -SIVAMYARC-------------------------------GNVEKARLVFDMMEKRDLI 278
+++A +A+C G ++KARL+FD + +++
Sbjct: 431 TTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVV 490
Query: 279 SWNSMLTGYIQNG-------------------------------QASEALLLFDEMQNSD 307
+WN+++ GY QNG ++ EAL L E+ S
Sbjct: 491 AWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSG 550
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
P+ + +SAC +G ++GR H I + + ++ + N ++ MYAKCG+++
Sbjct: 551 SVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGS 610
Query: 368 NMFNDIHPSE-----------------------------RNVSSWNVLIAGYGMHGHGRK 398
++F I + R+V SW +I+ Y GHG
Sbjct: 611 HVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEV 670
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
AL+ F ML G+KP+ +T TS+LSAC + G I G + A + KL + ++
Sbjct: 671 ALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLIT 730
Query: 459 MLGRAGCLYE-AFDMIKQMPLPPNDSV-WGALLLACRIHG 496
M + C YE F + ++M P +D + W A+L+ C +G
Sbjct: 731 MYFK--CGYEDGFCVFEEM--PEHDLITWNAVLVGCAQNG 766
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 170/357 (47%), Gaps = 34/357 (9%)
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
+ G+ ++ +VF+EM RD+VSW MI Y Q K +EA +LF + + + ++ +
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLT 241
Query: 216 SVASA--VGQLGDVLKAQAVHGYAICNAFL---------------------EDLCIQNSI 252
A + + +V ++ NA + +++ NS+
Sbjct: 242 GYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSV 301
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V Y C + +AR +FD M +R+ +SW M++GY+ EA +F +M + +P+
Sbjct: 302 VTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQ 361
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
++++SA T L +L I + + D + +A+++ Y + G LD A + F
Sbjct: 362 SIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFET 421
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ ERN SW +IA + G A++ + ++ E+ V T T++++A + G I
Sbjct: 422 M--PERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQ 475
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ R F ++ + P V + ++ + G L EA D+ ++MP+ N + W A++
Sbjct: 476 KARLIFDEI----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPV-KNSASWAAMI 527
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N+ + R G VE+AR VF+ M +RD++SWNSM+ GY QNG+ EA LLFD + +
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
T IL++ G + R+ + S + + NA++ Y + GDL A +
Sbjct: 235 ----TWTILLTGYAKEGRIEEARE----VFESMTERNVVSWNAMISGYVQNGDLKNARKL 286
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F+++ E+NV+SWN ++ GY +A E F QM E + +++ ++S H
Sbjct: 287 FDEM--PEKNVASWNSVVTGYCHCYRMSEARELFDQMPER----NSVSWMVMISGYVHIS 340
Query: 430 LIDEGRKCFADMTKLSVKPE 449
E F M + +P+
Sbjct: 341 DYWEAWDVFVKMCRTVARPD 360
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/761 (31%), Positives = 384/761 (50%), Gaps = 108/761 (14%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP----NTARSLFNSIHNDKSYSFLWNTM 81
R IH+ +GL+ A +L ++ Y G + AR LF+ I + +F WN++
Sbjct: 45 RAIHAHAVKAGLLVSA-YLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 82 IRAYANNGHCVETLELYSTMRR-------------------------------SGISSNS 110
+ YA +G + +++ M G++ +
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
+ VL +CA+ G+ VH +I+ G S V +++ MY KCG + VF+
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS--------------------- 209
M VR SW M++ Y + + AL +F+ ++ ++S
Sbjct: 224 MKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFF 283
Query: 210 -----------DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
D T+ SV SA L + + +H Y + I N++++ YA+
Sbjct: 284 SRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAK 343
Query: 259 CGNVE---------------------------------KARLVFDMMEKRDLISWNSMLT 285
G+VE +AR VFD+M RD+I+W +M+
Sbjct: 344 SGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIV 403
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY QNGQ EA+ LF M S +PN T ++SAC L G++ H I S +
Sbjct: 404 GYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQ 463
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
++ NA++ +YA+ G + A +F+ I + V+ W +I HG G +A+ F +
Sbjct: 464 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT-WTSMIVALAQHGLGEQAIVLFEE 522
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAG 464
ML GVKPD +T+ + SAC+HAG ID+G++ + M + + PE+ HYACMVD+L RAG
Sbjct: 523 MLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAG 582
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA + I++MP+ P+ VWG+LL ACR+ E+AA L ++P+++G + ++N
Sbjct: 583 LLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALAN 642
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
+Y+A +W + ++ + K+K +KK FS + F D ++P + KK
Sbjct: 643 VYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAE 702
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
M EIK AG++PDL+ LHDV+DE +E +L+ HSEKLA+AFG+++ + +++ KNLRV
Sbjct: 703 MWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRV 762
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
CNDCH+A +FIS + R+IIVRDA RFHHF G CSC DYW
Sbjct: 763 CNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 189/468 (40%), Gaps = 100/468 (21%)
Query: 129 GKVVHGDIIRTGFLSDSYV-------------------------------------QAAL 151
G+ +H ++ G L +Y+ +L
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ MYAK G+ D VF +M RD VSWTVM+ +A + +A+ F EGL
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
+ +V S+ + VH + I + + NS++ MY +CG+ E AR VF+
Sbjct: 164 FMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFER 223
Query: 272 -------------------------------MEKRDLISWNSMLTGYIQNGQASEALLLF 300
ME+R ++SWN+++ GY QNG AL F
Sbjct: 224 MKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFF 283
Query: 301 DEMQN-SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
M S +P+ T ++SAC L ++G++ H YI+ + M + + NA++ YAK
Sbjct: 284 SRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAK 343
Query: 360 CGDLDTAENMFNDIHPSE-------------------------------RNVSSWNVLIA 388
G ++TA + + ++ R+V +W +I
Sbjct: 344 SGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIV 403
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
GY +G +A+E F M+ G +P+ T ++LSAC+ + G++ + +
Sbjct: 404 GYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQ 463
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
V ++ + R+G + A + Q+ W ++++A HG
Sbjct: 464 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHG 511
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/573 (38%), Positives = 332/573 (57%), Gaps = 42/573 (7%)
Query: 105 GISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG 164
G+ P K+CA+ ++ G+ +H R G + +V + + MYA+CG+ DD
Sbjct: 7 GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDA 66
Query: 165 CKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK-TQQEGLLSDSVTIVSVASAVGQ 223
++F+EM RD+VSW MI+ + A A+ +F++ + D+ T+ S+ ++G+
Sbjct: 67 YQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK 126
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
AR ++ + VFD M + LISWN+M
Sbjct: 127 ---------------------------------ARVEDIALLKGVFDEMRFKGLISWNAM 153
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
L Y N EA+ LF MQ +P+ VT ++ +C + + LG++ H I M
Sbjct: 154 LAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRM 213
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
L NA+MDMYA CG L A ++F+ + R+V SW +I+ YG HGHGR+A++ F
Sbjct: 214 CSSMLLENALMDMYANCGCLKEARDVFDSM--GTRDVVSWTSIISAYGRHGHGREAIDLF 271
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGR 462
+M +G++PD I F +IL+ACSHAGL+D G+ F MT + + P+++HYACMVD+LGR
Sbjct: 272 EKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGR 331
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLM 517
AGC+ EA+D I MP+ PN+ VWGALL ACRIH G +AA+ L +L P+ TGY+VL+
Sbjct: 332 AGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLL 391
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SNIYA + +W +V +R M++KG+KK S E G + FH D +P K +YKK+
Sbjct: 392 SNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKL 451
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
+ I+ GY P++ LHDVE+ED+E L+ HSEKLA+AF ++N P +++T NL
Sbjct: 452 SELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNL 511
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
R C+DCH A + IS I R+II++D NR H+ +
Sbjct: 512 RTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 544
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 82/148 (55%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN M+ Y NN VE +EL+ M++ GI ++ T VL +C S + GK +H I
Sbjct: 150 WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIK 209
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R S ++ AL+DMYA CG + VFD M RD+VSWT +I+AY + EA+
Sbjct: 210 RRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAID 269
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLG 225
LF+K +GL DS+ V++ +A G
Sbjct: 270 LFEKMCGQGLEPDSIAFVAILAACSHAG 297
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L SC +++L ++IH + + + L L ++ Y G AR +F+S+
Sbjct: 188 VLPSCGEVSALSLGKRIHEVIKRRRMCSSML-LENALMDMYANCGCLKEARDVFDSMGTR 246
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
S W ++I AY +GH E ++L+ M G+ +S F +L AC+ L+ GK
Sbjct: 247 DVVS--WTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGK 303
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/513 (41%), Positives = 318/513 (61%), Gaps = 39/513 (7%)
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+G+ + T+ +V A + + + + H Y I F D+ +Q ++V MYARCG++E
Sbjct: 4 KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63
Query: 265 ARLVFDMMEKR-------------------------------DLISWNSMLTGYIQNGQA 293
A VFD M +R D++SW +++ GY QNG
Sbjct: 64 AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
E+L +F++M+ + K + ++SAC L + +LGR+FH Y++ S +D + +A+
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+DMYAK G ++ A +F+ + +RN SWN +I G HG G A+ F QML+ G+KP
Sbjct: 184 VDMYAKSGSMEDACQVFDKM--PQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKP 241
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
+ I+F +LSACSH GL++EGR F MT+ + P+V HY CM+D+LGRAGCL EA +
Sbjct: 242 NEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENF 301
Query: 473 IKQMPLPPNDSVWGALLLACRIHG--EIA---ANYLFQLEPEHTGYFVLMSNIYAASNKW 527
I MP+ P+ SVWGALL ACRIHG E+A A +L +E + G +VL+SNIYAA+ +W
Sbjct: 302 INGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQW 361
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+ K+R+ MK++G+ K +S IE + F + +P KE+++ +ES++ ++K A
Sbjct: 362 DDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAA 421
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
GY+P+ + L DVED+++E L++HSEKLA+AFGI+N P ++V KNLRVC DCH+
Sbjct: 422 GYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVI 481
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+FIS + RKI+VRDANRFHHF+ G CSC DYW
Sbjct: 482 KFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 193/370 (52%), Gaps = 38/370 (10%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M G+ N +T V+KACAS + + +GK H II+ GF SD VQ ALV MYA+CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 161 TDDGCKVFD-------------------------------EMSVRDLVSWTVMITAYEQA 189
+D VFD EMS RD+VSWT +I Y Q
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+E+L +F + ++ G+ SD + SV SA L + + H Y + + F D+ +
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
+++V MYA+ G++E A VFD M +R+ +SWNS++TG Q+G+ ++A+LLF++M + K
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
PN ++ + ++SAC++ G GR + + N + D + ++D+ + G LD AEN
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML--EEGVKPDHITFTSILSACS 426
N + P E +VS W L+ +HG+ A +L E + ++ ++I +A
Sbjct: 301 FINGM-PVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAA-- 357
Query: 427 HAGLIDEGRK 436
AG D+ K
Sbjct: 358 -AGQWDDAAK 366
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 114/209 (54%), Gaps = 2/209 (0%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W +I YA NG+ E+L +++ MR++G+ S+ + VL ACA + + G+ H ++
Sbjct: 110 WTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVV 169
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
++GF D V +ALVDMYAK G +D C+VFD+M R+ VSW +IT Q + +A++
Sbjct: 170 QSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVL 229
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN-AFLEDLCIQNSIVAMY 256
LF++ Q G+ + ++ V V SA G V + + N + D+ ++ +
Sbjct: 230 LFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLL 289
Query: 257 ARCGNVEKAR-LVFDMMEKRDLISWNSML 284
R G +++A + M + D+ W ++L
Sbjct: 290 GRAGCLDEAENFINGMPVEPDVSVWGALL 318
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 30/223 (13%)
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M KPN T +V AC + S + G++ H YII + D ++ A++ MYA+CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 363 LDTAENMFNDIHP-----------------------------SERNVSSWNVLIAGYGMH 393
L+ A ++F+ + SER+V SW +IAGY +
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY 453
G+G ++L F+QM + G+K D S+LSAC+ ++ GR+ A + + ++
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+ +VDM ++G + +A + +MP N+ W +++ C HG
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMP-QRNEVSWNSIITGCAQHG 222
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 361/637 (56%), Gaps = 12/637 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ PN+A+ L + N + W +I NG L +S MRR I N +
Sbjct: 52 YSKLDRPNSAQLLLSLTPNRSVVT--WTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDF 109
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TFP KA S L GK VH ++ G +SD +V + DMY+K G T++ K+FDEM
Sbjct: 110 TFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEM 169
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
R++ +W ++ + ++AL F + + EG + +T + +A + +
Sbjct: 170 PERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGR 229
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+HG+ + + F D+ + N ++ Y +C V + ++F + K + +SW SM+ Y+QN
Sbjct: 230 QLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQND 289
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+ +A L+F + +P ++SAC L ++G+ H + + + + + +
Sbjct: 290 EEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGS 349
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML--EE 409
A++DMY KCG ++ AE F+++ ERN+ +WN +I GY G A+ F +M
Sbjct: 350 ALVDMYGKCGSIEDAERAFDEM--PERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSH 407
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYE 468
V P+++TF +LSACS AG ++ G + F M + ++P +HYAC+VD+LGRAG + +
Sbjct: 408 RVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQ 467
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAA 523
A+ IK+MP+ P SVWGALL A ++ G+ +AA+ LF+L+P +G VL+SN++AA
Sbjct: 468 AYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAA 527
Query: 524 SNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE 583
+ +W E +R++MK+ G+KK A S I G + F D + E+ + + E
Sbjct: 528 AGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGE 587
Query: 584 IKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
++ AGY+PD S AL D+E+E++ + YHSEK+A+AFG++++ +++TKNLR+C DC
Sbjct: 588 MEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDC 647
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
HSA +FIS I R+IIVRD N FH F CSC DYW
Sbjct: 648 HSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 180/364 (49%), Gaps = 8/364 (2%)
Query: 129 GKVVHGDIIRTGFLSD---SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
G+ H II+T L + S++ LV+MY+K + + + R +V+WT +I
Sbjct: 25 GRAAHAQIIKT--LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAG 82
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Q + AL F +++ + + T A G L L + VH A+ + D
Sbjct: 83 SVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISD 142
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ + S MY++ G E+AR +FD M +R++ +WN+ L+ + G+ +AL F E ++
Sbjct: 143 VFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRH 202
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+PN +T ++AC +LGR+ HG+++ S + D ++ N ++D Y KC +
Sbjct: 203 EGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGC 262
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
+E +F+ I S+ N SW +I Y + KA F + +EG++P +S+LSAC
Sbjct: 263 SEIIFSGI--SKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSAC 320
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
+ +++ G+ K V + + +VDM G+ G + +A +MP N W
Sbjct: 321 AGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTW 379
Query: 486 GALL 489
A++
Sbjct: 380 NAMI 383
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/672 (34%), Positives = 373/672 (55%), Gaps = 15/672 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L++C + L R++H + G + + +I Y G+ +AR LF+ +
Sbjct: 202 VLRTCGGIPDLARGREVHVHVVRYGY-ELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y NG E L+L+ MR + + T V+ AC G+
Sbjct: 261 DIIS--WNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I TGF D V +L MY G + K+F M +D+VSWT MI+ YE
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFL 378
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
PE+A+ ++ Q+ + D +T+ +V SA LGD+ +H AI + + + N+
Sbjct: 379 PEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY++C ++KA +F + ++++ISW S++ G N + EAL+ F +M+ + +PN
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPN 497
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T ++AC +G+ G++ H +++ + + +D L NA++DMY +CG ++ A N FN
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFN 557
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+++VSSWN+L+ GY G G +E F +M++ V+PD ITF S+L C + ++
Sbjct: 558 S---QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMV 614
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G F+ M + V P +KHYAC+VD+LGRAG L EA I++MP+ P+ +VWGALL A
Sbjct: 615 RQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIH GE++A +F+L+ GY++L+ N+YA KWREV K+R MK GL A
Sbjct: 675 CRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA 734
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S +E + F + D+ +P KE+ ++ ++ G + D + R+
Sbjct: 735 GCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRD 794
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
+ HSE+ A+AFG++N P + VTKNL +C CH +FIS RR+I VRD+ F
Sbjct: 795 EIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREISVRDSEHF 854
Query: 667 HHFEGGTCSCND 678
HHF+ G CSC D
Sbjct: 855 HHFKDGECSCGD 866
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 229/460 (49%), Gaps = 8/460 (1%)
Query: 31 SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGH 90
S+ S + + ++ LG + + +G A +F + +S WN ++ YA G+
Sbjct: 118 SVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFS--WNVLVGGYAKQGY 175
Query: 91 CVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA 149
E + LY M G+ + YTFP VL+ C + G+ VH ++R G+ D V
Sbjct: 176 FDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVN 235
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
AL+ MY KCG +FD M RD++SW MI+ Y + E L LF + +
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDP 295
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D +T+ SV SA LGD + +H Y I F D+ + NS+ MY G+ +A +F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLF 355
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
M+ +D++SW +M++GY N +A+ + M KP+ +T ++SAC LG
Sbjct: 356 SRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G + H I + + + N +++MY+KC +D A ++F++I +NV SW +IAG
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI--PRKNVISWTSIIAG 473
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
++ +AL FF QM + ++P+ IT T+ L+AC+ G + G++ A + + V +
Sbjct: 474 LRLNNRCFEALIFFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++DM R G + A++ + S W LL
Sbjct: 533 DFLPNALLDMYVRCGRMNIAWNQFNSQ--KKDVSSWNILL 570
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
L G NG+ EA+ L + MQ + + LV C + + + G K + ++S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ L NA + M+ + G+L A +F + SERN+ SWNVL+ GY G+ +A+ +
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKM--SERNLFSWNVLVGGYAKQGYFDEAICLY 183
Query: 404 SQML-EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
+ML GVKPD TF +L C + GR+ + + + ++ ++ M +
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 463 AGCLYEAFDMIKQMP 477
G + A + +MP
Sbjct: 244 CGDVKSARLLFDRMP 258
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/647 (35%), Positives = 370/647 (57%), Gaps = 51/647 (7%)
Query: 78 WNTMIRAYANNGHCVETLELY-------STMRRSGISSNSYTFPFVLKACASNSLILEGK 130
+N +I ++ G + + +Y S++R S I+ ++ V+ A A L GK
Sbjct: 106 YNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMST----MVMAASALGDRAL-GK 160
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE-------------------- 170
H I+R GF ++++V + LVDMYAK D + FDE
Sbjct: 161 QFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCK 220
Query: 171 -----------MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
M+ RD ++WT M+T + Q EAL +F++ + +G+ D T S+ +
Sbjct: 221 MVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILT 280
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
A G L + + + +H Y I + +++ + +++V MY++C +++ A VF M +++IS
Sbjct: 281 ACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIIS 340
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
W +++ GY QNG + EA+ +F EMQ P+ T ++S+C L S + G +FH +
Sbjct: 341 WTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLAL 400
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
S + T+ NA++ +Y KCG ++ A +F+++ S + SW L++GY G ++
Sbjct: 401 VSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM--SFHDQVSWTALVSGYAQFGRAKET 458
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVD 458
++ F +ML +GVKPD +TF +LSACS AG +++GR F M K + P HY CM+D
Sbjct: 459 IDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMID 518
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGY 513
+ R+G L EA + IKQMP+ P+ WG LL ACR+ G++ AA L +++P++
Sbjct: 519 LYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPAS 578
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+VL+ +++AA +W EV +LR M+++ +KK S I+Y + F D+ +P K +
Sbjct: 579 YVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGI 638
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
Y+K+E + ++ GY PD+S LHDV D D+ HM+++HSEKLA+AFG++ + E +++
Sbjct: 639 YEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRI 698
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH+A +FIS I R I+VRDA RFH F G CSC D+W
Sbjct: 699 VKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 181/335 (54%), Gaps = 4/335 (1%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR LF + D+ S W TM+ + NG E LE++ MR GI+ + YTF +L AC
Sbjct: 225 ARRLFE-VMTDRD-SITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTAC 282
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ S + +GK +H IIRT + + +V +ALVDMY+KC VF M+ ++++SWT
Sbjct: 283 GALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWT 342
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I Y Q EEA+ +F + Q++G+ D T+ SV S+ L + + H A+ +
Sbjct: 343 ALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVS 402
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ + + N++V +Y +CG++E A +FD M D +SW ++++GY Q G+A E + LF
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLF 462
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAK 359
++M KP+ VT + ++SAC+ G + GR FH + + ++D+Y++
Sbjct: 463 EKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSR 522
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
G L AE + P + W L++ + G
Sbjct: 523 SGKLKEAEEFIKQM-PMHPDAIGWGTLLSACRLRG 556
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 132/278 (47%), Gaps = 32/278 (11%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+L N++++ A + +F M +RD++S+N+++ G+ G ++A+ ++ +
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 305 NSD--CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
+D +P+ +T +V A + LG R LG++FH I+ +A + + ++DMYAK
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 363 LDTAENMFNDIHP-----------------------------SERNVSSWNVLIAGYGMH 393
+ A+ F+++ ++R+ +W ++ G+ +
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY 453
G +ALE F +M +G+ D TF SIL+AC +++G++ A + + V
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVG 310
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ +VDM + + A + ++M N W AL++
Sbjct: 311 SALVDMYSKCRSIKLAETVFRRMTC-KNIISWTALIVG 347
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/683 (33%), Positives = 377/683 (55%), Gaps = 15/683 (2%)
Query: 8 TEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
T+ Y +L +C SL+ +IH + G +G +I Y G A
Sbjct: 105 TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVF-VGTALINMYNKCGSVRGAWDS 163
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F + + S W MI A + LY M+ G+ N T V A
Sbjct: 164 FKRLEHRDVVS--WTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPH 221
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ EGK ++ + SD V + ++M+ G D ++F++M RD+V+W ++IT
Sbjct: 222 YLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVIT 281
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Y Q E EA+ LF + QQ+G+ ++ +T V + + L + K + +H +
Sbjct: 282 FYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR 341
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D+ + +++++Y RC +A +F M +D+I+W M Y QNG EAL LF EMQ
Sbjct: 342 DVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQ 401
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+P T + ++ C +L + Q GR+ H +II + +++ + A+++MY KCG +
Sbjct: 402 LEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMA 461
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
A ++F + ++R++ WN ++ Y HG+ + L+ F+QM +G K D ++F S+LSA
Sbjct: 462 EARSVFEKM--AKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSA 519
Query: 425 CSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP-LPPND 482
SH+G + +G + F M + S+ P + Y C+VD+LGRAG + EA D++ ++ P+
Sbjct: 520 LSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDG 579
Query: 483 SVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+W LL ACR H + AA + + +P H+G +V++SN+YAA+ W V ++R+ M
Sbjct: 580 ILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLM 639
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
+++G+KK S IE + F DR +P +Y +++ + E++ AGY+PD L
Sbjct: 640 RSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMIL 699
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
HDVEDE +E ML YHSE+LA+AFG+M+ P ++V KNLRVC+DCH+A ++IS + R+
Sbjct: 700 HDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGRE 759
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I+VRD +RFH+F+ G CSC DYW
Sbjct: 760 ILVRDTHRFHNFKDGRCSCKDYW 782
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 243/494 (49%), Gaps = 10/494 (2%)
Query: 6 PSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P T F+ LL+ C+ ++ R++H + G L G +I Y G A+
Sbjct: 3 PDT-AFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCG-HLIQMYAQCGSVPEAQ 60
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F + ++ F W MI Y G L ++ M+ + T+ +L ACAS
Sbjct: 61 QVFEIL--ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAS 118
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
+ +G +HG I++ GF D +V AL++MY KCG F + RD+VSWT M
Sbjct: 119 TESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAM 178
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I A Q ++ A L+++ Q +G++ + +T+ +V +A G + + + ++
Sbjct: 179 IAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVM 238
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
D+ + NS + M+ G + AR +F+ M RD+++WN ++T Y+QN EA+ LF
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR 298
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
+Q K N +T +++++ T L S G+ H + + D + A+M +Y +C
Sbjct: 299 LQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEA 358
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
A +F D+ ++V +W V+ Y +G ++AL+ F +M EG +P T ++L
Sbjct: 359 PGQAWKIFVDM--GSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVL 416
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
C+H + +GR+ + + + + E+ +++M G+ G + EA + ++M +
Sbjct: 417 DTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDI 475
Query: 483 SVWGALLLACRIHG 496
VW ++L A HG
Sbjct: 476 LVWNSMLGAYAQHG 489
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 164/345 (47%), Gaps = 17/345 (4%)
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D+ V++ +V + VH + F ++ + ++ MYA+CG+V +A+ VF
Sbjct: 4 DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+++E++D+ +W M+ Y Q G AL +F +MQ D P VT + +++AC S +
Sbjct: 64 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G + HG I+ + D + A+++MY KCG + A + F + R+V SW +IA
Sbjct: 124 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL--EHRDVVSWTAMIAA 181
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
H A + +M +GV P+ IT ++ +A + EG+ ++ ++ ++ +
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD 241
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL----------ACRIHGEIA 499
V+ ++M G AG L +A + + M + + W ++ A R+ G +
Sbjct: 242 VRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
+ + + FVLM N+Y + + + E +K G +
Sbjct: 301 QDGI----KANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR 341
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 100/199 (50%), Gaps = 6/199 (3%)
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP+ + L+ C+ + GR+ H ++ + + + + ++ MYA+CG + A+
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F + ++V +W +I Y G +AL F QM EE V P +T+ +IL+AC+
Sbjct: 62 VFEIL--ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 119
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
+ +G + + + + +V +++M + G + A+D K+ L D V W A
Sbjct: 120 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKR--LEHRDVVSWTA 177
Query: 488 LLLACRIHGEIA-ANYLFQ 505
++ AC H + A A +L++
Sbjct: 178 MIAACVQHDQFALARWLYR 196
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/778 (31%), Positives = 396/778 (50%), Gaps = 111/778 (14%)
Query: 12 YDQLLKSCNFL---ASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN----TARSL 64
Y +LL+ C ++ R IH+ +GL+ + +L ++ Y + G AR L
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLL-VSTYLCNNLLAYYASVGVSRGCFREARCL 270
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNG-----HCV--------------------------E 93
F+ I + +F WN+++ YA +G H V +
Sbjct: 271 FDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWD 330
Query: 94 TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVD 153
++ + M G + + +T VL +CA+ G+ VH +++ G S V +++
Sbjct: 331 AVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLY 390
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS---- 209
MY KCG + VF+ M VR + SW VM++ Y + E A+ +F+ + ++S
Sbjct: 391 MYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTI 450
Query: 210 ----------------------------DSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
D+ T+ SV SA L + + +H Y +
Sbjct: 451 IAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTG 510
Query: 242 FLEDLCIQNSIVAMYARCGNVE---------------------------------KARLV 268
I N++++ YA+ G+VE +AR +
Sbjct: 511 MPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREI 570
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
FD+M RD+I+W +M+ GY QNGQ EA+ LF M +PN T ++SAC L
Sbjct: 571 FDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYL 630
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
G++ H I S + ++ NA++ +YA+ G + A +F+ I + ++ W +I
Sbjct: 631 DYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT-WTSMIV 689
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVK 447
HG G +A+ F +M+ GVKPDHIT+ +LSAC+HAG +D+G++ + M + +
Sbjct: 690 AMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIV 749
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANY 502
P++ HYACMVD+ RAG L EA + I++MP+ P+ VWG+LL ACR+ E+AA
Sbjct: 750 PQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGK 809
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
L ++P ++G + ++N+Y+A +W + ++ + K+KG+KK FS + F
Sbjct: 810 LLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGA 869
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
D ++P +Y+K M EIK AG++PDL+ LHDV+DE +E +L+ HSEKLA+AFG+
Sbjct: 870 DDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGL 929
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ + +++ KNLRVCNDCH+A +FIS R+IIVRDA RFHHF G CSC DYW
Sbjct: 930 ISTPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/641 (35%), Positives = 364/641 (56%), Gaps = 12/641 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGI 106
+I Y+ G+ AR LF+ + S W+ ++ Y + G +E L L+ +
Sbjct: 67 LINLYSKCGQSKCARKLFDRMLQRNVVS--WSALMMGYLHKGEVLEVLGLFRNLVSLDSA 124
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
N Y F VL CA + + EGK HG ++++G L YV+ AL+ MY++C D +
Sbjct: 125 YPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQ 184
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+ D + D+ S+ +++A ++ EA + ++ E ++ DSVT VSV Q+ D
Sbjct: 185 ILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRD 244
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ +H + + D+ + ++++ Y +CG V AR FD + R++++W ++LT
Sbjct: 245 LQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTA 304
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y+QNG E L LF +M+ D +PN T +L++AC L + G HG I+ S K
Sbjct: 305 YLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNH 364
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA+++MY+K G++D++ N+F+++ R+V +WN +I GY HG G++AL F M
Sbjct: 365 LIVGNALINMYSKSGNIDSSYNVFSNM--MNRDVITWNAMICGYSHHGLGKQALLVFQDM 422
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDMLGRAGC 465
+ G P+++TF +LSAC H L+ EG F M K V+P ++HY CMV +LGRAG
Sbjct: 423 MSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGL 482
Query: 466 LYEAFDMIKQMPLPPNDSV-WGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA + +K D V W LL AC IH G+ + Q++P G + L+SN
Sbjct: 483 LDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSN 542
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
++A + KW V K+R+ MK + +KK S ++ + F + +P ++++KV+
Sbjct: 543 MHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQ 602
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ IK GY PD+ LHDVEDE +E L++HSEKLA+A+G+M + P +++ KNLR+
Sbjct: 603 LLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRM 662
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C+DCH A + IS R IIVRDANRFHHF G C+CND+W
Sbjct: 663 CDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 188/385 (48%), Gaps = 7/385 (1%)
Query: 116 VLKACASNSLILEGKVVHGDII---RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
+LK A+ + GK +H ++ +T SD +L+++Y+KCGQ+ K+FD M
Sbjct: 29 LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRML 88
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
R++VSW+ ++ Y + E L LF+ + + V S G V + +
Sbjct: 89 QRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGK 148
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
HGY + + L ++N+++ MY+RC +V+ A + D + D+ S+NS+L+ +++G
Sbjct: 149 QCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESG 208
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
EA + M + + VT + ++ C + QLG + H ++ + + D + +
Sbjct: 209 CRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSS 268
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
++D Y KCG++ A F+ + +RNV +W ++ Y +GH + L F++M E
Sbjct: 269 TLIDTYGKCGEVLNARKQFDGLR--DRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDT 326
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+P+ TF +L+AC+ + G + K + +++M ++G + +++
Sbjct: 327 RPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYN 386
Query: 472 MIKQMPLPPNDSVWGALLLACRIHG 496
+ M + + W A++ HG
Sbjct: 387 VFSNM-MNRDVITWNAMICGYSHHG 410
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 146/273 (53%), Gaps = 12/273 (4%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D+ NS++ +Y++CG + AR +FD M +R+++SW++++ GY+ G+ E L LF +
Sbjct: 60 DITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLV 119
Query: 305 NSDCK-PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ D PN I++S C G + G++ HGY++ S + + ++NA++ MY++C +
Sbjct: 120 SLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHV 179
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
D+A + + + P + +V S+N +++ G +A + +M++E V D +T+ S+L
Sbjct: 180 DSAMQILDTV-PGD-DVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLG 237
Query: 424 ACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPP 480
C+ + G + A + K + +V + ++D G+ G + A FD ++
Sbjct: 238 LCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRD----R 293
Query: 481 NDSVWGALLLACRIHG--EIAANYLFQLEPEHT 511
N W A+L A +G E N ++E E T
Sbjct: 294 NVVAWTAVLTAYLQNGHFEETLNLFTKMELEDT 326
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/609 (36%), Positives = 359/609 (58%), Gaps = 50/609 (8%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD-----GCKVFD 169
VL C SN+ L K++H ++RT D + + L+ A C + +V
Sbjct: 21 LVLLECCSNARDL--KIIHAHMLRTHLFFDVFAASRLI---AFCIDSTTNLLHYAIRVAS 75
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
++ +L + +I +E PE + + K + GLL D++T + A QL +
Sbjct: 76 QIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPM 135
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYA-------------------------------R 258
HG AI + F +D +QNS+V MYA R
Sbjct: 136 GMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHR 195
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG+ + AR +FD M +R+L++W++M++GY +N +A+ F+ +Q N + +
Sbjct: 196 CGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGV 255
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+S+C +LG+ +G K H Y++ + + ++ L AV+DMYA+CG+++ A +F + E+
Sbjct: 256 ISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQL--PEK 313
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V W LIAG MHG+ KAL +FS+M ++G P ITFT++L+ACSHAG+++ G + F
Sbjct: 314 DVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIF 373
Query: 439 ADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-- 495
M + V+P ++HY CMVD+LGRAG L +A + +MP+ PN +W ALL ACRIH
Sbjct: 374 ESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKN 433
Query: 496 ---GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
GE L +++PE++G++VL+SNIYA +NKW++V +R+ MK+KG++KP +S+IE
Sbjct: 434 VEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIE 493
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAV-EIKMAGYMPDLSCALHDVEDEDREHMLNY 611
+ F D+ +P +++ + E + + +IK+AGY+ + + + D+++E++E L+
Sbjct: 494 IDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGALHR 553
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSEKLA+A+GIM + +++ KNLRVC DCH+A + IS ++ ++IVRD NRFHHF+
Sbjct: 554 HSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHHFKE 613
Query: 672 GTCSCNDYW 680
GTCSC DYW
Sbjct: 614 GTCSCMDYW 622
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 214/484 (44%), Gaps = 76/484 (15%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSLFNSIHND 71
LL+ C+ L+ IH+ + + L A +I + N A + + I N
Sbjct: 23 LLECCSNARDLKIIHAHMLRTHLFFDVF--AASRLIAFCIDSTTNLLHYAIRVASQIQNP 80
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
F++N +IR + + + + Y R G+ ++ T PF++KACA G
Sbjct: 81 NL--FIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQ 138
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYA-------------------------------KCGQ 160
HG I+ GF D YVQ +LV MYA +CG
Sbjct: 139 THGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGD 198
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
++FD M R+LV+W+ MI+ Y + E+A+ F+ Q EG++++ +V V S+
Sbjct: 199 AKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISS 258
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
LG + + H Y + N +L + ++V MYARCGNVEKA +VF+ + ++D++ W
Sbjct: 259 CAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCW 318
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
+++ G +G A +AL F EM P +T +++AC++ G + G
Sbjct: 319 TALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERG--------- 369
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
L+ E+M D H E + + ++ G G RKA
Sbjct: 370 ----------------------LEIFESMKRD-HGVEPRLEHYGCMVDLLGRAGKLRKAE 406
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK-HYACMVDM 459
+F +M VKP+ + ++L AC ++ G + + L ++PE HY + ++
Sbjct: 407 KFVLKM---PVKPNAPIWRALLGACRIHKNVEVGERVGKIL--LEMQPEYSGHYVLLSNI 461
Query: 460 LGRA 463
RA
Sbjct: 462 YARA 465
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/676 (35%), Positives = 371/676 (54%), Gaps = 15/676 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L C + +L R IHS + G N + +I Y+ G A +F +
Sbjct: 238 MLAGCGSVDNLKWGRGIHSLVLKFGW-NSNVCASNTLITMYSDAGRCEDAELVFQGMVEK 296
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN+M+ YA +G+C++ L+L +TM +N TF L AC+ EGK+
Sbjct: 297 DMIS--WNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKI 354
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I G + V ALV +YAK G + KVF M RD V+W +I + +E+
Sbjct: 355 LHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEE 414
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQN 250
P+EAL F+ ++EG+ + +TI +V A D+L+ +H + I F D +QN
Sbjct: 415 PDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQN 474
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
S++ MYA+CG++ + +FD + ++ +WN+M+ +G EAL EM+ +
Sbjct: 475 SLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNV 534
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ + ++A L + G++ HG + + + +A MDMY KCG++D +
Sbjct: 535 DEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRII 594
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
P R+ SWN+L + + HG KA E F +M+ GVKPDH+TF S+LSACSH G+
Sbjct: 595 P--RPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGM 652
Query: 431 IDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++EG + M K + ++ H C++D+LGR+G EA IK+MP+ P D VW +LL
Sbjct: 653 VEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLL 712
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
AC+ HG + A L +L+P +VL SNI A + KW +V K+R M +KK
Sbjct: 713 AACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKK 772
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
A S ++ + F D +P E+Y K+E + IK AGY+PD+S AL D ++E
Sbjct: 773 KPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQ 832
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+EH L HSE+LA+A+G+++ + +++ KNLRVC DCHS ++F S I RKI++RD
Sbjct: 833 KEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPY 892
Query: 665 RFHHFEGGTCSCNDYW 680
RFH F GG CSC DYW
Sbjct: 893 RFHQFSGGQCSCTDYW 908
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 206/409 (50%), Gaps = 4/409 (0%)
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA-SNSLILEGKVVHGDIIRTG 140
+ + G E++ ++ MR G+ + ++ AC S +++EG VHG I++ G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
LSD +V +LV +Y G D KVF EM +++VSWT ++ AY +P + +++
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ + EG+ + T+ SV S L + L V G+ I ++ + NS+++M+ G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
+VE+A VF M++ D ISWNSM+ YI+NG E+L F M + N T +++
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
C + + + GR H ++ + N ++ MY+ G + AE +F + E+++
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGM--VEKDM 298
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
SWN ++A Y G+ AL+ + M +++TFTS L+ACS EG+ A
Sbjct: 299 ISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHAL 358
Query: 441 MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ + + V +V + ++G + EA + + MP + W AL+
Sbjct: 359 VIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALI 406
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 239/483 (49%), Gaps = 21/483 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I + +G A +F+ + D+ + WN+MI AY NG C E+L +S M R
Sbjct: 172 LISMFGYFGSVEEACYVFSGM--DEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKE 229
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
NS T +L C S + G+ +H +++ G+ S+ L+ MY+ G+ +D V
Sbjct: 230 INSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELV 289
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F M +D++SW M+ Y Q +AL L ++ VT S +A
Sbjct: 290 FQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFA 349
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ + +H I E++ + N++V +YA+ G + +A+ VF M KRD ++WN+++ G+
Sbjct: 350 TEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGH 409
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL---GRKFHGYIINSNMK 344
+ + EAL F M+ N +T ++ AC L L G H +II + +
Sbjct: 410 ADSEEPDEALKAFKLMREEGVPINYITISNVLGAC--LAPNDLLEHGMPIHAFIILTGFQ 467
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
D ++N+++ MYAKCGDL+++ N+F+ + + +N S+WN ++A HGH +AL+F
Sbjct: 468 SDEYVQNSLITMYAKCGDLNSSNNIFDRL--TSKNASAWNAMMAANAHHGHMEEALKFLL 525
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
+M GV D +F+ L+A + +++EG++ KL + +DM G+ G
Sbjct: 526 EMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCG 585
Query: 465 CLYEAFDMIKQMPLPPNDS--VWGALLLACRIHG--EIAANYLFQL-----EPEHTGYFV 515
E D+++ +P P N S W L + HG E A ++ +P+H +
Sbjct: 586 ---EIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVS 642
Query: 516 LMS 518
L+S
Sbjct: 643 LLS 645
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 194/399 (48%), Gaps = 5/399 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H + GL++ +G ++ Y YG A +F + S W ++ AY
Sbjct: 51 QVHGFIVKVGLLSDVF-VGTSLVHLYGNYGLAADAMKVFQEMIYKNVVS--WTALMVAYV 107
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+ G + +Y MR G+S N T V+ C S L G V G +I+ G ++
Sbjct: 108 DYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVS 167
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V +L+ M+ G ++ C VF M D +SW MI AY + +E+L F +
Sbjct: 168 VANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVH 227
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+S T+ ++ + G + ++ + +H + + ++C N+++ MY+ G E A
Sbjct: 228 KEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAE 287
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
LVF M ++D+ISWNSM+ Y Q+G +AL L M N VT ++AC+
Sbjct: 288 LVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPE 347
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
G+ H +I+ + + + NA++ +YAK G + A+ +F + +R+ +WN L
Sbjct: 348 FATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTM--PKRDGVTWNAL 405
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
I G+ +AL+ F M EEGV ++IT +++L AC
Sbjct: 406 IGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGAC 444
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL-GRKFHGYIINSN 342
++G+++ G E++ F+EM++ KP+ + LV+AC + G + HG+I+
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ D + +++ +Y G A +F ++ +NV SW L+ Y +G +
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEM--IYKNVVSWTALMVAYVDYGEPSMVMNI 118
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDE--GRKCFADMTKLSVKPEVKHYACMVDML 460
+ +M EG+ + T +S++S C L +E G + + K ++ V ++ M
Sbjct: 119 YRRMRSEGMSCNDNTMSSVISTC--VSLENELLGYQVLGHVIKYGLETNVSVANSLISMF 176
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA 491
G G + EA + M +D++ W +++ A
Sbjct: 177 GYFGSVEEACYVFSGM--DEHDTISWNSMIAA 206
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA-GLIDEGRKCFADMTKLS 445
++G+ G R+++ FF++M + GVKP I S+++AC + ++ EG + + K+
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ +V +V + G G +A + ++M + N W AL++A +GE
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEM-IYKNVVSWTALMVAYVDYGE 111
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/672 (34%), Positives = 370/672 (55%), Gaps = 45/672 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+++ Y+ G + S F + + + WN +I Y+ +G ++ Y+TM R S
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVT--WNVLIEGYSLSGLVGAAVKAYNTMMRD-FS 134
Query: 108 SN--SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK-------- 157
+N T +LK +SN + GK +HG +I+ GF S V + L+ MYA
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 158 -----------------------CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
CG +D ++F M +D VSW MI Q +E
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKE 253
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
A+ F++ + +GL D SV A G LG + + + +H I F + + + ++++
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY +C + A+ VFD M++++++SW +M+ GY Q G+A EA+ +F +MQ S P+ T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+SAC + S + G +FHG I S + T+ N+++ +Y KCGD+D + +FN+++
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
R+ SW +++ Y G + ++ F +M++ G+KPD +T T ++SACS AGL+++G
Sbjct: 434 V--RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 435 RKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
++ F MT + + P + HY+CM+D+ R+G L EA I MP PP+ W LL ACR
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Query: 494 IHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
G + AA L +L+P H + L+S+IYA+ KW V +LR M+ K +KK
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S I++ + F D +PY ++Y K+E + +I GY PD S HDVE+ + M
Sbjct: 612 SWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKM 671
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
LNYHSE+LA+AFG++ + ++V KNLRVC DCH+A + IS + R+I+VRDA RFH
Sbjct: 672 LNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHR 731
Query: 669 FEGGTCSCNDYW 680
F+ GTCSC D+W
Sbjct: 732 FKDGTCSCGDFW 743
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 133/324 (41%), Gaps = 67/324 (20%)
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +HG I + + N+IV YA + AR VFD + + +L SWN++L Y +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 291 GQASEALLLFDEMQNSD--------------------------------CKPNPVTALIL 318
G SE F+++ + D VT + +
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS-- 376
+ + G LG++ HG +I + + + ++ MYA G + A+ +F +
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 377 --------------------------ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
E++ SW +I G +G ++A+E F +M +G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA- 469
+K D F S+L AC G I+EG++ A + + + + + + ++DM + CL+ A
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 470 --FDMIKQMPLPPNDSVWGALLLA 491
FD +KQ N W A+++
Sbjct: 326 TVFDRMKQ----KNVVSWTAMVVG 345
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 251/774 (32%), Positives = 402/774 (51%), Gaps = 113/774 (14%)
Query: 18 SCNFLASLRQIHSSLTTSGLINQA--LHLGAKIIIKYT---------------------- 53
S +FL +LR +H+ L T+ L++ HL ++I YT
Sbjct: 37 SSSFLRALRCLHARLLTADLLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVA 96
Query: 54 ---------TYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS 104
G A + F+++ + + L N M+ A+A + ++ + S
Sbjct: 97 ATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 156
Query: 105 G-ISSNSYTFPFVLKACAS--NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
G + + Y+F ++ A N +H ++++G + V AL+ +Y KC
Sbjct: 157 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 216
Query: 162 D---DGCKVFDEMSVRDLVSWTVM-------------------------------ITAYE 187
+ D KV DEM +D ++WT M I+ Y
Sbjct: 217 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 276
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI--CNAFLED 245
Q+ +A LF++ E + D T SV SA G + ++VHG I F+ +
Sbjct: 277 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPE 336
Query: 246 --LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG------------ 291
L + N++V +Y++ G + A+ +FD M +D++SWN++L+GYI +G
Sbjct: 337 AALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 396
Query: 292 -------------------QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
+ +AL LF++M+ D KP T ++AC LG+ + GR
Sbjct: 397 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGR 456
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ H +++ + + NA++ MYAKCG ++ A +F + P+ +VS WN +I+ G
Sbjct: 457 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFL-VMPNLDSVS-WNAMISALGQ 514
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVK 451
HGHGR+ALE F QM+ EG+ PD I+F +IL+AC+HAGL+DEG F M + + P
Sbjct: 515 HGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGED 574
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQL 506
HYA ++D+LGR+G + EA D+IK MP P S+W A+L CR +G++ AA+ LF++
Sbjct: 575 HYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRM 634
Query: 507 EPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRV 566
P+H G ++L+SN Y+A+ +W + ++R+ M+++G+KK S IE G I F D
Sbjct: 635 IPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTK 694
Query: 567 NPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLT 626
+P +EVY+ +E + ++ GY+PD LHD+E ++E++L HSEKLAV FG++ L
Sbjct: 695 HPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLP 754
Query: 627 PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P A V V KNLR+C DCH+A F+S R+I+VRD RFHHF+ G CSC +YW
Sbjct: 755 PGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/615 (36%), Positives = 362/615 (58%), Gaps = 18/615 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W T++ + N + L ++ MRR+G++ + +A A+ L G +H +
Sbjct: 9 WTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGV 68
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R GF ++ +V + L DMY+KCG + C+VFD+M +D V+WT MI Y + E A++
Sbjct: 69 RLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVL 128
Query: 198 LFQKTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
F+ ++EGL+ +D SV SA G L D ++++H F ++ ++N+++ MY
Sbjct: 129 SFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMY 188
Query: 257 ARCGNVEKARLVFDMMEKRDLISWN-----SMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
A+ +VE A V K D WN SM+ GYI+ EAL+++ E++ +PN
Sbjct: 189 AKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPN 244
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T ++ C + G + H +I +++ D+ + + ++DMY KCG + + +FN
Sbjct: 245 EFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFN 304
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+I R +WN +I + HGHGR+A++ F +M+ G++P+HI F S+L+ACSHAGL+
Sbjct: 305 EIE--YRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLV 362
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
DEG K F M + ++P+ +HY+C++D GRAG L EA+ I +MP+ PN W +LL
Sbjct: 363 DEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLG 422
Query: 491 ACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACR+ G E+AA L +LEP +TG V +S IYA+ +W +V +R+ M++ +KK
Sbjct: 423 ACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKL 482
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
FS ++ K F + D +P K++Y+K+E + IK GY+PD S ++ED +
Sbjct: 483 PGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAK 542
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +L YHSE++AVAF ++++ + V KNLR+C DCH+AF+FI + RR IIVRD +R
Sbjct: 543 ERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSR 602
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G CSC DYW
Sbjct: 603 FHHFVNGRCSCGDYW 617
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 171/356 (48%), Gaps = 10/356 (2%)
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M R+ VSWT +++ Q +AL F ++ G+ + S A A LG L
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+H + F +L + +++ MY++CG + +A VFD M ++D ++W +M+ GY +N
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 291 GQASEALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
G A+L F +M+ + ++SA L L + H + + +++ +
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
RNA++DMYAK D+++A + I P NV S +I GY +AL + ++ +
Sbjct: 181 RNALIDMYAKSMDVESASRVLK-IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQ 239
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
GV+P+ TF+S++ C+ L+++G + A + K + + + +VDM G+ G + +
Sbjct: 240 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 299
Query: 470 FDMIKQMPLPPNDSVWGALL--LACRIHGEIAANYLFQL-----EPEHTGYFVLMS 518
+ ++ D W A++ A HG A ++ P H + L++
Sbjct: 300 MQLFNEIEY-RTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 354
>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 252/618 (40%), Positives = 365/618 (59%), Gaps = 24/618 (3%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN +R + E L LY M RS N++TFPF+LK+CA SL L +H +I
Sbjct: 22 WNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHAHVI 81
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
RTG D Y +++L++ YAKC KVFDEM + + MI+ Y KP A+
Sbjct: 82 RTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMP-NPTICYNAMISGYSFNSKPLHAVC 140
Query: 198 LFQKTQQE---GLLSD----SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
LF+K ++E GL D +VT++S+ S + +HG + F+ DL + N
Sbjct: 141 LFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVAN 200
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
S+V MY +CG VE AR VFD M RDLI+WN+M++GY QNG A L ++ EM+ S
Sbjct: 201 SLVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVSA 260
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ VT L ++SAC LG++ +GR+ I + LRNA+++MYA+CG+L A +F
Sbjct: 261 DAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRAREVF 320
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ E++V SW +I GYG+HGHG ALE F +M+E V+PD F S+LSACSHAGL
Sbjct: 321 D--RSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGL 378
Query: 431 IDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
D G + F +M K ++P +HY+C+VD+LGRAG L EA ++IK M + P+ +VWGALL
Sbjct: 379 TDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGAVWGALL 438
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
AC+IH E+A ++ +LEP + GY+VL+SNIY +N V ++R M+ + L+K
Sbjct: 439 GACKIHKNAEIAELAFQHVVELEPTNIGYYVLLSNIYTDANNLEGVSRVRVMMRERKLRK 498
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
+S +EY + F++ D +P K++Y+ ++ + +K + P+ C +
Sbjct: 499 DPGYSYVEYKGKMNLFYSGDLSHPQTKQIYRMLDELESLVKEV-HPPNEKC-----QGRS 552
Query: 605 REHML--NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
E ++ HSEKLA+AF ++N + V KNLRVC DCH + +S I R+ IVRD
Sbjct: 553 EELLIGTGVHSEKLAIAFALLNTKSGTEITVMKNLRVCVDCHLFIKLVSKIVNRQFIVRD 612
Query: 663 ANRFHHFEGGTCSCNDYW 680
A RFHHF G CSC DYW
Sbjct: 613 ATRFHHFRDGICSCKDYW 630
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 177/416 (42%), Gaps = 61/416 (14%)
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
+W + + + EAL L++ + ++ T + + L L A +H +
Sbjct: 21 AWNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHAHV 80
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
I D ++S++ YA+C AR VFD M I +N+M++GY N + A+
Sbjct: 81 IRTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPN-PTICYNAMISGYSFNSKPLHAV 139
Query: 298 LLFDEMQ-------NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
LF +M+ + D N VT L LVS C+ +G HG + D +
Sbjct: 140 CLFRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVA 199
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N+++ MY KCG+++ A +F+++ R++ +WN +I+GY +GH R LE +S+M G
Sbjct: 200 NSLVTMYVKCGEVELARKVFDEM--LVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSG 257
Query: 411 VKPDHITFTSILSACSHAGL--IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL-- 466
V D +T ++SAC++ G I + + P +++ +V+M R G L
Sbjct: 258 VSADAVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRN--ALVNMYARCGNLTR 315
Query: 467 --------------------------------YEAFDMIKQMPLPPNDSVWGALLLACRI 494
E FD + + + P+ +V+ ++L AC
Sbjct: 316 AREVFDRSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSH 375
Query: 495 HG----------EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
G E+ Y Q PEH V ++ + + E L + MK K
Sbjct: 376 AGLTDRGLEYFKEMERKYGLQPGPEHYSCVV---DLLGRAGRLEEAVNLIKSMKVK 428
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/700 (33%), Positives = 356/700 (50%), Gaps = 74/700 (10%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
+ G AR +F + + S W M+ G E ++ M G + +
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVS--WTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 59
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T VL +CA G+ VH +++ G S V ++++MY KCG ++ VF+ M
Sbjct: 60 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 172 SVRD-------------------------------LVSWTVMITAYEQAEKPEEALILFQ 200
VR +VSW MI Y Q +AL LF
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179
Query: 201 KTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ E ++ D TI SV SA LG+V + VH Y + + + N++++ YA+
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239
Query: 260 GNVEKARLVFD---------------------------------MMEKRDLISWNSMLTG 286
G+VE AR + D +M RD+++W +M+ G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y QNG+ EA+ LF M +PN T ++S C L G++ H I S ++
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+++ NA++ MYA+ G A MF+ + + ++ W +I HG G +A+ F +M
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQHGQGEEAVGLFEEM 418
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGC 465
L GV+PD IT+ +LSACSHAG ++EG++ + + + + PE+ HYACMVD+L RAG
Sbjct: 419 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGL 478
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNI 520
EA + I++MP+ P+ WG+LL ACR+H E+AA L ++P ++G + ++N+
Sbjct: 479 FSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANV 538
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
Y+A +W + ++ + K K ++K FS I F D V+P VY M
Sbjct: 539 YSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARM 598
Query: 581 AVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVC 640
EIK AG++PDL LHDV+DE +E +L+ HSEKLA+AFG+++ + ++V KNLRVC
Sbjct: 599 WEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVC 658
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NDCH+A + IS + R+IIVRDA RFHHF G CSC DYW
Sbjct: 659 NDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 196/441 (44%), Gaps = 82/441 (18%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
M+AK G+ D VF EM RD VSWTVM+ +A + EA+ +G T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 214 IVSVAS--AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
+ +V S AV Q G V + VH + + + + NS++ MY +CG+ E A VF+
Sbjct: 61 LTNVLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 118
Query: 272 -------------------------------MEKRDLISWNSMLTGYIQNGQASEALLLF 300
M R ++SWN+M+ GY QNG ++AL LF
Sbjct: 119 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 178
Query: 301 DEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
M S P+ T ++SAC LG+ ++G++ H YI+ + M ++ + NA++ YAK
Sbjct: 179 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 238
Query: 360 C---------------------------------GDLDTAENMFNDIHPSERNVSSWNVL 386
GD+++A MF ++ R+V +W +
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN--NRDVVAWTAM 296
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK--CFADMTKL 444
I GY +G +A++ F M+ G +P+ T ++LS C+ +D G++ C A + L
Sbjct: 297 IVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLL 356
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-IAANYL 503
V + ++ M R+G A M Q+ W ++++A HG+ A L
Sbjct: 357 EQSSSVSN--AIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 414
Query: 504 FQ------LEPEHTGYFVLMS 518
F+ +EP+ Y ++S
Sbjct: 415 FEEMLRAGVEPDRITYVGVLS 435
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 257/734 (35%), Positives = 395/734 (53%), Gaps = 88/734 (11%)
Query: 27 QIHSSLTTSGLINQ---ALHLGAKIIIKYTTYGEPNTAR---SLFNSIHNDKSYSFLWNT 80
Q+H+ LTTSG I A HL + + T P R SLF+ + + S +FL++T
Sbjct: 17 QLHALLTTSGRIAHRPSAEHLLSSLT---NTISAPRHLRYVLSLFDRLPH--STTFLFDT 71
Query: 81 MIRA--YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK--VVHGDI 136
+RA A+ G L L MR G+ + ++TF FV + CA+ + G ++H
Sbjct: 72 ALRACLQASAGADHPVL-LLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCLMLHAAC 130
Query: 137 IRTGFLSDSYVQA-ALVDMYAKCGQTDDGCKVFDEMSVRD-------------------- 175
+RT S + + A L+ MYA G TDD + FDE+ +D
Sbjct: 131 LRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEA 190
Query: 176 -----------LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA---- 220
+VSWT +I Y +A +P +A+ F +G+ D V ++ SA
Sbjct: 191 RRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKL 250
Query: 221 ------------VGQ----LGDVLKAQAVHGYAICNAFLEDLCI------------QNSI 252
VGQ + D L + YA C + + N+I
Sbjct: 251 KNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAI 310
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ Y + G+V+ AR +FD M RD+I++NSM+TGYI +G+ +AL LF +M+ + +
Sbjct: 311 IDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADN 370
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T + L++AC LG+ GR H I ++ D L A++DMY KCG +D A +F+
Sbjct: 371 FTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAVFHR 430
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ ER+V +W +IAG +G G+ ALE F QM +G +P +T+ ++L+ACSH+ L+D
Sbjct: 431 M--GERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLD 488
Query: 433 EGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EGR F +M L + P+V+HY CM+D+L R+G L EA +++ MP+ PN +WG++L A
Sbjct: 489 EGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGSILSA 548
Query: 492 CRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CR+H I AA +L +L PE +V + NIY S +W + ++R M+ +G+KK A
Sbjct: 549 CRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEERGVKKTA 608
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
+S I + F D+ +P+ E+ +E +A +K GY P S DV++E++E
Sbjct: 609 GYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVDVDEEEKE 668
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
L HSEK+A+AFG+++L P + + KNLRVC DCHSA + +S ++ R+IIVRD +RF
Sbjct: 669 QALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREIIVRDRSRF 728
Query: 667 HHFEGGTCSCNDYW 680
HHF G CSCND+W
Sbjct: 729 HHFRDGACSCNDFW 742
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/668 (35%), Positives = 372/668 (55%), Gaps = 28/668 (4%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
IH GL + + + ++ Y+ G N A+ F + N+ WNTMI A++
Sbjct: 270 IHGLAVKLGLSEEVM-VNNAMVYMYSKCGYLNEAQMSF--VKNNNKNVVSWNTMISAFSL 326
Query: 88 NGHCVETLELYSTMRRSG--ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF---- 141
G E L M+ G + +N T VL AC + K +HG R F
Sbjct: 327 EGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE 386
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
LS++++ A YAKCG + KVF + + + SW +I + Q P +AL L +
Sbjct: 387 LSNAFILA-----YAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQ 441
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
G D TI S+ A L + + +HGY + N D + S+++ Y CG
Sbjct: 442 MTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGK 501
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
AR++FD M+ ++L+SWN+M++GY QNG E+L LF + + + + + + + A
Sbjct: 502 ASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGA 561
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C+ L + +LG++ HGY++ + DA + +++DMYAK G + + +F+ + ++NV+
Sbjct: 562 CSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGL--KDKNVA 619
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SWN +I +G+HGHG++A+E + +M + G PD T+ IL AC HAGL++EG K F +M
Sbjct: 620 SWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEM 679
Query: 442 TKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG---- 496
+ ++P+++HYAC++DML RAG L +A ++ +MP ++ +W +LL +CR G
Sbjct: 680 QNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEI 739
Query: 497 -EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
E A L +LEP+ +VL+SN+YA KW V ++R+ MK GL+K A S IE G
Sbjct: 740 GEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGG 799
Query: 556 DIQGFHTADRVNPYWKEV---YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYH 612
+ F D + P E+ ++++E EI GY P+ S LH+V +E++ +L H
Sbjct: 800 RVYSFVVGDSLQPKSAEIRVIWRRLEERISEI---GYKPNTSSVLHEVGEEEKIDILRGH 856
Query: 613 SEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
SEKLA++FG++ T +++ KNLR+C DCH+A + IS R+I+VRD RFHHF G
Sbjct: 857 SEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDG 916
Query: 673 TCSCNDYW 680
CSC DYW
Sbjct: 917 LCSCCDYW 924
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 231/430 (53%), Gaps = 14/430 (3%)
Query: 15 LLKSCNF---LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++C + + R++H ++ S L ++I Y G P +R +F+++
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGISSNSYTFPFVLKACASNSLILEGK 130
WN ++ Y NG + ++++ + + +++TFP V+KAC + G+
Sbjct: 109 NLIQ--WNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGE 166
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
V+HG +I+ G + D +V ALV MY KCG D+ KVFD M +LVSW MI A+ +
Sbjct: 167 VIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENG 226
Query: 191 KPEEAL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
++ +L + +EGLL D VT+V++ G+V +HG A+ E++ +
Sbjct: 227 FSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVN 286
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSD 307
N++V MY++CG + +A++ F ++++SWN+M++ + G +EA L EM Q +
Sbjct: 287 NAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEE 346
Query: 308 CKPNPVTALILVSAC-TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
K N VT L ++ AC L R L ++ HGY + L NA + YAKCG L++A
Sbjct: 347 MKANEVTILNVLPACLDKLQLRSL-KELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSA 404
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
E +F+ I ++ VSSWN LI G+ +G RKAL QM G +PD T +S+L AC+
Sbjct: 405 EKVFHGI--GDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACA 462
Query: 427 HAGLIDEGRK 436
H + G++
Sbjct: 463 HLKSLQYGKE 472
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 165/337 (48%), Gaps = 19/337 (5%)
Query: 183 ITAYEQAEKPEEALILFQKTQQEGL---LSDSVTIVSVASAVGQLGDVLKAQAVHGY-AI 238
I A + + ALIL Q Q L I + A G D+ + +H + +
Sbjct: 12 IAALCETDNLTTALILIQSHSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSD 71
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
+ D + ++ MYA CG+ +RLVFD ME ++LI WN++++GY +NG + +
Sbjct: 72 STHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVK 131
Query: 299 LF-DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
+F D + ++D +P+ T ++ AC + +LG HG +I + +D + NA++ MY
Sbjct: 132 VFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMY 191
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML-EEGVKPDHI 416
KCG +D A +F D P E N+ SWN +I + +G R + + +ML EEG+ PD +
Sbjct: 192 GKCGAVDEAMKVF-DFMP-ETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVV 249
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
T +IL C+ G +D G KL + EV MV M + G L EA QM
Sbjct: 250 TVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEA-----QM 304
Query: 477 PLPPNDS----VWGALLLACRIHGEIAANYLFQLEPE 509
N++ W ++ A + G++ N F L E
Sbjct: 305 SFVKNNNKNVVSWNTMISAFSLEGDV--NEAFNLLQE 339
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/674 (34%), Positives = 383/674 (56%), Gaps = 12/674 (1%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
+LL S + + +H+ + G A +G +I Y+ G + AR +F+ I+
Sbjct: 112 KLLVSMDLADTCLSVHAYVYKLGHQADAF-VGTALIDAYSVCGNVDAARQVFDGIYFKDM 170
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
S W M+ YA N ++L L+ MR G N++T LK+C GK VH
Sbjct: 171 VS--WTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVH 228
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G ++ + D YV AL+++Y K G+ + + F+EM DL+ W++MI+ Y Q++K +
Sbjct: 229 GCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSK 288
Query: 194 EALILFQKTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EAL LF + +Q ++ ++ T SV A L + +H + ++ + N++
Sbjct: 289 EALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNAL 348
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ +YA+CG +E + +F +++ ++WN+++ GY+Q G +AL LF M D +P
Sbjct: 349 MDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTE 408
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT ++ A L + + GR+ H I + D+ + N+++DMYAKCG +D A F+
Sbjct: 409 VTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDK 468
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ +++ SWN LI GY +HG G +AL F M + KP+ +TF +LSACS+AGL+D
Sbjct: 469 M--DKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLD 526
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+GR F M + ++P ++HY CMV +LGR+G EA +I ++P P+ VW ALL A
Sbjct: 527 KGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGA 586
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C IH G++ A + ++EP+ VL+SN+YA + +W V +R++MK K +KK
Sbjct: 587 CVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEP 646
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S +E + F D +P K ++ +E + + + AGY+PD S L DVED+++E
Sbjct: 647 GLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKE 706
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
+L HSE+LA+AFG++ + +++ KNLR+C DCH+ + +S I +R+I++RD NRF
Sbjct: 707 RLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRF 766
Query: 667 HHFEGGTCSCNDYW 680
HHF G CSC DYW
Sbjct: 767 HHFRQGVCSCGDYW 780
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 235/483 (48%), Gaps = 15/483 (3%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y +G A LF+ + + SF+ T+ + ++ + L + R G N +
Sbjct: 48 YVHFGFLEDASKLFDEMPLTNTVSFV--TLAQGFSRSHQFQRARRLLLRLFREGYEVNQF 105
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
F +LK S L VH + + G +D++V AL+D Y+ CG D +VFD +
Sbjct: 106 VFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGI 165
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+D+VSWT M+ Y + E++L+LF + + G ++ TI + + L +
Sbjct: 166 YFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGK 225
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+VHG A+ + DL + +++ +Y + G + +A+ F+ M K DLI W+ M++ Y Q+
Sbjct: 226 SVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSD 285
Query: 292 QASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
++ EAL LF M Q+S PN T ++ AC L LG + H ++ + + +
Sbjct: 286 KSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVS 345
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
NA+MD+YAKCG+++ + +F +E+N +WN +I GY G G KAL FS ML
Sbjct: 346 NALMDVYAKCGEIENSVKLFTG--STEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLD 403
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
++P +T++S+L A + ++ GR+ + K + ++DM + G + +A
Sbjct: 404 IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDAR 463
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
+M ++ W AL+ IHG L E F +M + NK V
Sbjct: 464 LTFDKMD-KQDEVSWNALICGYSIHG---------LGMEALNLFDMMQQSNSKPNKLTFV 513
Query: 531 GKL 533
G L
Sbjct: 514 GVL 516
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 179/357 (50%), Gaps = 3/357 (0%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
+S+++ +L+ N GK +H I++ G D + Q L++ Y G +D K+F
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
DEM + + VS+ + + ++ + + A L + +EG + ++ + +
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+VH Y D + +++ Y+ CGNV+ AR VFD + +D++SW M+ Y
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
+N ++LLLF +M+ +PN T + +C L + ++G+ HG + D
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ A++++Y K G++ A+ F ++ P + ++ W+++I+ Y ++ALE F +M +
Sbjct: 242 VGIALLELYTKSGEIAEAQQFFEEM-PKD-DLIPWSLMISRYAQSDKSKEALELFCRMRQ 299
Query: 409 EG-VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
V P++ TF S+L AC+ L++ G + + + K+ + V ++D+ + G
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCG 356
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 252/741 (34%), Positives = 395/741 (53%), Gaps = 91/741 (12%)
Query: 23 ASLRQ---IHSSLTTSGLINQALHL--GAKIIIKYTTYGEPNT------ARSLFNSIHND 71
S+RQ +H+ +TTSG + LH A ++ T+ P+ A SLF+ +
Sbjct: 10 GSVRQATELHALVTTSG---RLLHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRM--- 63
Query: 72 KSYSFLWNTMIRA-YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA-SNSLILEG 129
+FL++T +RA + + + LY M + +++TF F+ K CA + +L G
Sbjct: 64 PCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLG 123
Query: 130 KVVHGDIIRTGFLSD-SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV------- 181
+++H RT S + + ++ MYA+ G D + FDE SV+D+V+WT
Sbjct: 124 RMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAK 183
Query: 182 ------------------------MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
+I+ Y +A + EA+ F +G+ D VT++ +
Sbjct: 184 MGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGM 243
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD------- 270
SA GQL D+ ++H L + +++ MYA+CG+ +AR VFD
Sbjct: 244 LSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRG 303
Query: 271 -------------------------MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
ME D+I++NS++TGYI G+ EALLLF +M+
Sbjct: 304 PQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRR 363
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+ T + L++A LG+ GR H I ++ D L A++DMY KCG ++
Sbjct: 364 HGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEE 423
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A F + S R+V +W+ +I G +G G+ ALE F M +G + +T+ ++L+AC
Sbjct: 424 AMVAFKQM--SVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTAC 481
Query: 426 SHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SH+ L+DEGR F +M L +++P+++HY CM+D+LGR+G L EA D+++ MP+ PN +
Sbjct: 482 SHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVI 541
Query: 485 WGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W ++L ACR+H + AA++L +LEP +V M NIY S +W + K+R M+
Sbjct: 542 WASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEK 601
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
+G+KK A +S I + F DR +P E+ +E + +K AGY P S D
Sbjct: 602 RGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVD 661
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
V++E++E L HSEKLA+AFG+++L P V + KNLRVC DCHSA + IS ++ R+II
Sbjct: 662 VDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREII 721
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRD +RFHHF GG CSCND+W
Sbjct: 722 VRDRSRFHHFRGGVCSCNDFW 742
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/573 (37%), Positives = 341/573 (59%), Gaps = 12/573 (2%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
F + +C S S +H +I++ SD ++ LV MY K G +D ++FDEM R
Sbjct: 147 FAISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNR 203
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAV 233
DLVSW +++ L F + + E G + VT++SV SA +G + + +++
Sbjct: 204 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSL 263
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
HG + + NS++ MY + G ++ A +F+ M R L+SWNSM+ + NG A
Sbjct: 264 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYA 323
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
+ + LF+ M+ + P+ T + L+ ACT G + H YI D + A+
Sbjct: 324 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATAL 383
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+++YAK G L+ +E++F +I +R+ +W ++AGY +H GR+A++ F M++EGV+
Sbjct: 384 LNLYAKLGRLNASEDIFEEI--KDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEV 441
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDM 472
DH+TFT +LSACSH+GL++EG+K F M+++ V+P + HY+CMVD+LGR+G L +A+++
Sbjct: 442 DHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYEL 501
Query: 473 IKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKW 527
IK MP+ P+ VWGALL ACR++G + A L L+P ++++SNIY+A+ W
Sbjct: 502 IKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLW 561
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
R K+R MK + L + S IE+G I F D+++P E++ K+E + +I A
Sbjct: 562 RXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEA 621
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
G P LHD+++E + M+N HSEKLA+AFG++ + +TKNLR+C DCHS
Sbjct: 622 GCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTA 681
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+F S + +R II+RD+ RFHHF G CSC DYW
Sbjct: 682 KFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 206/419 (49%), Gaps = 11/419 (2%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+ SC ++ IH+ + S + +G +++ Y G A+ LF+ + N S
Sbjct: 149 ISSCTSVSYCSAIHARVIKSLNYSDGF-IGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVS 207
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
WN+++ + G+ L + MR SG N T V+ ACA + EGK +HG
Sbjct: 208 --WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHG 265
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+++ G + V +L++MY K G D ++F+EM VR LVSW M+ + E+
Sbjct: 266 VVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 325
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+ LF ++ G+ D T+V++ A G +A+++H Y F D+ I +++
Sbjct: 326 GMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLN 385
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
+YA+ G + + +F+ ++ RD I+W +ML GY + EA+ LFD M + + VT
Sbjct: 386 LYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVT 445
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR--NAVMDMYAKCGDLDTAENMFND 372
L+SAC++ G + G+K+ I++ +++ L + ++D+ + G L+ A +
Sbjct: 446 FTHLLSACSHSGLVEEGKKYF-EIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKS 504
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP-DHITFTSILSACSHAGL 430
+ P E + W L+ ++G+ E Q+L + P DH + + + S AGL
Sbjct: 505 M-PMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGL 560
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 152/301 (50%), Gaps = 7/301 (2%)
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+ K LL+DS+ + S+ A+ V A+H I + D I + +V+MY
Sbjct: 126 VFLGKLHNSSLLADSI-VQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMY 184
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SDCKPNPVTA 315
+ G E A+ +FD M RDL+SWNS+++G G L F M+ S +PN VT
Sbjct: 185 FKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTL 244
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
L +VSAC +G+ G+ HG ++ M A + N++++MY K G LD A +F ++
Sbjct: 245 LSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM-- 302
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
R++ SWN ++ + +G+ K ++ F+ M G+ PD T ++L AC+ GL +
Sbjct: 303 PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAE 362
Query: 436 KCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRI 494
A + + ++ ++++ + G L + D+ ++ + D++ W A+L +
Sbjct: 363 SIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEE--IKDRDTIAWTAMLAGYAV 420
Query: 495 H 495
H
Sbjct: 421 H 421
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/679 (36%), Positives = 377/679 (55%), Gaps = 84/679 (12%)
Query: 61 ARSLFNSI-HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS----GISSNSYTFPF 115
AR +F+ + + S WN+++ Y+ HC S R GI ++
Sbjct: 180 ARKVFDELCYRGICDSVTWNSIVSVYS---HCFVPNVAVSLFREMTVGYGILPDTVGVVN 236
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L C L L G+ VHG +R+G + D +V ALVDMYAKCG+ +D KVF+ M +D
Sbjct: 237 ILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKD 296
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT---------------------- 213
+V+W M+T Y Q + E+AL LF K ++E + SD VT
Sbjct: 297 VVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFR 356
Query: 214 -------------IVSVASAVGQLGDVLKAQAVHGYAIC-------NAFLEDLCIQNSIV 253
++S+ SA +G +L + H Y++ N +DL + N+++
Sbjct: 357 QMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALI 416
Query: 254 AMYARCGNVEKARLVFDMM--EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD--CK 309
MYA+C ++E AR +FD + + RD+++W M+ GY Q+G A+ AL LF EM D
Sbjct: 417 DMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIV 476
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL---RNAVMDMYAKCGDLDTA 366
PN T ++ AC L + + G++ H Y++ + +ID+ + N ++DMY+K GD+DTA
Sbjct: 477 PNDFTISCVLMACARLAALKFGKQIHAYVLRRS-RIDSDVLFVANCLIDMYSKSGDVDTA 535
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+ +F+ + S+RN SW L+ GYGMHG A F +M +E + D ITF +L ACS
Sbjct: 536 QVVFDSM--SKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACS 593
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
H+G+ V P V+HYACMVD+LGRAG L EA +I MP+ P VW
Sbjct: 594 HSGM------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWI 641
Query: 487 ALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
ALL ACRIH E AA L +L+ ++ G + L+SNIYA + +W++V ++ MK G
Sbjct: 642 ALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTG 701
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+KK +S ++ K ++ F+ DR + +++Y+ + + IK + +LHDV+
Sbjct: 702 IKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKA-------NFSLHDVD 754
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
DE++ L+ HSEKLA+A+ I+ L P A +++TKNLR+C D HSA +IS I +II+R
Sbjct: 755 DEEKGDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILR 814
Query: 662 DANRFHHFEGGTCSCNDYW 680
D++RFH F+ G+CSC YW
Sbjct: 815 DSSRFHQFKNGSCSCKGYW 833
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 264/532 (49%), Gaps = 52/532 (9%)
Query: 17 KSCNFLASLRQIHSSLTTSG-LINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+ C L + +H +G L+N ++ I ++ N L ++ S
Sbjct: 32 QQCKTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSV 91
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
+ WN +IR + L L+ M+ + + YTFPFV KAC S G +HG
Sbjct: 92 YWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGC 151
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR---DLVSWTVMITAYEQAEKP 192
+IR GF S+ +V A++ MY KC KVFDE+ R D V+W +++ Y P
Sbjct: 152 VIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVP 211
Query: 193 EEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
A+ LF++ T G+L D+V +V++ G LG L + VHG+ + + +ED+ + N+
Sbjct: 212 NVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNA 271
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD---- 307
+V MYA+CG +E A VF+ M +D+++WN+M+TGY QNG+ +AL LF +M+
Sbjct: 272 LVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESD 331
Query: 308 -------------------------------CKPNPVTALILVSACTYLGSRQLGRKFHG 336
C+PN VT + L+SAC +G+ G++ H
Sbjct: 332 VVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHC 391
Query: 337 YIINSNMK-------IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
Y + +K D + NA++DMYAKC L+ A MF++I P +R+V +W V+I G
Sbjct: 392 YSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGG 451
Query: 390 YGMHGHGRKALEFFSQM--LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS-V 446
Y HG AL+ FS+M ++ + P+ T + +L AC+ + G++ A + + S +
Sbjct: 452 YAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRI 511
Query: 447 KPEVKHYA-CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+V A C++DM ++G + A + M N W +LL +HG
Sbjct: 512 DSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMHGR 562
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/643 (34%), Positives = 363/643 (56%), Gaps = 10/643 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G +I Y+ G + AR +F+ I S W M+ YA N E+L+L++ MR
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVS--WTGMVACYAENCFYEESLQLFNQMRI 230
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
G N++T LK+C GK VHG ++ + D +V AL+++YAK G+ D
Sbjct: 231 MGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIID 290
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
++F+EM DL+ W++MI Y Q+++ +EAL LF + +Q ++ ++ T SV A
Sbjct: 291 AQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACAS 350
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ + +H + ++ + N+I+ +YA+CG +E + +F+ + R+ ++WN++
Sbjct: 351 SVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTI 410
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ GY+Q G A+ LF M D +P VT ++ A L + + G + H I +
Sbjct: 411 IVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMY 470
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
D + N+++DMYAKCG ++ A F+ + ++R+ SWN +I GY MHG +AL F
Sbjct: 471 NKDTVVANSLIDMYAKCGRINDARLTFDKM--NKRDEVSWNAMICGYSMHGMSMEALNLF 528
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGR 462
M KP+ +TF +LSACS+AGL+ +G+ F M+K +KP ++HY CMV +LGR
Sbjct: 529 DMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGR 588
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLM 517
G EA +I ++ P+ VW ALL AC IH G + A ++ ++EP VL+
Sbjct: 589 LGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLL 648
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SN+YA + +W V +R+ M+ K ++K S +E + F D +P K + +
Sbjct: 649 SNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAML 708
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
E + + + AGY+PD + L DV+D+++E L HSE+LA+A+G++ +++ KNL
Sbjct: 709 EWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNL 768
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
R+C DCH+ + IS + +R+I++RD NRFHHF G CSC DYW
Sbjct: 769 RICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 205/398 (51%), Gaps = 9/398 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MR +G F LKSC L + + +H G + L +G ++ Y G
Sbjct: 228 MRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGC-ALKGCYDHDLFVGIALLELYAKSG 286
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
E A+ LF + K+ W+ MI YA + E L+L+ MR++ + N++TF V
Sbjct: 287 EIIDAQRLFEEM--PKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASV 344
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L+ACAS+ + GK +H +++ G S+ +V A++D+YAKCG+ ++ K+F+E+ R+
Sbjct: 345 LQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND 404
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
V+W +I Y Q E A+ LF + + VT SV A L + +H
Sbjct: 405 VTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSL 464
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
I + +D + NS++ MYA+CG + ARL FD M KRD +SWN+M+ GY +G + EA
Sbjct: 465 TIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEA 524
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR-KFHGYIINSNMKIDATLRNAVMD 355
L LFD MQ++DCKPN +T + ++SAC+ G G+ F + ++K ++
Sbjct: 525 LNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVW 584
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+ + G D A + +I + +V W L+ +H
Sbjct: 585 LLGRLGRFDEAMKLIGEI-AYQPSVMVWRALLGACVIH 621
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 242/509 (47%), Gaps = 17/509 (3%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y A LF+ + + SF+ T+ + Y+ + + L + + G N +
Sbjct: 80 YVQSNSLQDASKLFDEMPQTNTISFV--TLAQGYSRDHQFHQALHFILRIFKEGHEVNPF 137
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
F +LK S L +H + + G +D++V AL+D Y+ G D VFD++
Sbjct: 138 VFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDI 197
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+D+VSWT M+ Y + EE+L LF + + G ++ TI + L +
Sbjct: 198 CCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGK 257
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+VHG A+ + DL + +++ +YA+ G + A+ +F+ M K DLI W+ M+ Y Q+
Sbjct: 258 SVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSD 317
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
++ EAL LF M+ + PN T ++ AC S LG++ H ++ + + + N
Sbjct: 318 RSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSN 377
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
A+MD+YAKCG+++ + +F ++ +RN +WN +I GY G G +A+ F+ MLE +
Sbjct: 378 AIMDVYAKCGEIENSMKLFEEL--PDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDM 435
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+P +T++S+L A + ++ G + + K + ++DM + G + +A
Sbjct: 436 QPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARL 495
Query: 472 MIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
+M ++ W A++ +HG + E F +M + NK VG
Sbjct: 496 TFDKMN-KRDEVSWNAMICGYSMHG---------MSMEALNLFDMMQHTDCKPNKLTFVG 545
Query: 532 KLREDMKNKGL--KKPAAFSVIEYGKDIQ 558
L N GL K A F + DI+
Sbjct: 546 VLSA-CSNAGLLYKGQAHFESMSKDYDIK 573
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 187/384 (48%), Gaps = 4/384 (1%)
Query: 109 NSYTFPFVLKACASNSL-ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+S+++ +L+ N + GK +H I++ G D + Q L++ Y + D K+
Sbjct: 33 DSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKL 92
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
FDEM + +S+ + Y + + +AL + +EG + ++ + +
Sbjct: 93 FDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLA 152
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+H D + +++ Y+ GNV+ AR VFD + +D++SW M+ Y
Sbjct: 153 HLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACY 212
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
+N E+L LF++M+ KPN T + +C L + +G+ HG + D
Sbjct: 213 AENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDL 272
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ A++++YAK G++ A+ +F ++ + ++ W+++IA Y ++AL+ F +M
Sbjct: 273 FVGIALLELYAKSGEIIDAQRLFEEM--PKTDLIPWSLMIARYAQSDRSKEALDLFLRMR 330
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
+ V P++ TF S+L AC+ + +D G++ + + K + V ++D+ + G +
Sbjct: 331 QTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIE 390
Query: 468 EAFDMIKQMPLPPNDSVWGALLLA 491
+ + +++P ND W +++
Sbjct: 391 NSMKLFEELP-DRNDVTWNTIIVG 413
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/635 (35%), Positives = 362/635 (57%), Gaps = 40/635 (6%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
+N I + G+ +EL + + + +Y VL+ CA I +G+ +H I
Sbjct: 71 YNIEICRFCELGNLRRAMELINQSPKPDLELRTYCS--VLQLCADLKSIQDGRRIHSIIQ 128
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
D + + LV MY CG +G ++FD+++ + W +++ Y + E+L
Sbjct: 129 SNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLS 188
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLG--DVLKAQAVHGYAICNAFLE----------- 244
LF++ ++ G+ + S +LG DV+ ++ + N E
Sbjct: 189 LFKRMRELGIRR----VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLL 244
Query: 245 -------------DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+L + N ++ MY++ GN+ A VF+ M +R ++SW SM+ GY + G
Sbjct: 245 LGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREG 304
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+ ++ LF EM+ D PN +T ++ AC L + + G++ HG+I+ + +D + N
Sbjct: 305 LSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN 364
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
A++DMY KCG L A +F+ I E+++ SW V+IAGYGMHG+G +A+ F++M G+
Sbjct: 365 ALVDMYLKCGALGLARLLFDMI--PEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGI 422
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
+PD ++F SIL ACSH+GL+DEG F M ++P+ +HYAC+VD+L RAG L +A+
Sbjct: 423 EPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAY 482
Query: 471 DMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASN 525
IK MP+ P+ ++WGALL CRI+ E A ++F+LEPE+TGY+VL++NIYA +
Sbjct: 483 KFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAE 542
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
KW EV KLRE + +GL+K S IE + F T D +P ++ ++ +K
Sbjct: 543 KWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMK 602
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
G+ P + AL +D ++E L HSEK+A+AFGI++L P V+VTKNLRVC DCH
Sbjct: 603 EEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHE 662
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+F+S + +R II+RD+NRFHHF+ G+CSC +W
Sbjct: 663 MAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 227/439 (51%), Gaps = 34/439 (7%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+ C L S+ R+IHS + ++ + + LG+K++ Y T G+ R +F+ +
Sbjct: 104 YCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGV-LGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI--------------SSNSYTFP 114
N+K FLWN ++ YA G+ E+L L+ MR GI + ++
Sbjct: 163 ANEKV--FLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWN 220
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA--------LVDMYAKCGQTDDGCK 166
++ SN L +G + ++ G +D + L+DMY+K G + +
Sbjct: 221 SMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQ 280
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
VF+ M R +VSWT MI Y + + ++ LF + ++E L +S+T+ + A L
Sbjct: 281 VFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAA 340
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ + Q +HG+ + N F D + N++V MY +CG + ARL+FDM+ ++DL+SW M+ G
Sbjct: 341 LERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 400
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y +G SEA+ F+EM+NS +P+ V+ + ++ AC++ G G F + N N I+
Sbjct: 401 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRN-NCCIE 459
Query: 347 ATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ ++D+ A+ G+L A F + P E + + W L+ G ++ H K E +
Sbjct: 460 PKSEHYACIVDLLARAGNLSKAYK-FIKMMPIEPDATIWGALLCGCRIY-HDVKLAEKVA 517
Query: 405 QMLEEGVKPDHITFTSILS 423
+ + E ++P++ + +L+
Sbjct: 518 EHVFE-LEPENTGYYVLLA 535
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/589 (40%), Positives = 345/589 (58%), Gaps = 17/589 (2%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L+K C L +L+ +H+S+ S L HL +I +Y + G + A +LF++ H+ S
Sbjct: 10 LIKQCVTLEALKSLHASILKSHL---HPHLCTSLIAQYASLGSISHAYALFSTSHS--SN 64
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
FLWN +IRA++N H +L LYS M + GI + ++TFPF+LKAC + G H
Sbjct: 65 VFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHA 124
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
++ G+ SD +V +L+ MY + G D +VF+ M R++VSW+ M+ AY + EE
Sbjct: 125 HVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEE 184
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
L+LF + EG+ + +IV+ + + + + A I N D +QN+ +
Sbjct: 185 GLLLFWRMLNEGIAPNRGSIVNAMACIHREHE---ADDFCRVVIDNGLDSDQSVQNAAMG 241
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MYARCG ++ AR F + +DL++W SM+ Y+Q AL LF +M+ P+ VT
Sbjct: 242 MYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVT 301
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
L L+ A + L S QL R HG I S K L AV+D+Y KCG+L+ A F+ +
Sbjct: 302 LLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRM- 360
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
S RN+ SW+ +I+GYGMHGHGR+AL F QM + +KPDHI F +LSACSH GLI EG
Sbjct: 361 -SARNLISWSTMISGYGMHGHGREALCLFDQM-KASIKPDHIAFVMVLSACSHGGLIAEG 418
Query: 435 RKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
+CF M + V P +HYACMVD+LGRAG L EA I++MP+ P+ VWGALL ACR
Sbjct: 419 WECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACR 478
Query: 494 IH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
IH E AA +LF L+ E+ G ++L+SNIYA+S K +E +R MK++G++K
Sbjct: 479 IHSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTVGH 538
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
++IE + F D NP +Y ++ + I+ AGY+PDLS L
Sbjct: 539 TIIEIKNKVYTFVAGDTSNPQTDLIYSELRKLMDRIQEAGYVPDLSFKL 587
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 202/401 (50%), Gaps = 19/401 (4%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M +LG F + LLK+C LA + H+ + G + + ++ Y +G
Sbjct: 91 MLQLGIQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESDVF-VANSLMAMYGRFG 149
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+ +R +F + S W++M+ AYA+NG E L L+ M GI+ N + +
Sbjct: 150 CFDFSRQVFERMPERNVVS--WSSMVGAYAHNGRYEEGLLLFWRMLNEGIAPNRGS---I 204
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ A A E +I G SD VQ A + MYA+CG+ D + F + +DL
Sbjct: 205 VNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARRFFYGILDKDL 264
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
V+WT MI AY QA+ P AL LF++ + G++ DSVT++S+ AV L A+ VHG
Sbjct: 265 VAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQLARFVHGV 324
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ F + + +++ +Y +CGN+E AR FD M R+LISW++M++GY +G EA
Sbjct: 325 ITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGREA 384
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN----A 352
L LFD+M+ S KP+ + ++++SAC++ G G + + N T R
Sbjct: 385 LCLFDQMKAS-IKPDHIAFVMVLSACSHGGLIAEGWECFKAM---NRDFGVTPRTEHYAC 440
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
++D+ + G L A+ F + P + W L+ +H
Sbjct: 441 MVDLLGRAGRLSEAQ-AFIERMPITPDAGVWGALLGACRIH 480
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/618 (37%), Positives = 350/618 (56%), Gaps = 19/618 (3%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W MI G E + + M SG S+ +T V ACA + GK +H I
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 138 RTGFLSDSYVQAALVDMYAKC---GQTDDGCKVFDEMSVRDLVSWTVMITAY-EQAEKPE 193
R+G + D V+ +LVDMYAKC G DD KVFD M ++SWT +IT Y +
Sbjct: 297 RSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 194 EALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EA+ LF + +G + + T S A G L D + V G A + + NS+
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
++M+ + +E A+ F+ + +++L+S+N+ L G +N +A L E+ + +
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T L+S +GS + G + H ++ + + + NA++ MY+KCG +DTA +FN
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ RNV SW +I G+ HG + LE F+QM+EEGVKP+ +T+ +ILSACSH GL+
Sbjct: 535 ME--NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG + F M + +KP+++HYACMVD+L RAG L +AF+ I MP + VW L A
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CR+H G++AA + +L+P ++ +SNIYA + KW E ++R MK + L K
Sbjct: 653 CRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S IE G I F+ D +P ++Y +++ + EIK GY+PD LH +E+E+ E
Sbjct: 713 GCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDE 772
Query: 607 ----HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+L HSEK+AVAFG+++ + V+V KNLRVC DCH+A ++IS + R+I++RD
Sbjct: 773 AEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRD 832
Query: 663 ANRFHHFEGGTCSCNDYW 680
NRFHHF+ G CSCNDYW
Sbjct: 833 LNRFHHFKDGKCSCNDYW 850
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 151/556 (27%), Positives = 271/556 (48%), Gaps = 27/556 (4%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P + LLKSC R +H+ L + ++ L +I Y+ G+ A
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV-LYNSLISLYSKSGDSAKAE 117
Query: 63 SLFNSIHN-DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
+F ++ K W+ M+ Y NNG ++ ++++ G+ N Y + V++AC+
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 122 SNSLILEGKVVHGDIIRTG-FLSDSYVQAALVDMYAKCGQT-DDGCKVFDEMSVRDLVSW 179
++ + G+V G +++TG F SD V +L+DM+ K + ++ KVFD+MS ++V+W
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW 237
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
T+MIT Q P EA+ F G SD T+ SV SA +L ++ + +H +AI
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR 297
Query: 240 NAFLEDLCIQNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNSMLTGYIQN-GQASE 295
+ ++D ++ S+V MYA+C G+V+ R VFD ME ++SW +++TGY++N A+E
Sbjct: 298 SGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATE 355
Query: 296 ALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
A+ LF EM +PN T AC L ++G++ G + ++++ N+V+
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVI 415
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
M+ K ++ A+ F + SE+N+ S+N + G + + +A + S++ E +
Sbjct: 416 SMFVKSDRMEDAQRAFESL--SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
TF S+LS ++ G I +G + + + KL + ++ M + G + A +
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 475 QMPLPPNDSVWGALLLACRIHG-EIAANYLFQ------LEPEHTGYFVLM---SNIYAAS 524
M N W +++ HG I F ++P Y ++ S++ S
Sbjct: 534 FME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 525 NKWREVGKLREDMKNK 540
WR + ED K K
Sbjct: 593 EGWRHFNSMYEDHKIK 608
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 179/360 (49%), Gaps = 15/360 (4%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISS-NSYTFPFVLKACASNSLILEGKVVHGDII 137
+ +I + N G + M R GI +S TF +LK+C GK+VH +I
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM---SVRDLVSWTVMITAYEQAEKPEE 194
DS + +L+ +Y+K G + VF+ M RD+VSW+ M+ Y + +
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIV 253
A+ +F + + GL+ + +V A V + G+ + E D+C+ S++
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 254 AMYARCGN-VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
M+ + N E A VFD M + ++++W M+T +Q G EA+ F +M S + +
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC---GDLDTAENM 369
T + SAC L + LG++ H + I S + D + +++DMYAKC G +D +
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKV 327
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGH-GRKALEFFSQMLEEG-VKPDHITFTSILSACSH 427
F+ + + +V SW LI GY + + +A+ FS+M+ +G V+P+H TF+S AC +
Sbjct: 328 FDRME--DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKP-NPVTALILVSACTYLGSRQLGRKFHGYII 339
+ ++ ++ G A+ D M +P + VT L+ +C +LG+ H +I
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP-SERNVSSWNVLIAGYGMHGHGRK 398
+++ D+ L N+++ +Y+K GD AE++F + +R+V SW+ ++A YG +G
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMV 457
A++ F + LE G+ P+ +T+++ ACS++ + GR + K + +V ++
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 458 DMLGRA----GCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
DM + Y+ FD + ++ N W ++ C
Sbjct: 210 DMFVKGENSFENAYKVFDKMSEL----NVVTWTLMITRC 244
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 255/726 (35%), Positives = 407/726 (56%), Gaps = 83/726 (11%)
Query: 25 LRQIHSSLTTSGLINQALH---LGAKIIIKYTTY--GEPNTARSLFNSIHNDKSYSFLWN 79
LRQ+H+ + I+ +LH ++I + T P+ LFNS N + F
Sbjct: 17 LRQLHAQI-----IHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVF--T 69
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF---------------VLK------ 118
+M+R Y++ + + +Y M+ G+ +++ +P VLK
Sbjct: 70 SMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVLKLGHGSD 129
Query: 119 ACASNSLI---------------------LEGKVVHGDIIRTGFLS-DSYVQA------- 149
A N++I E KV + + +G+ +S QA
Sbjct: 130 AFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVM 189
Query: 150 ---------ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
A+V YAK + + FD M R +VSW M++ Y Q EEAL LF
Sbjct: 190 PERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFD 249
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ G+ D T V+V SA GD A ++ + ++ +++ MYA+ G
Sbjct: 250 EMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFG 309
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CKPNPVTALILV 319
+++ AR +F+ M R++++WNSM+ GY QNGQ++ A+ LF EM + P+ VT + ++
Sbjct: 310 DLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVI 369
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
SAC +LG+ +LG ++ + +K+ + NA++ MY++CG ++ A+ +F ++ + R+
Sbjct: 370 SACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM--ATRD 427
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V S+N LI+G+ HGHG +A+ S M E G++PD +TF +L+ACSHAGL++EGRK F
Sbjct: 428 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 487
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH---- 495
+ P + HYACMVD+LGR G L +A +++MP+ P+ V+G+LL A RIH
Sbjct: 488 SIKD----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVE 543
Query: 496 -GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
GE+AAN LF+LEP+++G F+L+SNIYA++ +W++V ++RE MK G+KK +S +EYG
Sbjct: 544 LGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYG 603
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+ F ADR + ++Y+ + + +++ AGY+ D SC L DVE+E++E ++ HSE
Sbjct: 604 GKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSE 663
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+ + ++ AV++V KNLRVC DCH+A + IS + R IIVRD NRFH F G C
Sbjct: 664 KLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLC 723
Query: 675 SCNDYW 680
SC DYW
Sbjct: 724 SCKDYW 729
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 30/291 (10%)
Query: 216 SVASAVGQLGDV--LKAQAVHG----YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
S+AS VG + L AQ +H + A L + C + Y L+F
Sbjct: 6 SIASRVGNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTH--------LLF 57
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+ ++ + SML Y ++ +L++++MQ +P+ IL+ + G+
Sbjct: 58 NSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSA---GTGG 114
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
+G FH +++ DA +RNAV+DMYA+ G + A +F++I ER V+ WN +++G
Sbjct: 115 IG--FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSG 172
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
Y +A F M E V IT+T++++ + ++ R+ F M + SV
Sbjct: 173 YWKWESEGQAQWLFDVMPERNV----ITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS- 227
Query: 450 VKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ M+ + G EA FD + + P+++ W ++ AC G+
Sbjct: 228 ---WNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGD 275
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/514 (43%), Positives = 312/514 (60%), Gaps = 39/514 (7%)
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
GLL D+ T+ V + L V + VHG + D + S++ MY +CG + A
Sbjct: 102 GLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDA 161
Query: 266 RLVFD-------------------------------MMEKRDLISWNSMLTGYIQNGQAS 294
R +FD ME R+++SW +M++GY QNG A
Sbjct: 162 RKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAE 221
Query: 295 EALLLFDEM--QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
+AL LFDEM S+ KPN VT + ++ AC + + GR+ H + + ++++++ A
Sbjct: 222 QALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTA 281
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
+ MYAKC L A F+ I + +N+ +WN +I Y HG G +A+ F ML GV+
Sbjct: 282 LAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQ 341
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFD 471
PD +TF +LS CSH+GLID G F DM + SV+P V+HYAC+VD+LGRAG L EA +
Sbjct: 342 PDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKE 401
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
+I QMP+ SVWGALL ACR H E+AA LF LEP+++G +VL+SN+YA +
Sbjct: 402 LISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGM 461
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W EV KLR +K +G+KK S IE F AD+ +P KE+YK +E++ +IKM
Sbjct: 462 WEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKM 521
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
AGY+PD S LHD+ +E++E+ L HSEKLA+AFG++N P V++VTKNLR+C DCH+A
Sbjct: 522 AGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAA 581
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+FIS IY R+IIVRD NRFH F+ G+CSC DYW
Sbjct: 582 TKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 172/336 (51%), Gaps = 39/336 (11%)
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
LE Y+ M G+ +++T PFVLK+CA S + G+ VHG +R G D YV A+L+DM
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 155 YAKCGQTDDGCKVFDEMSVRDL-------------------------------VSWTVMI 183
Y KCG D K+FD+M VRD+ VSWT MI
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 184 TAYEQAEKPEEALILFQKTQQEG--LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+ Y Q E+AL LF + Q+G + + VTIVSV A Q + + + +H +A
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK--RDLISWNSMLTGYIQNGQASEALLL 299
+ +Q ++ MYA+C ++ +AR FDM+ + ++LI+WN+M+T Y +G EA+ +
Sbjct: 272 LHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSI 331
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMY 357
F+ M + +P+ VT + L+S C++ G G H + + ++ + + V+D+
Sbjct: 332 FENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLN-HFNDMGTIHSVEPRVEHYACVVDLL 390
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+ G L A+ + + + P + S W L+A H
Sbjct: 391 GRAGRLVEAKELISQM-PMQAGPSVWGALLAACRSH 425
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 36 GLINQALHLGAKIIIK-----------YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
G+I A L K+I++ Y GE A LF + + S W MI
Sbjct: 156 GVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVS--WTAMISG 213
Query: 85 YANNGHCVETLELYSTMRRSG--ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL 142
Y NG + L L+ M + G + N T VL ACA ++ + G+ +H G
Sbjct: 214 YTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLH 273
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSV--RDLVSWTVMITAYEQAEKPEEALILFQ 200
+S VQ AL MYAKC + FD ++ ++L++W MITAY EA+ +F+
Sbjct: 274 LNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFE 333
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLG 225
+ G+ D+VT + + S G
Sbjct: 334 NMLRAGVQPDAVTFMGLLSGCSHSG 358
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR F+ I + WNTMI AYA++G VE + ++ M R+G+ ++ TF +L C
Sbjct: 295 ARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGC 354
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQ--AALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
+ + LI G + H + + T + V+ A +VD+ + G+ + ++ +M ++ S
Sbjct: 355 SHSGLIDAG-LNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPS 413
Query: 179 -WTVMITA------YEQAEKPEEALILFQKTQQEG--LLSDSVTIVSVASAVGQLGDVLK 229
W ++ A E AE L + + LLS+ + V +L +LK
Sbjct: 414 VWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLK 473
Query: 230 AQAVHGYAICN 240
Q + C+
Sbjct: 474 YQGMKKSPGCS 484
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/578 (37%), Positives = 351/578 (60%), Gaps = 11/578 (1%)
Query: 83 RAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL 142
++ ++ G + L+L ++R + + + +LK C + +G++VH ++ + FL
Sbjct: 63 KSQSDGGTGLYALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFL 119
Query: 143 SDSYV-QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+ V Q +V+MYAKCG DD ++FDEM +D+V+WT +I + Q +P +AL+LF +
Sbjct: 120 DNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQ 179
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ GL + T+ S+ A G + +H + + + + + +++V MYARCG+
Sbjct: 180 MLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGH 239
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
++ A+L FD M + +SWN++++G+ + G+ AL L +MQ + +P T + SA
Sbjct: 240 MDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSA 299
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C +G+ + G+ H ++I S +K+ A + N ++DMYAK G +D A+ +F+ + + +V
Sbjct: 300 CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL--VKPDVV 357
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SWN ++ G HG G++ L+ F QML G++P+ I+F +L+ACSH+GL+DEG F M
Sbjct: 358 SWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM 417
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
K V+P+V HY VD+LGR G L A I++MP+ P +VWGALL ACR+H G
Sbjct: 418 KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELG 477
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
AA F+L+P +G +L+SNIYA++ +WR+V K+R+ MK G+KK A S +E
Sbjct: 478 VYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENA 537
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F D +P KE+ K E ++ +IK GY+PD S L V+ ++RE L YHSEKL
Sbjct: 538 VHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKL 597
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
A+AF ++N + +++ KN+RVC DCH+A +F+S IY
Sbjct: 598 ALAFALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKIY 635
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 190/386 (49%), Gaps = 6/386 (1%)
Query: 11 FYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
Y +LLK C L + Q +H+ L S ++ L L I+ Y G + AR +F+
Sbjct: 89 LYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDE 148
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ + W +I ++ N + L L+ M R G+ N +T +LKA S +
Sbjct: 149 MPTKDMVT--WTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLD 206
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +H ++ G+ S YV +ALVDMYA+CG D FD M + VSW +I+ +
Sbjct: 207 PGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHA 266
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ + E AL L K Q++ T SV SA +G + + + VH + I +
Sbjct: 267 RKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAF 326
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
I N+++ MYA+ G+++ A+ VFD + K D++SWN+MLTG Q+G E L F++M
Sbjct: 327 IGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIG 386
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+PN ++ L +++AC++ G G + + ++ D +D+ + G LD AE
Sbjct: 387 IEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAE 446
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMH 393
++ P E + W L+ MH
Sbjct: 447 RFIREM-PIEPTAAVWGALLGACRMH 471
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/620 (36%), Positives = 375/620 (60%), Gaps = 37/620 (5%)
Query: 81 MIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
M+R Y++ + + +Y M+ G+ +++ +P ++K+ + G H +++ G
Sbjct: 1 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTG-----GIGFHAHVLKLG 55
Query: 141 FLSDSYVQAALVDMYA--------------KCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
SD++V+ A++DMYA K +FD M R++++WT M+T Y
Sbjct: 56 HGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGY 115
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ + E A F + ++S + + S Q G L +A+ + +
Sbjct: 116 AKVKDLEAARRYFDCMPERSVVSWNAML----SGYAQNG--LAEEALRLFDEMLGAYRNS 169
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
N++++ Y R G+++ AR +F+ M R++++WNSM+ GY QNGQ++ A+ LF EM +
Sbjct: 170 VTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA 229
Query: 307 D-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
P+ VT + ++SAC +LG+ +LG ++ + +K+ + NA++ MY++CG ++
Sbjct: 230 KKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMED 289
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A+ +F ++ + R+V S+N LI+G+ HGHG +A+ S M E G++PD +TF +L+AC
Sbjct: 290 AKRVFQEM--ATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTAC 347
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
SHAGL++EGRK F + P + HYACMVD+LGR G L +A +++MP+ P+ V+
Sbjct: 348 SHAGLLEEGRKVFESIKD----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVY 403
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
G+LL A RIH GE+AAN LF+LEP+++G F+L+SNIYA++ +W++V ++RE MK
Sbjct: 404 GSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKG 463
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK +S +EYG + F ADR + ++Y+ + + +++ AGY+ D SC L DV
Sbjct: 464 GVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDV 523
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E+E++E ++ HSEKLA+ + ++ AV++V KNLRVC DCH+A + IS + R IIV
Sbjct: 524 EEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIV 583
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD NRFH F G CSC DYW
Sbjct: 584 RDNNRFHCFNDGLCSCKDYW 603
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 38/274 (13%)
Query: 22 LASLRQIHSSLTTSGLINQALHL-----GA--------KIIIKYTTYGEPNTARSLFNSI 68
+ S + S +GL +AL L GA +I Y G+ ++AR LFN++
Sbjct: 136 VVSWNAMLSGYAQNGLAEEALRLFDEMLGAYRNSVTWNAMISAYMRVGDLDSARKLFNTM 195
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACAS-NSLI 126
+ WN+MI YA NG +EL+ M ++ + T V+ AC +L
Sbjct: 196 PGRNVVT--WNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALE 253
Query: 127 LEGKVVHGDIIRTGFLSDSYVQA------ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
L VV FL+++ ++ A++ MY++CG +D +VF EM+ RD+VS+
Sbjct: 254 LGNWVVR-------FLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYN 306
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I+ + EA+ L ++ G+ D VT + V +A G + + + V
Sbjct: 307 TLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVF------ 360
Query: 241 AFLEDLCIQN--SIVAMYARCGNVEKARLVFDMM 272
++D I + +V + R G +E A+ + M
Sbjct: 361 ESIKDPAIDHYACMVDLLGRVGELEDAKRTMERM 394
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/647 (35%), Positives = 367/647 (56%), Gaps = 14/647 (2%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
+++ +I Y G A +F S+ S WNT++ N + L + M
Sbjct: 283 VYVANALIAMYAKCGRMEDAERVFASMLCRDYVS--WNTLLSGLVQNELYRDALNYFRDM 340
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
+ S + + ++ A + +L GK VH IR G S+ + L+DMYAKC
Sbjct: 341 QNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCV 400
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
F+ M +DL+SWT +I Y Q E EA+ LF+K Q +G+ D + I SV A
Sbjct: 401 KHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRAC 460
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L + +HGY + L D+ +QN+IV +Y G+ + AR F+ + +D++SW
Sbjct: 461 SGLKSRNFIREIHGY-VFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWT 519
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
SM+T + NG EAL LF ++ ++ +P+ + + +SA L S + G++ HG++I
Sbjct: 520 SMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK 579
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
++ + ++++DMYA CG ++ + MF+ + +R++ W +I GMHG G +A+
Sbjct: 580 GFFLEGPIASSLVDMYACCGTVENSRKMFHSV--KQRDLILWTSMINANGMHGCGNEAIA 637
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDML 460
F +M +E V PDHITF ++L ACSH+GL+ EG++ F M ++P +HYACMVD+L
Sbjct: 638 LFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLL 697
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
R+ L EA+ ++ MP+ P+ VW ALL AC IH GE+AA L Q + +++G +
Sbjct: 698 SRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYA 757
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
L+SNI+AA +W +V ++R MK GLKK S IE I F D+ +P ++Y
Sbjct: 758 LISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYL 817
Query: 576 KVESMAVEI-KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV-VQV 633
K+ + K GY+ H+V +E++ ML HSE+LA+ +G++ +TP+ +++
Sbjct: 818 KLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLL-VTPKGTSIRI 876
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
TKNLR+C+DCH+ F+ S + +R ++VRDANRFHHFE G CSC D+W
Sbjct: 877 TKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 217/403 (53%), Gaps = 9/403 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ L S L + L K++ Y G A +F+ + + F WN M+ A+
Sbjct: 66 QQLHARLLKSHL---SAFLATKLLHMYEKCGSLKDAVKVFDEM--TERTIFTWNAMMGAF 120
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
++G +E +ELY MR G++ ++ TFP VLKAC + G +HG ++ GF
Sbjct: 121 VSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFV 180
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDE--MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
+V AL+ MY KCG +FD M D VSW +I+A+ K EAL LF++ Q
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQ 240
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+ G+ S++ T V+ V V +HG A+ + D+ + N+++AMYA+CG +E
Sbjct: 241 EVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRME 300
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
A VF M RD +SWN++L+G +QN +AL F +MQNS KP+ V+ L L++A
Sbjct: 301 DAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASG 360
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
G+ G++ H Y I + + + + N ++DMYAKC + F +H E+++ SW
Sbjct: 361 RSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMH--EKDLISW 418
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+IAGY + +A+ F ++ +G+ D + S+L ACS
Sbjct: 419 TTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 197/376 (52%), Gaps = 6/376 (1%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
++L L ST + S + +L C + + +G+ +H ++++ +++ L+
Sbjct: 29 QSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLL 86
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
MY KCG D KVFDEM+ R + +W M+ A+ + K EA+ L+++ + G+ D+
Sbjct: 87 HMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDAC 146
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD-- 270
T SV A G LG+ +HG A+ F E + + N+++AMY +CG++ AR++FD
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGI 206
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
MMEK D +SWNS+++ ++ G+ EAL LF MQ N T + + +L
Sbjct: 207 MMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKL 266
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G HG + SN D + NA++ MYAKCG ++ AE +F + R+ SWN L++G
Sbjct: 267 GMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLC--RDYVSWNTLLSGL 324
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+ R AL +F M KPD ++ ++++A +G + G++ A + + +
Sbjct: 325 VQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNM 384
Query: 451 KHYACMVDMLGRAGCL 466
+ ++DM + C+
Sbjct: 385 QIGNTLIDMYAKCCCV 400
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/626 (35%), Positives = 357/626 (57%), Gaps = 43/626 (6%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
E +EL + R+ ++ + ++ AC + + G+ VH + F+ ++ L+
Sbjct: 73 EAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLL 129
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY------EQAEK--------------- 191
DMYAKCG D +FDEM RDL SW MI Y EQA K
Sbjct: 130 DMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNA 189
Query: 192 ----------PEEALILFQKTQQ-EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
P EAL LF+ Q+ E S+ T+ S +A + + + +HGY I
Sbjct: 190 AISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRT 249
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
D + ++++ +Y +CG++++AR +FD M+ RD++SW +M+ ++G+ E LLF
Sbjct: 250 ELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLF 309
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
++ S +PN T +++AC + LG++ HGY++++ + +A++ MY+KC
Sbjct: 310 RDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKC 369
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G+ A +FN++H + ++ SW LI GY +G +AL FF +L+ G KPD +T+
Sbjct: 370 GNTRVARRVFNEMH--QPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVG 427
Query: 421 ILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSAC+HAGL+D+G + F + K + HYAC++D+L R+G EA ++I MP+
Sbjct: 428 VLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVK 487
Query: 480 PNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P+ +W +LL CRIHG + AA L+++EPE+ ++ ++NIYA + W EV +R
Sbjct: 488 PDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVR 547
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
+DM N G+ K S IE + + F D +P ++++ + ++ +IK GY+PD +
Sbjct: 548 KDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTN 607
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
LHDVE+E +E L YHSEKLAV FGI++ P ++V KNLR C DCH+A ++IS I
Sbjct: 608 FVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIV 667
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
+RKI VRD+NRFH FE G+CSC DYW
Sbjct: 668 QRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 206/406 (50%), Gaps = 10/406 (2%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR-SGI 106
+I+ Y G AR LF+ + ++S WN I Y + E LEL+ M+R
Sbjct: 159 MIVGYAKLGRLEQARKLFDEMPQRDNFS--WNAAISGYVTHNQPREALELFRVMQRHERS 216
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
SSN +T L A A+ + GK +HG +IRT D V +AL+D+Y KCG D+
Sbjct: 217 SSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARG 276
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD+M RD+VSWT MI + + EE +LF+ Q G+ + T V +A
Sbjct: 277 IFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAA 336
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ VHGY + + +++V MY++CGN AR VF+ M + DL+SW S++ G
Sbjct: 337 EHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVG 396
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKI 345
Y QNGQ EAL F+ + S KP+ VT + ++SACT+ G G + FH +
Sbjct: 397 YAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 456
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
A V+D+ A+ G AEN+ +++ P + + W L+ G +HG+ A
Sbjct: 457 TADHYACVIDLLARSGRFKEAENIIDNM-PVKPDKFLWASLLGGCRIHGNLELAKRAAKA 515
Query: 406 MLEEGVKPDH-ITFTSILSACSHAGLIDEGRKCFADMTKLSV--KP 448
+ E ++P++ T+ ++ + ++AGL E DM + + KP
Sbjct: 516 LYE--IEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKP 559
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 129/263 (49%), Gaps = 5/263 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++IH L + L N + + ++ Y G + AR +F+ + + S W TMI
Sbjct: 240 KEIHGYLIRTEL-NLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVS--WTTMIHRC 296
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+G E L+ + +SG+ N YTF VL ACA ++ GK VHG ++ G+ S
Sbjct: 297 FEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGS 356
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ +ALV MY+KCG T +VF+EM DLVSWT +I Y Q +P+EAL F+ Q
Sbjct: 357 FAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQS 416
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKA-QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G D VT V V SA G V K + H + + ++ + AR G ++
Sbjct: 417 GTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKE 476
Query: 265 ARLVFDMME-KRDLISWNSMLTG 286
A + D M K D W S+L G
Sbjct: 477 AENIIDNMPVKPDKFLWASLLGG 499
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/723 (33%), Positives = 398/723 (55%), Gaps = 52/723 (7%)
Query: 6 PSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
PS + LLK+C L L Q+H+ LT GL A ++ Y G A
Sbjct: 49 PSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFS-AAALVDAYGKCGHAYYAA 107
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-------RSGISSNSYTFPF 115
+F+ + W +I AY++NG E + + MR + +
Sbjct: 108 QVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGA 167
Query: 116 VLKACA---SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
++ ACA ++ + G VHG +++ GF +++ ++V MY+ C +VF+ +
Sbjct: 168 LVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIP 227
Query: 173 V--RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS---DSVTIVSVASAVGQLGDV 227
+ RD+VSW +I+ + + E AL F+ EG + + VT++++ + +LG V
Sbjct: 228 IEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCV 287
Query: 228 LKAQAVHGYAICN----AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ VH Y +D+ + +++ M+ARCGN+ AR +FD +E ++++ W++M
Sbjct: 288 ETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAM 347
Query: 284 LTGYIQNGQASEALLLFDEM------QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
+ GY Q EAL LF +M + KPN VT + +++AC+ LG+ + H Y
Sbjct: 348 IAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKY 407
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ + + DA + +A++DM AKCGD++ +F+++ S R V SW+ +I G+HG G+
Sbjct: 408 AVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGK 467
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACM 456
+ALE FS+M G +P+ IT+ S+LSACSHAGL+++G+ CF M K + P KHYAC+
Sbjct: 468 RALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACL 527
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHT 511
VD+LGRAG L EA ++I MP+ + ++WG+LL AC +H GEI + L+
Sbjct: 528 VDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSV 587
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G+ VL++N+Y + +W +V ++R +++ GL+K S IE G ++ F DR +P +
Sbjct: 588 GHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESE 647
Query: 572 EVYKKVESMAVEI-KMAGYMPDLSCALHDVEDEDREHML---NYHSEKLAVAFGIM---- 623
+YK+++ + + K A Y+ + +VED D ++ YHSE+LA+AFG++
Sbjct: 648 MIYKELDGLDERVRKAAKYVTETGL---NVEDGDIAGLILRCKYHSERLAIAFGLIMIDR 704
Query: 624 ------NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+L +++TKNLRVC DCH+ + +S + R++IVRDA+RFHHF G CSC
Sbjct: 705 HSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCG 764
Query: 678 DYW 680
DYW
Sbjct: 765 DYW 767
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 227/451 (50%), Gaps = 31/451 (6%)
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+F WN++I A L ++ M+ + SN++TFP +LKACA+ +L VH
Sbjct: 18 TFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHA 76
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKP 192
+ R G +D + AALVD Y KCG +VFDEM D+VSWT +I+AY
Sbjct: 77 YLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCV 136
Query: 193 EEALILFQKTQ----QEGLLSDSVTIVSV-----ASAVGQLGDVL-KAQAVHGYAICNAF 242
+EA F + + +G V +VS+ A AVG + L + AVHG + F
Sbjct: 137 DEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGF 196
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFD--MMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ NS+V MY+ C +V A VF+ +E+RD++SWNS+++G+ NG+A AL F
Sbjct: 197 GVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTF 256
Query: 301 DEM---QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI----DATLRNAV 353
++M S +PN VT + L+ +C LG + H YI + + + D + A+
Sbjct: 257 EDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTAL 316
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG--- 410
+DM+A+CG+L A +F+ + +NV W+ +IAGY +AL F QML EG
Sbjct: 317 LDMHARCGNLALAREIFDGVEG--KNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMV 374
Query: 411 ---VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
VKP+ +T S+++ACS G + + + + ++DM + G +
Sbjct: 375 GVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIE 434
Query: 468 EAFDMIKQMPLPPNDSV-WGALLLACRIHGE 497
+ +M V W +++ A IHGE
Sbjct: 435 HGRQVFSEMDESTRTVVSWSSMIGAEGIHGE 465
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/663 (33%), Positives = 373/663 (56%), Gaps = 18/663 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ + +GL ++ + + +I Y G AR LF+ + WN+MI YA
Sbjct: 219 QVHTVVVKNGL-DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT--WNSMISGYA 275
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG +E L ++ +MR + + + +F ++K CA+ + + +H +++ GF+ D
Sbjct: 276 ANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQN 335
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMS-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL+ Y+KC D ++F E + ++VSWT MI+ + Q + EEA+ LF + +++
Sbjct: 336 IRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRK 395
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + T + +A+ V+ VH + + + +++ Y + G V++A
Sbjct: 396 GVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEA 451
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT-Y 324
VF ++ +D+++W++ML GY Q G+ A+ +F E+ KPN T +++ C
Sbjct: 452 AKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAAT 511
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
S G++FHG+ I S + + +A++ MYAK G +++AE +F E+++ SWN
Sbjct: 512 TASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFK--RQREKDLVSWN 569
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
+I+GY HG KAL+ F +M + VK D +TF + +AC+HAGL++EG K F M +
Sbjct: 570 SMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRD 629
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
+ P +H +CMVD+ RAG L +A +I MP ++W +L ACR+H G +
Sbjct: 630 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRL 689
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
AA + + PE + +VL+SN+YA S W+E K+R+ M + +KK +S IE
Sbjct: 690 AAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 749
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F DR +P ++Y K+E ++ +K GY PD S L D++DE +E +L HSE+LA+
Sbjct: 750 AFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAI 809
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG-GTCSCN 677
AFG++ + + + KNLRVC DCH + I+ I R+I+VRD+NRFHHF G CSC
Sbjct: 810 AFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCG 869
Query: 678 DYW 680
D+W
Sbjct: 870 DFW 872
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 181/347 (52%), Gaps = 1/347 (0%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
+ +++ ++ +G E L+ ++ G+ + F VLK A+ L G+ +H I
Sbjct: 65 YTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI 124
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ GFL D V +LVD Y K DG VFDEM R++V+WT +I+ Y + EE L
Sbjct: 125 KFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLT 184
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF + Q EG +S T + + + G + VH + N + + + NS++ +Y
Sbjct: 185 LFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 244
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CGNV KAR++FD E + +++WNSM++GY NG EAL +F M+ + + + +
Sbjct: 245 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFAS 304
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ C L + + H ++ D +R A+M Y+KC + A +F +
Sbjct: 305 IIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKET-GFL 363
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
NV SW +I+G+ + +A+ FS+M +GV+P+ T++ IL+A
Sbjct: 364 GNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA 410
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 131/261 (50%), Gaps = 2/261 (0%)
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD+ RD S+T ++ + + + +EA LF Q G+ D SV L D
Sbjct: 53 LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCD 112
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
L + +H I FL+D+ + S+V Y + N + R VFD M++R++++W ++++G
Sbjct: 113 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISG 172
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y +N E L LF MQ+ +PN T + G G + H ++ + +
Sbjct: 173 YARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 232
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ N+++++Y KCG++ A +F+ ++V +WN +I+GY +G +AL F M
Sbjct: 233 IPVSNSLINLYLKCGNVRKARILFDKTEV--KSVVTWNSMISGYAANGLDLEALGMFYSM 290
Query: 407 LEEGVKPDHITFTSILSACSH 427
V+ +F SI+ C++
Sbjct: 291 RLNHVRLSESSFASIIKLCAN 311
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 136/291 (46%), Gaps = 18/291 (6%)
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN----SDCKPNPVTALILVSACT 323
+FD RD S+ S+L G+ ++G+ EA LF +Q+ DC + ++++ VSA
Sbjct: 53 LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDC--SIFSSVLKVSAT- 109
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L GR+ H I D ++ +++D Y K + N+F+++ ERNV +W
Sbjct: 110 -LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEM--KERNVVTW 166
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
LI+GY + + L F +M +EG +P+ TF + L + G+ G + + K
Sbjct: 167 TTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 226
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYL 503
+ + ++++ + G + +A + + + + W +++ AAN L
Sbjct: 227 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVVTWNSMISG------YAANGL 279
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
LE Y + ++++ + + + + KL ++K + SV++YG
Sbjct: 280 -DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYG 329
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/591 (37%), Positives = 351/591 (59%), Gaps = 24/591 (4%)
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
S S +L C+ L+ +GK VHG + + GF V +++DMY+KCG + +V
Sbjct: 2 SESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARV 61
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD------SVTIVSVASAV 221
F+ + VR+++SW MI Y EEAL LF++ +++G + D S+ S A A
Sbjct: 62 FNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAA 121
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
G+ + A HG+ +L + ++V +Y +C + +AR VFD +E++ ++SW+
Sbjct: 122 GEGMQIHAALIRHGFP----YLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWS 177
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+++ GY Q EA+ LF E++ S + + ++ + G++ H Y I
Sbjct: 178 TLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKV 237
Query: 342 NMKI-DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ + ++ N+V+DMY KCG A+ +F ++ ERNV SW V+I GYG HG G KA+
Sbjct: 238 PYGLLEMSVANSVLDMYMKCGLTVEADALFREM--LERNVVSWTVMITGYGKHGIGNKAV 295
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDM 459
E F++M E G++PD +T+ ++LSACSH+GLI EG+K F+ + + +KP+V+HYACMVD+
Sbjct: 296 ELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDL 355
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYF 514
LGR G L EA ++I++MPL PN +W LL CR+HG++ L + E + +
Sbjct: 356 LGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANY 415
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
V++SN+YA + W+E K+RE +K KGLKK A S +E K+I F+ D ++P +E++
Sbjct: 416 VMVSNMYAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIH 475
Query: 575 KKVESMAVEIKMA-GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI----MNLTPEA 629
+ ++ M +K GY+ ++ +LHDVE+E + L HSEKLA+ + + L E
Sbjct: 476 EVLKEMEKRVKEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGER 535
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V+++ KNLRVC DCH+ + +S + + +VRDANRFH FE G CSC DYW
Sbjct: 536 VIRIFKNLRVCGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 229/454 (50%), Gaps = 20/454 (4%)
Query: 7 STEGFYDQLLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
S +++L C+ L +Q+H + G + +G +I Y+ G A
Sbjct: 2 SESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGF-DVIXVVGNSMIDMYSKCGMVGEAAR 60
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+FN++ S WN MI Y N + E L L+ MR G + YT+ LKAC+
Sbjct: 61 VFNTLPVRNVIS--WNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCA 118
Query: 124 SLILEGKVVHGDIIRTGF--LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
EG +H +IR GF L+ S V ALVD+Y KC + + KVFD + + ++SW+
Sbjct: 119 DAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWST 178
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+I Y Q + +EA+ LF++ ++ D + S+ + + + +H Y I
Sbjct: 179 LILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVP 238
Query: 242 F-LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ L ++ + NS++ MY +CG +A +F M +R+++SW M+TGY ++G ++A+ LF
Sbjct: 239 YGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELF 298
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYA 358
+EMQ + +P+ VT L ++SAC++ G + G+K+ I+ SN KI + + ++D+
Sbjct: 299 NEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFS-ILCSNQKIKPKVEHYACMVDLLG 357
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDH 415
+ G L A+N+ + P + NV W L++ MHG G++ E + EG P +
Sbjct: 358 RGGRLKEAKNLIEKM-PLKPNVGIWQTLLSVCRMHGDVEMGKQVGEIL--LRREGNNPAN 414
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
S + A HAG E K + + +K E
Sbjct: 415 YVMVSNMYA--HAGYWKESEKIRETLKRKGLKKE 446
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/632 (36%), Positives = 358/632 (56%), Gaps = 23/632 (3%)
Query: 69 HNDKSYSFLWNTMIRAYANNGHCV------------ETLELYSTMR--RSGISSNSYTFP 114
+ ++ + L +T IR +++G C+ E +EL+ + G T+
Sbjct: 62 YRERKVAVLDDTQIRKTSSSGLCIQIEKLVLCNRYREAMELFEILELEHDGFDVGGSTYD 121
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
++ AC I K V ++ +GF D YV ++ ++ KCG D K+FDEM +
Sbjct: 122 ALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEK 181
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
D+ SW MI + + EA LF +E S T ++ A LG V + +H
Sbjct: 182 DMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIH 241
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
A+ +D + +++ MY++CG++E A VFD M ++ + WNS++ Y +G +
Sbjct: 242 SCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSE 301
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EAL + EM++S K + T I++ C L S + ++ H ++ D A++
Sbjct: 302 EALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALV 361
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
D Y+K G ++ A ++FN + +NV SWN LIAGYG HG G +A+E F QML EG+ P+
Sbjct: 362 DFYSKWGRMEDAWHVFNRMR--RKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPN 419
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
H+TF ++LSACS++GL + G + F M++ VKP HYACMV++LGR G L EA+++I
Sbjct: 420 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELI 479
Query: 474 KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
+ P P ++W LL ACR+H G++AA L+ +EPE ++++ N+Y +S K +
Sbjct: 480 RSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLK 539
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
E + + +K KGL+ A + IE K F D+ + KE+Y+KV +M VEI G
Sbjct: 540 EAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHG 599
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y+ + L DV DE+ + +L YHSEKLA+AFG++N +Q+T+ RVC DCHSA +
Sbjct: 600 YVEENKALLPDV-DEEEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIK 658
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
FI+ + R+I+VRDA+RFHHF G+CSC DYW
Sbjct: 659 FIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 193/394 (48%), Gaps = 11/394 (2%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
+G ST YD L+ +C L S+R ++ + + SG L++ +++ + G
Sbjct: 115 VGGST---YDALVSACVGLRSIRGVKRVFNYMVNSGF-EPDLYVMNRVLFVHVKCGLMLD 170
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR LF+ + S W TMI + ++G+ E L+ M S TF +++A
Sbjct: 171 ARKLFDEMPEKDMAS--WMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRAS 228
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A L+ G+ +H ++ G D++V AL+DMY+KCG +D VFD+M + V W
Sbjct: 229 AGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWN 288
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I +Y EEAL + + + G D TI V +L + A+ H +
Sbjct: 289 SIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRR 348
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ D+ ++V Y++ G +E A VF+ M ++++ISWN+++ GY +GQ EA+ +F
Sbjct: 349 GYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMF 408
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAK 359
++M PN VT L ++SAC+Y G + G + F+ + +K A ++++ +
Sbjct: 409 EQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGR 468
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
G LD A + P + + W L+ MH
Sbjct: 469 EGLLDEAYELIRSA-PFKPTTNMWATLLTACRMH 501
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 329/555 (59%), Gaps = 8/555 (1%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH G L + V LV Y+ DD +FD M VRD VSW+VM+ + +
Sbjct: 757 VHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGD 816
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
F++ + G D+ T+ V A L ++ + +H D + +
Sbjct: 817 YMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAA 876
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MY +C +E AR +FD M +RDL++W M+ GY + G A+E+L+LFD+M+ P+
Sbjct: 877 LVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPD 936
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V + +V AC LG+ R YI ++D L A++DM+AKCG +++A +F+
Sbjct: 937 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 996
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ E+NV SW+ +IA YG HG GRKAL+ F ML G+ P+ IT S+L ACSHAGL+
Sbjct: 997 RM--EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLV 1054
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG + F+ M + SV+ +VKHY C+VD+LGRAG L EA +I M ++ +WGA L
Sbjct: 1055 EEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLG 1114
Query: 491 ACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACR H ++ AA L +L+P++ G+++L+SNIYA + +W +V K+R+ M + LKK
Sbjct: 1115 ACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKI 1174
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
++ IE F D +P KE+Y+ ++S+ ++++ GY+PD + LHDV++E +
Sbjct: 1175 PGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK 1234
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+L HSEKLA+AFG++ +++ KNLRVC DCH+ + +S I R IIVRDANR
Sbjct: 1235 IGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 1294
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSC DYW
Sbjct: 1295 FHHFKEGACSCGDYW 1309
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/530 (36%), Positives = 309/530 (58%), Gaps = 8/530 (1%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
F + A + + + + VH G L + V L+ Y+ DD +FD M VR
Sbjct: 64 FYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR 123
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
D VSW+VM+ + + F++ + G D+ T+ V A L ++ + +H
Sbjct: 124 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH 183
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
D + ++V MY +C +E AR +FD M++RDL++W M+ GY + G+A+
Sbjct: 184 HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 243
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
E+L+LF++M+ P+ V + +V AC LG+ R YI ++D L A++
Sbjct: 244 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMI 303
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
DMYAKCG +++A +F+ + E+NV SW+ +IA YG HG GRKAL+ F ML G+ PD
Sbjct: 304 DMYAKCGCVESAREIFDRM--EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPD 361
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
IT S+L ACSHAGL++EG + F+ M + SV+ +VKHY C+VD+LGRAG L EA +I
Sbjct: 362 KITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLI 421
Query: 474 KQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
K M + ++ +WGA L ACR H ++ AA L +L+ ++ G++VL+SNIYA + +W
Sbjct: 422 KSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWE 481
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
+V K+R+ M + LKK ++ IE F D +P KE+Y+ ++S++ ++++ G
Sbjct: 482 DVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELVG 541
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
Y+PD + LHDV++E + +L HSEKLA+AFG++ +++ KNLR
Sbjct: 542 YVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/426 (31%), Positives = 227/426 (53%), Gaps = 9/426 (2%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
++RL P FY L +C L +RQ+H+ + G++ + + K+I Y+ Y +
Sbjct: 57 LQRLNPK---FYISALVNCRNLTQVRQVHAQASVHGMLENIV-VANKLIYFYSYYRALDD 112
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF+ + S S W+ M+ +A G + + + R G ++YT PFV++AC
Sbjct: 113 AYGLFDGMCVRDSVS--WSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC 170
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ G+++H + + G D +V AALVDMY KC + +D +FD+M RDLV+WT
Sbjct: 171 RDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWT 230
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
VMI Y + K E+L+LF+K ++EG++ D V +V+V A +LG + KA+ + Y
Sbjct: 231 VMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRK 290
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F D+ + +++ MYA+CG VE AR +FD ME++++ISW++M+ Y +GQ +AL LF
Sbjct: 291 KFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF 350
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAK 359
M +S P+ +T L+ AC++ G + G +F + + +++ D V+D+ +
Sbjct: 351 PMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGR 410
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITF 418
G LD A + + E++ W + H A + + +LE + P H
Sbjct: 411 AGRLDEALKLIKSM-TIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVL 469
Query: 419 TSILSA 424
S + A
Sbjct: 470 LSNIYA 475
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 215/405 (53%), Gaps = 6/405 (1%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L +RQ+H + G++ Q L + K++ Y+ Y + A LF+ + S S W+ M
Sbjct: 751 LTQVRQVHXQASVHGML-QNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVS--WSVM 807
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
+ +A G + + + R G ++YT PFV++AC + G+++H + + G
Sbjct: 808 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D +V AALVDMY KC + +D +FD+M RDLV+WTVMI Y + E+L+LF K
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
++EG++ D V +V+V A +LG + KA+ + Y F D+ + +++ M+A+CG
Sbjct: 928 MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
VE AR +FD ME++++ISW++M+ Y +GQ +AL LF M S PN +T + L+ A
Sbjct: 988 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 1047
Query: 322 CTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
C++ G + G +F + + +++ D V+D+ + G LD A + + E++
Sbjct: 1048 CSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSM-TXEKDE 1106
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSA 424
W + H A + + +LE + P H S + A
Sbjct: 1107 GLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYA 1151
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 344/576 (59%), Gaps = 12/576 (2%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
+ F + +C S S +H +I++ SD ++ LV MY K G +D ++FDEM
Sbjct: 67 SLVFAISSCTSVSYC---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKA 230
+DLVSW +++ L F + + E G + VT++SV SA +G + +
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+++HG + + NS++ MY + G ++ A +F+ M R L+SWNSM+ + N
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 243
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G A + + LF+ M+ + P+ T + L+ ACT G + H YI D +
Sbjct: 244 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 303
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
A++++YAK G L+ +E++F +I +R+ +W ++AGY +H GR+A++ F M++EG
Sbjct: 304 TALLNLYAKLGRLNASEDIFEEI--KDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEG 361
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEA 469
V+ DH+TFT +LSACSH+GL++EG+K F M+++ V+P + HY+CMVD+LGR+G L +A
Sbjct: 362 VEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDA 421
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAAS 524
+++IK MP+ P+ VWGALL ACR++G + A L L+P ++++SNIY+A+
Sbjct: 422 YELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAA 481
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
WR+ K+R MK + L + S IE+G I F D+++P E++ K+E + +I
Sbjct: 482 GLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKI 541
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
+ AG P LHD+++E + M+N HSEKLA+AFG++ + +TKNLR+C DCH
Sbjct: 542 REAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCH 601
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S +F S + +R II+RD+ RFHHF G CSC DYW
Sbjct: 602 STAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 211/432 (48%), Gaps = 11/432 (2%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+ SC ++ IH+ + S + +G +++ Y G A+ LF+ + N S
Sbjct: 72 ISSCTSVSYCSAIHARVIKSLNYSDGF-IGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVS 130
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
WN+++ + G+ L + MR SG N T V+ ACA + EGK +HG
Sbjct: 131 --WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHG 188
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+++ G + V +L++MY K G D ++F+EM VR LVSW M+ + E+
Sbjct: 189 VVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 248
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+ LF ++ G+ D T+V++ A G +A+++H Y F D+ I +++
Sbjct: 249 GMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLN 308
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
+YA+ G + + +F+ ++ RD I+W +ML GY + EA+ LFD M + + VT
Sbjct: 309 LYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVT 368
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR--NAVMDMYAKCGDLDTAENMFND 372
L+SAC++ G + G+K+ I++ +++ L + ++D+ + G L+ A +
Sbjct: 369 FTHLLSACSHSGLVEEGKKYF-EIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKS 427
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP-DHITFTSILSACSHAGLI 431
+ P E + W L+ ++G+ E Q+L + P DH + + + S AGL
Sbjct: 428 M-PMEPSSGVWGALLGACRVYGNVELGKEVAEQLLS--LDPSDHRNYIMLSNIYSAAGLW 484
Query: 432 DEGRKCFADMTK 443
+ K A M +
Sbjct: 485 RDASKVRALMKE 496
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 142/284 (50%), Gaps = 4/284 (1%)
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
+ S+ A+ V A+H I + D I + +V+MY + G E A+ +FD M
Sbjct: 65 VQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMP 124
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SDCKPNPVTALILVSACTYLGSRQLGR 332
+DL+SWNS+++G G L F M+ S +PN VT L +VSAC +G+ G+
Sbjct: 125 NKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGK 184
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
HG ++ M A + N++++MY K G LD A +F ++ R++ SWN ++ +
Sbjct: 185 SLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEM--PVRSLVSWNSMVVIHNH 242
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
+G+ K ++ F+ M G+ PD T ++L AC+ GL + A + + ++
Sbjct: 243 NGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIII 302
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
++++ + G L + D+ +++ + W A+L +H
Sbjct: 303 ATALLNLYAKLGRLNASEDIFEEIK-DRDRIAWTAMLAGYAVHA 345
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/575 (36%), Positives = 344/575 (59%), Gaps = 7/575 (1%)
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
S I ++ + +LK C L+++G++VH I+++ F D + L++MYAKCG ++
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
KVF++M RD V+WT +I+ Y Q ++P +AL+ F + + G + T+ SV A
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+HG+ + F ++ + ++++ +Y R G ++ A+LVFD +E R+ +SWN++
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ G+ + +AL LF M +P+ + L AC+ G + G+ H Y+I S
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
K+ A N ++DMYAK G + A +F+ + ++R+V SWN L+ Y HG G++A+ +F
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRL--AKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
+M G++P+ I+F S+L+ACSH+GL+DEG + M K + PE HY +VD+LGRA
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L A I++MP+ P ++W ALL ACR+H G AA ++F+L+P+ G V++
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA+ +W + ++R+ MK G+KK A S +E I F D +P +E+ +K E
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 531
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ +IK GY+PD S + V+ ++RE L YHSEK+A+AF ++N P + + + KN+R
Sbjct: 532 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 591
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
VC DCH+A + S + R+IIVRD NRFHHF+ +
Sbjct: 592 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 218/450 (48%), Gaps = 14/450 (3%)
Query: 6 PSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P+ FY+ LLK C L R +H+ + S + + +G ++ Y G AR
Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F + + W T+I Y+ + + L ++ M R G S N +T V+KA A+
Sbjct: 116 KVFEKMPQRDFVT--WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
G +HG ++ GF S+ +V +AL+D+Y + G DD VFD + R+ VSW +
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I + + E+AL LFQ ++G + S+ A G + + + VH Y I +
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
N+++ MYA+ G++ AR +FD + KRD++SWNS+LT Y Q+G EA+ F+E
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M+ +PN ++ L +++AC++ G G ++ + + +A V+D+ + GD
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFT 419
L+ A ++ P E + W L+ MH + G A E ++ + P H+
Sbjct: 414 LNRALRFIEEM-PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP-HVILY 471
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPE 449
+I ++ G ++ + M + VK E
Sbjct: 472 NIYAS---GGRWNDAARVRKKMKESGVKKE 498
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/572 (37%), Positives = 333/572 (58%), Gaps = 10/572 (1%)
Query: 117 LKACASNSLILEGKVVHGDIIRTG--FLSDSYVQAALVDMYA-KCGQTDDGCKVFDEMSV 173
L C + SL K +H + TG L S ++ L+++YA G F ++
Sbjct: 9 LSKCTTLSLP-HTKQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILTFSQIRT 67
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
W +I + Q+ P A ++ + D++T V A ++ L++ +
Sbjct: 68 PSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQI 127
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H + + F+ D + +++ +YA+ G ++ A VFD M KRD+ SWN++++G+ Q +
Sbjct: 128 HTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKP 187
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
+EAL LF M+ KPN ++ L +SAC LG + G K HGYI ++A + N V
Sbjct: 188 TEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVV 247
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+DMYAKCG +D A +F + +++ +WN +I + MHG G KALE F +M + GV P
Sbjct: 248 IDMYAKCGFVDKAYLVFESM-SCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSP 306
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
D +++ ++L AC+H GL++EG + F M VKP VKHY +VD+LGRAG L+EA+D++
Sbjct: 307 DDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAYDIV 366
Query: 474 KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
MP P+ +W LL A R H E + L ++ H G FVL+SN+YAA +W
Sbjct: 367 NSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWA 426
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
+VG++RE MKN+ +KK S IE I F+ AD+ + W+E+Y K++ + +K G
Sbjct: 427 DVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYG 486
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y+ + S LHD+ +ED+E++L +HSEKLAVAFG+++ + +QV KNLR+C DCH +
Sbjct: 487 YVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIK 546
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS IY R+IIVRD RFH F+ G CSC DYW
Sbjct: 547 LISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 210/403 (52%), Gaps = 8/403 (1%)
Query: 13 DQLLKSCNFLA--SLRQIHSSLTTSGLINQALHLG-AKIIIKYT-TYGEPNTARSLFNSI 68
D L C L+ +Q+H+ L T+G + +K++ Y + G + A F+ I
Sbjct: 6 DSFLSKCTTLSLPHTKQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILTFSQI 65
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ WN +IR + + + Y +M ++ T FVLKACA LE
Sbjct: 66 RTPSTND--WNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLE 123
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
+H I+R GF++D+ + L+D+YAK G+ D KVFDEM RD+ SW +I+ + Q
Sbjct: 124 SIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQ 183
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
KP EAL LF++ + +G + ++++ SA QLGD + + +HGY F + +
Sbjct: 184 GSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQV 243
Query: 249 QNSIVAMYARCGNVEKARLVFDMME-KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
N ++ MYA+CG V+KA LVF+ M ++D+++WN+M+ + +G+ +AL LF++M S
Sbjct: 244 CNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSG 303
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
P+ V+ L ++ AC + G + G + + N +K + +V+D+ + G L A
Sbjct: 304 VSPDDVSYLAVLCACNHGGLVEEGFRLFNSMENCGVKPNVKHYGSVVDLLGRAGRLHEAY 363
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
++ N + P+ ++ W L+ H + A +++E G
Sbjct: 364 DIVNSM-PTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMG 405
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/675 (35%), Positives = 373/675 (55%), Gaps = 52/675 (7%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP-NTARSLFNSIHNDKS 73
L C L +++QI + + + L + L G ++ T + + AR LF I N
Sbjct: 11 LFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDV 70
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLILEGKVV 132
F++NT+IR +++ L+L+ MRR ++ +S++F F+LKA A+ + G +
Sbjct: 71 --FMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQL 128
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H + G S +V L+ MYA+C KVFDEM ++V+W ++ A + E
Sbjct: 129 HCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGV 188
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
++A +F+ L S N +
Sbjct: 189 KDAEQVFRCMPIRNLTS---------------------------------------WNIM 209
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+A Y + G ++ AR VF M +D +SW++M+ G+ NG ++A F E++ +PN
Sbjct: 210 LAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNE 269
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
V+ ++SAC G+ + GR HG++ S ++ NA++D Y+KCG+LD A +F++
Sbjct: 270 VSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDN 329
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ R+ SW +IAG MHG+G +A+ F++M E +KPD ITF SIL ACSHAGL+D
Sbjct: 330 M--LRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVD 387
Query: 433 EGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
G F+ M ++P ++HY CMVD+ GRAG L +A+D + QMP+ PND VW LL A
Sbjct: 388 LGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGA 447
Query: 492 CRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C IHG + L +L+PE++G VL+SNIYA + KW++V LR M ++ LKK
Sbjct: 448 CSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTP 507
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM-AGYMPDLSCALHDVEDEDR 605
+S+IE + I F ++ N E ++K+ + +++ GY+P++ LHD+E E++
Sbjct: 508 GWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEK 567
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E ++ HSEKLAVAFG+ L ++V KNLR+C DCH+ + IS +Y +I+VRD +R
Sbjct: 568 EDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSR 627
Query: 666 FHHFEGGTCSCNDYW 680
FH F G+CSC DYW
Sbjct: 628 FHSFTHGSCSCRDYW 642
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/723 (33%), Positives = 397/723 (54%), Gaps = 52/723 (7%)
Query: 6 PSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
PS + LLK+C L L Q+H+ LT GL A ++ Y G A
Sbjct: 49 PSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFS-AAALVDAYGKCGHAYYAA 107
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-------RSGISSNSYTFPF 115
+F+ + W +I AY++NG E + MR + +
Sbjct: 108 QVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGA 167
Query: 116 VLKACA---SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
++ ACA ++ + G VHG +++ GF +++ ++V MY+ C +VF+ +
Sbjct: 168 LVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIP 227
Query: 173 V--RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS---DSVTIVSVASAVGQLGDV 227
+ RD+VSW +I+ + + E AL F+ EG + + VT++++ + +LG V
Sbjct: 228 IEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCV 287
Query: 228 LKAQAVHGYAICN----AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ VH Y +D+ + +++ M+ARCGN+ AR +FD +E ++++ W++M
Sbjct: 288 ETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAM 347
Query: 284 LTGYIQNGQASEALLLFDEM------QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
+ GY Q EAL LF +M + KPN VT + +++AC+ LG+ + H Y
Sbjct: 348 IAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKY 407
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ + + DA + +A++DM AKCGD++ +F+++ S R V SW+ +I G+HG G+
Sbjct: 408 AVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGK 467
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACM 456
+ALE FS+M G +P+ IT+ S+LSACSHAGL+++G+ CF M K + P KHYAC+
Sbjct: 468 RALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACL 527
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHT 511
VD+LGRAG L EA ++I MP+ + ++WG+LL AC +H GEI + L+
Sbjct: 528 VDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSV 587
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G+ VL++N+Y + +W +V ++R +++ GL+K S IE G ++ F DR +P +
Sbjct: 588 GHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESE 647
Query: 572 EVYKKVESMAVEI-KMAGYMPDLSCALHDVEDEDREHML---NYHSEKLAVAFGIM---- 623
+YK+++ + + K A Y+ + +VED D ++ YHSE+LA+AFG++
Sbjct: 648 MIYKELDGLDERVRKAAKYVTETGL---NVEDGDIAGLIXRCKYHSERLAIAFGLIMIDR 704
Query: 624 ------NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+L +++TKNLRVC DCH+ + +S + R++IVRDA+RFHHF G CSC
Sbjct: 705 HSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCG 764
Query: 678 DYW 680
DYW
Sbjct: 765 DYW 767
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 227/451 (50%), Gaps = 31/451 (6%)
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+F WN++I A L ++ M+ + SN++TFP +LKACA+ +L VH
Sbjct: 18 TFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHA 76
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKP 192
+ R G +D + AALVD Y KCG +VFDEM D+VSWT +I+AY
Sbjct: 77 YLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCV 136
Query: 193 EEALILFQKTQ----QEGLLSDSVTIVSV-----ASAVGQLGDVL-KAQAVHGYAICNAF 242
+EA F + + +G V +VS+ A AVG + L + AVHG + F
Sbjct: 137 DEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGF 196
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFD--MMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ NS+V MY+ C +V A VF+ +E+RD++SWNS+++G+ NG+A AL F
Sbjct: 197 GVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTF 256
Query: 301 DEM---QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI----DATLRNAV 353
++M S +PN VT + L+ +C LG + H YI + + + D + A+
Sbjct: 257 EDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTAL 316
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG--- 410
+DM+A+CG+L A +F+ + +NV W+ +IAGY +AL F QML EG
Sbjct: 317 LDMHARCGNLALAREIFDGVEG--KNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMV 374
Query: 411 ---VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
VKP+ +T S+++ACS G + + + + ++DM + G +
Sbjct: 375 GVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIE 434
Query: 468 EAFDMIKQMPLPPNDSV-WGALLLACRIHGE 497
+ +M V W +++ A IHGE
Sbjct: 435 HGRQVFSEMDESTRTVVSWSSMIGAEGIHGE 465
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/690 (37%), Positives = 392/690 (56%), Gaps = 30/690 (4%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
R+ P+ F LK+C+ LA R IH +GL L + ++ Y
Sbjct: 5 RVAPNNYTF-PFALKACSALADHHCGRAIHRHAIHAGL-QADLFVSTALLDMYVKCACLP 62
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNG---HCVETLELYSTMRRSGISSNSYTFPFV 116
A +F ++ + WN M+ YA++G H V L L M+ + N+ T +
Sbjct: 63 DAAHIFATMPARDLVA--WNAMLAGYAHHGMYHHAVAHL-LSMQMQMHRLRPNASTLVAL 119
Query: 117 LKACASNSLILEGKVVHGDIIRTGF---------LSDS-YVQAALVDMYAKCGQTDDGCK 166
L A + +G VH IR L+D + AL+DMYAKCG +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT-IVSVASAVGQLG 225
VFD M R+ V+W+ +I + + +A +LF+ +GL S T I S A L
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + +H + DL NS+++MYA+ G +++A +FD M +D +S++++++
Sbjct: 240 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 299
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY+QNG+A EA L+F +MQ + +P+ T + L+ AC++L + Q GR HG +I +
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLAS 359
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ ++ NA++DMYAKCG +D + +FN + PS R++ SWN +IAGYG+HG G++A F +
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFN-MMPS-RDIVSWNTMIAGYGIHGLGKEATALFLE 417
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M G PD +TF +LSACSH+GL+ EG+ F M + P ++HY CMVD+L R G
Sbjct: 418 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG 477
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA++ I+ MPL + VW ALL ACR++ G+ + + +L PE TG FVL+SN
Sbjct: 478 FLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSN 537
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+A+ ++ E ++R K +G KK S IE + F D+ +P E+Y+++++
Sbjct: 538 IYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDN 597
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ V IK GY PD S L D+E+E++E L HSEKLA+A+GI++L+ + + VTKNLRV
Sbjct: 598 ILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRV 657
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
C DCH+ + IS + RR IIVRDANRFHHF
Sbjct: 658 CGDCHTVIKHISLVKRRAIIVRDANRFHHF 687
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 216/436 (49%), Gaps = 31/436 (7%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M R ++ N+YTFPF LKAC++ + G+ +H I G +D +V AL+DMY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL--ILFQKTQQEGLLSDSVTIVSVA 218
D +F M RDLV+W M+ Y A+ +L + Q L ++ T+V++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 219 SAVGQLGDVLKAQAVHGYAI--C--------NAFLEDLCIQNSIVAMYARCGNVEKARLV 268
+ Q G + + +VH Y I C + + + + +++ MYA+CG++ AR V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGS 327
FD M R+ ++W++++ G++ + ++A LLF M C +P + + AC L
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
++G + H + S + D T N+++ MYAK G +D A +F+++ + ++ S++ L+
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM--AVKDTVSYSALV 298
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
+GY +G +A F +M V+PD T S++ ACSH + GR + +
Sbjct: 299 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLA 358
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQM--PLPPNDSV-WGALLLACRIHGEIAANYLF 504
E ++DM + G D+ +Q+ +P D V W ++ IHG
Sbjct: 359 SETSICNALIDMYAKCG----RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHG-------- 406
Query: 505 QLEPEHTGYFVLMSNI 520
L E T F+ M+N+
Sbjct: 407 -LGKEATALFLEMNNL 421
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/614 (35%), Positives = 355/614 (57%), Gaps = 18/614 (2%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N +I++ G + + + S S + T+ ++ C S + + VH I+
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G D ++ L+ MY+ G D KVFD+ R + W + A A EE L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 199 FQKTQQEGLLSDSVTIVSVASAV----GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+ K + G+ SD T V A + ++K + +H + + + I ++V
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNP 312
MYAR G V+ A VF M R+++SW++M+ Y +NG+A EAL F EM + D PN
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT + ++ AC L + + G+ HGYI+ + + +A++ MY +CG L+ + +F+
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+H +R+V SWN LI+ YG+HG+G+KA++ F +ML G P +TF S+L ACSH GL++
Sbjct: 346 MH--DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG++ F M + +KP+++HYACMVD+LGRA L EA M++ M P VWG+LL +
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 492 CRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIHG + A+ LF LEP++ G +VL+++IYA + W EV ++++ ++++GL+K
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
+E + + F + D NP ++++ + +A ++K GY+P L+++E E++E
Sbjct: 524 GRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKE 583
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
++ HSEKLA+AFG++N + +++TKNLR+C DCH +FIS ++I+VRD NRF
Sbjct: 584 RIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRF 643
Query: 667 HHFEGGTCSCNDYW 680
H F+ G CSC DYW
Sbjct: 644 HRFKNGVCSCGDYW 657
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 207/394 (52%), Gaps = 14/394 (3%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y+ L+ C +SL ++H + +G +Q L K+I Y+ G + AR +F+
Sbjct: 80 YELLILCCGHRSSLSDALRVHRHILDNG-SDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL--- 125
K ++WN + RA GH E L LY M R G+ S+ +T+ +VLKAC ++
Sbjct: 139 R--KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVN 196
Query: 126 -ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+++GK +H + R G+ S Y+ LVDMYA+ G D VF M VR++VSW+ MI
Sbjct: 197 HLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIA 256
Query: 185 AYEQAEKPEEALILFQKTQQEGLLS--DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
Y + K EAL F++ +E S +SVT+VSV A L + + + +HGY +
Sbjct: 257 CYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
L + +++V MY RCG +E + VFD M RD++SWNS+++ Y +G +A+ +F+E
Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEE 376
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCG 361
M + P PVT + ++ AC++ G + G++ F + +K ++D+ +
Sbjct: 377 MLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRAN 436
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
LD A M D+ +E W L+ +HG+
Sbjct: 437 RLDEAAKMVQDMR-TEPGPKVWGSLLGSCRIHGN 469
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/674 (36%), Positives = 375/674 (55%), Gaps = 19/674 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L+SC + R ++H+ + G + L A ++ Y G+ AR +F+S+
Sbjct: 195 VLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNA-LMTMYAKCGDVMAARKVFDSMTVM 253
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI + NG C LEL+ TM + N T V A S + K
Sbjct: 254 DCIS--WNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKE 311
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG ++ GF D +L+ MYA G VF M RD ++WT MI+ YE+
Sbjct: 312 MHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGF 371
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P++AL ++ + + D +TI S +A LG + +H A F+ + + N+
Sbjct: 372 PDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNA 431
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
I+ MYA+ ++KA VF M ++D++SW+SM+ G+ N + EAL F M +D KPN
Sbjct: 432 ILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPN 490
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++AC G+ + G++ H +++ ++ + L NA++D+Y KCG A F
Sbjct: 491 SVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQF- 549
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++V SWN++IAG+ HGHG AL FF+QM++ G PD +TF ++L ACS G++
Sbjct: 550 -CAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMV 608
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
EG + F MT K S+ P +KHYACMVD+L RAG L EA++ I +MP+ P+ +VWGALL
Sbjct: 609 SEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLN 668
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
CRIH GE+AA Y+ LEP GY VL+ ++YA + W ++ ++R+ M+ KGL
Sbjct: 669 GCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHD 728
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED- 604
+ S +E + F T D +P +E+ +E + +K +GY P S H EDE
Sbjct: 729 SGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVES---HCPEDEVL 785
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
++ + HSE+LAVAFG++N TP + VTKN C CH + IS I RR IIVRD+
Sbjct: 786 KDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIVRDSK 845
Query: 665 RFHHFEGGTCSCND 678
+ HHF+ G+CSC D
Sbjct: 846 QLHHFKDGSCSCGD 859
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 236/464 (50%), Gaps = 13/464 (2%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQ-----ALHLGAKIIIKYTTYGEPNT 60
P E Y L + C + R + L + L LG ++ +GE
Sbjct: 85 PPDEDAYVALFRLCEWR---RAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWH 141
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +F + +S WN M+ Y +G E L+LY M +G+ + YTFP VL++C
Sbjct: 142 AWRVFAKMPERDVFS--WNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSC 199
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
G+ VH ++R GF + V AL+ MYAKCG KVFD M+V D +SW
Sbjct: 200 GGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWN 259
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI + + + L LF + + + +TI SV A G L DV A+ +HG A+
Sbjct: 260 AMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKR 319
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F D+ NS++ MYA G + +AR VF M+ RD ++W +M++GY +NG +AL ++
Sbjct: 320 GFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVY 379
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
M+ ++ P+ +T ++AC LGS +G K H + + NA+++MYAK
Sbjct: 380 ALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKS 439
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
+D A +F +H E++V SW+ +IAG+ + +AL +F ML + VKP+ +TF +
Sbjct: 440 KRIDKAIEVFKCMH--EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIA 496
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
L+AC+ G + G++ A + + ++ E ++D+ + G
Sbjct: 497 ALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCG 540
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/692 (33%), Positives = 382/692 (55%), Gaps = 44/692 (6%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
QIH + G + L + ++ Y GE ++AR +F+ + S W +MI YA
Sbjct: 155 QIHGLIVKMGYA-KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS--WTSMICGYA 211
Query: 87 NNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ ++L+ M R ++ NS T V+ ACA + G+ V+ I +G +
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ +ALVDMY KC D ++FDE +L M + Y + EAL +F
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ D ++++S S+ QL ++L ++ HGY + N F I N+++ MY +C + A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQA-------------------------------S 294
+FD M + +++WNS++ GY++NG+
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 295 EALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EA+ +F MQ+ + + VT + + SAC +LG+ L + + YI + +++D L +
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+DM+++CGD ++A ++FN + + R+VS+W I M G+ +A+E F M+E+G+KP
Sbjct: 512 VDMFSRCGDPESAMSIFNSL--TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKP 569
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDM 472
D + F L+ACSH GL+ +G++ F M KL V PE HY CMVD+LGRAG L EA +
Sbjct: 570 DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Query: 473 IKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKW 527
I+ MP+ PND +W +LL ACR+ G + AA + L PE TG +VL+SN+YA++ +W
Sbjct: 630 IEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRW 689
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
++ K+R MK KGL+KP S I+ F + D +P + ++ ++
Sbjct: 690 NDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL 749
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
G++PDLS L DV+++++ ML+ HSEKLA+A+G+++ +++ KNLRVC+DCHS
Sbjct: 750 GHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFA 809
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
+F S +Y R+II+RD NRFH+ G CSC D+
Sbjct: 810 KFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 257/486 (52%), Gaps = 42/486 (8%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
LK+C + L+ H SLT GL N + K++ + G + N +SY
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTI-TKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 76 --FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F++N++IR YA++G C E + L+ M SGIS + YTFPF L ACA + G +H
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G I++ G+ D +VQ +LV YA+CG+ D KVFDEMS R++VSWT MI Y + + +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 194 EAL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQN 250
+A+ + F+ + E + +SVT+V V SA +L D+ + V+ + I N+ +E DL + +
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMV-S 275
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MY +C ++ A+ +FD +L N+M + Y++ G EAL +F+ M +S +P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ ++ L +S+C+ L + G+ HGY++ + + + NA++DMY KC DTA +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE---------------------- 408
+ + S + V +WN ++AGY +G A E F M E
Sbjct: 396 DRM--SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 409 ----------EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
EGV D +T SI SAC H G +D + + + K ++ +V+ +VD
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 459 MLGRAG 464
M R G
Sbjct: 514 MFSRCG 519
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
+N LI GY G +A+ F +M+ G+ PD TF LSAC+ + G + +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL--ACRIHGEIAA 500
K+ ++ +V G L A + +M N W +++ A R + A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICGYARRDFAKDAV 220
Query: 501 NYLFQL--EPEHTGYFVLMSNIYAASNKWR--EVG-KLREDMKNKGLK 543
+ F++ + E T V M + +A K E G K+ ++N G++
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/672 (33%), Positives = 373/672 (55%), Gaps = 55/672 (8%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+++ Y + A +F S+ S WN +I A + +G E L++ M G+
Sbjct: 231 MLVGYAKSHGVDHALEIFKSMPERDVVS--WNMVISALSKSGRVREALDMVVDMHGKGVR 288
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+S T+ L ACA S + GK +H +IR D YV +A+V++YAKCG + +V
Sbjct: 289 PDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRV 348
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F + R+ VSWTV+I + Q E++ LF + + E + D + ++ S D+
Sbjct: 349 FSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDI 408
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+H + + + + NS+++MYA+CGN++ A L+F+ M +RD++SW M+T Y
Sbjct: 409 CLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAY 468
Query: 288 IQNGQASEALLLFDEMQN--------------------------------SDCKPNPVTA 315
Q G ++A FD+M D P+ VT
Sbjct: 469 SQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTY 528
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ L C +G+ +LG + G+ + + +D ++ NAV+ MY+KCG + A F+ +
Sbjct: 529 VTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFL-- 586
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
S +++ SWN +I GY HG G++A+E F +L +G KPD+I++ ++LS CSH+GL++EG+
Sbjct: 587 SRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGK 646
Query: 436 KCFADMTKL--SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
F DM K ++ P ++H++CMVD+LGRAG L EA ++I +MP+ P VWGALL AC+
Sbjct: 647 FYF-DMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACK 705
Query: 494 IHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
HG E+AA +LF L+ +G ++L++ +YA + K + ++R+ M++KG+KK +
Sbjct: 706 THGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGY 765
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S +E + F D +P + +K++ + +I GY+ + R +
Sbjct: 766 SWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVR---------TESPRSEI 816
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
+HSEKLAVAFGIM+L + + KNLR+C+DCH+ + IS + R+ ++RD RFHH
Sbjct: 817 --HHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGVRFHH 874
Query: 669 FEGGTCSCNDYW 680
F+GG+CSC DYW
Sbjct: 875 FKGGSCSCMDYW 886
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 148/596 (24%), Positives = 255/596 (42%), Gaps = 86/596 (14%)
Query: 18 SCNFLASLRQI-HSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
SC L+ R + +T +I + + Y G + A LF + S
Sbjct: 72 SCGALSDARNLLRDEITEPNVITHNIMMNG-----YAKLGSLSDAVELFGRMPTRDVAS- 125
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLILEGKVVHGD 135
WNT++ Y +G + L+++ +MR++G S N++TF V+K+C + + G
Sbjct: 126 -WNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGL 184
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCK----------------------------- 166
+ + D VQ ALVDM +CG D K
Sbjct: 185 LSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHA 244
Query: 167 --VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
+F M RD+VSW ++I+A ++ + EAL + +G+ DS T S +A +L
Sbjct: 245 LEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARL 304
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
+ + +H I N D + +++V +YA+CG ++A+ VF + R+ +SW ++
Sbjct: 305 SSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLI 364
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
G++Q G SE++ LF++M+ + L+S C LG + H + S
Sbjct: 365 GGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHT 424
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFN-----DI------------------------HP 375
+ N+++ MYAKCG+L AE +FN DI
Sbjct: 425 RAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDM 484
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQML-EEGVKPDHITFTSILSACSHAGLIDEG 434
S RNV +WN ++ Y HG L+ +S ML E+ V PD +T+ ++ C+ G G
Sbjct: 485 STRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLG 544
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE---AFDMIKQMPLPPNDSVWGALLLA 491
+ K+ + + ++ M + G + E AFD + + L W A++
Sbjct: 545 DQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVS----WNAMITG 600
Query: 492 CRIHG------EIAANYLFQ-LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
HG EI + L + +P++ Y ++S + + E GK DM +
Sbjct: 601 YSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSG--CSHSGLVEEGKFYFDMMKR 654
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 206/421 (48%), Gaps = 42/421 (9%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y L +C L+SL +Q+H + + L + ++ + ++ Y G A+ +F+S+
Sbjct: 294 YTSSLTACARLSSLEWGKQLHVQVIRN-LPHIDPYVASAMVELYAKCGCFKEAKRVFSSL 352
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ S S W +I + G E++EL++ MR ++ + + ++ C + I
Sbjct: 353 RDRNSVS--WTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICL 410
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G +H +++G V +L+ MYAKCG + +F+ M+ RD+VSWT MITAY Q
Sbjct: 411 GSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQ 470
Query: 189 AEKPEEALILFQK--------------------TQQEGL------------LSDSVTIVS 216
+A F +++GL + D VT V+
Sbjct: 471 VGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVT 530
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRD 276
+ +G + G+ + + D + N+++ MY++CG + +AR FD + ++D
Sbjct: 531 LFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKD 590
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
L+SWN+M+TGY Q+G +A+ +FD++ N KP+ ++ + ++S C++ G + G KF+
Sbjct: 591 LVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEG-KFYF 649
Query: 337 YIINSNMKIDATLR--NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
++ + I L + ++D+ + G L A+N+ +++ P + W L++ HG
Sbjct: 650 DMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEM-PMKPTAEVWGALLSACKTHG 708
Query: 395 H 395
+
Sbjct: 709 N 709
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 166/375 (44%), Gaps = 70/375 (18%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV------------------------ 152
L++C + S + + +H +I G S ++Q L+
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 153 --------DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+ YAK G D ++F M RD+ SW +++ Y Q+ + AL +F +Q
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151
Query: 205 EG-LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF--LEDLCIQNSIVAMYARCG- 260
G L ++ T V + G LG A+ + + F +D +Q ++V M RCG
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALG--WHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGA 209
Query: 261 ------------------------------NVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
V+ A +F M +RD++SWN +++ ++
Sbjct: 210 MDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKS 269
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+ EAL + +M +P+ T ++AC L S + G++ H +I + ID +
Sbjct: 270 GRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVA 329
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
+A++++YAKCG A+ +F+ + +RN SW VLI G+ +G +++E F+QM E
Sbjct: 330 SAMVELYAKCGCFKEAKRVFSSLR--DRNSVSWTVLIGGFLQYGCFSESVELFNQMRAEL 387
Query: 411 VKPDHITFTSILSAC 425
+ D +++S C
Sbjct: 388 MAVDQFALATLISGC 402
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 46/286 (16%)
Query: 228 LKAQAVHGYAICNAFLE------------DLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
L+ +H Y C A + ++ N ++ YA+ G++ A +F M R
Sbjct: 62 LQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTR 121
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
D+ SWN++++GY Q+GQ AL +F M Q D PN T ++ +C LG ++ +
Sbjct: 122 DVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQL 181
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI-HPS----------------- 376
G + + + D ++ A++DM +CG +D A F+ I +P+
Sbjct: 182 LGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGV 241
Query: 377 -----------ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
ER+V SWN++I+ G R+AL+ M +GV+PD T+TS L+AC
Sbjct: 242 DHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTAC 301
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHY--ACMVDMLGRAGCLYEA 469
+ ++ G++ + + P + Y + MV++ + GC EA
Sbjct: 302 ARLSSLEWGKQLHVQVIR--NLPHIDPYVASAMVELYAKCGCFKEA 345
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/671 (34%), Positives = 366/671 (54%), Gaps = 14/671 (2%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK C +L+Q IHS + G +G ++ Y+ G A +F +I
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEF-IGCGLVDMYSKCGLAIDAIGVFKTI--K 376
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
K +W+ +I G E+++L+ MR N YT +L A + + G+
Sbjct: 377 KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS 436
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H + + GF +D V ALV MY K G DG K+++ M RDL+SW ++
Sbjct: 437 IHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGM 496
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ L +F +EG + + T +S+ + L DV + VH + I N ++ + +
Sbjct: 497 YDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTA 556
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MYA+C +E A + F+ + RDL +W ++T Y Q Q +AL F +MQ KPN
Sbjct: 557 LIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPN 616
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T +S C+ L S + G++ H + S D + +A++DMYAKCG ++ AE +F
Sbjct: 617 EFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFE 676
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ R+ +WN +I GY +G G KAL F ML+EG+ PD +TFT ILSACSH GL+
Sbjct: 677 AL--IRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLV 734
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG++ F M + + P V H ACMVD+LGR G E D I++M L N +W +L
Sbjct: 735 EEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLG 794
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
A ++H GE AAN LF+L+PE ++L+SNI+A +W +V ++R M +KG+KK
Sbjct: 795 ASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKE 854
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S +E + F + D +P +E++ K++ + E+ Y+P LH+V + ++
Sbjct: 855 PGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEK 914
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ L +HSE+LA+ F +++ + E +++ KNLR+C DCH + IS I ++I+VRD R
Sbjct: 915 KENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRR 974
Query: 666 FHHFEGGTCSC 676
FHHF+ G CSC
Sbjct: 975 FHHFKNGACSC 985
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 235/457 (51%), Gaps = 8/457 (1%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LK+C+ +L +Q+H+ GL+ L +G+ ++ Y GE A +F +
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLLLD-LFVGSALVDLYAKCGEIELASKMFIGMPEQN 278
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+ WN ++ YA G L+L+ +M + N +T VLK CA++ + +G+V+
Sbjct: 279 DVT--WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVI 336
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H II+ G+ + ++ LVDMY+KCG D VF + D+V W+ +IT +Q +
Sbjct: 337 HSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQS 396
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EE++ LF + L + TI S+ SA G++ Q++H F D+ + N++
Sbjct: 397 EESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNAL 456
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V MY + G V +++ M RDLISWN+ L+G G L +F M PN
Sbjct: 457 VTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNM 516
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T + ++ +C+ L GR+ H +II + + + + A++DMYAKC L+ A+ FN
Sbjct: 517 YTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNR 576
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ S R++ +W V+I Y G KAL +F QM +EGVKP+ T LS CS ++
Sbjct: 577 L--SVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLE 634
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
G++ + + K ++ + +VDM + GC+ EA
Sbjct: 635 GGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEA 671
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 233/505 (46%), Gaps = 13/505 (2%)
Query: 11 FYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+Y +L+ C SL + IH L +IN HL ++ Y AR +
Sbjct: 114 YYSSMLRECASKRSLGVAKAIHG-LIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAK 172
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ + S W +I+ G +++ L+ M+ GI N +T LKAC+ +
Sbjct: 173 MPDRDVVS--WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALD 230
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
GK +H + G L D +V +ALVD+YAKCG+ + K+F M ++ V+W V++ Y
Sbjct: 231 LGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYA 290
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q L LF + + + T+ +V ++ + Q +H I + +
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
I +V MY++CG A VF ++K D++ W++++T Q GQ+ E++ LF M+ D
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN T L+SA T G+ Q G+ H + + D + NA++ MY K G +
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
++ + +R++ SWN ++G G + L F MLEEG P+ TF SIL +CS
Sbjct: 471 KLYESM--VDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY-EAFDMIKQMPLPPNDSVWG 486
+ GR+ A + K + ++DM A C+Y E D+ + W
Sbjct: 529 LFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMY--AKCMYLEDADVAFNRLSVRDLFTWT 586
Query: 487 ALLL--ACRIHGEIAANYLFQLEPE 509
++ A GE A NY Q++ E
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQE 611
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/657 (34%), Positives = 369/657 (56%), Gaps = 41/657 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF+ + + SF+ T+I+ YA + +E +EL+ + R G N + F +LK
Sbjct: 92 ASKLFDEMPERNTISFV--TLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLL 149
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
S G +H I + G S+++V AL+D Y+ CG+ D +VFD + +D+VSWT
Sbjct: 150 VSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWT 209
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
M+T + + + +EAL LF + + G ++ T SV A L ++VHG A+ +
Sbjct: 210 GMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKS 269
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ DL + +++ +Y + G+++ AR F+ + K+D+I W+ M+ Y Q+ Q+ EA+ +F
Sbjct: 270 RYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMF 329
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M+ + PN T ++ AC + LG + H ++I + D + NA+MD+YAKC
Sbjct: 330 FQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKC 389
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE----------- 409
G ++ + +F + RN +WN +I G+ G G KAL F MLE
Sbjct: 390 GRMENSMELFAE--SPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSS 447
Query: 410 --------------------GVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKP 448
VKPD +TF +LSAC++AGL+D+G+ F M + ++P
Sbjct: 448 ALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEP 507
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYL 503
++HY CMV +LGR G L +A +I ++P P+ VW ALL AC IH G I+A +
Sbjct: 508 CIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRV 567
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA 563
++EP+ VL+SN+YA + +W V +R++MK KG+KK S IE + F
Sbjct: 568 LEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVG 627
Query: 564 DRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIM 623
D +P + + +E + ++ K AGY+P+ + L DVEDE++E +L HSE+LA++FGI+
Sbjct: 628 DTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGII 687
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +++ KNLR+C DCH+A + IS + +R+I+VRD NRFHHF+ G CSC DYW
Sbjct: 688 RTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 207/420 (49%), Gaps = 15/420 (3%)
Query: 79 NTMIRAYANNGHCVETLELYSTM--RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
N + ++ G V++ +L S NS+ + L+ C GK +H +I
Sbjct: 5 NNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++ G D + L++MY K D K+FDEM R+ +S+ +I Y ++ + EA+
Sbjct: 65 LKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124
Query: 197 ILFQKTQQEG-----LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
LF + +EG + ++ + V++ G+LG + A NAF + +
Sbjct: 125 ELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAF-----VGTA 179
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ Y+ CG V+ AR VFD + +D++SW M+T + +N EAL LF +M+ KPN
Sbjct: 180 LIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPN 239
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + AC L + +G+ HG + S ++D + A++D+Y K GD+D A F
Sbjct: 240 NFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFE 299
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+I +++V W+ +IA Y ++A+E F QM + V P+ TF S+L AC+ +
Sbjct: 300 EI--PKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGL 357
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ G + + K+ + +V ++D+ + G + + ++ + P ND W +++
Sbjct: 358 NLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP-HRNDVTWNTVIVG 416
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/639 (34%), Positives = 360/639 (56%), Gaps = 26/639 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
++ Y +G AR +F +H+ + ++ N M+ + G + L+L++ MRR+G S
Sbjct: 390 LLDAYCKHGLLAAARRVFLEMHDKDAVTY--NAMMMGCSKEGLHTQALQLFAAMRRAGYS 447
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +L+ S S R+ + + +V +L+D Y+KC DD ++
Sbjct: 448 RHPL---HLLQYSHSRS-------------RSTSVLNVFVNNSLLDFYSKCDCLDDMRRL 491
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
FDEM RD VS+ V+I AY + L LF++ Q+ G + ++ S G L DV
Sbjct: 492 FDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDV 551
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ +H + + + N+++ MY++CG ++ A+ F ++ ISW +++TGY
Sbjct: 552 HIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGY 611
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
+QNGQ EAL LF +M+ + +P+ T ++ A + L LGR+ H Y+I S K
Sbjct: 612 VQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSV 671
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ ++DMYAKCG LD A F+++ ERN SWN +I+ Y +G + A++ F ML
Sbjct: 672 FSGSVLVDMYAKCGCLDEALRTFDEM--PERNSISWNAVISAYAHYGEAKNAIKMFEGML 729
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCL 466
G PD +TF S+L+ACSH GL DE K F M + S+ P +HYAC++D LGR GC
Sbjct: 730 HCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCF 789
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIY 521
+ M+ +MP + +W ++L +CRIHG +AA+ LF +EP +V++SNIY
Sbjct: 790 SQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIY 849
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A + +W + +++ M+++G++K + +S +E + I F + D +P E+ +++ +
Sbjct: 850 ARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLY 909
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
E+ GY PD++CALH V+ E + L YHSE+LA+AF +MN +++ KNL C
Sbjct: 910 KEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACL 969
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH+ + IS I R IIVRD+ RFHHF+ G CSC DYW
Sbjct: 970 DCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 216/453 (47%), Gaps = 32/453 (7%)
Query: 48 IIIKYTTYGEPNTARSLF-NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI 106
I+ Y++ G+ A+ LF +S H + + W M+RA+A G + L L+ M G+
Sbjct: 294 ILSAYSSSGDLPAAQHLFLSSPHRNAT---TWTIMMRAHAAAGRTSDALSLFRAMLGEGV 350
Query: 107 SSNSYTFPFVL--KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG 164
+ T VL C SL H I+ G + +V L+D Y K G
Sbjct: 351 IPDRVTVTTVLNLPGCTVPSL-------HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAA 403
Query: 165 CKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
+VF EM +D V++ M+ + +AL LF ++ G + ++ + + +
Sbjct: 404 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRS 463
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
VL N F + NS++ Y++C ++ R +FD M +RD +S+N ++
Sbjct: 464 TSVL-----------NVF-----VNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVII 507
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
Y N A+ L LF EMQ + ++S L +G++ H ++ +
Sbjct: 508 AAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLA 567
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ L NA++DMY+KCG LD A++ F++ SE++ SW LI GY +G +AL+ FS
Sbjct: 568 SEDLLGNALIDMYSKCGMLDAAKSNFSNR--SEKSAISWTALITGYVQNGQHEEALQLFS 625
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
M G++PD TF+SI+ A S +I GR+ + + + K V + +VDM + G
Sbjct: 626 DMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCG 685
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
CL EA +MP N W A++ A +GE
Sbjct: 686 CLDEALRTFDEMP-ERNSISWNAVISAYAHYGE 717
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N ++ Y+ GDL A+++F + RN ++W +++ + G AL F ML EG
Sbjct: 292 NLILSAYSSSGDLPAAQHLF--LSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEG 349
Query: 411 VKPDHITFTSILS 423
V PD +T T++L+
Sbjct: 350 VIPDRVTVTTVLN 362
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 54/230 (23%)
Query: 260 GNVEKARLVFDMMEKRDLIS-------------------------------WNSMLTGYI 288
G++ +AR +FD M +++ S W M+ +
Sbjct: 271 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA 330
Query: 289 QNGQASEALLLFDEMQNSDCKPN--PVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
G+ S+AL LF M P+ VT ++ + CT H + I +
Sbjct: 331 AAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTH 383
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ N ++D Y K G L A +F ++H +++ ++N ++ G G +AL+ F+ M
Sbjct: 384 VFVCNTLLDAYCKHGLLAAARRVFLEMH--DKDAVTYNAMMMGCSKEGLHTQALQLFAAM 441
Query: 407 LEEGVK--PDHI--------TFTSILSACSHAGLIDEGRK--CFADMTKL 444
G P H+ TS+L+ + L+D K C DM +L
Sbjct: 442 RRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRL 491
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/638 (35%), Positives = 365/638 (57%), Gaps = 18/638 (2%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G AR +F + S WNT++ NGH +E L+L+ R S
Sbjct: 250 YAKCGLVEEARVVFCGMETRDMVS--WNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQS 307
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T+ V+K CA+ + + +H +++ GF S V AL+D Y+K GQ + +F M
Sbjct: 308 TYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLM 367
Query: 172 S-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA-VGQLGDVLK 229
S +++VSWT MI Q A LF + +++G+ + T ++ +A V L +
Sbjct: 368 SGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIH 427
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
AQ + C + + +++A Y++ N E+A +F M++++D++SW++MLT Y Q
Sbjct: 428 AQVIKTNYECTSI-----VGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQ 482
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSAC-TYLGSRQLGRKFHGYIINSNMKIDAT 348
G + A +F +M KPN T ++ AC + LGR+FH I
Sbjct: 483 AGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALC 542
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ +A++ MYA+ G +++A+ +F ++R++ SWN +++GY HG+ +KAL+ F QM
Sbjct: 543 VSSALVSMYARKGSIESAQCIFE--RQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEA 600
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLY 467
EG++ D +TF S++ C+HAGL++EG++ F M + + P ++HYACMVD+ RAG L
Sbjct: 601 EGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLD 660
Query: 468 EAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYA 522
EA +I+ M P VW LL AC++H G++AA L LEP + +VL+SNIY+
Sbjct: 661 EAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYS 720
Query: 523 ASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAV 582
A+ KW+E ++R+ M K +KK A S I+ + F +D+ +P +++Y K+ +M
Sbjct: 721 AAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTT 780
Query: 583 EIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCND 642
++K GY PD S ALH+V +E +E ML HSE+LA+AFG++ P A + + KNLRVC D
Sbjct: 781 KLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGD 840
Query: 643 CHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
CH+ + +S I R+I++RD +RFHHF G CSC D+W
Sbjct: 841 CHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 167/310 (53%), Gaps = 2/310 (0%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
VLK C S + GK +HG IR G D V +LVDMY K DG KVF+ M R
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
++V+WT ++T Y Q + + LF + + EG+ +SVT SV S V G V + VH
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
++ + + NS++ MYA+CG VE+AR+VF ME RD++SWN+++ G + NG
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EAL LF + ++S T ++ C + L R+ H ++ + A+M
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALM 348
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
D Y+K G L A ++F + S+ NV SW +I G +G A FS+M E+GV P+
Sbjct: 349 DAYSKAGQLGNALDIFLLMSGSQ-NVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPN 407
Query: 415 HITFTSILSA 424
T+++IL+A
Sbjct: 408 DFTYSTILTA 417
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 227/491 (46%), Gaps = 19/491 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H G + +G ++ Y + R +F ++ K W +++ Y
Sbjct: 123 KQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM--PKRNVVTWTSLLTGY 180
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+G + +EL+ MR G+ NS TF VL AS ++ G+ VH ++ G S
Sbjct: 181 IQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTV 240
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V +L++MYAKCG ++ VF M RD+VSW ++ EAL LF ++
Sbjct: 241 FVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSS 300
Query: 206 -GLLSDSV--TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+L+ S T++ + + + QLG A+ +H + F + +++ Y++ G +
Sbjct: 301 ITMLTQSTYATVIKLCANIKQLG---LARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQL 357
Query: 263 EKARLVFDMME-KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
A +F +M ++++SW +M+ G IQNG A LF M+ PN T +++A
Sbjct: 358 GNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
L + H +I +N + + + A++ Y+K + + A ++F I +++V
Sbjct: 418 SV----ASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMI--DQKDVV 471
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC-SHAGLIDEGRKCFAD 440
SW+ ++ Y G A F +M G+KP+ T +S++ AC S +D GR+ A
Sbjct: 472 SWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAI 531
Query: 441 MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG--EI 498
K + + +V M R G + E+ I + + W ++L HG +
Sbjct: 532 SIKHRCHDALCVSSALVSMYARKGSI-ESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQK 590
Query: 499 AANYLFQLEPE 509
A + Q+E E
Sbjct: 591 ALDVFRQMEAE 601
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/626 (36%), Positives = 346/626 (55%), Gaps = 44/626 (7%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF S+ + K+Y W M+ YA NG ++ ++ + MR G+ SN +TFP +L AC
Sbjct: 188 AEYLFFSLPDRKNY-VQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
S S G+ VHG II +GF + YVQ+ALVDMYAKCG + D M + D+V W
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWN 306
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI EEAL+LF K + D T SV ++ ++ ++VH I
Sbjct: 307 SMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKT 366
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F + N++V MYA+ GN+ A VF+ + +D+ISW S++TGY+ NG +AL LF
Sbjct: 367 GFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLF 426
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M+ + + + SAC L + GR+ H I S+ + N+++ MYAKC
Sbjct: 427 CDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKC 486
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G L+ A + + + RNV SW +I GY +
Sbjct: 487 GCLEDAIRVXDSMET--RNVISWTAIIVGYAQN--------------------------- 517
Query: 421 ILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
GL++ G+ F M K+ +KP YACM+D+LGRAG + EA ++ +M +
Sbjct: 518 --------GLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVE 569
Query: 480 PNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P+ ++W +LL ACR+HG E A L +LEP ++ +VL+SN+++ + +W + +R
Sbjct: 570 PDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIR 629
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
MK G+ + +S IE + F + DR +P E+Y K++ M + IK AG++PD++
Sbjct: 630 RAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMN 689
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
AL D+++E +E L YHSEKLAVAFG++ + A +++ KNLRVC DCHSA ++IS I+
Sbjct: 690 FALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIF 749
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
+R II+RD N FHHF G CSC D+W
Sbjct: 750 KRHIILRDLNCFHHFIEGKCSCGDFW 775
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/497 (29%), Positives = 250/497 (50%), Gaps = 23/497 (4%)
Query: 27 QIHSSLTTSGLINQALHLGAKI-----------IIKYTTYGEPNTARSLFNS--IHNDKS 73
Q+ S L+ +G +++A L ++ I Y G AR LFN I N
Sbjct: 42 QLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXN--- 98
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
S W++++ Y NG VE L +S M G + YT VL+AC++ SL+ GK++H
Sbjct: 99 -SITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIH 157
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKP 192
I+ ++ +V LVDMY+KC + +F + R + V WT M+T Y Q +
Sbjct: 158 CYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGES 217
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+A+ F++ + +G+ S+ T S+ +A + + VHG I + F ++ +Q+++
Sbjct: 218 LKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSAL 277
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V MYA+CG++ AR++ D ME D++ WNSM+ G + +G EAL+LF +M N D + +
Sbjct: 278 VDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDD 337
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T ++ + + ++G H I + T+ NA++DMYAK G+L A ++FN
Sbjct: 338 FTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNK 397
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
I +++V SW L+ GY +G KAL+ F M V D + SAC+ +I+
Sbjct: 398 I--LDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIE 455
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
GR+ A+ K S + ++ M + GCL +A + M N W A+++
Sbjct: 456 FGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSME-TRNVISWTAIIVGY 514
Query: 493 RIHG--EIAANYLFQLE 507
+G E +Y +E
Sbjct: 515 AQNGLVETGQSYFESME 531
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 39/298 (13%)
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL------------- 277
+ +HG A ++ L+ N +++ ++ G V++AR +FD M RD
Sbjct: 26 RCIHGIAHYSSNLD----SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANL 81
Query: 278 ------------------ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
I+W+S+++GY +NG E L F +M + KP+ T ++
Sbjct: 82 GNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVL 141
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC+ L G+ H Y I ++ + + ++DMY+KC L AE +F + P +N
Sbjct: 142 RACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSL-PDRKN 200
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
W ++ GY +G KA++ F +M +G++ +H TF SIL+AC+ GR+
Sbjct: 201 YVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHG 260
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ P V + +VDM + G L A ++ M + +D V W ++++ C HG
Sbjct: 261 CIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEI--DDVVCWNSMIVGCVTHG 316
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/674 (36%), Positives = 376/674 (55%), Gaps = 19/674 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L+SC + R ++H+ + G + L A ++ Y G+ AR +F+S+
Sbjct: 201 VLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNA-LMTMYAKCGDVVAARKVFDSMAVM 259
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI + NG C LEL+ TM + + N T V A S I K
Sbjct: 260 DCIS--WNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKE 317
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG ++ GF +D +L+ MYA G VF M RD +SWT MI+ YE+
Sbjct: 318 MHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGF 377
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P++AL ++ + + D +TI S +A LG + +H A F+ + + N+
Sbjct: 378 PDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNA 437
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MYA+ ++KA VF M ++D++SW+SM+ G+ N + EAL F M +D KPN
Sbjct: 438 LLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPN 496
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++AC G+ + G++ H +++ + + L NA++D+Y KCG A F
Sbjct: 497 SVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQF- 555
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++V SWN++IAG+ HG+G AL FF+QM++ G PD +TF ++L ACS G++
Sbjct: 556 -CAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMV 614
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
EG + F MT K S+ P +KHYACMVD+L R G L EA++ I +MP+ P+ +VWGALL
Sbjct: 615 SEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLN 674
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
CRIH GE+AA Y+ +LEP GY VL+ ++YA + W ++ ++R+ M+ KGL
Sbjct: 675 GCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHD 734
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED- 604
+ S +E + F T D +P +E+ +E + +K +G P S H ED+
Sbjct: 735 SGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVES---HSPEDKVL 791
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
++ + HSE+LAVAFG++N TP + VTKN C CH + ISYI RR IIVRD+
Sbjct: 792 KDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDIIVRDSK 851
Query: 665 RFHHFEGGTCSCND 678
+ HHF+ G+CSC D
Sbjct: 852 QVHHFKDGSCSCGD 865
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 234/464 (50%), Gaps = 13/464 (2%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQ-----ALHLGAKIIIKYTTYGEPNT 60
P E Y L + C + R + L + L LG ++ +GE
Sbjct: 91 PPDEDAYVALFRLCEWR---RAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWH 147
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +F + +S WN M+ Y G E L+LY M +G+ + YTFP VL++C
Sbjct: 148 AWRVFAKMPERDVFS--WNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSC 205
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
G+ VH ++R GF + V AL+ MYAKCG KVFD M+V D +SW
Sbjct: 206 GGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWN 265
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI + + + L LF Q+ + + +TI SV A G L D+ A+ +HG A+
Sbjct: 266 AMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKR 325
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F D+ NS++ MYA G + +AR VF M+ RD +SW +M++GY +NG +AL ++
Sbjct: 326 GFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVY 385
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
M+ ++ P+ +T ++AC LGS +G K H + + NA+++MYAK
Sbjct: 386 ALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKS 445
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
+D A +F + E++V SW+ +IAG+ + +AL +F ML + VKP+ +TF +
Sbjct: 446 KRIDKAIEVFKCM--PEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIA 502
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
L+AC+ G + G++ A + + + E ++D+ + G
Sbjct: 503 ALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCG 546
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 342/568 (60%), Gaps = 10/568 (1%)
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
AS+S + K +H ++RTGF + + L++ G +VFDEM + W
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+ Y + + P E+L+L++K + G+ D T V A+ QLGD A+H + +
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F + +V MY + G + A +F+ M+ +DL++WN+ L +Q G ++ AL F
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
++M + + T + ++SAC LGS ++G + + + + + NA +DM+ KC
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G+ + A +F ++ +RNV SW+ +I GY M+G R+AL F+ M EG++P+++TF
Sbjct: 259 GNTEAARVLFEEM--KQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLG 316
Query: 421 ILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+LSACSHAGL++EG++ F+ M + +++P +HYACMVD+LGR+G L EA++ IK+MP
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
Query: 478 LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ P+ +WGALL AC +H G+ A+ L + P+ Y VL+SNIYAA+ KW V K
Sbjct: 377 VEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDK 436
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R M+ G KK AA+S +E+ I F+ D+ +P K +Y+K++ + +I+ GY+PD
Sbjct: 437 VRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPD 496
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
HDVE E++E L++HSEKLA+AFG++ P ++V KNLR C+DCH+ +F+S
Sbjct: 497 TCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSS 556
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +II+RD NRFHHF G CSC ++W
Sbjct: 557 LTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 227/449 (50%), Gaps = 15/449 (3%)
Query: 6 PSTEGFYDQLLK-SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
P T+ +LL+ S + L++IH+ + +G ++ L +++ G+ AR +
Sbjct: 7 PLTKQMLSELLRASSSKPKQLKKIHAIVLRTGF-SEKNSLLTQLLENLVVIGDMCYARQV 65
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ +H K FLWNT+ + Y N E+L LY MR G+ + +T+PFV+KA +
Sbjct: 66 FDEMH--KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
G +H +++ GF V LV MY K G+ +F+ M V+DLV+W +
Sbjct: 124 DFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Q AL F K + + DS T+VS+ SA GQLG + + ++ A
Sbjct: 184 VCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
++ ++N+ + M+ +CGN E AR++F+ M++R+++SW++M+ GY NG + EAL LF MQ
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN---AVMDMYAKCG 361
N +PN VT L ++SAC++ G G+++ ++ SN K + ++D+ + G
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITF 418
L+ A + P E + W L+ +H G+K + + + + H+
Sbjct: 364 LLEEAYEFIKKM-PVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPD-IGSYHVLL 421
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLSVK 447
++I +A +D+ R + M KL K
Sbjct: 422 SNIYAAAGKWDCVDKVR---SKMRKLGTK 447
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/679 (34%), Positives = 367/679 (54%), Gaps = 84/679 (12%)
Query: 39 NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA------------ 86
NQ LHL Y +G+ + A+++F+++ YS WNT++ AYA
Sbjct: 62 NQLLHL-------YAKFGKLSDAQNVFDNMTKRDVYS--WNTLLSAYAKMGMVENLHVVF 112
Query: 87 -------------------NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+NGH + L++ M+ G Y+ L+AC+ +
Sbjct: 113 DQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLR 172
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
GK +HG I+ +++V+ A+ DMYAKCG D +FD M +++VSW +MI+ Y
Sbjct: 173 HGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYV 232
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ P E + LF + Q GL D VT+ +V +A
Sbjct: 233 KMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA--------------------------- 265
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
Y RCG V+ AR +F + K+D I W +M+ GY QNG+ +A +LF +M +
Sbjct: 266 --------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRN 317
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
KP+ T +VS+C L S G+ HG ++ + + +A++DMY KCG A
Sbjct: 318 VKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDAR 377
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F + RNV +WN +I GY +G +AL + +M +E KPD+ITF +LSAC +
Sbjct: 378 VIFETM--PIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACIN 435
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
A ++ EG+K F +++ + P + HYACM+ +LGR+G + +A D+I+ MP PN +W
Sbjct: 436 ADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWST 495
Query: 488 LLLACR----IHGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
LL C + E+AA++LF+L+P + G ++++SN+YAA +W++V +R MK K K
Sbjct: 496 LLSVCAKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAK 555
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K AA+S +E G + F + D +P ++Y ++ + ++ GY PD + LH+V +E
Sbjct: 556 KFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEE 615
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAV--VQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
++ ++YHSEKLA+AF ++ P V +++ KN+RVC+DCH +F S R II+R
Sbjct: 616 EKFRSISYHSEKLALAFALIR-KPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMR 674
Query: 662 DANRFHHFEGGTCSCNDYW 680
D+NRFHHF GG CSCND W
Sbjct: 675 DSNRFHHFFGGKCSCNDNW 693
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 132/250 (52%), Gaps = 34/250 (13%)
Query: 226 DVLKAQAVHGYAICNAFL-EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
D ++A+ + + N F +D I N ++ +YA+ G + A+ VFD M KRD+ SWN++L
Sbjct: 37 DFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLL 96
Query: 285 TGYIQ-------------------------------NGQASEALLLFDEMQNSDCKPNPV 313
+ Y + NG + +AL + MQ +P
Sbjct: 97 SAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQY 156
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
+ + + AC+ L + G++ HG I+ +++ + +RNA+ DMYAKCGD+D A +F+ +
Sbjct: 157 SHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGM 216
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
++NV SWN++I+GY G+ + + F++M G+KPD +T +++L+A G +D+
Sbjct: 217 --IDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDD 274
Query: 434 GRKCFADMTK 443
R F + K
Sbjct: 275 ARNLFIKLPK 284
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/649 (35%), Positives = 371/649 (57%), Gaps = 27/649 (4%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETL--------ELYSTMRR 103
Y+T+ P++ R S SF +N +NN H +++L LY
Sbjct: 8 YSTHYPPSSPRY---STSKLSVSSFSFNPSTPPNSNNNHLIQSLCKQGNLKQALYLLSHE 64
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
S + + +L A NSL + VH ++ GF D ++ L++M+++ D+
Sbjct: 65 SNPTQQTCEL-LILSAARRNSLS-DALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDN 122
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
KVFD+ R + W + A A + + L L+ + G+ SD T + A
Sbjct: 123 ARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVA 182
Query: 224 ----LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
+ + K + +H + + + + + + +++ MYAR G V A VFD M ++++S
Sbjct: 183 SECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVS 242
Query: 280 WNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
W++M+ Y +NG+ EAL LF EM D PN VT + ++ AC + + G+ H Y
Sbjct: 243 WSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAY 302
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
I+ + + +A++ MYA+CG L++ + +F+ +H +++V WN LI+ YG+HG+GR
Sbjct: 303 ILRRGLDSILPVISALITMYARCGKLESGQLIFDRMH--KKDVVLWNSLISSYGLHGYGR 360
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACM 456
KA++ F +M++ G P HI+F S+L ACSH GL++EG+K F M K ++P V+HYACM
Sbjct: 361 KAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACM 420
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHT 511
VD+LGRA L EA +I+ + + P VWG+LL ACRIH E A+ LF+LEP +
Sbjct: 421 VDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNA 480
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G +VL+++IYA + W EV ++++ + ++ L+K S IE + I F + D NP +
Sbjct: 481 GNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGE 540
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
+++ + +++ E+K GY P L+D++ E++E ++ HSEKLAVAFG++N + +
Sbjct: 541 QLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTI 600
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++TKNLR+C DCHS +FIS R+I+VRD NRFHHF+ G CSC DYW
Sbjct: 601 RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/574 (36%), Positives = 346/574 (60%), Gaps = 14/574 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA--KCGQTDDGCKVFDEMSV 173
+LK C S + E K VH I++ G DS+ + LV A + G + C +F ++
Sbjct: 36 LLKRCKS---MEEFKQVHAHILKLGLFYDSFCGSNLVATCALSRWGSMEYACSIFRQIEE 92
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+ MI + EEAL+L+ + + G+ D+ T V A LG + + +
Sbjct: 93 PGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQI 152
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H + D+ +QN ++ MY +CG +E A +VF+ M+++ + SW+S++ +
Sbjct: 153 HAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMW 212
Query: 294 SEALLLFDEMQNSDCKPNPVTALI-LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
E L+L +M + L+ +SACT+LGS GR HG ++ + +++ ++ +
Sbjct: 213 HECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTS 272
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++DMY K G L+ +F ++ +++N S+ V+I G +HG GR+AL FS MLEEG+
Sbjct: 273 LIDMYVKSGSLEKGLCVFQNM--AQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLA 330
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PD + + +LSACSHAGL++EG +CF + + +KP ++HY CMVD++GRAG L A+D
Sbjct: 331 PDDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYD 390
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
+IK MP+ PND VW +LL AC++H GEIAA +F+L + G +++++N+YA + K
Sbjct: 391 LIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLANMYARAKK 450
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W +V ++R +M K L + FS++E +++ F + D+ P + +Y ++ M ++K
Sbjct: 451 WADVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQQMEWQLKF 510
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY PD+S L DV+++++ L +HS+KLA+AF ++ + + +++++N+R+CNDCH+
Sbjct: 511 EGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIRISRNIRMCNDCHTY 570
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+FIS IY R+I VRD NRFHHF+ GTCSC DYW
Sbjct: 571 TKFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 604
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 191/383 (49%), Gaps = 8/383 (2%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIK--YTTYGEPNTARSLFNSIHNDK 72
LLK C + +Q+H+ + GL + G+ ++ + +G A S+F I ++
Sbjct: 36 LLKRCKSMEEFKQVHAHILKLGLFYDSF-CGSNLVATCALSRWGSMEYACSIFRQI--EE 92
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
SF +NTMIR N+ + E L LY M GI +++T+PFVLKAC+ + EG +
Sbjct: 93 PGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLGALKEGVQI 152
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H + + G D +VQ L++MY KCG + VF++M + + SW+ +I A+ E
Sbjct: 153 HAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMW 212
Query: 193 EEALILFQKTQQEGL-LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E L+L EG ++ +VS SA LG + +HG + N ++ ++ S
Sbjct: 213 HECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNISELNVAVKTS 272
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY + G++EK VF M +++ S+ ++TG +G+ EAL +F +M P+
Sbjct: 273 LIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEGLAPD 332
Query: 312 PVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
V + ++SAC++ G G + F+ +K ++D+ + G L A ++
Sbjct: 333 DVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLI 392
Query: 371 NDIHPSERNVSSWNVLIAGYGMH 393
+ P + N W L++ +H
Sbjct: 393 KSM-PIKPNDVVWRSLLSACKVH 414
>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
Length = 739
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/709 (34%), Positives = 389/709 (54%), Gaps = 49/709 (6%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ + L++ LA++ ++H + GL + +LG ++ Y +G + A + F+ I
Sbjct: 40 FARELRNARCLAAVEELHCRMIAQGL-DADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAK 98
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+S W +I A+A NGH E L L+ M R G+ +N T VL C+S + G+
Sbjct: 99 NVFS--WTIVISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRS 156
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG +I D + ALV+MY+KCG + F EM VRD+VSWT MITA + +
Sbjct: 157 IHGRVIAAK--KDVVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGE 214
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE---DLCI 248
EA+ +F + E + + ++ ++V A LGD + + +H + I + LE L +
Sbjct: 215 WNEAVEIFWEMVSENVAPNEISCLAVLGACSNLGDRSQVRVIHEF-IASGGLELDKKLVV 273
Query: 249 QNSIVAMYARCGNVEKARLVFDMME--KRDLISWNSMLTGYIQNGQASEALLLFDEM--Q 304
N+++ Y RCG+ AR VFD ++ R+ +SW SM+ Y N QA + L+ EM +
Sbjct: 274 ANTLIHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQR 333
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
K +PV L ++ AC+ L + ++GR+ H I+ + + L A+++MY KCG L
Sbjct: 334 EESKKMDPVAYLCVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLV 393
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
A +F+ + RN+ +WN ++ GY HGH ++AL+ F +GV PD ITF +IL+A
Sbjct: 394 EAREVFDGMKA--RNMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTA 451
Query: 425 CSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL---PP 480
CSHAG++ G F + ++P V HY CMVDMLGRAG L A ++++MP P
Sbjct: 452 CSHAGMVKPGVWHFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPA 511
Query: 481 NDSV-WGALLLACRIHGEI----------------------AANYLFQLEPEHTGYFVLM 517
++ V W ALL +C++H ++ + + + L+ V++
Sbjct: 512 DEFVPWMALLASCKVHTDVKRAARISSVLSAKKKKLLSSSSSGSGSWHLK-NSAAPLVML 570
Query: 518 SNIYAASNKWREVGKLREDMK---NKGL--KKPAAFSVIEYGKDIQGFHTAD-RVNPYWK 571
SNIYA + KW E+ +R ++ +KG+ + S IE I F ++P K
Sbjct: 571 SNIYAQAKKWEEMTGVRNEITEEWSKGMITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHK 630
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
+ +++ + IK AGY+PD S +HDVE+ ++E +L+ HSE++A+AFG+M + +V
Sbjct: 631 GIDSEMKRLEELIKSAGYVPDTSVVMHDVEEAEKEGVLHQHSERMAIAFGLMRGGSDTIV 690
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+V NLR+C+DCH+A + IS R+I+VRD RFHHF G CSC DYW
Sbjct: 691 RVVNNLRICSDCHAAVKLISKTVGREILVRDTRRFHHFASGECSCQDYW 739
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/521 (38%), Positives = 321/521 (61%), Gaps = 8/521 (1%)
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
K+F+ M +DLVSW +I + E L + ++ L DS T+ SV + +
Sbjct: 255 KIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENV 314
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
D+ K + +HG +I ++ + +S++ MYA+C V + VF ++ +RD ISWNS++
Sbjct: 315 DISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIA 374
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
G +QNG E L F +M + KP + ++ AC +L + LG++ HGYI +
Sbjct: 375 GCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 434
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ + ++++DMYAKCG++ TA +F+ + R++ SW +I G +HGH A+E F Q
Sbjct: 435 NIFIASSLVDMYAKCGNIRTARQIFDRMRL--RDMVSWTAMIMGCALHGHALDAIELFEQ 492
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAG 464
M EG++P+++ F ++L+ACSHAGL+DE K F MT + P V+HYA + D+LGRAG
Sbjct: 493 MKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAG 552
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA+D I MP+ P SVW LL ACR+H E AN + +++P++TG ++L++N
Sbjct: 553 RLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLAN 612
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+A+ +W+E K R ++ G++K A S IE + F D +P ++++ + +E
Sbjct: 613 IYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEV 672
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ ++ GY+PD S HDVE+E +++++ HSE+LA+ FGI+N ++VTKNLRV
Sbjct: 673 LMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRV 732
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+A +FIS I R+I+VRD +RFHHF+ GTCSC DYW
Sbjct: 733 CTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/332 (31%), Positives = 174/332 (52%), Gaps = 2/332 (0%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WNT+I A NG ETL + M + + +S+T VL A N I +GK +HG I
Sbjct: 268 WNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSI 327
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R G ++ YV ++L+DMYAKC + D +VF ++ RD +SW +I Q +E L
Sbjct: 328 RQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLK 387
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
F++ + S + S+ A L + + +HGY N F E++ I +S+V MYA
Sbjct: 388 FFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA 447
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CGN+ AR +FD M RD++SW +M+ G +G A +A+ LF++M+ +PN V +
Sbjct: 448 KCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMA 507
Query: 318 LVSACTYLG-SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
+++AC++ G + + F+ ++ + AV D+ + G L+ A + + P
Sbjct: 508 VLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGM-PI 566
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
S W L++ +H + A + +++LE
Sbjct: 567 GPTGSVWATLLSACRVHKNVDMAEKVANRILE 598
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 224/472 (47%), Gaps = 42/472 (8%)
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
LFN++H + + W ++IR Y ++G ++L + M SG+ + FP VLKACA
Sbjct: 64 LFNTLHFPPALA--WKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAML 121
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC-------GQTDDGCKVFDEMSVRDL 176
+ G+ +HG IIR G D Y AL++MY+K Q +V DEM+ R
Sbjct: 122 MDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTR 181
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH-G 235
T + Q K +SD I + V +AQ +
Sbjct: 182 SVRTASVLVGNQGRK----------------VSD---IEAFNYDVSCRSREFEAQVLEID 222
Query: 236 YAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
Y + + E + C + + +V+ R +F+MM ++DL+SWN+++ G +NG
Sbjct: 223 YKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYG 282
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
E L + EM ++ KP+ T ++ G++ HG I + + + ++++
Sbjct: 283 ETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLI 342
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
DMYAKC + + +F + +ER+ SWN +IAG +G + L+FF QML +KP
Sbjct: 343 DMYAKCTRVVDSYRVFTLL--TERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPK 400
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+F+SI+ AC+H + G++ +T+ + + +VDM + G + A +
Sbjct: 401 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFD 460
Query: 475 QMPLPPNDSV-WGALLLACRIHGE-IAANYLFQ------LEPEHTGYFVLMS 518
+M L D V W A+++ C +HG + A LF+ +EP + + +++
Sbjct: 461 RMRL--RDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLT 510
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 148/364 (40%), Gaps = 55/364 (15%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
+Y+ D ++F+ + ++W +I Y P ++L F GL D
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK--------A 265
SV A L D+ +++HGY I DL N+++ MY++ ++K +
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+++ +M E+ + S+L G N K + + A +C
Sbjct: 171 QVLDEMTERTRSVRTASVLVG------------------NQGRKVSDIEAFNYDVSCR-- 210
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG------------DLDTAENMFNDI 373
R+F + ++ID R+ +M A C +D+ +F ++
Sbjct: 211 -----SREFEAQV----LEIDYKPRSEYREMEA-CNLGQQIKDISHSMSVDSVRKIF-EM 259
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
P E+++ SWN +IAG +G + L +M +KPD T +S+L + I +
Sbjct: 260 MP-EKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISK 318
Query: 434 GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLAC 492
G++ + + EV + ++DM + + +++ + L D + W +++ C
Sbjct: 319 GKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTL--LTERDGISWNSIIAGC 376
Query: 493 RIHG 496
+G
Sbjct: 377 VQNG 380
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/696 (35%), Positives = 374/696 (53%), Gaps = 35/696 (5%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++ +SLR Q+H +LT G + + LG +I Y GE + A +F + +
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTM-LGNNLIDMYAKCGELDMAGEVFGGMRDR 281
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGK 130
S W ++ + +G L L MR S + N YT LKAC + G
Sbjct: 282 NVVS--WTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGV 339
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV-RDLVSWTVMITAYEQA 189
+HG +RTG+ V ++LV +Y+K G+ D +VFD + R L +W MI+ Y A
Sbjct: 340 GIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHA 399
Query: 190 EKPEEALILFQK------TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF- 242
+AL++F++ ++ D T S+ A G LG + VH + F
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459
Query: 243 -LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
+ + ++V MY +CG + A VF+ +E+++ I W +++ G+ Q GQ EAL LF
Sbjct: 460 TASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFR 519
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
S + + +V + GR+ H Y + S D + N+++DMY KCG
Sbjct: 520 RFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCG 579
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
D AE MF +I RNV SW +I G G HG GR+A+ F +M GV+PD +T+ ++
Sbjct: 580 LPDEAERMFREI--PARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLAL 637
Query: 422 LSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
LSACSHAGL+DE R+ F+ + + +V+P+ +HYACMVD+LGRAG L EA D+I+ MP+ P
Sbjct: 638 LSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEP 697
Query: 481 NDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
VW LL ACR+H G A + L ++ ++ +V +SN++A + WRE K+R+
Sbjct: 698 TVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRD 757
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTA--DRVNPYWKEVYKKVESMAVEIK-MAGYMPD 592
M+ +GLKK S +E GK++ F+ + +P ++ + + + ++ GY D
Sbjct: 758 AMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCAD 817
Query: 593 -LSCALHDVEDEDREHMLNYHSEKLAVAFGIMN-------LTPEAVVQVTKNLRVCNDCH 644
+ ALHDV++E R L HSE+LAV ++ ++V KNLRVC DCH
Sbjct: 818 DVQFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCH 877
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
F+ +S + RR ++VRDANRFH FE GTCSC DYW
Sbjct: 878 EFFKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/680 (34%), Positives = 379/680 (55%), Gaps = 17/680 (2%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALH--LGAKIIIKYTTYGEPNTARSLFNSI 68
Y L++ C + S+ I + S + + H LG K+I Y G AR +F+ +
Sbjct: 79 LYSSLIQQCIGIKSITDI--TKIQSHALKRGFHHSLGNKLIDAYLKCGSVVYARKVFDEV 136
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ + WN+MI +Y NG E +++Y M GI + +TF V KA + L+ E
Sbjct: 137 PH--RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE 194
Query: 129 GKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ HG + G +S+ +V +ALVDMYAK G+ D V D++ +D+V +T +I Y
Sbjct: 195 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYS 254
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ E+L +F+ ++G+ ++ T+ SV G L D+ + +HG + +
Sbjct: 255 HHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVA 314
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
Q S++ MY RCG V+ + VF + ++W S++ G +QNG+ ALL F +M S
Sbjct: 315 SQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSS 374
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN T ++ AC+ L + G++ H ++ + ID + A++D Y KCG + A
Sbjct: 375 ITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIAR 434
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
++FN + E +V S N +I Y +G G +AL+ FS M + G++P+++T+ +LSAC++
Sbjct: 435 SVFNGL--LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNN 492
Query: 428 AGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL++EG F+ +++ HYACMVD+LGRAG L EA +I Q+ + + +W
Sbjct: 493 AGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVIWR 551
Query: 487 ALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
LL ACRIHG++ N + L PE G VL+SN+YA++ W +V +++ M+
Sbjct: 552 TLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMR 611
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
LKK A S ++ ++I F D +P ++++ +K+E + ++K GY+PD L D++
Sbjct: 612 LKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLD 671
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLT-PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+E + L YHSEKLAVAF + +++ KNLRVC DCH+ +F+S I R II
Sbjct: 672 EEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIA 731
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD RFHHF G CSC DYW
Sbjct: 732 RDVKRFHHFRNGLCSCGDYW 751
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 340/573 (59%), Gaps = 10/573 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L AC + +G+ VH +I+T +L +Y++ L+ Y KC +D KV DEM ++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWT MI+ Y Q EAL +F + + + T +V ++ + + + +HG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + + + +S++ MYA+ G +++AR +F+ + +RD++S +++ GY Q G E
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL +F + + PN VT L++A + L G++ H +++ + A L+N+++D
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPD 414
MY+KCG+L A +F+++ ER SWN ++ GY HG GR+ LE F M +E VKPD
Sbjct: 298 MYSKCGNLSYARRLFDNM--PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
+T ++LS CSH + D G F M + KP +HY C+VDMLGRAG + EAF+
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 473 IKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKW 527
IK+MP P V G+LL ACR+H GE L ++EPE+ G +V++SN+YA++ +W
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+V +R M K + K S I++ + + FH DR +P +EV K++ +++++K A
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 535
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
GY+PDLSC L+DV++E +E ML HSEKLA+ FG++ ++V KNLR+C DCH+
Sbjct: 536 GYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFA 595
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ S ++ R++ +RD NRFH G CSC DYW
Sbjct: 596 KIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 199/401 (49%), Gaps = 13/401 (3%)
Query: 1 MRRLGPSTEGF--YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTY 55
M LGP GF YD LL +C +LR ++H+ + + + A +L +++I Y
Sbjct: 43 MAMLGPEM-GFHGYDALLNACLDKRALRDGQRVHAHMIKTRYL-PATYLRTRLLIFYGKC 100
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF 115
AR + + + S W MI Y+ GH E L +++ M RS N +TF
Sbjct: 101 DCLEDARKVLDEMPEKNVVS--WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFAT 158
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
VL +C S + GK +HG I++ + S +V ++L+DMYAK GQ + ++F+ + RD
Sbjct: 159 VLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERD 218
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VS T +I Y Q EEAL +F + EG+ + VT S+ +A+ L + + H
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + +QNS++ MY++CGN+ AR +FD M +R ISWN+ML GY ++G E
Sbjct: 279 HVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 296 ALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRK-FHGYIINS-NMKIDATLRNA 352
L LF M++ KP+ VT L ++S C++ G F G + K
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC 398
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
++DM + G +D A + PS+ L+ +H
Sbjct: 399 IVDMLGRAGRIDEAFEFIKRM-PSKPTAGVLGSLLGACRVH 438
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/704 (33%), Positives = 359/704 (50%), Gaps = 74/704 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
I+ Y G A +F + S S W MI Y G + ++ M +
Sbjct: 85 ILSGYAKGGRLEEAHRVFEEMPEPDSVS--WTAMIVGYNQMGQFENAIGMFREMVSDDVP 142
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+T VL +CA+ + G+ VH +++ G S V +L++MYAK G V
Sbjct: 143 PTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIV 202
Query: 168 FDEMSV-------------------------------RDLVSWTVMITAYEQAEKPEEAL 196
FD M + RD+VSW MI+ Y Q EAL
Sbjct: 203 FDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREAL 262
Query: 197 ILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+F K + D T+ S SA L ++ + +H + I F + N++++M
Sbjct: 263 DIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISM 322
Query: 256 YARCGNVE---------------------------------KARLVFDMMEKRDLISWNS 282
Y++ G VE AR +FD + RD+++W +
Sbjct: 323 YSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTA 382
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ GY+QNG +A+ LF M KPN T ++S + L S GR+ H S
Sbjct: 383 MIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSG 442
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
++ NA++ MYAK G ++ A +FN IH +R+ +W +I HG G +AL
Sbjct: 443 NASSVSVSNALITMYAKSGSINDARWVFNLIH-WKRDTITWTSMIIALAQHGLGEEALTL 501
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLG 461
F +MLE G+KPDHIT+ +LSAC+H GL+++GR + M + P HYACM+D+ G
Sbjct: 502 FERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFG 561
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA I+ MP+ P+ WG+LL +C++H E+AA L +EPE++G +
Sbjct: 562 RAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSA 621
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
++N+Y+A +W +R+ MK+KG+KK FS ++ + F D ++P +Y+
Sbjct: 622 LANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEM 681
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
+ + EIK G++PD LHD+E+E +E +L++HSEKLA+AFG++ +++ KN
Sbjct: 682 MAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKN 741
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LRVCNDCHSA +FIS + R+IIVRDA RFHHF+ G CSC DYW
Sbjct: 742 LRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 218/491 (44%), Gaps = 101/491 (20%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-------------- 174
GK +H II+ G ++ L++ YAK G D +VFDEM V+
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 175 -----------------DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
D VSWT MI Y Q + E A+ +F++ + + T+ +V
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME---- 273
++ + + + VH + + + + + NS++ MYA+ G+ A++VFD M+
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211
Query: 274 ---------------------------KRDLISWNSMLTGYIQNGQASEALLLFDEM-QN 305
+RD++SWN+M++GY Q+G EAL +F +M +
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
S KP+ T +SAC L + +LG++ H +II + + NA++ MY+K G ++
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331
Query: 366 AENM-----------------------FNDIHPSE--------RNVSSWNVLIAGYGMHG 394
A+ + DI+P+ R+V +W +I GY +G
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
+ A+E F M++EG KP++ T ++LS S +D GR+ A T+ V
Sbjct: 392 FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSN 451
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-EIAANYLFQ------LE 507
++ M ++G + +A + + + W ++++A HG A LF+ ++
Sbjct: 452 ALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIK 511
Query: 508 PEHTGYFVLMS 518
P+H Y ++S
Sbjct: 512 PDHITYVGVLS 522
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/588 (38%), Positives = 338/588 (57%), Gaps = 51/588 (8%)
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCK-----VFDEMSVRDLVSWTVMITAYEQAE 190
++RT D + + +V A C D G VF+++ + +I Y
Sbjct: 1 MLRTCLFVDPFSASKIV---AFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKN 57
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
P +A++ +Q +GL D T S+ + G L + + +H ++ F D IQN
Sbjct: 58 LPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVL---CEGKQLHCHSTKLGFASDAYIQN 114
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISW------------------------------ 280
+++ MY+ CG + AR VFD M + ++SW
Sbjct: 115 TLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLF 174
Query: 281 --NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
N M+ G++++ EAL LF+EMQ S K + VT L+ ACT+LG+ +LG+ H YI
Sbjct: 175 CWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYI 234
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+++D L A++DMYAKCG +++A +F ++ E++V +W LI G M G G K
Sbjct: 235 EKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEM--PEKDVMTWTALIVGLAMCGQGLK 292
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMV 457
ALE F +M VKPD ITF +L+ACSHAGL++EG F M K ++P ++HY CMV
Sbjct: 293 ALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMV 352
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTG 512
DMLGRAG + EA D+I+ MP+ P+ V LL ACRIHG E AA L +L+P++ G
Sbjct: 353 DMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGG 412
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
+VL+SNIY++ W K+RE M + +KKP S IE G + F D +P E
Sbjct: 413 TYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSE 472
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+Y+ ++ M +K AGY+PD S L D++++++E+ L+ HSEKLA+AFG+++ TP ++
Sbjct: 473 IYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIR 532
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLRVC+DCHSA +FIS +Y R+IIVRD NRFHHF G+CSC D+W
Sbjct: 533 VVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 186/381 (48%), Gaps = 39/381 (10%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR +FN I N + F N++IR Y N + + Y M G+ + +TFP + K+C
Sbjct: 31 ARLVFNQIPNPTT--FTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC 88
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
++ EGK +H + GF SD+Y+Q L++MY+ CG KVFD+M + +VSW
Sbjct: 89 G---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWA 145
Query: 181 VMITAYEQAEKP--------------------------------EEALILFQKTQQEGLL 208
MI AY Q + P EEAL LF + Q G+
Sbjct: 146 TMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVK 205
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
D VT+ S+ A LG + + +H Y D+ + ++V MYA+CG++E A V
Sbjct: 206 GDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRV 265
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F M ++D+++W +++ G GQ +AL LF EMQ S+ KP+ +T + +++AC++ G
Sbjct: 266 FQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLV 325
Query: 329 QLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
G + + N ++ ++DM + G + AE++ ++ P + L+
Sbjct: 326 NEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM-PMAPDYFVLVGLL 384
Query: 388 AGYGMHGHGRKALEFFSQMLE 408
+ +HG+ A Q++E
Sbjct: 385 SACRIHGNLVVAERAAQQLIE 405
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 23/353 (6%)
Query: 3 RLGPSTEGFYDQLL----KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP 58
+LG +++ + L +C L S R++ + +++ A +GA Y + P
Sbjct: 103 KLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA-----YAQWDLP 157
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
+ A LF + S F WN MI + + E L L++ M+ SG+ + T +L
Sbjct: 158 HEAIKLFRRME-IASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLI 216
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
AC + GK +H I + D + ALVDMYAKCG + +VF EM +D+++
Sbjct: 217 ACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMT 276
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
WT +I + +AL LF + Q + D++T V V +A G V + G A
Sbjct: 277 WTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNE-----GIAY 331
Query: 239 CNAFLEDLCIQNSI------VAMYARCGNVEKAR-LVFDMMEKRDLISWNSMLTGYIQNG 291
N+ IQ SI V M R G + +A L+ +M D +L+ +G
Sbjct: 332 FNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG 391
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
A ++ D K N T ++L + + + + + +K ++ N+K
Sbjct: 392 NLVVAERAAQQLIELDPK-NGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIK 443
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/658 (34%), Positives = 367/658 (55%), Gaps = 45/658 (6%)
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS---SNSYTFPFVLKA 119
SLF S+ + S+ N +I ++ G + LY T+ R+G S S V+ A
Sbjct: 93 SLFASMAQRDTVSY--NAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAA 150
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM-------- 171
A L G+ H I+R GF +++V + LV MYAK G D +VFDEM
Sbjct: 151 SALGDRAL-GRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMY 209
Query: 172 -----------------------SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL 208
+ RD ++WT M+T + Q +AL F++ + +G+
Sbjct: 210 NTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIA 269
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
D T S+ +A G L + + + +H Y I + +++ + +++V MY++C +++ A
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETA 329
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F M +++ISW +++ GY QNG + EA+ +F EMQ P+ T ++S+C L S
Sbjct: 330 FRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASL 389
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ G +FH + S + T+ NA++ +Y KCG ++ A +F+++ ++ SW L+
Sbjct: 390 EEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQ--VSWTALVT 447
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVK 447
GY G ++ ++ F +ML + VKPD +TF +LSACS AG +++G F M K +
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIV 507
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANY 502
P HY CM+D+ R+G L EA + IKQMP+ P+ WG LL ACR+ G++ AA
Sbjct: 508 PIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAEN 567
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
L +++P++ +VL+ +++A W +V +LR M+++ +KK S I+Y + F
Sbjct: 568 LLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSA 627
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
D+ +P+ K +Y+K+E + ++ GY PD+S LHDV D D+ HM+++HSEKLA+AFG+
Sbjct: 628 DDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGL 687
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
M + E +++ KNLRVC DCH+A + IS I R I+VRDA RFH F G CSC D+W
Sbjct: 688 MFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 177/335 (52%), Gaps = 4/335 (1%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR LF + D+ W TM+ + NG + L + MR GI+ + YTF +L AC
Sbjct: 225 ARRLFE-VMTDRD-CITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTAC 282
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ S + +GK +H IIRT + + +V +ALVDMY+KC F MS ++++SWT
Sbjct: 283 GALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWT 342
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I Y Q EEA+ +F + Q++G+ D T+ SV S+ L + + H A+ +
Sbjct: 343 ALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVS 402
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ + + N++V +Y +CG++E A +FD M D +SW +++TGY Q G+A E + LF
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLF 462
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLG-RKFHGYIINSNMKIDATLRNAVMDMYAK 359
++M D KP+ VT + ++SAC+ G + G FH + + ++D+Y++
Sbjct: 463 EKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSR 522
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
G L AE + P + W L++ + G
Sbjct: 523 SGRLKEAEEFIKQM-PMHPDAIGWGTLLSACRLRG 556
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 183/378 (48%), Gaps = 46/378 (12%)
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG--L 207
AL+ A DD +F M+ RD VS+ +I + A+ L+ + G +
Sbjct: 77 ALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSV 136
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVH------GYAICNAFL------------------ 243
+T+ ++ A LGD + H G+ + NAF+
Sbjct: 137 RPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGV-NAFVGSPLVGMYAKMGLIGDAK 195
Query: 244 --------EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+++ + N+++ RC VE+AR +F++M RD I+W +M+TG+ QNG S+
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL F M+ + T +++AC L + + G++ H YII ++ + + +A++D
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVD 315
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY+KC + AE F + S +N+ SW LI GYG +G +A+ FS+M +G+ PD
Sbjct: 316 MYSKCRSIKPAETAFRRM--SCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDD 373
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA----CMVDMLGRAGCLYEAFD 471
T S++S+C++ ++EG A L++ + HY +V + G+ G + +A
Sbjct: 374 FTLGSVISSCANLASLEEG----AQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429
Query: 472 MIKQMPLPPNDSVWGALL 489
+ +M L + W AL+
Sbjct: 430 LFDEM-LFHDQVSWTALV 446
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 131/278 (47%), Gaps = 32/278 (11%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM- 303
+L N++++ A ++ +F M +RD +S+N+++ G+ G + A+ L+ +
Sbjct: 71 NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130
Query: 304 -QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
S +P+ +T +V A + LG R LGR+FH I+ ++A + + ++ MYAK G
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190
Query: 363 LDTAENMFNDIHP-----------------------------SERNVSSWNVLIAGYGMH 393
+ A+ +F+++ ++R+ +W ++ G+ +
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY 453
G +AL FF +M +G+ D TF SIL+AC +++G++ A + + V
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ +VDM + + A ++M N W AL++
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSC-KNIISWTALIVG 347
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/571 (37%), Positives = 333/571 (58%), Gaps = 8/571 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+LK CA L+L+GK H I+ G +D L++MY+KCG D +VFDEM R
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
LVSW MI + Q + EAL L + Q+EG TI SV A + + Q +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+AI A ++ + +++ +YA+CG ++ A VF+ M R +++W+SM GY+QN +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL LF + + K + ++ AC L + G++ + + S + + ++++D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAKCG ++ + +F D+ +RNV WN +I+G H + + F +M + G+ P+
Sbjct: 310 MYAKCGGIEESYKVFRDVE--KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+TF S+LSAC H GL+ +G+K F MTK + P V HY+CMVD L RAG ++EA+D+I
Sbjct: 368 VTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427
Query: 475 QMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
++P + S+WG+LL +CR HG E+AA LF +EP ++G ++L+SN+YAA+ KW E
Sbjct: 428 KLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDE 487
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V K+R+ +K +KK S IE + F +R +P E+Y K+ + E++ GY
Sbjct: 488 VAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGY 547
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
+ LH V + ++ +L +HSEKLA G++ L P A +++ KNLR+C DCHS +
Sbjct: 548 KVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKL 607
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S + R +IVRD NRFHHF+ G CSC D+W
Sbjct: 608 ASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 204/390 (52%), Gaps = 10/390 (2%)
Query: 11 FYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFN 66
F ++LK C L + H+ + GL L + I+I Y+ G + AR +F+
Sbjct: 66 FVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLL--TSNILINMYSKCGSVDFARQVFD 123
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ + S WNTMI + NG E L+L M+R G + +T VL ACA+ +
Sbjct: 124 EMPSRSLVS--WNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCAL 181
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
E +++H I+ + +V AL+D+YAKCG D VF+ M R +V+W+ M Y
Sbjct: 182 SECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGY 241
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q E E+AL LF+K + GL D + SV A L +++ + ++ + F ++
Sbjct: 242 VQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNI 301
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ +S++ MYA+CG +E++ VF +EKR+++ WN+M++G ++ ++ E ++LF++MQ
Sbjct: 302 FVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQM 361
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDT 365
PN VT + ++SAC ++G + G+K+ + + + M D ++ G +
Sbjct: 362 GLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFE 421
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
A ++ + + P + S W L+A HG+
Sbjct: 422 AYDLISKL-PFNASASMWGSLLASCRTHGN 450
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/637 (35%), Positives = 356/637 (55%), Gaps = 48/637 (7%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G R +F+++ + S S+ NT+I +A NG L ++ M++ G+ Y
Sbjct: 99 YAKSGLVEDLRVIFDNMPSRDSVSY--NTVISGFAGNGRGGPALGVFLRMQKEGLKPTEY 156
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T VL AC + GK +HG II + +V AL D+YA+CG+ D ++FD M
Sbjct: 157 THVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRM 216
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+R++V+W +MI+ Y + +PE+ + LF + Q L D VT SV A
Sbjct: 217 VIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA----------- 265
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
Y + G +++AR VF + ++D + W M+ G QNG
Sbjct: 266 ------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNG 301
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+ +ALLLF EM + +P+ T +VS+C L S G+ HG + D + +
Sbjct: 302 KEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSS 361
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
A++DMY KCG A +F+ + RNV SWN +I GY ++G +AL + MLEE +
Sbjct: 362 ALVDMYCKCGVTRDAWTIFSTMQT--RNVVSWNSMIGGYALNGQDLEALSLYENMLEENL 419
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAF 470
KPD +TF +LSAC HAGL++EG++ F M+ + ++P HYACMV++ GR+G + +A
Sbjct: 420 KPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAV 479
Query: 471 DMIKQMPLPPNDSVWGALLLACRI-----HGEIAANYLFQLEPEHTGYFVLMSNIYAASN 525
D+I M PN +W +L C + HGE+AA L +L P + ++++SN+YAA
Sbjct: 480 DLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARG 539
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
+W++V +R MK+K +KK +A+S IE ++ F DR +P K ++ ++ + +++
Sbjct: 540 RWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQ 599
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV--VQVTKNLRVCNDC 643
AG+ P+ + LHD ++++ +NYHSEKLA+A+G++ P V +++ KN+R C DC
Sbjct: 600 EAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIK-KPHGVTPIRIIKNIRTCADC 658
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
H +F+S I RR +I+RD+NRFHHF G CSC DYW
Sbjct: 659 HIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 177/354 (50%), Gaps = 38/354 (10%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D++ A++ +YAK G +D +FD M RD VS+ +I+ + + AL +F + Q
Sbjct: 88 DNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+EGL T VSV +A QL D+ + + +HG I ++ + N++ +YARCG ++
Sbjct: 148 KEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+AR +FD M R++++WN M++GY++N Q + + LF EMQ S+ KP+ VTA
Sbjct: 208 QARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTA-------- 259
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
++V+ Y + G +D A +F +I E++ W
Sbjct: 260 ---------------------------SSVLGAYIQAGYIDEARKVFGEIR--EKDEVCW 290
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
++I G +G AL FS+ML E +PD T +S++S+C+ + G+
Sbjct: 291 TIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFL 350
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ V ++ + +VDM + G +A+ + M N W +++ ++G+
Sbjct: 351 MGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQ-TRNVVSWNSMIGGYALNGQ 403
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/571 (37%), Positives = 333/571 (58%), Gaps = 8/571 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+LK CA L+L+GK H I+ G +D L++MY+KCG D +VFDEM R
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
LVSW MI + Q + EAL L + Q+EG TI SV A + + Q +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+AI A ++ + +++ +YA+CG ++ A VF+ M R +++W+SM GY+QN +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL LF + + K + ++ AC L + G++ + + S + + ++++D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAKCG ++ + +F D+ +RNV WN +I+G H + + F +M + G+ P+
Sbjct: 310 MYAKCGGIEESYKVFRDVE--KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPND 367
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+TF S+LSAC H GL+ +G+K F MTK + P V HY+CMVD L RAG ++EA+D+I
Sbjct: 368 VTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLIS 427
Query: 475 QMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
++P + S+WG+LL +CR HG E+AA LF +EP ++G ++L+SN+YAA+ KW E
Sbjct: 428 KLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDE 487
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V K+R+ +K +KK S IE + F +R +P E+Y K+ + E++ GY
Sbjct: 488 VAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGY 547
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
+ LH V + ++ +L +HSEKLA G++ L P A +++ KNLR+C DCHS +
Sbjct: 548 KVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKL 607
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S + R +IVRD NRFHHF+ G CSC D+W
Sbjct: 608 ASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 204/390 (52%), Gaps = 10/390 (2%)
Query: 11 FYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFN 66
F ++LK C L + H+ + GL L + I+I Y+ G + AR +F+
Sbjct: 66 FVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLL--TSNILINMYSKCGSVDFARQVFD 123
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ + S WNTMI + NG E L+L M+R G + +T VL ACA+ +
Sbjct: 124 EMPSRSLVS--WNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCAL 181
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
E +++H I+ + +V AL+D+YAKCG D VF+ M R +V+W+ M Y
Sbjct: 182 SECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGY 241
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q E E+AL LF+K + GL D + SV A L +++ + V+ + F ++
Sbjct: 242 VQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNI 301
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ +S++ MYA+CG +E++ VF +EKR+++ WN+M++G ++ ++ E ++LF++MQ
Sbjct: 302 FVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQM 361
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDT 365
PN VT + ++SAC ++G + G+K+ + + + M D ++ G +
Sbjct: 362 GLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFE 421
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
A ++ + + P + S W L+A HG+
Sbjct: 422 AYDLISKL-PFNASASMWGSLLASCRTHGN 450
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/567 (36%), Positives = 348/567 (61%), Gaps = 11/567 (1%)
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA--KCGQTDDGCKVFDEMSVRDLVSWT 180
N+ + E K VH +++ G D++ + LV A K G D C +F ++ +
Sbjct: 8 NNHMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYN 67
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI K EEAL+L+ + G+ D T V A LG V + VHG+
Sbjct: 68 TMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKM 127
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
D+ +QNS++ MY +CG ++ A VF+ M+++ + SW++++ + +E L+L
Sbjct: 128 GLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLL 187
Query: 301 DEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
+M + C+ T + ++SACT+LGS LG+ HG ++ + +++ ++ +++DMY K
Sbjct: 188 GKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVK 247
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
G L+ +F ++ SE+N S+ V+I+G +HG G++AL+ FS+M+EEG+ PD + +
Sbjct: 248 SGCLEKGLRVFKNM--SEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYV 305
Query: 420 SILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
+ SACSHAGL++EG +CF M + ++P V+HY CMVD+LGR G L EA+++IK M +
Sbjct: 306 GVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSI 365
Query: 479 PPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKL 533
PND +W +LL AC++H G+IAA LF L ++G +++++N+YA + KW +V K+
Sbjct: 366 KPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKI 425
Query: 534 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
R + + L + FS+IE + + F + D+ P W +Y+ + M ++K GY+PD
Sbjct: 426 RTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDT 485
Query: 594 SCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYI 653
S L DV+DE+++ L +HS+KLA+AFG+++ + + +++T+NLR+C+DCH+ ++IS I
Sbjct: 486 SQVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMI 545
Query: 654 YRRKIIVRDANRFHHFEGGTCSCNDYW 680
Y R+I VRD RFHHF+ G+CSC DYW
Sbjct: 546 YEREITVRDRLRFHHFKNGSCSCKDYW 572
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 193/408 (47%), Gaps = 39/408 (9%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKI-IIKYTTYGEPNTARSLFNSIHNDKSYSFLW 78
N + +Q+H+ + G+ + + T +G + A S+F I D+ SF +
Sbjct: 9 NHMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQI--DEPSSFDY 66
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
NTMIR N+ E L LY M G+ + +T+PFVLKAC+ ++ EG VHG + +
Sbjct: 67 NTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFK 126
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G D VQ +L++MY KCG+ + C VF+ M + + SW+ +I A+ E E L+L
Sbjct: 127 MGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLML 186
Query: 199 FQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
K EG + T+V+V SA LG + +HG + N ++ ++ S++ MY
Sbjct: 187 LGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYV 246
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+ G +EK VF M +++ S+ M++G +G+ EAL +F EM P+ V +
Sbjct: 247 KSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVG 306
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+ SAC++ G + G + +M+ + H E
Sbjct: 307 VFSACSHAGLVEEGLQCF-----KSMQFE---------------------------HKIE 334
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
V + ++ G G ++A E M +KP+ + + S+LSAC
Sbjct: 335 PTVQHYGCMVDLLGRFGMLKEAYELIKSM---SIKPNDVIWRSLLSAC 379
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/595 (37%), Positives = 352/595 (59%), Gaps = 10/595 (1%)
Query: 93 ETLELYSTMRRSGI-SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAAL 151
E LEL+ + +G +S T+ ++ AC I K V +I +G D Y++ +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ M+ KCG D ++FDEM ++++SW +I A EA LF Q + S
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGS 232
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
V++ A LG + + +H ++ D+ + +++ MY++CG++E A+ VFD
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M ++ + WNS++ GY +G + EAL ++ EM++S K + T I++ C L S +
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ H ++ +D A++D+Y+K G ++ A+++F D+ P +NV SWN LIAGYG
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF-DMMP-HKNVISWNALIAGYG 410
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEV 450
HG G +A+E F +ML EG+ P+H+TF ++LSACS++GL D G + F M++ +KP
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
HYACM+++LGR G L EAF +IK P P ++W ALL ACR+H G+ AA L+
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
+ PE +V++ NIY S + E + + +K +GL+ A S IE K GF + D+
Sbjct: 531 MGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+ KE+Y+K++ + +EI GY+P L DV DE E +L YHSEKLA+AFG++N
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDV-DEQEERVLLYHSEKLAIAFGLINT 649
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +Q+ ++ R+C DCHSA + I+ + RR+I+VRDA+RFHHF+ G+CSC DYW
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 194/386 (50%), Gaps = 8/386 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD L+ +C L S+R ++ + + SGL + +L ++++ + G AR LF+ +
Sbjct: 134 YDALVSACIGLKSIRGVKKVFNYMINSGL-DPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WNT+I + G E L+ M + + S F +++A A LI
Sbjct: 193 PEKNILS--WNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFA 250
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H ++TG D +V AL+DMY+KCG +D VFD+M + V W +I Y
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYAL 310
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL ++ + + G+ D+ T + +L + A+ H + + F D+
Sbjct: 311 HGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVA 370
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++V +Y++ G +E A+ VFDMM +++ISWN+++ GY +G+ EA+ +F+ M +
Sbjct: 371 NTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGM 430
Query: 309 KPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN VT L ++SAC+Y G G + F + +K A ++++ + G LD A
Sbjct: 431 VPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAF 490
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMH 393
+ D P + V+ W L+ +H
Sbjct: 491 ALIKDA-PFKPTVNMWAALLTACRVH 515
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/644 (37%), Positives = 367/644 (56%), Gaps = 54/644 (8%)
Query: 76 FLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
F+ N ++ YA NG L+ M R+ NS + +++L +
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+II ++V YAK G + + FDEM R +VSW M +AY Q E P+E
Sbjct: 191 NII---------TWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKE 241
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV-----HGYAICNAFLEDLCIQ 249
AL LF + +EG+ D T V S+ +GD A ++ + + N+F++ +
Sbjct: 242 ALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLD 301
Query: 250 ---------------------------NSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
N +++ Y R G + AR +FD M KRD++SWNS
Sbjct: 302 MHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNS 361
Query: 283 MLTGYIQNGQASEALLLFDEMQNS-DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
M+ GY QNG+++ ++ LF EM + D +P+ VT ++SAC ++G+ +L +
Sbjct: 362 MIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK 421
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
N+K+ + N+++ MY+KCG + A +F + R+V S+N LI+G+ +GHG++A++
Sbjct: 422 NIKLGISGFNSLIFMYSKCGSVADAHRIFQTM--GTRDVVSFNTLISGFAANGHGKEAIK 479
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLG 461
M EEG++PDH+T+ +L+ACSHAGL++EG+ F + P V HYACMVD+LG
Sbjct: 480 LVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA----PTVDHYACMVDLLG 535
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA +I+ MP+ P+ V+G+LL A RIH GE+AA+ LF+LEP++ G +VL
Sbjct: 536 RAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVL 595
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
+SNIYA+ +W +V ++RE MK GLKK S +EY + F DR + K++YK
Sbjct: 596 LSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKL 655
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
+ + ++K G++ D SCAL DVE+E++E ML HSEKLA+ F ++ ++V KN
Sbjct: 656 LAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKN 715
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LR+C DCH+A + IS + R+I+VRD NRFH F G CSC+DYW
Sbjct: 716 LRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 178/404 (44%), Gaps = 61/404 (15%)
Query: 115 FVLKACASN-SLILEGKVVHGDIIRTGFLSDSYVQAALV----DMYAKCGQTDDGCKVFD 169
+ L A AS S I + + HG ++ S +Y + L+ ++A D +F
Sbjct: 2 YELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDS---IFT 58
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
D ++ M+ Y + + + LF+ T L + + G+ G++
Sbjct: 59 SSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLF- 117
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
H Y + ++D I+N+I+ MYA+ G V+ AR +F+ M +R L WNSM++G +
Sbjct: 118 ----HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
+G +EA++LF+ M N +T +V+
Sbjct: 174 SGNETEAVVLFNMMP----ARNIITWTSMVTG---------------------------- 201
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
YAK GDL++A F+++ ER+V SWN + + Y ++AL F QMLEE
Sbjct: 202 -------YAKMGDLESARRYFDEM--PERSVVSWNAMQSAYAQKECPKEALNLFHQMLEE 252
Query: 410 GVKPDHITFTSILSACSHAG---LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
G+ PD T+ +S+CS G L D + D + + VK ++DM + G L
Sbjct: 253 GITPDDTTWVVTISSCSSIGDPTLADSILR-MIDQKHIVLNSFVK--TALLDMHAKFGNL 309
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYLFQLEPE 509
A ++ ++ N W ++ A G+++ A LF P+
Sbjct: 310 EIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK 353
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/534 (39%), Positives = 334/534 (62%), Gaps = 23/534 (4%)
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV- 221
D + FDE+ + V T M + Y + +L LF+ + SDS ++V A+A+
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAM----IASDSASVVDEAAALV 57
Query: 222 -----GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG--NVEKARLVFDMMEK 274
++ D ++H F + + N+++ YA+ G ++E AR VFD ME
Sbjct: 58 AFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME- 116
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQN--SDCKPNPVTALILVSACTYLGSRQLGR 332
RD++SWNSM+ Y QNG ++EA+ L+ +M N K N V ++ AC + G+ Q G+
Sbjct: 117 RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGK 176
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
H ++ ++ + + +++DMY+KCG ++ A F I E+N+ SW+ +I GYGM
Sbjct: 177 HIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKI--KEKNILSWSAMITGYGM 234
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVK 451
HG G++ALE F++M G++P++ITF S+L+ACSHAGL+DEGR + M + ++ V+
Sbjct: 235 HGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVE 294
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQL 506
HY CMVD+LGRAGCL EA+ +IK+M + P+ ++WGALL ACRIH E++ LF+L
Sbjct: 295 HYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFEL 354
Query: 507 EPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRV 566
+ ++GY+VL+SNIYA + W++V ++R +K + ++KP +S E I F+ D+
Sbjct: 355 DASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKS 414
Query: 567 NPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLT 626
+P E+Y +E + ++ AGY+P+ LHD+++E++E L HSEKLAVAF +MN
Sbjct: 415 HPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSV 474
Query: 627 PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P +V+ + KNLRVC+DCH+A +FI+ I R+II+RD RFHHF+ G CSC DYW
Sbjct: 475 PRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 175/345 (50%), Gaps = 21/345 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTF---PFVL 117
AR F+ I + + M Y N +LEL+ M I+S+S + L
Sbjct: 3 ARRAFDEIPDPNP--VIVTAMASGYVRNNLVYHSLELFRAM----IASDSASVVDEAAAL 56
Query: 118 KACASNSLILEGKV---VHGDIIRTGFLSDSYVQAALVDMYAKCGQTD--DGCKVFDEMS 172
A ++++ + + V +H I + GF ++ V ++D YAK G D KVFD M
Sbjct: 57 VAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME 116
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQ--EGLLSDSVTIVSVASAVGQLGDVLKA 230
RD+VSW MI Y Q EA+ L+ K G+ ++V + +V A G +
Sbjct: 117 -RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 175
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H + E++ + SIV MY++CG VE A F +++++++SW++M+TGY +
Sbjct: 176 KHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 235
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+ EAL +F EM+ S +PN +T + +++AC++ G GR ++ + I+A +
Sbjct: 236 GRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYN-AMKQEFGIEAGVE 294
Query: 351 N--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+ ++D+ + G LD A ++ ++ + + + W L++ +H
Sbjct: 295 HYGCMVDLLGRAGCLDEAYSLIKEM-KVKPDAAIWGALLSACRIH 338
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/644 (37%), Positives = 367/644 (56%), Gaps = 54/644 (8%)
Query: 76 FLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
F+ N ++ YA NG L+ M R+ NS + +++L +
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+II ++V YAK G + + FDEM R +VSW M +AY Q E P+E
Sbjct: 191 NII---------TWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKE 241
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV-----HGYAICNAFLEDLCIQ 249
AL LF + +EG+ D T V S+ +GD A ++ + + N+F++ +
Sbjct: 242 ALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLD 301
Query: 250 ---------------------------NSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
N +++ Y R G + AR +FD M KRD++SWNS
Sbjct: 302 MHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNS 361
Query: 283 MLTGYIQNGQASEALLLFDEMQNS-DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
M+ GY QNG+++ ++ LF EM + D +P+ VT ++SAC ++G+ +L +
Sbjct: 362 MIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREK 421
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
N+K+ + N+++ MY+KCG + A +F + R+V S+N LI+G+ +GHG++A++
Sbjct: 422 NIKLGISGFNSLIFMYSKCGSVADAHRIFQTM--GTRDVVSFNTLISGFAANGHGKEAIK 479
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLG 461
M EEG++PDH+T+ +L+ACSHAGL++EG+ F + P V HYACMVD+LG
Sbjct: 480 LVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA----PTVDHYACMVDLLG 535
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA +I+ MP+ P+ V+G+LL A RIH GE+AA+ LF+LEP++ G +VL
Sbjct: 536 RAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVL 595
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
+SNIYA+ +W +V ++RE MK GLKK S +EY + F DR + K++YK
Sbjct: 596 LSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKL 655
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
+ + ++K G++ D SCAL DVE+E++E ML HSEKLA+ F ++ ++V KN
Sbjct: 656 LAELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKN 715
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LR+C DCH+A + IS + R+I+VRD NRFH F G CSC+DYW
Sbjct: 716 LRICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 178/404 (44%), Gaps = 61/404 (15%)
Query: 115 FVLKACASN-SLILEGKVVHGDIIRTGFLSDSYVQAALV----DMYAKCGQTDDGCKVFD 169
+ L A AS S I + + HG ++ S +Y + L+ ++A D +F
Sbjct: 2 YELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDS---IFT 58
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
D ++ M+ Y + + + LF+ T L + + G+ G++
Sbjct: 59 SSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNMF- 117
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
H Y + ++D I+N+I+ MYA+ G V+ AR +F+ M +R L WNSM++G +
Sbjct: 118 ----HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWK 173
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
+G +EA++LF+ M N +T +V+
Sbjct: 174 SGNETEAVVLFNMMP----ARNIITWTSMVTG---------------------------- 201
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
YAK GDL++A F+++ ER+V SWN + + Y ++AL F QMLEE
Sbjct: 202 -------YAKMGDLESARRYFDEM--PERSVVSWNAMQSAYAQKECPKEALNLFHQMLEE 252
Query: 410 GVKPDHITFTSILSACSHAG---LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
G+ PD T+ +S+CS G L D + D + + VK ++DM + G L
Sbjct: 253 GITPDDTTWVVTISSCSSIGDPTLADSILR-MIDQKHIVLNSFVK--TALLDMHAKFGNL 309
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYLFQLEPE 509
A ++ ++ N W ++ A G+++ A LF P+
Sbjct: 310 EIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPK 353
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/678 (34%), Positives = 371/678 (54%), Gaps = 22/678 (3%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L C + R IHS + SGL Q L + + Y G + A+ +F+ S
Sbjct: 235 LSVCAKIRQARAIHSIVRESGL-EQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVS 293
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
WN M+ AYA +GH E L++ M GI + T C+S G+++H
Sbjct: 294 --WNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRF---GRMIHAC 348
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+ G D + AL+DMY +CG ++ +F+ + + VSW MI Q + + A
Sbjct: 349 ALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRA 407
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA----VHGYAICNAFLEDLCIQNS 251
L LFQ+ Q EG+ T +++ AV + +A A +H + + + I +
Sbjct: 408 LELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTA 467
Query: 252 IVAMYARCGNVEKARLVFD---MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+V MYA CG +++A F M ++ D++SWN++++ Q+G AL F M
Sbjct: 468 VVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGV 527
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
PN +T + ++ AC + G H ++ +S M+ + + A+ MY +CG L++A
Sbjct: 528 APNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESARE 587
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F + ER+V +N +IA Y +G +AL+ F +M +EG +PD +F S+LSACSH
Sbjct: 588 IFEKV-AVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHG 646
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL DEG + F M + + P HYAC VD+LGRAG L +A ++I+ M + P VW
Sbjct: 647 GLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKT 706
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACR + G +A + + +L+P +V++SNI A + KW E ++R +M+++GL
Sbjct: 707 LLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGL 766
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
+K A S IE + F DR +P +E+Y+++E + EI+ GY+PD L V++
Sbjct: 767 RKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDE 826
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
++E +L HSE+LA+A G+M+ + + V+V KNLRVC DCH+A +FIS I ++I+VRD
Sbjct: 827 AEKERLLCQHSERLAIALGVMSSSTD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRD 885
Query: 663 ANRFHHFEGGTCSCNDYW 680
+RFHHF G+CSC DYW
Sbjct: 886 THRFHHFVDGSCSCGDYW 903
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 237/483 (49%), Gaps = 21/483 (4%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
L+ R+IH+ + + GL + LG ++ Y +F+ + S W
Sbjct: 43 RLLSQGRRIHARIVSLGLEEE---LGNHLLRLYLKCESLGDVEEVFSRLEVRDEAS--WT 97
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
T+I AY +G + ++ M++ G+ ++ TF VLKACA + +G+ +H I+ +
Sbjct: 98 TIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVES 157
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
G S + L+ +Y CG +F+ M RDLVSW I A Q+ + AL LF
Sbjct: 158 GLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELF 216
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
Q+ Q EG+ +T+V S + + +A+A+H + + L + ++ + YAR
Sbjct: 217 QRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARL 273
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G++++A+ VFD +RD++SWN+ML Y Q+G SEA LLF M + P+ VT LV
Sbjct: 274 GHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT---LV 330
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+A T S + GR H + + D L NA++DMY +CG + A ++F I P N
Sbjct: 331 NASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI-PG--N 387
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS----HAGLIDEGR 435
SWN +IAG G ++ALE F +M EG+ P T+ ++L A + A + EGR
Sbjct: 388 AVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGR 447
Query: 436 KCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV--WGALLLACR 493
K + + E +V M G + EA ++ + V W A++ +
Sbjct: 448 KLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLS 507
Query: 494 IHG 496
HG
Sbjct: 508 QHG 510
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 219/440 (49%), Gaps = 24/440 (5%)
Query: 107 SSNSYTFPF----VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
SS+ T P +L+A + L+ +G+ +H I+ G + + L+ +Y KC
Sbjct: 22 SSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLG 79
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
D +VF + VRD SWT +ITAY + + + A+ +F + QQEG+ D+VT ++V A
Sbjct: 80 DVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACA 139
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
+LGD+ + +++H + + + + N ++ +Y CG V A L+F+ ME RDL+SWN+
Sbjct: 140 RLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNA 198
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
+ Q+G AL LF MQ +P +T +I +S C + RQ R H + S
Sbjct: 199 AIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKI--RQ-ARAIHSIVRESG 255
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
++ + A+ YA+ G LD A+ +F+ +ER+V SWN ++ Y HGH +A
Sbjct: 256 LEQTLVVSTALASAYARLGHLDQAKEVFD--RAAERDVVSWNAMLGAYAQHGHMSEAALL 313
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
F++ML EG+ P +T + + CS + GR A + + ++ ++DM R
Sbjct: 314 FARMLHEGIPPSKVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTR 370
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYLFQ------LEPEHTGYFV 515
G EA + + +P N W ++ G++ A LFQ + P Y
Sbjct: 371 CGSPEEARHLFE--GIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLN 428
Query: 516 LMSNIYAASNKWREVGKLRE 535
L+ + + + R + + R+
Sbjct: 429 LLEAVASNPEEARAMAEGRK 448
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 240/673 (35%), Positives = 375/673 (55%), Gaps = 18/673 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L++C + R ++H+ + G ++ L A ++ Y G+ AR +F+ +
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNA-LVTMYAKCGDIVAARKVFDGMAVT 261
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI + N C LEL+ TM + + N T V A S + K
Sbjct: 262 DCIS--WNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKE 319
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG ++ GF D +L+ MY G+ D K+F M +D +SWT MI+ YE+
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGF 379
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P++AL ++ + + D VTI S +A LG + +H A F+ + + N+
Sbjct: 380 PDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANA 439
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MYA+ +++KA VF M ++D++SW+SM+ G+ N ++ EAL F M KPN
Sbjct: 440 LLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPN 498
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + +SAC G+ + G++ H Y++ + + + NA++D+Y KCG A F+
Sbjct: 499 SVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFS 558
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+H SE++V SWN++++G+ HG G AL F+QM+E G PD +TF ++L ACS AG++
Sbjct: 559 -VH-SEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMV 616
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+G + F MT K S+ P +KHYACMVD+L R G L EA+++I +MP+ P+ +VWGALL
Sbjct: 617 IQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLN 676
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
CRIH GE+AA + +LEP Y VL+ ++Y + KW +V ++R+ M+ KGL++
Sbjct: 677 GCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQD 736
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S +E F T D +P KE+ + + +K G+ P S +V ++D
Sbjct: 737 NGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVSEDD- 795
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+L HSE+LAVAFG++N TP + VTKN C CH F+ IS I RR+I VRD +
Sbjct: 796 --ILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQ 853
Query: 666 FHHFEGGTCSCND 678
H F+ G CSC D
Sbjct: 854 LHCFKDGDCSCGD 866
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 231/464 (49%), Gaps = 13/464 (2%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQ-----ALHLGAKIIIKYTTYGEPNT 60
P EG Y L + C + R + + + + L LG ++ +GE
Sbjct: 93 PPDEGAYVALFRLCEWR---RAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWH 149
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +F + +S WN M+ Y G E L+LY M +G+ + YTFP VL+ C
Sbjct: 150 AWRVFAKMPERDVFS--WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTC 207
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
G+ VH ++R GF + V ALV MYAKCG KVFD M+V D +SW
Sbjct: 208 GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWN 267
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI + + + E L LF + + + +TI SV A G L +V A+ +HG+A+
Sbjct: 268 AMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKR 327
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F D+ NS++ MY G + A +F ME +D +SW +M++GY +NG +AL ++
Sbjct: 328 GFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVY 387
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
M+ + P+ VT ++AC LG +G K H N + NA+++MYAK
Sbjct: 388 ALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKS 447
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
+D A +F + +E++V SW+ +IAG+ + +AL +F ML VKP+ +TF +
Sbjct: 448 KHIDKAIEVFKFM--AEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIA 504
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
LSAC+ G + G++ A + + + E ++D+ + G
Sbjct: 505 ALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 548
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/667 (34%), Positives = 373/667 (55%), Gaps = 43/667 (6%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNS 110
Y GE + AR +F+ + S W +MI YA + ++L+ M R + NS
Sbjct: 178 YAECGELDCARKVFDEMSERNVVS--WTSMICGYARREFAKDAVDLFFRMVRDEDVIPNS 235
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
T V+ ACA + G+ V+ I +G + + +ALVDMY KC D ++FDE
Sbjct: 236 VTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDE 295
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+L M + Y + +EAL + G+ D ++++S S+ QL ++L
Sbjct: 296 YGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWG 355
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
++ HGY + N F I N+++ MY +C + A +FD M + +++WNS++ GYI+N
Sbjct: 356 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIEN 415
Query: 291 GQA-------------------------------SEALLLFDEMQNSDC-KPNPVTALIL 318
G+ EA+ +F MQ+ +C + VT + +
Sbjct: 416 GEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSI 475
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
SAC +LG+ L + + YI + +++D L ++DM+++CGD ++A ++FN + + R
Sbjct: 476 ASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL--TNR 533
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+VS+W I M G+ +A+E F++M+E+G+KPD + F L+AC H GL+ +G++ F
Sbjct: 534 DVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIF 593
Query: 439 ADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
M KL V PE HY CMVD+LGRAG L EA +IK MP PND +W +LL ACR+ G
Sbjct: 594 NSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGN 653
Query: 498 I-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
+ AA + L PE TG +VL+SN+YA++ +W ++ K+R MK KGL+KP SVI+
Sbjct: 654 VEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQ 713
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYH 612
F + D +P +++ ++ ++ G++PDLS L DV+++++ ML+ H
Sbjct: 714 IRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRH 773
Query: 613 SEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
SEKLA+AFG+++ +++ KNLRVC+ CHS +F S +Y R+II+RD NRFH G
Sbjct: 774 SEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQG 833
Query: 673 TCSCNDY 679
CSC+D+
Sbjct: 834 KCSCSDF 840
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 255/486 (52%), Gaps = 42/486 (8%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
LK+C + L+ H SLT GL + + K++ + G + N +SY
Sbjct: 38 LKNCKTIDELKMFHLSLTKQGLDDDVSAI-TKLVARSCELGTRESLSFAKEVFENGESYG 96
Query: 76 --FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F++N++IR YA++G C E + L+ M SGIS + YTFPF L CA + G +H
Sbjct: 97 TCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIH 156
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G II+ + D +VQ +LV YA+CG+ D KVFDEMS R++VSWT MI Y + E +
Sbjct: 157 GLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAK 216
Query: 194 EAL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQN 250
+A+ + F+ + E ++ +SVT+V V SA +L D+ + V+ + I ++ +E DL I +
Sbjct: 217 DAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDF-IRDSGIEVNDLMI-S 274
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MY +C ++ A+ +FD +L N+M + Y++ G EAL + + M +S +P
Sbjct: 275 ALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRP 334
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ ++ L +S+C+ L + G+ HGY++ + + + NA++DMY KC DTA +F
Sbjct: 335 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 394
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE---------------------- 408
+ + S + V +WN ++AGY +G A E F+ M E
Sbjct: 395 DRM--SNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEA 452
Query: 409 ----------EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
E V D +T SI SAC H G +D + + + K ++ +V+ +VD
Sbjct: 453 IEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVD 512
Query: 459 MLGRAG 464
M R G
Sbjct: 513 MFSRCG 518
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
I + LG ++ ++ G+P +A S+FNS+ N + W I A A G+ +EL
Sbjct: 500 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA--WTAAIGAMAMAGNVERAIEL 557
Query: 98 YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQ-AALVDMYA 156
++ M G+ + F L AC L+ +GK + + + +S V +VD+
Sbjct: 558 FNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLG 617
Query: 157 KCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKPEEALILFQKTQ 203
+ G ++ ++ +M + V W ++ A E A +K Q
Sbjct: 618 RAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQ 665
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 347/589 (58%), Gaps = 18/589 (3%)
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
M R G+ +++ T+ ++K C++ + EGK VH I G+ +V L++MY K
Sbjct: 45 AMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFN 104
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQA--EKPEEALILFQKTQQEGLLSDSVTIVSV 217
++ +FDEM R++VSWT MI+AY +K + LIL + EG+ + T SV
Sbjct: 105 LLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFR---EGVRPNMFTYSSV 161
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
A L ++ + +H I D+ ++++++ +Y++ +++ A VFD M RDL
Sbjct: 162 LRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDL 218
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
+ WNS++ G+ QN +EAL LF M+ + + T ++ ACT L +LGR+ H +
Sbjct: 219 VVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVH 278
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
++ + D L NA++DMY KCG L+ A + F+ + E++V SW+ ++AG +G+ R
Sbjct: 279 VLKFDQ--DLILNNALIDMYCKCGSLEDANSAFSRM--VEKDVISWSTMVAGLAQNGYSR 334
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACM 456
+ALE F M E G +P++IT +L ACSHAGL+++G F M KL V P +HY C+
Sbjct: 335 QALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCL 394
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHT 511
+D+LGRAG L EA +I +M P+ W LL ACR+H + AA + +LEPE
Sbjct: 395 IDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDA 454
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G ++L+SNIYA + +W +V ++R+ M N+G++K S IE K I F D +P +
Sbjct: 455 GTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIE 514
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
E+ +++ + + GY+PD + L D+E E +E L YHSEKLA+ FG+MNL+ E V
Sbjct: 515 EIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTV 574
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ KNLR+C DCH + +S + R I++RD R+HHF+ G CSC DYW
Sbjct: 575 RIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 204/392 (52%), Gaps = 26/392 (6%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+K C+ ++ +++H + G + + ++ Y + A LF+ +
Sbjct: 58 YSELIKCCSARGAVQEGKRVHEHIFCKGY-EPKMFVVNTLLNMYVKFNLLEEAEDLFDEM 116
Query: 69 HNDKSYSFLWNTMIRAYAN--NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
S W TMI AY+N N ++ L L M R G+ N +T+ VL+AC +
Sbjct: 117 PERNVVS--WTTMISAYSNKLNDKALKCLIL---MFREGVRPNMFTYSSVLRACDG---L 168
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+ +H II+TG SD +V++AL+D+Y+K D+ VFDEM RDLV W +I +
Sbjct: 169 PNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGF 228
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q EAL LF++ ++ G L+D T+ SV A L + + VH + + F +DL
Sbjct: 229 AQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL--KFDQDL 286
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N+++ MY +CG++E A F M ++D+ISW++M+ G QNG + +AL LF+ M+ S
Sbjct: 287 ILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKES 346
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK---IDATLRN--AVMDMYAKCG 361
+PN +T L ++ AC++ G + G Y S K +D + ++D+ + G
Sbjct: 347 GSRPNYITVLGVLFACSHAGLVEKG----WYYFRSMKKLFGVDPGREHYGCLIDLLGRAG 402
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
LD A + +++ E + +W L+ +H
Sbjct: 403 RLDEAVKLIHEME-CEPDSVTWRTLLGACRVH 433
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/661 (34%), Positives = 365/661 (55%), Gaps = 43/661 (6%)
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGISSNSYTFPFV 116
P+ R LF S+ + S+ N +I +++ G +++LY + +R + T +
Sbjct: 96 PDMER-LFASMPERDAVSY--NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAM 152
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV--- 173
+ ++ S G VH ++R GF + ++V + LVDMYAK G D +VF EM
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212
Query: 174 ----------------------------RDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
RD ++WT M+T Q EAL +F++ + E
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ D T S+ +A G L + + + +H Y + +++ + +++V MY++C ++ A
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF M R++ISW +M+ GY QN + EA+ F EMQ KP+ T ++S+C L
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
S + G +FH + S + T+ NA++ +Y KCG ++ A +F+++ S + SW
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM--SFHDQVSWTA 450
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-L 444
L+ GY G ++ ++ F +ML G+KPD +TF +LSACS AGL+++G F M K
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH 510
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----A 499
+ P HY CM+D+ R+G EA + IKQMP P+ W LL +CR+ G + A
Sbjct: 511 GIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWA 570
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A L + +P++ +VL+ +++AA +W EV LR M+++ +KK S I+Y +
Sbjct: 571 AENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHI 630
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F D+ +P+ +Y+K+E + ++ GY PD+S LHDV D D+ HM+++HSEKLA+A
Sbjct: 631 FSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIA 690
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG++ + E +++ KNLRVC DCH+A +FIS I R I+VRDA RFH F GTCSC D+
Sbjct: 691 FGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDF 750
Query: 680 W 680
W
Sbjct: 751 W 751
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 142/341 (41%), Gaps = 65/341 (19%)
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQNSIVAMYARCGNVEKARLVFD- 270
I+S A+ G V A AVH I FL+ + N ++ YA+ G + +AR VFD
Sbjct: 15 ILSSAAGDGGRTGVRVAGAVHCL-ILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDE 73
Query: 271 ------------------------------MMEKRDLISWNSMLTGYIQNGQASEALLLF 300
M +RD +S+N+++TG+ G + ++ L+
Sbjct: 74 MPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLY 133
Query: 301 DE-MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
++ +P +T ++ + L R LG H ++ A + + ++DMYAK
Sbjct: 134 RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAK 193
Query: 360 CGDLDTAENMFNDIHPS-----------------------------ERNVSSWNVLIAGY 390
G + A +F ++ +R+ +W ++ G
Sbjct: 194 MGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGL 253
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+G +AL+ F +M EGV D TF SIL+AC ++EG++ A +T+ + V
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNV 313
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ +VDM + + A + ++M N W A+++
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTC-RNIISWTAMIVG 353
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/595 (37%), Positives = 353/595 (59%), Gaps = 10/595 (1%)
Query: 93 ETLELYSTMRRSGI-SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAAL 151
E LEL+ + +G +S T+ ++ AC I K V +I +G D Y++ +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ M+ KCG D ++FDEM ++++SW +I A EA LF Q+ + S
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
V++ A LG + + +H ++ D+ + +++ MY++CG++E A+ VFD
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M ++ + WNS++ GY +G + EAL ++ EM++S K + T I++ C L S +
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ H ++ +D A++D+Y+K G ++ A+++F D+ P +NV SWN LIAGYG
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF-DMMP-HKNVISWNALIAGYG 410
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEV 450
HG G +A+E F +ML EG+ P+H+TF ++LSACS++GL D G + F M++ +KP
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
HYACM+++LGR G L EAF +IK P P ++W ALL ACR+H G+ AA L+
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
+ PE +V++ NIY S + E + + +K +GL+ A S IE K GF + D+
Sbjct: 531 MGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+ KE+Y+K++ + +EI GY+P L DV DE E +L YHSEKLA+AFG++N
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDV-DEQEERVLLYHSEKLAIAFGLINT 649
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +Q+ ++ R+C DCHSA + I+ + RR+I+VRDA+RFHHF+ G+CSC DYW
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 218/443 (49%), Gaps = 15/443 (3%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD L+ +C L S+R ++ + + SGL + +L ++++ + G AR LF+ +
Sbjct: 134 YDALVSACIGLKSIRGVKKVFNYMINSGL-DPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WNT+I + G E L+ M + + S F +++A A LI
Sbjct: 193 PEKNILS--WNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFA 250
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H ++TG D +V AL+DMY+KCG +D VFD+M + V W +I Y
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYAL 310
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL ++ + + G+ D+ T + +L + A+ H + + F D+
Sbjct: 311 HGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVA 370
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++V +Y++ G +E A+ VFDMM +++ISWN+++ GY +G+ EA+ +F+ M +
Sbjct: 371 NTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGM 430
Query: 309 KPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN VT L ++SAC+Y G G + F + +K A ++++ + G LD A
Sbjct: 431 VPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAF 490
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE--GVKPDHIT-FTSILSA 424
+ D P + V+ W L+ +H K E E+ G+ P+ ++ + +L+
Sbjct: 491 ALIKDA-PFKPTVNMWAALLTACRVH----KNFELGKFAAEKLYGMGPEKLSNYVVLLNI 545
Query: 425 CSHAGLIDEGRKCFADMTKLSVK 447
+ +G ++E + + ++
Sbjct: 546 YNRSGRLEEAAAVIQTLKRRGLR 568
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/581 (38%), Positives = 336/581 (57%), Gaps = 11/581 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
N + +L++C + + G+ +H ++ +G D+ + LVD+YA CG ++F
Sbjct: 62 NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121
Query: 169 DEMSVR-DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL-SDSVTIVSVASAVGQLGD 226
DEM + ++ W V+I AY + E A+ L+++ G + D+ T V A L D
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ + VH + ++ D+ + ++ MYA+CG V++A VFD RD + WNSM+
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
QNG+ +EAL L M P VT + +SA G+ GR+ HGY
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
L+ +++DMYAK G + A +F+ + R + SWN +I G+GMHGH A E F +M
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLF--HRELISWNAMICGFGMHGHADHACELFRRM 359
Query: 407 LEEG-VKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAG 464
E V PDHITF +LSAC+H G++ E ++ F M T S+KP V+HY C+VD+LG +G
Sbjct: 360 RNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSG 419
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
EA D+IK M + P+ +WGALL C+IH E+A + L +LEPE G +VL+SN
Sbjct: 420 RFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSN 479
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IYA S KW E ++R+ M N+GLKK A S IE GF D +P E+Y+++E
Sbjct: 480 IYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELER 539
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ I GY+PD + H+VED+++ +M+ HSE+LA+AFG+++ P + VTKNLRV
Sbjct: 540 LEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRV 599
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH + IS I +R+II+RD NR+HHF G CSC D+W
Sbjct: 600 CEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 9/281 (3%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +LK+C L L R++H + + + A +I Y G + A ++F+S
Sbjct: 169 YPPVLKACAALLDLGAGREVHDRVMRTSWAADVF-VCAGLIDMYAKCGCVDEAWAVFDS- 226
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ +WN+MI A NG E L L M GI+ T + A A +
Sbjct: 227 -TTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPR 285
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +HG R GF S ++ +L+DMYAK G +FD++ R+L+SW MI +
Sbjct: 286 GRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGM 345
Query: 189 AEKPEEALILFQKTQQEG-LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ A LF++ + E ++ D +T V V SA G V +A+ V + ++ +
Sbjct: 346 HGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMV 405
Query: 248 IQ-NSIVAMYARCGNVEKARLVFD-MMEKRDLISWNSMLTG 286
+V + G ++A V M+ K D W ++L G
Sbjct: 406 QHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNG 446
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/641 (34%), Positives = 360/641 (56%), Gaps = 51/641 (7%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN MI A + +G E L L M R G+ +S T+ L ACA + GK +H +I
Sbjct: 238 WNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI 297
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R+ D YV +AL+++YAKCG + +VF+ + R+ VSWTV+I Q E +++
Sbjct: 298 RSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVE 357
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF + + E + D + ++ S D+ + +H + + + + NS++++YA
Sbjct: 358 LFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYA 417
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-------------- 303
+CG+++ A VF M +RD++SW SM+T Y Q G +A FD M
Sbjct: 418 KCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGA 477
Query: 304 ------------------QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
D P+ VT + L C +G+ +LG + G+ + + + +
Sbjct: 478 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL 537
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ ++ NA + MY+KCG + A+ +F+ ++ ++V SWN +I GY HG G++A + F
Sbjct: 538 NVSVANAAITMYSKCGRISEAQKLFDLLNG--KDVVSWNAMITGYSQHGMGKQAAKTFDD 595
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAG 464
ML +G KPD+I++ ++LS CSH+GL+ EG+ F MT++ + P ++H++CMVD+LGRAG
Sbjct: 596 MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAG 655
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSN 519
L EA D+I +MP+ P VWGALL AC+IHG E+AA ++F+L+ +G ++L++
Sbjct: 656 HLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAK 715
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+ + K + ++R+ M++KG+KK +S +E + F D +P + K++
Sbjct: 716 IYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDE 775
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ +I GY+ + R + +HSEKLAVAFGIM+L + + KNLR+
Sbjct: 776 LMEKIAHLGYVR---------TESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRI 824
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+ + IS + R+ ++RD RFHHF+ G+CSC DYW
Sbjct: 825 CGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 143/564 (25%), Positives = 248/564 (43%), Gaps = 86/564 (15%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNS 110
Y G + A LF+ + S WNT++ Y ++ LE + +M RSG S N+
Sbjct: 81 YAKQGSLSDAEELFDRMPRRDVAS--WNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNA 138
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF-- 168
+TF V+K+C + + G + F D V+ ALVDM+ +CG D ++F
Sbjct: 139 FTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQ 198
Query: 169 -----------------------------DEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
++M+ RD+VSW +MI A Q+ + EAL L
Sbjct: 199 IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLV 258
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ ++G+ DS T S +A +L + + +H I + D + ++++ +YA+C
Sbjct: 259 VEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC 318
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G+ ++A+ VF+ ++ R+ +SW ++ G +Q S+++ LF++M+ + L+
Sbjct: 319 GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI 378
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
S C LGR+ H + S + N+++ +YAKCGDL AE +F+ + SER+
Sbjct: 379 SGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSM--SERD 436
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQM--------------------LEEGVK------- 412
+ SW +I Y G+ KA EFF M E+G+K
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 496
Query: 413 -----PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
PD +T+ ++ C+ G G + K + V + M + G +
Sbjct: 497 QKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRIS 556
Query: 468 EA---FDMIKQMPLPPNDSV-WGALLLACRIHG---EIAANYLFQL----EPEHTGYFVL 516
EA FD+ L D V W A++ HG + A + L +P++ Y +
Sbjct: 557 EAQKLFDL-----LNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAV 611
Query: 517 MSNIYAASNKWREVGKLREDMKNK 540
+S + + + GKL DM +
Sbjct: 612 LSG--CSHSGLVQEGKLYFDMMTR 633
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 159/373 (42%), Gaps = 66/373 (17%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV--------- 167
L++C S + + +HG ++ G S ++Q L+ Y CG D ++
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 168 -----------------------FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
FD M RD+ SW +++ Y QA + + L F +
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 205 EG-LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
G L ++ T V + G LG A + G F D ++ ++V M+ RCG V+
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 264 KARLVFDMMEK-------------------------------RDLISWNSMLTGYIQNGQ 292
A +F +E+ RD++SWN M+ Q+G+
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
EAL L EM + + T ++AC L S G++ H +I S +ID + +A
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++++YAKCG A+ +FN + +RN SW VLI G + K++E F+QM E +
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQ--DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 413 PDHITFTSILSAC 425
D +++S C
Sbjct: 369 IDQFALATLISGC 381
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 51/306 (16%)
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE------------DLCIQNSIVAM 255
L + V +ASAV L+ +H Y C A + ++ N ++
Sbjct: 26 LHGRLVTVGLASAV-----FLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNG 80
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS-DCKPNPVT 314
YA+ G++ A +FD M +RD+ SWN++++GY Q + + L F M S D PN T
Sbjct: 81 YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
++ +C LG R+L + G + D + A++DM+ +CG +D A +F+ I
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200
Query: 375 P-----------------------------SERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ER+V SWN++IA G R+AL +
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY--ACMVDMLGRA 463
M +GV+ D T+TS L+AC+ + G++ A + + P++ Y + ++++ +
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR--SLPQIDPYVASALIELYAKC 318
Query: 464 GCLYEA 469
G EA
Sbjct: 319 GSFKEA 324
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN-DIHPSE 377
+ +C G+ R HG ++ + L+N ++ Y CG L A + DI E
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI--KE 68
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
NV + N+++ GY G A E F +M + D ++ +++S A +G +
Sbjct: 69 PNVITHNIMMNGYAKQGSLSDAEELFDRM----PRRDVASWNTLMSGYFQARRFLDGLET 124
Query: 438 FADMTKLSVK-PEVKHYACMVDMLGRAGC 465
F M + P + C++ G GC
Sbjct: 125 FVSMHRSGDSLPNAFTFCCVMKSCGALGC 153
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/684 (34%), Positives = 379/684 (55%), Gaps = 55/684 (8%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---ARSL 64
T+ LL +C L +L+Q+H+ + +GL + G ++ ++ P+ AR L
Sbjct: 4 TQHLCSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLL--HSAVSVPDALDYARRL 61
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISS-NSYTFPFVLKACASN 123
F +H F+ NT+IR A + +L + MRR + +S++F F+LKA AS
Sbjct: 62 F--LHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASY 119
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ G +H I G + +V LV MY++CG KVF+EM ++V+W ++
Sbjct: 120 RSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVV 179
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
TA + + A ++F + L S
Sbjct: 180 TACFRCGDVKGADMMFNRMPFRNLTS---------------------------------- 205
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
N ++A Y + G +E AR +F M +D +SW++M+ G+ NG EA F E+
Sbjct: 206 -----WNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFREL 260
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
Q +PN V+ +SAC G+ + G+ HG+I S ++ NA++D Y+KCG++
Sbjct: 261 QQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNV 320
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A +F + P +R++ SW +IAG MHG+G +A++ F +M E G++PD I F SIL
Sbjct: 321 GMARLVFERM-PEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILY 379
Query: 424 ACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
ACSHAGLI++G + F M + +++P ++HY CMVD+ GRAG L +A++ I MP+ P
Sbjct: 380 ACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTA 439
Query: 483 SVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+W LL AC IHG + L +L+P ++G VL+SNIYA + KW++V +R M
Sbjct: 440 IIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSM 499
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG-YMPDLSCA 596
++ + K +S+IE K + F + N +E Y+K++ + +++++ G Y+P++
Sbjct: 500 TDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSV 559
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
LHD+EDE++E ++ HSEKLAVAFGI L +++++ KNLRVC DCH+ + IS +Y
Sbjct: 560 LHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGL 619
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
+I+VRD +RFH F+ G+CSC DYW
Sbjct: 620 EIVVRDRSRFHSFKTGSCSCRDYW 643
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/641 (34%), Positives = 360/641 (56%), Gaps = 51/641 (7%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN MI A + +G E L L M R G+ +S T+ L ACA + GK +H +I
Sbjct: 228 WNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI 287
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R+ D YV +AL+++YAKCG + +VF+ + R+ VSWTV+I Q E +++
Sbjct: 288 RSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVE 347
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF + + E + D + ++ S D+ + +H + + + + NS++++YA
Sbjct: 348 LFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYA 407
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-------------- 303
+CG+++ A VF M +RD++SW SM+T Y Q G +A FD M
Sbjct: 408 KCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGA 467
Query: 304 ------------------QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
D P+ VT + L C +G+ +LG + G+ + + + +
Sbjct: 468 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL 527
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ ++ NA + MY+KCG + A+ +F+ ++ ++V SWN +I GY HG G++A + F
Sbjct: 528 NVSVANAAITMYSKCGRISEAQKLFDLLNG--KDVVSWNAMITGYSQHGMGKQAAKTFDD 585
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAG 464
ML +G KPD+I++ ++LS CSH+GL+ EG+ F MT++ + P ++H++CMVD+LGRAG
Sbjct: 586 MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAG 645
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSN 519
L EA D+I +MP+ P VWGALL AC+IHG E+AA ++F+L+ +G ++L++
Sbjct: 646 HLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAK 705
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+ + K + ++R+ M++KG+KK +S +E + F D +P + K++
Sbjct: 706 IYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDE 765
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ +I GY+ + R + +HSEKLAVAFGIM+L + + KNLR+
Sbjct: 766 LMEKIAHLGYVR---------TESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRI 814
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+ + IS + R+ ++RD RFHHF+ G+CSC DYW
Sbjct: 815 CGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 52/497 (10%)
Query: 3 RLGPS--TEGFYDQLLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGE 57
RL P T+ D L +SC LA R +H L T GL + A+ L ++ Y + G
Sbjct: 13 RLLPHAVTQALADAL-RSCGSRGALAGARALHGRLVTVGLAS-AVFLQNTLLHAYLSCGA 70
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
+ AR L + + + N M+ YA G + EL+ M R ++S +
Sbjct: 71 LSDARRLLRADIKEPNV-ITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTS 129
Query: 118 K------ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF--- 168
+ +C + + G + F D V+ ALVDM+ +CG D ++F
Sbjct: 130 RPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI 189
Query: 169 ----------------------------DEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
++M+ RD+VSW +MI A Q+ + EAL L
Sbjct: 190 ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 249
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ ++G+ DS T S +A +L + + +H I + D + ++++ +YA+CG
Sbjct: 250 EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 309
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
+ ++A+ VF+ ++ R+ +SW ++ G +Q S+++ LF++M+ + L+S
Sbjct: 310 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 369
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
C LGR+ H + S + N+++ +YAKCGDL AE +F+ + SER++
Sbjct: 370 GCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSM--SERDI 427
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
SW +I Y G+ KA EFF M + IT+ ++L A G ++G K ++
Sbjct: 428 VSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSA 483
Query: 441 M-TKLSVKPEVKHYACM 456
M ++ V P+ Y +
Sbjct: 484 MLSQKDVTPDWVTYVTL 500
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/663 (34%), Positives = 367/663 (55%), Gaps = 12/663 (1%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
+RQ+HS + G + L + ++ Y A LFN I S +F N ++
Sbjct: 217 VRQVHSHVIKLGY-DSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTF--NALLTG 273
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
Y+ G E + L+ M+ G +TF +L A I G+ VHG +++ F+ +
Sbjct: 274 YSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWN 333
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V AL+D Y+K + + K+F EM D +S+ V++T Y + +E+L LF++ Q
Sbjct: 334 VFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQF 393
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G + ++ S ++ + +H I + ++ + NS+V MYA+CG +
Sbjct: 394 TGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGE 453
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A +F + + + W +M++ Y+Q G + L LF EMQ + + T +V AC
Sbjct: 454 ANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACAS 513
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
L S LG++ H +II S + +A++DMYAKCG + A MF ++ RN SWN
Sbjct: 514 LASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEM--PVRNSVSWN 571
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
LI+ Y +G G L F +M+ G++PD ++ SIL ACSH GL++EG + F MT++
Sbjct: 572 ALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRI 631
Query: 445 -SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
+ P+ +HYA +DML R G EA ++ QMP P++ +W ++L +C IH +
Sbjct: 632 YKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKK 691
Query: 499 AANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AAN LF ++ +V MSNIYAA+ +W VGK+++ M+ +G+KK A+S +E
Sbjct: 692 AANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKT 751
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D+ +P +E+ KK++ + ++ GY PD SCALH+V++E + L YHSE++A
Sbjct: 752 HVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIA 811
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+AF +++ + + V KNLR C DCH+A + IS I RR+I VRD++RFHHF G C+C
Sbjct: 812 IAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCR 871
Query: 678 DYW 680
DYW
Sbjct: 872 DYW 874
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 225/452 (49%), Gaps = 9/452 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I+ Y G + AR+LF+S+ + + W +I YA N E L+ M R GI
Sbjct: 138 MIMGYIKSGNLSEARTLFDSMFQRTAVT--WTMLIGGYAQNNQFREAFGLFIEMGRHGID 195
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ + +L + E + VH +I+ G+ S V +L+D Y K ++
Sbjct: 196 PDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQL 255
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F+++ RD V++ ++T Y + EA+ LF K Q+ G T ++ +A QL D+
Sbjct: 256 FNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDI 315
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
Q VHG+ + F+ ++ + N+++ Y++ V +A +F M + D IS+N ++T Y
Sbjct: 316 EFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCY 375
Query: 288 IQNGQASEALLLFDEMQNS--DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
NG+ E+L LF E+Q + D + P L+ ++A + + +GR+ H I ++
Sbjct: 376 AWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISL--NLDIGRQIHSQTIVTDAIS 433
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ + N+++DMYAKCG+ A +F+D+ + ++ W +I+ Y G L+ F +
Sbjct: 434 EILVGNSLVDMYAKCGEFGEANRIFSDL--AIQSSVPWTAMISSYVQKGLHEDGLKLFVE 491
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M + D T+ SI+ AC+ + G++ + + V + +VDM + G
Sbjct: 492 MQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGS 551
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ +A M ++MP+ N W AL+ A +G+
Sbjct: 552 IKDALQMFQEMPV-RNSVSWNALISAYAQNGD 582
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 193/414 (46%), Gaps = 47/414 (11%)
Query: 116 VLKACASN---SLILEGKVVHGD--IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
++K C N +L +H D II+TGF ++Y LV + + G + K+FDE
Sbjct: 67 IIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDE 126
Query: 171 MSVRDL-------------------------------VSWTVMITAYEQAEKPEEALILF 199
M +++ V+WT++I Y Q + EA LF
Sbjct: 127 MPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLF 186
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ + G+ D V++ ++ S + V + + VH + I + L + NS++ Y +
Sbjct: 187 IEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKT 246
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
++ A +F+ + +RD +++N++LTGY + G EA+ LF +MQ +P T ++
Sbjct: 247 RSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAIL 306
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+A L + G++ HG+++ N + + NA++D Y+K + A +F ++ E +
Sbjct: 307 TAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEM--PEVD 364
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
S+NVL+ Y +G +++LE F ++ G + F ++LS + + +D GR+ +
Sbjct: 365 GISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHS 424
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEA----FDMIKQMPLPPNDSVWGALL 489
E+ +VDM + G EA D+ Q +P W A++
Sbjct: 425 QTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVP-----WTAMI 473
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 5/265 (1%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N+++ Y + GN+ +AR +FD M +R ++W ++ GY QN Q EA LF EM
Sbjct: 136 NTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGID 195
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P+ V+ L+S T S R+ H ++I + N+++D Y K L A +
Sbjct: 196 PDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQL 255
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
FNDI ER+ ++N L+ GY G R+A+ F +M E G +P TF +IL+A
Sbjct: 256 FNDI--PERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLD 313
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
I+ G++ + K + V ++D + + EA + +M P D + +L
Sbjct: 314 DIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEM--PEVDGISYNVL 371
Query: 490 LACRI-HGEIAANYLFQLEPEHTGY 513
+ C +G + + E + TG+
Sbjct: 372 VTCYAWNGRVKESLELFKELQFTGF 396
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 259/709 (36%), Positives = 393/709 (55%), Gaps = 73/709 (10%)
Query: 27 QIHSSLTTSGLINQALHLGAKIII---KYTTYGE----PNTARSLFNSIHNDKSYSFLWN 79
QIH GLI++ + G+ +++ + YG N ARS+F+ I S S WN
Sbjct: 223 QIH------GLISKTRY-GSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS--WN 273
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE-----GKVVHG 134
++I Y+ G V +L+S+M++ G+ F F S +LE G+ VH
Sbjct: 274 SIISVYSRRGDAVSAYDLFSSMQKEGLG-----FSFKPNDAFSEFSVLEEGRRKGREVHA 328
Query: 135 DIIRTGFLSDSYVQAA--LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
+IRTG L+D+ V LV+MYAK G D C VF+ M +D VSW +I+ +Q E
Sbjct: 329 HVIRTG-LNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECS 387
Query: 193 EEALILFQKTQQE---------GLLSDS-----------------------VTIVSVASA 220
E+A +F + G LSDS VT +++ SA
Sbjct: 388 EDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSA 447
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM-EKRDLIS 279
V L + +H + +D I N++++ Y +CG + + +F M E RD +S
Sbjct: 448 VSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVS 507
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WNSM++GYI N +A+ L M + + T ++SAC + + + G + H I
Sbjct: 508 WNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGI 567
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ ++ D + +A++DMY+KCG +D A F ++ P RNV SWN +I+GY HGHG KA
Sbjct: 568 RACLESDVVVGSALVDMYSKCGRIDYASRFF-ELMPL-RNVYSWNSMISGYARHGHGEKA 625
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
L+ F++M+ +G PDH+TF +LSACSH G ++EG + F M+++ + P V+H++CMVD
Sbjct: 626 LKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVD 685
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC-RIHGE------IAANYLFQLEPEHT 511
+LGRAG L E D I MP+ PN +W +L AC R +G AA L +LEP++
Sbjct: 686 LLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNA 745
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
+VL++N+YA+ KW +V K R MK +KK A S + + F D+++P
Sbjct: 746 VNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKD 805
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
+Y K+ + +++ AGY+P AL D+E E++E +L+YHSEK+AVAF ++ +
Sbjct: 806 LIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPI 864
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ KNLRVC DCHSAF +IS I R+I++RD+NRFHHFE G CSC DYW
Sbjct: 865 RIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 209/488 (42%), Gaps = 60/488 (12%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
+T P LF ++ ++ L + + + HC TL S+S
Sbjct: 52 FTASPFPPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTL-----------FSSSE 100
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TF ++ + E + +H I+ GF+ + ++ L+++Y + G K+FDEM
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV---GQLGDVL 228
S R+LV+W +I+ Y Q KP+EA F+ + G + + S A G G L
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 220
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSMLTGY 287
Q +HG + D+ + N +++MY C + AR VFD + R+ ISWNS+++ Y
Sbjct: 221 GVQ-IHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVY 279
Query: 288 IQNGQASEALLLFDEMQNSDC----KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ G A A LF MQ KPN + V R+ GR+ H ++I + +
Sbjct: 280 SRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLE----EGRRKGREVHAHVIRTGL 335
Query: 344 KID-ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ + N +++MYAK G + A ++F + E++ SWN LI+G + A E
Sbjct: 336 NDNKVAIGNGLVNMYAKSGAIADACSVFELM--VEKDSVSWNSLISGLDQNECSEDAAEM 393
Query: 403 FS--------------------------------QMLEEGVKPDHITFTSILSACSHAGL 430
FS QM+ G +TF +ILSA S L
Sbjct: 394 FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL 453
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+ + A + K + + ++ G+ G + E + +M ++ W + ++
Sbjct: 454 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNS-MI 512
Query: 491 ACRIHGEI 498
+ IH E+
Sbjct: 513 SGYIHNEL 520
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 343/573 (59%), Gaps = 11/573 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
++ A ++ S I + +H +I++ + ++ LV Y + G T D ++FDE+ +D
Sbjct: 44 LITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKD 103
Query: 176 LVSWTVMITAYEQAEKPEEAL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
LVSW +I+ + + L +LF+ + GL + VT++ V SA +G++ + +H
Sbjct: 104 LVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIH 163
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
G A+ + L ++ + NS++ +Y +CG +E A +F+ M + L+SWNSM+ ++ G A
Sbjct: 164 GIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAE 223
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
+ + F M+ + + T + L+ AC LG R+L HGYI+N + + + A++
Sbjct: 224 KGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALL 283
Query: 355 DMYAKCGDLDTAENMFND-IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
D+YAK G L + +F I+P + +W +++ Y MHG GR+A+E F M+ EGV P
Sbjct: 284 DLYAKLGTLSDSCKVFGGMINP---DAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVP 340
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDM 472
DH+TFT +LSACSH+GL++EG+ F M + V+ V+HY+CMVD+LGR+G L +A+ +
Sbjct: 341 DHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKL 400
Query: 473 IKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKW 527
IK MP+ PN VWGAL+ ACR+ G I A LF L+P + ++ +SN+Y+A+ +W
Sbjct: 401 IKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQW 460
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
R+ K+R MK + L + S IE+G I F D+ +P +++Y K+E + + +
Sbjct: 461 RDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREV 520
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
G+ LHDV++E +E ++N HSEKLA+AFG++ + +TKN+R+C DCH
Sbjct: 521 GFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFA 580
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ IS I +R II+RD RFHHF G CSC DYW
Sbjct: 581 KLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 202/415 (48%), Gaps = 12/415 (2%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+ +C+ ++ R +H + S N +G +++ Y G A LF+ + + S
Sbjct: 48 ISTCSSISYCRALHCRVIKSVNYNHGF-IGDQLVSSYVELGCTKDALELFDELPDKDLVS 106
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
WN++I ++ L L MR G+ N T V+ ACA + GK +HG
Sbjct: 107 --WNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHG 164
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+++G L + V +L+++Y KCG + C +F+ MSV+ LVSW M+ + E+
Sbjct: 165 IAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEK 224
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+ F ++ G+ SD T+VS+ A LG A+AVHGY + +L I +++
Sbjct: 225 GIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLD 284
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
+YA+ G + + VF M D ++W +ML+ Y +G+ EA+ F+ M P+ VT
Sbjct: 285 LYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVT 344
Query: 315 ALILVSACTYLGSRQLGRKFHGYIIN-SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
L+SAC++ G + G+ + + +++ + ++D+ + G L+ A + +
Sbjct: 345 FTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSM 404
Query: 374 HPSERNVSSWNVLIAGYGMHGH---GRKALE-FFSQMLEEGVKPDHITFTSILSA 424
P E N W LI + G+ G++ E FS L+ ++IT +++ SA
Sbjct: 405 -PMEPNSGVWGALIGACRVRGNIELGKEVAERLFS--LDPSDSRNYITLSNMYSA 456
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 142/294 (48%), Gaps = 10/294 (3%)
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+ L+S +T +S S++ +A+H I + I + +V+ Y G +
Sbjct: 38 DSLVSALITAISTCSSISY------CRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKD 91
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL-LLFDEMQNSDCKPNPVTALILVSACT 323
A +FD + +DL+SWNS+++G+ + L LLF KPN VT + +VSAC
Sbjct: 92 ALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACA 151
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+G +G+ HG + S M ++ + N+++++Y KCG L+ A +F + S +++ SW
Sbjct: 152 GVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGM--SVQSLVSW 209
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N ++A + G K + +F M G+ D T S+L AC + G+ +
Sbjct: 210 NSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILN 269
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ + ++D+ + G L ++ + M + P+ W A+L + +HG
Sbjct: 270 GGLDGNLAIATALLDLYAKLGTLSDSCKVFGGM-INPDAVAWTAMLSSYAMHGR 322
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/641 (34%), Positives = 360/641 (56%), Gaps = 51/641 (7%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN MI A + +G E L L M R G+ +S T+ L ACA + GK +H +I
Sbjct: 238 WNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI 297
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R+ D YV +AL+++YAKCG + +VF+ + R+ VSWTV+I Q E +++
Sbjct: 298 RSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVE 357
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF + + E + D + ++ S D+ + +H + + + + NS++++YA
Sbjct: 358 LFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYA 417
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-------------- 303
+CG+++ A VF M +RD++SW SM+T Y Q G +A FD M
Sbjct: 418 KCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGA 477
Query: 304 ------------------QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
D P+ VT + L C +G+ +LG + G+ + + + +
Sbjct: 478 YIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL 537
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ ++ NA + MY+KCG + A+ +F+ ++ ++V SWN +I GY HG G++A + F
Sbjct: 538 NVSVANAAITMYSKCGRISEAQKLFDLLNG--KDVVSWNAMITGYSQHGMGKQAAKTFDD 595
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAG 464
ML +G KPD+I++ ++LS CSH+GL+ EG+ F MT++ + P ++H++CMVD+LGRAG
Sbjct: 596 MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAG 655
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSN 519
L EA D+I +MP+ P VWGALL AC+IHG E+AA ++F+L+ +G ++L++
Sbjct: 656 HLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAK 715
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+ + K + ++R+ M++KG+KK +S +E + F D +P + K++
Sbjct: 716 IYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDE 775
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ +I GY+ + R + +HSEKLAVAFGIM+L + + KNLR+
Sbjct: 776 LMEKIAHLGYVR---------TESPRSEI--HHSEKLAVAFGIMSLPAWMPIHIMKNLRI 824
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+ + IS + R+ ++RD RFHHF+ G+CSC DYW
Sbjct: 825 CGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 211/438 (48%), Gaps = 41/438 (9%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNS 110
Y G + A LF+ + S WNT++ Y ++ LE + +M RSG S N+
Sbjct: 81 YAKQGSLSDAEELFDRMPRRDVAS--WNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNA 138
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF-- 168
+TF V+K+C + + G + F D V+ ALVDM+ +CG D ++F
Sbjct: 139 FTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQ 198
Query: 169 -----------------------------DEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
++M+ RD+VSW +MI A Q+ + EAL L
Sbjct: 199 IERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLV 258
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
+ ++G+ DS T S +A +L + + +H I + D + ++++ +YA+C
Sbjct: 259 VEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC 318
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G+ ++A+ VF+ ++ R+ +SW ++ G +Q S+++ LF++M+ + L+
Sbjct: 319 GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLI 378
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
S C LGR+ H + S + N+++ +YAKCGDL AE +F+ + SER+
Sbjct: 379 SGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSM--SERD 436
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
+ SW +I Y G+ KA EFF M + IT+ ++L A G ++G K ++
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYS 492
Query: 440 DM-TKLSVKPEVKHYACM 456
M ++ V P+ Y +
Sbjct: 493 AMLSQKDVTPDWVTYVTL 510
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 159/373 (42%), Gaps = 66/373 (17%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV--------- 167
L++C S + + +HG ++ G S ++Q L+ Y CG D ++
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 168 -----------------------FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
FD M RD+ SW +++ Y QA + + L F +
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 205 EG-LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
G L ++ T V + G LG A + G F D ++ ++V M+ RCG V+
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 264 KARLVFDMMEK-------------------------------RDLISWNSMLTGYIQNGQ 292
A +F +E+ RD++SWN M+ Q+G+
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
EAL L EM + + T ++AC L S G++ H +I S +ID + +A
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++++YAKCG A+ +FN + +RN SW VLI G + K++E F+QM E +
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQ--DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 413 PDHITFTSILSAC 425
D +++S C
Sbjct: 369 IDQFALATLISGC 381
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 51/306 (16%)
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE------------DLCIQNSIVAM 255
L + V +ASAV L+ +H Y C A + ++ N ++
Sbjct: 26 LHGRLVTVGLASAV-----FLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNG 80
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS-DCKPNPVT 314
YA+ G++ A +FD M +RD+ SWN++++GY Q + + L F M S D PN T
Sbjct: 81 YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFT 140
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
++ +C LG R+L + G + D + A++DM+ +CG +D A +F+ I
Sbjct: 141 FCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE 200
Query: 375 P-----------------------------SERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ER+V SWN++IA G R+AL +
Sbjct: 201 RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVE 260
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY--ACMVDMLGRA 463
M +GV+ D T+TS L+AC+ + G++ A + + P++ Y + ++++ +
Sbjct: 261 MHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR--SLPQIDPYVASALIELYAKC 318
Query: 464 GCLYEA 469
G EA
Sbjct: 319 GSFKEA 324
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/675 (35%), Positives = 381/675 (56%), Gaps = 34/675 (5%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
N L + R + L + + LHL K+I YT A LF+ + S WN
Sbjct: 21 NHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVS--WN 78
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
+MI+ + G+ L+ M + S + LK G+V ++ +
Sbjct: 79 SMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKF---------GRV---ELAQR 126
Query: 140 GFL----SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
FL D A+V Y + G+ ++G ++F+EM VRD++SWT MI + K EEA
Sbjct: 127 LFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEA 186
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI-CNAFLEDLCIQNSIVA 254
L +F+K + G+ T V SA + VHG+ + F + I S++
Sbjct: 187 LFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEF-ISVSLIT 245
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
YA C +E A +F+ ++++ W ++LT Y+ N + +AL +F +M PN T
Sbjct: 246 FYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQST 305
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
I + AC L + G++ H I ++ D + N+++ MY +CG++++A +F +I
Sbjct: 306 FSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNI- 364
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
+E+++ SWN +I G HG G AL FF+QM+ GV P+ ITFT +LSACS +G++ +G
Sbjct: 365 -NEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKG 423
Query: 435 RKCFADMTKLS---VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
R F +++ ++P+ HYACMVD+LGR G L EA ++++ MP+ N +W ALL A
Sbjct: 424 RCFFEYISRYKSNVLRPQ--HYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSA 481
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL-KKP 545
CR+H E AA ++ LEP + +VL+SNIYA++ +W +V ++R MK GL K+P
Sbjct: 482 CRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQP 541
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
+ V+ GK + F +ADR +P + +Y+K++ + ++K GY+PD ALHDVEDE +
Sbjct: 542 GSSWVVLRGKKHE-FLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQK 600
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E ML++HSE+LA+AFG+++ + + V KNLRVC DCHS + +S I RKI+VRD+ R
Sbjct: 601 EEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGR 660
Query: 666 FHHFEGGTCSCNDYW 680
FHHF+ G CSC+DYW
Sbjct: 661 FHHFKNGICSCSDYW 675
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/670 (35%), Positives = 367/670 (54%), Gaps = 68/670 (10%)
Query: 26 RQIHSSLTTSGLINQALHLGA--------KIIIKYTTYGEPNTARSLFNSIHNDKSYSFL 77
R+IH L + + LH+ K I + + +AR++F + + +
Sbjct: 51 RRIH--LVSPNNVTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVT-- 106
Query: 78 WNTMIRAYAN-NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WNTM+ Y G E EL+ I E V +I
Sbjct: 107 WNTMLSGYTKVAGKVKEAHELFDK-------------------------IPEPDSVSYNI 141
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ +L V+AAL F++M V+D+ SW +I+ + Q + ++A
Sbjct: 142 MLVCYLRSYGVEAALA--------------FFNKMPVKDIASWNTLISGFAQNGQMQKAF 187
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF ++ +S S I S + GD+ A+ ++ N ++ + ++ +++ Y
Sbjct: 188 DLFSVMPEKNGVSWSAMI----SGYVEHGDLEAAEELYK----NVGMKSVVVETAMLTGY 239
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+ G VE A +F M ++L++WNSM+ GY++N +A + L +F M S +PNP++
Sbjct: 240 MKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLS 299
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ C+ L + LGR+ H + S + D T +++ MY KCGDLD+A +F ++
Sbjct: 300 SVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEM--P 357
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
++V SWN +I+GY HG GRKAL F +M +KPD ITF +++ AC+HAG +D G +
Sbjct: 358 RKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQ 417
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F M K ++ + HY C++D+LGRAG L EA +IK+MP P+ +++G LL ACRIH
Sbjct: 418 YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIH 477
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
E AA L L+P +V ++NIYAA+NKW +V K+R+ MK + K +S
Sbjct: 478 KNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSW 537
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
IE F ++DR++P ++KK+ + ++K+AGY+PDL ALHDVE+E +E +L
Sbjct: 538 IEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLL 597
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
+HSEKLA+AFG+M P ++V KNLRVC DCH A +FIS I +R+IIVRD RFHHF
Sbjct: 598 WHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFR 657
Query: 671 GGTCSCNDYW 680
G CSC DYW
Sbjct: 658 NGFCSCGDYW 667
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/572 (36%), Positives = 338/572 (59%), Gaps = 7/572 (1%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
++L+ CA + G+ H IIR G D L++MY+KC D K F+EM V+
Sbjct: 48 YLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVK 107
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
LVSW +I A Q + EAL L + Q+EG + TI SV +L+ +H
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLH 167
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
++I A + + +++ +YA+C +++ A +F+ M +++ ++W+SM+ GY+QNG
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHE 227
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EALL+F Q +P VSAC L + G++ H S + + ++++
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLI 287
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
DMYAKCG + A +F + R++ WN +I+G+ H +A+ F +M + G PD
Sbjct: 288 DMYAKCGCIREAYLVFQGV-LEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPD 346
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+T+ +L+ACSH GL +EG+K F M + ++ P V HY+CM+D+LGRAG +++A+D+I
Sbjct: 347 DVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLI 406
Query: 474 KQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
++MP S+WG+LL +C+I+G EIAA YLF++EP + G +L++NIYAA+ KW
Sbjct: 407 ERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWD 466
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
EV + R+ ++ ++K S IE I F +R +P ++Y K++++ VE+K
Sbjct: 467 EVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLN 526
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y D S LHDVE+ ++ +L +HSEKLA+ FG+M L + +++ KNLR+C DCH+ +
Sbjct: 527 YKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMK 586
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+S R+IIVRD NRFHHF+ G CSC ++W
Sbjct: 587 LVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 209/416 (50%), Gaps = 10/416 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R H+ + GL L +I Y+ ++AR FN + S WNT+I A
Sbjct: 63 RACHAQIIRIGLEMDIL-TSNMLINMYSKCSLVDSARKKFNEMPVKSLVS--WNTVIGAL 119
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
N E L+L M+R G N +T VL CA ILE +H I+ S+
Sbjct: 120 TQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNC 179
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V AL+ +YAKC D ++F+ M ++ V+W+ M+ Y Q EEAL++F+ Q
Sbjct: 180 FVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLM 239
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G D I S SA L +++ + VH + + F ++ + +S++ MYA+CG + +A
Sbjct: 240 GFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREA 299
Query: 266 RLVFD-MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
LVF ++E R ++ WN+M++G+ ++ +A EA++LF++MQ P+ VT + +++AC++
Sbjct: 300 YLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSH 359
Query: 325 LGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+G + G+K+ ++ N+ + ++D+ + G + A ++ + P S W
Sbjct: 360 MGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERM-PFNATSSMW 418
Query: 384 NVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
L+A ++G+ A ++ +M E +HI +I +A + RK
Sbjct: 419 GSLLASCKIYGNIEFAEIAAKYLFEM-EPNNAGNHILLANIYAANKKWDEVARARK 473
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/671 (33%), Positives = 377/671 (56%), Gaps = 16/671 (2%)
Query: 19 CNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLW 78
C+ L R IH+ + + + L ++ Y+ N+A+ + + H + W
Sbjct: 21 CSILG--RTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVT--W 76
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
++I +N + L ++ MRR + N +TFP V KA A + + GK +HG ++
Sbjct: 77 TSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALK 136
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G + D +V + DMY K G D C +FDEM R+L +W I+ Q + +A++
Sbjct: 137 GGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVA 196
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F++ +S+T + +A + + + +H + + + ED+ + N ++ Y +
Sbjct: 197 FKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGK 256
Query: 259 CGNVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
CG++ A +VF+ + +++++SW SML +QN + A ++F + + + +P
Sbjct: 257 CGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARK-EVEPTDFMISS 315
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++SAC LG +LGR H + + ++ + + +A++DMY KCG ++ AE +F+++ E
Sbjct: 316 VLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSEL--PE 373
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQML--EEGVKPDHITFTSILSACSHAGLIDEGR 435
RN+ +WN +I GY G AL F +M G++P ++T SILS CS G ++ G
Sbjct: 374 RNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGI 433
Query: 436 KCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F M ++P +H+AC+VD+LGR+G + A++ I+ M + P SVWGALL ACR+
Sbjct: 434 QIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRM 493
Query: 495 HGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
HG+ IAA LF+L+ +G V++SN+ A++ +W E +R++MK+ G+KK +S
Sbjct: 494 HGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYS 553
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
I I F D + E+ + + +K AGY+PD + +L D+EDE++ +
Sbjct: 554 WIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEV 613
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
YHSEK+A+AFG++ L +++TKNLR+C DCHSA +FIS I R+IIVRD +RFH F
Sbjct: 614 WYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRF 673
Query: 670 EGGTCSCNDYW 680
+ G CSC DYW
Sbjct: 674 KDGCCSCKDYW 684
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 190/384 (49%), Gaps = 4/384 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
+L++ S + G+ +H IIRT S++ LV+MY+K + V +R
Sbjct: 12 LLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLR 71
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+V+WT +I+ + AL+ F +++ + + T V A + + + +H
Sbjct: 72 TVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIH 131
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
G A+ + D+ + S MY + G A +FD M +R+L +WN+ ++ +Q+ ++
Sbjct: 132 GLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSL 191
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
+A++ F E +PN +T ++AC + LGR+ H +I+ K D ++ N ++
Sbjct: 192 DAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLI 251
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
D Y KCGD+ +AE +FN I + +NV SW ++A + +A F Q +E V+P
Sbjct: 252 DFYGKCGDIVSAEMVFNRI-GNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPT 309
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+S+LSAC+ G ++ GR A K V+ + + +VDM G+ G + A +
Sbjct: 310 DFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFS 369
Query: 475 QMPLPPNDSVWGALLLACRIHGEI 498
++P N W A++ G+I
Sbjct: 370 ELP-ERNLVTWNAMIGGYAHQGDI 392
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/661 (35%), Positives = 362/661 (54%), Gaps = 13/661 (1%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
IH GL+++ + A +I Y+ G + A LF I N S WN+MI AY+
Sbjct: 335 IHGMAVKLGLVHELMVCNA-LIDMYSKCGCLSEAAILFRKIENKSVVS--WNSMIGAYSR 391
Query: 88 NGHCVETLELYSTM--RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
G ET +L M + N T +L AC S +L + +HG +R F
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ A + YAKCG VF M+ + + SW +I + Q P +AL + + +
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+L D +IVS+ A G+LG + + +HG+ + N + + S++++Y C
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R F+ M ++ + WN+ML+GY QN +EAL LF +M + +P+ + ++ AC+ L
Sbjct: 572 RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ LG++ H + + +++ D + ++MDMYAK G L ++ +FN ++ E V+SWNV
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKE--VASWNV 689
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I G+G+HG G KA+E F M +PD TF +L AC HAGL+ EG A M L
Sbjct: 690 MITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLY 749
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
++PE++HYAC++DMLGRAG L EA + I +MP P+ +W +LL + + GE
Sbjct: 750 KLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKF 809
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A L LE ++L+SN+YA + KW V +R+ MK+ L+K S IE +
Sbjct: 810 AEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYS 869
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F + NP E+ K + +I GY PD SC LH++E+ ++ +L HSEK+A+
Sbjct: 870 FIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAIC 929
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG +N ++++KNLR+C DCH+A ++IS +R+I++RD RFHHF+ G CSC DY
Sbjct: 930 FGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDY 989
Query: 680 W 680
W
Sbjct: 990 W 990
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 215/416 (51%), Gaps = 9/416 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++ L S + L ++I Y+ G P +R +F+ + N F WN ++ Y
Sbjct: 127 RKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNL--FQWNALVSGY 184
Query: 86 ANNGHCVETLELY-STMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
N E + + + + +++TFP ++KAC I GK VHG ++ G + D
Sbjct: 185 VRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMD 244
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V A++ +Y KCG D+ ++FD+M ++L+SW +I + + EA F+ +
Sbjct: 245 LFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304
Query: 205 --EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+GL+ D T+V++ G+V +HG A+ + +L + N+++ MY++CG +
Sbjct: 305 SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCL 364
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE--MQNSDCKPNPVTALILVS 320
+A ++F +E + ++SWNSM+ Y + G E L + M+ + N VT L L+
Sbjct: 365 SEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLP 424
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
AC R HGY + + + + NA + YAKCG L AE++F ++ ++V
Sbjct: 425 ACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT--KSV 482
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
SSWN +I G+ +G KAL+F+ +M G+ PD + S+L AC GL+ G++
Sbjct: 483 SSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 219/437 (50%), Gaps = 20/437 (4%)
Query: 22 LASLRQIHS-----SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
L SLR +H S LIN A I Y G A +F + N KS S
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAF------IAAYAKCGSLVFAEHVFFGM-NTKSVSS 484
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN +I +A NG ++ L+ Y M R GI + ++ +L AC L+ GK +HG +
Sbjct: 485 -WNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFV 543
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+R G +S+V +L+ +Y C + G F+ M ++ V W M++ Y Q E P EAL
Sbjct: 544 LRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEAL 603
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF++ +GL D + I S+ A QL + + VH +A+ N+ +ED + S++ MY
Sbjct: 604 SLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMY 663
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+ G + ++ +F+ + +++ SWN M+TG+ +GQ ++A+ LF++M+ SD +P+ T L
Sbjct: 664 AKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFL 723
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIH 374
++ AC + G G + + + K++ L + V+DM + G L+ A N N++
Sbjct: 724 GVLQACCHAGLVSEGLNYLAQ-MQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEM- 781
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHAGLIDE 433
P E + W+ L++ + +F ++L E K D S L A AG D
Sbjct: 782 PEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYAT--AGKWDV 839
Query: 434 GRKCFADMTKLSVKPEV 450
R M LS++ +V
Sbjct: 840 VRMVRQKMKDLSLQKDV 856
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 139/259 (53%), Gaps = 10/259 (3%)
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
+ + F D + ++ MY+ CG ++RLVFD + ++L WN++++GY++N EA+
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAI 194
Query: 298 LLFDEMQN-SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
F E+ + ++ +P+ T L+ ACT LG+ HG + + +D + NA++ +
Sbjct: 195 HTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIAL 254
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE--EGVKPD 414
Y KCG LD A +F+ + E+N+ SWN LI G+ +G +A F +LE +G+ PD
Sbjct: 255 YGKCGFLDEAVELFDKM--PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPD 312
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
T ++L CS G +D G KL + E+ ++DM + GCL EA + +
Sbjct: 313 VATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFR 372
Query: 475 QMPLPPNDSV--WGALLLA 491
++ N SV W +++ A
Sbjct: 373 KI---ENKSVVSWNSMIGA 388
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/682 (34%), Positives = 377/682 (55%), Gaps = 54/682 (7%)
Query: 9 EGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
E + L+ + N LRQIH L + + + + + I ++ + A S+F
Sbjct: 42 ETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSS-RVVTQFISSCSSLNSVDYAISIFQRF 100
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
SY L+N +IR A N ++ + M + IS + TFPFVLK+ A+ S
Sbjct: 101 ELKNSY--LFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGV 158
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRD--LVSWTVMIT 184
G+ +H I++ G DS+V+ +LVDMY K + KVFDE SV++ ++ W V+I
Sbjct: 159 GRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIH 218
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Y ++GD++KA + + +
Sbjct: 219 GY-----------------------------------CRMGDLVKATELFD----SMPKK 239
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D NS++ + + G++ +A+ +F M +++++SW +M+ G+ QNG +AL F M
Sbjct: 240 DTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCML 299
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+PN T + +SAC +G+ G + H Y+ + K++ + A++DMYAKCG+++
Sbjct: 300 EEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIE 359
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
AE +F++ E+ + W+V+I G+ +HGH RKAL++F M G KPD + F ++L+A
Sbjct: 360 HAEKVFHE--TKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNA 417
Query: 425 CSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CSH+G ++EG K F +M + ++P +KHY +VDMLGRAG L EA I+ MP+ P+
Sbjct: 418 CSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFV 477
Query: 484 VWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
VWGAL ACR H E+A+ L QLEP+H G +V +SN YA+ +W + ++R M+
Sbjct: 478 VWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMR 537
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
+ G K +S IE + F D + E+Y K++ ++ + GY ++ C LH
Sbjct: 538 DHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLH 597
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
++E+E++E L YHSEKLA+AFGI++ P V++ KNLRVC DCHS ++ S + +R+I
Sbjct: 598 NIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREI 657
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
I+RD RFHHF G CSC DYW
Sbjct: 658 ILRDMKRFHHFNDGVCSCGDYW 679
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/661 (35%), Positives = 362/661 (54%), Gaps = 13/661 (1%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
IH GL+++ + A +I Y+ G + A LF I N S WN+MI AY+
Sbjct: 335 IHGMAVKLGLVHELMVCNA-LIDMYSKCGCLSEAAILFRKIENKSVVS--WNSMIGAYSR 391
Query: 88 NGHCVETLELYSTM--RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
G ET +L M + N T +L AC S +L + +HG +R F
Sbjct: 392 EGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKE 451
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ A + YAKCG VF M+ + + SW +I + Q P +AL + + +
Sbjct: 452 LINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRL 511
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+L D +IVS+ A G+LG + + +HG+ + N + + S++++Y C
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R F+ M ++ + WN+ML+GY QN +EAL LF +M + +P+ + ++ AC+ L
Sbjct: 572 RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ LG++ H + + +++ D + ++MDMYAK G L ++ +FN ++ E V+SWNV
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKE--VASWNV 689
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I G+G+HG G KA+E F M +PD TF +L AC HAGL+ EG A M L
Sbjct: 690 MITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLY 749
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
++PE++HYAC++DMLGRAG L EA + I +MP P+ +W +LL + + GE
Sbjct: 750 KLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKF 809
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A L LE ++L+SN+YA + KW V +R+ MK+ L+K S IE +
Sbjct: 810 AEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYS 869
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F + NP E+ K + +I GY PD SC LH++E+ ++ +L HSEK+A+
Sbjct: 870 FIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAIC 929
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG +N ++++KNLR+C DCH+A ++IS +R+I++RD RFHHF+ G CSC DY
Sbjct: 930 FGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDY 989
Query: 680 W 680
W
Sbjct: 990 W 990
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 215/416 (51%), Gaps = 9/416 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++ L S + L ++I Y+ G P +R +F+ + N F WN ++ Y
Sbjct: 127 RKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNL--FQWNALVSGY 184
Query: 86 ANNGHCVETLELY-STMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
N E + + + + +++TFP ++KAC I GK VHG ++ G + D
Sbjct: 185 VRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMD 244
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V A++ +Y KCG D+ ++FD+M ++L+SW +I + + EA F+ +
Sbjct: 245 LFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304
Query: 205 --EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+GL+ D T+V++ G+V +HG A+ + +L + N+++ MY++CG +
Sbjct: 305 SGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCL 364
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE--MQNSDCKPNPVTALILVS 320
+A ++F +E + ++SWNSM+ Y + G E L + M+ + N VT L L+
Sbjct: 365 SEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLP 424
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
AC R HGY + + + + NA + YAKCG L AE++F ++ ++V
Sbjct: 425 ACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNT--KSV 482
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
SSWN +I G+ +G KAL+F+ +M G+ PD + S+L AC GL+ G++
Sbjct: 483 SSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKE 538
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 219/437 (50%), Gaps = 20/437 (4%)
Query: 22 LASLRQIHS-----SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
L SLR +H S LIN A I Y G A +F + N KS S
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAF------IAAYAKCGSLVFAEHVFFGM-NTKSVSS 484
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN +I +A NG ++ L+ Y M R GI + ++ +L AC L+ GK +HG +
Sbjct: 485 -WNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFV 543
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+R G +S+V +L+ +Y C + G F+ M ++ V W M++ Y Q E P EAL
Sbjct: 544 LRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEAL 603
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF++ +GL D + I S+ A QL + + VH +A+ N+ +ED + S++ MY
Sbjct: 604 SLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMY 663
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+ G + ++ +F+ + +++ SWN M+TG+ +GQ ++A+ LF++M+ SD +P+ T L
Sbjct: 664 AKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFL 723
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIH 374
++ AC + G G + + + K++ L + V+DM + G L+ A N N++
Sbjct: 724 GVLQACCHAGLVSEGLNYLAQ-MQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEM- 781
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHAGLIDE 433
P E + W+ L++ + +F ++L E K D S L A AG D
Sbjct: 782 PEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYAT--AGKWDV 839
Query: 434 GRKCFADMTKLSVKPEV 450
R M LS++ +V
Sbjct: 840 VRMVRQKMKDLSLQKDV 856
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 139/259 (53%), Gaps = 10/259 (3%)
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
+ + F D + ++ MY+ CG ++RLVFD + ++L WN++++GY++N EA+
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAI 194
Query: 298 LLFDEMQN-SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
F E+ + ++ +P+ T L+ ACT LG+ HG + + +D + NA++ +
Sbjct: 195 HTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIAL 254
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE--EGVKPD 414
Y KCG LD A +F+ + E+N+ SWN LI G+ +G +A F +LE +G+ PD
Sbjct: 255 YGKCGFLDEAVELFDKM--PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPD 312
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
T ++L CS G +D G KL + E+ ++DM + GCL EA + +
Sbjct: 313 VATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFR 372
Query: 475 QMPLPPNDSV--WGALLLA 491
++ N SV W +++ A
Sbjct: 373 KI---ENKSVVSWNSMIGA 388
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 329/576 (57%), Gaps = 8/576 (1%)
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
+T +L+ CA +L GK HG I G ++D+ L+++Y KCGQ D +VFD
Sbjct: 57 FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
MSVR ++SW MI Y + EAL LF + +EG T+ S A +++
Sbjct: 117 MSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H AI A + + + +YA+C ++ A VF+ M ++ ++W+S+ G++QN
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN 236
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G E L LF Q + T ++S C L G + H I+ + +
Sbjct: 237 GLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVA 296
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
+++D+YAKCG ++ + +F D+ E+NV WN +IA + H H +A+ F +M + G
Sbjct: 297 TSLVDVYAKCGQIEKSYEVFADM--EEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVG 354
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCF-ADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
+ P+ +T+ SILSACSH GL++EGR F ++ + +P V HY+CMVD+LGR+G EA
Sbjct: 355 IFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEA 414
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAAS 524
+ ++ +MP P S+WG+LL + RIH IAA LF+LEPE+ G VL+SN+YAAS
Sbjct: 415 WKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAAS 474
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
W V R+ +++ G KK S IE I F +R +P +VY K+E + E+
Sbjct: 475 GNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEM 534
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
+ + + C LHDV + +E +L +HSEKLA AFG+++L P + + KNLR+C DCH
Sbjct: 535 RKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCH 594
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S + +S I R++IVRD NRFHHF+ G+CSC D+W
Sbjct: 595 SFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 215/427 (50%), Gaps = 16/427 (3%)
Query: 17 KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
KSC+ LA IH L T + L I YT G+ + AR +F+++ S
Sbjct: 76 KSCHGLA----IHFGLVTDTVTCNIL------INLYTKCGQNDCARRVFDAMSVRSIIS- 124
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WNTMI Y +N VE L+L+S M R G +T L ACA+ I+E K +H
Sbjct: 125 -WNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIA 183
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
I+ S S+V A +D+YAKC D C VF+ M + V+W+ + + Q EE L
Sbjct: 184 IKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVL 243
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LFQ TQ+EG+ T+ S+ S L +++ VH + + F +L + S+V +Y
Sbjct: 244 CLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVY 303
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+CG +EK+ VF ME+++++ WN+M+ + ++ + EA++LF++MQ PN VT L
Sbjct: 304 AKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYL 363
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHP 375
++SAC++ G + GR + +++ L + M D+ + G D A + + + P
Sbjct: 364 SILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKM-P 422
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQM--LEEGVKPDHITFTSILSACSHAGLIDE 433
E S W L+ +H + R A Q+ LE +H+ +++ +A + +
Sbjct: 423 FEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVV 482
Query: 434 GRKCFAD 440
RK D
Sbjct: 483 ARKYLRD 489
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 5/309 (1%)
Query: 190 EKPEEALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+KP ++ K + E L D T+ + + +L ++ HG AI + D
Sbjct: 33 DKPNHRIVHKDKNLVRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTV 92
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
N ++ +Y +CG + AR VFD M R +ISWN+M+ GY N + EAL LF M
Sbjct: 93 TCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREG 152
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+ T + AC + ++ H I + + + A +D+YAKC + A
Sbjct: 153 TQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDAC 212
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F ++ E+ +W+ L AG+ +G + L F EG++ T +SILS C+
Sbjct: 213 WVFENM--PEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCAS 270
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
LI EG + A + K + +VD+ + G + +++++ M N +W A
Sbjct: 271 LALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADME-EKNVVLWNA 329
Query: 488 LLLACRIHG 496
++ + H
Sbjct: 330 MIASFSRHA 338
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/717 (33%), Positives = 378/717 (52%), Gaps = 96/717 (13%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
++ Y G+ ARS+F + ++N MI +++N + L+ M+ G
Sbjct: 86 MVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 108 SNSYTFPFVLKACASNSLILEGK----VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+ +T+ VL A L+++ + H +++G + V ALV +Y++C +
Sbjct: 146 PDDFTYASVLAGLA---LVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPS 202
Query: 164 ----GCKVFDEMSVRDLVSWTVMITAYEQ------------------------------- 188
KVFD++ +D SWT M+T Y +
Sbjct: 203 LLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYV 262
Query: 189 -AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+EAL + ++ G+ D T SV A + + VH Y + ED
Sbjct: 263 NCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR---EDFS 319
Query: 248 IQ--NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
NS+V +Y +CG +AR +F+ M +DL+SWN++L+GY+ +G EA L+F EM+
Sbjct: 320 FHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK- 378
Query: 306 SDCKPNPVTALILVS-----------------------------------ACTYLGSRQL 330
+ N ++ +I++S +C LG+
Sbjct: 379 ---EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G++FH ++ + NA++ MYAKCG ++ A+ +F + P +VS WN LIA
Sbjct: 436 GQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTM-PCLDSVS-WNALIAAL 493
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPE 449
G HGHG +A++ + +ML++G++PD ITF ++L+ACSHAGL+D+GRK F M T + P
Sbjct: 494 GQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPG 553
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-----IAANYLF 504
HYA ++D+L R+G EA +I+ +P P +W ALL CR+HG IAA+ LF
Sbjct: 554 ADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF 613
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
L PEH G ++L+SN+YAA+ +W EV ++R+ M+++G+KK A S IE + F D
Sbjct: 614 GLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD 673
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE-DEDREHMLNYHSEKLAVAFGIM 623
+P + VYK ++ + E++ GY+PD S LHDVE D +E ML HSEK+AVAFG+M
Sbjct: 674 TSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLM 733
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
L P +++ KNLR C DCH+ FRF+S + +R II+RD RFHHF G CSC ++W
Sbjct: 734 KLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 191/469 (40%), Gaps = 105/469 (22%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM----------------- 171
+ VHG+II GF +++ L+D+Y K + D ++FDE+
Sbjct: 33 ARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 172 ----------------SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
S+RD V + MIT + A+ LF K + EG D T
Sbjct: 93 SGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYA 152
Query: 216 SVASAVGQLGDVLKAQAV--HGYAICNAFLEDLCIQNSIVAMYARCGN----VEKARLVF 269
SV + + + D K Q V H A+ + + N++V++Y+RC + + AR VF
Sbjct: 153 SVLAGLALVVDDEK-QCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVF 211
Query: 270 DMMEKRDLISWNSMLTGYIQN--------------------------------GQASEAL 297
D + ++D SW +M+TGY++N G EAL
Sbjct: 212 DDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEAL 271
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
+ M +S + + T ++ AC QLG++ H Y++ N+++ +Y
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLY 330
Query: 358 AKCGDLDTAENMFNDIHP-----------------------------SERNVSSWNVLIA 388
KCG + A +F + E+N+ SW ++I+
Sbjct: 331 YKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
G +G G + L+ FS M EG +P F+ + +C+ G G++ A + K+
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDS 450
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
+ ++ M + G + EA + + MP DSV W AL+ A HG
Sbjct: 451 SLSAGNALITMYAKCGVVEEAQQVFRTMPCL--DSVSWNALIAALGQHG 497
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 9 EGF------YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
EGF + +KSC L + +Q H+ L G + +L G +I Y G
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGF-DSSLSAGNALITMYAKCGVVE 469
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
A+ +F ++ S S WN +I A +GH VE +++Y M + GI + TF VL A
Sbjct: 470 EAQQVFRTMPCLDSVS--WNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTA 527
Query: 120 CASNSLILEGKVVHGD---IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
C+ L+ +G+ + R +D Y A L+D+ + G+ + + + + +
Sbjct: 528 CSHAGLVDQGRKYFNSMETVYRIPPGADHY--ARLIDLLCRSGKFSEAESIIESLPFKPT 585
Query: 177 VS-WTVMITA 185
W +++
Sbjct: 586 AEIWEALLSG 595
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 33/142 (23%)
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP----------- 375
S QL R HG II + A + N ++D+Y K +LD A +F++I
Sbjct: 29 SLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVS 88
Query: 376 --------------------SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
S R+ +N +I G+ + G A+ F +M EG KPD
Sbjct: 89 GYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDD 148
Query: 416 ITFTSILSACSHAGLIDEGRKC 437
T+ S+L+ A ++D+ ++C
Sbjct: 149 FTYASVLAGL--ALVVDDEKQC 168
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/614 (35%), Positives = 363/614 (59%), Gaps = 18/614 (2%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N +I++ G+ + L++ S + +T+ ++ +C + + +G +H +I
Sbjct: 51 NPLIQSLCKQGNLNQALQVLS----QEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G D ++ L++MY++ D+ KVFD+ R + W + A A E L L
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166
Query: 199 FQKTQQEGLLSDSVTIVSVASAV----GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+++ + G+ SD T V A + +L + +HG+ + + F + I +++
Sbjct: 167 YRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLD 226
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNP 312
MYAR G V A VFD M ++++SW++M+ Y +NG+ EAL LF +M +N D PN
Sbjct: 227 MYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT + ++ AC L + + G+ HGYI+ + + +A++ +YA+CG+L+ +F
Sbjct: 287 VTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFER 346
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ +R+V SWN LI+ YG+HG GRKA++ F +M+++G+ P I+F S+L ACSHAGL++
Sbjct: 347 M--EKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVE 404
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG+ F M + + P V+HYACMVD+LGRA L EA +I M + P VWG+LL +
Sbjct: 405 EGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGS 464
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIH E A + LF+LEP + G +VL+++IYA + W EV +++ ++ +GL+K
Sbjct: 465 CRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVP 524
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S IE + I F + D NP ++++ + +++E+K GY+PD L+D++ E++E
Sbjct: 525 GRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKE 584
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
++ HSEKLA+AFG++N +++TKNLR+C DCHS +FIS R+I+VRD NRF
Sbjct: 585 RIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRF 644
Query: 667 HHFEGGTCSCNDYW 680
H F+ G CSC DYW
Sbjct: 645 HLFQDGVCSCGDYW 658
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 222/411 (54%), Gaps = 14/411 (3%)
Query: 8 TEGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
T+ Y+ L+ SC SL Q +H L G +Q L K+I Y+ + AR +
Sbjct: 77 TQHTYELLILSCTRQNSLPQGIDLHRHLIHDG-SDQDPFLATKLINMYSELDSIDNARKV 135
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN- 123
F+ K ++WN + RA G+ E L+LY M R G+ S+ +T+ +VLKAC ++
Sbjct: 136 FDKTR--KRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASE 193
Query: 124 ---SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
SL+L G+ +HG I+R GF ++ L+DMYA+ G + +VFD+M V+++VSW+
Sbjct: 194 AFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWS 253
Query: 181 VMITAYEQAEKPEEALILFQKT--QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
MI Y + KP EAL LF+K + + LL +SVT+VSV A L + + + +HGY +
Sbjct: 254 AMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYIL 313
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
L + +++V +YARCGN+E VF+ MEKRD++SWNS+++ Y +G +A+
Sbjct: 314 RRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQ 373
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMY 357
+F EM + P+P++ + ++ AC++ G + G+ ++ + + A M D+
Sbjct: 374 IFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLL 433
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ LD A + +D+ E W L+ +H + A S++ E
Sbjct: 434 GRANRLDEAAKIIDDMR-IEPGPKVWGSLLGSCRIHCNVELAERATSRLFE 483
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/672 (33%), Positives = 367/672 (54%), Gaps = 15/672 (2%)
Query: 18 SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFL 77
S ++L + +H GL + L ++ Y+ G A +F + S
Sbjct: 273 SVDYLKWGKGVHGLAVKYGL-ESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLIS-- 329
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN+M+ Y +G C+ L++++ M N TF L AC GK++HG ++
Sbjct: 330 WNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVV 389
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
G + + L+ Y KC + + KVF M D V+W +I + + EA+
Sbjct: 390 VLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVA 449
Query: 198 LFQKTQQEGLLS--DSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVA 254
F K +EG S D +TIV++ + D++K +H + + F D +Q+S++
Sbjct: 450 AF-KLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLIT 508
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MYA+CG++ + +FD + + WN+++ + G EAL L M+++ + +
Sbjct: 509 MYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFN 568
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+S L + G++ HG I ++D + NA MDMY KCG+LD A +
Sbjct: 569 FSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILP--Q 626
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
P++R+ SWN LI+ HG KA E F ML+ GVKP+H++F +LSACSH GL+DEG
Sbjct: 627 PTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEG 686
Query: 435 RKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
+A MT + ++P ++H CM+D+LGR+G L EA I +MP+PPND VW +LL +CR
Sbjct: 687 LAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCR 746
Query: 494 IH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
I+ G AA +L +L+P +VL SN++A +W +V +R M ++K A
Sbjct: 747 IYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAH 806
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S +++ +I F D+ +P +++ K+ + + AGY+PD S +L D ++E +EH
Sbjct: 807 SWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHN 866
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
+ HSE++A+AFG++N+ + V++ KNLRVC DCHS F+F+S + RKI++RD RFHH
Sbjct: 867 MWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHH 926
Query: 669 FEGGTCSCNDYW 680
F G CSC+DYW
Sbjct: 927 FTNGNCSCSDYW 938
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 222/467 (47%), Gaps = 8/467 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q H GLI +G + Y +YG + A+ +FN + + S W +++ +Y+
Sbjct: 80 QFHGFAIKCGLIYDVF-VGTSFVHFYASYGIVSNAQKMFNEMPDRNVVS--WTSLMVSYS 136
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+NG E + Y MR GI N V+ +C I+ G + G ++ G +
Sbjct: 137 DNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVS 196
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
+L+ M+ CG ++ C +F+EM+ RD +SW +I+A Q EE+ F +
Sbjct: 197 AANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVH 256
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ T+ + S G + + + VHG A+ ++C+ N+++++Y+ G + A
Sbjct: 257 EEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAE 316
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
L+F M +RDLISWNSML Y+Q+G+ AL +F EM + N VT ++AC
Sbjct: 317 LIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPE 376
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
G+ HG+++ ++ + + N ++ Y KC + A+ +F + ++ +WN L
Sbjct: 377 FFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDK--VTWNAL 434
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKP-DHITFTSILSAC-SHAGLIDEGRKCFADMTKL 444
I G+ + +A+ F M E D+IT +IL +C +H LI G A
Sbjct: 435 IGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVT 494
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ + ++ M + G L+ + + Q+ + SVW A++ A
Sbjct: 495 GFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTS-SVWNAIIAA 540
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 217/439 (49%), Gaps = 6/439 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ +G N A+ +F+ + S WN M+ Y G VE + + + GI + +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEAS--WNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGF 59
Query: 112 TFPFVLKACASNSLIL-EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
++ AC +S++ EG HG I+ G + D +V + V YA G + K+F+E
Sbjct: 60 MIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M R++VSWT ++ +Y +E + +++ + EG+ + I V S+ G L D++
Sbjct: 120 MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILG 179
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ G+A+ + NS++ M+ CG++ +A +F+ M +RD ISWNS+++ QN
Sbjct: 180 HQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQN 239
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
E+ F M+ + N T IL+S C + + G+ HG + ++ + L
Sbjct: 240 TLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLC 299
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N ++ +Y+ G AE +F + ER++ SWN ++A Y G AL+ F++ML
Sbjct: 300 NTLLSVYSDAGRSKDAELIFRRM--PERDLISWNSMLACYVQDGRCLCALKVFAEMLWMK 357
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
+ +++TFTS L+AC G+ + L ++ E+ ++ G+ + EA
Sbjct: 358 KEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK 417
Query: 471 DMIKQMPLPPNDSVWGALL 489
+ ++MP + W AL+
Sbjct: 418 KVFQRMP-KLDKVTWNALI 435
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 163/343 (47%), Gaps = 5/343 (1%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY+K G+ + VFD MS R+ SW M++ Y + EA++ F+ G+
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 214 IVSVASAVGQLGDVLKAQ-AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
I S+ +A + + K HG+AI + D+ + S V YA G V A+ +F+ M
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
R+++SW S++ Y NG E + + M++ N +++S+C +L LG
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ G+ + ++ + N+++ M+ CGD++ A ++FN++ +ER+ SWN +I+
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEM--NERDTISWNSIISANAQ 238
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
+ ++ +F M + ++ T + +LS C + G+ K ++ +
Sbjct: 239 NTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
++ + AG +A + ++M P D + +LAC +
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRM--PERDLISWNSMLACYVQ 339
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 17/274 (6%)
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY++ G + A+LVFD M +R+ SWN M++GY++ G EA+L F ++ KP+
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 315 ALILVSAC--TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
LV+AC + + +++ G +FHG+ I + D + + + YA G + A+ MFN+
Sbjct: 61 IASLVTACNKSSIMAKE-GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ +RNV SW L+ Y +G ++ + + +M EG+ + ++S+C I
Sbjct: 120 M--PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDII 177
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA 491
G + K ++ +V ++ M G G + EA + +M D++ W ++
Sbjct: 178 LGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEM--NERDTISWNSI--- 232
Query: 492 CRIHGEIAANYLFQLEPEHTGYFVLMSNIYAASN 525
I+AN L E YF M ++ N
Sbjct: 233 ------ISANAQNTLHEESFRYFHWMRLVHEEIN 260
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 332/556 (59%), Gaps = 13/556 (2%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H + ++ D ++ LV Y K G +D K+FD+M +DLVSW +I+ + +
Sbjct: 61 IHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRC-- 118
Query: 192 PEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+L F + E + + VTI+S+ SA G + + +HG+ I ++ + N
Sbjct: 119 LHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGKYIHGFGIKVGGTLEVKVAN 176
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
S++ MY + G++ A +F+ + + +SWNS++ + NG A E + F++M+ +
Sbjct: 177 SLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQ 236
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ T L L+ AC +LG +L HG + + T+ A++D YAK G L + +F
Sbjct: 237 DEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVF 296
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
++ ++R +W ++AGY HG GR+A++ F M +G++PDH+TFT +LSACSH+GL
Sbjct: 297 TEVGFADR--VAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGL 354
Query: 431 IDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++EG+ F M+++ ++P V HY+CMVD+LGR G L +A+++I+ MP+ PN VWGALL
Sbjct: 355 VNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALL 414
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+HG I A +L +EP ++++SN+Y+AS W++ K+R +K +GLK+
Sbjct: 415 GACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKR 474
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
+S IEYG F DR +P +++Y K+E + +I+ AGY L DVE+E
Sbjct: 475 TPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEV 534
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E M+N HSEKLA+AFG++ + +TKNLR+C DCHS + IS I +R II+RD
Sbjct: 535 KEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPK 594
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 595 RFHHFSDGFCSCADYW 610
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 202/416 (48%), Gaps = 18/416 (4%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+ SC +++ R+IH+ + S L +G +++ Y G A LF+ + + S
Sbjct: 49 VNSCPSISNCREIHARVFKSLLYRDGF-IGDQLVTCYNKLGYAEDALKLFDDMPHKDLVS 107
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
WN++I ++ H +L + TM+ + N T ++ AC+ + GK +HG
Sbjct: 108 --WNSLISGFSRCLHM--SLTAFYTMKFEMSVKPNEVTILSMISACSGA--LDAGKYIHG 161
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
I+ G + V +L++MY K G C++F+ + + VSW +I A E
Sbjct: 162 FGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCARE 221
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+ F K ++ G+ D TI+++ A LG A+++HG C F + I +++
Sbjct: 222 GIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLD 281
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
YA+ G + + VF + D ++W +ML GY +G EA+ LF+ M N +P+ VT
Sbjct: 282 TYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVT 341
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR--NAVMDMYAKCGDLDTAENMFND 372
L+SAC++ G G+ + +++ I+ + + ++D+ +CG L+ A + +
Sbjct: 342 FTHLLSACSHSGLVNEGKSYFN-VMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQN 400
Query: 373 IHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKP-DHITFTSILSA 424
+ P E N W L+ +HG+ G++ E M E + P ++I +++ SA
Sbjct: 401 M-PMEPNAGVWGALLGACRVHGNIELGKEVAEHLINM--EPLDPRNYIMLSNMYSA 453
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 145/307 (47%), Gaps = 15/307 (4%)
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
AV + + +H + D I + +V Y + G E A +FD M +DL+S
Sbjct: 48 AVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVS 107
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
WNS+++G+ + S L F M+ KPN VT L ++SAC+ G+ G+ HG+
Sbjct: 108 WNSLISGFSRCLHMS--LTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGKYIHGFG 163
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
I ++ + N++++MY K GDL +A +F I + N SWN +IA +G R+
Sbjct: 164 IKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAI--PDPNTVSWNSIIAAQVTNGCARE 221
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
+++F++M G++ D T ++L AC H G+ M ++ ++D
Sbjct: 222 GIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLD 281
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-EIAANYLFQ------LEPEHT 511
+ G L ++ + ++ + W A+L HG A LF+ LEP+H
Sbjct: 282 TYAKLGRLSASYGVFTEVGF-ADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHV 340
Query: 512 GYFVLMS 518
+ L+S
Sbjct: 341 TFTHLLS 347
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/676 (33%), Positives = 372/676 (55%), Gaps = 15/676 (2%)
Query: 15 LLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL CN + Q+ + + G + L +G ++ Y + A LF +
Sbjct: 155 LLSGCNGHEMGNQITQVQTQIIKLGY-DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI 213
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S S+ N MI Y+ +G + + L+ M+ SG+ +TF VL A I+ G+
Sbjct: 214 DSVSY--NAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQ 271
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I+T F+ + +V AL+D Y+K D K+FDEM +D VS+ V+I+ Y K
Sbjct: 272 IHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGK 331
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ A LF++ Q ++ S D + +H I ++ + NS
Sbjct: 332 HKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS 391
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MYA+CG E+A ++F + R + W +M++ Y+Q G E L LF++M+ + +
Sbjct: 392 LVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIAD 451
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T L+ A + S LG++ H +II S + +A++D+YAKCG + A F
Sbjct: 452 QATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ 511
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ +RN+ SWN +I+ Y +G L+ F +M+ G++PD ++F +LSACSH+GL+
Sbjct: 512 EM--PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLV 569
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F MT++ + P +HYA +VDML R+G EA ++ +MP+ P++ +W ++L
Sbjct: 570 EEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLN 629
Query: 491 ACRIH-----GEIAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACRIH AA+ LF +E +V MSNIYAA+ +W V K+ + M+++G+KK
Sbjct: 630 ACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKK 689
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
A+S +E + F DR +P +E+ KK++ + ++ GY PD SCALH+ +++
Sbjct: 690 LPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKF 749
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+ L YHSE+LA+AF +++ + + V KNLR C DCH+A + IS I R+I VRD+
Sbjct: 750 KVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDST 809
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC D+W
Sbjct: 810 RFHHFRDGFCSCGDFW 825
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 233/480 (48%), Gaps = 16/480 (3%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y G AR LF+ + + + W +I Y+ E EL+ M+R G
Sbjct: 89 MISGYVKSGNLGEARKLFDGMVERTAVT--WTILIGGYSQLNQFKEAFELFVQMQRCGTE 146
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ TF +L C + + + V II+ G+ S V LVD Y K + D C++
Sbjct: 147 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 206
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F EM D VS+ MIT Y + E+A+ LF + Q GL T +V A L D+
Sbjct: 207 FKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDI 266
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ Q +H + I F+ ++ + N+++ Y++ +V AR +FD M ++D +S+N +++GY
Sbjct: 267 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY 326
Query: 288 IQNGQASEALLLFDEMQNS--DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+G+ A LF E+Q + D K P ++ +++ T ++GR+ H I +
Sbjct: 327 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTL--DWEMGRQIHAQTIVTTADS 384
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ + N+++DMYAKCG + AE +F ++ + R+ W +I+ Y G + L+ F++
Sbjct: 385 EILVGNSLVDMYAKCGKFEEAEMIFTNL--THRSAVPWTAMISAYVQKGFYEEGLQLFNK 442
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M + V D TF S+L A + + G++ + + K V + ++D+ + G
Sbjct: 443 MRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGS 502
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANY-------LFQLEPEHTGYFVLMS 518
+ +A ++MP N W A++ A +GE A L L+P+ + ++S
Sbjct: 503 IKDAVQTFQEMP-DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 561
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 12/233 (5%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N +++ Y + GN+ +AR +FD M +R ++W ++ GY Q Q EA LF +MQ +
Sbjct: 87 NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 146
Query: 310 PNPVTALILVSACTYLGSRQLGRKF---HGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
P+ VT + L+S C ++G + II + N ++D Y K LD A
Sbjct: 147 PDYVTFVTLLSGC---NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA 203
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F ++ E + S+N +I GY G KA+ F +M G+KP TF ++L C+
Sbjct: 204 CQLFKEM--PEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CA 259
Query: 427 HAGLID--EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ GL D G++ + + K + V ++D + + +A + +MP
Sbjct: 260 NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP 312
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 33/171 (19%)
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY---GMHG 394
I+ + D + N + + K G+L A +F + +N S N++I+GY G G
Sbjct: 43 IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKM--PHKNTVSTNMMISGYVKSGNLG 100
Query: 395 HGRK----------------------------ALEFFSQMLEEGVKPDHITFTSILSACS 426
RK A E F QM G +PD++TF ++LS C+
Sbjct: 101 EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCN 160
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ ++ + + KL + +VD ++ L A + K+MP
Sbjct: 161 GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 211
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 332/556 (59%), Gaps = 13/556 (2%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H + ++ D ++ LV Y K G +D K+FD+M +DLVSW +I+ + +
Sbjct: 61 IHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRC-- 118
Query: 192 PEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+L F + E + + VTI+S+ SA G + + +HG+ I ++ + N
Sbjct: 119 LHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGKYIHGFGIKVGGTLEVKVAN 176
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
S++ MY + G++ A +F+ + + +SWNS++ + NG A E + F++M+ +
Sbjct: 177 SLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQ 236
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ T L L+ AC +LG +L HG + + T+ A++D YAK G L + +F
Sbjct: 237 DEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVF 296
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
++ ++R +W ++AGY HG GR+A++ F M +G++PDH+TFT +LSACSH+GL
Sbjct: 297 TEVGFADR--VAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGL 354
Query: 431 IDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++EG+ F M+++ ++P V HY+CMVD+LGR G L +A+++I+ MP+ PN VWGALL
Sbjct: 355 VNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALL 414
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+HG I A +L +EP ++++SN+Y+AS W++ K+R +K +GLK+
Sbjct: 415 GACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKR 474
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
+S IEYG F DR +P +++Y K+E + +I+ AGY L DVE+E
Sbjct: 475 TPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEV 534
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E M+N HSEKLA+AFG++ + +TKNLR+C DCHS + IS I +R II+RD
Sbjct: 535 KEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPK 594
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 595 RFHHFSDGFCSCADYW 610
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 202/416 (48%), Gaps = 18/416 (4%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+ SC +++ R+IH+ + S L +G +++ Y G A LF+ + + S
Sbjct: 49 VNSCPSISNCREIHARVFKSLLYRDGF-IGDQLVTCYNKLGYAEDALKLFDDMPHKDLVS 107
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
WN++I ++ H +L + TM+ + N T ++ AC N + GK +HG
Sbjct: 108 --WNSLISGFSRCLHM--SLTAFYTMKFEMSVKPNEVTILSMISAC--NGALDAGKYIHG 161
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
I+ G + V +L++MY K G C++F+ + + VSW +I A E
Sbjct: 162 FGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCARE 221
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+ F K ++ G+ D TI+++ A LG A+++HG C F + I +++
Sbjct: 222 GIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLD 281
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
YA+ G + + VF + D ++W +ML GY +G EA+ LF+ M N +P+ VT
Sbjct: 282 TYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVT 341
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR--NAVMDMYAKCGDLDTAENMFND 372
L+SAC++ G G+ + +++ I+ + + ++D+ +CG L+ A + +
Sbjct: 342 FTHLLSACSHSGLVNEGKSYFN-VMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQN 400
Query: 373 IHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKP-DHITFTSILSA 424
+ P E N W L+ +HG+ G++ E M E + P ++I +++ SA
Sbjct: 401 M-PMEPNAGVWGALLGACRVHGNIELGKEVAEHLINM--EPLDPRNYIMLSNMYSA 453
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 144/307 (46%), Gaps = 15/307 (4%)
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
AV + + +H + D I + +V Y + G E A +FD M +DL+S
Sbjct: 48 AVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVS 107
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
WNS+++G+ + S L F M+ KPN VT L ++SAC G+ G+ HG+
Sbjct: 108 WNSLISGFSRCLHMS--LTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGKYIHGFG 163
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
I ++ + N++++MY K GDL +A +F I + N SWN +IA +G R+
Sbjct: 164 IKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAI--PDPNTVSWNSIIAAQVTNGCARE 221
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
+++F++M G++ D T ++L AC H G+ M ++ ++D
Sbjct: 222 GIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLD 281
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-EIAANYLFQ------LEPEHT 511
+ G L ++ + ++ + W A+L HG A LF+ LEP+H
Sbjct: 282 TYAKLGRLSASYGVFTEVGF-ADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHV 340
Query: 512 GYFVLMS 518
+ L+S
Sbjct: 341 TFTHLLS 347
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/670 (35%), Positives = 367/670 (54%), Gaps = 68/670 (10%)
Query: 26 RQIHSSLTTSGLINQALHLGA--------KIIIKYTTYGEPNTARSLFNSIHNDKSYSFL 77
R+IH L + + LH+ K I + + +AR++F + + +
Sbjct: 51 RRIH--LVSPNNVTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVT-- 106
Query: 78 WNTMIRAYAN-NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WNTM+ Y G E EL+ I E V +I
Sbjct: 107 WNTMLSGYTKVAGKVKEAHELFDK-------------------------IPEPDSVSYNI 141
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ +L V+AAL F++M V+D+ SW +I+ + Q + ++A
Sbjct: 142 MLVCYLRSYGVKAALA--------------FFNKMPVKDIASWNTLISGFAQNGQMQKAF 187
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF ++ +S S I S + GD+ A+ ++ N ++ + ++ +++ Y
Sbjct: 188 DLFSVMPEKNGVSWSAMI----SGYVEHGDLEAAEELYK----NVGMKSVVVETAMLTGY 239
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+ G VE A +F M ++L++WNSM+ GY++N +A + L +F M S +PNP++
Sbjct: 240 MKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLS 299
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ C+ L + LGR+ H + S + D T +++ MY KCGDLD+A +F ++
Sbjct: 300 SVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEM--P 357
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
++V +WN +I+GY HG GRKAL F +M +KPD ITF +++ AC+HAG +D G +
Sbjct: 358 RKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQ 417
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F M K ++ + HY C++D+LGRAG L EA +IK+MP P+ +++G LL ACRIH
Sbjct: 418 YFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIH 477
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
E AA L L+P +V ++NIYAA+NKW +V K+R+ MK + K +S
Sbjct: 478 KNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSW 537
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
IE F ++DR++P ++KK+ + ++K+AGY+PDL ALHDVE+E +E +L
Sbjct: 538 IEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLL 597
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
+HSEKLA+AFG+M P ++V KNLRVC DCH A +FIS I +R+IIVRD RFHHF
Sbjct: 598 WHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFR 657
Query: 671 GGTCSCNDYW 680
G CSC DYW
Sbjct: 658 NGFCSCGDYW 667
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/661 (34%), Positives = 364/661 (55%), Gaps = 43/661 (6%)
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGISSNSYTFPFV 116
P+ R LF S+ + S+ N +I +++ G +++LY + +R + T +
Sbjct: 96 PDMER-LFASMPERDAVSY--NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAM 152
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV--- 173
+ ++ S G VH ++R GF + ++V + LVDMYAK G D +VF EM
Sbjct: 153 IMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212
Query: 174 ----------------------------RDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
RD ++WT M+T Q EAL +F++ + E
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ D T S+ +A G L + + +H Y + +++ + +++V MY++C ++ A
Sbjct: 273 GVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF M R++ISW +M+ GY QN + EA+ F EMQ KP+ T ++S+C L
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
S + G +FH + S + T+ NA++ +Y KCG ++ A +F+++ S + SW
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM--SFHDQVSWTA 450
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-L 444
L+ GY G ++ ++ F +ML G+KPD +TF +LSACS AGL+++G F M K
Sbjct: 451 LVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDH 510
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----A 499
+ P HY CM+D+ R+G EA + IKQMP P+ W LL +CR+ G + A
Sbjct: 511 DIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWA 570
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A L + +P++ +VL+ +++AA +W EV LR M+++ +KK S I+Y +
Sbjct: 571 AENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHI 630
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F D+ +P+ +Y+K+E + ++ GY PD+S LHDV D D+ HM+++HSEKLA+A
Sbjct: 631 FSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIA 690
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG++ + E +++ KNLRVC DCH+A +FIS I R I+VRDA RFH F GTCSC D+
Sbjct: 691 FGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDF 750
Query: 680 W 680
W
Sbjct: 751 W 751
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 141/341 (41%), Gaps = 65/341 (19%)
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQNSIVAMYARCGNVEKARLVFD- 270
I+S A+ G V A AVH I FL+ + N ++ YA+ G + +AR VFD
Sbjct: 15 ILSSAAGDGGRTGVRVAGAVHCL-ILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDE 73
Query: 271 ------------------------------MMEKRDLISWNSMLTGYIQNGQASEALLLF 300
M +RD +S+N+++TG+ G + ++ L+
Sbjct: 74 MPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLY 133
Query: 301 DE-MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
++ +P +T ++ + L R LG H ++ A + + ++DMYAK
Sbjct: 134 RALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAK 193
Query: 360 CGDLDTAENMFNDIHPS-----------------------------ERNVSSWNVLIAGY 390
G + A +F ++ +R+ +W ++ G
Sbjct: 194 MGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGL 253
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+G +AL+ F +M EGV D TF SIL+AC +EG++ A +T+ + V
Sbjct: 254 TQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNV 313
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ +VDM + + A + ++M N W A+++
Sbjct: 314 FVGSALVDMYSKCRSIRLAEAVFRRMTC-RNIISWTAMIVG 353
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/678 (34%), Positives = 370/678 (54%), Gaps = 22/678 (3%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L C + + IH + SGL Q L + + Y G A+ +F+ S
Sbjct: 235 LTVCATIRQAQAIHFIVRESGL-EQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVS 293
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
WN M+ AYA +GH E L++ M GIS + T C+S G+++HG
Sbjct: 294 --WNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRF---GRMIHGC 348
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+ G D + AL+DMY +CG ++ +F + + VSW MI Q + + A
Sbjct: 349 ALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRA 407
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA----VHGYAICNAFLEDLCIQNS 251
+ LFQ+ Q EG+ T +++ AV + +A A +H + + + I +
Sbjct: 408 VELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTA 467
Query: 252 IVAMYARCGNVEKARLVFD---MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+V MYA CG +++A F M ++ D++SWN++++ Q+G AL F M
Sbjct: 468 VVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGV 527
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
PN +T + ++ AC + G H ++ +S M+ + + A+ MY +CG L++A
Sbjct: 528 APNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESARE 587
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F + ER+V +N +IA Y +G +AL+ F +M +EG +PD +F S+LSACSH
Sbjct: 588 IFEKV-AVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHG 646
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL DEG + F M + + P HYAC VD+LGRAG L +A ++I+ M + P VW
Sbjct: 647 GLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKT 706
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACR + G +A + + +L+P +V++SNI A + KW E ++R +M+++GL
Sbjct: 707 LLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGL 766
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
+K A S IE + F DR +P +E+Y+++E + EI+ GY+PD L V++
Sbjct: 767 RKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDE 826
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
++E +L HSE+LA+A G+M+ + + V+V KNLRVC DCH+A +FIS I ++I+VRD
Sbjct: 827 AEKERLLCQHSERLAIALGVMSSSTD-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRD 885
Query: 663 ANRFHHFEGGTCSCNDYW 680
+RFHHF G+CSC DYW
Sbjct: 886 THRFHHFVDGSCSCGDYW 903
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 237/483 (49%), Gaps = 21/483 (4%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
L+ R+IH+ + + GL + LG ++ Y +F+ + S W
Sbjct: 43 RLLSQGRRIHARIVSLGLEEE---LGNHLLRLYLKCESLGDVEEVFSRLEVRDEAS--WT 97
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
T+I AY +G + ++ M++ G+ ++ TF VLKACA + +G+ +H I+ +
Sbjct: 98 TIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVES 157
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
G S + L+ +Y CG +F++M RDLVSW I A Q+ AL LF
Sbjct: 158 GLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELF 216
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
Q+ Q EG+ +T+V A+ + +AQA+H + + L + ++ + YAR
Sbjct: 217 QRMQLEGVRPARITLV---IALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARL 273
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G++ +A+ VFD +RD++SWN+ML Y Q+G SEA LLF M + P+ VT LV
Sbjct: 274 GHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT---LV 330
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+A T S + GR HG + + D L NA++DMY +CG + A ++F I P N
Sbjct: 331 NASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI-PC--N 387
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS----HAGLIDEGR 435
SWN +IAG G ++A+E F +M EG+ P T+ ++L A + A + EGR
Sbjct: 388 AVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGR 447
Query: 436 KCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV--WGALLLACR 493
K + + E +V M G + EA ++ + V W A++ +
Sbjct: 448 KLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLS 507
Query: 494 IHG 496
HG
Sbjct: 508 QHG 510
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 216/440 (49%), Gaps = 24/440 (5%)
Query: 107 SSNSYTFPF----VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
SS+ T P +L+A + L+ +G+ +H I+ G + + L+ +Y KC
Sbjct: 22 SSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLG 79
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
D +VF + VRD SWT +ITAY + + + A+ +F + QQEG+ D+VT ++V A
Sbjct: 80 DVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACA 139
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
+LGD+ + +++H + + + + N ++ +Y CG V A L+F+ ME RDL+SWN+
Sbjct: 140 RLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNA 198
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
+ Q+G AL LF MQ +P +T +I ++ C + Q H + S
Sbjct: 199 AIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQ---AIHFIVRESG 255
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
++ + A+ YA+ G L A+ +F+ +ER+V SWN ++ Y HGH +A
Sbjct: 256 LEQTLVVSTALASAYARLGHLYQAKEVFD--RAAERDVVSWNAMLGAYAQHGHMSEAALL 313
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
F++ML EG+ P +T + + CS + GR + + ++ ++DM R
Sbjct: 314 FARMLHEGISPSKVTLVNASTGCSS---LRFGRMIHGCALEKGLDRDIVLGNALLDMYTR 370
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYLFQ------LEPEHTGYFV 515
G EA + K++P N W ++ G++ A LFQ + P Y
Sbjct: 371 CGSPEEARHLFKRIPC--NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLN 428
Query: 516 LMSNIYAASNKWREVGKLRE 535
L+ + + + R + + R+
Sbjct: 429 LLEAVASNPEEARAMAEGRK 448
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/595 (37%), Positives = 336/595 (56%), Gaps = 71/595 (11%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP---EEALILFQKTQQEGL 207
L+ Y +CG D +VF++M V+ V+W ++ A+ A+KP E A LF+K Q
Sbjct: 47 LIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAF--AKKPGHFEYARQLFEKIPQPNT 104
Query: 208 LSDSV------------------------------TIVSVASAVGQLGDVLK-------- 229
+S ++ T++S + VG +G+ +
Sbjct: 105 VSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEK 164
Query: 230 -----AQAVHGYAICN-----------AFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
+ V GY C A + + +++ Y + G VE A +F M
Sbjct: 165 NCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMS 224
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
R L++WN+M+ GY++NG+A + L LF M + KPN ++ ++ C+ L + QLG++
Sbjct: 225 MRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQ 284
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
H + + D T +++ MY+KCGDL A +F I ++V WN +I+GY H
Sbjct: 285 VHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELF--IQIPRKDVVCWNAMISGYAQH 342
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEV 450
G G+KAL F +M +EG+KPD ITF ++L AC+HAGL+D G + F M + + KPE
Sbjct: 343 GAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPE- 401
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
HYACMVD+LGRAG L EA D+IK MP P+ +++G LL ACRIH E AA L +
Sbjct: 402 -HYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLE 460
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
L+P +V ++N+YAA N+W V +R MK+ + K +S IE + GF ++DR
Sbjct: 461 LDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDR 520
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
++P +++K++ + ++K+AGY+PDL LHDV +E +E +L +HSEKLA+AFG++ +
Sbjct: 521 LHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKV 580
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLRVC DCHSA ++IS I R+IIVRD RFHHF+ G CSC DYW
Sbjct: 581 PLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 170/357 (47%), Gaps = 27/357 (7%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR F+S+ S WNTMI A A G E L+S M K C
Sbjct: 123 ARGFFDSMPLKDVAS--WNTMISALAQVGLMGEARRLFSAMPE--------------KNC 166
Query: 121 ASNSLILEGKVVHGDI------IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
S S ++ G V GD+ + A++ Y K G+ + ++F EMS+R
Sbjct: 167 VSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMR 226
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
LV+W MI Y + + E+ L LF+ + G+ +++++ SV L + + VH
Sbjct: 227 TLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVH 286
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
D S+V+MY++CG+++ A +F + ++D++ WN+M++GY Q+G
Sbjct: 287 QLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGK 346
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--A 352
+AL LFDEM+ KP+ +T + ++ AC + G LG ++ + + I+ +
Sbjct: 347 KALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFN-TMRRDFGIETKPEHYAC 405
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
++D+ + G L A ++ + P + + + + L+ +H + A EF ++ L E
Sbjct: 406 MVDLLGRAGKLSEAVDLIKSM-PFKPHPAIYGTLLGACRIHKNLNLA-EFAAKNLLE 460
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 70/308 (22%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN-GQASEALLLFDEMQNSDC 308
N ++A Y RCG+++ A VF+ M+ + ++WNS+L + + G A LF+++
Sbjct: 45 NKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP---- 100
Query: 309 KPNPVTALILVSACTY--LGSRQLGRKFHGY----IINSNMKIDATLR------------ 350
+PN V+ I++ AC + LG F + + N I A +
Sbjct: 101 QPNTVSYNIML-ACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFS 159
Query: 351 ----------NAVMDMYAKCGDLDT-------------------------------AENM 369
+A++ Y CGDLD AE +
Sbjct: 160 AMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERL 219
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F ++ S R + +WN +IAGY +G L F MLE GVKP+ ++ TS+L CS+
Sbjct: 220 FQEM--SMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLS 277
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGAL 488
+ G++ + K + + +V M + G L +A+++ Q +P D V W A+
Sbjct: 278 ALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQ--IPRKDVVCWNAM 335
Query: 489 LLACRIHG 496
+ HG
Sbjct: 336 ISGYAQHG 343
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/516 (40%), Positives = 320/516 (62%), Gaps = 8/516 (1%)
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M D VSW +I + E+AL FQK + + D T+ SV ++ + + A
Sbjct: 1 MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+VH I F + N+++ MYA+ G ++ A +VF M +D++SW S++TGY N
Sbjct: 61 ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G EA+ LF +M+ S P+ + ++SAC L G++ H ++ S ++ ++
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N+++ MYAKCG + A F+++ P+ R+V SW LI GY +G G+ +L+F+ QM+ G
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNM-PT-RDVISWTALIVGYAQNGRGKHSLQFYDQMIATG 238
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEA 469
KPD+ITF +L ACSH GL+ GR F M K+ +KP +HYACM+D+LGR+G L EA
Sbjct: 239 TKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEA 298
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAAS 524
++ QM + P+ VW ALL ACR+H GE+AA LF+LEP ++ +V++SN+Y+A+
Sbjct: 299 KGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAA 358
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
KW + ++R M+++G+ K +S IE + F + DR +P E+Y K++ + + I
Sbjct: 359 GKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLI 418
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K AGY+PD+S ALHD +DE +E L YHSEKLAVAFG++ + A +++ KNLRVC DCH
Sbjct: 419 KEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCH 478
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A ++ S +Y R II+RD+N FHHF G CSC DYW
Sbjct: 479 TAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 162/317 (51%), Gaps = 2/317 (0%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN++I G + L + MR + + YT P VL + AS ++ VH II
Sbjct: 9 WNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLII 68
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+TGF + V AL+DMYAK G+ D VF +M +D+VSWT ++T Y EEA+
Sbjct: 69 KTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIK 128
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF K + G+ D + + SV SA +L + Q +H + + L + NS+V MYA
Sbjct: 129 LFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYA 188
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG++ A FD M RD+ISW +++ GY QNG+ +L +D+M + KP+ +T +
Sbjct: 189 KCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIG 248
Query: 318 LVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
L+ AC++ G GR F +K ++D+ + G L A+ + N + +
Sbjct: 249 LLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVA 308
Query: 377 ERNVSSWNVLIAGYGMH 393
V W L+A +H
Sbjct: 309 PDAV-VWKALLAACRVH 324
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/635 (34%), Positives = 357/635 (56%), Gaps = 11/635 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ PN A+ L + W +I NG+ L +S MRR I N +
Sbjct: 2 YSKLDLPNPAQLLLQLTPTRCVVT--WTALISGSVQNGYFSSALLYFSKMRRENIKPNDF 59
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TFP KA + L GK +H ++ G ++D +V + DMY+K G + ++FDEM
Sbjct: 60 TFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
R++ W I+ +P +A+ F + ++ G D +T + +A + +
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+HG I + F D+ + N I+ +Y +C VE A +VF+ M +R+ +SW +M+ QN
Sbjct: 180 QLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQND 239
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+ +A ++F + + ++SA + + GR H + + ++ D + +
Sbjct: 240 EKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGS 299
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
A++DMY KCG ++ E +F+++ ERN+ SWN +I+GY G A+ F +M E V
Sbjct: 300 ALVDMYGKCGSIEDCEQVFHEM--PERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV 357
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAF 470
+++T +LSACS G + G + F M + ++P +HYAC+ DMLGRAG + A+
Sbjct: 358 A-NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAY 416
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASN 525
+ +++MP+ P SVWGALL ACR++GE IAA+ LF+L+P+ +G VL+SN++AA+
Sbjct: 417 EFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAG 476
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
+W E +R++MK+ G+KK A S + + F D + E+ + + E++
Sbjct: 477 RWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQ 536
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
AGYMPD + AL+D+E+E++ + YHSEK+A+AFG++ L P +++TKNLR+C DCHS
Sbjct: 537 AAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHS 596
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
AF+FIS I R+IIVRD NRFH F CSC D+W
Sbjct: 597 AFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 206/426 (48%), Gaps = 13/426 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+QIH+ G IN +G Y+ G A+ LF+ + +WN I
Sbjct: 78 KQIHAIALKLGQINDKF-VGCSAFDMYSKTGLKFEAQRLFDEMPPRNVA--VWNAYISNA 134
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+G + ++ + RR G + TF L ACA + G+ +HG +IR+GF D
Sbjct: 135 VLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDV 194
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V ++D+Y KC + + VF+ M R+ VSW M+ A EQ ++ E+A ++F ++E
Sbjct: 195 SVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKE 254
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + SV SA + + ++VH A+ D+ + +++V MY +CG++E
Sbjct: 255 GIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDC 314
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF M +R+L+SWN+M++GY G A+ LF+EMQ S+ N VT + ++SAC+
Sbjct: 315 EQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQ-SEAVANYVTLICVLSACSRG 373
Query: 326 GSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
G+ +LG + F ++ A + DM + G ++ A + P +S W
Sbjct: 374 GAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKM-PIRPTISVWG 432
Query: 385 VLIAG---YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
L+ YG G+ A + + L+ +H+ +++ +A AG DE +M
Sbjct: 433 ALLNACRVYGEPELGKIAADNLFK-LDPKDSGNHVLLSNMFAA---AGRWDEATLVRKEM 488
Query: 442 TKLSVK 447
+ +K
Sbjct: 489 KDVGIK 494
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 186/399 (46%), Gaps = 8/399 (2%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY+K + + R +V+WT +I+ Q AL+ F K ++E + + T
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
A L + +H A+ + D + S MY++ G +A+ +FD M
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
R++ WN+ ++ + +G+ +A+ F E + +P+ +T ++AC LGR+
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
HG +I S + D ++ N ++D+Y KC +++ AE +FN + RN SW ++A +
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGM--GRRNSVSWCTMVAACEQN 238
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY 453
KA F +EG++ +S++SA + ++ GR A K V+ ++
Sbjct: 239 DEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVG 298
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AANYLFQLEPEHT 511
+ +VDM G+ G + + + +MP N W A++ G++ A +++ E
Sbjct: 299 SALVDMYGKCGSIEDCEQVFHEMP-ERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV 357
Query: 512 GYFVLMSNIYAASNKWREV---GKLREDMKNKGLKKPAA 547
+V + + +A ++ V ++ E M+++ +P A
Sbjct: 358 ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGA 396
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/677 (36%), Positives = 370/677 (54%), Gaps = 17/677 (2%)
Query: 14 QLLKSCNFLASLR---QIHSSLTTSGLINQA-LHLGAKIIIKYTTYGEPNTARSLFNSIH 69
LL + L SL+ QIHS L T+ N A L +++ Y G + LFN+
Sbjct: 102 HLLNNAAKLKSLKHATQIHSQLVTTN--NHASLANINTLLLLYAKCGSIHHTLLLFNTYP 159
Query: 70 NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
+ + W T+I + + + L ++ MR +GI N +TF +L ACA +L+ EG
Sbjct: 160 HPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEG 219
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ +H I + FL+D +V AL+DMYAKCG VFDEM R+LVSW MI + +
Sbjct: 220 QQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKN 279
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+ A+ +F++ G D V+I SV SA L ++ + VHG + + + ++
Sbjct: 280 KLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVK 337
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
NS+V MY +CG E A +F RD+++WN M+ G + +A F M +
Sbjct: 338 NSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVE 397
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P+ + L A + + G H +++ + ++ + ++++ MY KCG + A +
Sbjct: 398 PDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQV 457
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F + E NV W +I + HG +A++ F +ML EGV P++ITF S+LSACSH G
Sbjct: 458 FRET--KEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTG 515
Query: 430 LIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
ID+G K F M + ++KP ++HYACMVD+LGR G L EA I+ MP P+ VWGAL
Sbjct: 516 KIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGAL 575
Query: 489 LLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L AC H G A LF+LEP++ G ++L+SNIY E ++R M G++
Sbjct: 576 LGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVR 635
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K + S I+ F+ DR + +E+Y ++ + IK GY+ + A + VE
Sbjct: 636 KESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGS 695
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
+ E L HSEKLA+AFG++ L P + V++ KNLR C DCH+ +F S I++R+IIVRD
Sbjct: 696 E-EQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDI 754
Query: 664 NRFHHFEGGTCSCNDYW 680
NRFH F G+CSC DYW
Sbjct: 755 NRFHRFTNGSCSCMDYW 771
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 201/420 (47%), Gaps = 13/420 (3%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MR G F + +L +C A L +QIH+ + +N + ++ Y G
Sbjct: 191 MRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPF-VATALLDMYAKCG 249
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
A ++F+ + + S WN+MI + N + ++ + G + + V
Sbjct: 250 SMLLAENVFDEMPHRNLVS--WNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSV 305
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L ACA + GK VHG I++ G + YV+ +LVDMY KCG +D K+F RD+
Sbjct: 306 LSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDV 365
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
V+W VMI + E+A FQ +EG+ D + S+ A + + + +H +
Sbjct: 366 VTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSH 425
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ +++ I +S+V MY +CG++ A VF ++ +++ W +M+T + Q+G A+EA
Sbjct: 426 VLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEA 485
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN-SNMKIDATLRNAVMD 355
+ LF+EM N P +T + ++SAC++ G G K+ + N N+K ++D
Sbjct: 486 IKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVD 545
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+ + G L+ A + P E + W L+ G H + E ++ + ++PD+
Sbjct: 546 LLGRVGRLEEACRFIESM-PFEPDSLVWGALLGACGKHANVEMGREVAERLFK--LEPDN 602
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/656 (34%), Positives = 375/656 (57%), Gaps = 20/656 (3%)
Query: 36 GLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETL 95
G + +G +I + G+ R +F+ + + +W +I YA +G+ E +
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLF--ERTVVVWTLLITRYAQSGYSDEAV 240
Query: 96 ELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
EL+ M +G + YT +L AC G+ +H +R G SDS V LVDMY
Sbjct: 241 ELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMY 300
Query: 156 AKC--GQT-DDGCKVFDEMSVRDLVSWTVMITAYEQ-AEKPEEALILFQKTQQEGLLSDS 211
AK GQ+ + +VF+ M ++++WT +++ Y Q + + +ILF K EG+ +
Sbjct: 301 AKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNH 360
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
+T S+ A LGD + +H + + + + + N++V+MYA G++E+AR FD
Sbjct: 361 ITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQ 420
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ +++++S++ L G ++ + +++ + + T L+SA +G G
Sbjct: 421 LYEKNMVSFSGNLDGDGRSNTYQDY-----QIERMELGISTFTFGSLISAAASVGMLTKG 475
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ H + + D + N+++ MY++CG L A +F+++ ++ NV SW +I+G
Sbjct: 476 QRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM--NDHNVISWTSMISGLA 533
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEV 450
HG+ +ALE F M+ GVKP+ +T+ ++LSACSHAGL+ EG++ F M K + P +
Sbjct: 534 KHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRM 593
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
+HYACMVD+LGR+G + +A D I +MP + VW LL AC+ H GEIAAN++ Q
Sbjct: 594 EHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQ 653
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
LEP+ +VL+SN+YA + W +V ++R M++K L K S + I F D
Sbjct: 654 LEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDT 713
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P +E+Y K+E++ EIK+ GY+PD S LHD+ DE +E L HSEK+AVAFG+++
Sbjct: 714 SHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISC 773
Query: 626 TPEA-VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
T +++ KNLRVC DCHSA +++S R+II+RD+NRFH + G CSC +YW
Sbjct: 774 TSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 242/500 (48%), Gaps = 21/500 (4%)
Query: 32 LTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHC 91
L T L+ + ++ Y+ ARS+F+ + W M + NG
Sbjct: 74 LRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAE 133
Query: 92 VETLELYSTMRRSGISSNSYTFPFVLKACASNSLI-LEGKVVHGDIIRTGFL-SDSYVQA 149
E L L+ G+ N++T +AC ++ L L G V G + + GF +D V
Sbjct: 134 AEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGC 193
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
AL+DM+AK G +VFD + R +V WT++IT Y Q+ +EA+ LF + G
Sbjct: 194 ALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQP 253
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN---VEKAR 266
D T+ S+ SA +LG Q +H A+ D C+ +V MYA+ N + AR
Sbjct: 254 DQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAR 313
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNG-QASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ M K ++++W ++L+GY+Q G Q ++ ++LF +M N +PN +T ++ AC L
Sbjct: 314 EVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANL 373
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G + GR+ H + + SN+ + NA++ MYA+ G ++ A + F+ ++ E+N+ S++
Sbjct: 374 GDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLY--EKNMVSFSG 431
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+ G G ++ + +E G+ TF S++SA + G++ +G++ A K
Sbjct: 432 NLDG---DGRSNTYQDYQIERMELGIST--FTFGSLISAAASVGMLTKGQRLHALSLKAG 486
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYLF 504
+ +V M R G L +A + +M N W +++ HG A A LF
Sbjct: 487 FGSDRAIGNSLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMISGLAKHGYAARALELF 545
Query: 505 Q------LEPEHTGYFVLMS 518
++P Y ++S
Sbjct: 546 HDMIAAGVKPNDVTYIAVLS 565
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 193/359 (53%), Gaps = 14/359 (3%)
Query: 129 GKVVHGDIIRTGFL--SDSYVQAALVDMYAKCGQTDDGCKVFDEMSV--RDLVSWTVMIT 184
G+ + G ++RTG L +D+ V +L+ +Y+KC VFD M V RDLVSWT M +
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA--VGQLGDVLKAQAVHGYAICNAF 242
+ EAL LF +T +EGLL ++ T+ + A +L L AV G F
Sbjct: 126 CLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFH-LAGGAVLGLVFKLGF 184
Query: 243 L-EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
D+ + +++ M+A+ G++ R VFD + +R ++ W ++T Y Q+G + EA+ LF
Sbjct: 185 WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFL 244
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
+M + +P+ T ++SACT LGS +LG++ H + ++ D+ + ++DMYAK
Sbjct: 245 DMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSH 304
Query: 362 D---LDTAENMFNDIHPSERNVSSWNVLIAGYGMHG-HGRKALEFFSQMLEEGVKPDHIT 417
+ L A +FN + + NV +W L++GY G + + F +ML EG++P+HIT
Sbjct: 305 NGQSLHNAREVFNRM--PKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHIT 362
Query: 418 FTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
++S+L AC++ G D GR+ K ++ +V M +G + EA Q+
Sbjct: 363 YSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/562 (37%), Positives = 338/562 (60%), Gaps = 14/562 (2%)
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYA--KCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
E K VH +++ +S+ + LV A G D C +F ++ + MI
Sbjct: 3 EFKQVHAQVLK---WENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMIRG 59
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y E AL L+ + + G+ SD+ T ++ A L + + +HGY D
Sbjct: 60 YVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGD 119
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-Q 304
L +QNS++ MY +CG +E + VF+ M++RD+ SW++++ + G SE L +F EM +
Sbjct: 120 LFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEMSR 179
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
C+P + ++SACT+LG+ LGR H ++ + +++ ++ +++DMY KCG ++
Sbjct: 180 EGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIE 239
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
++F + ++N S++V+I G MHG G +AL+ FS MLEEG+KPD + + +LSA
Sbjct: 240 KGLSLFQRM--VKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSA 297
Query: 425 CSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
C+HAGL+DEG +CF M + ++P ++HY C+V ++GRAG L +A + I+ MP+ PN+
Sbjct: 298 CNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEV 357
Query: 484 VWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
VW LL AC+ H GEIAA L +L + G +V++SN+YA + +W +V K+R +M
Sbjct: 358 VWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMA 417
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
KG + FS+++ + I F + D +P K +Y+ + M ++K GY PD S L
Sbjct: 418 RKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLF 477
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
DV++E++ L HS+KLA+AF +++ + A +++ +NLR+CNDCH+ + IS IY+R+I
Sbjct: 478 DVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREI 537
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
VRD NRFHHF+ GTCSC DYW
Sbjct: 538 TVRDRNRFHHFKDGTCSCRDYW 559
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 184/374 (49%), Gaps = 38/374 (10%)
Query: 53 TTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYT 112
+ +G + A S+F I D+ +F +NTMIR Y N + L LY M G+ S+++T
Sbjct: 30 SDWGSMDYACSIFRQI--DQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFT 87
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
+P + KACAS I EG +HG I + G D +VQ +L++MY KCG+ + C VF+ M
Sbjct: 88 YPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMD 147
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI-VSVASAVGQLGDVLKAQ 231
RD+ SW+ +I A+ E L +F + +EG +I VSV SA LG + +
Sbjct: 148 RRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGR 207
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
H + N ++ +Q S++ MY +CG +EK +F M K++ +S++ M+TG +G
Sbjct: 208 CTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHG 267
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+ EAL +F +M KP+ V L ++SAC + G
Sbjct: 268 RGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAG------------------------- 302
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
++D +C + E H E + + ++ G G KALE M +
Sbjct: 303 -LVDEGLQCFNRMKLE------HGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSM---PI 352
Query: 412 KPDHITFTSILSAC 425
KP+ + + +LSAC
Sbjct: 353 KPNEVVWRGLLSAC 366
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 256/761 (33%), Positives = 409/761 (53%), Gaps = 115/761 (15%)
Query: 22 LASLRQIHSSLTTSGLINQALH---LGAKIIIKYTTY--GEPNTARSLFNSIHNDKSYSF 76
+ LRQ+H+ + I+ +LH ++I + T P+ LFNS N + F
Sbjct: 14 FSHLRQLHAQI-----IHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVF 68
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF---------------VLK--- 118
+M+R Y++ + + ++ M+ G+ +++ +P VLK
Sbjct: 69 --TSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGIGFHAHVLKLGH 126
Query: 119 ---ACASNSLI---------------------LEGKVVHGDIIRTGFLS-DSYVQA---- 149
A N++I E KV + + +G+ +S QA
Sbjct: 127 GSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLF 186
Query: 150 ------------ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
A+V YAK + + FD M R +VSW M++ Y Q EE L
Sbjct: 187 DVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLR 246
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGD--------------------VLKAQAVHGYA 237
LF + G+ D T V+V SA GD ++ + YA
Sbjct: 247 LFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYA 306
Query: 238 ICNAF------------LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
C + + N++++ Y R GN++ AR +F+ M R++++WNSM+
Sbjct: 307 KCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIA 366
Query: 286 GYIQNGQASEALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
GY QNGQ++ A+ LF EM + P+ VT + ++SAC +LG+ +LG ++ + +K
Sbjct: 367 GYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIK 426
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ + NA++ MY++CG ++ A+ +F ++ + R+V S+N LI+G+ HGHG +A+ S
Sbjct: 427 LSISGHNAMIFMYSRCGSMEDAKRVFQEM--ATRDVVSYNTLISGFAAHGHGVEAINLMS 484
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
M E G++PD +TF +L+ACSHAGL++EGRK F + P + HYACMVD+LGR G
Sbjct: 485 TMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD----PAIDHYACMVDLLGRVG 540
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L +A +++MP+ P+ V+G+LL A RIH GE+AAN LF+LEP+++G F+L+SN
Sbjct: 541 ELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSN 600
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IYA++ +W++V ++RE MK G+KK +S +EYG + F ADR + ++Y+ +
Sbjct: 601 IYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIE 660
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ +++ AGY+ D SC L DVE+E++E ++ HSEKLA+ + ++ AV++V KNLRV
Sbjct: 661 LRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRV 720
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+A + IS + R IIVRD NRFH F G CSC DYW
Sbjct: 721 CWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 30/291 (10%)
Query: 216 SVASAVGQLGDV--LKAQAVHG----YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
S+AS VG + L AQ +H + A L + C + Y L+F
Sbjct: 6 SIASRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTH--------LLF 57
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+ ++ + SML Y ++ +L+F+ MQ +P+ IL+ + G+
Sbjct: 58 NSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSA---GNGG 114
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
+G FH +++ DA +RNAV+DMYA+ G + A +F++I ER V+ WN +++G
Sbjct: 115 IG--FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSG 172
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
Y +A F M E V IT+T++++ + ++ R+ F M + SV
Sbjct: 173 YWKWESEGQAQWLFDVMPERNV----ITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS- 227
Query: 450 VKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ M+ + G E FD + + P+++ W ++ AC G+
Sbjct: 228 ---WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGD 275
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/770 (31%), Positives = 401/770 (52%), Gaps = 112/770 (14%)
Query: 21 FLASLRQIHSSLTTSGLIN---------QALHL----------------------GAKII 49
FL +LR +H+ L T+ L++ + LHL ++
Sbjct: 37 FLRTLRCLHARLLTAALLHDPSHPHLTLRLLHLYTLSPDLATPAVLFRADPGPVAATSLV 96
Query: 50 IKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS--GIS 107
Y G + + F+S+ + + L N MI A+A + ++ ++ S +
Sbjct: 97 SAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLR 156
Query: 108 SNSYTFPFVLKACAS--NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC---GQTD 162
+ Y+F +L A + + +H + + G + V AL+ +Y KC G T
Sbjct: 157 PDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTR 216
Query: 163 DGCKVFDEMSVRDLVSWTV-------------------------------MITAYEQAEK 191
D KV DEM +D ++WT MI+ Y Q+
Sbjct: 217 DARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGM 276
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI--CNAFLED--LC 247
EA LF++ + + D T S+ SA G L ++VHG I F+ + L
Sbjct: 277 CAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALP 336
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG---------------- 291
+ N++V +Y++ G + A +FD M +D++SWN++L+GYI++G
Sbjct: 337 VNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKS 396
Query: 292 ---------------QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
A +AL LF++M++ D KP T V+AC LG+ + G++ H
Sbjct: 397 ELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHA 456
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
+++ + + NA++ MYA+CG + A +F + P+ +VS WN +I+ G HGHG
Sbjct: 457 HLVQCGFEASNSAGNALLTMYARCGAVKDARLVFL-VMPNVDSVS-WNAMISALGQHGHG 514
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYAC 455
R+ALE F QM+ +G+ PD I+F +IL+AC+HAGL+D+G + F M + + P HYA
Sbjct: 515 REALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYAR 574
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEH 510
++D+LGRAG + EA D+IK MP P ++W A+L CRI+G++ AA+ LF++ PEH
Sbjct: 575 LIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEH 634
Query: 511 TGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYW 570
G ++L+SN Y+A+ +W + ++R+ M+++G+KK S IE G + F D +P
Sbjct: 635 DGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDA 694
Query: 571 KEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
EVY+ +E + +++ GY+PD AL D+ ++E++L HSE+LAV+FG++ L A
Sbjct: 695 HEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGAT 754
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V V KNL++C DCH+A F+S R+I+VRD RFHHF+ G CSC +YW
Sbjct: 755 VTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/651 (34%), Positives = 361/651 (55%), Gaps = 12/651 (1%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
+++ L + ++ Y+ +G ++ +F +N S WNTM+ ++ G T +L
Sbjct: 307 LDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVS--WNTMVGGFSAEGDIHGTFDL 364
Query: 98 YSTMRRSG--ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
M + ++ T + C S++ K +H ++ F+ D + A V Y
Sbjct: 365 LRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASY 424
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
AKCG +VF + + L SW +I Y Q+ P +L + + GLL D+ T+
Sbjct: 425 AKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVC 484
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
S+ SA +L + + VHG+ I N DL + S++++Y CG + +++FD ME
Sbjct: 485 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDN 544
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
L+SWN+++TG++QNG AL LF +M +P ++ + + AC+ L S +LGR+ H
Sbjct: 545 SLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAH 604
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
Y + ++ +A + +++DMYAK G + + +FN + E++ +SWN +I GYGMHG
Sbjct: 605 AYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGL--KEKSAASWNAMIMGYGMHGR 662
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
++A++ F +M G PD +TF +L+AC+H+GL+ EG + M + +KP +KHYA
Sbjct: 663 AKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYA 722
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPE 509
C++DMLGRAG L A + +M P+ +W +LL CRIH GE A LF LEPE
Sbjct: 723 CVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPE 782
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
+VL+SN+YA KW +V ++R+ MK L+K A S IE + F +R
Sbjct: 783 KPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDG 842
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
++E+ + ++I GY PD S HD+ +E++ L HSEKLA+ +G++ +
Sbjct: 843 FEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGT 902
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLR+C DCH+A + IS + R+I+VRD RFHHF G CSC DYW
Sbjct: 903 TLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 210/415 (50%), Gaps = 21/415 (5%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH ++ S + L +II Y G P+ +RS F+++ + F WN +I +Y
Sbjct: 104 RKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNL--FQWNAVISSY 161
Query: 86 ANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ N E LE++ M ++ + +++TFP V+KACA S + G VHG +++TG + D
Sbjct: 162 SRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVED 221
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V ALV Y G D K+FD M R+LVSW MI +F
Sbjct: 222 LFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIR-------------VFSDNGD 268
Query: 205 EG-LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+G + D T+V+V + ++ + VHG+A+ + ++L + N+++ MY++ G +
Sbjct: 269 DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCII 328
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPVTALILVSA 321
++++F + ++++SWN+M+ G+ G L +M + D K + VT L V
Sbjct: 329 DSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPV 388
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C ++ H Y + D L NA + YAKCG L A+ +F+ I + ++
Sbjct: 389 CFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIR--SKTLN 446
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
SWN LI GY R +L+ QM G+ PD+ T S+LSACS + G++
Sbjct: 447 SWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKE 501
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 17/285 (5%)
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
A G+ D+ + +H + L D + I+ MYA CG+ + +R FD + ++L
Sbjct: 93 ASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLF 152
Query: 279 SWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
WN++++ Y +N E L +F +M + P+ T ++ AC + +G HG
Sbjct: 153 QWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGL 212
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
++ + + D + NA++ Y G + A +F DI P ERN+ SWN +I + +G
Sbjct: 213 VVKTGLVEDLFVGNALVSFYGTHGFVSDALKLF-DIMP-ERNLVSWNSMIRVFSDNGD-- 268
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
+ PD T ++L C+ I G+ KLS+ E+ ++
Sbjct: 269 ----------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALM 318
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANY 502
DM + GC+ ++ MI ++ N W ++ G+I +
Sbjct: 319 DMYSKWGCIIDS-QMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTF 362
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/652 (34%), Positives = 356/652 (54%), Gaps = 13/652 (1%)
Query: 36 GLINQALHLGAKIIIKYTTYGEPNTARSLFNSI-HNDKSYSFLWNTMIRAYANNGHCVET 94
GL++ + + ++ Y +G AR +F + H D S +N M+ + G E
Sbjct: 169 GLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRD---SVTYNAMMMGCSKEGSHAEA 225
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
L+L++ MRR G+++ +TF VL + G+ VHG + R S+ +V +L+D
Sbjct: 226 LDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATS-SNVFVNNSLLDF 284
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
Y+KC D+ K+F EM RD VS+ VMI Y L LF++ Q ++
Sbjct: 285 YSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPY 344
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
S+ S G + + + +H + + + N+++ MY++CG ++ A+ F
Sbjct: 345 ASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKND 404
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
+ +SW +M+TG +QNGQ EAL LF M+ + P+ T + A + L LGR+
Sbjct: 405 KTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQL 464
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
H Y+I S +A++DMY KCG LD A F+++ ERN SWN +I+ Y +G
Sbjct: 465 HSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEM--PERNSISWNAVISAYAHYG 522
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHY 453
+ A++ F ML G KPD +TF S+LSACSH GL +E K F M + + P +HY
Sbjct: 523 QAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHY 582
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEP 508
+C++D LGR G + +M+ +MP + +W ++L +CR HG +AA LF +
Sbjct: 583 SCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGS 642
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
+V++SNI+A + KW + +++ M+++GL+K +S +E + F + D+ NP
Sbjct: 643 TDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNP 702
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
E+ ++E + E+ GY PD SC L V+D+ + L YHSE+LA+AF ++N P
Sbjct: 703 MITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPG 762
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNL C DCHSA + +S I R IIVRD++RFHHF+ G CSC DYW
Sbjct: 763 TPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 231/468 (49%), Gaps = 17/468 (3%)
Query: 39 NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN--NGHCVETLE 96
N A L +++ Y+ G+ + A LF S + W MI A+A+ + +
Sbjct: 64 NNAFSLN-RMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVS 122
Query: 97 LYSTMRRSGISSNSYTFPFVLK---ACASNSLILEGKVVHGDIIRTGFL-SDSYVQAALV 152
L+ M R G++ + T VL A + + +H ++ G L S+ V L+
Sbjct: 123 LFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLL 182
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
D Y K G +VF EM RD V++ M+ + EAL LF +++GL +
Sbjct: 183 DAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRF 242
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
T +V + +GD+ + VHG + A ++ + NS++ Y++C +++ + +F M
Sbjct: 243 TFSTVLTVATGVGDLCLGRQVHGL-VARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEM 301
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQ--NSDCKPNPVTALILVS-ACTYLGSRQ 329
+RD +S+N M+ GY N AS L LF EMQ + D + P +L+ V+ + ++G
Sbjct: 302 IERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIG--- 358
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
+G++ H ++ + + + NA++DMY+KCG LD A+ F I+ +++ SW +I G
Sbjct: 359 IGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNF--INKNDKTGVSWTAMITG 416
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
+G +AL+ F M G+ PD TF+S + A S+ +I GR+ + + +
Sbjct: 417 CVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSS 476
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
V + ++DM + GCL EA +MP N W A++ A +G+
Sbjct: 477 VFSGSALLDMYTKCGCLDEALQTFDEMP-ERNSISWNAVISAYAHYGQ 523
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 193/412 (46%), Gaps = 21/412 (5%)
Query: 97 LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA 156
L + M ++G +Y +L + S+ + + + + + ++++ ++ Y+
Sbjct: 21 LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHR---NNAFSLNRMLSGYS 77
Query: 157 KCGQTDDGCKVF--DEMSVRDLVSWTVMITAYEQAE--KPEEALILFQKTQQEGLLSDSV 212
+ GQ +F +RD V+WTVMI A+ A + +A+ LF+ +EG+ D V
Sbjct: 78 RSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRV 137
Query: 213 TIVSV---ASAVGQLGDVLKAQAVHGYAICNAFL-EDLCIQNSIVAMYARCGNVEKARLV 268
T+ +V A G + ++H +A+ L ++ + N+++ Y + G + AR V
Sbjct: 138 TVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRV 197
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F M RD +++N+M+ G + G +EAL LF M+ T +++ T +G
Sbjct: 198 FQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDL 257
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
LGR+ HG + + + + N+++D Y+KC LD + +F+++ ER+ S+NV+IA
Sbjct: 258 CLGRQVHGLVARATSS-NVFVNNSLLDFYSKCDCLDEMKKLFHEM--IERDNVSYNVMIA 314
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
GY + L F +M + + S+LS I G++ A + L +
Sbjct: 315 GYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSS 374
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV---WGALLLACRIHGE 497
E ++DM + G L D K + ND W A++ C +G+
Sbjct: 375 EDLVGNALIDMYSKCGML----DAAKTNFINKNDKTGVSWTAMITGCVQNGQ 422
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK--ALEFFSQMLE 408
N ++ Y++ G L A ++F P R+ +W V+I + R A+ F ML
Sbjct: 70 NRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLR 129
Query: 409 EGVKPDHITFTSIL-----SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
EGV PD +T ++L S + A +I FA L + V ++D +
Sbjct: 130 EGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGL-LHSNVVVCNTLLDAYCKH 188
Query: 464 GCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIA 499
G L A + ++M P DSV + A+++ C G A
Sbjct: 189 GLLAAARRVFQEM--PHRDSVTYNAMMMGCSKEGSHA 223
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/662 (34%), Positives = 377/662 (56%), Gaps = 16/662 (2%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+HS + G + A +GA +I Y+ G ++AR++F I +W ++ Y
Sbjct: 168 LHSPIVKLGYDSNAF-VGAALINAYSVCGSVDSARTVFEGILCKDI--VVWAGIVSCYVE 224
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
NG+ ++L+L S MR +G N+YTF LKA K VHG I++T ++ D V
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
L+ +Y + G D KVF+EM D+V W+ MI + Q EA+ LF + ++ +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV 344
Query: 208 LSDSVTIVSV--ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ + T+ S+ A+G+ + + +HG + F D+ + N+++ +YA+C ++ A
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+F + ++ +SWN+++ GY G+ +A +F E + VT + AC L
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
S LG + HG I +N + N+++DMYAKCGD+ A+++FN++ + V+SWN
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID--VASWNA 520
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-L 444
LI+GY HG GR+AL M + KP+ +TF +LS CS+AGLID+G++CF M +
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC--RIHGEIA--- 499
++P ++HY CMV +LGR+G L +A +I+ +P P+ +W A+L A + + E A
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRS 640
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A + ++ P+ +VL+SN+YA + +W V +R+ MK G+KK S IE+ D+
Sbjct: 641 AEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHY 700
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F +P K + +E + ++ AGY+PD + L D++DE+++ L HSE+LA+A
Sbjct: 701 FSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALA 760
Query: 620 FGIMNL-TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
+G++ + + + + KNLR+C+DCHSA + IS I +R +++RD NRFHHF G CSC D
Sbjct: 761 YGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGD 820
Query: 679 YW 680
+W
Sbjct: 821 HW 822
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 232/490 (47%), Gaps = 17/490 (3%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIII--KYTTYGEPNTARSLFN 66
Y +L+ C N S + IH + G L L A I+ Y G A +LF+
Sbjct: 52 YGAMLRRCIQKNDPISAKAIHCDILKKG---SCLDLFATNILLNAYVKAGFDKDALNLFD 108
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ + SF+ T+ + YA C + + LYS + R G N + F LK S
Sbjct: 109 EMPERNNVSFV--TLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+H I++ G+ S+++V AAL++ Y+ CG D VF+ + +D+V W +++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ E++L L + G + ++ T + A LG A+ VHG + ++ D
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ ++ +Y + G++ A VF+ M K D++ W+ M+ + QNG +EA+ LF M+ +
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
PN T +++ C LG + HG ++ +D + NA++D+YAKC +DTA
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F ++ S +N SWN +I GY G G KA F + L V +TF+S L AC+
Sbjct: 403 VKLFAEL--SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+D G + K + +V ++DM + G + A + +M S W
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS-WN 519
Query: 487 ALLLACRIHG 496
AL+ HG
Sbjct: 520 ALISGYSTHG 529
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 193/383 (50%), Gaps = 22/383 (5%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+G + Q+LK+C L +G ++ YT G+ + A +FN
Sbjct: 266 AKGVHGQILKTCYVLDP------------------RVGVGLLQLYTQLGDMSDAFKVFNE 307
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ K+ W+ MI + NG C E ++L+ MR + + N +T +L CA
Sbjct: 308 M--PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +HG +++ GF D YV AL+D+YAKC + D K+F E+S ++ VSW +I YE
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ +A +F++ + + VT S A L + VHG AI + +
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ NS++ MYA+CG+++ A+ VF+ ME D+ SWN++++GY +G +AL + D M++ D
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 308 CKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
CKPN +T L ++S C+ G G++ F I + ++ ++ + + G LD A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 367 ENMFNDIHPSERNVSSWNVLIAG 389
+ I P E +V W +++
Sbjct: 606 MKLIEGI-PYEPSVMIWRAMLSA 627
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 179/389 (46%), Gaps = 7/389 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
+S+ + +L+ C + + K +H DI++ G D + L++ Y K G D +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
DEM R+ VS+ + Y ++ + L+ + +EG + S L
Sbjct: 108 DEMPERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+H + + + + +++ Y+ CG+V+ AR VF+ + +D++ W +++ Y+
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
+NG ++L L M+ + PN T + A LG+ + HG I+ + +D
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ ++ +Y + GD+ A +FN++ + +V W+ +IA + +G +A++ F +M E
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEM--PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
V P+ T +SIL+ C+ G + + K+ ++ ++D+ + +
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIHGE 497
A + ++ N+ W +++ GE
Sbjct: 402 AVKLFAELS-SKNEVSWNTVIVGYENLGE 429
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/633 (36%), Positives = 362/633 (57%), Gaps = 59/633 (9%)
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS--DSYVQAALVDMYAKCG 159
R + +SS S + F+L++CA S + G+ +H II TG ++++ AL+ YA CG
Sbjct: 5 RHTALSSVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCG 64
Query: 160 QTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
KVFDE+ S +D V WT ++ + + +EAL++F + ++ G+ D VT+V +
Sbjct: 65 CAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCL 124
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAF--LEDLCIQNSIVAMYARCG--------------- 260
+LGDV+ HG + +E C N+++ MYA+ G
Sbjct: 125 FGGCARLGDVVVGAQGHGCMVKMGLGGVEKAC--NAVMDMYAKSGLMGEARRVFYEMKGQ 182
Query: 261 ----------------NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
V R+VFD M +R+ ++W M+ GY+ +G E+ L EM
Sbjct: 183 SVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMI 242
Query: 305 -NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK-IDATLRNAVMDMYAKCGD 362
+ + + N VT +++AC+ G +GR H Y + + K ++ + A++DMYAKCG
Sbjct: 243 FDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGR 302
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
+ A F + +RNV SWN +++G MHG GR AL+ F QM +E KPD +TFTS+L
Sbjct: 303 IHIAFKFFKKM--PQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDVTFTSVL 359
Query: 423 SACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
SACSH+GL+D+G F ++ + + P+V+HYACMVD+LGRAG L EA ++++MP+ PN
Sbjct: 360 SACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPN 419
Query: 482 DSVWGALLLACRIHGEIAA-----NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRED 536
+ V G+LL +C IHG++ L QL+P++T Y +L+SN+YA + K LR+
Sbjct: 420 EVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQV 479
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC- 595
+K +G+KK S I G + F D+ +P +EVY ++ M +++AGY P+ +
Sbjct: 480 LKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQ 539
Query: 596 ------ALHD--VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
+L D VE E++E L HSEKLA+ FG+++ P + + KNLR+C DCHSA
Sbjct: 540 TFAGCDSLEDDLVEQEEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAI 599
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +S IY R+I++RD NRFH F+ G+CSC DYW
Sbjct: 600 KIVSKIYNREIVIRDRNRFHCFKEGSCSCCDYW 632
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 209/449 (46%), Gaps = 50/449 (11%)
Query: 7 STEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQA-LHLGAKIIIKYTTYGEPNTAR 62
S Y LL+SC +SL ++H+++ T+G+ L ++ Y + G AR
Sbjct: 11 SVSRHYRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQAR 70
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F+ I + + W T++ + + E L ++ MRR G+ + T + CA
Sbjct: 71 KVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCAR 130
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
++ G HG +++ G A++DMYAK G + +VF EM + +VSWTV+
Sbjct: 131 LGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVI 190
Query: 183 ITAYEQAEKPEEALILFQKTQQE---------------GLLSDS---------------- 211
+ ++E ++F + + GL +S
Sbjct: 191 LDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELN 250
Query: 212 -VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVF 269
VT+ S+ +A Q GD++ + VH YA+ E ++ + ++V MYA+CG + A F
Sbjct: 251 YVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFF 310
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
M +R+++SWN+ML+G +G AL +F +M + KP+ VT ++SAC++ G
Sbjct: 311 KKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQM-FKEAKPDDVTFTSVLSACSHSGLVD 369
Query: 330 LGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFND--IHPSERNVSSWNV 385
G + G + S I + + ++D+ + G L+ AE + + I P+E + S
Sbjct: 370 QGCFYFGN-LESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGS--- 425
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
L+ +HG L+ +L+E V+ D
Sbjct: 426 LLGSCSIHG----KLQLGEHLLQELVQLD 450
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/707 (33%), Positives = 378/707 (53%), Gaps = 80/707 (11%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-I 106
++ G A + F+++ + + L N M+ A+A + ++ + SG +
Sbjct: 98 LVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSL 157
Query: 107 SSNSYTFPFVLKACAS--NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD-- 162
+ Y+F ++ A N +H ++++G + V AL+ +Y KC +
Sbjct: 158 RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEAS 217
Query: 163 -DGCKVFDEMSVRDLVSWTVM-------------------------------ITAYEQAE 190
D KV DEM +D ++WT M I+ Y Q+
Sbjct: 218 WDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSG 277
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI--CNAFLED--L 246
+A LF++ E + D T SV SA G + ++VHG I F+ + L
Sbjct: 278 MCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAAL 337
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG--------------- 291
+ N++V +Y++ G + A+ +FD M +D++SWN++L+GYI +G
Sbjct: 338 PVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK 397
Query: 292 ----------------QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
+ +AL LF++M+ D KP T ++AC LG+ + GR+ H
Sbjct: 398 NDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLH 457
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+++ + + NA++ MYAKCG ++ A +F + P+ +VS WN +I+ G HGH
Sbjct: 458 AHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFL-VMPNLDSVS-WNAMISALGQHGH 515
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYA 454
GR+ALE F QM+ EG+ PD I+F +IL+AC+HAGL+DEG F M + + P HYA
Sbjct: 516 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPE 509
++D+LGR+G + EA D+IK MP P S+W A+L CR +G++ AA+ LF++ P+
Sbjct: 576 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
H G ++L+SN Y+A+ +W + ++R+ M+++G+KK S IE G I F D +P
Sbjct: 636 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPE 695
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
+EVY+ +E + ++ GY+PD LHD+E ++E++L HSEKLAV FG++ L P A
Sbjct: 696 AQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGA 755
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
V V KNLR+C DCH+A F+S R+I+VRD RFHHF+ G CSC
Sbjct: 756 TVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 181/420 (43%), Gaps = 75/420 (17%)
Query: 150 ALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG- 206
+LV A G+ D FD + + RD V M++A+ +A A+ +F G
Sbjct: 97 SLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGS 156
Query: 207 LLSDSVTIVSVASAVGQLGD------------VLKAQAVHGYAICNAFL----------- 243
L D + ++ SAVGQ+ + VLK+ A ++ NA +
Sbjct: 157 LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEA 216
Query: 244 -------------EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+D ++V Y R G+V AR VF+ ++ + + WN+M++GY+Q+
Sbjct: 217 SWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQS 276
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII--NSNMKIDAT 348
G ++A LF M + + T ++SAC G G+ HG II N +A
Sbjct: 277 GMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAA 336
Query: 349 L--RNAVMDMYAKCGDLDTAENMFNDIHPSE----------------------------- 377
L NA++ +Y+K G + A+ +F+ ++ +
Sbjct: 337 LPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPY 396
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
+N SW V+++GY G AL+ F+QM E VKP T+ ++AC G + GR+
Sbjct: 397 KNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL 456
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
A + + + ++ M + G + +A + + +P DSV W A++ A HG
Sbjct: 457 HAHLVQCGFEASNSAGNALLTMYAKCGAVNDA--RLVFLVMPNLDSVSWNAMISALGQHG 514
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/599 (36%), Positives = 350/599 (58%), Gaps = 29/599 (4%)
Query: 106 ISSNSYT-------FPFVLKACAS-----NSLILEGKVVHGDIIRTGFLS-----DSYVQ 148
I+SNS + F+L+ C S S + K +H IR G + ++
Sbjct: 16 ITSNSSSQNFLDCHLSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLI 75
Query: 149 AALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF-QKTQQEGL 207
ALV + A ++F+++ ++ +W MI + ++E P A+ LF Q +
Sbjct: 76 FALVSLSAP---MSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSI 132
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
L D+ T + AV +L DV + +H + N F +QNS+V MY+ G++ A
Sbjct: 133 LPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQ 192
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
VF++M RD ++WNS++ G+ NG +EAL L+ EM + +P+ T + L+SAC LG+
Sbjct: 193 VFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGA 252
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
LG + H Y++ + + NA++D+Y+KCG+ A+ +F+++ ER+V SW LI
Sbjct: 253 LALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEM--EERSVVSWTSLI 310
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSV 446
G ++G G +AL+ F ++ +G+KP ITF +L ACSH G++DEG F M + +
Sbjct: 311 VGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGI 370
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAAN 501
P ++H+ CMVD+L RAG + +A+D I+ MP+PPN +W LL AC IHG E+A
Sbjct: 371 LPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARA 430
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
+ +LE H+G FVL+SN+YA+ +W +V +R+ M KG+KK +S++E + F
Sbjct: 431 EIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFI 490
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
DR +P +E Y + + +K+ GY+P L D+E+E++E L++H+EK+A+AF
Sbjct: 491 MGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFM 550
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++N P +++ KNLRVC DCH A + IS ++ R+IIVRD +RFHHF+ G+CSC DYW
Sbjct: 551 LVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 192/376 (51%), Gaps = 6/376 (1%)
Query: 23 ASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-ARSLFNSIHNDKSYSFLWNTM 81
+ L+QIH+ G+ Q +I + P + A +FN I F WNTM
Sbjct: 49 SKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNI--FTWNTM 106
Query: 82 IRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
IR +A + + +EL+S M S I +++TFPF+ KA A + G+ +H ++R G
Sbjct: 107 IRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNG 166
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F S +VQ +LV MY+ G +VF+ MS RD V+W +I + P EAL L++
Sbjct: 167 FDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYR 226
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ EG+ D T+VS+ SA +LG + + VH Y + +++ N+++ +Y++CG
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
N A+ VFD ME+R ++SW S++ G NG +EAL LF E++ KP+ +T + ++
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERN 379
AC++ G G + + + + M D+ + G + A + ++ P N
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNM-PVPPN 405
Query: 380 VSSWNVLIAGYGMHGH 395
W L+ +HGH
Sbjct: 406 AVIWRTLLGACTIHGH 421
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 348/581 (59%), Gaps = 15/581 (2%)
Query: 16 LKSCNFLASLRQIHSSLT-TSGLINQALHLGAKI--IIKYTTYGEPNTARSLFNSIHNDK 72
L++C + L+QIH+S+ T + L + ++ + + +P A SL +
Sbjct: 29 LQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPN 88
Query: 73 SYSFLWNTMIRAYA-NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
L+N +IR A +N +E L +Y M GI ++YT PFVLKACA + + EG+
Sbjct: 89 LP--LYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEE 146
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VHG I+ G SD YV L+ MYA C KVFD RDLVSWT MI Y +
Sbjct: 147 VHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGF 206
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQN 250
E + LF + E L +D +T+V V S+ +LGD+ + +H Y I N+ + D+ + N
Sbjct: 207 AREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGN 266
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MY +CG+ AR VF M ++++SWNSM++G Q GQ E+L +F +MQ KP
Sbjct: 267 ALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKP 326
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ VT + ++++C LG +LG+ H Y+ + ++ D + NA++DMYAKCG +D A +F
Sbjct: 327 DDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVF 386
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
++ ++V S+ +I G MHG G KAL+ FS+M + G++PD +TF +L+ACSH GL
Sbjct: 387 QAMN--RKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGL 444
Query: 431 IDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++EGRK F DM+ + +++P+++HY CMVD+LGRAG + EA + I+ MP+ P+ V GALL
Sbjct: 445 VEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALL 504
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
AC+IHG++ + ++EP G +VLMSNIY+++N+WR+ KLR+ MK + L+K
Sbjct: 505 GACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEK 564
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
S IE I F D+ +P KE+YK ++ + +K
Sbjct: 565 TPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK 605
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 201/385 (52%), Gaps = 9/385 (2%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C ++R+ +H GL + +++ ++ Y +AR +F++
Sbjct: 131 VLKACAESRAVREGEEVHGQAIKMGLASD-VYVSNTLMRMYAVCDVIRSARKVFDTSPQR 189
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W TMI+ Y G E + L+ M + ++ T VL +CA + G+
Sbjct: 190 DLVS--WTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRK 247
Query: 132 VHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+H IIR ++ D +V ALVDMY KCG + KVF EM V+++VSW MI+ Q
Sbjct: 248 LHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKG 307
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+ +E+L +F+K Q+ G+ D VT+V+V ++ LG + + VH Y N D I N
Sbjct: 308 QFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGN 367
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MYA+CG++++A VF M ++D+ S+ +M+ G +GQ +AL LF EM +P
Sbjct: 368 ALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEP 427
Query: 311 NPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ VT + +++AC+++G + GRK F N++ ++D+ + G ++ AE
Sbjct: 428 DEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEF 487
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHG 394
++ P E + L+ +HG
Sbjct: 488 IRNM-PIEPDAFVLGALLGACKIHG 511
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 241/666 (36%), Positives = 378/666 (56%), Gaps = 16/666 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++H+ + +GL + + +G ++ Y G A S+F + S S WN++I
Sbjct: 879 REVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVS--WNSLISGL 936
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
N + E + MRR+G +++T L +CAS I+ G+ +H D ++ G +D
Sbjct: 937 DQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 996
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP-EEALILFQKTQQ 204
V AL+ +YA+ G + KVF M D VSW +I A +E +A+ F + +
Sbjct: 997 SVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMR 1056
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G VT +++ SAV L + +H + +D I N++++ Y +CG + +
Sbjct: 1057 GGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNE 1116
Query: 265 ARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+F M E RD +SWNSM++GYI N +A+ L M + + T ++SAC
Sbjct: 1117 CEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACA 1176
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ + + G + H I + M+ D + +A++DMY+KCG +D A F ++ P RNV SW
Sbjct: 1177 SVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFF-ELMPL-RNVYSW 1234
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHIT-FTSILSACSHAGLIDEGRKCFADMT 442
N +I+GY HGHG KAL+ F++M+ +G PDH+ +LSACSH G ++EG + F M+
Sbjct: 1235 NSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMS 1294
Query: 443 KL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC-RIHGE--- 497
++ + P V+H++CMVD+LGRAG L E D I MP+ PN +W +L AC R +G
Sbjct: 1295 EVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTE 1354
Query: 498 ---IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
AA L +LEP++ +VL++N+YA+ KW +V K R MK +KK A S +
Sbjct: 1355 LGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMK 1414
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+ F D+++P +Y K+ + +++ AGY+P AL D+E E++E +L+YHSE
Sbjct: 1415 DGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSE 1474
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
K+AVAF ++ +++ KNLRVC DCHSAF +IS I R+I++RD+NRFHHFE G C
Sbjct: 1475 KIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKC 1533
Query: 675 SCNDYW 680
SC DYW
Sbjct: 1534 SCGDYW 1539
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 208/458 (45%), Gaps = 41/458 (8%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
+T P LF ++ ++ L + + + HC TL S+S
Sbjct: 497 FTASPFPPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTL-----------FSSSE 545
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TF ++ + E + +H I+ GF+ + ++ L+++Y + G K+FDEM
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV---GQLGDVL 228
S R+LV+W +I+ Y Q KP+EA F+ + G + + S A G G L
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSMLTGY 287
Q +HG + D+ + N +++MY C + AR VFD + R+ ISWNS+++ Y
Sbjct: 666 GVQ-IHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVY 724
Query: 288 IQNGQASEALLLFDEMQNSDC----KPNPVT-ALILVSACTYLGSRQLG----RKFHGYI 338
+ G A LF MQ KPN T ++ +AC+ S G + +
Sbjct: 725 SRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACS---SVDFGLCVLEQMLARV 781
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
S D + +A++ +A+ G D A+N+F + RNV S N L+ G G
Sbjct: 782 EKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQM--GVRNVVSMNGLMVGLVKQKQGEA 839
Query: 399 ALEFFSQMLE-EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP-----EVKH 452
A + F +M + G+ D ++ +LSA S +++EGR+ ++ ++ +V
Sbjct: 840 AAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAI 897
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALL 489
+V+M ++G + +A + + M DSV W +L+
Sbjct: 898 GNGLVNMYAKSGAIADACSVFELM--VEKDSVSWNSLI 933
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/662 (34%), Positives = 375/662 (56%), Gaps = 16/662 (2%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+HS + G + A +GA +I Y+ G ++ARS+F I +W ++ Y
Sbjct: 168 LHSPIVKLGYDSNAF-VGAALINAYSVCGSVDSARSVFEGILCKDI--VVWAGIVSCYVE 224
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
NG ++L+L S M G N+YTF LKA K VHG I++T + D V
Sbjct: 225 NGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRV 284
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
L+ +Y + G D KVF+EM D+V W+ MI + Q +A+ +F + ++ +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFV 344
Query: 208 LSDSVTIVSV--ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ + T+ S+ A+G+ + + +HG + F D+ + N+++ +YA+C ++ A
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTA 402
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+F + ++++SWN+++ GY G+ +AL +F E + VT + AC L
Sbjct: 403 VKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASL 462
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
S +LG + HG I +N + N+++DMYAKCGD+ A+ +FN++ + V+SWN
Sbjct: 463 ASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETID--VASWNA 520
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KL 444
LI+GY HG GR+AL F M KP+ +TF +LS CS+AGLID+G+ CF M
Sbjct: 521 LISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDH 580
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC--RIHGEIA--- 499
++P ++HY CMV + GR+G L +A ++I+ +P P+ +W A+L A + + E A
Sbjct: 581 GIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRS 640
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A + ++ P+ +VL+SN+YA + +W V +R+ MK KG+KK S IE+ D+
Sbjct: 641 AEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHF 700
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F +P K + +E + ++ AGY+PD + L D++DE+++ L HSE+LA+A
Sbjct: 701 FSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALA 760
Query: 620 FGIMNL-TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
+G++ + + + + KNLR+C+DCHSA + IS I +R +++RD NRFHHF G CSC+D
Sbjct: 761 YGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDD 820
Query: 679 YW 680
+W
Sbjct: 821 HW 822
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 233/490 (47%), Gaps = 17/490 (3%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIII--KYTTYGEPNTARSLFN 66
Y +L+ C N S + IH + G L L A I+ Y G A +LF+
Sbjct: 52 YGTMLRRCIRKNDSVSAKAIHCDILKKG---SCLDLFATNILLNAYVKAGFDKDALNLFD 108
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ + S++ T+ + YA C + + LYS + R G N + F LK S
Sbjct: 109 EMPERNNVSYV--TLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+H I++ G+ S+++V AAL++ Y+ CG D VF+ + +D+V W +++ Y
Sbjct: 163 EICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCY 222
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ E++L L + +G + ++ T + A LG A++VHG + + D
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ ++ +Y + G++ A VF+ M K D++ W+ M+ + QNG ++A+ +F M+
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREG 342
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
PN T +++ C LG + HG ++ +D + NA++D+YAKC +DTA
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTA 402
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F ++ S +NV SWN +I GY G G KAL F + L V +TF+S L AC+
Sbjct: 403 VKLFAEL--SSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACA 460
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
++ G + K + V ++DM + G + A + +M S W
Sbjct: 461 SLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVAS-WN 519
Query: 487 ALLLACRIHG 496
AL+ HG
Sbjct: 520 ALISGYSTHG 529
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 177/389 (45%), Gaps = 7/389 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
+S+ + +L+ C + + K +H DI++ G D + L++ Y K G D +F
Sbjct: 48 DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
DEM R+ VS+ + Y ++ + L+ + +EG + S L
Sbjct: 108 DEMPERNNVSYVTLTQGY----ACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+H + + + + +++ Y+ CG+V+ AR VF+ + +D++ W +++ Y+
Sbjct: 164 ICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYV 223
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
+NG ++L L M PN T + A LG+ + HG I+ + ++D
Sbjct: 224 ENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPR 283
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ ++ +Y + GD+ A +FN++ + +V W+ +IA + +G KA++ F +M E
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEM--PKNDVVPWSFMIARFCQNGFCNKAVDIFIRMRE 341
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
V P+ T +SIL+ C+ G + + K+ +V ++D+ + +
Sbjct: 342 GFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIHGE 497
A + ++ N W +++ GE
Sbjct: 402 AVKLFAELS-SKNVVSWNTVIVGYENLGE 429
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/663 (34%), Positives = 370/663 (55%), Gaps = 19/663 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ + +G A +I Y A ++F+S+ S + WN MI YA
Sbjct: 226 QVHAMIVKNGFEFTTFVCNA-LICMYLKSEMVGDAEAVFDSMVVRDSVT--WNIMIGGYA 282
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
G +E +++ MR +G+ + F LK C+ + K +H +++ G+
Sbjct: 283 AIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD 342
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL+ Y+KC D+ K+F + ++V+WT MI + Q E+A+ LF + +E
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSRE 402
Query: 206 GLLSDSVTIVSV-ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G+ + T +V A L L AQ + Y + + + +++ Y + GNV +
Sbjct: 403 GVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAY-----YEKVPSVATALLDAYVKTGNVVE 457
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
+ VF + +D+++W++MLTG Q + +A+ +F ++ KPN T +++AC+
Sbjct: 458 SARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSS 517
Query: 325 -LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ + G++ H + S + +A++ MY+K G++++AE +F ER++ SW
Sbjct: 518 SAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFT--RQEERDIVSW 575
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I GYG HG +KALE F M +G+ D +TF +L+AC+HAGL++EG K F M K
Sbjct: 576 NSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GE 497
+ +++HY+CMVD+ RAG +A D+I MP P + ++W LL ACR+H G+
Sbjct: 636 DYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGK 695
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+AA L L+P +VL+SNI+A + W E +R+ M + +KK A S IE I
Sbjct: 696 LAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRI 755
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D +P+ VY K+E +++++K GY PD + HDVE+E +E +L+ HSE+LA
Sbjct: 756 FSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLA 815
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+A+G++ L P A +Q+ KNLR+C DCH+ IS I R +IVRD+NRFHHF+GG CSC
Sbjct: 816 IAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCG 875
Query: 678 DYW 680
YW
Sbjct: 876 GYW 878
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 213/456 (46%), Gaps = 14/456 (3%)
Query: 58 PNTARSLFNSIH-NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
P A LF+ D S+ +N ++ ++ N H E L L+ + SG+ + T
Sbjct: 54 PRYAHQLFDETPLKDISH---YNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCA 110
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
LK C + G+ VH +++GFL D V +LVDMY K +DG +FDEM ++++
Sbjct: 111 LKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT +++ Y + +E + L + Q EG+ + T +V A+ + VH
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ N F + N+++ MY + V A VFD M RD ++WN M+ GY G E
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
+F M+ + K + + C+ ++ H ++ + + +R A+M
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y+KC +D A +F+ + + NV +W +I G+ + + KA++ F QM EGV+P+H
Sbjct: 351 YSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHF 409
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
T++++L+ + L + A + K + ++D + G + E+ +
Sbjct: 410 TYSTVLAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVF--Y 463
Query: 477 PLPPNDSV-WGALL--LACRIHGEIAANYLFQLEPE 509
+P D V W A+L LA E A QL E
Sbjct: 464 SIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/599 (36%), Positives = 349/599 (58%), Gaps = 29/599 (4%)
Query: 106 ISSNSYT-------FPFVLKACAS-----NSLILEGKVVHGDIIRTGFLS-----DSYVQ 148
I+SNS + F+L+ C S S + K +H IR G + ++
Sbjct: 16 ITSNSSSQNFLDCHLSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLI 75
Query: 149 AALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF-QKTQQEGL 207
ALV + A ++F+++ ++ +W MI + ++E P A+ LF Q +
Sbjct: 76 FALVSLSAP---MSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSI 132
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
L D+ T + AV +L DV + +H + N F +QNS+V MY+ G E A
Sbjct: 133 LPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQ 192
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
VF++M RD ++WNS++ G+ NG +EAL L+ EM + +P+ T + L+SAC LG+
Sbjct: 193 VFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGA 252
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
LG + H Y++ + + NA++D+Y+KCG+ A+ +F+++ ER+V SW LI
Sbjct: 253 LALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEM--EERSVVSWTSLI 310
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSV 446
G ++G G +AL+ F ++ +G+KP ITF +L ACSH G++DEG F M + +
Sbjct: 311 VGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGI 370
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAAN 501
P ++H+ CMVD+L RAG + +A+D I+ MP+PPN +W LL AC IHG E+A
Sbjct: 371 LPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARA 430
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
+ +LE H+G FVL+SN+YA+ +W +V +R+ M KG+KK +S++E + F
Sbjct: 431 EIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFI 490
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
DR +P +E Y + + +K+ GY+P L D+E+E++E L++H+EK+A+AF
Sbjct: 491 MGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFM 550
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++N P +++ KNLRVC DCH A + IS ++ R+IIVRD +RFHHF+ G+CSC DYW
Sbjct: 551 LVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 193/376 (51%), Gaps = 6/376 (1%)
Query: 23 ASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-ARSLFNSIHNDKSYSFLWNTM 81
+ L+QIH+ G+ Q +I + P + A +FN I F WNTM
Sbjct: 49 SKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNI--FTWNTM 106
Query: 82 IRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
IR +A + + +EL+S M S I +++TFPF+ KA A + G+ +H ++R G
Sbjct: 107 IRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNG 166
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F S +VQ +LV MY+ G + +VF+ MS RD V+W +I + P EAL L++
Sbjct: 167 FDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYR 226
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ EG+ D T+VS+ SA +LG + + VH Y + +++ N+++ +Y++CG
Sbjct: 227 EMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCG 286
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
N A+ VFD ME+R ++SW S++ G NG +EAL LF E++ KP+ +T + ++
Sbjct: 287 NFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLY 346
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERN 379
AC++ G G + + + + M D+ + G + A + ++ P N
Sbjct: 347 ACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNM-PVPPN 405
Query: 380 VSSWNVLIAGYGMHGH 395
W L+ +HGH
Sbjct: 406 AVIWRTLLGACTIHGH 421
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 328/537 (61%), Gaps = 50/537 (9%)
Query: 154 MYAKC---GQTDDGCKVFDEMSVRDLVSWTVMITAYEQA-EKPEEALILFQKTQQEGLLS 209
MYAKC G DD KVF++M +++SWT +ITAY Q+ E +EA+ LF K ++S
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK-----MIS 55
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
SV C+ NS+++MYAR G +E AR F
Sbjct: 56 ASVN---------------------------------CVGNSLISMYARSGRMEDARKAF 82
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D++ +++L+S+N+++ GY +N ++ EA LLF+E+ ++ + T L+S +G+
Sbjct: 83 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G + HG ++ K + + NA++ MY++CG+++ A +FN++ +RNV SW +I G
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM--EDRNVISWTSMITG 200
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKP 448
+ HG +ALE F +MLE G KP+ IT+ ++LSACSH G+I EG+K F M K + P
Sbjct: 201 FAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVP 260
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYL 503
++HYACMVD+LGR+G L EA + I MPL + VW LL ACR+HG AA +
Sbjct: 261 RMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMI 320
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA 563
+ EP+ ++L+SN++A++ +W++V K+R+ MK + L K A S IE + FH
Sbjct: 321 LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVG 380
Query: 564 DRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIM 623
+ +P ++Y++++ +A +IK GY+PD LHD+E+E +E L HSEK+AVAFG++
Sbjct: 381 ETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLI 440
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ + +++ KNLRVC DCH+A ++IS R+I+VRD+NRFHH + G CSCNDYW
Sbjct: 441 STSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 177/366 (48%), Gaps = 55/366 (15%)
Query: 56 GEPNTARSLFNSI--HNDKSYSFLWNTMIRAYANNGHC-VETLELYSTMRRSGISSNSYT 112
G + +R +F + HN S W +I AY +G C E +EL+ M + ++
Sbjct: 9 GSVDDSRKVFEQMPEHNVMS----WTAIITAYVQSGECDKEAIELFCKMISASVN----- 59
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
C NSLI MYA+ G+ +D K FD +
Sbjct: 60 -------CVGNSLI--------------------------SMYARSGRMEDARKAFDILF 86
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
++LVS+ ++ Y + K EEA +LF + G+ + T S+ S +G + K +
Sbjct: 87 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 146
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
+HG + + + CI N++++MY+RCGN+E A VF+ ME R++ISW SM+TG+ ++G
Sbjct: 147 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF 206
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
A+ AL +F +M + KPN +T + ++SAC+++G G+K + + + A
Sbjct: 207 ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA 266
Query: 353 VM-DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLE 408
M D+ + G L A N + P + W L+ +HG+ GR A E +LE
Sbjct: 267 CMVDLLGRSGLLVEAMEFINSM-PLMADALVWRTLLGACRVHGNTELGRHAAEM---ILE 322
Query: 409 EGVKPD 414
+ +PD
Sbjct: 323 Q--EPD 326
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G +I Y G AR F+ + S+ N ++ YA N E L++ +
Sbjct: 61 VGNSLISMYARSGRMEDARKAFDILFEKNLVSY--NAIVDGYAKNLKSEEAFLLFNEIAD 118
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+GI +++TF +L AS + +G+ +HG +++ G+ S+ + AL+ MY++CG +
Sbjct: 119 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 178
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
+VF+EM R+++SWT MIT + + AL +F K + G + +T V+V SA
Sbjct: 179 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 238
Query: 224 LGDVLKAQ 231
+G + + Q
Sbjct: 239 VGMISEGQ 246
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 322/551 (58%), Gaps = 39/551 (7%)
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+F + ++ W + ++ + + P +A+ LF + ++ + D T V A +L D
Sbjct: 69 IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN----- 281
V + VHGY ++ +QN IV +YA CG + AR VFD M +RD+I+WN
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 282 --------------------------SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
SM+ GY Q G++ EA+ LF EM+++ PN VT
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ ++ AC +G+ LGR+ H + S + + + N ++DMY KCG L+ A +F+++
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNM-- 306
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
ER V SW+ +IAG HG AL F++M+ GVKP+ +TF IL ACSH G++++GR
Sbjct: 307 EERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGR 366
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
K FA MT+ + P ++HY CMVD+ RAG L EA + I MP+ PN VWGALL C++
Sbjct: 367 KYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKV 426
Query: 495 HGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H I A +L +L+P + GY+V++SNIYA + +W +V ++R+ M+++G+KK +S
Sbjct: 427 HKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWS 486
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
I + F D +P +E+++ E + +K+ GY+P+ S L D+E++ +E L
Sbjct: 487 SIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFL 546
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLAV FG++ TP V+++ KNLRVC DCH+A + IS + R+I+VRD NRFH F
Sbjct: 547 YRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCF 606
Query: 670 EGGTCSCNDYW 680
+ G+CSC DYW
Sbjct: 607 KNGSCSCGDYW 617
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 213/411 (51%), Gaps = 40/411 (9%)
Query: 25 LRQIHSSL--TTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMI 82
L+Q+H+ L T S L + L A + +++ + A+ +F + D S WNT +
Sbjct: 31 LKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSF---SYAKLIFQLL--DASEVTHWNTCL 85
Query: 83 RAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL 142
R++A + + L+ +R IS + YT FVLKAC+ + GK+VHG + + G
Sbjct: 86 RSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQ 145
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV------------------------- 177
S+ ++Q +V +YA CG+ KVFD+M RD++
Sbjct: 146 SNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEM 205
Query: 178 ------SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
SWT MI Y Q K +EA+ LF + + GLL + VT+V+V A +G+++ +
Sbjct: 206 PERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGR 265
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+H ++ + + +++ + N+++ MY +CG +E A +FD ME+R ++SW++M+ G +G
Sbjct: 266 RIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHG 325
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+A +AL LF++M N+ KPN VT + ++ AC+++G + GRK+ + +
Sbjct: 326 RAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHY 385
Query: 352 AVM-DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
M D++++ G L A ++ P N W L+ G +H + + A E
Sbjct: 386 GCMVDLFSRAGLLQEAHEFIMNM-PIAPNGVVWGALLGGCKVHKNIKLAEE 435
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/680 (34%), Positives = 376/680 (55%), Gaps = 18/680 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI----IIKYTTYGEPNTARSLFNS 67
Y LL CN L ++++ + + ++ HL ++ + Y G ++AR LF
Sbjct: 143 YITLLTGCNDLEVAKELYQA--HAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLE 200
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ S SF N MI YANNG E +EL+ M+ G + +TF V+ A
Sbjct: 201 MCGWDSVSF--NVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTA 258
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +HG +++T F+ + +V A +D Y+K ++ K+F+EM D VS+ V+ITAY
Sbjct: 259 FGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
K +E++ LFQ+ Q + ++ S D+ + +H + + D
Sbjct: 319 WVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFR 378
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ NS+V MYA+CG E+A +F + R + W +M++ +Q G L LF EM+ ++
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRAN 438
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+ T ++ A L S LG++ H +I S ++ A++DMYA C + A
Sbjct: 439 VSADQATFACVLKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAI 497
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
F ++ SERNV +WN L++ Y +G G+ L+ F +M+ G +PD ++F IL+ACSH
Sbjct: 498 KTFEEM--SERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSH 555
Query: 428 AGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
L++EG K F DM+ + ++ P+ +HY MVD L R+G EA ++ QMP P++ VW
Sbjct: 556 CRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWT 615
Query: 487 ALLLACRIH-----GEIAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
++L +CRIH AA LF ++ +V MSNI+A + +W V K+++ M+++
Sbjct: 616 SVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDR 675
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G++K A+S +E + F D +P E+ +K+E +A +++ GY PD+SCA +V
Sbjct: 676 GVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNV 735
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+ E + L YHSE+LA+AF ++N + + V KNLR C DCH+A + IS I R+I V
Sbjct: 736 DKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITV 795
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD+NRFHHF G+CSC DYW
Sbjct: 796 RDSNRFHHFRDGSCSCGDYW 815
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 213/452 (47%), Gaps = 10/452 (2%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
II Y G AR +F+ D+ W TMI AY+ + + +L++ M RSG
Sbjct: 80 IISGYVKSGNLTVARRIFDD--TDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQ 137
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ T+ +L C + E H I++ G + V L+D Y K G D ++
Sbjct: 138 PDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRL 197
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F EM D VS+ VMIT Y EEA+ LF + Q G T +V SA L D
Sbjct: 198 FLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDT 257
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
Q +HG+ + +F+ ++ + N+ + Y++ V + R +F+ M + D +S+N ++T Y
Sbjct: 258 AFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAY 317
Query: 288 IQNGQASEALLLFDEMQNS--DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
G+ E++ LF E+Q + D K P ++ ++A + Q+GR+ H ++ S
Sbjct: 318 AWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSL--DLQMGRQLHAQVVVSMADP 375
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + N+++DMYAKCG + A+ +F + S R+ W +I+ G L+ F +
Sbjct: 376 DFRVSNSLVDMYAKCGKFEEADRIF--LRLSSRSTVPWTAMISANVQRGLHENGLKLFYE 433
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M V D TF +L A ++ I G++ + + + S V ++DM
Sbjct: 434 MRRANVSADQATFACVLKASANLASILLGKQLHSCVIR-SGFMNVYSGCALLDMYANCAS 492
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ +A ++M N W ALL A +G+
Sbjct: 493 IKDAIKTFEEMS-ERNVVTWNALLSAYAQNGD 523
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 37/251 (14%)
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS------------------------- 294
G + +AR + D M R+ S + +++GY+++G +
Sbjct: 57 GQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYS 116
Query: 295 ------EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
+A LF EM S +P+ VT + L++ C L + + H I+ ++
Sbjct: 117 KSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHR 176
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ N ++D Y K G LD+A +F + + S+NV+I GY +G +A+E F +M
Sbjct: 177 VCNTLLDSYFKTGGLDSARRLF--LEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQN 234
Query: 409 EGVKPDHITFTSILSACSHAGLIDE--GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
G KP TF +++SA GL D G++ + K S V +D + C+
Sbjct: 235 LGFKPSDFTFAAVISAS--VGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCV 292
Query: 467 YEAFDMIKQMP 477
E + +MP
Sbjct: 293 NEVRKLFNEMP 303
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/490 (41%), Positives = 316/490 (64%), Gaps = 19/490 (3%)
Query: 207 LLSDSVTIVSVA------SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ SDS ++V A SA ++ D ++H F + + N+++ YA+ G
Sbjct: 188 IASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGG 247
Query: 261 --NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN--SDCKPNPVTAL 316
++E AR VFD ME RD++SWNSM+ Y QNG ++EA+ L+ +M N K N V
Sbjct: 248 SRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALS 306
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC + G+ Q G++ H ++ ++ + + +++DMY+KCG ++ A F I
Sbjct: 307 AVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKI--K 364
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
E+N+ SW+ +I GYGMHG G++ALE F++M G++P++ITF S+L+ACSHAGL+DEGR
Sbjct: 365 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 424
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
+ M + ++ V+HY CMVD+LGRAGCL EA+ +IK+M + P+ ++WGALL ACRIH
Sbjct: 425 WYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH 484
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
E++ LF+L+ ++GY+VL+SNIYA + W++V ++R +K + ++KP +S
Sbjct: 485 KNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSS 544
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
E I F+ D+ +P E+Y +E + ++ AGY+P+ LHD+++E++E L
Sbjct: 545 FELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALR 604
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSEKLAVAF +MN P +V+ + KNLRVC+DCH+A +FI+ I R+II+RD RFHHF+
Sbjct: 605 IHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFK 664
Query: 671 GGTCSCNDYW 680
G CSC DYW
Sbjct: 665 DGLCSCRDYW 674
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 174/340 (51%), Gaps = 22/340 (6%)
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTF---PFVLKACAS 122
S+ S S LW+ Y N +LEL+ M I+S+S + L A ++
Sbjct: 155 KSLTPTPSSSPLWHF---GYVRNNLVYHSLELFRAM----IASDSASVVDEAAALVAFSA 207
Query: 123 NSLILEGKV---VHGDIIRTGFLSDSYVQAALVDMYAKCGQTD--DGCKVFDEMSVRDLV 177
++ + + V +H I + GF ++ V ++D YAK G D KVFD M RD+V
Sbjct: 208 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME-RDVV 266
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQ--EGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
SW MI Y Q EA+ L+ K G+ ++V + +V A G + + +H
Sbjct: 267 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHN 326
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ E++ + SIV MY++CG VE A F +++++++SW++M+TGY +G+ E
Sbjct: 327 QVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQE 386
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AV 353
AL +F EM+ S +PN +T + +++AC++ G GR ++ + I+A + + +
Sbjct: 387 ALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYN-AMKQEFGIEAGVEHYGCM 445
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+D+ + G LD A ++ ++ + + + W L++ +H
Sbjct: 446 VDLLGRAGCLDEAYSLIKEMK-VKPDAAIWGALLSACRIH 484
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 250/770 (32%), Positives = 394/770 (51%), Gaps = 128/770 (16%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY----------- 74
R +H ++ T G +A H+ ++I Y E N AR LF+ I
Sbjct: 34 RAVHGNIITFGFQPRA-HILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 75 --------------------SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
+ ++N MI +++N + L+ M+ G +++TF
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 115 FVLKACASNSLILEGK----VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD----GCK 166
VL A L+ + + H +++G + V ALV +Y+KC + K
Sbjct: 153 SVLAGLA---LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 167 VFDEMSVRDLVSWTVMITAY------EQAEKP--------------------------EE 194
VFDE+ +D SWT M+T Y + E+ +E
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ--NSI 252
AL + ++ G+ D T SV A G + + VH Y + ED NS+
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR---EDFSFHFDNSL 326
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V++Y +CG ++AR +F+ M +DL+SWN++L+GY+ +G EA L+F EM+ + N
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK----EKNI 382
Query: 313 VTALILVS-----------------------------------ACTYLGSRQLGRKFHGY 337
++ +I++S +C LG+ G+++H
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
++ + NA++ MYAKCG ++ A +F + P +VS WN LIA G HGHG
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM-PCLDSVS-WNALIAALGQHGHGA 500
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACM 456
+A++ + +ML++G++PD IT ++L+ACSHAGL+D+GRK F M T + P HYA +
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-----IAANYLFQLEPEHT 511
+D+L R+G +A +I+ +P P +W ALL CR+HG IAA+ LF L PEH
Sbjct: 561 IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G ++L+SN++AA+ +W EV ++R+ M+++G+KK A S IE + F D +P +
Sbjct: 621 GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAE 680
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVE-DEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
VY ++ + E++ GY+PD S LHDVE D +E ML HSEK+AVAFG+M L P
Sbjct: 681 AVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTT 740
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLR C DCH+ FRF+S++ +R II+RD RFHHF G CSC ++W
Sbjct: 741 IRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 163/390 (41%), Gaps = 84/390 (21%)
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
A+AVHG I F I N ++ +Y + + AR +FD + + D I+ +M++GY
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 290 NGQAS---------------------------------EALLLFDEMQNSDCKPNPVT-A 315
+G + A+ LF +M++ KP+ T A
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD----LDTAENMFN 371
+L + +FH + S ++ NA++ +Y+KC L +A +F+
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 372 DIHPSERNVSSW--------------------------------NVLIAGYGMHGHGRKA 399
+I E++ SW N +I+GY G ++A
Sbjct: 213 EI--LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY-ACMVD 458
LE +M+ G++ D T+ S++ AC+ AGL+ G++ A + L + H+ +V
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV--LRREDFSFHFDNSLVS 328
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIA-ANYLFQLEPEHT--GYF 514
+ + G EA + ++M P D V W ALL G I A +F+ E +
Sbjct: 329 LYYKCGKFDEARAIFEKM--PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 515 VLMSNIYAASNKWREVG-KLREDMKNKGLK 543
+++S + A N + E G KL MK +G +
Sbjct: 387 IMISGL--AENGFGEEGLKLFSCMKREGFE 414
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 9 EGF------YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
EGF + +KSC L + +Q H+ L G + +L G +I Y G
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF-DSSLSAGNALITMYAKCGVVE 469
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
AR +F ++ S S WN +I A +GH E +++Y M + GI + T VL A
Sbjct: 470 EARQVFRTMPCLDSVS--WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 120 CASNSLILEGKVVHGD---IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
C+ L+ +G+ + R +D Y A L+D+ + G+ D V + + +
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESVIESLPFKPT 585
Query: 177 VS-WTVMITA 185
W +++
Sbjct: 586 AEIWEALLSG 595
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 33/142 (23%)
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE--------- 377
S QL R HG II + A + N ++D+Y K +L+ A +F++I +
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 378 ----------------------RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
R+ +N +I G+ + G A+ F +M EG KPD+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 416 ITFTSILSACSHAGLIDEGRKC 437
TF S+L+ A + D+ ++C
Sbjct: 149 FTFASVLAGL--ALVADDEKQC 168
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/639 (34%), Positives = 357/639 (55%), Gaps = 14/639 (2%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNS 110
Y G+ AR+LF+++ S WN ++ Y + G+ +E L L+ M N
Sbjct: 60 YVKCGQLGLARNLFDAMPLRNVVS--WNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNE 117
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
Y F L AC+ + EG HG + + G + YV++ALV MY++C + +V D
Sbjct: 118 YVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDT 177
Query: 171 MS---VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
+ V D+ S+ ++ A ++ + EEA+ + ++ E + D VT V V Q+ D+
Sbjct: 178 VPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDL 237
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
VH + + D + + ++ MY +CG V AR VFD ++ R+++ W +++T Y
Sbjct: 238 QLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAY 297
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
+QNG E+L LF M PN T +L++AC + + + G H + K
Sbjct: 298 LQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHV 357
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+RNA+++MY+K G +D++ N+F D+ R++ +WN +I GY HG G++AL+ F M+
Sbjct: 358 IVRNALINMYSKSGSIDSSYNVFTDM--IYRDIITWNAMICGYSHHGLGKQALQVFQDMV 415
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDMLGRAGCL 466
P+++TF +LSA SH GL+ EG M ++P ++HY CMV +L RAG L
Sbjct: 416 SAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLL 475
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIY 521
EA + +K + + W LL AC +H G A + Q++P G + L+SN+Y
Sbjct: 476 DEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMY 535
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A + +W V +R+ M+ + +KK S ++ DI F + +P ++YKKV+ +
Sbjct: 536 AKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLL 595
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
IK GY+P+++ LHDVEDE +E L+YHSEKLA+A+G+M + A +++ KNLR+C+
Sbjct: 596 ALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCD 655
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH+A + IS + R IIVRDANRFHHF G+C+C D+W
Sbjct: 656 DCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/598 (36%), Positives = 346/598 (57%), Gaps = 38/598 (6%)
Query: 92 VETLELYSTMRRSGISSNSYTFP-FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA 150
+ +L+L S S+ ++ P + L +C S + E K H IIR G +D+
Sbjct: 1 MSSLQLLQASPPSLSSAKAHKLPLYGLDSC---STMAELKQYHSQIIRLGLSADNDAMGR 57
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
++ F +S + W + + ++ + + + +
Sbjct: 58 VIK--------------FCAISKSGYLRWQL----------ARNCIFMYSRMLHKSVSPN 93
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
T + A + + + +H + + F D N+++ MY ++E+AR VFD
Sbjct: 94 KFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFD 153
Query: 271 MMEKRDL--ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
M +RD +SWN+M+ Y+Q+ + EA LFD M+ + + A ++SACT LG+
Sbjct: 154 NMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGAL 213
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ G+ HGYI S +++D+ L V+DMY KCG L+ A +FN++ ++ +SSWN +I
Sbjct: 214 EQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNEL--PQKGISSWNCMIG 271
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVK 447
G MHG G A+E F +M E V PD ITF ++LSAC+H+GL++EG+ F MT+ L +K
Sbjct: 272 GLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLK 331
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANY 502
P ++H+ CMVD+LGRAG L EA +I +MP+ P+ V GAL+ ACRIHG E
Sbjct: 332 PGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKK 391
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
+ +LEP ++G +VL++N+YA++ +W +V K+R+ M ++G+KK FS+IE + F
Sbjct: 392 VIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIA 451
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
R +P KE+Y K++ + I+ GY+PD LHD+++E++E+ L YHSEKLA+AFG+
Sbjct: 452 GGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGL 511
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ P ++++KNLR+C DCH A + IS +Y R+II+RD NRFHHF G CSC DYW
Sbjct: 512 LKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 15/270 (5%)
Query: 12 YDQLLKSCNF---LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y L+++C + +QIH+ + G L +I Y + AR +F+++
Sbjct: 97 YPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLN-NLIHMYVNFQSLEQARRVFDNM 155
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WN MI AY + E L+ MR + + + +L AC + +
Sbjct: 156 PQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 215
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +HG I ++G DS + ++DMY KCG + +VF+E+ + + SW MI
Sbjct: 216 GKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAM 275
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
K E A+ LF++ ++E + D +T V+V SA G V + + Y E L +
Sbjct: 276 HGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQY-----MTEVLGL 330
Query: 249 Q------NSIVAMYARCGNVEKARLVFDMM 272
+ +V + R G +E+AR + + M
Sbjct: 331 KPGMEHFGCMVDLLGRAGLLEEARKLINEM 360
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/630 (36%), Positives = 351/630 (55%), Gaps = 23/630 (3%)
Query: 71 DKSYSFLWNTMIRAYANNGHCV------------ETLELYSTMR--RSGISSNSYTFPFV 116
+++ L +T IR + +G C E +EL+ + G + T+ +
Sbjct: 65 ERNVPVLEDTQIRKTSPSGLCSQIEKLVVCNRHREAMELFEILELEHDGYGVGASTYDAL 124
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ AC I K V +I +GF D YV ++ M+ KCG D K+FDEM +D+
Sbjct: 125 VSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDV 184
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
SW M+ EA LF +E S T ++ A LG V + +H
Sbjct: 185 ASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSC 244
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
A+ +D + +++ MY++CG++E A VFD M ++ + WNS++ Y +G + EA
Sbjct: 245 ALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEA 304
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L L+ EM++S + T I++ C L S + ++ H ++ D A++D
Sbjct: 305 LSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDF 364
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y+K G ++ A ++FN + +NV SWN LIAGYG HG G++A+E F QML+EGV P H+
Sbjct: 365 YSKWGRMEDARHVFNRMR--HKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHV 422
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
TF ++LSACS++GL G + F M + VKP HYACM+++LGR L EA+ +I+
Sbjct: 423 TFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRT 482
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
P P ++W ALL ACR+H G++AA L+ +EPE ++++ N+Y +S K +E
Sbjct: 483 APFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEA 542
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
+ + +K KGL+ A S +E K F D+ + KE+Y+KV+++ VEI GY
Sbjct: 543 AGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYA 602
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
+ L DV DE+ + +L YHSEKLA+AFG++N +Q+T+ RVC DCHSA + I
Sbjct: 603 EENETLLPDV-DEEEQRILKYHSEKLAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLI 661
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ + R+I+VRDA+RFHHF G+CSC DYW
Sbjct: 662 AMVTGREIVVRDASRFHHFRNGSCSCGDYW 691
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 218/456 (47%), Gaps = 28/456 (6%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
+G ST YD L+ +C L S+R ++ + + SG L++ +++ + G
Sbjct: 116 VGAST---YDALVSACVGLRSIRGVKRVFNYMINSGF-EPDLYVMNRVLFMHVKCGLMLD 171
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR LF+ + S W TM+ + G+ E L+ M + S TF +++A
Sbjct: 172 ARKLFDEMPEKDVAS--WMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRAS 229
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A L+ GK +H ++ G D +V AL+DMY+KCG +D VFD+M + V W
Sbjct: 230 AGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWN 289
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I +Y EEAL L+ + + G D TI V +L + A+ H + +
Sbjct: 290 SIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRH 349
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F D+ ++V Y++ G +E AR VF+ M +++ISWN+++ GY +GQ EA+ +F
Sbjct: 350 GFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMF 409
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
++M P VT L ++SAC+Y G Q G+ I +MK D ++ M YA
Sbjct: 410 EQMLQEGVTPTHVTFLAVLSACSYSGLSQ-----RGWEIFYSMKRDHKVKPRAMH-YACM 463
Query: 361 GDLDTAENMFNDIH------PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE--GVK 412
+L E++ ++ + P + + W L+ MH K LE E+ G++
Sbjct: 464 IELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMH----KNLELGKLAAEKLYGME 519
Query: 413 PDHI-TFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
P+ + + +L+ + +G + E + K ++
Sbjct: 520 PEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLR 555
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/675 (33%), Positives = 379/675 (56%), Gaps = 29/675 (4%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++K+C L +L +++H L G + +++ +I Y G A +F+ +
Sbjct: 130 VIKACGELLALMVGQKVHGKLIKIGF-DLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVR 188
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN+M+ Y +G + +L + M R G ++ + L AC+ + G
Sbjct: 189 DLVS--WNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGME 246
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +IR+ D VQ +L+DMY KCG+ D +VF+ + +++V+W MI ++ +K
Sbjct: 247 IHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDK 306
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
++ D +T++++ + Q G +L+ +++HG+AI FL L ++ +
Sbjct: 307 ---------------VIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETA 351
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V MY +CG ++ A VF+ M +++++SWN+M+ Y+QN Q EAL +F + N KP+
Sbjct: 352 LVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPD 411
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T ++ A L SR G++ H YI+ + + + NA++ MYAKCGDL TA F+
Sbjct: 412 AITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFD 471
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ++V SWN +I Y +HG GR +++FFS+M +G KP+ TF S+L+ACS +GLI
Sbjct: 472 GM--VCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLI 529
Query: 432 DEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
DEG F M + + P ++HY CM+D+LGR G L EA I++MPL P +WG+LL
Sbjct: 530 DEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLA 589
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
A R H E+AA ++ L+ ++TG +VL+SN+YA + +W +V +++ MK +GL K
Sbjct: 590 ASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKT 649
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S+++ + F DR + + +Y ++ + +I Y+ L+ + R
Sbjct: 650 VGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAKKR 709
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
+ YHS KLA+ FG+++ V V KN R+C+DCH A + IS + +R+I+V DA
Sbjct: 710 GNSPEYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDAKV 769
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G CSC DYW
Sbjct: 770 FHHFRDGCCSCRDYW 784
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 196/403 (48%), Gaps = 34/403 (8%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M RLG + F L +C+ LR +IH + S L + + +I Y G
Sbjct: 216 MLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSEL-ELDIMVQTSLIDMYGKCG 274
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
+ + A +FN I++ + WN MI + + + T +
Sbjct: 275 KVDYAERVFNRIYSKNIVA--WNAMIGGMQEDDKVIPDV---------------ITMINL 317
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L +C+ + +LEGK +HG IR FL ++ ALVDMY KCG+ VF++M+ +++
Sbjct: 318 LPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNM 377
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW M+ AY Q E+ +EAL +FQ E L D++TI SV AV +L + + +H Y
Sbjct: 378 VSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSY 437
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ + I N+IV MYA+CG+++ AR FD M +D++SWN+M+ Y +G +
Sbjct: 438 IMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTS 497
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV--- 353
+ F EM+ KPN T + L++AC+ G G F ++MK++ + +
Sbjct: 498 IQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFF-----NSMKVEYGIDPGIEHY 552
Query: 354 ---MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+D+ + G+LD A+ ++ P W L+A H
Sbjct: 553 GCMLDLLGRNGNLDEAKCFIEEM-PLVPTARIWGSLLAASRNH 594
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 162/322 (50%), Gaps = 17/322 (5%)
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
+ + G + +F++M+ D W V+I Y +EA+ + + + EG+ SD+ T
Sbjct: 68 FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
V A G+L ++ Q VHG I F D+ + N ++ MY + G +E A VFD M
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
RDL+SWNSM++GY +G +L+ F EM K + + + AC+ + G +
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
H +I S +++D ++ +++DMY KCG +D AE +FN I+ +N+ +WN +I G
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIY--SKNIVAWNAMIGG----- 300
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
++ V PD IT ++L +CS +G + EG+ + P +
Sbjct: 301 ----------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLET 350
Query: 455 CMVDMLGRAGCLYEAFDMIKQM 476
+VDM G+ G L A + QM
Sbjct: 351 ALVDMYGKCGELKLAEHVFNQM 372
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/712 (33%), Positives = 382/712 (53%), Gaps = 72/712 (10%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H+ L +G + G ++ Y A +F I +S W +I +A
Sbjct: 310 LHAKLIKNGCVGIR---GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFS--WTVLISGFAR 364
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN---SLILEGKVVHGDIIRTGFLSD 144
G + L L++ M+ G+ N +T VLK+C+SN S I GK +HG I+R G D
Sbjct: 365 IGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRI--GKGIHGWILRNGLDLD 422
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK--- 201
+ + +++D Y KC K+F M+ +D VSW +M+++Y Q ++++ LF++
Sbjct: 423 AVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPG 482
Query: 202 -------TQQEGLLSD-------------------------SVTIVSVASAVGQLGDVLK 229
T +GL+ + S+ +V +AS++ LG
Sbjct: 483 KDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALV-LASSLSVLG---L 538
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR-------------- 275
+ +H + L+D ++NS++ MY +CG +EKA ++F + +
Sbjct: 539 GKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAV 598
Query: 276 -DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
+ +SW+SM++GY+QNG+ +AL F M S + + T +VSAC G +LGR+
Sbjct: 599 VESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQV 658
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
HGYI +D L ++++DMY KCG L+ A +FN +RNV W +I+G +HG
Sbjct: 659 HGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFN--QAKDRNVVLWTSMISGCALHG 716
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHY 453
GR+A+ F M+ EG+ P+ ++F +L+ACSHAGL++EG K F M ++ ++P +H+
Sbjct: 717 QGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHF 776
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEP 508
CMVD+ GRAG L E + I + SVW + L +CR+H I L +LEP
Sbjct: 777 TCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEP 836
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
G ++L S+I A ++W E K+R M+ +G+KK + S I+ + F DR +P
Sbjct: 837 FDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHP 896
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
++Y ++ + +K GY D++ + DVE E R+ +L YHSEKLA+A+GI++ P
Sbjct: 897 QDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPG 956
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLRVC DCH+ ++ S + R+II+RD +RFHHF+ G CSC DYW
Sbjct: 957 TPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/643 (33%), Positives = 362/643 (56%), Gaps = 10/643 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G+ +I Y+ G + AR +F+ I + + W M+ Y+ N + L +S MR
Sbjct: 187 VGSSLIDAYSLCGAVSHARCVFDGIIWKDAVT--WTAMVSCYSENDIPEDALNTFSKMRM 244
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+G N + VLKA S + GK +HG ++T ++ +V AL+DMYAKCG +D
Sbjct: 245 AGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIED 304
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
VF+ + D++ W+ +I+ Y Q+ + E+A +F + + ++ + ++ V A
Sbjct: 305 ARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACAN 364
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ + Q +H I + +L + N+++ +YA+C N+E + +F + + +SWN++
Sbjct: 365 VAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTI 424
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ GY Q+G A +AL +F EM+ + VT ++ AC S + + H I S
Sbjct: 425 IVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTF 484
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
D + N+++D YAKCG + A +F I + +V SWN +I+GY +HG ALE F
Sbjct: 485 NNDTIVCNSLIDTYAKCGCIRDALKVFESI--IQCDVVSWNAIISGYALHGRATDALELF 542
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGR 462
++M + KP+ +TF ++LS C GL+++G F MT +KP + HY C+V +LGR
Sbjct: 543 NRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGR 602
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLM 517
AG L +A I +P P+ VW ALL +C +H G+ +A + ++EP+ +VL+
Sbjct: 603 AGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLL 662
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SN+YAA+ +V LR+ M+N G+KK S +E ++ F +P + + +
Sbjct: 663 SNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAML 722
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
E + ++ GY+PD++ LHDV++E++ ML HSE+LA+A+G+ P +++ KNL
Sbjct: 723 EWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNL 782
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
R C DCH+ F+ IS I +R+I+VRD NRFHHF+ G CSC DYW
Sbjct: 783 RSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 226/473 (47%), Gaps = 6/473 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
R +H+ + G + Q A +++ Y G AR LF+ + SF+ T+++
Sbjct: 67 RAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFV--TLVQG 124
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
YA G E L+ ++R G N + +LK + +H + G +
Sbjct: 125 YALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRN 184
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
++V ++L+D Y+ CG VFD + +D V+WT M++ Y + + PE+AL F K +
Sbjct: 185 AFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRM 244
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G + + SV A L + + +HG A+ + + +++ MYA+CG +E
Sbjct: 245 AGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIED 304
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
AR VF+++ D+I W+ +++ Y Q+ Q +A +F M S PN + ++ AC
Sbjct: 305 ARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACAN 364
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
+ LG++ H +I + + + NA+MD+YAKC +++ + +F + + N SWN
Sbjct: 365 VAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLR--DANEVSWN 422
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
+I GY G AL F +M V +TF+S+L AC++ I + + + K
Sbjct: 423 TIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKS 482
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ + ++D + GC+ +A + + + + + W A++ +HG
Sbjct: 483 TFNNDTIVCNSLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGR 534
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 226/456 (49%), Gaps = 12/456 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MR G F +LK+ L+S + IH + L + H+G ++ Y G
Sbjct: 242 MRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKT-LCDTEPHVGGALLDMYAKCG 300
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
AR++F I +D LW+ +I YA + + E++ M RS + N ++ V
Sbjct: 301 YIEDARTVFEIIPHDDV--ILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGV 358
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L+ACA+ + + G+ +H +I+ G+ S+ +V AL+D+YAKC ++ ++F + +
Sbjct: 359 LQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANE 418
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW +I Y Q+ E+AL +FQ+ + +LS VT SV A + +H
Sbjct: 419 VSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSL 478
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ F D + NS++ YA+CG + A VF+ + + D++SWN++++GY +G+A++A
Sbjct: 479 IEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDA 538
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMD 355
L LF+ M SD KPN VT + L+S C G G F+ ++ +K ++
Sbjct: 539 LELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVR 598
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP-D 414
+ + G L+ A DI PS + W L++ +H + AL FS ++P D
Sbjct: 599 LLGRAGRLNDALKFIGDI-PSTPSPMVWRALLSSCVVHKN--VALGKFSAEKVLEIEPQD 655
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
T+ + + + AG++D+ M + VK EV
Sbjct: 656 ETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEV 691
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 191/385 (49%), Gaps = 5/385 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS--DSYVQAALVDMYAKCGQTDDGCK 166
+SY +L+ C + G+ VH +++ G ++ D++ L+++YAK G +
Sbjct: 46 DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD M R++VS+ ++ Y EEA LF++ Q+EG + + ++ + +
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+H A + + +S++ Y+ CG V AR VFD + +D ++W +M++
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSC 225
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y +N +AL F +M+ + KPNP ++ A L S LG+ HG + + +
Sbjct: 226 YSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTE 285
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ A++DMYAKCG ++ A +F +I P + +V W+ LI+ Y +A E F +M
Sbjct: 286 PHVGGALLDMYAKCGYIEDARTVF-EIIPHD-DVILWSFLISRYAQSYQNEQAFEMFLRM 343
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
+ V P+ + + +L AC++ +D G++ + KL + E+ ++D+ + +
Sbjct: 344 MRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNM 403
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLA 491
+ ++ + + N+ W +++
Sbjct: 404 ENSLEIFRSLR-DANEVSWNTIIVG 427
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/685 (33%), Positives = 387/685 (56%), Gaps = 30/685 (4%)
Query: 20 NFLASLRQIHSSLTTSGLINQALH--------------LGAKIIIKYTTYGEPNTARSLF 65
N L S + + L+ S L+ +A+H L ++ Y+ PN+A+ L
Sbjct: 8 NLLGSFLE-SAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQ-LV 65
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
S+ N ++ W ++I +N L +S MRR + N +TFP V KA AS +
Sbjct: 66 LSLTNPRTV-VTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHM 124
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
+ GK +H ++ G + D +V + DMY+K G + +FDEM R+L +W ++
Sbjct: 125 PVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSN 184
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Q + +A+ F+K +++T + +A + + + +HG+ + + + ED
Sbjct: 185 AVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYRED 244
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMME--KRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ + N ++ Y +CG++ + LVF + +R+++SW S+L +QN + A ++F +
Sbjct: 245 VSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQA 304
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ + +P ++SAC LG +LGR H + + ++ + + +A++D+Y KCG +
Sbjct: 305 RK-EVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSI 363
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE--GVKPDHITFTSI 421
+ AE +F ++ ERN+ +WN +I GY G AL F +M G+ ++T S+
Sbjct: 364 EYAEQVFREM--PERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSV 421
Query: 422 LSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
LSACS AG ++ G + F M + ++P +HYAC+VD+LGR+G + A++ IK+MP+ P
Sbjct: 422 LSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILP 481
Query: 481 NDSVWGALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
SVWGALL AC++HG+ IAA LF+L+P+ +G V+ SN+ A++ +W E +R+
Sbjct: 482 TISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRK 541
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
+M++ G+KK +S + + F D + E+ + + E+K AGY+PD +
Sbjct: 542 EMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANL 601
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
+L D+E+E++ + YHSEK+A+AFG++ L +++TKNLR+C DCHSA +FIS I
Sbjct: 602 SLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVG 661
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R+IIVRD NRFH F+ G CSC DYW
Sbjct: 662 REIIVRDNNRFHRFKDGWCSCKDYW 686
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/665 (35%), Positives = 360/665 (54%), Gaps = 46/665 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGI 106
I+ Y P A+ LF+ + + S WN ++ Y NG E +++ M R+ +
Sbjct: 53 IVAGYFHNKRPAEAQKLFDKMPERNTIS--WNGLVSGYVKNGMISEARKVFDKMPERNVV 110
Query: 107 SSNSYTFPFVLKACASNSLIL-----EGKVVHGDIIRTGFLSDSYVQAA--LVDMYA--- 156
S S +V + + +L E VV ++ G + D V A L DM
Sbjct: 111 SWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKD 170
Query: 157 ------------KCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ--KT 202
G+ + ++FDEM R++V+WT MI+ Y K + A LF+
Sbjct: 171 VVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPD 230
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+ E + + + + + + ++ KA V A CN ++ + G V
Sbjct: 231 KNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNG----------MIMGFGLNGEV 280
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
KAR VFD M+++D +W++++ Y + G EAL LF MQ +PN + + ++S C
Sbjct: 281 GKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVC 340
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
L S GR+ H ++ S+ +D + + ++ MY KCGDL T + +F+ S +++
Sbjct: 341 GSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRF--SSKDIVM 398
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM- 441
WN +IAGY HG G KALE F +M G PD ITF +LSAC + G + EG + F M
Sbjct: 399 WNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMK 458
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
+K V + +HYACMVD+LGRAG L EA ++I+ MP+ + VWGALL ACR H
Sbjct: 459 SKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLA 518
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
EIAA L QLEP G ++L+SN+YA+ ++W++V +LR+ M+ + + K S IE
Sbjct: 519 EIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNK 578
Query: 557 IQGFHTADRVN-PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F + P + + KK+E + ++ AGY PD S +HDV++ED+ H L +HSEK
Sbjct: 579 VHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEK 638
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
+AVA+G++ + ++V KNLRVC DCHSA + I+ + R+II+RDANRFHHF+ G CS
Sbjct: 639 MAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCS 698
Query: 676 CNDYW 680
C D+W
Sbjct: 699 CRDFW 703
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 160/375 (42%), Gaps = 69/375 (18%)
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R+ F S + + + +A+ GQ D +FD++ + + SW ++ Y ++P EA
Sbjct: 9 RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF K + +S N +V+ Y
Sbjct: 69 LFDKMPERNTIS---------------------------------------WNGLVSGYV 89
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+ G + +AR VFD M +R+++SW SM+ GY+Q G EA LLF M + N V+ +
Sbjct: 90 KNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP----EKNVVSWTV 145
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ G R+ I D ++ G L A +F+++ +
Sbjct: 146 MLGGLIEDGRVDEARRLFDMIPVK----DVVASTNMIGGLCSEGRLSEAREIFDEM--PQ 199
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
RNV +W +I+GY M+ A + F M ++ + +T+T++L + +G I+E +
Sbjct: 200 RNVVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAMLKGYTRSGRINEAAEL 255
Query: 438 FADMTKLSVKPEVKHYAC--MVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLAC 492
F M VKP AC M+ G G + +A FD +K+ +D W AL+
Sbjct: 256 FKAMP---VKPVA---ACNGMIMGFGLNGEVGKARWVFDQMKE----KDDGTWSALIKIY 305
Query: 493 RIHG-EIAANYLFQL 506
G E+ A LF L
Sbjct: 306 ERKGFELEALALFSL 320
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 54/345 (15%)
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
F I ++ +AR G +++AR +FD ++ + + SWN+++ GY N + +EA LFD
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
+M N ++ LVS G RK + N+ +++ Y + G
Sbjct: 72 KMPER----NTISWNGLVSGYVKNGMISEARKVFDKMPERNV----VSWTSMVRGYVQEG 123
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGY-----------------------------GM 392
+D AE +F + E+NV SW V++ G G+
Sbjct: 124 LIDEAELLFWRM--PEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGL 181
Query: 393 HGHGR--KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
GR +A E F +M + V + +TS++S + +D RK F M K EV
Sbjct: 182 CSEGRLSEAREIFDEMPQRNV----VAWTSMISGYAMNNKVDVARKLFEVMPD---KNEV 234
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYLF-QLEP 508
+ M+ R+G + EA ++ K MP+ P + G +++ ++GE+ A ++F Q++
Sbjct: 235 T-WTAMLKGYTRSGRINEAAELFKAMPVKPVAACNG-MIMGFGLNGEVGKARWVFDQMKE 292
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK--PAAFSVI 551
+ G + + IY E L M+ +G++ P+ S++
Sbjct: 293 KDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISIL 337
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/581 (35%), Positives = 346/581 (59%), Gaps = 14/581 (2%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TF ++ +C + + +G VH ++ +G D Y+ L++MY G D CKVFDE
Sbjct: 76 TFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDET 135
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV--ASAVGQLG--DV 227
+ + W + A A + E+ L+L+ + G+ S+ T V A V +L +
Sbjct: 136 REKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPL 195
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
K + +H + + + + + + +++ +YAR G V A VF M ++++SW++M+ Y
Sbjct: 196 RKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACY 255
Query: 288 IQNGQASEALLLFDEM--QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+N +AL LF M + D PNP+T + ++ AC L + + G+ H Y++ +
Sbjct: 256 AKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDS 315
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ N ++ MY +CG++ T + +F+ + +R+V SWN LI+ YGMHG G+KA++ F
Sbjct: 316 TLPVLNTLITMYGRCGEISTGQRVFD--YMKKRDVISWNSLISIYGMHGLGKKAIQIFEN 373
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAG 464
M+ GV P +ITF ++L ACSHAGL++E + F M K + P ++HYACMVD+LGRA
Sbjct: 374 MINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRAN 433
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA ++I+ M P +VWG+LL +CRIH E A+ LF+LEP++ G +VL+S+
Sbjct: 434 RLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSH 493
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IYA S W +V ++R+ ++++GL+K + S IE + I + + NP +E+ + +
Sbjct: 494 IYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLIT 553
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ EIK GY+P + +D+++E++E ++ HS KLAVAFG++N + +++++ NLR+
Sbjct: 554 LLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRL 613
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+ +F+S R+I++RD NRFH F+ G CSC DYW
Sbjct: 614 CEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 199/399 (49%), Gaps = 20/399 (5%)
Query: 8 TEGFYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
T+ ++ L+ SC N L+ +H L SGL +Q +L K+I Y G + A +
Sbjct: 73 TKKTFELLINSCIEQNSLSDGVDVHHRLVGSGL-DQDPYLATKLINMYCDLGSVDHACKV 131
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + F+WN + RA A + L LY M GI SN +T+ +VLKAC +
Sbjct: 132 FDETR--EKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSE 189
Query: 125 L----ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
L + +GK +H I+R G+ +V L+D+YA+ G VF M +++VSW+
Sbjct: 190 LSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWS 249
Query: 181 VMITAYEQAEKPEEALILFQKTQQEG--LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
MI Y + E P +AL LFQ E + + +T+VSV A L + + VH Y +
Sbjct: 250 AMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVL 309
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
L + N+++ MY RCG + + VFD M+KRD+ISWNS+++ Y +G +A+
Sbjct: 310 RRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQ 369
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDM 356
+F+ M N P+ +T + ++ AC++ G + + ++N +I + + ++D+
Sbjct: 370 IFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLN-KYRIHPRMEHYACMVDI 428
Query: 357 YAKCGDLDTAENMFN--DIHPSERNVSSWNVLIAGYGMH 393
+ LD A + D P + W L+ +H
Sbjct: 429 LGRANRLDEAIELIQNMDFKPGP---TVWGSLLGSCRIH 464
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 12/235 (5%)
Query: 6 PSTEGFYDQLLKSCNF-------LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP 58
PS Y +LK+C L ++IH+ + G +H+ ++ Y +G
Sbjct: 172 PSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGH-VHVMTTLLDVYARFGYV 230
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISS--NSYTFPFV 116
+ A S+F ++ + S W+ MI YA N ++ LEL+ M + N T V
Sbjct: 231 SYASSVFGAMPDKNIVS--WSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSV 288
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L+ACAS + + GK+VH ++R G S V L+ MY +CG+ G +VFD M RD+
Sbjct: 289 LQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDV 348
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+SW +I+ Y ++A+ +F+ G+ +T ++V A G V +A+
Sbjct: 349 ISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAK 403
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 308 CKPNPV--TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
C+PNP T +L+++C S G H ++ S + D L +++MY G +D
Sbjct: 68 CEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDH 127
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A +F++ E+ + WN + M G L + QM G+ + T+T +L AC
Sbjct: 128 ACKVFDETR--EKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKAC 185
Query: 426 SHAGL----IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
+ L + +G++ A + + + V ++D+ R G + A + MP N
Sbjct: 186 VVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMP-DKN 244
Query: 482 DSVWGALLLACRIHGEIA--ANYLFQL 506
W A ++AC E+ A LFQ+
Sbjct: 245 IVSWSA-MIACYAKNEMPMKALELFQI 270
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/579 (37%), Positives = 328/579 (56%), Gaps = 46/579 (7%)
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
S + + K +H II+T F +Q L D + + W +I
Sbjct: 89 STLEQTKQIHAHIIKTHF--HHALQIPLNDFPSGLSPS---------------AQWNFVI 131
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
T+Y + +P AL ++ + ++ D+ SV A GQ+ + +HG+ +
Sbjct: 132 TSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLD 191
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW----NSMLTGYIQNGQASEALLL 299
D+ + N+++ MY C VE ARLVFD M +RD++SW ++L Y + G A L
Sbjct: 192 RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQL 251
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM-------------KID 346
F+ + V+ +++ C + G K + N+ ++D
Sbjct: 252 FNGLTQKTV----VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKERVEVD 307
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
L A++DMYAKCGD++ A +F I R++ WN +I G+ MHG+G +AL+ F++M
Sbjct: 308 CILNTALVDMYAKCGDINAAGRLF--IEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 365
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGC 465
+GVKP+ ITF +L ACSHAGL+ EG+K F M + P+++HY CMVD+LGRAG
Sbjct: 366 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 425
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNI 520
L EA +MIK MP+ PN VWGAL+ ACR+H GE+AA L ++EPE+ GY VLMSNI
Sbjct: 426 LDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNI 485
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
YAA+N+W + +R+ MK G+KK SVIE + F D+ +P + + + + M
Sbjct: 486 YAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEM 545
Query: 581 AVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVC 640
++ AGY+PD S L ++++E++E L YHSEKLA+AFG+++ P +++ KNLRVC
Sbjct: 546 RRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVC 605
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
NDCH+A + +S IY R IIVRD NRFHHF G CSC DY
Sbjct: 606 NDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 175/396 (44%), Gaps = 63/396 (15%)
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
N + S S WN +I +Y L +Y+ +R+ +++ P VLKAC S
Sbjct: 114 LNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVS 173
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD--------- 175
GK +HG +++ G D +V AL+ MY +C + VFD+M RD
Sbjct: 174 WTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTT 233
Query: 176 --------------------------LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
+VSWT MI ++ + EE LF + Q+E +
Sbjct: 234 ALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFP 293
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS-IVAMYARCGNVEKARLV 268
+ +T+++ +E CI N+ +V MYA+CG++ A +
Sbjct: 294 NEITMLN-----------------------KERVEVDCILNTALVDMYAKCGDINAAGRL 330
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F RD+ WN+++TG+ +G EAL +F EM+ KPN +T + L+ AC++ G
Sbjct: 331 FIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLV 390
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
G+K ++++ + M D+ + G LD A M + P + N W L+
Sbjct: 391 TEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSM-PIKPNTIVWGALV 449
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A +H + + +Q+LE ++P++ + ++S
Sbjct: 450 AACRLHKNPQLGELAATQLLE--IEPENCGYNVLMS 483
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/670 (33%), Positives = 379/670 (56%), Gaps = 12/670 (1%)
Query: 18 SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFL 77
S ++++ +HS +GL + + + ++ Y++ G+ A LF ++ S
Sbjct: 259 SSDYVSYGSGVHSLCLRTGL-HSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLIS-- 315
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WNTMI +Y NG+ ++ L+ + + + TF L AC+S +++G++VH +
Sbjct: 316 WNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTL 375
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ + V +L+ MY KC +D ++F M D+VS ++I +Y E +A+
Sbjct: 376 QLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQ 435
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMY 256
+F ++ + + +TIV++ + D+ +H Y I FL D + NS++ MY
Sbjct: 436 VFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMY 495
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+CG++E + VF + R ++SWN+M+ +Q+G E+L LF +M++ + +
Sbjct: 496 AKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLA 555
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
+S+ L S + G + HG + + D+ + NA MDMY KCG +D M D P+
Sbjct: 556 ECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPD--PA 613
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
R WN LI+GY +G+ ++A E F M+ G PD++TF ++LSACSHAGL+D+G
Sbjct: 614 IRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGID 673
Query: 437 CFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
+ M+ + V P +KH C+VD+LGR G EA I+ MP+ PND +W +LL + R H
Sbjct: 674 YYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTH 733
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
G AA L +L+P +VL+SN+YA S +W +V ++R MK L K A S
Sbjct: 734 KNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSW 793
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
++ K++ F D + + ++Y K++ + ++++ GY+ D S ALHD ++E +E L
Sbjct: 794 LKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGYVADTSSALHDTDEEQKEQNLW 853
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSEKLA+A+G++ + V++ KNLRVC DCH F+ +S ++ R+I++RD RFHHF+
Sbjct: 854 NHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIVLRDPYRFHHFK 913
Query: 671 GGTCSCNDYW 680
GG+CSC+D+W
Sbjct: 914 GGSCSCSDFW 923
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 190/405 (46%), Gaps = 10/405 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV----VH 133
W T I G + MR G+ + + ++ AC EG+ +H
Sbjct: 11 WYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWE---EGRACGAAIH 67
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
+ G + + Y+ AL+ +Y D ++F EM R++VSWT ++ A E
Sbjct: 68 ALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLE 127
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EAL +++ ++E + ++ +V S G L D + V + I + + + NS++
Sbjct: 128 EALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLI 187
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
+M G V A +F ME+RD +SWN++++ Y G S++ +F +M+ +
Sbjct: 188 SMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDA 247
Query: 314 TALI-LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T L L+S C G H + + + + NA+++MY+ G L AE +F +
Sbjct: 248 TTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWN 307
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ S R++ SWN +I+ Y +G+ AL+ Q+L PD +TF+S L ACS G +
Sbjct: 308 M--SRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALM 365
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+GR A +LS+ + ++ M G+ + +A + + MP
Sbjct: 366 DGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMP 410
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/622 (35%), Positives = 346/622 (55%), Gaps = 10/622 (1%)
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F SI + SF++N + + H + T + S + Y + +L++C +
Sbjct: 3 FYSIKKTQHTSFIFN-LFPFSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSK 61
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ GK +H G + + LV +YA + +FD++ ++L W V+I
Sbjct: 62 ALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIR 121
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Y + A+IL+ K GL D+ T+ V A L + + +++H Y I + +
Sbjct: 122 GYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWER 181
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
DL + +++ MYA+CG V A VFD + RD + WNSML Y QNG E++ L EM
Sbjct: 182 DLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMA 241
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ +P T + ++S+ + GR+ HG+ + + ++ A++DMYAKCG +
Sbjct: 242 ANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVK 301
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
A +F + E+ V SWN +I GY MHG AL+ F +M +E +PDHITF +L+A
Sbjct: 302 VALALFERLR--EKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAA 358
Query: 425 CSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CS L+DEGR + M + + P V+HY CM+D+LG G L EA+D+I+ M + P+
Sbjct: 359 CSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSG 418
Query: 484 VWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
VWGALL +C+IHG E+A L +LEP+ +G +V+++N+YA S KW V KLR+ M
Sbjct: 419 VWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMI 478
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
+K +KK A S IE + F D + +Y +++ + + AGY PD H
Sbjct: 479 DKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFH 538
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
DVE++++ M+ HSE+LA+AFG+++ +P + +TKNLR+C DCH A +FIS I R+I
Sbjct: 539 DVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREI 598
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
VRD NR+H F+ G CSC D+W
Sbjct: 599 TVRDVNRYHSFKHGMCSCGDHW 620
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 231/415 (55%), Gaps = 15/415 (3%)
Query: 6 PSTEGFYDQLLKSC---NFLASLRQIHSSLTTSGLI-NQALHLGAKIIIKYTTYGEPNTA 61
P+T Y LL+SC L +Q+H+ G+ NQ L K++ Y A
Sbjct: 44 PTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQ--DLATKLVHLYAVSNSLLNA 101
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
R+LF+ I K FLWN +IR YA NG + LY M G+ +++T PFVLKAC+
Sbjct: 102 RNLFDKI--PKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACS 159
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
+ S I EG+ +H +I++G+ D +V AAL+DMYAKCG D +VFD++ VRD V W
Sbjct: 160 ALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNS 219
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
M+ AY Q P+E++ L ++ G+ T+V+V S+ + + + +HG+ +
Sbjct: 220 MLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHG 279
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
F + ++ +++ MYA+CG+V+ A +F+ + ++ ++SWN+++TGY +G A AL LFD
Sbjct: 280 FQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFD 339
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAK 359
+M+ D +P+ +T + +++AC+ GR + ++ + I T+++ ++D+
Sbjct: 340 KMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVR-DYGITPTVQHYTCMIDLLGH 397
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
CG LD A ++ ++ + + W L+ +HG+ A +++E ++PD
Sbjct: 398 CGQLDEAYDLIRNM-SVKPDSGVWGALLNSCKIHGNVELAELALEKLIE--LEPD 449
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/722 (34%), Positives = 385/722 (53%), Gaps = 96/722 (13%)
Query: 34 TSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN----------------DK--SYS 75
T + QA L A++ P +AR L NS+ N D+ +
Sbjct: 8 TPRTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMPPST 67
Query: 76 FLWNTMIRAYANNGHCV-ETLELYSTMRRSGISSNSYTFPFVLKACA----SNSLILEGK 130
FL++T +RA + G L+ MRR+G+ + +TF F+ K + +SL+L
Sbjct: 68 FLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLL-CT 126
Query: 131 VVHGDIIRTGFLSDS-YVQAALVDMYAKCGQTDDGCKVFDEM------------------ 171
++H +RT S + +V +L+ MY + G D + FDE+
Sbjct: 127 MLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKM 186
Query: 172 -------------SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
VRD++SWT +I AY +A + EA+ F+ G+ D VT+++V
Sbjct: 187 GMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVL 246
Query: 219 SAVGQLGDVLKAQAVH--------------------GYAICNAFLEDLCI---------- 248
SA +L D+ +++H YA C F +
Sbjct: 247 SACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRP 306
Query: 249 --QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
N+I+ Y + G+V+ AR +FD ME RD+I++NSM+TGYI +GQ EALLLF M+
Sbjct: 307 QSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRH 366
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
D + + T + L++AC LG+ Q GR H I ++ D L A++DMY KCG +D A
Sbjct: 367 DLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEA 426
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F + +R+V +W +IAG +G G+ ALE F QM +G +P+ +++ ++L+ACS
Sbjct: 427 TIVFQRM--GKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACS 484
Query: 427 HAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+ L++EGR F +M L ++ P+++HY CM+D+LGR+G L EA D++K MP+ PN +W
Sbjct: 485 HSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIW 544
Query: 486 GALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
++L ACR+H I AA +L +LEP+ G +V + NIY S +W K+R M+ +
Sbjct: 545 ASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEER 604
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
+KK A +S I + F +D+ +P E+ +E ++ +K GY P S DV
Sbjct: 605 QVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDV 664
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
++E++E L HSEKLA+AFG++NL P V + KNLRVC DCHSA + IS ++ R+IIV
Sbjct: 665 DEEEKEQALLAHSEKLAIAFGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIV 724
Query: 661 RD 662
RD
Sbjct: 725 RD 726
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/650 (33%), Positives = 370/650 (56%), Gaps = 27/650 (4%)
Query: 43 HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
H+ +++ + + + N + +L N I+++ N +I++ G+ + L L
Sbjct: 24 HVSSRVPVSFVSL---NPSANLINDINSNN------NQLIQSLCKGGNLKQALHLLCCEP 74
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+ TF ++ +CA + + G VH ++ +GF D ++ L++MY + G D
Sbjct: 75 ----NPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSID 130
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV--ASA 220
KVFDE R + W + A +E L L+ + G SD T V A
Sbjct: 131 RALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACV 190
Query: 221 VGQLG--DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
V +L + K + +H + + + + ++ + +++ +YA+ G+V A VF M ++ +
Sbjct: 191 VSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFV 250
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCK--PNPVTALILVSACTYLGSRQLGRKFHG 336
SW++M+ + +N +AL LF M C PN VT + ++ AC L + + G+ HG
Sbjct: 251 SWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHG 310
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
YI+ + + NA++ MY +CG++ + +F+++ +R+V SWN LI+ YGMHG G
Sbjct: 311 YILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNM--KKRDVVSWNSLISIYGMHGFG 368
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYAC 455
+KA++ F M+ +GV P +I+F ++L ACSHAGL++EG+ F M +K + P ++HYAC
Sbjct: 369 KKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 428
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEH 510
MVD+LGRA L EA +I+ M P +VWG+LL +CRIH E A+ LF+LEP +
Sbjct: 429 MVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRN 488
Query: 511 TGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYW 570
G +VL+++IYA + W E + + ++ +GL+K S IE + + F + D NP
Sbjct: 489 AGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQI 548
Query: 571 KEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
+E++ + ++ E+K GY+P + L+D+++E++E ++ HSEKLAVAFG++N
Sbjct: 549 EEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGET 608
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLR+C DCH+ +FIS R+I+VRD NRFHHF G CSC DYW
Sbjct: 609 IRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/595 (35%), Positives = 345/595 (57%), Gaps = 9/595 (1%)
Query: 93 ETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAAL 151
+ LE++ G T+ ++ AC I K + ++ GF D Y++ +
Sbjct: 114 DALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRV 173
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ M+ KCG D C++FDEM R+ VSW +I+ Y + EA LF ++E
Sbjct: 174 LLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGP 233
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
T ++ A L + + +H AI +D+ + +++ MY++CG++E A VFD
Sbjct: 234 RTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDE 293
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M + ++ WNS++ GY +G + EAL L+ EM++S K + T I++ C+ L S
Sbjct: 294 MPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARA 353
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ H ++ + +D A++D Y+K G +D A ++F+ + S RN+ SWN LIAGYG
Sbjct: 354 KQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRM--SCRNIISWNALIAGYG 411
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEV 450
HGHG +A++ F +ML EG+ P+H+TF ++LSACS +GL + G + F MT+ VKP
Sbjct: 412 NHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRA 471
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQ 505
H+ACM+++LGR G L EA+ +I++ P P ++W ALL ACR+HG + AA L+
Sbjct: 472 MHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYG 531
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
+EPE ++++ NIY +S K +E + + +K KGL+ A S IE F + D+
Sbjct: 532 MEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDK 591
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+ ++V KV+ + + I GY+P+ + DE+ E + YHSEKLA+A+G++N
Sbjct: 592 HHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRMYHSEKLAIAYGLLNT 651
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +Q+ ++ R+C+DCHS + I+ I +R+I++RDA+RFHHF G+CSC DYW
Sbjct: 652 LEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 215/441 (48%), Gaps = 11/441 (2%)
Query: 12 YDQLLKSCNFLASLRQIH---SSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
YD L+ +C L S+R + + + +G ++ ++++ + G A LF+ +
Sbjct: 135 YDALINACIGLKSIRGVKRLCNYMVDNGF-EPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ S W T+I Y ++G+ VE L+ MR TF +++A A +I
Sbjct: 194 PARNAVS--WGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFP 251
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H I+ G D +V AL+DMY+KCG +D VFDEM + +V W +I Y
Sbjct: 252 GRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYAL 311
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EEAL L+ + + G+ D T + +L V +A+ VH + N F D+
Sbjct: 312 HGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVA 371
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++V Y++ G V+ AR VFD M R++ISWN+++ GY +G EA+ +F++M
Sbjct: 372 NTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGM 431
Query: 309 KPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN VT L ++SAC+ G + G + F + +K A ++++ + G LD A
Sbjct: 432 MPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAY 491
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHIT-FTSILSACS 426
+ P + + W L+ +HG+ L F+ G++P+ ++ + +L+ +
Sbjct: 492 ALIRKA-PFQPTANMWAALLRACRVHGN--LELGKFAAEKLYGMEPEKLSNYIVLLNIYN 548
Query: 427 HAGLIDEGRKCFADMTKLSVK 447
+G + E F + + ++
Sbjct: 549 SSGKLKEAADVFQTLKRKGLR 569
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/691 (34%), Positives = 371/691 (53%), Gaps = 30/691 (4%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++ +SLR Q+H ++T G + + LG +I Y GE + A +F + +
Sbjct: 10 LLRASARSSSLRGGVQLHGAITKMGFGSDTM-LGNNLIDMYVKCGELDLACEVFGGMRDR 68
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGK 130
S W ++ + +G L L MR S + N YT LKAC G
Sbjct: 69 NVVS--WTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV-RDLVSWTVMITAYEQA 189
+HG +R G+ V ++LV +Y+K G+ D +VFD + + +W M++ Y A
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186
Query: 190 EKPEEALILFQKTQQ-EGL-LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF--LED 245
+AL++F++ ++ EG D T S+ A LG + VH + F +
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ ++V MY +C + A VF+ +E++++I W +++ G+ Q GQ +EAL LF
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWR 306
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
S +P+ +V + GR+ H Y I D + N+++DMY KCG D
Sbjct: 307 SGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDE 366
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
AE MF ++ NV SW ++ G G HG GR+A+ F +M GV+PD +T+ ++LSAC
Sbjct: 367 AERMFREMRAP--NVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSAC 424
Query: 426 SHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SHAGL+DE R+ F+ + + +V+P+ +HYACMVD+LGRAG L EA D+I+ MP+ P V
Sbjct: 425 SHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGV 484
Query: 485 WGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W LL ACR+H G A + L ++ ++ +V +SN+ A + +WRE K+R+ M+
Sbjct: 485 WQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRR 544
Query: 540 KGLKKPAAFSVIEYGKDIQGFHTA---DRVNPYWKEVYKKVESMAVEIK-MAGY-MPDLS 594
+GLKK S +E GK++ F+ + +P ++ + + M ++ GY D
Sbjct: 545 RGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDAR 604
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAF-----GIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
ALHDV++E R L HSE+LAV G+ ++V KNLRVC DCH F+
Sbjct: 605 FALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKG 664
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+S + RR ++VRDANRFH FE G+CSC DYW
Sbjct: 665 LSAVVRRALVVRDANRFHRFEHGSCSCKDYW 695
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/660 (34%), Positives = 338/660 (51%), Gaps = 81/660 (12%)
Query: 97 LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA 156
LY +R + + P LK+C + L + +H + +G D +V ++L+ Y
Sbjct: 7 LYHFLRHVSFPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSYI 63
Query: 157 KCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ---------------- 200
+ G T VFD M +++V W+ +I Y E A L +
Sbjct: 64 RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123
Query: 201 -------------------KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+ EG D+ + SAVG + +V + VHGY +
Sbjct: 124 LVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAG 183
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
D C+ +++ MY +CG ++ VF D+ S N+++ G +N Q SEALLLF
Sbjct: 184 CRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFR 243
Query: 302 E-----------------------------------MQNSDCKPNPVTALILVSACTYLG 326
E MQ+ +PN VT ++ A +
Sbjct: 244 EFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVA 303
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ GR H + + D + +A++DMYAKCG A +F D PS RNV SWN +
Sbjct: 304 ALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIF-DAMPS-RNVVSWNAM 361
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LS 445
I GY MHG A++ F M + KPD +TFT +L ACS AGL +EGR+ F +M +
Sbjct: 362 IGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHG 421
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAA 500
+ P ++HYACMV +LGR+G L EA+D+I +MP P+ +WG+LL +CR++G E+AA
Sbjct: 422 ISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAA 481
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
LFQLEP + G +VL+SNIYA+ W V ++R++MKN GLKK S IE +
Sbjct: 482 EKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHML 541
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D +P + +K+ + +E+ G+ P LHDVE+++++++L HSEKLAVA
Sbjct: 542 LAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVAL 601
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
G+++ P ++V KNLR+C DCH A +FIS +R+I VRD NRFHHF+ G CSC DYW
Sbjct: 602 GLISTRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 213/497 (42%), Gaps = 87/497 (17%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
P LKSC R +H++ SGL + + ++ Y G ARS+F
Sbjct: 17 PPDPHLLPSALKSCPAQPLARALHAAAVVSGLAEDPF-VASSLLHSYIRLGATGAARSVF 75
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYT------------- 112
+ + W+ +I Y+ G L MR +G+ N T
Sbjct: 76 DRMPEKNVVG--WSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGR 133
Query: 113 ----------------FP------FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA 150
FP L A + GK VHG +++ G D+ V A
Sbjct: 134 ALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTA 193
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRD----------------------------------- 175
L+DMY KCG+ D+ +VF E S D
Sbjct: 194 LIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELN 253
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWT ++ Q + EA+ LF+ Q G+ +SVTI V A + ++ ++ H
Sbjct: 254 VVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHC 313
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+++ FL D+ + +++V MYA+CG AR +FD M R+++SWN+M+ GY +G A+
Sbjct: 314 FSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAAN 373
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF-----HGYIINSNMKIDATLR 350
A+ LF MQ KP+ VT ++ AC+ G + GR++ G+ I+ M+ A +
Sbjct: 374 AVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACM- 432
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQML 407
+ + + G LD A ++ N++ P E + W L+ ++G+ A E Q L
Sbjct: 433 ---VTLLGRSGKLDEAYDLINEM-PFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQ-L 487
Query: 408 EEGVKPDHITFTSILSA 424
E G +++ ++I ++
Sbjct: 488 EPGNAGNYVLLSNIYAS 504
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/677 (34%), Positives = 381/677 (56%), Gaps = 76/677 (11%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVE-TLELYSTMRRSGISSNSYTFPFVLKA 119
ARSL + I + + + + + +GH E + Y M G ++YTFP +LKA
Sbjct: 8 ARSLLDGIPHRRGRA-------ASSSVSGHGAEEAVAGYVRMLAGGARPDAYTFPSLLKA 60
Query: 120 CASNSLILEGKV-----VHGDIIRTGFLSDSYVQAALVDMYAK--------------CGQ 160
A+ +H +++ G S+++ ++L+ MYA C
Sbjct: 61 AAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLA 120
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
T G V W +I+ + ++ + E + F + ++ +VT VSV SA
Sbjct: 121 TGGGAPVM----------WNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSA 170
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN------------------- 261
G+ D+L VH + + L D ++N++V MYA CG+
Sbjct: 171 CGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASW 230
Query: 262 ------------VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
V++AR +FD M +RD I+W +M+ GY+Q G+ +AL F MQ +
Sbjct: 231 TSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVR 290
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ T + +V+AC LG+ + G Y+ +K+D + NA++DMY+KCG ++ A ++
Sbjct: 291 ADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDV 350
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F D+H R+ +W +I G ++G G +A++ F +ML PD +TF +L+AC+HAG
Sbjct: 351 FKDMH--NRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAG 408
Query: 430 LIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+D+GR+ F MT+ ++ P V HY C++D+LGRAG L EA D I +MP+ PN ++WG L
Sbjct: 409 LVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTL 468
Query: 489 LLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L +CR++G E+AA L +L+P+++ ++L+SN+YA SN+W++V ++R+ + KG+K
Sbjct: 469 LASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIK 528
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K S+IE I F ADR +P KE+Y K+E++ +++ AGY+PD++ L +V +E
Sbjct: 529 KEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPDVTEVLVEVTEE 588
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
+++ +L +HSEKLAV F ++ ++++ KNLR+C DCH+A + IS +Y R++IVRD
Sbjct: 589 EKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMCLDCHNAIKLISKLYGREVIVRDR 648
Query: 664 NRFHHFEGGTCSCNDYW 680
RFHHF G+CSC DYW
Sbjct: 649 TRFHHFRHGSCSCKDYW 665
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 14/271 (5%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF 115
G+ + AR LF+ H + + W MI Y G + LE + M+ + ++ +T
Sbjct: 241 GQVDRARDLFD--HMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVS 298
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
V+ ACA + G+ + R G D +V AL+DMY+KCG + VF +M RD
Sbjct: 299 VVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRD 358
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA--- 232
+WT +I + EEA+ +F + + D VT V V +A G V K +
Sbjct: 359 KFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFL 418
Query: 233 --VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRDLISWNSMLTGYIQ 289
Y I + C ++ + R G +++A D M K + W ++L
Sbjct: 419 SMTEAYNISPTVVHYGC----LIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRV 474
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVS 320
G + L + + D P+ TA IL+S
Sbjct: 475 YGNSEIGELAAERLLELD--PDNSTAYILLS 503
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/581 (38%), Positives = 330/581 (56%), Gaps = 11/581 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
N + +L++C + + G+ +H ++ +G D+ + LVD+YA CG +VF
Sbjct: 67 NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126
Query: 169 DEMSVR-DLVSWTVMITAYEQAEKPEEALILFQKTQQEG-LLSDSVTIVSVASAVGQLGD 226
DEM + ++ W V+I AY + E A+ L++ G + D+ T V A L D
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ + VH + + D+ + ++ MYA+CG +++A VF+ RD WNSM+
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA 246
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
QNG+ +EAL L M P T + +SA + GR+ HGY
Sbjct: 247 CGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
L+ +++DMYAK G + A +F + R + SWN +I G+GMHGH A E FS+M
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQL--LHRELISWNAMICGFGMHGHADHAFELFSRM 364
Query: 407 LEEG-VKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAG 464
E V PDHITF +LSAC+H G++ E ++ F M T S+KP V+HY C+VD+LG +G
Sbjct: 365 RSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSG 424
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
EA D+IK M + P+ +WGALL C+IH E+A L +LEPE G +VL+SN
Sbjct: 425 RFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSN 484
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IYA S KW E ++R+ M N+GLKK A S IE GF D +P ++Y+++E
Sbjct: 485 IYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELER 544
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ I GY+PD + H+VED+++ +M+ HSE+LA+AFG+++ P + VTKNLRV
Sbjct: 545 LEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRV 604
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH + IS I +R+II+RD NR+HHF G CSC D+W
Sbjct: 605 CEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 226/448 (50%), Gaps = 10/448 (2%)
Query: 6 PSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P Y +L+SC ++R Q+H+ L SG A+ L +++ Y + G + AR
Sbjct: 65 PYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAV-LATRLVDLYASCGHVSLAR 123
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACA 121
+F+ + N + FLWN +IRAYA +G C +ELY M G + +++T+P VLKACA
Sbjct: 124 RVFDEMPNQGNV-FLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACA 182
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
+ + G+ VH ++RT + +D +V L+DMYAKCG D+ VF++ ++RD W
Sbjct: 183 ALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNS 242
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
MI A Q +P EAL L + EG+ T+VS SA + + + +HGY
Sbjct: 243 MIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRG 302
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
F ++ S++ MYA+ G V A ++F+ + R+LISWN+M+ G+ +G A A LF
Sbjct: 303 FGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFS 362
Query: 302 EMQN-SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAK 359
M++ + P+ +T + ++SAC + G Q ++ ++ ++K ++D+
Sbjct: 363 RMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGH 422
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
G A ++ + + + W L+ G +H + A E Q L E D +
Sbjct: 423 SGRFKEASDVIKGML-VKPDSGIWGALLNGCKIHKNVELA-ELALQKLIELEPEDAGNYV 480
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVK 447
+ + + +G +E + MT +K
Sbjct: 481 LLSNIYAESGKWEEAARVRKLMTNRGLK 508
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 324/523 (61%), Gaps = 10/523 (1%)
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
++FDEM W ++ Y + P++A+ ++ K + G+ D T V A +L
Sbjct: 90 QLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELA 149
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
++ +HG+ + + ++ ++ MY + G + A +F M +RDL++WN+++
Sbjct: 150 ELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIA 209
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+Q G +S+AL F EM + KP+ VT + +SAC +LG + G + + + +
Sbjct: 210 VCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDS 269
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ + NA +DM AKCGD+D A N+F+++ +RNV SW+ +I GY ++G KAL FS+
Sbjct: 270 NIIVHNARLDMCAKCGDMDKAMNLFDEM--PQRNVISWSTVIGGYAVNGESEKALALFSR 327
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLGR 462
M +GV+P+++TF ++LSACSH G ++EG + F M + +++P +HYACMVD+LGR
Sbjct: 328 MKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGR 387
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLM 517
+G L EA++ IK MP+ + +WGALL AC IH G+ A+ LF+L PE Y VL+
Sbjct: 388 SGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLL 447
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SN+YAA+ +W V K+R+ MK KG +K AA+S +E+ +I + D+ +P + K+
Sbjct: 448 SNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKL 507
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
E + ++K GY+P+ HDVEDE++E L+ HSEKLA+AF ++N +P+ ++V KNL
Sbjct: 508 EDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNL 567
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
R+C DCH+ + +S I R+II+RD NRFHHF+ G CSC D+W
Sbjct: 568 RICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 188/341 (55%), Gaps = 6/341 (1%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF 115
G+ + AR LF+ +H K FLWNT+++ Y NG + + +Y MR G+ + +TFPF
Sbjct: 83 GDMSYARQLFDEMH--KPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPF 140
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
V+KACA + + G +HG +++ G + V+ L+ MY K G+ +F M RD
Sbjct: 141 VIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERD 200
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
LV+W +I Q +AL F++ G+ DSVTIVS SA G LG + + ++
Sbjct: 201 LVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYE 260
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+A ++ + N+ + M A+CG+++KA +FD M +R++ISW++++ GY NG++ +
Sbjct: 261 FAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEK 320
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS---NMKIDATLRNA 352
AL LF M+N +PN VT L ++SAC++ G G ++ ++ S N++
Sbjct: 321 ALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYAC 380
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
++D+ + G L+ A N F I P E + W L+ +H
Sbjct: 381 MVDLLGRSGHLEEAYN-FIKIMPIEADPGIWGALLGACAIH 420
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/682 (34%), Positives = 367/682 (53%), Gaps = 91/682 (13%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKY---TTYGEPNTARSLFNSIHNDK 72
+ C L+QIH+ +G I+ L A ++K+ +T E AR F+ IH+
Sbjct: 22 ISRCKTTRHLKQIHAHFIKTGQIHHPL--AAAELLKFLTLSTQREIKYARKFFSQIHHPN 79
Query: 73 SYSFLWNTMIRAYAN-------NGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNS 124
+S WNT+IRA A+ + + +E L +S M G + N +TFP VLKACA +
Sbjct: 80 CFS--WNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLA 137
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
I EGK +HG +++ G V DE +LV VM
Sbjct: 138 RIEEGKQLHGFVVKLGL-------------------------VSDEFVRSNLVRVYVMCG 172
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
A + A +LF +T+ EG
Sbjct: 173 AMKDAH------VLFYQTRLEG-------------------------------------- 188
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
++ + N ++ Y R G++ +R +FD M + ++SWN M++G QNG EA+ +F +MQ
Sbjct: 189 NVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQ 248
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
D PN VT + ++ A + LG+ +LG+ H + + ++ID L +A++DMY+KCG +D
Sbjct: 249 LGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSID 308
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
A +F I +++N +W+ +I G MHG R AL+ F +M + GV P + + +LSA
Sbjct: 309 KAVQVFEGIR-NKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSA 367
Query: 425 CSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CSHAGL++EGR + M + + P ++HY CMVD+LGRAGCL EA +I MP+ P+D
Sbjct: 368 CSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDV 427
Query: 484 VWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
+ ALL AC++HG I A L P +G +V +SN++A+ W V K+R MK
Sbjct: 428 ILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMK 487
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
++K S IE I F D +P + ++ +E M+ ++ GY P+ + L
Sbjct: 488 ELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLL 547
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
++++++++ L+YHSEK+A+AFG+++ P+ +Q+ KNLRVC DCHS+ + +S IY RKI
Sbjct: 548 NMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKI 607
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
IVRD RFHHFE G+CSC DYW
Sbjct: 608 IVRDRKRFHHFENGSCSCMDYW 629
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/586 (36%), Positives = 339/586 (57%), Gaps = 19/586 (3%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L+ ++IHS + +G +N L + +I Y+ + N A S+F+ ++ + F +N +
Sbjct: 53 LSKGKEIHSYMLINGFLNSPLSI-TSLINMYSKCNQMNFALSIFSDPTHEIN-VFAFNAI 110
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I + NG E E Y MR G+ + +TFP +KAC +LE K +HG + + G
Sbjct: 111 ISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLD---VLEIKKIHGLLFKFGL 167
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D ++ +ALV+ Y K G + F+E+ +RD+V W M+ Y Q + E L F++
Sbjct: 168 ELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRR 227
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
E ++ T+ V S +GD+ + +HG+A+ + + + NS++ MY +C
Sbjct: 228 MNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKC 287
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+E A +F+MM ++D+ SWNS+++ + Q G L L D M + +P+ VT ++ A
Sbjct: 288 IEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPA 347
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDAT------LRNAVMDMYAKCGDLDTAENMFNDIHP 375
C++L + GR+ HGY+I S + D L+NAV+DMYAKCG + A +F +
Sbjct: 348 CSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM-- 405
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
S ++V+SWN++I GYGMHG+G +ALE FS+M E +KPD +TF +LSACSHAG + +GR
Sbjct: 406 SNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR 465
Query: 436 KCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
M +K V P ++HY C++DMLGRAG L EA+++ MP+ N VW ALL ACR+
Sbjct: 466 NFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRL 525
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H E+AA +F+LEPEH G +VLMSN+Y A ++ EV ++R M+ + ++K S
Sbjct: 526 HKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCS 585
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
IE + F +ADR +P +Y + S+ ++ GY+PD+ C
Sbjct: 586 WIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPDVFC 631
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 189/387 (48%), Gaps = 13/387 (3%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF-DEMSVRD 175
L+A A + + +GK +H ++ GFL+ +L++MY+KC Q + +F D +
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+ ++ +I+ + PEE +QK + EG++ D T A+ DVL+ + +HG
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTF---PCAIKACLDVLEIKKIHG 160
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
D+ I +++V Y + G +E A++ F+ + RD++ WN+M+ GY Q GQ
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
L F M + P+ T ++S +G GR HG+ + + N+++D
Sbjct: 221 VLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KC ++ A +F + E+++ SWN +++ + G L +ML G++PD
Sbjct: 281 MYGKCKCIEDALEIFEMMR--EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDL 338
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY------ACMVDMLGRAGCLYEA 469
+T T++L ACSH + GR+ M + + K ++DM + G + +A
Sbjct: 339 VTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDA 398
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIHG 496
+ ++M + + W +++ +HG
Sbjct: 399 HLVFERMS-NKDVASWNIMIMGYGMHG 424
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 130/265 (49%), Gaps = 6/265 (2%)
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF-DM 271
T ++ A ++ K + +H Y + N FL S++ MY++C + A +F D
Sbjct: 39 TCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDP 98
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ ++ ++N++++G+I NG E + +M+N P+ T + AC L ++
Sbjct: 99 THEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC--LDVLEI- 155
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+K HG + +++D + +A+++ Y K G ++ A+ F ++ R+V WN ++ GY
Sbjct: 156 KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL--PIRDVVLWNAMVNGYA 213
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
G LE F +M +E V P T T +LS + G ++ GR K+ V
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQM 476
++DM G+ C+ +A ++ + M
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMM 298
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N T + + A + + G++ H Y++ + ++++MY+KC ++ A ++F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 371 NDIHPS-ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
+D P+ E NV ++N +I+G+ +G + EF+ +M EGV PD TF + AC
Sbjct: 96 SD--PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLD-- 151
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ E +K + K ++ +V + +V+ + G + A +++P+ + +W A++
Sbjct: 152 -VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI-RDVVLWNAMV 209
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/639 (35%), Positives = 354/639 (55%), Gaps = 14/639 (2%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG--ISSN 109
Y+ G N A+ +F +N S WNTM+ ++ G +T +L M G + ++
Sbjct: 334 YSKCGCINDAQVIFKLNNNKNVVS--WNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRAD 391
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVF 168
T + C S++ K +H ++ F+ ++ V A V YAKCG +VF
Sbjct: 392 EVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVF 451
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
+ + + SW +I Y Q+ P +L + + + GLL D T+ S+ SA Q+ +
Sbjct: 452 CSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLK 511
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+ VHG I N D + S++++Y CG + A ++FD ME + L+SWN+M+ GY+
Sbjct: 512 LGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYL 571
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
QNG AL LF +M +P ++ + + AC+ L S +LGR+ HGY + ++ +A
Sbjct: 572 QNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAF 631
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ +V+DMYAK G + + +FN + ER+V+SWN ++ GYG+HG ++A++ F +M
Sbjct: 632 IACSVIDMYAKNGSVMESFKVFNGL--KERSVASWNAMVMGYGIHGRAKEAIKLFEEMQR 689
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLY 467
G PD +TF +L+AC+H+GL+ EG M L + P +KHYAC++DML RAG L
Sbjct: 690 TGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLD 749
Query: 468 EAFDM-IKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIY 521
EA + ++M P +W LL +CRIH GE A LF EPE +VL+SN+Y
Sbjct: 750 EALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLY 809
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A S KW EV K+R+ MK L+K A S IE + F + ++E+ +
Sbjct: 810 AGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLE 869
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
EI GY PD S HD+ +E++ L HSEKLA+ +G++ + ++V KNLR+C
Sbjct: 870 REIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICV 929
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH+A + IS + R+I+VRD RFHHF+ G CSC DYW
Sbjct: 930 DCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 210/419 (50%), Gaps = 12/419 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH ++ S ++ L ++I Y+ G P+ +RS+F+++ K F WN +I +Y
Sbjct: 101 RKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALR--KKNLFQWNAVISSY 158
Query: 86 ANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ N LE++ M SG+ +++TFP V+KACA S + G VHG +++T + D
Sbjct: 159 SRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVED 218
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF----Q 200
+V ALV Y G D +VF M R+LVSW MI + EE +L +
Sbjct: 219 VFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMME 278
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
K + D T+ +V + ++ + VHG A+ + +++ + N+++ MY++CG
Sbjct: 279 KDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCG 338
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPVTALIL 318
+ A+++F + ++++SWN+M+ G+ G + L +M D + + VT L
Sbjct: 339 CINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNA 398
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATL-RNAVMDMYAKCGDLDTAENMFNDIHPSE 377
V C ++ H Y + + L NA + YAKCG L A +F I
Sbjct: 399 VPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIR--S 456
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+ V+SWN LI GY R +L+ + QM G+ PD T S+LSACS + G++
Sbjct: 457 KTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKE 515
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 155/305 (50%), Gaps = 10/305 (3%)
Query: 129 GKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +H + + LS D + ++ MY+ CG DD VFD + ++L W +I++Y
Sbjct: 100 GRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYS 159
Query: 188 QAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ E L +F K E GLL D+ T V A + +V AVHG + +ED+
Sbjct: 160 RNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDV 219
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N++V+ Y G+V A VF +M +R+L+SWNSM+ + NG + E LL +M
Sbjct: 220 FVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEK 279
Query: 307 DCK----PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
D + P+ T ++ C +G+ HG + ++ + + NA+MDMY+KCG
Sbjct: 280 DDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGC 339
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG--VKPDHITFTS 420
++ A+ +F + +NV SWN ++ G+ G K + QML G ++ D +T +
Sbjct: 340 INDAQVIFK--LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILN 397
Query: 421 ILSAC 425
+ C
Sbjct: 398 AVPVC 402
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 13/311 (4%)
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED---LCIQNSIVAMY 256
+K+ + L + + A G+ D+ + +H +A L + LC + ++ MY
Sbjct: 70 EKSSSDAFLLLREALGLLLQASGRRKDIQLGRKIHQLVSESARLSNDDVLCTR--VITMY 127
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTA 315
+ CG+ + +R VFD + K++L WN++++ Y +N L +F +M S P+ T
Sbjct: 128 SMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTF 187
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+V AC + Q+G HG ++ + + D + NA++ Y G + A +F I P
Sbjct: 188 PCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFK-IMP 246
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE----GVKPDHITFTSILSACSHAGLI 431
ERN+ SWN +I + +G + QM+E+ PD T ++L C+ I
Sbjct: 247 -ERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREI 305
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
G+ KLS+ EV ++DM + GC+ +A +I ++ N W ++
Sbjct: 306 GVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDA-QVIFKLNNNKNVVSWNTMVGG 364
Query: 492 CRIHGEIAANY 502
G+I +
Sbjct: 365 FSAAGDIHKTF 375
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 319/539 (59%), Gaps = 39/539 (7%)
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
W + A + + P +A++LF + +Q + D+ T SV A L D+ + +HG
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN----------------- 281
F +L +QN IV +YA CG + +ARL+F+ M +RD+++WN
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215
Query: 282 --------------SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
SM+ GY+Q G+A EA+ LF +M+ + K N VT + +++AC LG+
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
LG + H Y K + + N ++DMY KCG L+ A +F ++ ER V SW+ +I
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEM--EERTVVSWSAMI 333
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSV 446
G MHG +AL FS M + G++P+ +TF +L ACSH GLI EGR+ FA MT+ +
Sbjct: 334 GGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGI 393
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAAN 501
P+++HY CMVD+L RAG L+EA + I MP+ PN VWGALL ACR+H E A
Sbjct: 394 IPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIK 453
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
+L +L+P + GY+V++SNIYA + +W + ++R+ MK++ +KK +S I + F
Sbjct: 454 HLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFV 513
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
+ +P ++++++ E + E+++ GY+P+ S L D+E+ ++ ++ HSEKLA+ FG
Sbjct: 514 AGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFG 573
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+MN E +++ KNLR+C DCHSAF+ IS I R+I+VRD NRFH F +CSC DYW
Sbjct: 574 LMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 216/435 (49%), Gaps = 36/435 (8%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLG-AKIIIKYTTYGEPNTARSLF 65
S+E LL++ N LRQ+H+ + + L L ++ +T + A+ +F
Sbjct: 26 SSETLKIDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTP--SFHYAQQIF 83
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ K +F+WN+ ++A A ++ + L+ +R+ + +++T VL+AC +
Sbjct: 84 KCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLD 143
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV-------- 177
+ G+++HG + + GF S+ Y+Q +V +YA CG+ + +F++M RD+V
Sbjct: 144 LSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQ 203
Query: 178 -----------------------SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
SWT MI Y Q K +EA+ LF K ++ G+ + VT+
Sbjct: 204 LIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTV 263
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
V+V +A LG + +H Y+ + F ++ I N+++ MY +CG +E+A VF+ ME+
Sbjct: 264 VAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEE 323
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
R ++SW++M+ G +G+A EAL LF +M +PN VT + L+ AC+++G GR+F
Sbjct: 324 RTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRF 383
Query: 335 HGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+ I M D+ ++ G L A ++ P + N W L+ +H
Sbjct: 384 FASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNM-PMKPNGVVWGALLGACRVH 442
Query: 394 GHGRKALEFFSQMLE 408
+ A E +LE
Sbjct: 443 KNVEMAEEAIKHLLE 457
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 7/243 (2%)
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
R+ H II +N + V + A A+ +F + + WN +
Sbjct: 45 RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALA 104
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
A+ F ++ + V PD T +S+L AC + + GR + K+ + +
Sbjct: 105 EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLY 164
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIAANY-LFQLEPE 509
+V + G + EA + ++M P D V W ++ G+ Y LF PE
Sbjct: 165 LQNMIVHLYASCGEMGEARLLFEKM--PQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPE 222
Query: 510 -HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK--KPAAFSVIEYGKDIQGFHTADRV 566
+ + M Y K +E L M+ G+K + +V+ D+ R+
Sbjct: 223 RNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRI 282
Query: 567 NPY 569
+ Y
Sbjct: 283 HEY 285
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/505 (40%), Positives = 311/505 (61%), Gaps = 8/505 (1%)
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
MI Y + K ++ ++ + + G+ DS T +V +V QL +A+H I
Sbjct: 113 MIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMG 172
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
F ++ + ++V MY C +V AR VFD + R+++SWN+++TGY N + + +F
Sbjct: 173 FESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFR 232
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
EMQ + KP VT + ++ AC +LG+ GR YI ++ ++++ + A++DMYAKCG
Sbjct: 233 EMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCG 292
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+D AE +F + +NV +WNVLI+GY M+G G AL+ FS+M+ E KPD +TF +
Sbjct: 293 VVDEAEKIFKAMRV--KNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGV 350
Query: 422 LSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L AC H GL++EGR F M + ++P ++HY CMVD+LGRAG L EA +I+ M + P
Sbjct: 351 LCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQP 410
Query: 481 NDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ +W LL ACRIHG E A L +LEP + +VL++N+YA +W +VG++RE
Sbjct: 411 DPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVRE 470
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
M + ++K S IE + F ++ + P ++EVYK + M ++K+AGY+ D
Sbjct: 471 MMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTGM 530
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
A +D+E+E++EH L YHSEKLA+AFG++ +++ KNLR+C DCH F+ +S +YR
Sbjct: 531 ASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVYR 590
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R I VRD NRFHHF GG CSC DYW
Sbjct: 591 RDISVRDRNRFHHFVGGACSCKDYW 615
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/571 (36%), Positives = 335/571 (58%), Gaps = 8/571 (1%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
+L S SL L+G+ +H II++G V L++ Y+K +VF+E +
Sbjct: 60 LLLSQTRSRSL-LKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERK 118
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+W+ +I+++ Q E+P A+ F + E L D S A LG ++VH
Sbjct: 119 SSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVH 178
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
I + D+ + +S+V MYA+CG++++AR VFD M R+++SW+ M+ GY Q G+
Sbjct: 179 CLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHE 238
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EA+ LF E N T ++ C +LG++ HG ++ + + ++++
Sbjct: 239 EAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLI 298
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
+Y+KCG ++ A +F+++ +N+ WN ++ H H ++A + F++M G++P+
Sbjct: 299 SLYSKCGLIEGAYRVFDEV--PIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPN 356
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
ITF +L ACSHAGL++EG+K FA M K ++P +HYA MVD+LGRAG L EA +IK
Sbjct: 357 FITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIK 416
Query: 475 QMPLPPNDSVWGALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
MP P +SVWGA + CRIHG AA+ +F+L +G V++SN YAA+ ++ +
Sbjct: 417 GMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYED 476
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
K R+ ++++G+KK S IE G + F DR + KE+Y+K+E + E++ AGY
Sbjct: 477 AAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGY 536
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
+ D S L +V E++ + YHSE+LA+AFG++++ +++ KNLRVC DCH+A +F
Sbjct: 537 VADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKF 596
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS + R IIVRD NRFH FE G CSC DYW
Sbjct: 597 ISKLSGRVIIVRDNNRFHRFEDGKCSCADYW 627
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 196/371 (52%), Gaps = 6/371 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGE-PNTARSLFNSIHNDKSYSFLWNTMIRA 84
+QIH+ + SGL Q + L +I + + + P + +F +++ S W+++I +
Sbjct: 74 QQIHAHIIKSGL--QVIPLVCHYLINFYSKTQLPLLSSQVFEE--SERKSSTTWSSVISS 129
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+A N V ++ + M + + + FP KACA GK VH +I+TG+ D
Sbjct: 130 FAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVD 189
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V ++LVDMYAKCG + VFDEM R++VSW+ MI Y Q + EEA+ LF++
Sbjct: 190 VFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALL 249
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
EGL + T+ SV G + + +HG ++ + +S++++Y++CG +E
Sbjct: 250 EGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEG 309
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A VFD + ++L WN+ML Q+ EA LF +M+N+ +PN +T L ++ AC++
Sbjct: 310 AYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSH 369
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
G + G+K+ + ++ +++D+ + G L A ++ + P+E S W
Sbjct: 370 AGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGM-PTEPTESVWG 428
Query: 385 VLIAGYGMHGH 395
I G +HG+
Sbjct: 429 AFITGCRIHGN 439
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/627 (34%), Positives = 358/627 (57%), Gaps = 11/627 (1%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF + N + +F N+++ Y+N G E +EL+ + SGI + +TF +L A
Sbjct: 194 ASQLFKHMLNKDTVTF--NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA 251
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
G+ VHG +++T F+ + +V AL+D Y+K Q D+ K+F EM D +S+
Sbjct: 252 VGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYN 311
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
V+IT+Y + +E+ LF+K Q ++ S ++ + +H AI
Sbjct: 312 VVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITV 371
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ ++N++V MYA+C ++A+ +FD + + + W +M++ Y+Q G+ E + +F
Sbjct: 372 GANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVF 431
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M+ + + T ++ AC L S LGR+ H +I S + +A++D YAKC
Sbjct: 432 SDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKC 491
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G + A F ++ ERN SWN LI+ Y +G+ L F QM++ G KPD ++F S
Sbjct: 492 GCMTDAIKSFGEM--PERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLS 549
Query: 421 ILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSACSH G ++E F MT++ V P+ +HY MVD+L R G EA ++ +MP
Sbjct: 550 VLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFE 609
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKL 533
P++ +W ++L +CRIH + AA+ LF +E ++ MSNIYA + +W V K+
Sbjct: 610 PSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKV 669
Query: 534 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
++ M+++G++K A+S +E F D+ +P K++ +K+ +++ E++ GY PD
Sbjct: 670 KKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDT 729
Query: 594 SCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYI 653
+CALHDV++ + L YHSE+ A+AF +MN + + V KNLR C DCH+A + IS I
Sbjct: 730 TCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQI 789
Query: 654 YRRKIIVRDANRFHHFEGGTCSCNDYW 680
R+IIVRD++RFHHF+ G CSC DYW
Sbjct: 790 VEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 216/454 (47%), Gaps = 11/454 (2%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I + +G+ + AR LF+ + + S W +I Y + E LY+ MRR GI
Sbjct: 80 MISGHLKFGKLSKARELFDGMVERTAVS--WTILIGGYLQSNQSKEAFRLYADMRRGGIE 137
Query: 108 SNSYTFPFVLKACA---SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG 164
+ T +L + ++I++ +H +I+ G+ + V +LVD Y K
Sbjct: 138 PDYVTLVTLLSGFGELETKNVIVQ---IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLA 194
Query: 165 CKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
++F M +D V++ ++T Y EEA+ LF + G+ T ++ SA L
Sbjct: 195 SQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGL 254
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
D Q VHG+ + F+ ++ + N+++ Y++ V++ +F M + D IS+N ++
Sbjct: 255 DDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVI 314
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
T Y NGQ E+ LF ++Q + L+S T + ++GR+ H I
Sbjct: 315 TSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGAN 374
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
++ + NA++DMYAKC A+ +F++I + ++ W +I+ Y G + + FS
Sbjct: 375 FESRVENALVDMYAKCNGDKEAQKIFDNI--ACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
M GV D TF SIL AC++ I GR+ + + + V + ++D + G
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI 498
C+ +A +MP N W AL+ A +G +
Sbjct: 493 CMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNV 525
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 179/373 (47%), Gaps = 10/373 (2%)
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQA-ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
N+ + G +VH + + + + ++ + K G+ ++FD M R VSWT+
Sbjct: 51 NNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+I Y Q+ + +EA L+ ++ G+ D VT+V++ S G+L +H + I
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
+ +L + NS+V Y + + A +F M +D +++NS++TGY G EA+ LF
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFL 230
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
E+ NS KP+ T L+SA L + G++ HG+++ +N + + NA++D Y+K
Sbjct: 231 ELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHD 290
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+D +F ++ E + S+NV+I Y +G +++ + F ++ F ++
Sbjct: 291 QVDEVGKLFXEM--PELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATL 348
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPL 478
LS + + + GR+ + E + +VDM + EA FD I
Sbjct: 349 LSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 479 PPNDSVWGALLLA 491
P W A++ A
Sbjct: 409 VP----WTAMISA 417
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 35/231 (15%)
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT------- 285
+ + + F + C N V + G++ A VFD M ++ IS N M++
Sbjct: 30 IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89
Query: 286 ------------------------GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
GY+Q+ Q+ EA L+ +M+ +P+ VT + L+S
Sbjct: 90 LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
L ++ + + H ++I + + + N+++D Y K L A +F H ++
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK--HMLNKDTV 207
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
++N L+ GY G +A+E F ++ G+KP TF ++LSA GL D
Sbjct: 208 TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA--VGLDD 256
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/532 (37%), Positives = 322/532 (60%), Gaps = 7/532 (1%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY KCG D VFD+M RD+VSWT +I Y Q P EA+ L + + T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
S+ A G G + +H A+ + ED+ + ++++ MYARC ++ A +VFD +
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
++ +SWN+++ G+ + L+ F EMQ + T + SA +G+ + GR
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
H ++I S K+ A + N ++ MYAK G + A +F+ + +R++ +WN ++ +
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM--DKRDLVTWNTMLTALAQY 238
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY 453
G G++A+ F ++ + G++ + ITF S+L+ACSH GL+ EG+ F M +V+PE+ HY
Sbjct: 239 GLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHY 298
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEP 508
VD+LGRAG L EA + +MP+ P +VWGALL ACR+H G+ AA+++F+L+P
Sbjct: 299 VSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDP 358
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
+ TG VL+ NIYA++ KW + ++R+ MK G+KK A S ++ + F D +P
Sbjct: 359 DDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHP 418
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
++Y+ E + + IK AGY+P+ + L + +++RE L YHSEK+A+AF ++N+
Sbjct: 419 KSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAG 478
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
A +++ KN+R+C DCHSAF+++S +++R+I+VRD NRFHHF G+CSC DYW
Sbjct: 479 ASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 176/346 (50%), Gaps = 3/346 (0%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G + AR +F+ + + S W +I YA N E + L M R+ N +
Sbjct: 2 YCKCGAVSDARHVFDKMPSRDVVS--WTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGF 59
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TF +LKA + G+ +H ++ + D YV +AL+DMYA+C Q D VFD +
Sbjct: 60 TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
++ VSW +I + + E L+ F + Q+ G + T S+ SA ++G + + +
Sbjct: 120 VSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 179
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
VH + I + + N+++ MYA+ G++ AR VFD M+KRDL++WN+MLT Q G
Sbjct: 180 WVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYG 239
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
EA+ F+E++ + N +T L +++AC++ G + G+ + + + N++ +
Sbjct: 240 LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYV 299
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ +D+ + G L A +F P E + W L+ MH + +
Sbjct: 300 SFVDLLGRAGLLKEAL-IFVFKMPMEPTAAVWGALLGACRMHKNAK 344
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/663 (33%), Positives = 369/663 (55%), Gaps = 19/663 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ + +G A +I Y A ++F+S+ S + WN MI YA
Sbjct: 226 QVHAMIVKNGFEFTTFVCNA-LICMYLKSEMVGDAEAVFDSMVVRDSVT--WNIMIGGYA 282
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
G +E +++ MR +G+ + F LK C+ + K +H +++ G+
Sbjct: 283 AIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD 342
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL+ Y+KC D+ K+F + ++V+WT MI + Q ++A+ LF + +E
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSRE 402
Query: 206 GLLSDSVTIVSV-ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G+ + T +V A L L AQ + Y + + + +++ Y + GNV +
Sbjct: 403 GVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAY-----YEKVPSVATALLDAYVKTGNVVE 457
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
+ VF + +D+++W++MLTG Q + +A+ +F ++ KPN T +++AC+
Sbjct: 458 SARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSS 517
Query: 325 -LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ + G++ H + S + +A++ MY+K G++++AE +F ER++ SW
Sbjct: 518 SAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFT--RQEERDIVSW 575
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I GYG HG +KALE F M +G+ D +TF +L+AC+HAGL++EG K F M K
Sbjct: 576 NSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GE 497
+ + +HY+CMVD+ RAG +A D+I MP P + ++W LL ACR+H G+
Sbjct: 636 DYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGK 695
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+AA L L+P +VL+SNI+A + W E +R+ M + +KK A S IE I
Sbjct: 696 LAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRI 755
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D +P+ VY K+E +++++K GY PD + HDVE+E +E +L+ HSE+LA
Sbjct: 756 FSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLA 815
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+A+G++ L P A +Q+ KNLR+C DCH+ IS I R +IVRD+NRFHHF+GG CSC
Sbjct: 816 IAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCG 875
Query: 678 DYW 680
YW
Sbjct: 876 GYW 878
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 214/456 (46%), Gaps = 14/456 (3%)
Query: 58 PNTARSLFNSIH-NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
P A LF+ D S+ +N ++ ++ N H E L L+ + SG+ + T
Sbjct: 54 PRYAHQLFDETPLKDISH---YNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCA 110
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
LK C + G+ VH +++GFL D V +LVDMY K +DG +FDEM ++++
Sbjct: 111 LKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT +++ Y + +E + L + Q EG+ + T +V A+ + VH
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ N F + N+++ MY + V A VFD M RD ++WN M+ GY G E
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
+F M+ + K + + C+ ++ H ++ + + +R A+M
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y+KC +D A +F+ + + NV +W +I G+ + + +KA++ F QM EGV+P+H
Sbjct: 351 YSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHF 409
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
T++++L+ + L + A + K + ++D + G + E+ +
Sbjct: 410 TYSTVLAGKPSSLL----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVF--Y 463
Query: 477 PLPPNDSV-WGALL--LACRIHGEIAANYLFQLEPE 509
+P D V W A+L LA E A QL E
Sbjct: 464 SIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/643 (34%), Positives = 355/643 (55%), Gaps = 10/643 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G+ +I Y+ + A +FN I + + +W M+ Y+ N ++S MR
Sbjct: 199 VGSGLIDAYSLCSLVSDAEHVFNGI--VRKDAVVWTAMVSCYSENDCPENAFRVFSKMRV 256
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
SG N + VLKA ++ GK +HG I+T ++ +V AL+DMYAKCG D
Sbjct: 257 SGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKD 316
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
F+ + D++ + MI+ Y Q+ + E+A LF + + +L + ++ SV A
Sbjct: 317 ARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTN 376
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ + + +H +AI DL + N+++ YA+C +++ + +F + + +SWN++
Sbjct: 377 MVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTI 436
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ G+ Q+G EAL +F EMQ + VT ++ AC S + + H I S
Sbjct: 437 VVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTF 496
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
D + N+++D YAKCG + A +F H ER++ SWN +I+GY +HG ALE F
Sbjct: 497 NNDTVIGNSLIDTYAKCGYIRDALKVFQ--HLMERDIISWNAIISGYALHGQAADALELF 554
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGR 462
+M + V+ + ITF ++LS CS GL++ G F M +KP ++HY C+V +LGR
Sbjct: 555 DRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGR 614
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLM 517
AG L +A I +P P+ VW ALL +C IH G +A + ++EP+ +VL+
Sbjct: 615 AGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLL 674
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SN+YAA+ +V LR+ M+N G++K S +E +I F +P + + +
Sbjct: 675 SNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAML 734
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
E + ++ GY+PD++ LHDV+ E + ML HSE+LA+A+G++ P +++ KNL
Sbjct: 735 EWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNL 794
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
R C DCH+AF IS I +R+IIVRD NRFHHFE G CSC DYW
Sbjct: 795 RSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 160/330 (48%), Gaps = 4/330 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS--DSYVQAALVDMYAKCGQTDDGCK 166
+S+ L+ C + G+ VHG ++R G + D + L++MY K G +
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD M R++VS+ ++ A+ Q E A LF++ + EG + + ++ +
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
A VH A + + + ++ Y+ C V A VF+ + ++D + W +M++
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y +N A +F +M+ S CKPNP ++ A L S LG+ HG I + +
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTE 297
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ A++DMYAKCGD+ A F I P + +V + +I+ Y +A E F ++
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMI-PYD-DVILLSFMISRYAQSNQNEQAFELFLRL 355
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+ V P+ + +S+L AC++ +D G++
Sbjct: 356 MRSSVLPNEYSLSSVLQACTNMVQLDFGKQ 385
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 8/185 (4%)
Query: 6 PSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P T+ Y +L++C AS+R QIH S+ S N + +G +I Y G A
Sbjct: 462 PCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTV-IGNSLIDTYAKCGYIRDAL 520
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F + S WN +I YA +G + LEL+ M +S + SN TF +L C+S
Sbjct: 521 KVFQHLMERDIIS--WNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSS 578
Query: 123 NSLILEGKVVHGDI-IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWT 180
L+ G + + I G +V + + G+ +D + ++ S + W
Sbjct: 579 TGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWR 638
Query: 181 VMITA 185
++++
Sbjct: 639 ALLSS 643
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/676 (35%), Positives = 364/676 (53%), Gaps = 77/676 (11%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y G N AR LF W+++I Y G VE LEL+ M+ G
Sbjct: 78 MIGAYANSGRLNEARKLF--YETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N +T+ VL+ C+ L+ +GK +H I+T F S+++V LVDMYAKC + +
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 168 FD-EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
F+ R+ V WT M+T Y Q +A+ F+ + EG+ + T S+ +A G +
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISA 255
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
VHG + + F ++ + +++V MY++CG++ AR + + ME D +SWNSM+ G
Sbjct: 256 CGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVG 315
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
++ G EAL LF M K + T LV+
Sbjct: 316 CVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVN-------------------------- 349
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
NA++DMYAK G D A ++F + ++++V SW L+ G +G +AL F +M
Sbjct: 350 ----NALVDMYAKRGYFDYAFDVFEKM--TDKDVISWTSLVTGCVHNGSYEEALRLFCEM 403
Query: 407 LEEGVKPDHITFTSILSACSHA--------GLIDEGRKCFADM--------TKL------ 444
G+ PD I ++LSA ++ G I++ K F M T L
Sbjct: 404 RIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQ 463
Query: 445 ---------------SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+KP +HYACM+D+LGR+G L EA +++ QM + P+ +VW ALL
Sbjct: 464 NGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALL 523
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+HG + AAN LF+LEP++ +VL+SN+Y+A+ KW E K R MK +G+ K
Sbjct: 524 AACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSK 583
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE + F + DR +P E+Y KV+ + + IK AGY+PD++ ALHD+++E
Sbjct: 584 EPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEG 643
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L YHSEKLAVAFG++ + P A +++ KNLR+C DCH+A +++S ++ R +I+RD+N
Sbjct: 644 KELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSN 703
Query: 665 RFHHFEGGTCSCNDYW 680
FHHF G CSC+DYW
Sbjct: 704 CFHHFREGACSCSDYW 719
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 11/289 (3%)
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
SDS ++S S G++ D K V D C N+++ YA G + +AR +
Sbjct: 42 SDSNWVLSNLSKCGRVDDARKLFDVMPD-------RDECSWNTMIGAYANSGRLNEARKL 94
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F R I+W+S+++GY + G EAL LF EMQ +PN T ++ C+
Sbjct: 95 FYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLL 154
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ G++ H + I + +A + ++DMYAKC + AE +F ++ P +RN W ++
Sbjct: 155 EKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLF-ELAPDKRNHVLWTAMVT 213
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
GY +G G KA+E F M EG++ + TF SIL+AC G + + +
Sbjct: 214 GYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGA 273
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
V + +VDM + G L A M++ M + +D V W ++++ C G
Sbjct: 274 NVFVGSALVDMYSKCGDLSNARRMLETMEV--DDPVSWNSMIVGCVRQG 320
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/671 (34%), Positives = 367/671 (54%), Gaps = 43/671 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+++ Y+ G + F + + + WN +I Y+ +G ++ Y+TM + S
Sbjct: 75 LLLAYSKSGHLSEMERTFEKLPDRDGVT--WNVLIEGYSLSGLVGAAVKAYNTMMKD-FS 131
Query: 108 SN--SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
SN T +LK +SN + GK +HG +I+ GF S V + L+DMY+K G D
Sbjct: 132 SNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAK 191
Query: 166 KVF----DEMSV--------------------------RDLVSWTVMITAYEQAEKPEEA 195
KVF D +V +D VSW+ MI Q +EA
Sbjct: 192 KVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEA 251
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+ F++ + EGL D SV A G LG + + +H I + + + ++++ M
Sbjct: 252 IECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDM 311
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y +C + A+ VFD M++++++SW +M+ GY Q G+A EA+ +F +MQ S P+ T
Sbjct: 312 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTL 371
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+SAC + S + G +FHG I + + T+ N+++ +Y KCGD+D + +FN+++
Sbjct: 372 GQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNV 431
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
R+ SW +++ Y G +A++ F +M++ G+KPD +T T ++SACS AGL+++G+
Sbjct: 432 --RDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQ 489
Query: 436 KCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F M + + P HY+CM+D+ R+G + EA I MP P+ W LL ACR
Sbjct: 490 RYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRN 549
Query: 495 HGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
G + AA L +L+P H + L+S+IYA+ KW V +LR MK K ++K S
Sbjct: 550 KGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQS 609
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
I++ + F D +PY ++Y K+E + +I GY PD S HDVE+ + ML
Sbjct: 610 WIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKML 669
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
N HSE+LA+AFG++ + ++V KNLRVC DCH+A + IS + R+I+VRDA RFH F
Sbjct: 670 NCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRF 729
Query: 670 EGGTCSCNDYW 680
+ GTCSC D+W
Sbjct: 730 KDGTCSCGDFW 740
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 153/369 (41%), Gaps = 71/369 (19%)
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
LG + +HG I + + N+IV YA + AR VFD + + +L SWN++
Sbjct: 16 LGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNL 75
Query: 284 LTGYIQNGQASEALLLFDEMQNSD--------------------------------CKPN 311
L Y ++G SE F+++ + D
Sbjct: 76 LLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLT 135
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT + ++ + G LG++ HG +I + + + ++DMY+K G + A+ +F
Sbjct: 136 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFY 195
Query: 372 DIHPS----------------------------ERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ E++ SW+ +I G +G ++A+E F
Sbjct: 196 GLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECF 255
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
+M EG+K D F S+L AC G I++GR+ A + + +++ + + ++DM +
Sbjct: 256 REMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKC 315
Query: 464 GCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEHTG----YFVL 516
CL+ A FD +KQ N W A+++ G L+ + +G ++ L
Sbjct: 316 KCLHYAKTVFDRMKQ----KNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTL 371
Query: 517 MSNIYAASN 525
I A +N
Sbjct: 372 GQAISACAN 380
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 40/260 (15%)
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA-------------------- 358
+ C LG+ + + HG II + + L N ++ YA
Sbjct: 10 IKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNL 69
Query: 359 -----------KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
K G L E F + +R+ +WNVLI GY + G A++ ++ M+
Sbjct: 70 FSWNNLLLAYSKSGHLSEMERTFEKL--PDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127
Query: 408 EE-GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
++ +T ++L S G + G++ + KL + + + ++DM + GC+
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187
Query: 467 YEAFDMIKQMPLPPNDSVWGAL---LLACRIHGEIAANYLFQLEPEHTGYFVLMSNIYAA 523
+A + + N ++ L LLAC + E A +E + + ++ + A
Sbjct: 188 SDAKKVFYGLD-DRNTVMYNTLMGGLLACGMI-EDALQLFRGMEKDSVSWSAMIKGL-AQ 244
Query: 524 SNKWREVGKLREDMKNKGLK 543
+ +E + +MK +GLK
Sbjct: 245 NGMEKEAIECFREMKIEGLK 264
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/634 (34%), Positives = 359/634 (56%), Gaps = 14/634 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C L L+ Q+HS L +G+ + + G+ + + Y G+ TA +FNS +D
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL-YVKCGDVETALVIFNS--SD 306
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
++ LWN M+ A+ ++ EL+ M+ +GI N +T+P +L+ C I G+
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++TGF SD YV L+DMY+K G + +V + + +D+VSWT MI Y Q E
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
++AL F++ Q+ G+ D++ + S S + + + +H + + D+ I N+
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V +YARCG + +A F+ +E +D I+WN +++G+ Q+G EAL +F M S K N
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHN 546
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + +SA L + G++ H +I + + + NA++ +Y KCG + A+ F+
Sbjct: 547 VFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFS 606
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ SERN SWN +I HG G +AL+ F QM +EG+KP+ +TF +L+ACSH GL+
Sbjct: 607 EM--SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F M+ + ++P HYAC++D+ GRAG L A I++MP+ + VW LL
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC++H GE AA +L +LEP + +VL+SN YA + KW ++R+ M+++G++K
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE 784
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F DR++P +++Y + + + GY + HD E E R
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGR 844
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ HSEKLAV FG+M+L P ++V KNLRV
Sbjct: 845 DPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 232/463 (50%), Gaps = 6/463 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+IH+ T GL + +G +I Y+ G AR +F + + S W M+ YA
Sbjct: 63 EIHAKAVTRGLGKYRI-VGNLLIDLYSKNGLVLPARRVFEELSARDNVS--WVAMLSGYA 119
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG E L LY M R+G+ Y VL +C L +G+++H + GF S+ +
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V A++ +Y +CG +VF +M RD V++ +I+ + Q E AL +F++ Q G
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L D VTI S+ +A LGD+ K +H Y D ++ S++ +Y +CG+VE A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
++F+ ++ +++ WN ML + Q +++ LF +MQ + +PN T ++ CT
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
LG + H + + + D + ++DMY+K G L+ A + + E++V SW +
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML--KEKDVVSWTSM 417
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
IAGY H + AL F +M + G+ PD+I S +S C+ + +G + A +
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+V + +V++ R G + EAF +++ ++ W L+
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIE-HKDEITWNGLV 519
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR-QL 330
M +R S L G++ + ++ L LF + P+ + AC G R Q+
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
+ H + + + N ++D+Y+K G + A +F ++ S R+ SW +++GY
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL--SARDNVSWVAMLSGY 118
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+G G +AL + QM GV P +S+LS+C+ A L +GR A K E+
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMP 477
++ + R G A + MP
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMP 205
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/684 (32%), Positives = 371/684 (54%), Gaps = 55/684 (8%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
TE + L+ + L QIH+ + L + +L + ++I + N + ++FN
Sbjct: 80 TEAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSL-ITTQLISSSSLRKSINHSLAVFN- 137
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
H+ F +N +IR N H + + M RSGI + T+PFVLK+ A
Sbjct: 138 -HHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTE 196
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-----DLVSWTVM 182
G +H I+R G DS+V+ +LVDMY K + KVFDE R + W V+
Sbjct: 197 LGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVL 256
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I +A ++A+ LF+ ++ +S S
Sbjct: 257 IKGCCKAGSMKKAVKLFKAMPKKENVSWS------------------------------- 285
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+++ +A+ G++++A +FD M +++++SW +M+ G+ +NG + +AL +F +
Sbjct: 286 --------TLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSK 337
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M +PN T + +SAC +G + G + H YI ++ + + L A++DMYAKCG+
Sbjct: 338 MLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGN 397
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
+++A +F + ++++ +W V+I G+ +HGH +A+ F QM+ G+KPD + F ++L
Sbjct: 398 IESASEVFGET--EQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALL 455
Query: 423 SACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
+AC H+G +D G F M ++P +KHY +VDMLGR+G L EA I++MP+ P+
Sbjct: 456 TACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPD 515
Query: 482 DSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRED 536
+WGAL ACR H + A N L +LEP HTG ++ +SN YAA +W + ++R
Sbjct: 516 FVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRVL 575
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCA 596
M+N+G+ K + +S IE + F + D + K + K+E + GY+P
Sbjct: 576 MQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIMAGAVKQGYIPGTEWV 635
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
LH++E E++E +L H EKLA+AF ++ +P +++ KNL+VC DCHS ++ S I +R
Sbjct: 636 LHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQR 695
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
+I++RD RFHHF+ G+CSC D+W
Sbjct: 696 EIMLRDMKRFHHFKDGSCSCRDHW 719
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/515 (38%), Positives = 322/515 (62%), Gaps = 7/515 (1%)
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
MS RD+ SWT +I Y Q + P+EAL L + + T S+ A G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H + + +D+ + ++++ MYARCG ++ A VFD +E ++ +SWN+++ G+ +
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G LL+F EMQ + + T + SA +G+ + G+ H ++I S ++ A +
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
N ++DMYAK G + A +F+ H ++++ +WN ++ + +G GR+A+ F +M + G
Sbjct: 181 NTILDMYAKSGSMIDARKVFD--HVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 238
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAF 470
V + ITF SIL+ACSH GL+ EG++ F M + +++PE+ HY +VD+LGRAG L +A
Sbjct: 239 VHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDAL 298
Query: 471 DMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASN 525
I +MP+ P +VWGALL +CR+H G+ AA+++F+L+P+ TG VL+ NIYA++
Sbjct: 299 VFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTG 358
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
+W ++R+ MK G+KK A S +E + F D +P +E+YKK E ++++I+
Sbjct: 359 QWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIR 418
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
AGY+P+ L V++++R+ L YHSEK+A+AF ++N+ A +++ KN+R+C DCHS
Sbjct: 419 KAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHS 478
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
AFR+IS ++ R+I+VRD NRFHHF G+CSC DYW
Sbjct: 479 AFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 171/320 (53%), Gaps = 1/320 (0%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W ++I YA N E L L M R N +TF +LKA +++ G+ +H +
Sbjct: 9 WTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 68
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ + D YV +AL+DMYA+CG+ D VFD++ ++ VSW +I + + E L+
Sbjct: 69 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 128
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
+F + Q+ G + T SV SA+ +G + + + VH + I + + N+I+ MYA
Sbjct: 129 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYA 188
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+ G++ AR VFD ++K+DL++WNSMLT + Q G EA+ F+EM+ N +T L
Sbjct: 189 KSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLS 248
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+++AC++ G + G+++ + N++ + V+D+ + G L+ A +F P +
Sbjct: 249 ILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDAL-VFIFKMPMK 307
Query: 378 RNVSSWNVLIAGYGMHGHGR 397
+ W L+ MH + +
Sbjct: 308 PTAAVWGALLGSCRMHKNAK 327
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M+R G F Y + + + +L Q +H+ + SG A +G I+ Y G
Sbjct: 133 MQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAF-VGNTILDMYAKSG 191
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
AR +F+ H DK WN+M+ A+A G E + + MR+ G+ N TF +
Sbjct: 192 SMIDARKVFD--HVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSI 249
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLS---DSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
L AC+ L+ EGK + D+++ L D YV +VD+ + G +D +M +
Sbjct: 250 LTACSHGGLVKEGK-QYFDMMKEHNLEPEIDHYV--TVVDLLGRAGLLNDALVFIFKMPM 306
Query: 174 R 174
+
Sbjct: 307 K 307
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/643 (34%), Positives = 356/643 (55%), Gaps = 10/643 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G +I Y+ G AR +F+ I + + W M+ Y+ N L +S MR
Sbjct: 185 VGTALIDAYSLCGAVCHARCVFDGIVGKDAVT--WTAMVSCYSENDIPEYALNTFSKMRM 242
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+G N + LKA S L GK +HG ++T + ++ +V AL+DMYAKCG +D
Sbjct: 243 TGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIED 302
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
+F+ + D++ W+ +I+ Y Q+ + E+A +F + + ++ + ++ V A
Sbjct: 303 AHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACAN 362
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ + + +H AI + +L + N+++ MYA+C N+E + +F ++ + +SWN++
Sbjct: 363 IAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTI 422
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ GY Q+G A +AL +F EM+ + VT ++ AC S + + H I S
Sbjct: 423 IVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTF 482
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
D + N+++D YAKCG + A +F I E +V SWN +I+ Y +HG ALE F
Sbjct: 483 NNDTIVCNSLIDTYAKCGFIRDALKVFESI--VECDVVSWNSIISAYALHGRATNALELF 540
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDMLGR 462
+M + +K + +TF S+LS C GL+++G F M +KP ++HY C+V +LGR
Sbjct: 541 DRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGR 600
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLM 517
AG L +A I +P P+ VW ALL +C +H G AA + +EP +VL+
Sbjct: 601 AGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLL 660
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SN+YAA+ EV R+ M+N G+KK A S +E ++ F +P + + +
Sbjct: 661 SNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAML 720
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
E + ++ GY+PD++ LHDV++E++ ML HSE+LA+A+G+ P +++ KNL
Sbjct: 721 EWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNL 780
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
R C DCH+ F+ IS I +R+IIVRD NRFHHFE G CSC DYW
Sbjct: 781 RSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 230/479 (48%), Gaps = 7/479 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
R +H+ + G + Q A +++ Y G TAR LF+ + SF+ T+++
Sbjct: 65 RAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFV--TLMQG 122
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
YA G E LEL+ ++R G N + +LK + +H + G +
Sbjct: 123 YALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRN 182
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
++V AL+D Y+ CG VFD + +D V+WT M++ Y + + PE AL F K +
Sbjct: 183 AFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRM 242
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G + + S A L L + +HG ++ + + + +++ MYA+CG++E
Sbjct: 243 TGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIED 302
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A +F+M+ D+I W+ +++ Y Q+ Q +A +F M S PN + ++ AC
Sbjct: 303 AHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACAN 362
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
+ +LG + H I + + + NA+MDMYAKC +++ + +F+ + + N SWN
Sbjct: 363 IAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQ--DANEVSWN 420
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
+I GY G AL F +M + +TF+S+L AC++ I + + + K
Sbjct: 421 TIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKS 480
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYL 503
+ + ++D + G + +A + + + + + W +++ A +HG A N L
Sbjct: 481 TFNNDTIVCNSLIDTYAKCGFIRDALKVFESI-VECDVVSWNSIISAYALHGR-ATNAL 537
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/737 (32%), Positives = 395/737 (53%), Gaps = 73/737 (9%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LK+C + + +IH L G + ++L ++ Y A +F+ +
Sbjct: 677 YSVALKTCTRVMDIWLGMEIHGCLIKRGF-DLDVYLRCALMNFYGRCWGLEKANQVFHEM 735
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
N ++ LWN I + + +EL+ M+ S + + + T VL+AC +
Sbjct: 736 PNPEA--LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNA 793
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY-- 186
K +HG + R G SD + L+ MY+K G+ + +VFD M R+ SW MI++Y
Sbjct: 794 AKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAA 853
Query: 187 --------------EQAE-KP------------------EEALILFQKTQQEGLLSDSVT 213
E ++ KP EE L + Q+ Q EG +S +
Sbjct: 854 LGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSS 913
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
+ SV A+ +LG + + HGY + N F D+ + S++ MY + ++ A+ VFD M+
Sbjct: 914 MTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMK 973
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT--ALI-------------- 317
R++ +WNS+++GY G +AL L ++M+ KP+ VT +I
Sbjct: 974 NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFM 1033
Query: 318 --------LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
L+ AC L Q G++ H I + D + A++DMY+K L A +
Sbjct: 1034 PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKV 1093
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F I + ++SWN +I G+ + G G++A+ F++M + GV PD ITFT++LSAC ++G
Sbjct: 1094 FRRIQ--NKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 1151
Query: 430 LIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
LI EG K F M T + P ++HY CMVD+LGRAG L EA+D+I MPL P+ ++WGAL
Sbjct: 1152 LIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGAL 1211
Query: 489 LLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L +CRIH E AA LF+LEP ++ ++LM N+Y+ N+W ++ LRE M G++
Sbjct: 1212 LGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVR 1271
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
+S I+ + + F + ++ +P ++Y ++ + E+K GY+PD++C ++++
Sbjct: 1272 NRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEV 1331
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
+++ +L H+EKLA+ +G++ + ++V KN R+C+DCHSA ++IS + R++ +RD
Sbjct: 1332 EKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDG 1391
Query: 664 NRFHHFEGGTCSCNDYW 680
RFHHF G CSCND+W
Sbjct: 1392 VRFHHFREGKCSCNDFW 1408
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 230/481 (47%), Gaps = 67/481 (13%)
Query: 78 WNTMIRAYANNGHCVE-TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN+ + + ++ + LE++ + G+ +S + LK C I G +HG +
Sbjct: 641 WNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCL 700
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
I+ GF D Y++ AL++ Y +C + +VF EM + + W I Q+EK ++ +
Sbjct: 701 IKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGV 760
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF+K Q L +++ TIV V A G++G + A+ +HGY D+ + N +++MY
Sbjct: 761 ELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMY 820
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
++ G +E AR VFD ME R+ SWNSM++ Y G ++A LF E+++SD KP+ VT
Sbjct: 821 SKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWN 880
Query: 317 ILVS-----------------------------------ACTYLGSRQLGRKFHGYIINS 341
L+S A + LG +G++ HGY++ +
Sbjct: 881 CLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRN 940
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
D + +++DMY K L +A+ +F+++ RN+ +WN L++GY G AL
Sbjct: 941 GFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNM--KNRNIFAWNSLVSGYSFKGMFEDALR 998
Query: 402 FFSQMLEEGVKPDHITF------------------------TSILSACSHAGLIDEGRKC 437
+QM +EG+KPD +T+ T +L AC+ L+ +G++
Sbjct: 999 LLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEI 1058
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV--WGALLLACRIH 495
+ +V ++DM ++ L A + +++ N ++ W +++ I
Sbjct: 1059 HCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI---QNKTLASWNCMIMGFAIF 1115
Query: 496 G 496
G
Sbjct: 1116 G 1116
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 145/346 (41%), Gaps = 19/346 (5%)
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G +S V + + G LG ++ + + D +N +++ Y G+ A
Sbjct: 574 GAISAGVDVFRFNTTCGMLGALVMIKLPQKWN------PDAAAKN-LISSYLGFGDFWSA 626
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQN-GQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
+VF + R+ + WNS + + + G L +F E+ + + + CT
Sbjct: 627 AMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTR 686
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
+ LG + HG +I +D LR A+M+ Y +C L+ A +F+++ E + WN
Sbjct: 687 VMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALL--WN 744
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
I +K +E F +M +K + T +L AC G ++ ++ + +
Sbjct: 745 EAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRF 804
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AANY 502
+ +V ++ M + G L A + M N S W +++ + G + A +
Sbjct: 805 GLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSSWNSMISSYAALGFLNDAWSL 863
Query: 503 LFQLE-----PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
++LE P+ + L+S + K EV + + M+ +G K
Sbjct: 864 FYELESSDMKPDIVTWNCLLSGHFLHGYK-EEVLNILQRMQGEGFK 908
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/552 (38%), Positives = 324/552 (58%), Gaps = 13/552 (2%)
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F SD ++ L++ YA G +VFDE V+++ W ++ A A+ +EAL
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLA 163
Query: 201 KTQQEGLLSDSVTIVS-----VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+ G+ DS + +A + + + VH +AI + + +++
Sbjct: 164 DMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDC 223
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK--PNPV 313
YA+ G V A VF M +R+++SW++M+ Y +N + ++A+ LF +M SD PN +
Sbjct: 224 YAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSI 283
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T + +++AC + + G+ H YI+ ++ NA+M MY +CG L+ ++F I
Sbjct: 284 TIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWI 343
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
R+V SWN LI+GYGMHG G +A++ F +M+ G P ITF S+L ACSHAGL++E
Sbjct: 344 -GHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNE 402
Query: 434 GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
G+ F M + V P +HYACMVD+LGRAG L EA ++I+ M + P+ VWGALL ACR
Sbjct: 403 GKMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACR 462
Query: 494 IHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
IHG EIA ++LF LEP + G +VL+++IYA + +VG L+E ++ L+K
Sbjct: 463 IHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHALEKVTGC 522
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S IE K + F + D NP +++ + ++K GY+PD L+D+E E++E +
Sbjct: 523 SWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIEGEEKERI 582
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
L HSEKLAVAFG++N V+++TKNLR+C DCHS +FIS R+I+VRD NRFHH
Sbjct: 583 LIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRDVNRFHH 642
Query: 669 FEGGTCSCNDYW 680
F G CSC DYW
Sbjct: 643 FRDGVCSCGDYW 654
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 185/376 (49%), Gaps = 11/376 (2%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H L + L ++I Y G AR +F+ F+WN +++A A
Sbjct: 94 VHRRLEADPVFRSDPFLSTRLIEAYAALGALPAARQVFDE--TPVKNIFVWNALLKALAL 151
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS-----LILEGKVVHGDIIRTGFL 142
H E L + M R G+ +SY++ LKAC + S + VH IR G+
Sbjct: 152 ADHGDEALARLADMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYA 211
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK- 201
++V L+D YAK G VF M R++VSW+ MI Y + E+P +A+ LF+
Sbjct: 212 LHTHVATTLIDCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDM 271
Query: 202 -TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
L+ +S+TIVSV +A + + + +H Y + F + + N+++AMY RCG
Sbjct: 272 MASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCG 331
Query: 261 NVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
+E R +F + +RD++SWNS+++GY +G EA+ +F+EM + P+ +T + ++
Sbjct: 332 CLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVL 391
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC++ G G+ ++ + A ++D+ + G LD A + +H E +
Sbjct: 392 GACSHAGLVNEGKMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMH-IEPS 450
Query: 380 VSSWNVLIAGYGMHGH 395
W L+ +HGH
Sbjct: 451 PQVWGALLGACRIHGH 466
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 14/238 (5%)
Query: 15 LLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L +C N L+ + +H+ + G + L A ++ Y G R +F I +
Sbjct: 288 VLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNA-LMAMYMRCGCLEVGRHIFKWIGHR 346
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ WN++I Y +G E ++++ M G S + TF VL AC+ L+ EGK+
Sbjct: 347 RDV-VSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEGKM 405
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS-WTVMITAYEQAE 190
+ ++ G + A +VD+ + GQ D+ ++ M + W ++ A
Sbjct: 406 LFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACRIHG 465
Query: 191 KPEEALI----LFQKTQQEG----LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
E A I LF + LL+D + + VG L ++L+ A+ C+
Sbjct: 466 HVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHALEKVTGCS 523
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/644 (34%), Positives = 356/644 (55%), Gaps = 15/644 (2%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y + AR LF+ + S+ N ++ Y ++G +E ++L+ M S
Sbjct: 61 LINLYVKCSKLRLARYLFDEMSLRSVVSY--NVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N Y F VL ACA + + EG HG + + G + +V+++LV MY+KC D +V
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQV 178
Query: 168 FDEM-----SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+ + D + ++ A ++ + EA+ + + EG++ DSVT VSV G
Sbjct: 179 LESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCG 238
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
Q+ D+ VH + D+ + + +V M+ +CG+V AR VFD ++ R+++ W S
Sbjct: 239 QIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTS 298
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
++T Y+QNG+ E L L M N T +L++A + + + G H +
Sbjct: 299 LMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLG 358
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+K + NA+++MY+KCG +D++ ++F D+ R++ +WN +I GY HG G++AL
Sbjct: 359 IKNRVIVGNALINMYSKCGCIDSSYDVFFDMR--NRDIITWNAMICGYSQHGLGKQALLL 416
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLG 461
F ML G P+H+TF +LSAC+H L++EG + K V+P ++HY C+V +L
Sbjct: 417 FQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLC 476
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA + ++ + + W LL AC IH G A + Q++P G + L
Sbjct: 477 RAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTL 536
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
+SN+YA + W V +R+ M+ + +KK S IE + F + +P ++Y K
Sbjct: 537 LSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNK 596
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
V+ + IK GY+P++ LHDVEDE +E LNYHSEKLA+A+G+M + A ++V KN
Sbjct: 597 VQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKN 656
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LR+C DCH+A + IS + R IIVRDA+RFHHF GTC+C D+W
Sbjct: 657 LRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 165/352 (46%), Gaps = 8/352 (2%)
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
+L+++Y KC + +FDEMS+R +VS+ V++ Y + + E + LF+
Sbjct: 60 SLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQP 119
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
+ +V SA G V + HG+ + +++S+V MY++C +V+ A V
Sbjct: 120 NEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVL 179
Query: 270 D-----MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
+ + D +NS+L +++G+ EA+ + M + + VT + ++ C
Sbjct: 180 ESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQ 239
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
+ LG + H ++ + D + + ++DM+ KCGD+ +A +F+ + RNV W
Sbjct: 240 IRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQ--NRNVVVWT 297
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
L+ Y +G + L S M EG + TF +L+A + + G A + KL
Sbjct: 298 SLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKL 357
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+K V +++M + GC+ ++D+ M + W A++ HG
Sbjct: 358 GIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR-NRDIITWNAMICGYSQHG 408
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 148/306 (48%), Gaps = 16/306 (5%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
NS++ +Y +C + AR +FD M R ++S+N ++ GY+ +G+ E + LF M +S +
Sbjct: 59 NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN ++SAC + G G + HG++ + ++++++ MY+KC +D A +
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQV 178
Query: 370 FNDIH---PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
H ++ + +N ++ G +A+E +M++EGV D +T+ S++ C
Sbjct: 179 LESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCG 238
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDS 483
+ G + A + K + +V + +VDM G+ G + A FD ++ N
Sbjct: 239 QIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQN----RNVV 294
Query: 484 VWGALLLACRIHGEI--AANYLFQLEPEHTG----YFVLMSNIYAASNKWREVGKLREDM 537
VW +L+ A +GE N L ++ E T F ++ N +A R L +
Sbjct: 295 VWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARV 354
Query: 538 KNKGLK 543
+ G+K
Sbjct: 355 EKLGIK 360
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/627 (34%), Positives = 358/627 (57%), Gaps = 11/627 (1%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF + N + +F N+++ Y+N G E +EL+ + SGI + +TF +L A
Sbjct: 194 ASQLFKHMLNKDTVTF--NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA 251
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
G+ VHG +++T F+ + +V AL+D Y+K Q D+ K+F EM D +S+
Sbjct: 252 VGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYN 311
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
V+IT+Y + +E+ LF+K Q ++ S ++ + +H AI
Sbjct: 312 VVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITV 371
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ ++N++V MYA+C ++A+ +FD + + + W +M++ Y+Q G+ E + +F
Sbjct: 372 GANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVF 431
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+M+ + + T ++ AC L S LGR+ H +I S + +A++D YAKC
Sbjct: 432 SDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKC 491
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G + A F ++ ERN SWN LI+ Y +G+ L F QM++ G KPD ++F S
Sbjct: 492 GCMTDAIKSFGEM--PERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLS 549
Query: 421 ILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSACSH G ++E F MT++ V P+ +HY MVD+L R G EA ++ +MP
Sbjct: 550 VLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFE 609
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKL 533
P++ +W ++L +CRIH + AA+ LF +E ++ MSNIYA + +W V K+
Sbjct: 610 PSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKV 669
Query: 534 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
++ M+++G++K A+S +E F D+ +P K++ +K+ +++ E++ GY PD
Sbjct: 670 KKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDT 729
Query: 594 SCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYI 653
+CALHDV++ + L YHSE+ A+AF +MN + + V KNLR C DCH+A + IS I
Sbjct: 730 TCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQI 789
Query: 654 YRRKIIVRDANRFHHFEGGTCSCNDYW 680
R+IIVRD++RFHHF+ G CSC DYW
Sbjct: 790 VEREIIVRDSSRFHHFKDGVCSCGDYW 816
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 216/454 (47%), Gaps = 11/454 (2%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I + +G+ + AR LF+ + + S W +I Y + E LY+ MRR GI
Sbjct: 80 MISGHLKFGKLSKARELFDGMVERTAVS--WTILIGGYLQSNQSKEAFRLYADMRRGGIE 137
Query: 108 SNSYTFPFVLKACA---SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG 164
+ T +L + ++I++ +H +I+ G+ + V +LVD Y K
Sbjct: 138 PDYVTLVTLLSGFGELETKNVIVQ---IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLA 194
Query: 165 CKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
++F M +D V++ ++T Y EEA+ LF + G+ T ++ SA L
Sbjct: 195 SQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGL 254
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
D Q VHG+ + F+ ++ + N+++ Y++ V++ +F M + D IS+N ++
Sbjct: 255 DDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVI 314
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
T Y NGQ E+ LF ++Q + L+S T + ++GR+ H I
Sbjct: 315 TSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGAN 374
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
++ + NA++DMYAKC A+ +F++I + ++ W +I+ Y G + + FS
Sbjct: 375 FESRVENALVDMYAKCNGDKEAQKIFDNI--ACKSTVPWTAMISAYVQKGKHEEGINVFS 432
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
M GV D TF SIL AC++ I GR+ + + + V + ++D + G
Sbjct: 433 DMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCG 492
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI 498
C+ +A +MP N W AL+ A +G +
Sbjct: 493 CMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNV 525
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 179/373 (47%), Gaps = 10/373 (2%)
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQA-ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
N+ + G +VH + + + + ++ + K G+ ++FD M R VSWT+
Sbjct: 51 NNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+I Y Q+ + +EA L+ ++ G+ D VT+V++ S G+L +H + I
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLG 170
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
+ +L + NS+V Y + + A +F M +D +++NS++TGY G EA+ LF
Sbjct: 171 YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFL 230
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
E+ NS KP+ T L+SA L + G++ HG+++ +N + + NA++D Y+K
Sbjct: 231 ELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHD 290
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+D +F ++ E + S+NV+I Y +G +++ + F ++ F ++
Sbjct: 291 QVDEVGKLFYEM--PELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATL 348
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPL 478
LS + + + GR+ + E + +VDM + EA FD I
Sbjct: 349 LSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 479 PPNDSVWGALLLA 491
P W A++ A
Sbjct: 409 VP----WTAMISA 417
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 35/231 (15%)
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT------- 285
+ + + F + C N V + G++ A VFD M ++ IS N M++
Sbjct: 30 IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89
Query: 286 ------------------------GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
GY+Q+ Q+ EA L+ +M+ +P+ VT + L+S
Sbjct: 90 LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
L ++ + + H ++I + + + N+++D Y K L A +F H ++
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK--HMLNKDTV 207
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
++N L+ GY G +A+E F ++ G+KP TF ++LSA GL D
Sbjct: 208 TFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAA--VGLDD 256
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/695 (34%), Positives = 364/695 (52%), Gaps = 85/695 (12%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L+ RQ H+ + +GL N HL K++ Y A + + + +SF +T+
Sbjct: 29 LSQTRQAHAHILKTGLFNDT-HLATKLLSHYANNMCFADATLVLDLVPEPNVFSF--STL 85
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I A++ L +S M G+ ++ P +KACA S + + VHG +GF
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY--------------- 186
SDS+VQ++LV MY KC Q D +VFD M D+VSW+ ++ AY
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205
Query: 187 --EQAEKP------------------EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+ +P EA+++F G D TI SV AVG L D
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL--------- 277
++ +HGY I + D C+ ++++ MY +C + VFD M+ D+
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 278 --------------------------ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+SW SM+ QNG+ EAL LF EMQ + KPN
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPN 385
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT L+ AC + + G+ H + + + D + +A++DMYAKCG + + F+
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFD 445
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
I P+ +N+ WN +IAGY MHG ++A+E F M G KPD I+FT +LSACS +GL
Sbjct: 446 GI-PT-KNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLT 503
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F M+ K ++ V+HYACMV +L RAG L +A+ MI++MP+ P+ VWGALL
Sbjct: 504 EEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
+CR+H GE+AA LF+LEP + G ++L+SNIYA+ W EV ++R+ MKNKGL+K
Sbjct: 564 SCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + D+ +P ++ + ++ +++E+K GY P+++ L DVE++D+
Sbjct: 624 PGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDK 683
Query: 606 EHMLNYHSEKLAVAFGIMNLTP----EAVVQVTKN 636
E +L HSEKLAV FG++N P ++ +Q TK
Sbjct: 684 EQILCGHSEKLAVVFGLLNTPPGYPLQSEIQATKQ 718
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/634 (34%), Positives = 359/634 (56%), Gaps = 14/634 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C L L+ Q+HS L +G+ + + G+ + + Y G+ TA +FNS +D
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL-YVKCGDVETALVIFNS--SD 306
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
++ LWN M+ A+ ++ EL+ M+ +GI N +T+P +L+ C I G+
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++TGF SD YV L+DMY+K G + +V + + +D+VSWT MI Y Q E
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
++AL F++ Q+ G+ D++ + S S + + + +H + + D+ I N+
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V +YARCG + +A F+ +E +D I+WN +++G+ Q+G EAL +F M S K N
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHN 546
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + +SA L + G++ H +I + + + NA++ +Y KCG + A+ F+
Sbjct: 547 VFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFS 606
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ SERN SWN +I HG G +AL+ F QM +EG+KP+ +TF +L+ACSH GL+
Sbjct: 607 EM--SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F M+ + ++P HYAC++D+ GRAG L A I++MP+ + VW LL
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC++H GE AA +L +LEP + +VL+SN YA + KW ++R+ M+++G++K
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE 784
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F DR++P +++Y + + + GY + HD E E R
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGR 844
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ HSEKLAV FG+M+L P ++V KNLRV
Sbjct: 845 DPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 232/463 (50%), Gaps = 6/463 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+IH+ T GL + +G +I Y+ G AR +F + + S W M+ YA
Sbjct: 63 EIHAKAVTRGLGKYRI-VGNLLIDLYSKNGLVLPARRVFEELSARDNVS--WVAMLSGYA 119
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG E L LY M R+G+ Y VL +C L +G+++H + GF S+ +
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V A++ +Y +CG +VF +M RD V++ +I+ + Q E AL +F++ Q G
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L D VTI S+ +A LGD+ K +H Y D ++ S++ +Y +CG+VE A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
++F+ ++ +++ WN ML + Q +++ LF +MQ + +PN T ++ CT
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
LG + H + + + D + ++DMY+K G L+ A + + E++V SW +
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML--KEKDVVSWTSM 417
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
IAGY H + AL F +M + G+ PD+I S +S C+ + +G + A +
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+V + +V++ R G + EAF +++ ++ W L+
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIE-HKDEITWNGLV 519
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR-QL 330
M +R S L G++ + ++ L LF + P+ + AC G R Q+
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
+ H + + + N ++D+Y+K G + A +F ++ S R+ SW +++GY
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL--SARDNVSWVAMLSGY 118
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+G G +AL + QM GV P +S+LS+C+ A L +GR A K E+
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMP 477
++ + R G A + MP
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMP 205
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/584 (36%), Positives = 338/584 (57%), Gaps = 19/584 (3%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L+ ++IHS + +G +N L + +I Y+ + N A S+F+ ++ + F +N +
Sbjct: 53 LSKGKEIHSYMLINGFLNSPLSI-TSLINMYSKCNQMNFALSIFSDPTHEINV-FAFNAI 110
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I + NG E E Y MR G+ + +TFP +KAC +LE K +HG + + G
Sbjct: 111 ISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLD---VLEIKKIHGLLFKFGL 167
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D ++ +ALV+ Y K G + F+E+ +RD+V W M+ Y Q + E L F++
Sbjct: 168 ELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRR 227
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
E ++ T+ V S +GD+ + +HG+A+ + + + NS++ MY +C
Sbjct: 228 MNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKC 287
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+E A +F+MM ++D+ SWNS+++ + Q G L L D M + +P+ VT ++ A
Sbjct: 288 IEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPA 347
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDAT------LRNAVMDMYAKCGDLDTAENMFNDIHP 375
C++L + GR+ HGY+I S + D L+NAV+DMYAKCG + A +F +
Sbjct: 348 CSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERM-- 405
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
S ++V+SWN++I GYGMHG+G +ALE FS+M E +KPD +TF +LSACSHAG + +GR
Sbjct: 406 SNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGR 465
Query: 436 KCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
M +K V P ++HY C++DMLGRAG L EA+++ MP+ N VW ALL ACR+
Sbjct: 466 NFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRL 525
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H E+AA +F+LEPEH G +VLMSN+Y A ++ EV ++R M+ + ++K S
Sbjct: 526 HKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCS 585
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
IE + F +ADR +P +Y + S+ ++ GY+PD+
Sbjct: 586 WIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGYVPDV 629
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 189/387 (48%), Gaps = 13/387 (3%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF-DEMSVRD 175
L+A A + + +GK +H ++ GFL+ +L++MY+KC Q + +F D +
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+ ++ +I+ + PEE +QK + EG++ D T A+ DVL+ + +HG
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTF---PCAIKACLDVLEIKKIHG 160
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
D+ I +++V Y + G +E A++ F+ + RD++ WN+M+ GY Q GQ
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
L F M + P+ T ++S +G GR HG+ + + N+++D
Sbjct: 221 VLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KC ++ A +F + E+++ SWN +++ + G L +ML G++PD
Sbjct: 281 MYGKCKCIEDALEIFEMMR--EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDL 338
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY------ACMVDMLGRAGCLYEA 469
+T T++L ACSH + GR+ M + + K ++DM + G + +A
Sbjct: 339 VTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDA 398
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIHG 496
+ ++M + + W +++ +HG
Sbjct: 399 HLVFERMS-NKDVASWNIMIMGYGMHG 424
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 130/265 (49%), Gaps = 6/265 (2%)
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF-DM 271
T ++ A ++ K + +H Y + N FL S++ MY++C + A +F D
Sbjct: 39 TCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDP 98
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ ++ ++N++++G+I NG E + +M+N P+ T + AC L ++
Sbjct: 99 THEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC--LDVLEI- 155
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+K HG + +++D + +A+++ Y K G ++ A+ F ++ R+V WN ++ GY
Sbjct: 156 KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL--PIRDVVLWNAMVNGYA 213
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
G LE F +M +E V P T T +LS + G ++ GR K+ V
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQM 476
++DM G+ C+ +A ++ + M
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMM 298
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 92/180 (51%), Gaps = 7/180 (3%)
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N T + + A + + G++ H Y++ + ++++MY+KC ++ A ++F
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF 95
Query: 371 NDIHPS-ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
+D P+ E NV ++N +I+G+ +G + EF+ +M EGV PD TF + AC
Sbjct: 96 SD--PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLD-- 151
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ E +K + K ++ +V + +V+ + G + A +++P+ + +W A++
Sbjct: 152 -VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI-RDVVLWNAMV 209
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/646 (33%), Positives = 359/646 (55%), Gaps = 45/646 (6%)
Query: 78 WNTMIRAYANNGHCVE-TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN+ + + ++ + LE++ + G+ +S + LK C I G +HG +
Sbjct: 490 WNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCL 549
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
I+ GF D Y++ AL++ Y +C + +VF EM + + W I Q+EK ++ +
Sbjct: 550 IKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGV 609
Query: 197 ILFQKTQQEGLLSDSVTIVSVASA-VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
LF+K Q L +++ TIV V A + +LG + + HGY + N F D+ + S++ M
Sbjct: 610 ELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDM 669
Query: 256 YARCGNVEKARLVFDMMEKR-----------------------------------DLISW 280
Y + ++ A+ VFD M+ R DL++W
Sbjct: 670 YVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTW 729
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N M++GY G EAL F +MQ PN + L+ AC L Q G++ H I
Sbjct: 730 NGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIR 789
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ D + A++DMY+K L A +F I + ++SWN +I G+ + G G++A+
Sbjct: 790 NGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ--NKTLASWNCMIMGFAIFGLGKEAI 847
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDM 459
F++M + GV PD ITFT++LSAC ++GLI EG K F M T + P ++HY CMVD+
Sbjct: 848 SVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDL 907
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYF 514
LGRAG L EA+D+I MPL P+ ++WGALL +CRIH E AA LF+LEP ++ +
Sbjct: 908 LGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANY 967
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
+LM N+Y+ N+W ++ LRE M G++ +S I+ + + F + ++ +P ++Y
Sbjct: 968 ILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIY 1027
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
++ + E+K GY+PD++C ++++ +++ +L H+EKLA+ +G++ + ++V
Sbjct: 1028 FELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVI 1087
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KN R+C+DCHSA ++IS + R++ +RD RFHHF G CSCND+W
Sbjct: 1088 KNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 193/423 (45%), Gaps = 46/423 (10%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LK+C + + +IH L G + ++L ++ Y A +F+ +
Sbjct: 526 YSVALKTCTRVMDIWLGMEIHGCLIKRGF-DLDVYLRCALMNFYGRCWGLEKANQVFHEM 584
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
N ++ LWN I + + +EL+ M+ S + + + T VL+A S L
Sbjct: 585 PNPEA--LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLN 642
Query: 129 -GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR------------- 174
GK HG ++R GF D YV +L+DMY K VFD M R
Sbjct: 643 MGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYS 702
Query: 175 ----------------------DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
DLV+W MI+ Y +EAL F + QQEG++ +S
Sbjct: 703 FKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSA 762
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
+I + A L + K + +H +I N F+ED+ + +++ MY++ +++ A VF +
Sbjct: 763 SITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI 822
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
+ + L SWN M+ G+ G EA+ +F+EMQ P+ +T L+SAC G G
Sbjct: 823 QNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGW 882
Query: 333 KFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
K+ +I ++ +I L + ++D+ + G LD A ++ + + P + + + W L+
Sbjct: 883 KYFDSMI-TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTM-PLKPDATIWGALLGSC 940
Query: 391 GMH 393
+H
Sbjct: 941 RIH 943
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 148/309 (47%), Gaps = 4/309 (1%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ-AEKPEEALILFQKTQQEGLLS 209
L+ Y G VF R+ + W + ++ A L +F++ +G++
Sbjct: 462 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 521
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
DS ++ D+ +HG I F D+ ++ +++ Y RC +EKA VF
Sbjct: 522 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 581
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL-ILVSACTYLGSR 328
M + + WN + +Q+ + + + LF +MQ S K T + +L ++ + LG
Sbjct: 582 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFL 641
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+G++ HGY++ + D + +++DMY K L +A+ +F+++ RN+ +WN L++
Sbjct: 642 NMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNM--KNRNIFAWNSLVS 699
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
GY G AL +QM +EG+KPD +T+ ++S + G E FA M + V P
Sbjct: 700 GYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMP 759
Query: 449 EVKHYACMV 457
C++
Sbjct: 760 NSASITCLL 768
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 13/267 (4%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN-GQASEALLLFDEMQNSDC 308
++++ Y G+ A +VF + R+ + WNS + + + G L +F E+
Sbjct: 460 KNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGV 519
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+ + + CT + LG + HG +I +D LR A+M+ Y +C L+ A
Sbjct: 520 VFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQ 579
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC-SH 427
+F+++ E + WN I +K +E F +M +K + T +L A S
Sbjct: 580 VFHEMPNPEALL--WNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISE 637
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV 484
G ++ G++ + + +V ++DM + L A FD +K N
Sbjct: 638 LGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR----NIFA 693
Query: 485 WGALLLACRIHG--EIAANYLFQLEPE 509
W +L+ G E A L Q+E E
Sbjct: 694 WNSLVSGYSFKGMFEDALRLLNQMEKE 720
>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Glycine max]
Length = 600
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/603 (37%), Positives = 348/603 (57%), Gaps = 13/603 (2%)
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ + H E M G+ N + VL C S EG+ VH I+T +L
Sbjct: 2 STHSHDTHLREALIQMTLXGLDMNLQDYNTVLNECVSKRAFKEGQRVHAHTIKTHYLPCV 61
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
Y+ L+ Y KC D V +EM R++VSWT MI+AY Q +AL + + +
Sbjct: 62 YLWTRLIVFYTKCDSLGDARHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRS 121
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G S+ T ++ + + +A+H I F + + +S++ MYA+ G + +A
Sbjct: 122 GTESNEFTFATMPYFMYRFLGFCLREAIHSLIIKLNFKAHVYVGSSLLDMYAKDGKIHEA 181
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R +F+ + +RD++S ++++GY Q E L LF +Q N VT +++A + L
Sbjct: 182 RGIFECLPERDVVSCTAIISGYAQL-DLDEELELFLRLQREGMXSNYVTYTSVLTALSGL 240
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ G++ H +++ S + L+N+++DMY+KCG+L A +F+ + ER V SWN
Sbjct: 241 AALDHGKQVHNHLLCSEVPSFVILQNSLIDMYSKCGNLTYARRIFDTMR--ERTVISWNA 298
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKCFADMT-- 442
++ GY HG R+ LE F+ M +E VKPD +T ++LS CSH G D+G F DMT
Sbjct: 299 MLVGYSKHGERREVLELFNLMRDENKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSG 358
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GE 497
K+SV+P+ K Y C+VD+LGRAG + EAF+ IK++P P+ ++ G LL AC +H GE
Sbjct: 359 KISVQPDTKRYGCVVDLLGRAGRVEEAFEFIKKIPFEPSAAICGCLLGACSVHSNLGIGE 418
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+ L + EPE+ G +V++SN+YA++ +W +V LR M K + K S+IE + +
Sbjct: 419 FVGHRLLEFEPENAGNYVILSNLYASAGRWEDVTSLRNLMLKKAVTKEPGRSLIEVDQVL 478
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
Q FH +D +P +EV K + + V K AGY PDLSC LHDV++E +E +L HSEKLA
Sbjct: 479 QTFHPSDCSHPRREEVSAKXQELLVRFKEAGYFPDLSCVLHDVDEEQKEKILLSHSEKLA 538
Query: 618 VAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
++FG++ TPE+V + V KNLR+C DCH+ ++IS IY R++ +RD N FH G CSC
Sbjct: 539 LSFGLIA-TPESVLICVIKNLRICVDCHNFAKYISKIYSREVSLRDKNWFHGIVGEKCSC 597
Query: 677 NDY 679
DY
Sbjct: 598 GDY 600
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 195/374 (52%), Gaps = 20/374 (5%)
Query: 42 LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM 101
++L ++I+ YT AR + N + S W MI AY+ G+ + L + +
Sbjct: 61 VYLWTRLIVFYTKCDSLGDARHVLNEMPERNVVS--WTAMISAYSQRGYASQALSILVQI 118
Query: 102 RRSGISSNSYTF---PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC 158
RSG SN +TF P+ + L + +H II+ F + YV ++L+DMYAK
Sbjct: 119 LRSGTESNEFTFATMPYFMYRFLGFCL---REAIHSLIIKLNFKAHVYVGSSLLDMYAKD 175
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
G+ + +F+ + RD+VS T +I+ Y Q + EE L LF + Q+EG+ S+ VT SV
Sbjct: 176 GKIHEARGIFECLPERDVVSCTAIISGYAQLDLDEE-LELFLRLQREGMXSNYVTYTSVL 234
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
+A+ L + + VH + +C+ + +QNS++ MY++CGN+ AR +FD M +R +I
Sbjct: 235 TALSGLAALDHGKQVHNHLLCSEVPSFVILQNSLIDMYSKCGNLTYARRIFDTMRERTVI 294
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGY 337
SWN+ML GY ++G+ E L LF+ M++ + KP+ VT L ++S C++ G G
Sbjct: 295 SWNAMLVGYSKHGERREVLELFNLMRDENKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYD 354
Query: 338 IINSNMKI--DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ + + + D V+D+ + G ++ A I P E + + L+ +H +
Sbjct: 355 MTSGKISVQPDTKRYGCVVDLLGRAGRVEEAFEFIKKI-PFEPSAAICGCLLGACSVHSN 413
Query: 396 -------GRKALEF 402
G + LEF
Sbjct: 414 LGIGEFVGHRLLEF 427
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 363/652 (55%), Gaps = 13/652 (1%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
+++ L L ++ Y+ G A+ +F +N S WNTM+ ++ G T ++
Sbjct: 73 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS--WNTMVGGFSAEGDTHGTFDV 130
Query: 98 YSTMRRSG--ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
M G + ++ T + C S + K +H ++ F+ + V A V Y
Sbjct: 131 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 190
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
AKCG +VF + + + SW +I + Q+ P +L + + GLL DS T+
Sbjct: 191 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 250
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
S+ SA +L + + VHG+ I N DL + S++++Y CG + + +FD ME +
Sbjct: 251 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 310
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
L+SWN+++TGY+QNG AL +F +M + ++ + + AC+ L S +LGR+ H
Sbjct: 311 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 370
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
Y + ++ DA + +++DMYAK G + + +FN + E++ +SWN +I GYG+HG
Sbjct: 371 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL--KEKSTASWNAMIMGYGIHGL 428
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
++A++ F +M G PD +TF +L+AC+H+GLI EG + M + +KP +KHYA
Sbjct: 429 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 488
Query: 455 CMVDMLGRAGCLYEAFDMI-KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEP 508
C++DMLGRAG L +A ++ ++M + +W +LL +CRIH GE A LF+LEP
Sbjct: 489 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 548
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
E +VL+SN+YA KW +V K+R+ M L+K A S IE + + F +R
Sbjct: 549 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 608
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
++E+ + ++I GY PD HD+ +E++ L HSEKLA+ +G++ +
Sbjct: 609 GFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEG 668
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLR+C DCH+A + IS + R+I+VRD RFHHF+ G CSC DYW
Sbjct: 669 TTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 219/443 (49%), Gaps = 11/443 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRR----SGISSNSYTFPFVLKACASNSLILEGKVVH 133
WN+MIR +++NG E+ L M + T VL CA I GK VH
Sbjct: 6 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 65
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G ++ + + AL+DMY+KCG + +F + +++VSW M+ +
Sbjct: 66 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 125
Query: 194 EALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ ++ E + +D VTI++ + + +H Y++ F+ + + N+
Sbjct: 126 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 185
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
VA YA+CG++ A+ VF + + + SWN+++ G+ Q+ +L +M+ S P+
Sbjct: 186 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 245
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T L+SAC+ L S +LG++ HG+II + ++ D + +V+ +Y CG+L T + +F+
Sbjct: 246 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 305
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ++++ SWN +I GY +G +AL F QM+ G++ I+ + ACS +
Sbjct: 306 AME--DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 363
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
GR+ A K ++ + ++DM + G + ++ + + S W A+++
Sbjct: 364 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMG 422
Query: 492 CRIHG-EIAANYLFQLEPEHTGY 513
IHG A LF+ E + TG+
Sbjct: 423 YGIHGLAKEAIKLFE-EMQRTGH 444
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 129/259 (49%), Gaps = 8/259 (3%)
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQE----GLLSDSVTIVSVASAVGQLGDVLK 229
R+ VSW MI + EE+ +L + +E + D T+V+V + ++
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
+ VHG+A+ ++L + N+++ MY++CG + A+++F M ++++SWN+M+ G+
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 290 NGQASEALLLFDEM--QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
G + +M D K + VT L V C + ++ H Y + +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ NA + YAKCG L A+ +F+ I + V+SWN LI G+ R +L+ QM
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRS--KTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238
Query: 408 EEGVKPDHITFTSILSACS 426
G+ PD T S+LSACS
Sbjct: 239 ISGLLPDSFTVCSLLSACS 257
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/605 (35%), Positives = 338/605 (55%), Gaps = 41/605 (6%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
+ L+ACA + GK +H II+TG + L++MY KCG D +F+++ R
Sbjct: 8 YQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHR 67
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKT-QQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
D +SW ++TA QA P L +F +Q+GL D + A LG + + + V
Sbjct: 68 DPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQV 127
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H I + +D +++S+V MYA+CG + R+VFD + ++ ISW +M++GY Q+G+
Sbjct: 128 HATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRK 187
Query: 294 SEALLLFDEMQNSDCKP--------------------------------NPVTALILVSA 321
+A+ LF +M + +P ++ A
Sbjct: 188 LDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGA 247
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
L LG++ H +I + + NA++DMYAKC D+ A+ +F + +R++
Sbjct: 248 SANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRM--VQRDIV 305
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SW +I G HG +AL +++ML G+KP+ +TF ++ ACSH GL+ +GR F M
Sbjct: 306 SWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSM 365
Query: 442 TK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
K + P ++HY C++D+L R+G L EA ++IK MP P+++ W ALL AC H
Sbjct: 366 IKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLI 425
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G A++L L+PE ++L+SNIYA++ W V K+R M +KK +S I GK
Sbjct: 426 GIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGK 485
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ Q F + +P +E++ +E + E+K GY+PD S LHD+E +++E L +HSE+
Sbjct: 486 ESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSER 545
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVA+G++ P V+ + KNLRVC DCH+ +FIS I +R+I+VRDANR+HHF+ G CS
Sbjct: 546 LAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCS 605
Query: 676 CNDYW 680
CN++W
Sbjct: 606 CNNFW 610
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 246/501 (49%), Gaps = 54/501 (10%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA- 84
+++H + +G I+Q L +I Y G A +LFN + + S W +++ A
Sbjct: 23 KKLHCHIIKTG-IDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPIS--WASILTAN 79
Query: 85 -YANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL 142
AN H TL ++ M ++ G+ + Y F ++KACA + +GK VH I +
Sbjct: 80 NQANLPHL--TLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVS 137
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
D V+++LVDMYAKCG D G VFD +S ++ +SWT MI+ Y Q+ + +A+ LFQK
Sbjct: 138 DDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKM 197
Query: 203 QQEGLLS--------------------------------DSVTIVSVASAVGQLGDVLKA 230
+ LLS D + S+ A L +
Sbjct: 198 PVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLG 257
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H I + L + N++V MYA+C +V A+ +F M +RD++SW S++ G Q+
Sbjct: 258 KQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQH 317
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G A EAL L++ M ++ KPN VT + L+ AC+++G GR F +I + I+ +L+
Sbjct: 318 GLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIK-DYGINPSLQ 376
Query: 351 N--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ ++D+ ++ G L+ AEN+ + P + + ++W L++ H + + +L
Sbjct: 377 HYTCLLDLLSRSGHLEEAENLIKAM-PFKPDEATWAALLSACNHHRNTLIGIRVADHLLS 435
Query: 409 EGVKP-DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
+KP D T+ + + + A + + K M + VK E Y+C+V LG+ ++
Sbjct: 436 --LKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKE-PGYSCIV--LGKESQVF 490
Query: 468 EAFDMIKQMPLPPNDSVWGAL 488
A + P + ++G L
Sbjct: 491 LA----GETSHPAKEEIFGLL 507
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 337/609 (55%), Gaps = 9/609 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
MI AY +G L+ Y MR G+ +++T+ +L AC+S +L+GK +H I+
Sbjct: 139 TAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILE 198
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
+ + V+ AL+ MYAKCG D +F M V+D+VSW MI AY ++A L
Sbjct: 199 SKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSL 258
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F + G D T S+ A + + +H F D +QN++++M+ R
Sbjct: 259 FHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTR 318
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG++E AR F +EK++L +WN+ML Y Q + +AL L+ M P+ T +
Sbjct: 319 CGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSV 378
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
V +C LG+ + G+ H + + D L A+++MYAKCG L A+ F+ I S +
Sbjct: 379 VDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGI--SNK 436
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V SW+ +IA HGH +ALE M +G+ + +T +S+L ACSH G + EG F
Sbjct: 437 DVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYF 496
Query: 439 ADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+++ ++ + ++ +D+LGRAG L EA ++ MP + LL C++HG+
Sbjct: 497 MGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGD 556
Query: 498 IA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
+ + LEPE+ G +VL++N+YAA+ +W +V KLR M+ KG+K+ S IE
Sbjct: 557 VRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIE 616
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDVEDEDREHMLNY 611
Y I F D NP E+ ++E + +K GY+PD HDV D+ +E +L +
Sbjct: 617 YRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKF 676
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSEK+A+ FG++ P + +++ KNLRVC+DCH+ + S I R+IIVRD RFHHFEG
Sbjct: 677 HSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEG 736
Query: 672 GTCSCNDYW 680
G CSC DYW
Sbjct: 737 GICSCGDYW 745
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 225/457 (49%), Gaps = 12/457 (2%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
L II Y P AR +F+ I ++S W+ ++ Y N E LE+Y M R
Sbjct: 4 LANMIIQMYGKCKSPEDARQVFDRIKQRNAFS--WSILVECYVQNAMYQEALEVYKEMVR 61
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
IS ++YT VL AC + EG++V GF D V +L+ ++AKCG ++
Sbjct: 62 KEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEE 121
Query: 164 GCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
VF M ++RD++S T MI AY + K + AL + K + +GL D+ T ++ A
Sbjct: 122 AESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACS 181
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
+L + +H + + + ++ ++N+++ MYA+CG+++ ++ +F M+ +D++SWN+
Sbjct: 182 SPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNA 241
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ Y G +A LF M P+ T ++ AC + GR H I
Sbjct: 242 MIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARG 301
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
D ++N ++ M+ +CG L++A F I E + +WN ++A Y G+ AL
Sbjct: 302 FDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKE--LGAWNTMLAAYAQFDKGKDALFL 359
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
+ ML EG PD TF+S++ +C+ G + EG+ T + +V +V+M +
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAK 419
Query: 463 AGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHG 496
G L +A FD I + W A++ A HG
Sbjct: 420 CGSLADAKKSFDGISNKDVVS----WSAMIAASAQHG 452
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 188/352 (53%), Gaps = 10/352 (2%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D+++ ++ MY KC +D +VFD + R+ SW++++ Y Q +EAL ++++
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
++ + D+ T+ SV +A +L DV + + V A F +D+ + S++ ++A+CG +E
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 264 KARLVF-DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
+A VF M RD+IS +M+ Y+++G+ AL + +M++ +P+ T ++ AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ G+ H +I+ S + ++RNA++ MYAKCG L ++++F + ++V S
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLF--LTMDVKDVVS 238
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
WN +IA Y ++GH + A F +M G PD TF+SIL AC+ +++GR +T
Sbjct: 239 WNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRIT 298
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLA 491
+ ++ M R G L A F I++ L W +L A
Sbjct: 299 ARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKEL----GAWNTMLAA 346
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 196/404 (48%), Gaps = 9/404 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
MR G + F Y +L +C +FL + IH + S + + +I Y G
Sbjct: 161 MRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGN-ISVRNALITMYAKCG 219
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
++SLF ++ S WN MI AY GH + L+ M G + + YTF +
Sbjct: 220 SLKDSKSLFLTMDVKDVVS--WNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSI 277
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L ACAS + +G+++H I GF D +Q L+ M+ +CG + + F + ++L
Sbjct: 278 LGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKEL 337
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
+W M+ AY Q +K ++AL L++ EG D T SV + LG + + + +H
Sbjct: 338 GAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHEC 397
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ F +D+ + ++V MYA+CG++ A+ FD + +D++SW++M+ Q+G A EA
Sbjct: 398 STSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEA 457
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMD 355
L L M N VTA ++ AC++ G G F G + ++ D +D
Sbjct: 458 LELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFID 517
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ + G L AE++ + + P + + + L+ G +HG R+
Sbjct: 518 LLGRAGWLKEAEHVLHTM-PFKVSFVALVTLLGGCKVHGDVRRG 560
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 129/258 (50%), Gaps = 14/258 (5%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D + N I+ MY +C + E AR VFD +++R+ SW+ ++ Y+QN EAL ++ EM
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ + T +++ACT L + GR + D + +++ ++AKCG L+
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
AE++F + + R++ S +I Y HG AL+ + +M +G++PD T+ +IL A
Sbjct: 121 EAESVFRSM-GAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGA 179
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYA------CMVDMLGRAGCLYEAFDMIKQMPL 478
CS + +G+ + E KH+ ++ M + G L ++ + M +
Sbjct: 180 CSSPDFLLDGKHIHKHIL------ESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDV 233
Query: 479 PPNDSVWGALLLACRIHG 496
S W A++ A ++G
Sbjct: 234 KDVVS-WNAMIAAYTLYG 250
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 363/652 (55%), Gaps = 13/652 (1%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
+++ L L ++ Y+ G A+ +F +N S WNTM+ ++ G T ++
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS--WNTMVGGFSAEGDTHGTFDV 380
Query: 98 YSTMRRSG--ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
M G + ++ T + C S + K +H ++ F+ + V A V Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
AKCG +VF + + + SW +I + Q+ P +L + + GLL DS T+
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
S+ SA +L + + VHG+ I N DL + S++++Y CG + + +FD ME +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
L+SWN+++TGY+QNG AL +F +M + ++ + + AC+ L S +LGR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
Y + ++ DA + +++DMYAK G + + +FN + E++ +SWN +I GYG+HG
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL--KEKSTASWNAMIMGYGIHGL 678
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
++A++ F +M G PD +TF +L+AC+H+GLI EG + M + +KP +KHYA
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 738
Query: 455 CMVDMLGRAGCLYEAFDMI-KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEP 508
C++DMLGRAG L +A ++ ++M + +W +LL +CRIH GE A LF+LEP
Sbjct: 739 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 798
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
E +VL+SN+YA KW +V K+R+ M L+K A S IE + + F +R
Sbjct: 799 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 858
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
++E+ + ++I GY PD HD+ +E++ L HSEKLA+ +G++ +
Sbjct: 859 GFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEG 918
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLR+C DCH+A + IS + R+I+VRD RFHHF+ G CSC DYW
Sbjct: 919 TTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 207/408 (50%), Gaps = 11/408 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH ++ S + L +II Y G P+ +R +F+++ + F WN +I +Y
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNL--FQWNAVISSY 161
Query: 86 ANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ N E LE + M + + + +T+P V+KACA S + G VHG +++TG + D
Sbjct: 162 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED 221
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V ALV Y G D ++FD M R+LVSW MI + EE+ +L + +
Sbjct: 222 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 281
Query: 205 E----GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
E + D T+V+V + ++ + VHG+A+ ++L + N+++ MY++CG
Sbjct: 282 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 341
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPVTALIL 318
+ A+++F M ++++SWN+M+ G+ G + +M D K + VT L
Sbjct: 342 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 401
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
V C + ++ H Y + + + NA + YAKCG L A+ +F+ I +
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS--K 459
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
V+SWN LI G+ R +L+ QM G+ PD T S+LSACS
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/690 (33%), Positives = 386/690 (55%), Gaps = 33/690 (4%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
L+ +C L +L R++H L +G + L ++ Y G + A+ +F + +
Sbjct: 16 LVAACTKLQALEEGRRLHEHLIITGFRTD-IPLETALLQMYAKCGSLDDAKRVFEGM--E 72
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
F W+++I AYA G + LY M G+ N TF L CAS + + +G+
Sbjct: 73 IKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRA 132
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ + D +Q +L++MY KC + + KVF+ M R++ S+T MI+AY QA +
Sbjct: 133 IHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGE 192
Query: 192 PEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EAL LF + ++ E + ++ T ++ AV LG++ K + VH + F ++ +QN
Sbjct: 193 HAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQN 252
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MY +CG+ +AR VFD M R++ISW SM+ Y Q+G EAL LF M D +P
Sbjct: 253 ALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEP 309
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ V+ ++AC LG+ GR+ H ++ +++ + +++ MYA+CG LD A +F
Sbjct: 310 SGVSFSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARCGSLDDARRVF 368
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
N + R+ S N +IA + HG ++AL + +M +EG+ D ITF S+L ACSH L
Sbjct: 369 NRM--KTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSL 426
Query: 431 IDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ + R F + V P V+HY CMVD+LGR+G L +A ++++ MP + W LL
Sbjct: 427 VADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLL 486
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
C+ HG++ AA +F+L P T +V +SN+YAA+ ++ + ++R++M+ +G+
Sbjct: 487 SGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTT 546
Query: 545 PAAFSVIEYGKDIQGFHTADR---VNPYWKEVYKKVESMAVEI----KMAGYMPDLSCAL 597
P A S IE ++ F + R + ++V S+ +E+ K AGY+PD
Sbjct: 547 PVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGYVPDTREVY 606
Query: 598 HDVE----DEDREHMLNYHSEKLAVAFGIM---NLTPEAVVQVTKNLRVCNDCHSAFRFI 650
+ + +E+++ L +HSE+LA+A+G++ + ++V + RVC+DCHSA + +
Sbjct: 607 LEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSDCHSAIKLL 666
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S I + I VRD NRFHHFE G CSC D+W
Sbjct: 667 SDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 214/378 (56%), Gaps = 9/378 (2%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M GI ++ + ++ AC + EG+ +H +I TGF +D ++ AL+ MYAKCG
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
DD +VF+ M ++DL +W+ +I+AY +A + E A++L+++ EG+ + VT
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
+ + +A+H + + +D +Q+S++ MY +C + +AR VF+ M+ R++ S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDC-KPNPVTALILVSACTYLGSRQLGRKFHGYII 339
+M++ Y+Q G+ +EAL LF M + +PN T ++ A LG+ + GRK H ++
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ + ++NA++ MY KCG A +F+ + + RNV SW +IA Y HG+ ++A
Sbjct: 241 SRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSM--TARNVISWTSMIAAYAQHGNPQEA 298
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV-KPEVKHYACMVD 458
L F +M V+P ++F+S L+AC+ G +DEGR+ + + + P+++ ++
Sbjct: 299 LNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLS 353
Query: 459 MLGRAGCLYEAFDMIKQM 476
M R G L +A + +M
Sbjct: 354 MYARCGSLDDARRVFNRM 371
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/650 (33%), Positives = 371/650 (57%), Gaps = 27/650 (4%)
Query: 43 HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
H+ +++ + + + N + +L N I + N +I++ G+ + + L
Sbjct: 24 HVSSRVPVSFVSL---NPSANLMNDIKGNN------NQLIQSLCKGGNLKQAIHLLCCEP 74
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+ TF ++ +CA + + +G VH ++ +GF D ++ L++MY + G D
Sbjct: 75 ----NPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSID 130
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD--SVTIVSVASA 220
KVFDE R + W + A +E L L+ + G+ SD + T V A
Sbjct: 131 RARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACV 190
Query: 221 VGQLG--DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
V +L + K + +H + + + + ++ + +++ +YA+ G+V A VF M ++ +
Sbjct: 191 VSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFV 250
Query: 279 SWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
SW++M+ + +N +AL LF M + D PN VT + ++ AC L + + G+ HG
Sbjct: 251 SWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHG 310
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
YI+ + + NA++ MY +CG++ + +F+++ R+V SWN LI+ YGMHG G
Sbjct: 311 YILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNM--KNRDVVSWNSLISIYGMHGFG 368
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYAC 455
+KA++ F M+ +G P +I+F ++L ACSHAGL++EG+ F M +K + P ++HYAC
Sbjct: 369 KKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 428
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEH 510
MVD+LGRA L EA +I+ M P +VWG+LL +CRIH E A+ LF+LEP +
Sbjct: 429 MVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRN 488
Query: 511 TGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYW 570
G +VL+++IYA + W E + + ++ +GL+K S IE + + F + D NP
Sbjct: 489 AGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQI 548
Query: 571 KEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
+E++ + ++ E+K GY+P + L+D+++E++E ++ HSEKLAVAFG++N
Sbjct: 549 EEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGET 608
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLR+C DCH+ +FIS R+I+VRD NRFHHF+ G CSC DYW
Sbjct: 609 IRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/614 (36%), Positives = 360/614 (58%), Gaps = 18/614 (2%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N +I++ G+ + LEL S +T+ ++ +C + +L+ + VH ++
Sbjct: 43 NKLIQSLCKQGNLTQALELLSLEPNPA----QHTYELLILSCTHQNSLLDAQRVHRHLLE 98
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF D ++ L++MY+ D+ KVFD+ R + + + A A EE L +
Sbjct: 99 NGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNM 158
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQ----LGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+++ G+ SD T V A + + K + +H + + + + + I ++V
Sbjct: 159 YRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVD 218
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNP 312
MYA+ G V A VF+ M ++++SW++M+ Y +NG+A EAL LF E+ + D PN
Sbjct: 219 MYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNS 278
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT + ++ AC L + + GR HGYI+ + + +A++ MYA+CG L+ + +F+
Sbjct: 279 VTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQ 338
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ +R+V SWN LI+ YG+HG G+KA+ F +M GV+P I+F S+L ACSHAGL+D
Sbjct: 339 M--DKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVD 396
Query: 433 EGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG+ F M + P V+HYACMVD+LGRA L EA +I+ M + P VWG+LL +
Sbjct: 397 EGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGS 456
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIH E A+ LF LEP + G +VL+++IYA + W V ++++ ++ +GL+K
Sbjct: 457 CRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVP 516
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S IE + I F + D VNP ++++ + +++E+K GY+P L+D++ ++E
Sbjct: 517 GRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKE 576
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
++ HSEKLAVAFG++N + V+++TK+LR+C DCHS +FIS ++I+VRD NRF
Sbjct: 577 RIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRF 636
Query: 667 HHFEGGTCSCNDYW 680
HHF G CSC DYW
Sbjct: 637 HHFRDGVCSCGDYW 650
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 189/324 (58%), Gaps = 12/324 (3%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y+ L+ SC N L +++H L +G +Q L K+I Y+ + + AR +F+
Sbjct: 73 YELLILSCTHQNSLLDAQRVHRHLLENGF-DQDPFLATKLINMYSFFDSIDNARKVFDKT 131
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN----S 124
N Y ++N + RA + GH E L +Y M GI S+ +T+ +VLKAC ++ S
Sbjct: 132 RNRTIY--VYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVS 189
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
L+ +G+ +H I+R G+ ++ LVDMYAK G + VF++M V+++VSW+ MI
Sbjct: 190 LLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIA 249
Query: 185 AYEQAEKPEEALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
Y + K EAL LF++ + + L +SVT+VSV A L + + + +HGY +
Sbjct: 250 CYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGL 309
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
L + +++V MYARCG +E + VFD M+KRD++SWNS+++ Y +G +A+ +F+E
Sbjct: 310 DSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEE 369
Query: 303 MQNSDCKPNPVTALILVSACTYLG 326
M + +P+P++ + ++ AC++ G
Sbjct: 370 MTYNGVEPSPISFVSVLGACSHAG 393
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/610 (36%), Positives = 339/610 (55%), Gaps = 51/610 (8%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L CAS S E +H +R D V L YA G+ D +
Sbjct: 30 LLAGCASASRAAE---IHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPT 86
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKT--QQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
V +T I A+ AL L + + GLL + T+ + A G L +A+
Sbjct: 87 AVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACGCLA---VGRAL 143
Query: 234 HGYAICNAFLEDLCIQNSIVAMY--------------------------------ARCGN 261
HGYA+ A + + +++ MY A+ G
Sbjct: 144 HGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQ 203
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
++ AR +FD + ++DL+ WN+M+ GY Q+G+ SEAL LF +M S +P+ V+ ++ +SA
Sbjct: 204 LDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSA 263
Query: 322 CTYLGSRQLGRKFHGYIIN----SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS- 376
LG+ + GR H ++ N + ++++A + A++DMY KCG L+ A +F D+
Sbjct: 264 VAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGG 323
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+R+V +WN +I GY MHG R+ALE F Q+ +G+ P ITF +L+ACSH+GL+DEGR
Sbjct: 324 DRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRA 383
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
FA M + + P+V+HY CMVD+LGRAG + EAFD+++ M P+ ++W +LL ACR+H
Sbjct: 384 LFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLH 443
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
G+ A+YL ++G +VL+SN+YAA+ KWREVG++R M+ G++K S
Sbjct: 444 KNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSA 503
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
+E G+ + F DR +P E+Y K+E + + G++P LHD++D +E L
Sbjct: 504 VEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTELVLHDLDDAAKERALA 563
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSEKLA+AFG+++ P +++ KNLR C DCH+ + +S RKI+ RD NRFHHF
Sbjct: 564 VHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEATGRKIVFRDRNRFHHFV 623
Query: 671 GGTCSCNDYW 680
G+CSC DYW
Sbjct: 624 DGSCSCGDYW 633
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 187/422 (44%), Gaps = 51/422 (12%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL C + +IH++ + ++Q + ++ Y G + A +L + +
Sbjct: 30 LLAGCASASRAAEIHAAAVRAS-VDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPTA- 87
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTM--RRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+ + I A+++ G L L S M R G+ ++T L AC ++ G+ +
Sbjct: 88 -VFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACGCLAV---GRAL 143
Query: 133 HGDIIRTGFLSDSYVQAALVDM--------------------------------YAKCGQ 160
HG ++ + YV AL+ M YAK GQ
Sbjct: 144 HGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQ 203
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
DD +FD + +DLV W M+ Y Q +P EAL LF++ + G+ D V++V SA
Sbjct: 204 LDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSA 263
Query: 221 VGQLGDVLKAQAVHGYAICNAFLE-----DLCIQNSIVAMYARCGNVEKARLVFDMM--- 272
V QLG + +H + + N + + ++V MY +CG++E+A VF +
Sbjct: 264 VAQLGTAESGRWLHSF-VANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGG 322
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
RD+++WN+M+ GY +G++ EAL F +++ P +T + +++AC++ G GR
Sbjct: 323 GDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGR 382
Query: 333 KFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ + M D+ + G ++ A ++ + ++ + + W L+
Sbjct: 383 ALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMK-AKPDAAMWASLLGACR 441
Query: 392 MH 393
+H
Sbjct: 442 LH 443
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/555 (39%), Positives = 324/555 (58%), Gaps = 24/555 (4%)
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYA--KCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
K +H ++RTG D + + L+ A D +VFD++ +L +W +I AY
Sbjct: 52 KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111
Query: 188 QAEKPEEALILFQKT-QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ P ++L++F + Q D T + A +L ++ +A HG I D+
Sbjct: 112 SSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDV 171
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
I NS++ YA+CG + VF +RD++SWNSM+T ++Q G EAL LF EM+
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ 231
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ KPN +T + ++SAC + GR H YI + + TL NA++DMY KCG ++ A
Sbjct: 232 NVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDA 291
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYG------------MHGHGRKALEFFSQMLEEGVKPD 414
+ +F+ + E+++ SW ++ GY MHGHG+ A+ FS+M E+ VKP+
Sbjct: 292 KRLFDKM--PEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPN 349
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+TFT+IL ACSH GL++EGR F M + V P VKHYACMVD+LGRAG L EA ++I
Sbjct: 350 AVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELI 409
Query: 474 KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
++MP+ P SVWGALL AC IH E A + L +LEP + G +VL+SNIYA + KW
Sbjct: 410 EKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWD 469
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
V LR+ M++ GLKK S IE + F D +P K++Y K++ + ++ G
Sbjct: 470 RVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIG 529
Query: 589 YMPDLSCALHDVEDED-REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
Y+P+ S L VE+ED +E L HSEKLA+AFG+++ +++ KNLRVC DCHS
Sbjct: 530 YVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVA 589
Query: 648 RFISYIYRRKIIVRD 662
+ +S +Y R+I++RD
Sbjct: 590 KLVSKLYDREILLRD 604
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 225/445 (50%), Gaps = 22/445 (4%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT--ARSLFNSIHNDK 72
L+ C+ L+QIH+ + +GL +++I P+ A+ +F+ I +
Sbjct: 41 LIDQCSETKQLKQIHAQMLRTGLFFDPFS-ASRLITAAALSPFPSLDYAQQVFDQIPHPN 99
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKV 131
Y+ WNT+IRAYA++ + ++L ++ M +S + +TFPF++KA + + GK
Sbjct: 100 LYT--WNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKA 157
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
HG +I+ SD ++ +L+ YAKCG+ G +VF RD+VSW MITA+ Q
Sbjct: 158 FHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGC 217
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
PEEAL LFQ+ + + + + +T+V V SA + D + VH Y N E L + N+
Sbjct: 218 PEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNA 277
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ------------NGQASEALLL 299
++ MY +CG+VE A+ +FD M ++D++SW +ML GY + +G +A+ L
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIAL 337
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYA 358
F +MQ KPN VT ++ AC+++G + GR F + + A M D+
Sbjct: 338 FSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILG 397
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM--LEEGVKPDHI 416
+ G L+ A + + P S W L+ +H + A + SQ+ LE G ++
Sbjct: 398 RAGLLEEAVELIEKM-PMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYV 456
Query: 417 TFTSILSACSHAGLIDEGRKCFADM 441
++I + + RK D+
Sbjct: 457 LLSNIYAKAGKWDRVSGLRKLMRDV 481
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/682 (34%), Positives = 374/682 (54%), Gaps = 28/682 (4%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
++SC S+ IH +T +GL + A +L +++ +G ARS+F++I + +S
Sbjct: 51 IRSCKDSNSVSIIHQKITRAGLGSSA-YLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFS 109
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
WN +I AYA+ GH L L++ M + + TF L AC+S + G+ +H
Sbjct: 110 --WNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQRGREIHAR 164
Query: 136 IIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA-EKPE 193
I + G + A+ MYAKCG VFD + +++VSW +I AY Q+
Sbjct: 165 IKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHH 224
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF---LEDLCIQN 250
+AL LF+K + G+ T V V +G DV + +H + + D+ +QN
Sbjct: 225 QALDLFEKMAEHGVRPCRATFVGV---LGACNDVTSLEKIHARIVETGLQFDVRDVGVQN 281
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ MYA+CG++E AR +F M++RD +S N M+ + Q G E++ +F EM
Sbjct: 282 ALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQ 341
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD-----MYAKCGDLDT 365
+ T +++AC+ G+ + G++ H ++ + L N V++ MY KCG L+
Sbjct: 342 DDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQ 401
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A+ +F + + +N SWN ++A G G +A F EGV+ D +F S+L AC
Sbjct: 402 AKAVFKAM--TTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIAC 459
Query: 426 SHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
SH+G+++ F M + + P ++Y CMVD+L R+G L +A +++ MP P+
Sbjct: 460 SHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIA 519
Query: 485 WGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
W LL CR+ G + AA F LEP++T + L+S++Y+A+ K E+ +LR MK
Sbjct: 520 WRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKE 579
Query: 540 KGLKK-PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
+GL+K SVIE + F D +P ++ ++++ + VE+K AG++P +H
Sbjct: 580 RGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILNVELKQAGFVPSTDGVVH 639
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
D++ ED+E +L HSEKLAVAFG+++ + V KNLRVC+DCH A + IS + R I
Sbjct: 640 DLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVI 699
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
VRDANRFH F+ GTCSC DYW
Sbjct: 700 TVRDANRFHRFQSGTCSCGDYW 721
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 13/292 (4%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAK--IIIKYTTYGEPNTARSLFNSIHNDK 72
+L +CN + SL +IH+ + +GL +G + ++ Y G AR +F +
Sbjct: 248 VLGACNDVTSLEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRD 307
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
S N MI +A G E+++++ M G+ + TF V+ AC+ + GK +
Sbjct: 308 QVSM--NVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRI 365
Query: 133 HGDII-----RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
H ++ R L + V+ ALV MY KCG + VF M+ ++ VSW M+ A
Sbjct: 366 HKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACA 425
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ +EA + EG+ DS + +SV A G +L+ H + + F
Sbjct: 426 HQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSG-MLEVAYDHFQLMLSDFDLVPA 484
Query: 248 IQN--SIVAMYARCGNVEKA-RLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+N +V + AR G + A L+ M D I+W ++L G G A
Sbjct: 485 AENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENA 536
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/688 (33%), Positives = 376/688 (54%), Gaps = 45/688 (6%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFL--WN 79
L +R IH + +G+ +A + ++ Y G + A +F +++ + L +
Sbjct: 130 LEDVRAIHGRIVGAGIEREAF-VRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCS 188
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA------SNSLILEGKVVH 133
MI A NG E+L L+ M G + T VL AC+ + + +LE +
Sbjct: 189 AMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEV 248
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
R D+ + L+ YA+ FD + D+VSW M AY Q +P
Sbjct: 249 VSATR-----DNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPR 303
Query: 194 EALILFQKTQQEGLLSDSVTIVS-----------VASAVGQ-LGDVLKAQAVHGYAICNA 241
EAL+LF++ EG+ T ++ ASA+G+ + +L+ + G
Sbjct: 304 EALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEG------ 357
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMME--KRDLISWNSMLTGYIQNGQASEALLL 299
D + N+ + MYA+CG++ AR VF+ + +RD I+WNSML Y +G EA L
Sbjct: 358 ---DTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFEL 414
Query: 300 FDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
F M+ KPN VT + ++ A T S GR+ H ++++ + D ++NA+++MYA
Sbjct: 415 FQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYA 474
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG LD A+ +F+ ++ +V +W L+AGY +G +AL+ F M ++GV+P+HITF
Sbjct: 475 KCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITF 534
Query: 419 TSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
S L+AC+H G +++G + + MT + P KH++C+VD+LGR G L EA ++++
Sbjct: 535 ISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS 594
Query: 478 LPPNDSVWGALLLACR-----IHGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ W ALL AC+ GE A + QL+PE +++++++YAA+ +W E
Sbjct: 595 -QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAAT 653
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R+ M +KG++ S +E +++ F D+ +P +E+Y ++E + IK AGY+ D
Sbjct: 654 IRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVAD 713
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
LHDV E +E +L HSEKLA+AFG+M+ + ++V KNLRVC+DCH+A + IS
Sbjct: 714 TGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISK 773
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ R I++RD++R+HHF GTCSC DYW
Sbjct: 774 VTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/472 (31%), Positives = 240/472 (50%), Gaps = 19/472 (4%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI-HN 70
L+ +C+ L +L R+IHS ++ ++ LG +I Y+ G A+ F+ +
Sbjct: 13 LVNACSCLGNLAAGRRIHSQISDRDFEENSV-LGNALISMYSKCGSLIDAKQAFDRLPRA 71
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI-SSNSYTFPFVLKACASNSLI-LE 128
K WN MI A+ NG E L+L+ M G NS TF VL +C L+ LE
Sbjct: 72 SKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLE 131
Query: 129 G-KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF----DEMSVRDLVSWTVMI 183
+ +HG I+ G +++V+ ALVD Y K G DD +VF DE LV+ + MI
Sbjct: 132 DVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMI 191
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL--GDVLKAQAVHGYAICNA 241
+A Q P+E+L LF EG VT+VSV +A L G + +A
Sbjct: 192 SACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSA 251
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
D + +++ YAR ++ +AR FD ++ D++SWN+M Y+Q+ + EAL+LF+
Sbjct: 252 -TRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFE 310
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQ---LGRKFHGYIINSNMKIDATLRNAVMDMYA 358
M +P+ T + ++AC + +G++ + + ++ D + NA ++MYA
Sbjct: 311 RMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYA 370
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM-LEEGVKPDHIT 417
KCG L A +F I P+ R+ +WN ++A YG HG G++A E F M E+ VKP+ +T
Sbjct: 371 KCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVT 430
Query: 418 FTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
F ++L A + I +GR+ A + + + +++M + G L +A
Sbjct: 431 FVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDA 482
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 199/414 (48%), Gaps = 33/414 (7%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
+ N + ++ AC+ + G+ +H I F +S + AL+ MY+KCG D
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 166 KVFDEM---SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL-LSDSVTIVSVASAV 221
+ FD + S RD+V+W MI+A+ + EAL LF+ +G +SVT VSV +
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 222 GQLG--DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF----DMMEKR 275
+ G + +A+HG + + ++ ++V Y + G+++ A VF D
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL--GSRQLGRK 333
L++ ++M++ QNG E+L LF M KP+ VT + +++AC+ L GS
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSAT---- 238
Query: 334 FHGYIINSNMKI-----DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+++ M++ D L ++ YA+ DL A F+ I +V SWN + A
Sbjct: 239 --AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSP--DVVSWNAMAA 294
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH-----AGLIDEGRKCFADMTK 443
Y H R+AL F +ML EGV+P TF + L+AC+ A I G++ + + +
Sbjct: 295 AYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAI--GKRIQSLLEE 352
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
++ + ++M + G L +A + +++ D + W ++L A HG
Sbjct: 353 AGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHG 406
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 111/197 (56%), Gaps = 7/197 (3%)
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ +PN + LV+AC+ LG+ GR+ H I + + + ++ L NA++ MY+KCG L A
Sbjct: 2 EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61
Query: 367 ENMFNDI-HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV-KPDHITFTSILSA 424
+ F+ + S+R+V +WN +I+ + +G R+AL+ F M +G P+ +TF S+L +
Sbjct: 62 KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121
Query: 425 CSHAGL--IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM-IKQMPLPPN 481
C AGL +++ R + ++ E +VD G+ G L +A+++ +++ P+
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181
Query: 482 DSV--WGALLLACRIHG 496
S+ A++ AC +G
Sbjct: 182 TSLVTCSAMISACWQNG 198
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/610 (35%), Positives = 364/610 (59%), Gaps = 52/610 (8%)
Query: 76 FLWNTMIRAYANNGHCVETLELYST--MRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F +N +++A++ + T+ ++ + + + + YTF VLKACA + +LEG+ VH
Sbjct: 91 FAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVH 150
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
+ + G S+ +V+ +LVD+Y K G K+FDEM VRD+VSW +I+ Y + +
Sbjct: 151 CFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVD 210
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+A ++F ++ L+S S +++
Sbjct: 211 KARMVFDGMMEKNLVSWS---------------------------------------TMI 231
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CKPNP 312
+ YAR GN+E+AR +F+ M R+++SWN+M+ GY QN + ++A+ LF +MQ+ PN
Sbjct: 232 SGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPND 291
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT + ++SAC +LG+ LG+ H +I + +++ L NA+ DMYAKCG + A+ +F++
Sbjct: 292 VTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHE 351
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+H ER+V SW+++I G M+G+ +A FF++M+E+G++P+ I+F +L+AC+HAGL+D
Sbjct: 352 MH--ERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVD 409
Query: 433 EGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G + F M ++ + P+++HY C+VD+L RAG L +A +I MP+ PN VWGALL
Sbjct: 410 KGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGG 469
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK-NKGLKKP 545
CRI+ GE + +L+ H+G V ++N+YA+ + + R M+ NK +K P
Sbjct: 470 CRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTP 529
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F D +P +Y + + ++K+AGY P +H++++E++
Sbjct: 530 GC-SWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEK 588
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E L+ HSEKLA+AFG++N + +++ KNLRVCNDCH A + IS I R+I+VRD +R
Sbjct: 589 EDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSR 648
Query: 666 FHHFEGGTCS 675
FHHF+ G CS
Sbjct: 649 FHHFKDGKCS 658
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 117/258 (45%), Gaps = 13/258 (5%)
Query: 36 GLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETL 95
G++ + L + +I Y G AR LF ++ S WN MI YA N + +
Sbjct: 218 GMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVS--WNAMIAGYAQNEKYADAI 275
Query: 96 ELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
EL+ M+ G++ N T VL ACA + GK +H I R ++ AL DM
Sbjct: 276 ELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADM 335
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
YAKCG + VF EM RD++SW+++I EA F + ++GL + ++
Sbjct: 336 YAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISF 395
Query: 215 VSVASAVGQLGDVLKA-----QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR-LV 268
+ + +A G V K Y I C +V + +R G +++A L+
Sbjct: 396 MGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGC----VVDLLSRAGRLDQAESLI 451
Query: 269 FDMMEKRDLISWNSMLTG 286
M + ++I W ++L G
Sbjct: 452 NSMPMQPNVIVWGALLGG 469
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 260 GNVEKARLVFD-MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP--VTAL 316
GN+ + L+F+ + ++ ++N++L + Q+ + F+ PNP T
Sbjct: 72 GNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFT 131
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC L G+K H ++ + + +RN+++D+Y K G A+ +F+++
Sbjct: 132 SVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEM--V 189
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
R+V SWN LI+GY G KA F M+E+ + +++++++S + G ++E R+
Sbjct: 190 VRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNL----VSWSTMISGYARVGNLEEARQ 245
Query: 437 CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP----LPPNDSVWGALLLAC 492
F +M +V + M+ + +A ++ +QM L PND ++L AC
Sbjct: 246 LFENMPMRNVVS----WNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSAC 301
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 349/574 (60%), Gaps = 14/574 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA--KCGQTDDGCKVFDEMSV 173
+LK C++ + E K H I++ G DS+ + LV A G D C +F +M
Sbjct: 37 LLKKCSN---MEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDE 93
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+ M+ + + EEALI +++ + G+ D+ T ++ A +L V + V
Sbjct: 94 LGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQV 153
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H + + D+ +QNS+++MY +CG + VF+ M +R + SW++++T + G
Sbjct: 154 HAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMW 213
Query: 294 SEALLLFDEMQNSDCKPNPVTALI-LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
S+ L L +M N + L+ ++SACT+LG+ LGR HG+++ + ++ + +
Sbjct: 214 SDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETS 273
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
+++MY KCG L +F + +++N S++V+I+G MHG+GR+ L F++MLE+G++
Sbjct: 274 LIEMYLKCGSLYKGMCLFQKM--AKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLE 331
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PD I + +L+ACSHAGL+ EG +CF M + ++P ++HY CMVD++GRAG + EA +
Sbjct: 332 PDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALE 391
Query: 472 MIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNK 526
+IK MP+ PND +W +LL A ++H GEIAA LF+L+ + +V++SN+YA + +
Sbjct: 392 LIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQR 451
Query: 527 WREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM 586
W +V K R +M +KGL + FS++E + + F + D +P + VY+ + M ++K
Sbjct: 452 WEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKF 511
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSA 646
GY PD + L DV++E+++ L+ HS+KLA+A+ +++ + + +++ +NLR+CNDCH+
Sbjct: 512 EGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLRMCNDCHTY 571
Query: 647 FRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ IS I+ R+I VRD +RFHHF+ G CSC DYW
Sbjct: 572 TKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 605
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 197/382 (51%), Gaps = 6/382 (1%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI-IIKYTTYGEPNTARSLFNSIHNDKS 73
LLK C+ + +Q H+ + GL + + + +G + A S+F + D+
Sbjct: 37 LLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQM--DEL 94
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
SF +NTM+R + + + E L Y M G+ +++T+P +LKACA + EG VH
Sbjct: 95 GSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 154
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
I++ G +D +VQ +L+ MY KCG+ C VF++M+ R + SW+ +ITA+
Sbjct: 155 AHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWS 214
Query: 194 EALILFQKTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+ L L EG ++ +VSV SA LG + ++VHG+ + N ++ ++ S+
Sbjct: 215 DCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSL 274
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ MY +CG++ K +F M K++ +S++ M++G +G E L +F EM +P+
Sbjct: 275 IEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDD 334
Query: 313 VTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+ + +++AC++ G Q G + F+ + ++ ++D+ + G +D A +
Sbjct: 335 IVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIK 394
Query: 372 DIHPSERNVSSWNVLIAGYGMH 393
+ P E N W L++ +H
Sbjct: 395 SM-PMEPNDVLWRSLLSASKVH 415
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/707 (32%), Positives = 387/707 (54%), Gaps = 36/707 (5%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLI-----------NQALHLGA------- 46
G S+ G+Y++ L+ + L + + S T S ++ Q LH A
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 47 ------KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYST 100
++ Y + P AR +F+ + S S+ NTMI Y E++ ++
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY--NTMICGYLKLEMVEESVRMF-L 297
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
+ T VL+AC + K ++ +++ GF+ +S V+ L+D+YAKCG
Sbjct: 298 ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
VF+ M +D VSW +I+ Y Q+ EA+ LF+ +D +T + + S
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
+L D+ + +H I + DL + N+++ MYA+CG V + +F M D ++W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N++++ ++ G + L + +M+ S+ P+ T L+ + C L +++LG++ H ++
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ + + NA+++MY+KCG L+ + +F + S R+V +W +I YGM+G G KAL
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLENSSRVFERM--SRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDM 459
E F+ M + G+ PD + F +I+ ACSH+GL+DEG CF M T + P ++HYAC+VD+
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYF 514
L R+ + +A + I+ MP+ P+ S+W ++L ACR G++ + + +L P+ GY
Sbjct: 656 LSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
+L SN YAA KW +V +R+ +K+K + K +S IE GK++ F + D P + +Y
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIY 775
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDV-EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
K +E + + GY+PD ++ E+E++ ++ HSE+LA+AFG++N P +QV
Sbjct: 776 KSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQV 835
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH + IS I R+I+VRDANRFH F+ GTCSC D W
Sbjct: 836 MKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 275/492 (55%), Gaps = 10/492 (2%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
F + L S + L LR+IH+ + + GL + G K+I KY+ + EP ++ S+F +
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDSSDFFSG-KLIDKYSHFREPASSLSVFRRVSP 67
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
K+ +LWN++IRA++ NG E LE Y +R S +S + YTFP V+KACA G
Sbjct: 68 AKNV-YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+V+ I+ GF SD +V ALVDMY++ G +VFDEM VRDLVSW +I+ Y
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EEAL ++ + + ++ DS T+ SV A G L V + Q +HG+A+ + + + N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CK 309
+VAMY + AR VFD M+ RD +S+N+M+ GY++ E++ +F ++N D K
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFK 304
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P+ +T ++ AC +L L + + Y++ + +++T+RN ++D+YAKCGD+ TA ++
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
FN + ++ SWN +I+GY G +A++ F M+ + DHIT+ ++S +
Sbjct: 365 FNSMEC--KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGAL 488
+ G+ ++ K + ++ ++DM + G + ++ + M D+V W +
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM--GTGDTVTWNTV 480
Query: 489 LLACRIHGEIAA 500
+ AC G+ A
Sbjct: 481 ISACVRFGDFAT 492
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 198/413 (47%), Gaps = 12/413 (2%)
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS- 172
PF+ +A +S+S + E + +H +I G S + L+D Y+ + VF +S
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
+++ W +I A+ + EAL + K ++ + D T SV A L D
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
V+ + F DL + N++V MY+R G + +AR VFD M RDL+SWNS+++GY +G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
EAL ++ E++NS P+ T ++ A L + G+ HG+ + S + + N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++ MY K A +F+++ R+ S+N +I GY +++ F + L++ K
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDV--RDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FK 304
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
PD +T +S+L AC H + + + M K E ++D+ + G + A D+
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 473 IKQMPLPPNDSVWGALLLACRIHGEI-AANYLFQL------EPEHTGYFVLMS 518
M S W +++ G++ A LF++ + +H Y +L+S
Sbjct: 365 FNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/636 (35%), Positives = 355/636 (55%), Gaps = 14/636 (2%)
Query: 55 YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
YG F + + L MI Y E LEL+ M G+ +
Sbjct: 248 YGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACM 307
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA--ALVDMYAKCGQTDDGCKVFDEMS 172
VL AC+ + EG+++HG + F D +V A AL++MY KCG ++ +VF M
Sbjct: 308 AVLNACSGPRGLEEGRIIHGFMREIRF--DRHVNAGNALINMYGKCGSLEEAVEVFRSMQ 365
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
RD++SW +I A+ Q + EAL L Q +G+ +D ++ V+ + K +
Sbjct: 366 HRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRM 425
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI-QNG 291
+H + + + D+ + N+I+ MY C + + A VF M+ RD +SWN+M+T Y Q
Sbjct: 426 IHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPR 485
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+SEALLLF +MQ P+ ++ + +SAC S G+ H I + ++ + T+ N
Sbjct: 486 LSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVAN 545
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
AV++MYAK G L A MF + +V SWN +I+ + HGH + L FF +M EG
Sbjct: 546 AVLNMYAKSGTLVLARKMFGKMPLP--DVISWNGMISAFAQHGHADQVLRFFRRMNHEGK 603
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTK--LSVKPEVKHYACMVDMLGRAGCLYEA 469
P+ +TF S++SACSH GL+ +G + F + ++ P +HY CMVD++ RAG L A
Sbjct: 604 LPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAA 663
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAAS 524
I PL P+ + +L A ++H ++ +A +L +L P+ + +V++SN+Y
Sbjct: 664 EKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEV 723
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
K E K+R M K ++K AFS I + + F T D N E+ +++E +++E+
Sbjct: 724 GKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEM 783
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
AGY PD + LHDV DE ++ +L+YHSEKLA+AFG+++ P +++ KNLRVC DCH
Sbjct: 784 AKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCH 843
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A +FIS I R+I+VRD++RFHHF+ GTCSC DYW
Sbjct: 844 TATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 235/472 (49%), Gaps = 16/472 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+++H+ + S + ++ +G ++ Y G A++ F+ + + + W +IRA+
Sbjct: 18 KEVHARICKSAM-DRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALT--WARLIRAH 74
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN-SLILEGKVVHGDIIRTGFLSD 144
G + L L+ +M+ G++ + F VL AC+++ L+ EG+ +HG + T SD
Sbjct: 75 GQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESD 134
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
YV L+ MY KC +D KVFD + + +V W MITAY Q + E+A+ +F
Sbjct: 135 HYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLL 194
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC-----NAFLEDLCIQNSIVAMYARC 259
EG+ ++ +T + V A +L D+ A+ V +C + L D ++V Y C
Sbjct: 195 EGVKAERITFIGVLDACSKLKDLEVAKLV---KLCVEEREHDHLHDSSFATALVNFYGSC 251
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G++E+A F + +LI +M+T Y Q + EAL LF M K + + + ++
Sbjct: 252 GDLEQAFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVL 310
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+AC+ + GR HG++ NA+++MY KCG L+ A +F + R+
Sbjct: 311 NACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQ--HRD 368
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SWN +IA +G H +AL M +GVK D I+F + L C+ + + +GR +
Sbjct: 369 VISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHS 428
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ + +K +V ++DM G +A + + M + S W A++ A
Sbjct: 429 WIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVS-WNAMITA 479
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 176/358 (49%), Gaps = 7/358 (1%)
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
S SL L GK VH I ++ ++ LV MY CG D FD M V+D ++W
Sbjct: 11 SRSLDL-GKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWAR 69
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL-KAQAVHGYAICN 240
+I A+ Q E+AL LF+ Q EG+ + V+V A ++L + + +HG
Sbjct: 70 LIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGT 129
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
A D + +++ MY +C +VE AR VFD + + ++ WN+M+T Y Q +A+ +F
Sbjct: 130 AMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVF 189
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGR--KFHGYIINSNMKIDATLRNAVMDMYA 358
M K +T + ++ AC+ L ++ + K + D++ A+++ Y
Sbjct: 190 YAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYG 249
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
CGDL+ A F+ H E +++ +I Y +ALE F ML EGVK D I
Sbjct: 250 SCGDLEQAFRAFSR-HRLELILAT--AMITQYTQRERWDEALELFKVMLLEGVKLDRIAC 306
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
++L+ACS ++EGR M ++ V +++M G+ G L EA ++ + M
Sbjct: 307 MAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSM 364
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/648 (35%), Positives = 372/648 (57%), Gaps = 21/648 (3%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y + + AR +F+ I S+ NT+I AYA+ G C TL L+ +R +
Sbjct: 81 LINAYAKHSLIHIARRVFDEIPQPDIVSY--NTLIAAYADRGECGPTLRLFEEVRELRLG 138
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T V+ AC + ++ + +H ++ G + V A++ Y++ G + +V
Sbjct: 139 LDGFTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRV 196
Query: 168 FDEMSV---RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
F EM RD VSW MI A Q + EA+ LF++ + GL D T+ SV +A +
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCV 256
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSM 283
D++ + HG I + F + + + ++ +Y++C G++ + R VF+ + DL+ WN+M
Sbjct: 257 KDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTM 316
Query: 284 LTGY-IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
++G+ + + + L F EMQ + +P+ + + + SAC+ L S LG++ H I S+
Sbjct: 317 ISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSD 376
Query: 343 MKID-ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + ++ NA++ MY+KCG++ A +F+ + E N S N +IAGY HG ++L
Sbjct: 377 VPYNRVSVNNALVAMYSKCGNVHDARRVFDTM--PEHNTVSLNSMIAGYAQHGVEVESLR 434
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDML 460
F MLE+ + P+ ITF ++LSAC H G ++EG+K F M + ++PE +HY+CM+D+L
Sbjct: 435 LFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLL 494
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFV 515
GRAG L EA +I+ MP P W LL ACR HG + AAN +LEP + +V
Sbjct: 495 GRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYV 554
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
++SN+YA++ +W E ++ M+ +G+KK S IE K + F D +P KE++
Sbjct: 555 MLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHV 614
Query: 576 KVESMAVEIKMAGYMPDLSCAL---HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+ M ++K AGY+PD+ AL +VE ++RE L YHSEKLAVAFG+++ +
Sbjct: 615 YMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPIL 674
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLR+C DCH+A + IS + R+I VRD +RFH F+ G CSC DYW
Sbjct: 675 VVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 127/257 (49%), Gaps = 5/257 (1%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N+++ YA+ + AR VFD + + D++S+N+++ Y G+ L LF+E++
Sbjct: 79 NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ T +++AC L R+ H +++ A++ NAV+ Y++ G L A +
Sbjct: 139 LDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRV 196
Query: 370 FNDI-HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
F ++ R+ SWN +I G H G +A+ F +M+ G+K D T S+L+A +
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCV 256
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR-AGCLYEAFDMIKQMPLPPNDSVWGA 487
+ GR+ M K + ++D+ + AG + E + +++ P+ +W
Sbjct: 257 KDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEIT-APDLVLWNT 315
Query: 488 LLLACRIHGEIAANYLF 504
++ ++ +++ + L+
Sbjct: 316 MISGFSLYEDLSEDGLW 332
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/636 (35%), Positives = 355/636 (55%), Gaps = 14/636 (2%)
Query: 55 YGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
YG F + + L MI Y E LEL+ M G+ +
Sbjct: 248 YGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACM 307
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA--ALVDMYAKCGQTDDGCKVFDEMS 172
VL AC+ + EG+++HG + F D +V A AL++MY KCG ++ +VF M
Sbjct: 308 AVLNACSGPRGLEEGRMIHGFMREIRF--DRHVNAGNALINMYGKCGSLEEAVEVFRSMQ 365
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
RD++SW +I A+ Q + EAL L Q +G+ +D ++ V+ + K +
Sbjct: 366 HRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRM 425
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI-QNG 291
+H + + + D+ + N+I+ MY C + + A VF M+ RD +SWN+M+T Y Q
Sbjct: 426 IHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPR 485
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+SEALLLF +MQ P+ ++ + +SAC S G+ H I + ++ + T+ N
Sbjct: 486 LSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVAN 545
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
AV++MYAK G L A MF + +V SWN +I+ + HGH + L FF +M EG
Sbjct: 546 AVLNMYAKSGSLVLARKMFGKMPLP--DVISWNGMISAFAQHGHADQVLRFFRRMNHEGK 603
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTK--LSVKPEVKHYACMVDMLGRAGCLYEA 469
P+ +TF S++SACSH GL+ +G + F + ++ P +HY CMVD++ RAG L A
Sbjct: 604 LPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAA 663
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAAS 524
I PL P+ + +L A ++H ++ +A +L +L P+ + +V++SN+Y
Sbjct: 664 EKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEV 723
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
K E K+R M K ++K AFS I + + F T D N E+ +++E +++E+
Sbjct: 724 GKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEM 783
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
AGY PD + LHDV DE ++ +L+YHSEKLA+AFG+++ P +++ KNLRVC DCH
Sbjct: 784 AKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDCH 843
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+A +FIS I R+I+VRD++RFHHF+ GTCSC DYW
Sbjct: 844 TATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 235/473 (49%), Gaps = 18/473 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+++H+ + S + ++ +G ++ Y G A++ F+ + + + W +IRA+
Sbjct: 18 KEVHARICKSAM-DRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALT--WARLIRAH 74
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN-SLILEGKVVHGDIIRTGFLSD 144
G + L L+ +M+ G++ + F VL AC+++ L+ EG+ +HG + T SD
Sbjct: 75 GQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESD 134
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
YV L+ MY KC +D KVFD + + +V W MITAY Q + E+A+ +F
Sbjct: 135 HYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLL 194
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC-----NAFLEDLCIQNSIVAMYARC 259
EG+ ++ +T + V A +L D+ A+ V +C + L D ++V Y C
Sbjct: 195 EGVKAERITFIGVLDACSKLKDLEVAKLV---KLCVEEREHDHLHDSSFATALVNFYGSC 251
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G++E+A F + +LI +M+T Y Q + EAL LF M K + + + ++
Sbjct: 252 GDLEQAFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVL 310
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+AC+ + GR HG++ NA+++MY KCG L+ A +F + R+
Sbjct: 311 NACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQ--HRD 368
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SWN +IA +G H +AL M +GVK D I+F + L C+ + + +GR +
Sbjct: 369 VISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHS 428
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA 491
+ + +K +V ++DM G +A + + M D V W A++ A
Sbjct: 429 WIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAM--KARDQVSWNAMITA 479
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 176/358 (49%), Gaps = 7/358 (1%)
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
S SL L GK VH I ++ ++ LV MY CG D FD M V+D ++W
Sbjct: 11 SRSLDL-GKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWAR 69
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL-KAQAVHGYAICN 240
+I A+ Q E+AL LF+ Q EG+ + V+V A ++L + + +HG
Sbjct: 70 LIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGT 129
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
A D + +++ MY +C +VE AR VFD + + ++ WN+M+T Y Q +A+ +F
Sbjct: 130 AMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVF 189
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGR--KFHGYIINSNMKIDATLRNAVMDMYA 358
M K +T + ++ AC+ L ++ + K + D++ A+++ Y
Sbjct: 190 YAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYG 249
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
CGDL+ A F+ H E +++ +I Y +ALE F ML EGVK D I
Sbjct: 250 SCGDLEQAFRAFSR-HRLELILAT--AMITQYTQRERWDEALELFKVMLLEGVKLDRIAC 306
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
++L+ACS ++EGR M ++ V +++M G+ G L EA ++ + M
Sbjct: 307 MAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSM 364
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/669 (34%), Positives = 360/669 (53%), Gaps = 49/669 (7%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y+ P A +FN + S WNT+I ++ +G V+ L ++ M G S
Sbjct: 218 MIYGYSQMYGPYKALQIFNRMPERDEVS--WNTLISIFSQHGFGVQCLAMFVEMCNQGFS 275
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N T+ VL ACAS S + G +H I+R D L+DMYAKCG D +V
Sbjct: 276 PNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRV 335
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F + D +SW +IT E+ALILF + ++ ++ D + ++
Sbjct: 336 FKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYA 395
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV------------------- 268
+ +HGY I + + N+I+ MYA+CG+ +KA LV
Sbjct: 396 STGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAF 455
Query: 269 ------------FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
FDMM +R++++WNSML+ Y+QNG + E L L+ M+++ +P+ +T
Sbjct: 456 SRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFT 515
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
+ AC L +LG + + + ++ ++ N+++ MY++CG + A+N F+ I
Sbjct: 516 TSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSI--D 573
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
++++ SWN ++A + +G G K ++ F ML+ KP+HI++ S+LS CSH GL+ EG+
Sbjct: 574 DKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKH 633
Query: 437 CFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F MT++ + P +H++CMVD+LGRAG L +A D+I+ MP PN +VW ALL +CR+H
Sbjct: 634 YFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVH 693
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
E AA L +L+ E + +VL+SN+Y+ S + V +R+ MK KG++ S
Sbjct: 694 HDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSW 753
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
IE + F + +P KEVY K+E M I+ G + ++H +
Sbjct: 754 IEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVESSVHRSK--------K 805
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
YHSEKLA AFG++NL + V KNLRVC+DCH + +S + R++I+RD RFHHF+
Sbjct: 806 YHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHFK 865
Query: 671 GGTCSCNDY 679
G CSC DY
Sbjct: 866 DGICSCKDY 874
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 217/499 (43%), Gaps = 73/499 (14%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR----SGISSNSYTFPFV 116
A LF+ + S W TMI Y+ NG + E +S M R G + + ++F V
Sbjct: 93 AEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSV 152
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD-------------- 162
+KAC S +H + + GF ++ +Q ++V MY KCG D
Sbjct: 153 MKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSL 212
Query: 163 -----------------DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++F+ M RD VSW +I+ + Q + L +F + +
Sbjct: 213 FCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQ 272
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G + +T SV SA D+ +H + DL N ++ MYA+CG ++ A
Sbjct: 273 GFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLA 332
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+ VF + + D ISWNS++TG + G +AL+LF++M+ S + ++ C+
Sbjct: 333 KRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGP 392
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN-------------- 371
G HGY I S M A + NA++ MYAKCGD D A+ +F
Sbjct: 393 DYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMI 452
Query: 372 ----------------DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
D+ P ERN+ +WN +++ Y +G + L+ + M GV+PD
Sbjct: 453 TAFSRSGDIGKARGYFDMMP-ERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDW 511
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDM 472
ITFT+ + AC+ ++ G + TK + V +V M R G + EA FD
Sbjct: 512 ITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDS 571
Query: 473 IKQMPLPPNDSVWGALLLA 491
I L W A+L A
Sbjct: 572 IDDKDLIS----WNAMLAA 586
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 169/388 (43%), Gaps = 41/388 (10%)
Query: 160 QTDDGCKVFDEMSVR--DLVSWTVMITAYEQ----AEKPEEALILFQKTQQEGLLSDSVT 213
+ D K+FDEM VR D VSWT MI+ Y Q + E ++ + T G D +
Sbjct: 89 RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFS 148
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE---------- 263
SV A G LGD A +H F + CIQNS+V MY +CG+V+
Sbjct: 149 FTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIE 208
Query: 264 ---------------------KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
KA +F+ M +RD +SWN++++ + Q+G + L +F E
Sbjct: 209 RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVE 268
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M N PN +T ++SAC + G H I+ +D N ++DMYAKCG
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGC 328
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
LD A+ +F + E + SWN LI G G G AL F+QM V D +IL
Sbjct: 329 LDLAKRVFKSLR--EHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
CS G K + ++ M + G +A + + MPL N
Sbjct: 387 GVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPL-RNT 445
Query: 483 SVWGALLLACRIHGEIA-ANYLFQLEPE 509
W A++ A G+I A F + PE
Sbjct: 446 ISWTAMITAFSRSGDIGKARGYFDMMPE 473
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 129/302 (42%), Gaps = 69/302 (22%)
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM----------- 303
MY+ CG A VF R++ +WN+M+ + + + S+A LFDEM
Sbjct: 52 MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWT 111
Query: 304 -------QN-----------------SDCKPN--PVTALILVSACTYLGSRQLGRKFHGY 337
QN +D N P + ++ AC LG +L + H
Sbjct: 112 TMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHAL 171
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI-HPS-------------------- 376
+ ++ ++N+V+ MY KCGD+D AE +F DI PS
Sbjct: 172 VSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKA 231
Query: 377 --------ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
ER+ SWN LI+ + HG G + L F +M +G P+ +T+ S+LSAC+
Sbjct: 232 LQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAST 291
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGA 487
+ G A + ++ ++ ++DM + GCL A + K L +D + W +
Sbjct: 292 SDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKS--LREHDHISWNS 349
Query: 488 LL 489
L+
Sbjct: 350 LI 351
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 89/223 (39%), Gaps = 45/223 (20%)
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG------------------------- 361
S + RK H +I S + L N ++ MY+ CG
Sbjct: 23 SPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIR 82
Query: 362 ------DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE----GV 411
+ AE +F+++ ++ SW +I+GY +G ++ E FS M+ + G
Sbjct: 83 ALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGK 142
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA-- 469
D +FTS++ AC G + A ++KL E +V M + G + A
Sbjct: 143 NYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAET 202
Query: 470 --FDMIKQMPLPPNDSVWGALLLA-CRIHGEIAANYLFQLEPE 509
FD+ + P+ W +++ +++G A +F PE
Sbjct: 203 VFFDIER-----PSLFCWNSMIYGYSQMYGPYKALQIFNRMPE 240
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/605 (34%), Positives = 351/605 (58%), Gaps = 20/605 (3%)
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
N H + + +L + + + ++K C S + E K VH I++ G DS+
Sbjct: 10 NHHLLPSKDLPQSSSELNLKQKEQEYLCLVKKCKS---LEEFKQVHVQILKFGLFLDSFC 66
Query: 148 QAALVDMYAKCGQTD-----DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
++++ A C +D C +F ++ + MI Y E A+ L+
Sbjct: 67 SSSVL---ATCALSDWNSMDYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLYNDM 123
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
Q + D+ T V A +L + + +HG+ +D+ +QNS++ MY +C ++
Sbjct: 124 LQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDI 183
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI-LVSA 321
E + +F ME++ + SW++++ + E L LF++M C + L+ ++SA
Sbjct: 184 EMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSA 243
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
CT+LG+ LGR HG ++ + +++ + ++MDMY KCG L +F ++ + +N
Sbjct: 244 CTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNM--TRKNQL 301
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
S++V+I+G G+HG+GR+AL+ FS+M+EEG++PD +T+ S+LSACSH+GL+DEG F M
Sbjct: 302 SYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKM 361
Query: 442 T-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
+ ++P ++HY CMVD+ GRAG L EAF +++ MP+ ND +W +LL AC++H
Sbjct: 362 KFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLKL 421
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
GEIAA LF+L + ++++SN+YA + +W K+R M N+GL + +S++E
Sbjct: 422 GEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKS 481
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F + D+ +YK + M +++ GYMPD S + DV++E++ L HS+K
Sbjct: 482 KVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKGHSQK 541
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AF +++ + + +++ +NLR+CNDCHS + +S IY R+I VRD NRFHHF+ G CS
Sbjct: 542 LAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMIYEREITVRDRNRFHHFKDGNCS 601
Query: 676 CNDYW 680
C DYW
Sbjct: 602 CRDYW 606
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 199/389 (51%), Gaps = 8/389 (2%)
Query: 9 EGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI-IIKYTTYGEPNTARSLFNS 67
E Y L+K C L +Q+H + GL + + + + + + A S+F
Sbjct: 32 EQEYLCLVKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQ 91
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ D+ +F +NTMIR Y NN + + LY+ M + + +++T+P VLKACA ++I
Sbjct: 92 L--DEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVLKACARLAVIQ 149
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
EG +HG + + G D YVQ +L++MY KC + C +F M + + SW+ +I A+
Sbjct: 150 EGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVASWSAIIAAHA 209
Query: 188 QAEKPEEALILFQKTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
E L LF+ +EG ++ +V+V SA LG + HG + N ++
Sbjct: 210 SLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGSLLKNITELNV 269
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ S++ MY +CG+++K +F M +++ +S++ +++G +G +AL +F EM
Sbjct: 270 AVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGRQALQIFSEMVEE 329
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLD 364
+P+ VT + ++SAC++ G G + +I+ T+++ ++D+ + G L+
Sbjct: 330 GLEPDDVTYVSVLSACSHSGLVDEGLDLFDK-MKFEYRIEPTMQHYGCMVDLKGRAGLLE 388
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMH 393
A + + P + N W L++ +H
Sbjct: 389 EAFQLVQSM-PIKANDVLWRSLLSACKVH 416
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/562 (37%), Positives = 325/562 (57%), Gaps = 11/562 (1%)
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
EG+ +H + GF + Q LV MYAKCG D+ +F+ + R +VSW+ MI AY
Sbjct: 3 EGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYA 62
Query: 188 QAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-- 244
+ +EAL+LF + + +G + +++T V +A G + D+ + + +H A+ + L+
Sbjct: 63 LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ ++N+++ MY RCG++E+AR VFD M+ D SW SM+T +N + EAL LF M
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMN 182
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
P VT +++AC G+ ++G++ H + S + A++DMYAKCG L+
Sbjct: 183 LEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLE 242
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
+ +F + RN SW +IA HG G +ALE F +M EG+ D TF +L A
Sbjct: 243 CSSKVFTAMET--RNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRA 300
Query: 425 CSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CSHAGLI E + F M + ++ P HY +D +GRAG L +A ++I MP P
Sbjct: 301 CSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETL 360
Query: 484 VWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
W LL ACRIH + A L +L PE + + L+ N+YAA+ ++ + ++R+ M
Sbjct: 361 TWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMT 420
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
++GLKK S IE + F DR +P E+ ++E + ++ AGY+P+ LH
Sbjct: 421 DRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLH 480
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
V +E++E ++ HSEKLA+AFG++ P + + KNLRVC+DCH+A + I+ I RR+I
Sbjct: 481 AVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRI 540
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
+VRD +RFHHFE G CSC DYW
Sbjct: 541 VVRDTHRFHHFEDGQCSCKDYW 562
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 198/398 (49%), Gaps = 9/398 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IHS L+ G ++A ++ Y G + AR++FN I S W+ MI AY
Sbjct: 5 RRIHSRLSLCGF-HRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVS--WSAMIGAY 61
Query: 86 ANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL-- 142
A +G E L L+ MR G + N+ TF V AC + +G+ +H + +G L
Sbjct: 62 ALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKS 121
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
S++ ++ AL++MY +CG ++ KVFD M D SWT MITA + + EAL LF +
Sbjct: 122 SNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRM 181
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
EG+ SVT+ SV +A G + + +H + F + Q +++ MYA+CG++
Sbjct: 182 NLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSL 241
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
E + VF ME R+ +SW +M+ Q+GQ EAL LF EM + T + ++ AC
Sbjct: 242 ECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRAC 301
Query: 323 TYLG-SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
++ G ++ FH + + + T +D + G L AE + + + P
Sbjct: 302 SHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSM-PFHPETL 360
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
+W L+ +H +A + +++L + D + +T
Sbjct: 361 TWKTLLNACRIHSQAERATK-VAELLSKLAPEDSMAYT 397
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 144/305 (47%), Gaps = 19/305 (6%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASL---RQIHSSLTTSG-LINQALHLGAKIIIKYTTYGEP 58
R+ P+ F + +C + L R+IH+ SG L + L ++ Y G
Sbjct: 82 RVEPNAMTFTG-VFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSL 140
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
AR +F+++ D +F W +MI A N +E LEL+ M GI S T VL
Sbjct: 141 EEARKVFDTM--DHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLN 198
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
ACA + + GK +H + +GF S Q AL+DMYAKCG + KVF M R+ VS
Sbjct: 199 ACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVS 258
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
WT MI A Q + +EAL LF++ EG+++D+ T + V A G + ++
Sbjct: 259 WTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKES-----LEF 313
Query: 239 CNAFLEDLCIQNS------IVAMYARCGNVEKA-RLVFDMMEKRDLISWNSMLTGYIQNG 291
++ +ED I + + R G ++ A L+ M + ++W ++L +
Sbjct: 314 FHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHS 373
Query: 292 QASEA 296
QA A
Sbjct: 374 QAERA 378
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 336/576 (58%), Gaps = 16/576 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF---DEMS 172
+L+AC + + + +H II+ GF ++ V + + ++
Sbjct: 13 ILQACNTLPKLAQ---LHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDAR 69
Query: 173 VRDLVSWTVMITAY-EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
V D ++ +I AY E ++ A+ + G+ + V A L D+ +
Sbjct: 70 VYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGK 129
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
AVHG + F +D+ +QN++V MY C G +E AR +FD M K D ++W +M+ GY +
Sbjct: 130 AVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARL 189
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
GQ++ A+ LF +MQ + P+ VT + ++SACT LG+ +LG+ YI + L
Sbjct: 190 GQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELS 249
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
NA++DM+AKCGD+D A +F ++ S+R + SW +I G MHG G +A+ F +M G
Sbjct: 250 NALVDMFAKCGDVDKALGLFRNM--SKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASG 307
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEA 469
+ P+ I F +LSACSH+GL++ GR+ F++MT+ + P+++HY CMVD+L RAG + EA
Sbjct: 308 MVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEA 367
Query: 470 FDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAAS 524
+ +++MP+ PN +W L+ ACR+HGE+ + L + EP H +VL+SNIY
Sbjct: 368 LEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKM 427
Query: 525 NKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI 584
W + K+R M KG++K ++IE +I F DR + + E+ K V M E+
Sbjct: 428 LDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREM 487
Query: 585 KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
K AGY P + D+++ED+E L+ HSEKLA+AF ++N P + +++TKNLRVC DCH
Sbjct: 488 KRAGYAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCH 547
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
SA +FIS IY R+I++RD +RFHHF G CSC D+W
Sbjct: 548 SASKFISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 214/413 (51%), Gaps = 8/413 (1%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
+L++CN L L Q+H+ + G N L L K + A SL S+ + + Y
Sbjct: 13 ILQACNTLPKLAQLHTHIIKLGFQNNPLVL-TKFTSASSNLDAIPYAMSLVFSVEDARVY 71
Query: 75 -SFLWNTMIRAYANNGHCVE-TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+FL++T+IRAYA + + Y+ M GIS N Y FPFVLKACA + GK V
Sbjct: 72 DAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAV 131
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKC-GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
HG +++ GF D +VQ +V MY C G + K+FDEM D V+WT MI Y + +
Sbjct: 132 HGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQ 191
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
A+ LF+K Q G+ D VT+VSV SA LG + + + Y L+ + + N+
Sbjct: 192 SAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNA 251
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V M+A+CG+V+KA +F M KR ++SW S++ G +G+ EA+ LF+EM+ S P
Sbjct: 252 LVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPE 311
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMF 370
+ + L+SAC++ G + GR++ + + M D+ ++ G L T F
Sbjct: 312 DIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAG-LVTEALEF 370
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ P E N W LI+ +HG + Q++ +P H + +LS
Sbjct: 371 VERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRN--EPMHESNYVLLS 421
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/520 (37%), Positives = 314/520 (60%), Gaps = 16/520 (3%)
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
VF + ++ +W M Y +++ P AL +++ + D+ T + A+ + +
Sbjct: 86 VFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLN 145
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
V + +A+H I N F + +QNS++ +YA CG+ E A VF++M RDL++ S++ G
Sbjct: 146 VREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVING 205
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
+ NG+ SEAL LF EM +P+ T + L+SA LG+ +LGR+ H Y++ ++ +
Sbjct: 206 FALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLREN 265
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ + N+++D+YAKC + I ERN SW LI G ++G G +ALE F +M
Sbjct: 266 SHVTNSLLDLYAKC----------DAIWEXERNAVSWTSLIVGLAVNGFGEEALELFREM 315
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGC 465
+G+ P ITF +L ACSH G++DEG F M + + P ++HY CMVD+L RAG
Sbjct: 316 EGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGL 375
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNI 520
+ +A++ I+ MP+ PN W LL AC IHG E A ++L +LEP+H+G +VL+SN+
Sbjct: 376 VKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNL 435
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
Y + +W +V +R M G+KK + +S++E G + F +R +P ++VY +E +
Sbjct: 436 YTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYALLEKI 495
Query: 581 AVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVC 640
+K+ GY+P + L D+E+E++E L+YHSEK A+AF +N P ++V KNLRVC
Sbjct: 496 TELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKNLRVC 555
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH A + ++ +Y R+I++RD RFHHF GG+CSC DYW
Sbjct: 556 ADCHMAIKLMAKVYDREIVIRDRGRFHHFRGGSCSCKDYW 595
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 189/385 (49%), Gaps = 26/385 (6%)
Query: 25 LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT------------ARSLFNSIHNDK 72
LR IH+ G++ +G +I + P + A ++F IHN
Sbjct: 35 LRXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMSYAYNVFTWVLSYAYNVFTMIHNPN 94
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
F WNTM R YA + + L Y M S I +++T+PF+LKA + + + EG+ +
Sbjct: 95 V--FTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAI 152
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H IR GF S +VQ +L+ +YA CG T+ VF+ M RDLV+ +I + +P
Sbjct: 153 HSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRP 212
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EAL LF++ EG+ D T+VS+ SA +LG + + VH Y + E+ + NS+
Sbjct: 213 SEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSL 272
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ +YA+C + + +R+ +SW S++ G NG EAL LF EM+ P+
Sbjct: 273 LDLYAKCDAIWEX--------ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSE 324
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMF 370
+T + ++ AC++ G G + + I + + ++D+ ++ G + A
Sbjct: 325 ITFVGVLYACSHCGMLDEGFDYFRR-MKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYI 383
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGH 395
++ P + N +W L+ +HGH
Sbjct: 384 QNM-PVQPNAVTWRTLLGACTIHGH 407
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/605 (36%), Positives = 334/605 (55%), Gaps = 42/605 (6%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC--GQTDDGCKVFDEMSV 173
+L+ +S + + +H I TG SD++V + ++ A G +F +
Sbjct: 38 ILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRK 97
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
D+ +I AY + P +A++ + + T+ + D T + A ++ + +A
Sbjct: 98 PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD---------------------- 270
+H + + ++ + N +V MYA CG +E A LVFD
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGV 217
Query: 271 ---------MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
M RD++SW+ M+ GY+Q + E L LF +M +PN + +SA
Sbjct: 218 FKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSA 277
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C +LG+ + G+ Y+ N+++ L A++DMY+KCG ++ A +F+ + E+NV
Sbjct: 278 CAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKM--KEKNVL 335
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
+W+ +I G ++G G+ AL FSQM +GVKP+ +TF IL+ACSH+ L+DEG F M
Sbjct: 336 AWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSM 395
Query: 442 TKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG---- 496
T + +KP H+ CMVD+ GRAG L +A +IK MP PN ++WGALL ACRIHG
Sbjct: 396 TSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTEL 455
Query: 497 -EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
E L +L+P H G +VL+SNIYAA +W V +LR M+ + + K S I+ G
Sbjct: 456 GEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGD 515
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
I F D +P + +Y K+ M+ E+K AGY PD L D+++E++E L +HSEK
Sbjct: 516 TIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEK 575
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AFG++ P +++TKNLRVC DCHSA + IS IY R+IIVRD RFHHF G+CS
Sbjct: 576 LAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCS 635
Query: 676 CNDYW 680
C D+W
Sbjct: 636 CMDFW 640
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 223/460 (48%), Gaps = 45/460 (9%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKII--IKYTTYGEPNTARSLFNSIHNDKS 73
L SC L L QIH+ T+G+ + + ++I+ + +G AR LF I K
Sbjct: 42 LSSCKTLKDLTQIHAQTITTGIFSDNF-VASRILSFAALSPHGSIPYARFLFYRIR--KP 98
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLILEGKVV 132
F+ NT+IRAYA + + ++ + YS M S + + +TFP +LKAC+ + G+ +
Sbjct: 99 DIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAI 158
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE---------------------- 170
H + + G+ S+ V LV MYA CG + VFD
Sbjct: 159 HSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVF 218
Query: 171 ---------MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
M RD+VSW+VMI Y Q + +E L LFQ E + + +V+ SA
Sbjct: 219 KSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSAC 278
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
LG + + Q + Y + + +++ MY++CG+VE+A VF M+++++++W+
Sbjct: 279 AHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWS 338
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIIN 340
+M+ G NGQ +AL LF +M+ KPN VT + +++AC++ G FH
Sbjct: 339 AMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSI 398
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+K +A ++D+Y + G LD A+ + + P + N + W L+ +HG
Sbjct: 399 YGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSM-PFKPNSAIWGALLNACRIHGDTELGE 457
Query: 401 EFFSQMLEEGVKPDH----ITFTSILSACSHAGLIDEGRK 436
+ ++LE + P+H + ++I +AC + E R+
Sbjct: 458 QVGKRLLE--LDPNHGGRYVLLSNIYAACGRWDRVAELRR 495
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 13/288 (4%)
Query: 3 RLGPSTE----GFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP 58
+LG S+E F Q+ SC + S + + + +G Y G
Sbjct: 164 KLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGG-----YLKCGVF 218
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
+AR +F ++ + S W+ MI Y E L L+ M I N L
Sbjct: 219 KSARRMFEAMPDRDVVS--WSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALS 276
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
ACA + +G+ + + R + AL+DMY+KCG + +VF +M +++++
Sbjct: 277 ACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLA 336
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA-VHGYA 237
W+ MI + ++AL LF + + +G+ + VT + + +A V + + H
Sbjct: 337 WSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMT 396
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRDLISWNSML 284
+ +V +Y R G +++A+ V M K + W ++L
Sbjct: 397 SIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALL 444
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/639 (34%), Positives = 350/639 (54%), Gaps = 44/639 (6%)
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
T I + G+ E + + R I +N+ F +++C + + GK +H ++ +
Sbjct: 18 TAIATLCSKGNLREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVS 73
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGC-------------------------------KVF 168
GF SD ++ L+ MY+K G KVF
Sbjct: 74 GFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVF 133
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
DEM R L +W MI Q E EE L LF++ G D T+ SV S L V
Sbjct: 134 DEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVS 193
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
Q +HGY I DL + +S+ MY R G ++ +V M R+L++WN+++ G
Sbjct: 194 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNA 253
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
QNG L L+ M+ S C+PN +T + ++S+C+ L R G++ H I
Sbjct: 254 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 313
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ ++++ MY+KCG L A F++ + + W+ +I+ YG HG G +A+E F+ M E
Sbjct: 314 VVSSLISMYSKCGCLGDAAKAFSEREDEDEVM--WSSMISAYGFHGQGDEAIELFNTMAE 371
Query: 409 E-GVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCL 466
+ ++ + + F ++L ACSH+GL D+G + F M K KP +KHY C+VD+LGRAGCL
Sbjct: 372 QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 431
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH--GEIAANY---LFQLEPEHTGYFVLMSNIY 521
+A +I+ MP+ + +W LL AC IH E+A + Q++P + +VL++N++
Sbjct: 432 DQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVH 491
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A++ +WR+V ++R+ M++K +KK A S E+ ++ F DR KE+Y ++ +
Sbjct: 492 ASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELT 551
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
+E+K+ GY PD + LHD+++E++E L HSEKLAVAF +M L A +++ KNLRVC+
Sbjct: 552 LEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCS 611
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH AF++IS I R+I +RD +RFHHF G CSC DYW
Sbjct: 612 DCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 186/397 (46%), Gaps = 10/397 (2%)
Query: 19 CNFLAS----LRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKS 73
CN L S L S++ G + + ++ + I+I Y G+ AR +F+ + + K
Sbjct: 82 CNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKL 141
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ WN MI E L L+ M G S + YT V A + G+ +H
Sbjct: 142 TT--WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH 199
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G I+ G D V ++L MY + G+ DG V M VR+LV+W +I Q PE
Sbjct: 200 GYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPE 259
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
L L++ + G + +T V+V S+ L + Q +H AI + + +S++
Sbjct: 260 TVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLI 319
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNP 312
+MY++CG + A F E D + W+SM++ Y +GQ EA+ LF+ M + ++ + N
Sbjct: 320 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 379
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V L L+ AC++ G + G + ++ K V+D+ + G LD AE +
Sbjct: 380 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 439
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ P + ++ W L++ +H + A F ++L+
Sbjct: 440 SM-PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 475
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/510 (38%), Positives = 320/510 (62%), Gaps = 10/510 (1%)
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYA 237
W +I Y + A+ L+++ + G + D+ T + AVG++ DV + +H
Sbjct: 88 WNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVV 147
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
I + F + +QNS++ +YA CG+V A VFD M ++DL++WNS++ G+ +NG+ EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
L+ EM KP+ T + L+SAC +G+ LG++FH Y+I + + N ++D+Y
Sbjct: 208 ALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM-LEEGVKPDHI 416
A+CG ++ A+ +F+++ ++N SW LI G ++G G++A+E F M +EG+ P I
Sbjct: 268 ARCGRVEEAKTLFDEM--VDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEI 325
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
TF IL ACSH G++ EG + F M++ ++P ++H+ CMVD+L RAG + +A++ I +
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILK 385
Query: 476 MPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ PN +W LL AC +HG E+A + QLEP H+G +VL+SN+YA+ +W +V
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDV 445
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
K+R+ M G++K S++E G + F D+ +P +Y K++ M +++ GY+
Sbjct: 446 QKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYV 505
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P +S DVE+E++E+ L YHSEK+A+AF +++ ++V KNL+VC DCH A + +
Sbjct: 506 PQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLV 565
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S +Y R+I+VRD +RFHHF+ G+CSC DYW
Sbjct: 566 SKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 205/380 (53%), Gaps = 10/380 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP---NTARSLFNSIHNDKSYSFLW 78
L LRQIH+ +G+ LG +I + P + A +F+ I + F+W
Sbjct: 30 LTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV-FIW 88
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
NT+IR YA G+ V + LY MR SG + +++T+PF+LKA + + G+ +H +I
Sbjct: 89 NTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVI 148
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R+GF S YVQ +L+ +YA CG KVFD+M +DLV+W +I + + KPEEAL
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
L+ + +G+ D TIVS+ SA ++G + + H Y I +L N ++ +YA
Sbjct: 209 LYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CKPNPVTAL 316
RCG VE+A+ +FD M ++ +SW S++ G NG EA+ LF M++ + P +T +
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFV 328
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIH 374
++ AC++ G + G ++ ++ KI+ + + ++D+ A+ G + A +
Sbjct: 329 GILYACSHCGMVKEGFEYFRR-MSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKM- 386
Query: 375 PSERNVSSWNVLIAGYGMHG 394
P + NV W L+ +HG
Sbjct: 387 PMQPNVVIWRTLLGACTVHG 406
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/605 (35%), Positives = 341/605 (56%), Gaps = 20/605 (3%)
Query: 91 CVETLELYSTMRRSGISSNSYTF----PF-VLKACASNSLILEGKVVHGDIIRTGFLSDS 145
C+ T + T S S N + P +L C S + E K + I+T SD
Sbjct: 5 CIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTS---LNELKQIQAYTIKTNLQSDI 61
Query: 146 YVQAALVD---MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
V L++ + D +FD++ +D++ + +M Y ++ P A LF +
Sbjct: 62 SVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGEL 121
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
GLL D T S+ A + + +H +A+ ++ I +++ MYA C ++
Sbjct: 122 LCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDM 181
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
AR VFD ME+ ++S+N+++TGY ++ Q +EAL LF E+Q S+ +P VT L ++ +C
Sbjct: 182 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSC 241
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
LG+ LG+ H Y+ + A++DM+AKCG L A ++F + R+ +
Sbjct: 242 ALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRV--RDTQA 299
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W+ +I + HG G KA+ F +M EGV+PD ITF +L ACSHAGL+++GR F M+
Sbjct: 300 WSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS 359
Query: 443 KL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--- 498
K + P +KHY CMVD+LGRAG L EA++ + ++ + +W LL AC HG +
Sbjct: 360 KTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMA 419
Query: 499 --AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
+F+L+ H G +V++SN+YA +W +V LR+ MK++G+ K S +E
Sbjct: 420 KRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNV 479
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH-DVEDEDREHMLNYHSEK 615
+ F + D V+ E+ + ++ + EIK+ GY+PD S H D+E+E +E +L YHSEK
Sbjct: 480 VHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEK 539
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AFG++N P ++V KNLR+C DCH+A + IS+I+ RKI++RD RFH FE G CS
Sbjct: 540 LAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCS 599
Query: 676 CNDYW 680
C D+W
Sbjct: 600 CGDFW 604
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 196/402 (48%), Gaps = 16/402 (3%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN---- 70
LL C L L+QI + I L ++ K + N S + H+
Sbjct: 35 LLSKCTSLNELKQIQAYT-----IKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQ 89
Query: 71 --DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
DK L+N M R YA + L+ + SG+ + YTF +LKACAS+ + E
Sbjct: 90 ILDKDI-ILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALRE 148
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G +H ++ G + Y+ L++MYA+C + VFDEM +VS+ +IT Y +
Sbjct: 149 GMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYAR 208
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ +P EAL LF++ Q + VT++SV + LG + + +H Y F + + +
Sbjct: 209 SSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKV 268
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+++ M+A+CG++ A +F+ M RD +W++M+ + +G +A+ +F+EM+
Sbjct: 269 NTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGV 328
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTA 366
+P+ +T L L+ AC++ G + GR + Y ++ I +++ ++D+ + G LD A
Sbjct: 329 RPDEITFLGLLYACSHAGLVEQGRGYF-YSMSKTYGITPGIKHYGCMVDLLGRAGHLDEA 387
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
N + + + W L++ HG+ A ++ E
Sbjct: 388 YNFVDKLEIKATPI-LWRTLLSACSTHGNVEMAKRVIERIFE 428
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/690 (33%), Positives = 386/690 (55%), Gaps = 33/690 (4%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
L+ +C L +L R++H L +G + L ++ Y G + A+ +F + +
Sbjct: 36 LVAACTKLQALEEGRRLHEHLIITGFRTD-IPLETALLQMYAKCGSLDDAKRVFEGM--E 92
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
F W+++I AYA G + LY M G+ N TF L CAS + + +G+
Sbjct: 93 IKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRA 152
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ + D +Q +L++MY KC + + KVF+ M R++ S+T MI+AY QA +
Sbjct: 153 IHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGE 212
Query: 192 PEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EAL LF + ++ E + ++ T ++ AV LG++ K + VH + F ++ +QN
Sbjct: 213 HAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQN 272
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MY +CG+ +AR VFD M R++ISW SM+ Y Q+G EAL LF M D +P
Sbjct: 273 ALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEP 329
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ V+ ++AC LG+ GR+ H ++ +N+ + +++ MYA+CG LD A +F
Sbjct: 330 SGVSFSSALNACALLGALDEGREIHHRVVEANLA-SPQMETSLLSMYARCGSLDDARRVF 388
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
N + R+ S N +IA + HG ++AL + +M +EG+ D ITF S+L ACSH L
Sbjct: 389 NRM--KTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSL 446
Query: 431 IDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ + R + V P V+HY CMVD+LGR+G L +A ++++ MP + W LL
Sbjct: 447 VADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLL 506
Query: 490 LACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
C+ HG++ AA +F+L P T +V +SN+YAA+ ++ + ++R++M+ +G+ +
Sbjct: 507 SGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTR 566
Query: 545 PAAFSVIEYGKDIQGFHTADR---VNPYWKEVYKKVESMAVEI----KMAGYMPDLSCAL 597
P A S IE ++ F + R + ++V S+ VE+ K AGY+PD
Sbjct: 567 PVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQAGYVPDTREVY 626
Query: 598 HDVE----DEDREHMLNYHSEKLAVAFGIM---NLTPEAVVQVTKNLRVCNDCHSAFRFI 650
+ + +E+++ L +HSE+LA+A+G++ + ++V + RVC+ CHSA + +
Sbjct: 627 LEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSGCHSAIKLL 686
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S I ++I VRD +RFHHFE G CSC D+W
Sbjct: 687 SDITEKRIFVRDGSRFHHFEKGACSCGDHW 716
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 224/398 (56%), Gaps = 9/398 (2%)
Query: 81 MIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
MI A G ++ LEL+ M GI ++ + ++ AC + EG+ +H +I TG
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F +D ++ AL+ MYAKCG DD +VF+ M ++DL +W+ +I AY +A + E A++L++
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ EG+ + VT + + +A+H + + +D +Q+S++ MY +C
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC-KPNPVTALILV 319
+ +AR VF+ M+ R++ S+ +M++ Y+Q G+ +EAL LF M + +PN T ++
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
A LG+ + GRK H ++ + + ++NA++ MY KCG A +F+ + + RN
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSM--TARN 298
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SW +IA Y HG+ ++AL F +M V+P ++F+S L+AC+ G +DEGR+
Sbjct: 299 VISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHH 355
Query: 440 DMTKLSV-KPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ + ++ P+++ ++ M R G L +A + +M
Sbjct: 356 RVVEANLASPQME--TSLLSMYARCGSLDDARRVFNRM 391
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+IA G +ALE + +M E G+ D TS+++AC+ ++EGR+ +
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ ++ ++ M + G L +A + + M + + W +++ A
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEI-KDLFAWSSIIAA 105
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/577 (37%), Positives = 332/577 (57%), Gaps = 17/577 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF----DEM 171
+L+AC + + + +H I++ G ++ V + + TD +
Sbjct: 35 LLQACNALPKLTQ---IHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADT 91
Query: 172 SVRDLVSWTVMITAYEQ-AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+ D + +I AY Q ++AL L+ + +L + T V A L +
Sbjct: 92 RLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLG 151
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
Q VHG + F D+ +QN++V MY+ C G + AR VFD M K D ++W++M+ GY +
Sbjct: 152 QTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYAR 211
Query: 290 NGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL 349
G+++EA+ LF EMQ ++ P+ +T + ++SACT LG+ +LG+ YI + +
Sbjct: 212 VGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEV 271
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
NA++DM+AKCGD+ A +F + +E+ + SW +I G MHG G++A F +M
Sbjct: 272 SNALIDMFAKCGDISKALKLFRAM--NEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSS 329
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYE 468
GV PD + F +LSACSH+GL++ GR+ F M K + P+++HY CMVDM R G + E
Sbjct: 330 GVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKE 389
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAA 523
A + ++ MP+ PN + L+ ACR HGE L + EP H +VL+SNIYA
Sbjct: 390 ALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAK 449
Query: 524 SNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE 583
+ W + K+RE M+ KG+KK ++IE +I F D+ + KE+Y+ V+ M E
Sbjct: 450 TLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGRE 509
Query: 584 IKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
+K +GY P S L D+ +ED+E LN HSEKLA+AFG++ P +++ KNLRVC+DC
Sbjct: 510 MKKSGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDC 569
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
HSA +FIS IY R+II+RD NRFHHF+ G CSC D+W
Sbjct: 570 HSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 224/442 (50%), Gaps = 44/442 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL++CN L L QIH+ + GL N L L I + A LF++ + + Y
Sbjct: 35 LLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLY 94
Query: 75 -SFLWNTMIRAYANNGHCVE-TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
+FL+NT+IRAYA GH + L LY M I N +T+PFVLKACA ++ G+ V
Sbjct: 95 DAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTV 154
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKC-GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
HG +++ GF D +VQ +V MY+ C G + KVFDEM D V+W+ MI Y + +
Sbjct: 155 HGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGR 214
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EA+ LF++ Q + D +T+VS+ SA LG + + + Y + + + + N+
Sbjct: 215 STEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNA 274
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ M+A+CG++ KA +F M ++ ++SW S++ G +G+ EA LF+EM +S P+
Sbjct: 275 LIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPD 334
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMF 370
V + L+SAC++ G + GR++ G ++ + M DMY + G +
Sbjct: 335 DVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLV------- 387
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
++ALEF M ++P+ + +++SAC G
Sbjct: 388 --------------------------KEALEFVRNM---PIEPNPVILRTLVSACRGHGE 418
Query: 431 IDEGRKCFADMTKLSVKPEVKH 452
G K +TKL +K E H
Sbjct: 419 FKLGEK----ITKLLMKHEPLH 436
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 142/332 (42%), Gaps = 50/332 (15%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTT-YGEPNTARSLFNS 67
Y +LK+C L L + +H S+ G + +H+ ++ Y+ G N+AR +F+
Sbjct: 135 YPFVLKACAGLEVLNLGQTVHGSVVKFGF-DCDIHVQNTMVHMYSCCAGGINSARKVFDE 193
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ KS S W+ MI YA G E + L+ M+ + + + T +L AC +
Sbjct: 194 M--PKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALE 251
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
GK + I R V AL+DM+AKCG K+F M+ + +VSWT +I
Sbjct: 252 LGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMA 311
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ +EA LF++ G+ D V + + SA
Sbjct: 312 MHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSAC-------------------------- 345
Query: 248 IQNSIVAMYARCGNVEKARLVF-DMMEKRDLIS----WNSMLTGYIQNGQASEALLLFDE 302
+ G VE+ R F MM+K L+ + M+ Y + G EAL +
Sbjct: 346 ---------SHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEAL---EF 393
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
++N +PNPV LVSAC G +LG K
Sbjct: 394 VRNMPIEPNPVILRTLVSACRGHGEFKLGEKI 425
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/669 (34%), Positives = 365/669 (54%), Gaps = 31/669 (4%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IHS + T + ++ Y G + A +F + WN M+ AY
Sbjct: 457 RKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAY 516
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A N E M + G+ ++ +F VL +C + E +V+ I+ +G+ S +
Sbjct: 517 AQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ---EAQVLRMCILESGYRS-A 572
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL+ M+ +C + + VF+EM D+VSWT M++A + +E LF++ Q E
Sbjct: 573 CLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLE 632
Query: 206 GLLSDSVTIVS-----VASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARC 259
G++ D T+ + +AS LG V+ A + LE D+ ++N+++ MY+ C
Sbjct: 633 GVIPDKFTLATTLDTCLASTTLGLGKVIHA------CVTEIGLEADIAVENALLNMYSNC 686
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT--ALI 317
G+ +A F+ M+ RDL+SWN M Y Q G A EA+LLF +MQ KP+ +T +
Sbjct: 687 GDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTL 746
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
VS + L S G+ FH S + D ++ ++ +YAKCG LD A ++F +
Sbjct: 747 NVSGGSALVSD--GKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRG--ACD 802
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
V N +I HG +A++ F +M +EGV+PD T SI+SAC HAG+++EG
Sbjct: 803 WTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSS 862
Query: 438 FADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
F M + + P ++HYAC VD+LGRAG L A +I++MP N VW +LL C++ G
Sbjct: 863 FLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG 922
Query: 497 -----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
E A + +L+P ++ V++SNIY A+ KW++ R+ M ++ +K S
Sbjct: 923 DAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWF 982
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E GK + F DR +P E+Y ++ + + ++ AGY D DVEDE +E L Y
Sbjct: 983 EIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKGL---DVEDELKEKALGY 1039
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSE++A+AFG++ PE +++ KNLRVC DCH+A ++IS + R+IIVRD+ RFHHF
Sbjct: 1040 HSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSN 1099
Query: 672 GTCSCNDYW 680
GTCSC D W
Sbjct: 1100 GTCSCKDCW 1108
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 241/495 (48%), Gaps = 22/495 (4%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL+SC N LA + H + +GL Q L LG +I Y G A ++F+ +
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGL-EQHLFLGNCLINMYVRCGSLEEAHAIFSKM 86
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLIL 127
S W +I A A G L+ TM S + NSYT +L ACA++ +
Sbjct: 87 EERNVVS--WTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLA 144
Query: 128 EGKVVHGDIIRTGF----LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
G+ +H I G + + V A+++MYAKCG +D VF + +D+VSWT M
Sbjct: 145 IGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMA 204
Query: 184 TAYEQAEK-PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
AY Q + +AL +F++ + L + +T ++ A L D +H +
Sbjct: 205 GAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEASL 261
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR---DLISWNSMLTGYIQNGQASEALLL 299
D N+++ MY +CG+ E A VF M R DL+SWN+M++ ++ G+ +A+ +
Sbjct: 262 GFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLG-SRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
F ++ +PN VT + +++A G R FHG I S D + NA++ MYA
Sbjct: 322 FRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYA 381
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG A +F I + +V SWN ++ K + F ML G+ P+ ++F
Sbjct: 382 KCGFFSAAWAVFRRIR-WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSF 440
Query: 419 TSILSACSHAGLIDEGRKCFA-DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+IL+ACS++ +D GRK + +T+ E +V M G+ G + EA + K+MP
Sbjct: 441 IAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMP 500
Query: 478 LPPNDSV-WGALLLA 491
LP V W +L A
Sbjct: 501 LPSRSLVTWNVMLGA 515
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/665 (35%), Positives = 368/665 (55%), Gaps = 46/665 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGI 106
I+ Y P A+++F+ + + S WN ++ Y NNG E E++ M R+ +
Sbjct: 135 IVAGYFQNKRPQEAQNMFDKMSERNTIS--WNGLVSGYINNGMINEAREVFDRMPERNVV 192
Query: 107 SSNSYTFPFVLKACASNSLIL-----EGKVVHGDIIRTGFLSDSYVQAA--LVDM----- 154
S + +V + S + L E VV ++ G L + + A L DM
Sbjct: 193 SWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKD 252
Query: 155 ----------YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
Y + G+ + +FDEM R++VSWT MIT Y Q ++ + A LF+ +
Sbjct: 253 VVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE 312
Query: 205 EGLLSDSVTIVSVASA--VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+ +S + + + + + ++ A + CNA + LC + + G V
Sbjct: 313 KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMI--LC--------FGQNGEV 362
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
KAR VFD M ++D +W++M+ Y + G +AL LF MQ +PN + + ++S C
Sbjct: 363 PKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVC 422
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
L + GR+ H ++ S +D + + ++ MY KCG+L A+ +F+ + ++V
Sbjct: 423 AGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRF--AVKDVVM 480
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM- 441
WN +I GY HG G +AL F M G+ PD +TF +LSACS+ G + +G + F M
Sbjct: 481 WNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
TK V+ +++HYACMVD+LGRAG L EA D+I++MP+ + +WGALL ACR H
Sbjct: 541 TKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
E+AA L LEP++ G F+L+SNIYA+ +W +V +LR +M+++ + K S I K
Sbjct: 601 EVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKK 660
Query: 557 IQGFHTADRV-NPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D +P E+ + +E ++ ++ AGY PD S LHDV++E++ L YHSEK
Sbjct: 661 VHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEK 720
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVA+G++ + ++V KNLRVC DCH+A + I+ + R+II+RDANRFHHF+ G+CS
Sbjct: 721 LAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCS 780
Query: 676 CNDYW 680
C DYW
Sbjct: 781 CRDYW 785
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 182/404 (45%), Gaps = 71/404 (17%)
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ----- 204
+L+ Y++ GQ + VFDEM ++++SW ++ Y Q ++P+EA +F K +
Sbjct: 103 SLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTIS 162
Query: 205 -----------------------------------------EGLLSDSVTIV------SV 217
EG++S++ T+ +V
Sbjct: 163 WNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNV 222
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAF----LEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
S LG +L+ + C F +D+ + +++ Y + G + +AR++FD M
Sbjct: 223 VSWTVMLGGLLQEGRID--EACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMP 280
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
+R+++SW +M+TGY+QN Q A LF+ M + N V+ ++ T GR
Sbjct: 281 RRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYT-----NCGRL 331
Query: 334 FHGYIINSNMKIDATLR-NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ + M I + + NA++ + + G++ A +F+ + E++ +W+ +I Y
Sbjct: 332 DEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMR--EKDEGTWSAMIKVYER 389
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
G ALE F M EG++P+ + S+LS C+ +D GR+ A + + +V
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+ ++ M + G L +A + + + + +W +++ HG
Sbjct: 450 ASVLLSMYIKCGNLAKAKQVFDRFAV-KDVVMWNSIITGYAQHG 492
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 144/334 (43%), Gaps = 46/334 (13%)
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+NS++ Y+R G +EKAR+VFD M +++ISWNS++ GY QN + EA +FD+M
Sbjct: 101 RNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER-- 158
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
N ++ LVS G R+ + N+ A++ Y K G + AE
Sbjct: 159 --NTISWNGLVSGYINNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEGMISEAET 212
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F + E+NV SW V++ G G +A F M E+ D +T T+++
Sbjct: 213 LFWQM--PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEK----DVVTRTNMIGGYCQV 266
Query: 429 GLIDEGRKCFADMTK-------------------------LSVKPEVKHYACMVDMLGRA 463
G + E R F +M + V PE + + G
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYT 326
Query: 464 GC--LYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AANYLFQLEPEHTGYFVLMSN 519
C L EA ++ MP+ + A++L +GE+ A Q+ + G + M
Sbjct: 327 NCGRLDEASELFNAMPIKSVVAC-NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIK 385
Query: 520 IYAASNKWREVGKLREDMKNKGLKK--PAAFSVI 551
+Y + +L M+ +G++ P+ SV+
Sbjct: 386 VYERKGLELDALELFRMMQREGIRPNFPSLISVL 419
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 28/238 (11%)
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
+IS NS++T Y + GQ +A ++FDEM++ + I+ G Q R
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKN---------IISWNSIVAGYFQNKRPQEA 148
Query: 337 YIINSNMKIDATLR-NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ M T+ N ++ Y G ++ A +F+ + ERNV SW ++ GY G
Sbjct: 149 QNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRM--PERNVVSWTAMVRGYVKEGM 206
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
+A F QM E+ V +++T +L G IDE + F M PE K
Sbjct: 207 ISEAETLFWQMPEKNV----VSWTVMLGGLLQEGRIDEACRLFDMM------PE-KDVVT 255
Query: 456 MVDMLG---RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-AANYLFQLEPE 509
+M+G + G L EA + +MP N W ++ + ++ A LF++ PE
Sbjct: 256 RTNMIGGYCQVGRLVEARMLFDEMP-RRNVVSWTTMITGYVQNQQVDIARKLFEVMPE 312
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/665 (35%), Positives = 368/665 (55%), Gaps = 46/665 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGI 106
I+ Y P A+++F+ + + S WN ++ Y NNG E E++ M R+ +
Sbjct: 135 IVAGYFQNKRPQEAQNMFDKMSERNTIS--WNGLVSGYINNGMINEAREVFDRMPERNVV 192
Query: 107 SSNSYTFPFVLKACASNSLIL-----EGKVVHGDIIRTGFLSDSYVQAA--LVDM----- 154
S + +V + S + L E VV ++ G L + + A L DM
Sbjct: 193 SWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKD 252
Query: 155 ----------YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
Y + G+ + +FDEM R++VSWT MIT Y Q ++ + A LF+ +
Sbjct: 253 VVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPE 312
Query: 205 EGLLSDSVTIVSVASA--VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+ +S + + + + + ++ A + CNA + LC + + G V
Sbjct: 313 KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMI--LC--------FGQNGEV 362
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
KAR VFD M ++D +W++M+ Y + G +AL LF MQ +PN + + ++S C
Sbjct: 363 PKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVC 422
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
L + GR+ H ++ S +D + + ++ MY KCG+L A+ +F+ + ++V
Sbjct: 423 AGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRF--AVKDVVM 480
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM- 441
WN +I GY HG G +AL F M G+ PD +TF +LSACS+ G + +G + F M
Sbjct: 481 WNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSME 540
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
TK V+ +++HYACMVD+LGRAG L EA D+I++MP+ + +WGALL ACR H
Sbjct: 541 TKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
E+AA L LEP++ G F+L+SNIYA+ +W +V +LR +M+++ + K S I K
Sbjct: 601 EVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKK 660
Query: 557 IQGFHTADRV-NPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D +P E+ + +E ++ ++ AGY PD S LHDV++E++ L YHSEK
Sbjct: 661 VHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEK 720
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVA+G++ + ++V KNLRVC DCH+A + I+ + R+II+RDANRFHHF+ G+CS
Sbjct: 721 LAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCS 780
Query: 676 CNDYW 680
C DYW
Sbjct: 781 CRDYW 785
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 182/404 (45%), Gaps = 71/404 (17%)
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ----- 204
+L+ Y++ GQ + VFDEM ++++SW ++ Y Q ++P+EA +F K +
Sbjct: 103 SLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTIS 162
Query: 205 -----------------------------------------EGLLSDSVTIV------SV 217
EG++S++ T+ +V
Sbjct: 163 WNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNV 222
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAF----LEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
S LG +L+ + C F +D+ + +++ Y + G + +AR++FD M
Sbjct: 223 VSWTVMLGGLLQEGRID--EACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMP 280
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
+R+++SW +M+TGY+QN Q A LF+ M + N V+ ++ T GR
Sbjct: 281 RRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNEVSWTAMLKGYT-----NCGRL 331
Query: 334 FHGYIINSNMKIDATLR-NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ + M I + + NA++ + + G++ A +F+ + E++ +W+ +I Y
Sbjct: 332 DEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMR--EKDEGTWSAMIKVYER 389
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
G ALE F M EG++P+ + S+LS C+ +D GR+ A + + +V
Sbjct: 390 KGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYV 449
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+ ++ M + G L +A + + + + +W +++ HG
Sbjct: 450 ASVLLSMYIKCGNLAKAKQVFDRFAV-KDVVMWNSIITGYAQHG 492
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 144/334 (43%), Gaps = 46/334 (13%)
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+NS++ Y+R G +EKAR+VFD M +++ISWNS++ GY QN + EA +FD+M
Sbjct: 101 RNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER-- 158
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
N ++ LVS G R+ + N+ A++ Y K G + AE
Sbjct: 159 --NTISWNGLVSGYINNGMINEAREVFDRMPERNV----VSWTAMVRGYVKEGMISEAET 212
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F + E+NV SW V++ G G +A F M E+ D +T T+++
Sbjct: 213 LFWQM--PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEK----DVVTRTNMIGGYCQV 266
Query: 429 GLIDEGRKCFADMTK-------------------------LSVKPEVKHYACMVDMLGRA 463
G + E R F +M + V PE + + G
Sbjct: 267 GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYT 326
Query: 464 GC--LYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AANYLFQLEPEHTGYFVLMSN 519
C L EA ++ MP+ + A++L +GE+ A Q+ + G + M
Sbjct: 327 NCGRLDEASELFNAMPIKSVVAC-NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIK 385
Query: 520 IYAASNKWREVGKLREDMKNKGLKK--PAAFSVI 551
+Y + +L M+ +G++ P+ SV+
Sbjct: 386 VYERKGLELDALELFRMMQREGIRPNFPSLISVL 419
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 28/238 (11%)
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
+IS NS++T Y + GQ +A ++FDEM++ + I+ G Q R
Sbjct: 98 IISRNSLITRYSRLGQIEKARVVFDEMRDKN---------IISWNSIVAGYFQNKRPQEA 148
Query: 337 YIINSNMKIDATLR-NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ M T+ N ++ Y G ++ A +F+ + ERNV SW ++ GY G
Sbjct: 149 QNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRM--PERNVVSWTAMVRGYVKEGM 206
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
+A F QM E+ V +++T +L G IDE + F M PE K
Sbjct: 207 ISEAETLFWQMPEKNV----VSWTVMLGGLLQEGRIDEACRLFDMM------PE-KDVVT 255
Query: 456 MVDMLG---RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-AANYLFQLEPE 509
+M+G + G L EA + +MP N W ++ + ++ A LF++ PE
Sbjct: 256 RTNMIGGYCQVGRLVEARMLFDEMP-RRNVVSWTTMITGYVQNQQVDIARKLFEVMPE 312
>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/676 (35%), Positives = 367/676 (54%), Gaps = 74/676 (10%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKS 73
L+ C+ L+QIH+ + +GL I + + + A+ +F+ I +
Sbjct: 41 LIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNL 100
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVV 132
Y+ WNT+IRAYA++ + ++L ++ M +S + +TFPF++KA + + GK
Sbjct: 101 YT--WNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
HG +I+ SD ++ +L+ YAKCG+ G +VF + RD+VSW MITA+ Q P
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCP 218
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNS 251
EEAL LFQ+ + + L+ S ++ + + G + D + + + E D+ +
Sbjct: 219 EEALELFQEMETQNSLTLSNAMLDMYTKCGSVEDAKR--------LFDKMPEKDIVSWTT 270
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CKP 310
++ YA+ G + A+ +FD M +D+ +WN++++ Y Q G+ EAL LF E+Q S KP
Sbjct: 271 MLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKP 330
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ VT + MK++ L +++DMY KCGDL A +F
Sbjct: 331 DEVT------------------------LKQGMKLNCHLTTSLIDMYCKCGDLQKALMVF 366
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ + ++V W+ +IAG MHGHG+ A+ FS+M E+ VKP+ +TFT+IL ACSH GL
Sbjct: 367 HSV--ERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGL 424
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
++EGR F M + K MP+ P SVWGALL
Sbjct: 425 VEEGRTFFNQMELVYGK----------------------------MPMAPAASVWGALLG 456
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC IH E A + L +LEP + G +VL+SNIYA + KW V LR+ M++ GLKK
Sbjct: 457 ACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKE 516
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED- 604
S IE + F D +P K++Y K++ + ++ GY+P+ S L VE+ED
Sbjct: 517 PGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDV 576
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L HSEKLA+AFG+++ +++ KNLRVC DCHS + +S +Y R+I++RD
Sbjct: 577 KEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRY 636
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 637 RFHHFREGHCSCMDYW 652
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/562 (35%), Positives = 342/562 (60%), Gaps = 11/562 (1%)
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYA--KCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
E K H I++ G DS+ + LV A G D C +F +M + M+
Sbjct: 3 EFKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRG 62
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+ + EEALI +++ + G+ D+ T ++ A +L V + VH + + D
Sbjct: 63 HVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLEND 122
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ +QNS+++MY +CG + VF+ M +R + SW++++T + G S+ L L +M N
Sbjct: 123 VFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSN 182
Query: 306 SDCKPNPVTALI-LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ L+ ++SACT+LG+ LGR HG+++ + ++ + ++++MY KCG L
Sbjct: 183 EGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLY 242
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
+F + +++N S++V+I+G MHG+GR+ L F++MLE+G++PD I + +L+A
Sbjct: 243 KGMCLFQKM--AKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNA 300
Query: 425 CSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CSHAGL+ EG +CF M + ++P ++HY CMVD++GRAG + EA ++IK MP+ PND
Sbjct: 301 CSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDV 360
Query: 484 VWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
+W +LL A ++H GEIAA LF+L+ + +V++SN+YA + +W +V + R +M
Sbjct: 361 LWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMF 420
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
+KGL + FS++E + + F + D +P + VY+ + M ++K GY PD + L
Sbjct: 421 SKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLC 480
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
DV++E+++ L+ HS+KLA+A+ +++ + + V++ +NLR+CNDCH+ + IS I+ R+I
Sbjct: 481 DVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREI 540
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
VRD +RFHHF+ G CSC DYW
Sbjct: 541 TVRDRHRFHHFKDGACSCRDYW 562
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 191/375 (50%), Gaps = 6/375 (1%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKI-IIKYTTYGEPNTARSLFNSIHNDKSYSFLWNT 80
+ +Q H+ + GL + + + +G + A S+F + D+ SF +NT
Sbjct: 1 MEEFKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQM--DEPGSFZFNT 58
Query: 81 MIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
M+R + + + E L Y M G+ +++T+P +LKACA + EG VH I++ G
Sbjct: 59 MMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLG 118
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
+D +VQ +L+ MY KCG+ C VF++M+ R + SW+ +ITA+ + L L
Sbjct: 119 LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLG 178
Query: 201 KTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
EG ++ +VSV SA LG + ++VHG+ + N ++ ++ S++ MY +C
Sbjct: 179 DMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKC 238
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G + K +F M K++ +S++ M++G +G E L +F EM +P+ + + ++
Sbjct: 239 GXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVL 298
Query: 320 SACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+AC++ G Q G + F+ + ++ ++D+ + G +D A + + P E
Sbjct: 299 NACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSM-PMEP 357
Query: 379 NVSSWNVLIAGYGMH 393
N W L++ +H
Sbjct: 358 NDVLWRSLLSASKVH 372
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/676 (34%), Positives = 372/676 (55%), Gaps = 53/676 (7%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGE--PNTARSLFNSIHNDK 72
LL SC L +L QIH G+ + G I+ + + P R L D
Sbjct: 3 LLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD- 61
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKV 131
+F++NT++R Y+ + ++ ++ M R G + +S++F FV+KA + + G
Sbjct: 62 --AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 119
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++ G S +V L+ MY CG + KVFDEM +LV+W +ITA +
Sbjct: 120 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 179
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
A +F K + + N
Sbjct: 180 VAGAREIFDKM---------------------------------------LVRNHTSWNV 200
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++A Y + G +E A+ +F M RD +SW++M+ G NG +E+ L F E+Q + PN
Sbjct: 201 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 260
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V+ ++SAC+ GS + G+ HG++ + ++ NA++DMY++CG++ A +F
Sbjct: 261 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 320
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +R + SW +IAG MHG G +A+ F++M GV PD I+F S+L ACSHAGLI
Sbjct: 321 GMQ-EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLI 379
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F++M ++ ++PE++HY CMVD+ GR+G L +A+D I QMP+PP VW LL
Sbjct: 380 EEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLG 439
Query: 491 ACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC HG I L +L+P ++G VL+SN YA + KW++V +R+ M + +KK
Sbjct: 440 ACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKT 499
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDVEDED 604
A+S++E GK + F ++ E ++K++ + + +K AGY P+++ AL+DVE+E+
Sbjct: 500 TAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEE 559
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E ++ HSEKLA+AF + L+ A +++ KNLR+C DCH+ + S +Y +I+VRD N
Sbjct: 560 KEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRN 619
Query: 665 RFHHFEGGTCSCNDYW 680
RFH F+ G+CSC DYW
Sbjct: 620 RFHSFKDGSCSCRDYW 635
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/570 (36%), Positives = 329/570 (57%), Gaps = 8/570 (1%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L+ CA +L GK HG I G ++D+ L+++Y KCG+ D VFD M VR +
Sbjct: 64 LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSW MI Y + + +AL LF + +EG T+ S A + + + +H
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
A+ A + + +I+ +YA+C ++ A VF+ M +R L++W+S+ GY+QNG EA
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L LF Q + T ++SAC L + G + H I+ + + +++D+
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YA+CG ++ A +F + +NV WN +IA + H H +A+ F +M + G+ P+ +
Sbjct: 304 YARCGQIEKAYALF--AYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEV 361
Query: 417 TFTSILSACSHAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
T+ S+LS CSHAGL+++GR F+ M+ +V+P V HY+CMVD+LGR+G EA++++ +
Sbjct: 362 TYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNK 421
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP P S+WG+LL +CR + IAA LFQLEP++ G VL+SN+YAAS W V
Sbjct: 422 MPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENV 481
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
R+ +K+ G KK S IE + F +R +P ++Y K+E + E++
Sbjct: 482 LMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARR 541
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
+ C LHDV E +E +L +HSEKLA++FG+++L + + KNLR+C DCHS +
Sbjct: 542 TSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIA 601
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++I R +IVRD NRFHHF+ G+CSC D+W
Sbjct: 602 AHITERLVIVRDTNRFHHFKDGSCSCGDFW 631
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 216/429 (50%), Gaps = 20/429 (4%)
Query: 17 KSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
KSC+ LA IH L T L L I YT G + AR +F+ +H S
Sbjct: 77 KSCHGLA----IHFGLVTDTLTCNIL------INLYTKCGRNDCARLVFDIMHVRSIVS- 125
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WNTMI Y ++G V+ L+L+S M R G + +T + ACA+ I E K +H
Sbjct: 126 -WNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIA 184
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++ S+S+V A++D+YAKC D C VF++M R LV+W+ + Y Q EEAL
Sbjct: 185 LKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEAL 244
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF+ Q+EG+ T+ ++ SA L ++ +H + F + + S+V +Y
Sbjct: 245 HLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVY 304
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
ARCG +EKA +F ME ++++ WN+M+ + ++ + EA++LF++MQ PN VT L
Sbjct: 305 ARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYL 364
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHP 375
++S C++ G + GR + +++ L + M D+ + G D A + N + P
Sbjct: 365 SVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKM-P 423
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD----HITFTSILSACSHAGLI 431
E S W L+ + + R A Q+ + ++PD H+ +++ +A + +
Sbjct: 424 FEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQ--LEPDNGGNHVLLSNVYAASGNWENV 481
Query: 432 DEGRKCFAD 440
RK D
Sbjct: 482 LMARKYLKD 490
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/560 (37%), Positives = 332/560 (59%), Gaps = 9/560 (1%)
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+G +HG +I+ GF + V L++ Y+K K+FD + +W+ +I+++
Sbjct: 25 KGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFA 84
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q + P AL F++ + GLL D T+ + A +V L + A ++H ++ A D+
Sbjct: 85 QNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVF 144
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QN 305
+ +S+V YA+CG+V AR VFD M ++++SW+ M+ GY Q G EAL LF Q+
Sbjct: 145 VGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQD 204
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
D + N T ++ C+ +LG++ HG ++ + ++++ +Y+KCG ++
Sbjct: 205 YDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEG 264
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
+F ++ RN+ WN ++ H H + E F +M GVKP+ ITF +L AC
Sbjct: 265 GYKVFEEV--KVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYAC 322
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
SHAGL+++G CF M + ++P +HYA +VD+LGRAG L EA +IK+MP+ P +SVW
Sbjct: 323 SHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVW 382
Query: 486 GALLLACRIHG--EIA---ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GALL CRIHG E+A A+ +F++ +G VL+SN YAA+ +W E + R+ M+++
Sbjct: 383 GALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRDQ 442
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK S +E G + F DR + +E+Y+K+E + E+ AGY+ D S L +V
Sbjct: 443 GIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEV 502
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+ +++ + YHSE+LA+AFG++ PE ++V KNLRVC DCH+A +FIS R IIV
Sbjct: 503 DGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIV 562
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD NRFH FE G C+C DYW
Sbjct: 563 RDNNRFHRFEDGKCTCGDYW 582
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 208/432 (48%), Gaps = 19/432 (4%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
Q+H + G +A+ L +I Y+ P+++ LF+S + + + W+++I ++
Sbjct: 28 QLHGQVIKLGF--EAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATT--WSSVISSF 83
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A N + L + M R G+ + +T P K+ A+ S + +H ++T D
Sbjct: 84 AQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDV 143
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V ++LVD YAKCG + KVFDEM +++VSW+ MI Y Q EEAL LF++ ++
Sbjct: 144 FVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQ 203
Query: 206 -------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
SV V AS + +LG + VHG +F + +S++++Y++
Sbjct: 204 DYDIRVNDFTLSSVLRVCSASTLFELG-----KQVHGLCFKTSFDSSCFVASSLISLYSK 258
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG VE VF+ ++ R+L WN+ML Q+ LF+EM+ KPN +T L L
Sbjct: 259 CGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCL 318
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ AC++ G + G G + ++ + ++D+ + G L+ A + ++ P +
Sbjct: 319 LYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEM-PMQP 377
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
S W L+ G +HG+ A ++ E G I + +A + AG +E +
Sbjct: 378 TESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVL-LSNAYAAAGRWEEAARAR 436
Query: 439 ADMTKLSVKPEV 450
M +K E
Sbjct: 437 KMMRDQGIKKET 448
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 141/325 (43%), Gaps = 9/325 (2%)
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+LSD I V + K +HG I F + + ++ Y++ +
Sbjct: 3 VLSDCRDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSL 62
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
+FD + +W+S+++ + QN AL F M P+ T + L
Sbjct: 63 KLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALS 122
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
S L H + + D + ++++D YAKCGD++ A +F+++ +NV SW+ +
Sbjct: 123 SLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEM--PHKNVVSWSGM 180
Query: 387 IAGYGMHGHGRKALEFFSQMLEE--GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
I GY G +AL F + LE+ ++ + T +S+L CS + L + G++ K
Sbjct: 181 IYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKT 240
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLF 504
S + ++ + + G + + + +++ + N +W A+L+AC H +
Sbjct: 241 SFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKV-RNLGMWNAMLIACAQHAHTGRTFEL 299
Query: 505 QLEPEHTG----YFVLMSNIYAASN 525
E E G + + +YA S+
Sbjct: 300 FEEMERVGVKPNFITFLCLLYACSH 324
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/689 (33%), Positives = 381/689 (55%), Gaps = 20/689 (2%)
Query: 7 STEGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
+ E Y +++ C L ++++ I + + S + L L +I Y G + A+
Sbjct: 258 ANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTL-LATSLISLYGQCGILDRAKG 316
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
L ++ + WN M+ A A NG E + L M G +N T+ VL+ACA+
Sbjct: 317 LLEHMYQRDVVA--WNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANL 374
Query: 124 SLILEGKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
+ +G+ +H ++ G L + V +++ MY KCGQT+ VF+ M +D VSW +
Sbjct: 375 EALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAV 434
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I A K ++AL LF + EGL S+ T++S+ A G L D+ A+ +H A F
Sbjct: 435 INASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGF 494
Query: 243 LED-LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ--NGQASEALLL 299
+ + NS+V MYARCG++ A+ FD +E++ L++W+ +L Y Q +G A
Sbjct: 495 GGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKF 554
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYA 358
F EM+ KP VT + + AC + + + GR H S ++ L N +++MY
Sbjct: 555 FQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYG 614
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG A+ +F+ + E+ + SWN LI Y +GH +AL +ML +G PD T
Sbjct: 615 KCGSPSDAKLVFDQM--PEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTS 672
Query: 419 TSILSACSHAGLIDEGRKCF-ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
SIL SHAGL++ G + F + + ++P C+VD+L R G L A ++I P
Sbjct: 673 VSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASP 732
Query: 478 LPPNDSV-WGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
D++ W LL AC+ +G+ A +F+LEP+H+G FV+++N+YA+ +W +
Sbjct: 733 ACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDAS 792
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
++R+ M+ +KK S IE + F + + +P +E+ + +E + + ++ AGY+P
Sbjct: 793 RIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVP 852
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
D + +HDVE+ D+E +L+ HSE+LA+ FG+M+ P ++V KNLRVC+DCH+A + IS
Sbjct: 853 DTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIIS 912
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ R+I+VRD++RFHHF+ G CSC D+W
Sbjct: 913 SVVGREIVVRDSSRFHHFKHGQCSCGDFW 941
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 242/471 (51%), Gaps = 11/471 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH + GL + LG ++ Y + G + +S+F+ + +S LW TMI
Sbjct: 179 RKIHHRIINEGLEPDGI-LGNALVHMYGSCGSFDDMKSVFSRM--GQSSVLLWTTMIAGC 235
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ NG E L ++ M G+ +N T+ +++ C + + EG+++ I+ + F S +
Sbjct: 236 SQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSST 295
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ +L+ +Y +CG D + + M RD+V+W M+TA Q EA+ L ++ E
Sbjct: 296 LLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDME 355
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA-ICNAFLEDLCIQNSIVAMYARCGNVEK 264
G ++ VT +SV A L + + + +H +C ++ + NS++ MY +CG E
Sbjct: 356 GFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEA 415
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A VF+ M ++D +SWN+++ + N + +AL LF M+ + N T L L+ AC
Sbjct: 416 AMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGG 475
Query: 325 LGSRQLGRKFHGYIINSNMKIDAT-LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L +L R+ H ++T + N+V++MYA+CG L A+ F+ + E+ + +W
Sbjct: 476 LEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLE--EKGLVAW 533
Query: 384 NVLIAGYGMH--GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
++++A Y G GR+A +FF +M EG+KP +TF S L AC+ ++ GR
Sbjct: 534 SIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRA 593
Query: 442 TKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
V+ + +++M G+ G +A + QMP S W +L++A
Sbjct: 594 AASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLIS-WNSLIVA 643
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 220/452 (48%), Gaps = 8/452 (1%)
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
F W M+ AY+ NGH E LEL++ M+ G + F L ACA++ + G+ +H
Sbjct: 24 FSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSS 83
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
++ +G S+ + +LV+MY KC KVFD M +RD+VSWT M+ Y Q +A
Sbjct: 84 VVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQA 143
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
L + EG+ + VT V++ +L + + +H I D + N++V M
Sbjct: 144 LECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHM 203
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y CG+ + + VF M + ++ W +M+ G QNGQ E LL+F +M K N VT
Sbjct: 204 YGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTY 263
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ +V C L + + G I+ S L +++ +Y +CG LD A+ + H
Sbjct: 264 MSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLE--HM 321
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+R+V +WN ++ +G +A+ +M EG + +T+ S+L AC++ + +GR
Sbjct: 322 YQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGR 381
Query: 436 KCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA--- 491
+ A + ++ EV ++ M G+ G A + + MP +D W A++ A
Sbjct: 382 EIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMP-RKDDVSWNAVINASVG 440
Query: 492 -CRIHGEIAANYLFQLEPEHTGYFVLMSNIYA 522
+ + + +LE + F L+S + A
Sbjct: 441 NSKFQDALELFHGMELEGLRSNEFTLLSLLEA 472
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 204/408 (50%), Gaps = 8/408 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQIHSS+ SGL + + + ++ Y + A +F+ + S W M+ Y
Sbjct: 78 RQIHSSVVGSGLTSNII-ISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVS--WTAMLAVY 134
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A NG + LE S M G+ N TF ++ CA L+ G+ +H II G D
Sbjct: 135 AQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDG 194
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ ALV MY CG DD VF M ++ WT MI Q + EE L++F+K E
Sbjct: 195 ILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLE 254
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ ++ VT +S+ L V + + + + + F + S++++Y +CG +++A
Sbjct: 255 GVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRA 314
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+ + + M +RD+++WN+M+T QNG EA+ L M N VT L ++ AC L
Sbjct: 315 KGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANL 374
Query: 326 GSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
+ GR+ H ++ ++ + + N+V+ MY KCG + A ++F + P + +V SWN
Sbjct: 375 EALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAM-PRKDDV-SWN 432
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+I + + ALE F M EG++ + T S+L AC GL D
Sbjct: 433 AVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC--GGLED 478
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 173/344 (50%), Gaps = 3/344 (0%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY KC + D VFD +S +++ SWT+M+ AY Q EAL LF + Q EG D V
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
V A G++ + +H + + ++ I NS+V MY +C +V A VFD M
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
RD++SW +ML Y QNG S+AL M KPN VT + +V C L LGRK
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
H IIN ++ D L NA++ MY CG D +++F+ + S +V W +IAG +
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQS--SVLLWTTMIAGCSQN 238
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY 453
G + L F +M EGVK + +T+ S++ C + + EG A + +
Sbjct: 239 GQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLA 298
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
++ + G+ G L A +++ M + W A++ AC +G+
Sbjct: 299 TSLISLYGQCGILDRAKGLLEHM-YQRDVVAWNAMVTACAQNGD 341
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/681 (32%), Positives = 379/681 (55%), Gaps = 18/681 (2%)
Query: 11 FYDQLLKS---CNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
FY L+ L +LR +H+++ SG LG K+I Y G AR LF+
Sbjct: 3 FYSSLIAQSAHTKSLTTLRAVHTNVIKSGF--SYSFLGHKLIDGYIKCGSLAEARKLFDE 60
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ + WN+MI ++ ++G E +E Y M G+ ++YTF + KA + LI
Sbjct: 61 L--PSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIR 118
Query: 128 EGKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
G+ HG + G + D +V +ALVDMYAK + D VF + +D+V +T +I Y
Sbjct: 119 HGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGY 178
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q EAL +F+ G+ + T+ + G LGD++ Q +HG + + +
Sbjct: 179 AQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVV 238
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
Q S++ MY+RC +E + VF+ ++ + ++W S + G +QNG+ A+ +F EM
Sbjct: 239 ASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRC 298
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
PNP T ++ AC+ L ++G + H + + + A++++Y KCG++D A
Sbjct: 299 SISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKA 358
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
++F+ + +E +V + N +I Y +G G +ALE F ++ G+ P+ +TF SIL AC+
Sbjct: 359 RSVFDVL--TELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACN 416
Query: 427 HAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
+AGL++EG + FA + +++ + H+ CM+D+LGR+ L EA +I+++ P+ +W
Sbjct: 417 NAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLW 475
Query: 486 GALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
LL +C+IHGE+ + + +L P G +L++N+YA++ KW +V +++ +++
Sbjct: 476 RTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDL 535
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
LKK A S ++ +++ F D +P E+++ + + ++K GY P+ L D+
Sbjct: 536 KLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDL 595
Query: 601 EDEDREHMLNYHSEKLAVAFGIM-NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
++E + L YHSEKLA+A+ + + +++ KNLRVC DCHS +F+S + R II
Sbjct: 596 DEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDII 655
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
RD+ RFHHF+GG CSC DYW
Sbjct: 656 ARDSKRFHHFKGGLCSCKDYW 676
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/562 (38%), Positives = 328/562 (58%), Gaps = 42/562 (7%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
++ Y + + D +FD+M RDL SW VM+T Y + + A LF++ + D
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPER----D 56
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE------- 263
V+ ++ S Q G V +A+ + L++ N ++A Y + G +E
Sbjct: 57 IVSWNAMLSGYAQNGFVDEAREI----FYKMPLKNGISWNGLLAAYVQNGRIEDAKRLFE 112
Query: 264 -------------------KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
K R +FD M +RD ISW++M+ GY QNG + EAL F EMQ
Sbjct: 113 SKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQ 172
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ N + +S C+ + + +LGR+ H ++ + + + NA++ MY KCG +D
Sbjct: 173 RDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSID 232
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
A + F +I E++V SWN +I GY HG G +AL F M G++PD T S+L+A
Sbjct: 233 EARDAFQEI--LEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAA 290
Query: 425 CSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CSHAGL+D+G + F M + + ++ HY CMVD+LGRAG L EA +++K MP P+ +
Sbjct: 291 CSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAA 350
Query: 484 VWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
WGALL A RIHG E AA +F++EP ++G ++L+S +YAAS +W + GK+R +M+
Sbjct: 351 TWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMR 410
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
NKG+KK +S +E I F D +P+ ++Y +E M +++K GY+ + H
Sbjct: 411 NKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFH 470
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
DVE+E++ HML YHSEKLAVA+GI+ + ++V KNLRVC DCH+A ++IS I R I
Sbjct: 471 DVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLI 530
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
I+RD +RFH+FEGG+CSC D+W
Sbjct: 531 ILRDNHRFHYFEGGSCSCRDFW 552
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 177/365 (48%), Gaps = 24/365 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGI 106
++ Y + TAR+LF + S WN M+ YA NG E E++ M ++GI
Sbjct: 32 MLTGYVRNRDLKTARALFERMPERDIVS--WNAMLSGYAQNGFVDEAREIFYKMPLKNGI 89
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
S N +L A N I + K + + +S + + V
Sbjct: 90 SWNG-----LLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRR---------N 135
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD M RD +SW+ MI Y Q EEAL F + Q++ + + S +
Sbjct: 136 LFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAA 195
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ + +H + + + N+++AMY +CG++++AR F + ++D++SWN+M+ G
Sbjct: 196 LELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHG 255
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y ++G EAL +F+ M+ + +P+ T + +++AC++ G G ++ Y +N + I
Sbjct: 256 YARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYF-YSMNRDYGIT 314
Query: 347 ATL--RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALE 401
A L ++D+ + G L+ A+N+ ++ P E + ++W L+ +HG+ G KA +
Sbjct: 315 AKLVHYTCMVDLLGRAGQLEEAQNLMKNM-PFEPDAATWGALLGASRIHGNTELGEKAAQ 373
Query: 402 FFSQM 406
+M
Sbjct: 374 IIFEM 378
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 17/256 (6%)
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
R+LF+++ S S W+ MI Y+ NG E L + M+R N +F L C+
Sbjct: 134 RNLFDNMPQRDSIS--WSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCS 191
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
+ + + G+ +H +++ G+ + YV AL+ MY KCG D+ F E+ +D+VSW
Sbjct: 192 NIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNT 251
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV-----HGY 236
MI Y + EEAL +F+ + G+ D T+VSV +A G V + Y
Sbjct: 252 MIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDY 311
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKAR-LVFDMMEKRDLISWNSMLT-----GYIQN 290
I + C +V + R G +E+A+ L+ +M + D +W ++L G +
Sbjct: 312 GITAKLVHYTC----MVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTEL 367
Query: 291 GQASEALLLFDEMQNS 306
G+ + ++ E NS
Sbjct: 368 GEKAAQIIFEMEPHNS 383
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/676 (34%), Positives = 372/676 (55%), Gaps = 53/676 (7%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGE--PNTARSLFNSIHNDK 72
LL SC L +L QIH G+ + G I+ + + P R L D
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD- 69
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKV 131
+F++NT++R Y+ + ++ ++ M R G + +S++F FV+KA + + G
Sbjct: 70 --AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++ G S +V L+ MY CG + KVFDEM +LV+W +ITA +
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
A +F K + + N
Sbjct: 188 VAGAREIFDKM---------------------------------------LVRNHTSWNV 208
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++A Y + G +E A+ +F M RD +SW++M+ G NG +E+ L F E+Q + PN
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V+ ++SAC+ GS + G+ HG++ + ++ NA++DMY++CG++ A +F
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +R + SW +IAG MHG G +A+ F++M GV PD I+F S+L ACSHAGLI
Sbjct: 329 GMQ-EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLI 387
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F++M ++ ++PE++HY CMVD+ GR+G L +A+D I QMP+PP VW LL
Sbjct: 388 EEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLG 447
Query: 491 ACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC HG I L +L+P ++G VL+SN YA + KW++V +R+ M + +KK
Sbjct: 448 ACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKT 507
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDVEDED 604
A+S++E GK + F ++ E ++K++ + + +K AGY P+++ AL+DVE+E+
Sbjct: 508 TAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEE 567
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E ++ HSEKLA+AF + L+ A +++ KNLR+C DCH+ + S +Y +I+VRD N
Sbjct: 568 KEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRN 627
Query: 665 RFHHFEGGTCSCNDYW 680
RFH F+ G+CSC DYW
Sbjct: 628 RFHSFKDGSCSCRDYW 643
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/723 (34%), Positives = 376/723 (52%), Gaps = 102/723 (14%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA--NNGHCVETLELYSTMRRSGISSN 109
Y++ G A+ LFN+ + +N MI AY+ N+GH L L+ M+R G +
Sbjct: 81 YSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHA--ALNLFVQMKRYGFLPD 138
Query: 110 SYTFPFVLKACASNSLILEG----KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD--- 162
+TF VL A SLI + +++H ++I+ G L V AL+ Y C +
Sbjct: 139 PFTFSSVLSAL---SLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVK 195
Query: 163 ------DGCKVFDE------------------------MSVRDL---------VSWTVMI 183
KVFDE ++ R+L V+W MI
Sbjct: 196 SSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMI 255
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG----QLGDVLKAQAVHGYAIC 239
+ Y + EEA F++ G+ D T S+ SA G ++G + VHGY I
Sbjct: 256 SGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGY-IL 314
Query: 240 NAFLED-----LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI------ 288
+E L + N+++ Y + + +AR VFD M RD+ISWN++L+GY+
Sbjct: 315 RTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIE 374
Query: 289 -------------------------QNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
QNG E L LF++M++ +P ++AC+
Sbjct: 375 EANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACS 434
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
LGS G++ H +I + NA++ MY++CG +++AE++F + P +VS W
Sbjct: 435 VLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTM-PYVDSVS-W 492
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-T 442
N +IA HGHG KA+E F QM++E + PD ITF +IL+AC+HAGLI EGR F M T
Sbjct: 493 NAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCT 552
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI---- 498
+ + P HYA ++D+L RAG +A +IK MP +W ALL CRIHG +
Sbjct: 553 RYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGI 612
Query: 499 -AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA+ L +L P G ++++SN+YAA +W EV ++R M+ +G+KK S +E +
Sbjct: 613 QAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMV 672
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D +P + VY ++ + E+K GY+PD LHD+E E +EH L+ HSEKLA
Sbjct: 673 HVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLA 732
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
V +GIM L A ++V KNLR+C DCH+AF++IS + R+I+VRD RFHHF+ G CSC
Sbjct: 733 VVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCG 792
Query: 678 DYW 680
+YW
Sbjct: 793 NYW 795
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 202/477 (42%), Gaps = 51/477 (10%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L+KS +AS R++ + + + +I Y + AR L + +
Sbjct: 193 LVKSSQLMASARKVFDETPKNQIYEPSW---TTMIAGYVRNDDLVAARELLDGL--TYPI 247
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS----NSLILEGK 130
WN MI Y G E + + M GI + YT+ ++ AC S + G+
Sbjct: 248 DVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGR 307
Query: 131 VVHGDIIRTGFLSDSY----VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
VHG I+RT + V AL+ Y K + + +VFD+M VRD++SW +++ Y
Sbjct: 308 QVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGY 367
Query: 187 EQAEKPEEA-------------------------------LILFQKTQQEGLLSDSVTIV 215
A++ EEA L LF + + EGL
Sbjct: 368 VNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFA 427
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
+A LG + Q +H I L N+++ MY+RCG VE A VF M
Sbjct: 428 GAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYV 487
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
D +SWN+M+ Q+G +A+ LF++M D P+ +T L +++AC + G + GR +
Sbjct: 488 DSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYF 547
Query: 336 GYIINSNMKIDATLRNA-VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
+ A ++D+ + G A+++ + P E W L+AG +HG
Sbjct: 548 DTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSM-PFEAGAPIWEALLAGCRIHG 606
Query: 395 HGRKALEFFSQMLE--EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
+ ++ ++LE G +I +++ +A G DE + M + VK E
Sbjct: 607 NMELGIQAADRLLELIPGQDGTYIILSNMYAAL---GQWDEVARVRLLMRERGVKKE 660
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 200/494 (40%), Gaps = 121/494 (24%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE------------------ 170
+ VH I+ +GF ++++ L+++Y K K+FD+
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83
Query: 171 ---------------MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
+++RD VS+ MITAY AL LF + ++ G L D T
Sbjct: 84 SGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFS 143
Query: 216 SVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGN---------VEKA 265
SV SA+ + D + Q +H I L + N++++ Y C + + A
Sbjct: 144 SVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASA 203
Query: 266 RLVFDMMEKRDL---------------------------------ISWNSMLTGYIQNGQ 292
R VFD K + ++WN+M++GY++ G
Sbjct: 204 RKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGL 263
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSAC----TYLGSRQLGRKFHGYIINSNM----- 343
EA F M + + + T L+SAC +G GR+ HGYI+ + +
Sbjct: 264 YEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHH 323
Query: 344 --------------KIDATLR----------------NAVMDMYAKCGDLDTAENMFNDI 373
K D + NAV+ Y ++ A ++F+++
Sbjct: 324 FVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEM 383
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
ERNV +W V+I+G +G G + L+ F+QM EG++P F ++ACS G +D
Sbjct: 384 --PERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDN 441
Query: 434 GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLAC 492
G++ + + +L + ++ M R G + A + MP DSV W A++ A
Sbjct: 442 GQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYV--DSVSWNAMIAAL 499
Query: 493 RIHGE-IAANYLFQ 505
HG + A LF+
Sbjct: 500 AQHGHGVKAIELFE 513
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/607 (35%), Positives = 344/607 (56%), Gaps = 40/607 (6%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T+ +++ C+ + EGK VH I +GF+ + L+ MYAKCG D KVFDEM
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 172 SVRDLV-------------------------------SWTVMITAYEQAEKPEEALILFQ 200
RDL SWT M+T Y + ++PEEAL+L+
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGD-VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
Q+ ++ VS+A A + + + +HG+ + D + +S++ MY +C
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G +++AR +FD + ++D++SW SM+ Y ++ + E LF E+ S +PN T ++
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+AC L + +LG++ HGY+ + ++++DMY KCG++++A+++ + + +
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC--PKPD 384
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
+ SW LI G +G +AL++F +L+ G KPDH+TF ++LSAC+HAGL+++G + F
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 440 DMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI 498
+T K + HY C+VD+L R+G + +I +MP+ P+ +W ++L C +G I
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 499 -----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
AA LF++EPE+ +V M+NIYAA+ KW E GK+R+ M+ G+ K S E
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F AD +P + ++ + + + ++K GY+P S LHDVEDE +E L YHS
Sbjct: 565 KRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 624
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLAVAF I++ ++V KNLR C DCH A +FIS I +RKI VRD+ RFH FE G
Sbjct: 625 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQ 684
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 685 CSCGDYW 691
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 218/443 (49%), Gaps = 18/443 (4%)
Query: 11 FYDQLLK---SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+++LL+ C L R++ + L + + ++ Y G AR LF+
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNV-----MVNGYAEVGLLEEARKLFDE 176
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLI 126
+ SYS W M+ Y E L LYS M+R S N +T + A A+ I
Sbjct: 177 MTEKDSYS--WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
GK +HG I+R G SD + ++L+DMY KCG D+ +FD++ +D+VSWT MI Y
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY 294
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
++ + E LF + + T V +A L + VHGY F
Sbjct: 295 FKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS 354
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+S+V MY +CGN+E A+ V D K DL+SW S++ G QNGQ EAL FD + S
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLD 364
KP+ VT + ++SACT+ G + G +F Y I ++ T + ++D+ A+ G +
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFF-YSITEKHRLSHTSDHYTCLVDLLARSGRFE 473
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH-ITFTSILS 423
+++ +++ P + + W ++ G +G+ A E ++ + ++P++ +T+ ++ +
Sbjct: 474 QLKSVISEM-PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMAN 530
Query: 424 ACSHAGLIDEGRKCFADMTKLSV 446
+ AG +E K M ++ V
Sbjct: 531 IYAAAGKWEEEGKMRKRMQEIGV 553
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 25/279 (8%)
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP T L+ C+ + + G+K H +I S + N ++ MYAKCG L A
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+++ R++ SWNV++ GY G +A + F +M E+ D ++T++++
Sbjct: 142 VFDEM--PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKK 195
Query: 429 GLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDM---IKQMPLPPNDSV 484
+E ++ M ++ + +P + + V C+ ++ I + L ++ +
Sbjct: 196 DQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL 255
Query: 485 WGALLLACRIHGEI--AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
W +L+ G I A N ++ + + M + Y S++WRE L ++
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SC 314
Query: 543 KKP------------AAFSVIEYGKDIQGFHTADRVNPY 569
++P A + E GK + G+ T +PY
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/634 (34%), Positives = 358/634 (56%), Gaps = 14/634 (2%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL +C L L+ Q+HS L +G+ + + G+ + + Y G+ TA +FNS +D
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDL-YVKCGDVETALVIFNS--SD 306
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
++ LWN M+ A+ ++ EL+ M+ +GI N +T+P +L+ C I G+
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++TGF SD YV L+DMY+K G + +V + + +D+VSWT MI Y Q E
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
++AL F++ Q+ G+ D++ + S S + + + +H + + D+ I N+
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V +YARCG + +A F+ ME +D I+ N +++G+ Q+G EAL +F M S K N
Sbjct: 487 LVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHN 546
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + +SA L + G++ H +I + + + NA++ +Y KCG + A+ F+
Sbjct: 547 VFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFS 606
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
++ SERN SWN +I HG G +AL+ F QM +EG+KP+ +TF +L+ACSH GL+
Sbjct: 607 EM--SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664
Query: 432 DEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F M+ + ++P HYAC++D+ GRAG L A I++MP+ + VW LL
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC++H GE AA +L +LEP + +VL+SN YA + KW ++R+ M+++G++K
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE 784
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE + F DR++P +++Y + + + GY + HD E E R
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGR 844
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ HSEKLAV FG+M+L P ++V KNLRV
Sbjct: 845 DPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/465 (29%), Positives = 234/465 (50%), Gaps = 7/465 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
+IH+ T GL + +G +I Y+ G AR +F + + S W M+ YA
Sbjct: 63 EIHAKAVTRGLGKYRI-VGNLLIDLYSKNGLVLPARRVFEELSARDNVS--WVAMLSGYA 119
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG E L LY M R+G+ Y VL +C L +G+++H + GF S+ +
Sbjct: 120 QNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIF 179
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V A++ +Y +CG +VF +M RD V++ +I+ + Q E AL +F++ Q G
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSG 239
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
L D VTI S+ +A LGD+ K +H Y D ++ S++ +Y +CG+VE A
Sbjct: 240 LSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL 299
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
++F+ ++ +++ WN ML + Q +++ LF +MQ + +PN T ++ CT
Sbjct: 300 VIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTR 359
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
LG + H + + + D + ++DMY+K G L+ A + + E++V SW +
Sbjct: 360 EIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML--KEKDVVSWTSM 417
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
IAGY H + AL F +M + G+ PD+I S +S C+ + +G + A +
Sbjct: 418 IAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGY 477
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+V + +V++ R G + EAF ++M L D + G L++
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEMEL--KDGITGNGLVS 520
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR-QL 330
M +R S L G++ + ++ L LF + P+ + AC G R Q+
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
+ H + + + N ++D+Y+K G + A +F ++ S R+ SW +++GY
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL--SARDNVSWVAMLSGY 118
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+G G +AL + QM GV P +S+LS+C+ A L +GR A K E+
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI 178
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMP 477
++ + R G A + MP
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMP 205
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/702 (34%), Positives = 377/702 (53%), Gaps = 86/702 (12%)
Query: 12 YDQLLKSCNFLAS---LRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y L+++C+ S +Q+H+ + G + +++ +I ++ A +FN
Sbjct: 216 YPLLIQACSIRRSEWEAKQVHNHVLKLGF-DSDVYVRNTLINCFSVCSNMTDACRVFNES 274
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S S WN+++ Y G+ E +Y M I ASNS+I+
Sbjct: 275 SVLDSVS--WNSILAGYIEIGNVEEAKHIYHQMPERSI-------------IASNSMIV- 318
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
++ G + CK+FDEM +D+V+W+ +I ++Q
Sbjct: 319 -------------------------LFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQ 353
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG------------- 235
E EEA+ F + G++ D V VS SA L V + +H
Sbjct: 354 NEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINL 413
Query: 236 -------YAICN-----------AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
Y+ C A+L DL NS+++ Y +C V+ A+ +FD M ++D+
Sbjct: 414 QNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDV 473
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
+SW+SM++GY QN E L LF EMQ S KP+ T + ++SAC L + + G+ H Y
Sbjct: 474 VSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAY 533
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
I + + I+ L ++DMY KCG ++TA +F + E+ +S+WN LI G M+G
Sbjct: 534 IKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM--IEKGISTWNALILGLAMNGLVE 591
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACM 456
+L+ FS M + V P+ ITF +L AC H GL+DEG+ F M ++P VKHY CM
Sbjct: 592 SSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCM 651
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHT 511
VD+LGRAG L EA +++ +MP+ P+ + WGALL AC+ HG+ L +L+P+H
Sbjct: 652 VDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHD 711
Query: 512 GYFVLMSNIYAASNKWREVGKLREDM-KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYW 570
G+ VL+SNIYA+ KW +V ++R M K++ LK P S+IE I F D+ +P
Sbjct: 712 GFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGC-SMIEANGVIHEFLAGDKTHPDM 770
Query: 571 KEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
+ + MA+++K+ GY PD++ L DV++E++E L HSEKLA+AFG++N++P
Sbjct: 771 DAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTP 830
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
+++ KNLR+CNDCH+A + IS + RKI+VRD +RFHHFE G
Sbjct: 831 IRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/656 (34%), Positives = 367/656 (55%), Gaps = 13/656 (1%)
Query: 18 SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFL 77
S + +A IHS +SGL + ++ L ++ Y+T G+ + A SLF ++ S
Sbjct: 258 SSDLVALGSGIHSLCVSSGL-HCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVIS-- 314
Query: 78 WNTMIRAYANNGHCVETLE-LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WNTMI +Y + CVE LE L ++ NS TF L AC+S ++ G+ +H I
Sbjct: 315 WNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMI 374
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++ + + +L+ MY+KC +D +VF+ M D+VS V+ Y E A+
Sbjct: 375 LQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAM 434
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAM 255
+F + G+ + +T++++ LGD+ +H Y L D I NS++ M
Sbjct: 435 RVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITM 494
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
YA CG++E + +F + + +ISWN+++ +++G+ EA+ LF + Q++ K +
Sbjct: 495 YATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCL 554
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+S+ L S + G + HG + + + D+ + NA MDMY KCG +D D P
Sbjct: 555 AECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPD--P 612
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+ R WN LI+GY +G+ ++A + F M+ G KPD++TF ++LSACSHAGLID+G
Sbjct: 613 AHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGM 672
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ M V P +KH C+VD+LGR G EA I +MP+ PND +W +LL + R
Sbjct: 673 DYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRT 732
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H G AA L +L+P +VL+SN+YA + +W +V KLR MK L K A S
Sbjct: 733 HKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACS 792
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
++ ++ F DR + + +++Y K++ + ++++ GY+ D S ALHD ++E +EH L
Sbjct: 793 WLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNL 852
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
HSEKLA+A+G++ + + +++ KNLRVC DCH F+ +S ++ R+I++RD R
Sbjct: 853 WNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYR 908
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 198/405 (48%), Gaps = 8/405 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL---ILEGKVVHG 134
W T + A G L MR + + + ++ AC G +H
Sbjct: 9 WYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHA 68
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
R G + + Y+ AL+ +Y G + ++F EM R++VSWT ++ A EE
Sbjct: 69 LTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEE 128
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL+ +++ ++EG++ ++ + +V S G L D + V + + + L + + NS++
Sbjct: 129 ALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLIT 188
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
M+ V+ A +FD ME+RD ISWN+M++ Y S+ ++ +M++ + KP+ T
Sbjct: 189 MFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTT 248
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
LVS C LG H ++S + L NA+++MY+ G LD AE++F ++
Sbjct: 249 LCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNM- 307
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE--EGVKPDHITFTSILSACSHAGLID 432
S R+V SWN +I+ Y +ALE Q+L+ EG P+ +TF+S L ACS +
Sbjct: 308 -SRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG-PPNSMTFSSALGACSSPEALM 365
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
GR A + + S++ + ++ M + + + + + MP
Sbjct: 366 NGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP 410
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/663 (34%), Positives = 357/663 (53%), Gaps = 19/663 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IHS + T + ++ Y G A +F + WN M+ AY
Sbjct: 457 RKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAY 516
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A N E M + G+ ++ +F VL +C + E +V+ I+ +G+ S +
Sbjct: 517 AQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQ---EAQVLRMCILESGYRS-A 572
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL+ M+ +C + + VFDEM D+VSWT M++A + +E LF++ Q E
Sbjct: 573 CLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLE 632
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G++ D T+ + + + +H D+ ++N+++ MY+ CG+ +A
Sbjct: 633 GVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREA 692
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT--ALILVSACT 323
F+ M+ RDL+SWN M Y Q G A EA+LLF MQ KP+ +T + VS +
Sbjct: 693 LSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGS 752
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L S G+ FHG S + D ++ ++ +YAKCG LD A ++F + V
Sbjct: 753 ALVSD--GKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRG--ACQWTVVLL 808
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I HG +A++ F +M +EGV+PD T SI+SAC HAG+++EG F M +
Sbjct: 809 NAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKE 868
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----E 497
+ P ++HYAC VD+LGRAG L A +I++MP N VW +LL C++ G E
Sbjct: 869 YFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGE 928
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
A + +L+P ++ V++SNIY A+ KW++ R+ + ++ +K S +E GK +
Sbjct: 929 RCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQV 988
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F DR +P E+Y ++ + + ++ AGY D D EDE +E L YHSE++A
Sbjct: 989 HEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADKGL---DAEDELKEKALGYHSERIA 1045
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+AFG++ P+ +++ KNLRVC DCH+A ++IS I R+IIVRD+ RFHHF GTCSC
Sbjct: 1046 IAFGLIATPPDTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCK 1105
Query: 678 DYW 680
D W
Sbjct: 1106 DCW 1108
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 243/495 (49%), Gaps = 22/495 (4%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LL+SC N LA ++ H + +GL Q L LG +I Y G A ++F+ +
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGL-EQHLFLGNCLINMYVRCGSLEEAHAIFSKM 86
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLIL 127
S W +I A A +G L+ TM S + NSYT +L ACA++ +
Sbjct: 87 EERNVVS--WTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLA 144
Query: 128 EGKVVHGDIIRTGFLSDS----YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
G+ +H I G +S V A+++MYAKCG +D VF + +D+VSWT M
Sbjct: 145 IGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMA 204
Query: 184 TAYEQAEK-PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
AY Q + +AL +F++ + L + +T ++ A L D +H
Sbjct: 205 GAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAGL 261
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR---DLISWNSMLTGYIQNGQASEALLL 299
D N+++ MY +CG+ E A VF M R DL+SWN+M++ ++ G+ +A+ +
Sbjct: 262 GFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAI 321
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLG-SRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
F ++ +PN VT + +++A G RKFHG I S D + NA++ MYA
Sbjct: 322 FRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYA 381
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG A +F I + +V SWN ++ K + F ML G+ P+ ++F
Sbjct: 382 KCGFFSAAWTVFRRIR-WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSF 440
Query: 419 TSILSACSHAGLIDEGRKCFA-DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+IL+ACS++ +D GRK + +T+ E +V M G+ G + EA + K+MP
Sbjct: 441 IAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMP 500
Query: 478 LPPNDSV-WGALLLA 491
LP V W +L A
Sbjct: 501 LPSRSLVTWNVMLGA 515
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/613 (35%), Positives = 351/613 (57%), Gaps = 12/613 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA--CASNSLILEGKVVHGD 135
+ I A + + L ++ M R G+ N +TFP KA CA G +H
Sbjct: 79 FTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHAL 138
Query: 136 IIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+R G+L D +V A +DMY K G ++F+EM R++++W ++T +P E
Sbjct: 139 ALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLE 198
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+ ++ G + + V++ + +A + + HG+ + F D+ + N++V
Sbjct: 199 TFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVD 258
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
Y +C KAR VFD M R+ +SW SM+ Y Q+G +AL ++ +N+ +P
Sbjct: 259 FYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFM 318
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+++ C L GR H + S + + + +A++DMY KCG ++ AE +F D+
Sbjct: 319 VSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDM- 377
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDE 433
ERN+ +WN +I GY G + AL F M+ G P+HIT ++++ACS GL +
Sbjct: 378 -PERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKD 436
Query: 434 GRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
G + F M + V+P +HYAC+VD+LGRAG A+++I++MP+ P+ SVWGALL AC
Sbjct: 437 GYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGAC 496
Query: 493 RIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
++HG+ IA+ LF+L+P+ +G VL+SN+ A++ +W E +R++MKN G+KK
Sbjct: 497 KMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPG 556
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S I + + F+ D + E+ + + +++ +GYMPD +L+DVE+E++E
Sbjct: 557 CSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKET 616
Query: 608 MLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFH 667
+ HSEKLA+AFG++++ P +++TKNLR+C DCH AF+F+S I R+IIVRD NRFH
Sbjct: 617 EVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFH 676
Query: 668 HFEGGTCSCNDYW 680
+F+ CSC DYW
Sbjct: 677 YFKQFECSCKDYW 689
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/679 (32%), Positives = 367/679 (54%), Gaps = 16/679 (2%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ ++K C L +L R HS+ GL+ ++ G ++ Y G A +F+ +
Sbjct: 110 FPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGM 169
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLIL 127
+ WN+M+ Y +NG L+ + M + + L AC +S ++
Sbjct: 170 PVRDIVT--WNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALM 227
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+G+ VH +IR G D V +L+DMY KCG +F M R +V+W MI Y
Sbjct: 228 QGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYA 287
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
PEEA F + + EG + VT +++ +A Q L ++VHGY + FL +
Sbjct: 288 LNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVV 347
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
++ +++ MY++ G V+ + +F M + L+SWN+M+ Y+ +EA+ LF E+ N
Sbjct: 348 LETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQP 407
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
P+ T +V A LG + R+ H YI+ + + + NAVM MYA+CGD+ ++
Sbjct: 408 LYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSR 467
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + + ++V SWN +I GY +HG G+ ALE FS+M G++P+ TF S+L+ACS
Sbjct: 468 KIFDKM--AGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSV 525
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+G+ DEG F M + + P+++HY CM D+LGRAG L E I+ +P+ P +WG
Sbjct: 526 SGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWG 585
Query: 487 ALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
+LL A R +I AA +F+LE ++TG +V++S++YA + +W +V ++R M KG
Sbjct: 586 SLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKG 645
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
L++ A S++E F D +P K +++ + ++ +I Y +LS +
Sbjct: 646 LRRTDARSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGETDYPRNLSDPISLT- 704
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
R + N HS +LAV FG+++ A + V KN+R+CN CH A + IS RR+I+V
Sbjct: 705 -SRRTIIPNKHSVRLAVVFGLISSEARAPILVKKNVRICNHCHHALKLISKYSRRRIVVG 763
Query: 662 DANRFHHFEGGTCSCNDYW 680
D N +H F G+C C DYW
Sbjct: 764 DTNIYHEFLDGSCCCGDYW 782
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 235/502 (46%), Gaps = 41/502 (8%)
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+FL N +IR +A+ G L Y M +G + +TFP V+K CA + EG+ H
Sbjct: 72 AFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHS 131
Query: 135 DIIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
IR G + S+ Y +L+ YAK G D +VFD M VRD+V+W M+ Y
Sbjct: 132 AAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGA 191
Query: 194 EALILFQKTQQEGL--LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
AL F++ EGL D V I++ +A +++ + VH Y I + +D+ + S
Sbjct: 192 LALDCFRE-MHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTS 250
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY +CG + A +F M R +++WN M+ GY NG EA F +M+ +
Sbjct: 251 LLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVE 310
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VTA+ L++AC S GR HGY+ S L A+++MY+K G + ++E +F
Sbjct: 311 VVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFG 370
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ + + + SWN +IA Y +A+ F ++L + + PD+ T ++++ A GL+
Sbjct: 371 QM--TNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLL 428
Query: 432 DEGRKCFADMTKLS------VKPEVKH-YACMVDML------------------------ 460
+ R+ + + +L V V H YA D++
Sbjct: 429 RQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGY 488
Query: 461 ---GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYL-FQLEPEHTGYFVL 516
G+ E F +K L PN+S + ++L AC + G ++ F L G
Sbjct: 489 AIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQ 548
Query: 517 MSNIYAASNKWREVGKLREDMK 538
+ + ++ G LRE +K
Sbjct: 549 IEHYGCMTDLLGRAGDLREVLK 570
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/576 (36%), Positives = 332/576 (57%), Gaps = 8/576 (1%)
Query: 96 ELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
E S R S SN +L+ CA N ++E K HG IIR D + L++ Y
Sbjct: 39 EEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAY 98
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
+KCG + +VFD M R LVSW MI Y + EAL +F + + EG TI
Sbjct: 99 SKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTIS 158
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
SV SA G D L+ + +H ++ +L + +++ +YA+CG ++ A VF+ M+ +
Sbjct: 159 SVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 218
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
++W+SM+ GY+QN EALLL+ Q + N T ++ AC+ L + G++ H
Sbjct: 219 SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMH 278
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
I S + + ++ +DMYAKCG L + +F+++ E+N+ WN +I+G+ H
Sbjct: 279 AVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ--EKNLELWNTIISGFAKHAR 336
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
++ + F +M ++G+ P+ +TF+S+LS C H GL++EGR+ F M T + P V HY+
Sbjct: 337 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 396
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPE 509
CMVD+LGRAG L EA+++IK +P P S+WG+LL +CR++ E+AA LF+LEPE
Sbjct: 397 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPE 456
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
+ G VL+SNIYAA+ +W E+ K R+ +++ +KK S I+ + F + +P
Sbjct: 457 NAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPR 516
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
+E+ ++++ ++ + GY P + LHDVE +E +L HSEKLA+ FG+M L +
Sbjct: 517 IREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESS 576
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
V++ KNLR+C DCH + S RR IIVRD NR
Sbjct: 577 PVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 612
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 204/398 (51%), Gaps = 10/398 (2%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y+ G AR +F+ + S WNTMI Y N E L+++ MR G
Sbjct: 94 LINAYSKCGFVELARQVFDGMLERSLVS--WNTMIGLYTRNRMESEALDIFLEMRNEGFK 151
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T VL AC N LE K +H ++T + YV AL+D+YAKCG D +V
Sbjct: 152 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 211
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F+ M + V+W+ M+ Y Q + EEAL+L+++ Q+ L + T+ SV A L +
Sbjct: 212 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 271
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
++ + +H + F ++ + +S V MYA+CG++ ++ ++F +++++L WN++++G+
Sbjct: 272 IEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGF 331
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKID 346
++ + E ++LF++MQ PN VT L+S C + G + GR+F + + + +
Sbjct: 332 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 391
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ ++D+ + G L A + I P + S W L+A ++ + A ++
Sbjct: 392 VVHYSCMVDILGRAGLLSEAYELIKSI-PFDPTASIWGSLLASCRVYKNLELAEVAAEKL 450
Query: 407 LEEGVKPD----HITFTSILSACSHAGLIDEGRKCFAD 440
E ++P+ H+ ++I +A I + RK D
Sbjct: 451 FE--LEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 486
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/582 (37%), Positives = 330/582 (56%), Gaps = 35/582 (6%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++R G + + L YA G+ D VF+ ++ S++ +I ++ Q+
Sbjct: 66 IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRL 125
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVG-QLGDVLKAQAVH---------------- 234
+ A + + G+ ++ T SV + + G VL QA+
Sbjct: 126 FDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDV 185
Query: 235 ----GYAICNAFLEDLCIQNSIVAM------YARCGNVEKARLVFDMMEKRDLISWNSML 284
G +C L D + S+V++ Y++ G ++KAR +F+ M++RD++ WN M+
Sbjct: 186 YARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMI 245
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
GY Q+G +E+L LF M + PN VT L ++SAC LG+ + GR H YI N ++
Sbjct: 246 GGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQ 305
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
I+ + A++DMY+KCG L+ A +F+ I +++V +WN +I GY MHG + AL+ F
Sbjct: 306 INVHVGTALIDMYSKCGSLEDARLVFDRIR--DKDVVAWNSMIVGYAMHGFSQHALQLFE 363
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRA 463
+M E G KP ITF ILSAC H GL++EGR F M K ++P+++HY CMV++LGRA
Sbjct: 364 EMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRA 423
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L EA+ ++K M + + +WG LL CR+H GE A +L + ++G +VL+S
Sbjct: 424 GHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLS 483
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
N+YAA+ W V K+R MK G++K S IE + F +R +P KE+Y +
Sbjct: 484 NMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLN 543
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ +K GY P LHD+ +E +E L HSEKLA+AFG+++ P V++ KNLR
Sbjct: 544 EINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLR 603
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC+DCH+ + IS I RKI++RD NRFHHFE G CSC DYW
Sbjct: 604 VCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 204/415 (49%), Gaps = 42/415 (10%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ L+ +A L QIH+SL GL + + L K+ Y G + + +FN+
Sbjct: 50 FASLIDKSKSVAHLLQIHASLLRRGLYHNPI-LNFKLQRSYAALGRLDCSVFVFNTFDEP 108
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+SF + +I ++ + YS M G+ N++TF VLK+C+ S GKV
Sbjct: 109 NVFSF--SAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLES----GKV 162
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYA-------------------------------KCGQ 160
+H I+ G SD YV+ LVD+YA K G+
Sbjct: 163 LHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGE 222
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
D +F+ M RD+V W VMI Y Q+ P E+L LF++ + + VT+++V SA
Sbjct: 223 LDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSA 282
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
GQLG + + +H Y ++ + +++ MY++CG++E ARLVFD + +D+++W
Sbjct: 283 CGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAW 342
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
NSM+ GY +G + AL LF+EM + KP +T + ++SAC + G + GR F ++
Sbjct: 343 NSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFF-RLMR 401
Query: 341 SNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
I+ + + ++++ + G L+ A + ++ + V W L+ +H
Sbjct: 402 DKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPV-LWGTLLGCCRLH 455
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/658 (36%), Positives = 378/658 (57%), Gaps = 26/658 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++H + T+GL++ + +G ++ Y G AR +F + S S WN+MI
Sbjct: 53 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVS--WNSMITGL 110
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NG +E +E Y +MRR I S+T L +CAS G+ +HG+ ++ G +
Sbjct: 111 DQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 170
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP-EEALILFQKTQQ 204
V AL+ +YA+ G ++ K+F M D VSW +I A +E+ EA+ F +
Sbjct: 171 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALR 230
Query: 205 EGLLSDSVTIVSVASA-----VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
G + +T SV SA G+LG + +HG A+ ++ +N+++A Y +C
Sbjct: 231 AGQKLNRITFSSVLSAVSSLSFGELG-----KQIHGLALKYNIADEATTENALIACYGKC 285
Query: 260 GNVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G ++ +F M E+RD ++WNSM++GYI N ++AL L M + + + +
Sbjct: 286 GEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 345
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+SA + + + G + H + + ++ D + +A++DMY+KCG LD A FN + R
Sbjct: 346 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM--PVR 403
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKC 437
N SWN +I+GY HG G +AL+ F+ M +G PDH+TF +LSACSHAGL++EG K
Sbjct: 404 NSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 463
Query: 438 FADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC-RIH 495
F M+ + P ++H++CM D+LGRAG L + D I +MP+ PN +W +L AC R +
Sbjct: 464 FESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRAN 523
Query: 496 G------EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
G + AA LFQLEPE+ +VL+ N+YAA +W ++ K R+ MK+ +KK A +S
Sbjct: 524 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 583
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
+ + F D+ +P +YKK++ + +++ AGY+P AL+D+E E++E +L
Sbjct: 584 WVTMKDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 643
Query: 610 NYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
+YHSEKLAVAF + + +++ KNLRVC DCHSAF++IS I R+II+RD+NR+
Sbjct: 644 SYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 203/402 (50%), Gaps = 14/402 (3%)
Query: 128 EGKVVHGDIIRTGFLSDSY-VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+G+ VHG +I TG + + LV+MYAKCG D +VF M +D VSW MIT
Sbjct: 51 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGL 110
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+Q EA+ +Q ++ +L S T++S S+ L Q +HG ++ ++
Sbjct: 111 DQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 170
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS--EALLLFDEMQ 304
+ N+++ +YA G + + R +F M + D +SWNS++ G + + + S EA+ F
Sbjct: 171 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GALASSERSLPEAVACFLNAL 229
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ K N +T ++SA + L +LG++ HG + N+ +AT NA++ Y KCG++D
Sbjct: 230 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMD 289
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
E +F+ + R+ +WN +I+GY + KAL+ ML+ G + D + ++LSA
Sbjct: 290 GCEKIFSRM-SERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 348
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
+ ++ G + A + ++ +V + +VDM + G L A MP+ N
Sbjct: 349 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV-RNSYS 407
Query: 485 WGALLLACRIHGE------IAANYLF--QLEPEHTGYFVLMS 518
W +++ HG+ + AN Q P+H + ++S
Sbjct: 408 WNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLS 449
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/663 (34%), Positives = 339/663 (51%), Gaps = 81/663 (12%)
Query: 94 TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVD 153
T + + +R + P LK+C S + + +H G D++V ++L+
Sbjct: 7 TSSVLNFLRHVSFPPDPRLLPSALKSC---SALRLARALHAAAAVAGVSRDAFVASSLLH 63
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY--------------------------- 186
Y + G T D V D M R +V W+ +I A+
Sbjct: 64 AYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVIT 123
Query: 187 --------EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
++ + +A++ + EG L D+ + SAVG +GDV + +HGY +
Sbjct: 124 WNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVV 183
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL--------------------- 277
D C+ +++ MY +CG ++ VFD D+
Sbjct: 184 KAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALR 243
Query: 278 --------------ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+SW S++ +QNG+ EA+ LF EMQ+ +PN VT ++ A
Sbjct: 244 LFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFA 303
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
+ + GR H + + D + +A++DMYAKCG + A +F + RNV SW
Sbjct: 304 NIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAM--PYRNVVSW 361
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT- 442
N +I GY MHG A+ F M KPD +TFT +L ACS AG +EGR F +M
Sbjct: 362 NAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQH 421
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----E 497
K + P ++HYACMV +LGRAG L +A+D+I QMP P+ +WG+LL +CR+HG E
Sbjct: 422 KHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAE 481
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+AA LFQLEPE+ G +VL+SNIYA+ W V +LR+ MK GLKK S IE +
Sbjct: 482 VAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKV 541
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
D +P + +K++ + +E++ G+ P LHDVE+++++ +L+ HSEKLA
Sbjct: 542 HMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLA 601
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VA G+++ + +QV KNLR+C DCH A +FIS RR+I VRD NRFHHF+ G CSC
Sbjct: 602 VALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCA 661
Query: 678 DYW 680
DYW
Sbjct: 662 DYW 664
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 186/392 (47%), Gaps = 47/392 (11%)
Query: 46 AKIIIKYTTYGEPNTARSLFNSIHND--KSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+ +I + ++G+ A L + +D + WN ++ +G + + M
Sbjct: 90 SALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHG 149
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
G ++ L A + G+ +HG +++ G D+ V AL+DMY KCG+ D+
Sbjct: 150 EGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADE 209
Query: 164 GCKVFDEMSVRD-----------------------------------LVSWTVMITAYEQ 188
+VFDE S D +VSWT ++ Q
Sbjct: 210 IVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQ 269
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ EA+ LF++ Q EG+ +SVTI V A + ++ ++ H +++ F D+ +
Sbjct: 270 NGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYV 329
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+++V MYA+CG V AR++F+ M R+++SWN+M+ GY +G+A A+ LF MQ+S
Sbjct: 330 GSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKE 389
Query: 309 KPNPVTALILVSACTYLGSRQLGRKF-----HGYIINSNMKIDATLRNAVMDMYAKCGDL 363
KP+ VT ++ AC+ G + GR + H + I+ M+ A + + + + G L
Sbjct: 390 KPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACM----VTLLGRAGKL 445
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
D A ++ N + P E + W L+ +HG+
Sbjct: 446 DDAYDIINQM-PFEPDGCIWGSLLGSCRVHGN 476
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/591 (36%), Positives = 337/591 (57%), Gaps = 48/591 (8%)
Query: 136 IIRTGFLSDSYVQAALVDMYAKCG--QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
+I TGF+SD++ + L+ D ++FD + + W M+ AY Q+ E
Sbjct: 52 MILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAE 111
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+AL+L++ + + D+ T V A + +H + + F D+ +QN+++
Sbjct: 112 KALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLI 171
Query: 254 AMYARCGNVEKARLVFDM----------------------------------MEKRDLIS 279
MYA CGN+ AR +FD M+++D++S
Sbjct: 172 NMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVS 231
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
W+++++GY QNG EAL++F EM + + + V + ++SAC +L + G+ HG +I
Sbjct: 232 WSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVI 291
Query: 340 NSNMKIDATLRNAVM----DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
++ L+NA++ DMY KCG ++ A +FN + E+ VSSWN LI G ++G
Sbjct: 292 RMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGM--EEKGVSSWNALIIGLAVNGL 349
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYA 454
++L+ FS+M GV P+ ITF +L AC H GL+DEGR FA M K ++P VKHY
Sbjct: 350 VERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYG 409
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPE 509
CMVD+LGRAG L EA +I+ MP+ P+ + WGALL AC+ HG E L +L+P+
Sbjct: 410 CMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPD 469
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
H G+ VL+SNI+A+ W +V ++R MK +G+ K S+IE + F D+ +P+
Sbjct: 470 HDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPW 529
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
+V + MA +KM GY PD + D+++E++E L HSEKLA+AFG++ ++P
Sbjct: 530 INKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPT 589
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLR+CNDCH+A + IS Y R+I+VRD +RFH+F+ G CSC DYW
Sbjct: 590 PIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 224/450 (49%), Gaps = 49/450 (10%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTT---YGEPNTARSLFNSIHNDK 72
L +C+ L +I S + +G I+ A ++K++T + + + +F+ I N
Sbjct: 36 LHNCHNLKQFNRILSQMILTGFISDTF--AASRLLKFSTDSPFIGLDYSLQIFDRIEN-- 91
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
S F+WNTM+RAY + + L LY M ++ + ++YT+P V++ACA L GK +
Sbjct: 92 SNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEI 151
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD----------------------- 169
H +++ GF SD YVQ L++MYA CG D K+FD
Sbjct: 152 HDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDM 211
Query: 170 -----------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
EM +D+VSW+ +I+ YEQ EEAL++F + G+ D V +VSV
Sbjct: 212 GQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVL 271
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA----RCGNVEKARLVFDMMEK 274
SA L V + +HG I + +QN+++ MY+ +CG VE A VF+ ME+
Sbjct: 272 SACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEE 331
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR-K 333
+ + SWN+++ G NG +L +F EM+N+ PN +T + ++ AC ++G GR
Sbjct: 332 KGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCH 391
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
F I ++ + ++D+ + G L+ AE + + P +V++W L+ H
Sbjct: 392 FASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESM-PMAPDVATWGALLGACKKH 450
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILS 423
G +++E ++PDH F +LS
Sbjct: 451 GDTEMGERVGRKLIE--LQPDHDGFHVLLS 478
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 310/505 (61%), Gaps = 8/505 (1%)
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
MI Y K +L +F + +L DS T +V A QL D + +HG I
Sbjct: 60 MIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMG 119
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
F+ D+ ++V +Y C ++ A +FD M +R+ ++WN+++TGY N + +A+ F
Sbjct: 120 FICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFR 179
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
M +P+ T ++++SAC++LG+ G+ H +I ++ ++++ + A++DMYAKCG
Sbjct: 180 GMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCG 239
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+ E +F +I E+NV +WNVLI+GY M+G G AL+ FS+ML E KPD +TF +
Sbjct: 240 AVYEVEKVFEEIR--EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 422 LSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L AC H GL+ EGR F M + ++P ++HY CMVD+LGRAG L EA ++I+ M + P
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 481 NDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ +W ALL ACR+HG E L +LEP + +VL+SNIY+ +W EVGKLR
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRG 417
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
M +G++K S IE + F ++ P ++ +YK+++++ ++K GY+
Sbjct: 418 MMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDM 477
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
AL+D+E E++EH + YHSEKLA+AFG++N + +++ KNLR+C DCH F+ +S +Y+
Sbjct: 478 ALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYK 537
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R I+VRD NRFHHF G CSC DYW
Sbjct: 538 RYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 165/331 (49%), Gaps = 2/331 (0%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N+MIR Y + + +L +++ M + I +S TFP VLKA A GK++HG +I+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF+ D Y ALV +Y C D ++FDEM R+ V+W +IT Y K +A+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F+ +G T+V V SA LG + + +H + N ++ + +++ MYA+
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG V + VF+ + ++++ +WN +++GY NGQ AL F M + KP+ VT L +
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 319 VSACTYLGSRQLGR-KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+ AC + G GR +F ++ ++D+ + G L+ A + + E
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSM-SIE 356
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ W L+ +HG+ + +++E
Sbjct: 357 PDPIIWRALLCACRVHGNTKLGEYIIKRLIE 387
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 40/321 (12%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ IH + G I ++ ++ Y T + A LF+ + + + WN +I Y
Sbjct: 109 KMIHGIVIQMGFICD-VYTSTALVHLYCTCLSISDASQLFDEMPERNAVT--WNALITGY 165
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+N V+ ++ + M G + T VL AC+ +GK +H I +
Sbjct: 166 THNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNV 225
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V AL+DMYAKCG + KVF+E+ +++ +W V+I+ Y + + AL F + E
Sbjct: 226 FVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLME 285
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
D VT + V A G V + + F+ S+ + +E
Sbjct: 286 NFKPDEVTFLGVLCACCHQGLVTEGRW--------QFM-------SMKQQFGLQPRIEHY 330
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+ D++ + L+ EAL L +Q+ +P+P+ L+ AC
Sbjct: 331 GCMVDLLGRAGLL---------------EEALEL---IQSMSIEPDPIIWRALLCACRVH 372
Query: 326 GSRQLGRKFHGYIINSNMKID 346
G+ +LG YII ++++
Sbjct: 373 GNTKLGE----YIIKRLIELE 389
>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/524 (40%), Positives = 310/524 (59%), Gaps = 42/524 (8%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK-TQQEGLLSDSV 212
MYA+CG+ DD ++F+EM RD+VSW MI+ + A A+ +F++ + D+
Sbjct: 1 MYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAG 60
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
T+ S+ ++G+ AR ++ + VFD M
Sbjct: 61 TMASILPSMGK---------------------------------ARVEDIALLKGVFDEM 87
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
LISWN+ML Y N EA+ LF MQ +P+ VT ++ +C + + LG+
Sbjct: 88 RFTGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGK 147
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ H I M L NA+MDMYA CG L A ++F+ + R+V SW +I+ YG
Sbjct: 148 RIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSM--GTRDVVSWTSIISAYGR 205
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVK 451
HGHGR+A++ F +M +G++PD I F +IL+ACSHAGL+D G+ F MT + + P+++
Sbjct: 206 HGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLE 265
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQL 506
HYACMVD+LGRAGC+ EA+D I MP+ PN+ VWGALL ACRIH G +AA+ L +L
Sbjct: 266 HYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRL 325
Query: 507 EPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRV 566
P+ TGY+VL+SNIYA + +W +V +R M++KG+KK S E G + FH D
Sbjct: 326 APKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDSVHTFHIGDTS 385
Query: 567 NPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLT 626
+P K +YKK+ + I+ GY P++ LHDVE+ED+E L+ HSEKLA+AF ++N
Sbjct: 386 HPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTN 445
Query: 627 PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
P +++T NLR C+DCH A + IS I R+II++D NR H+ +
Sbjct: 446 PGTPIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 489
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
Query: 63 SLFNSIHNDKSYSFL--WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
+L + ++ ++ L WN M+ Y NN VE +EL+ M++ GI ++ T VL +C
Sbjct: 78 ALLKGVFDEMRFTGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSC 137
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
S + GK +H I R S ++ AL+DMYA CG + VFD M RD+VSWT
Sbjct: 138 GEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWT 197
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+I+AY + EA+ LF+K +GL DS+ V++ +A G
Sbjct: 198 SIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAG 242
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L SC +++L ++IH + + + L L ++ Y G AR +F+S+
Sbjct: 133 VLPSCGEVSALSLGKRIHEVIKRRRMCSSML-LENALMDMYANCGCLKEARDVFDSMGTR 191
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
S W ++I AY +GH E ++L+ M G+ +S F +L AC+ L+ GK
Sbjct: 192 DVVS--WTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGK 248
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/505 (39%), Positives = 310/505 (61%), Gaps = 8/505 (1%)
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
MI Y K +L +F + +L DS T +V A QL D + +HG I
Sbjct: 60 MIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMG 119
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
F+ D+ ++V +Y C ++ A +FD M +R+ ++WN+++TGY N + +A+ F
Sbjct: 120 FICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFR 179
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
M +P+ T ++++SAC++LG+ G+ H +I ++ ++++ + A++DMYAKCG
Sbjct: 180 GMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCG 239
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+ E +F +I E+NV +WNVLI+GY M+G G AL+ FS+ML E KPD +TF +
Sbjct: 240 AVYEVEKVFEEIR--EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 422 LSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L AC H GL+ EGR F M + ++P ++HY CMVD+LGRAG L EA ++I+ M + P
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 481 NDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ +W ALL ACR+HG E L +LEP + +VL+SNIY+ +W EVGKLR
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRG 417
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
M +G++K S IE + F ++ P ++ +YK+++++ ++K GY+
Sbjct: 418 MMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDM 477
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
AL+D+E E++EH + YHSEKLA+AFG++N + +++ KNLR+C DCH F+ +S +Y+
Sbjct: 478 ALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYK 537
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R I+VRD NRFHHF G CSC DYW
Sbjct: 538 RYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 165/331 (49%), Gaps = 2/331 (0%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N+MIR Y + + +L +++ M + I +S TFP VLKA A GK++HG +I+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF+ D Y ALV +Y C D ++FDEM R+ V+W +IT Y K +A+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F+ +G T+V V SA LG + + +H + N ++ + +++ MYA+
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG V + VF+ + ++++ +WN +++GY NGQ AL F M + KP+ VT L +
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 319 VSACTYLGSRQLGR-KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+ AC + G GR +F ++ ++D+ + G L+ A + + E
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSM-SIE 356
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ W L+ +HG+ + +++E
Sbjct: 357 PDPIIWRALLCACRVHGNTKLGEYIIKRLIE 387
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 40/321 (12%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ IH + G I ++ ++ Y T + A LF+ + + + WN +I Y
Sbjct: 109 KMIHGIVIQMGFICD-VYTSTALVHLYCTCLSISDASQLFDEMPERNAVT--WNALITGY 165
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+N V+ ++ + M G + T VL AC+ +GK +H I +
Sbjct: 166 THNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNV 225
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V AL+DMYAKCG + KVF+E+ +++ +W V+I+ Y + + AL F + E
Sbjct: 226 FVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLME 285
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
D VT + V A G V + + F+ S+ + +E
Sbjct: 286 NFKPDEVTFLGVLCACCHQGLVTEGRW--------QFM-------SMKQQFGLQPRIEHY 330
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+ D++ + L+ EAL L +Q+ +P+P+ L+ AC
Sbjct: 331 GCMVDLLGRAGLL---------------EEALEL---IQSMSIEPDPIIWRALLCACRVH 372
Query: 326 GSRQLGRKFHGYIINSNMKID 346
G+ +LG YII ++++
Sbjct: 373 GNTKLGE----YIIKRLIELE 389
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/510 (38%), Positives = 314/510 (61%), Gaps = 10/510 (1%)
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYA 237
W +I Y + A L+++ + GL+ D+ T + AV + DV + +H
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
I + F + +QNS++ +YA CG+V A VFD M ++DL++WNS++ G+ +NG+ EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
L+ EM + KP+ T + L+SAC +G+ LG++ H Y+I + + N ++D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHI 416
A+CG ++ A+ +F+++ ++N SW LI G ++G G++A+E F M EG+ P I
Sbjct: 268 ARCGRVEEAKTLFDEM--VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 417 TFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
TF IL ACSH G++ EG + F M + ++P ++H+ CMVD+L RAG + +A++ IK
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 476 MPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ PN +W LL AC +HG E A + QLEP H+G +VL+SN+YA+ +W +V
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDV 445
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
K+R+ M G+KK S++E G + F D+ +P +Y K++ M ++ GY+
Sbjct: 446 QKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 505
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P +S DVE+E++E+ + YHSEK+A+AF +++ + + V KNLRVC DCH A + +
Sbjct: 506 PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLV 565
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S +Y R+I+VRD +RFHHF+ G+CSC DYW
Sbjct: 566 SKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 215/401 (53%), Gaps = 12/401 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP---NTARSLFNSIHNDKSYSFLW 78
+ LRQIH+ G+ LG +I + P + A +F+ I + F+W
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV-FIW 88
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
NT+IR YA G+ + LY MR SG + +++T+PF++KA + + + G+ +H +I
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R+GF S YVQ +L+ +YA CG KVFD+M +DLV+W +I + + KPEEAL
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
L+ + +G+ D TIVS+ SA ++G + + VH Y I +L N ++ +YA
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CKPNPVTAL 316
RCG VE+A+ +FD M ++ +SW S++ G NG EA+ LF M++++ P +T +
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIH 374
++ AC++ G + G ++ + KI+ + + ++D+ A+ G + A +
Sbjct: 329 GILYACSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM- 386
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
P + NV W L+ +HG A Q+L+ ++P+H
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ--LEPNH 425
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/648 (35%), Positives = 372/648 (57%), Gaps = 21/648 (3%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y + + AR +F+ I S+ NT+I AYA+ G C L L++ +R
Sbjct: 81 LINAYAKHSLIHLARQVFDEIPQPDIVSY--NTLIAAYADRGECRPALRLFAEVRELRFG 138
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T V+ AC + ++ + +H ++ G+ + V A++ Y++ G ++ +V
Sbjct: 139 LDGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRV 196
Query: 168 FDEMSV---RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
F EM RD VSW MI A Q + EA+ LF++ + GL D T+ SV +A +
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCV 256
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSM 283
D++ HG I + F + + + ++ +Y++C G + + R VF+ + DL+ WN+M
Sbjct: 257 KDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTM 316
Query: 284 LTGYIQNGQASE-ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
++G+ Q SE + F EMQ++ P+ + + + SAC+ L S +G++ H I S+
Sbjct: 317 ISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSD 376
Query: 343 MKID-ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + ++ NA++ MY+KCG++ A +F+ + E N+ S N +IAGY HG ++L
Sbjct: 377 IPYNRVSVNNALVAMYSKCGNVHDARRVFDTM--PEHNMVSLNSMIAGYAQHGVEVESLR 434
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDML 460
F ML++ + P+ ITF ++LSAC H G ++EG+K F M + ++PE +HY+CM+D+L
Sbjct: 435 LFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLL 494
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFV 515
GRAG L EA +I+ MP P W LL ACR HG + AAN QLEP + +V
Sbjct: 495 GRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYV 554
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
++SN+YA++ +W E ++ M+ +G+KK S IE K + F D +P KE++
Sbjct: 555 MLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHV 614
Query: 576 KVESMAVEIKMAGYMPDLSCAL---HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+ + ++K AGY+PD+ AL +VE +++E L YHSEKLAVAFG+++ +
Sbjct: 615 YMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPIL 674
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLR+C DCH+A + IS I R+I VRD +RFH F+ G CSC DYW
Sbjct: 675 VVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 218/509 (42%), Gaps = 92/509 (18%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC------ 165
TF +LKAC + ++ GK +H ++ +Y+ +Y+KCG +
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70
Query: 166 -------------------------KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
+VFDE+ D+VS+ +I AY + AL LF
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ ++ D T+ V A G DV + +H + + + + N+++A Y+R G
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKG 188
Query: 261 NVEKARLVFDMMEK---RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+ +AR VF M + RD +SWN+M+ Q+ + EA+ LF EM K + T
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC-GDLDTAENMFNDIHPS 376
+++A T + G +FHG +I S ++ + + ++D+Y+KC G + +F +I +
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEI--A 306
Query: 377 ERNVSSWNVLIAGYGMHGH-GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
++ WN +I+G+ + + F +M G PD +F + SACS+ G+
Sbjct: 307 APDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGK 366
Query: 436 KCFADMTKLSVKPEVKHYA-----CMVDMLGRAGCLYEA--------------------- 469
+ A L++K ++ + +V M + G +++A
Sbjct: 367 QVHA----LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAG 422
Query: 470 -------------FDMIKQMPLPPNDSVWGALLLACRIHGEI--AANYL------FQLEP 508
F+++ Q + PN + A+L AC G++ Y F++EP
Sbjct: 423 YAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEP 482
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDM 537
E ++ M ++ + K +E ++ E M
Sbjct: 483 E-AEHYSCMIDLLGRAGKLKEAERIIETM 510
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/688 (33%), Positives = 375/688 (54%), Gaps = 45/688 (6%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFL--WN 79
L +R IH + +G+ +A + ++ Y G + A +F +++ + L +
Sbjct: 264 LEDVRAIHGRIVGAGIEREAF-VRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCS 322
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA------SNSLILEGKVVH 133
MI A NG E+L L+ M G + T VL AC+ + + +LE +
Sbjct: 323 AMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEV 382
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
R D+ + L+ YA+ FD + D+VSW M AY Q +
Sbjct: 383 VSATR-----DNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSR 437
Query: 194 EALILFQKTQQEGLLSDSVTIVS-----------VASAVGQ-LGDVLKAQAVHGYAICNA 241
EAL+LF++ EG+ T ++ ASA+G+ + +L+ + G
Sbjct: 438 EALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEG------ 491
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMME--KRDLISWNSMLTGYIQNGQASEALLL 299
D + N+ + MYA+CG++ AR VF+ + +RD I+WNSML Y +G EA L
Sbjct: 492 ---DTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFEL 548
Query: 300 FDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
F M+ KPN VT + ++ A T S GR+ H ++++ + D ++NA+++MYA
Sbjct: 549 FQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYA 608
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCG LD A+ +F+ ++ +V +W LIAGY +G +AL+ F M ++GV+P+H+TF
Sbjct: 609 KCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTF 668
Query: 419 TSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
S L+AC+H G +++G + + MT + P KH++C+VD+LGR G L EA ++++
Sbjct: 669 ISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS 728
Query: 478 LPPNDSVWGALLLACR-----IHGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ W ALL AC+ GE A + QL+PE +++++++YAA+ +W E
Sbjct: 729 -QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAAT 787
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R+ M +KG++ S +E +++ F D+ +P +E+Y ++E + IK AGY+ D
Sbjct: 788 IRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVAD 847
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
LHDV E +E +L HSEKLA+AFG+M+ + ++V KNLRVC+DCH+A + IS
Sbjct: 848 TGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISK 907
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ R I++RD++R+HHF GTCSC DYW
Sbjct: 908 VTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 251/520 (48%), Gaps = 49/520 (9%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQ---IHSSLTTSGL-INQALHLGAKIIIKYTTYGEPNT 60
PST Y LL++C L +L+Q +H+ + + + ++ L + +I+ + G
Sbjct: 42 APST---YGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAE 98
Query: 61 ARSL---FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
A +L F S+++ MIRA+ +G + +EL+ M + N + ++
Sbjct: 99 AEALADRFASVYS-------CTAMIRAWMEHGRPDKAMELFDRME---VRPNCHALIALV 148
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM---SVR 174
AC+ + G+ +H I F +S + AL+ MY+KCG D + FD + S R
Sbjct: 149 NACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKR 208
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGL-LSDSVTIVSVASAVGQLG--DVLKAQ 231
D+V+W MI+A+ + EAL LF+ ++G +SVT VSV + + G + +
Sbjct: 209 DVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVR 268
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF----DMMEKRDLISWNSMLTGY 287
A+HG + + ++ ++V Y + G+++ A VF D L++ ++M++
Sbjct: 269 AIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISAC 328
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI-- 345
QNG E+L LF M KP+ VT + +++AC+ L Q+G +++ M++
Sbjct: 329 WQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSML---QVGSAT-AFVLEQAMEVVS 384
Query: 346 ---DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
D L ++ YA+ DL A F+ I +V SWN + A Y H R+AL
Sbjct: 385 ATRDNVLGTTLLTTYARSNDLPRARATFDAIQSP--DVVSWNAMAAAYLQHHRSREALVL 442
Query: 403 FSQMLEEGVKPDHITFTSILSACSH-----AGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
F +ML EGV+P TF + L+AC+ A I G++ + + + ++ + +
Sbjct: 443 FERMLLEGVRPSVATFITALTACAAYPPQTASAI--GKRIQSLLEEAGLEGDTAVANATL 500
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG 496
+M + G L +A + +++ D + W ++L A HG
Sbjct: 501 NMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHG 540
>gi|15242278|ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis thaliana]
gi|332004768|gb|AED92151.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/616 (36%), Positives = 346/616 (56%), Gaps = 53/616 (8%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGF--LSDSYVQAALVDMYAKCGQTDDGCKVFDE-- 170
+L+ CA S + GK +H + +G SY+ AL YA G+ K+FDE
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+S +D V WT +++++ + ++ LF + +++ + D V++V + +L D+ A
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNV---------------------------- 262
Q HG A+ L + + N+++ MY +CG V
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 263 ---EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALIL 318
E+ R VF M +R+ ++W M+ GY+ G E L L EM N VT +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKI-------DATLRNAVMDMYAKCGDLDTAENMFN 371
+SAC G+ +GR H Y + M + D + A++DMYAKCG++D++ N+F
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +RNV +WN L +G MHG GR ++ F QM+ E VKPD +TFT++LSACSH+G++
Sbjct: 311 LMR--KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIV 367
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
DEG +CF + ++P+V HYACMVD+LGRAG + EA ++++MP+PPN+ V G+LL +
Sbjct: 368 DEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 492 CRIHG--EIAANY---LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C +HG EIA L Q+ P +T Y +LMSN+Y A + LR ++ +G++K
Sbjct: 428 CSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIP 487
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED--ED 604
S I + F + DR +P KE+Y K+ + I+ AGY+PD+S + E E+
Sbjct: 488 GLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEE 547
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L HSEKLAV FG++ P + V KNLR+C DCHSA + +S +Y R+II+RD N
Sbjct: 548 KEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRN 607
Query: 665 RFHHFEGGTCSCNDYW 680
RFH F+GG+CSC+DYW
Sbjct: 608 RFHQFKGGSCSCSDYW 623
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 225/478 (47%), Gaps = 55/478 (11%)
Query: 15 LLKSC---NFLASLRQIHSSLTTSGLINQAL-HLGAKIIIKYTTYGEPNTARSLFNSIHN 70
LL+ C +FL +++H+ LTTSGL +L + Y + GE TA+ LF+ I
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
+ + W T++ +++ G V +++L+ MRR + + + + CA + +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD--------------------------- 163
HG ++ G L+ V AL+DMY KCG +
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 164 ----GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL-ILFQKTQQEGLLSDSVTIVSVA 218
G +VF EM R+ V+WTVM+ Y A E L +L + + G + VT+ S+
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFL-------EDLCIQNSIVAMYARCGNVEKARLVFDM 271
SA Q G+++ + VH YA+ + +D+ + ++V MYA+CGN++ + VF +
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M KR++++WN++ +G +G+ + +F +M + KP+ +T ++SAC++ G G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEG 370
Query: 332 -RKFHGY-IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
R FH K+D ++D+ + G ++ AE + ++ P N L+
Sbjct: 371 WRCFHSLRFYGLEPKVDHY--ACMVDLLGRAGLIEEAEILMREM-PVPPNEVVLGSLLGS 427
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
+HG A ++++ + P + + ++S + EGR AD + S++
Sbjct: 428 CSVHGKVEIAERIKRELIQ--MSPGNTEYQILMSNM----YVAEGRSDIADGLRGSLR 479
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/655 (34%), Positives = 356/655 (54%), Gaps = 24/655 (3%)
Query: 36 GLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETL 95
GL + +G+ +I G+ +AR +F+ + + +W +I Y E +
Sbjct: 182 GLWGTDIAVGSALIDMLARNGDLASARKVFDGL--IEKTVVVWTLLISRYVQGECAEEAV 239
Query: 96 ELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
E++ G + YT ++ AC + G +H +R GF SD+ V LVDMY
Sbjct: 240 EIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMY 299
Query: 156 AKCG---QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE-EALILFQKTQQEGLLSDS 211
AK D KVF+ M D++SWT +I+ Y Q+ E + ++LF + E + +
Sbjct: 300 AKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNH 359
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
+T S+ A + D + VH + I + + N++V+MYA G +E+AR VF+
Sbjct: 360 ITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQ 419
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ +R +IS I G+ + L + D + T L+SA +G G
Sbjct: 420 LYERSMISC-------ITEGRDAP---LDHRIGRMDMGISSSTFASLISAAASVGMLTKG 469
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ H + + D + N+++ MY++CG L+ A FN++ +RNV SW +I+G
Sbjct: 470 QQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNEL--KDRNVISWTSMISGLA 527
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEV 450
HG+ +AL F M+ GVKP+ +T+ ++LSACSH GL+ EG++ F M + + P +
Sbjct: 528 KHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRM 587
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
+HYACMVD+L R+G + EA + I +MPL + VW LL ACR H GEIAA + +
Sbjct: 588 EHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIE 647
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
LEP +VL+SN+YA + W EV ++R M++ L K S +E F D
Sbjct: 648 LEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDT 707
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P +++Y K++++ EIK GY+PD S LHD+ DE +E L HSEK+AVAFG++
Sbjct: 708 SHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITT 767
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +++ KNLRVC DCHSA +++S RR+II+RD+NRFH + G CSC +YW
Sbjct: 768 SAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 243/520 (46%), Gaps = 41/520 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H L L+++ + ++ Y+ G +AR++F+ + + W M
Sbjct: 68 RALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDI-VSWTAMASCL 126
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL--S 143
A NG E+L L M SG+ N+YT V AC + L V ++ L +
Sbjct: 127 ARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGT 186
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D V +AL+DM A+ G KVFD + + +V WT++I+ Y Q E EEA+ +F
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
++G D T+ S+ SA +LG V +H A+ F D C+ +V MYA+ N+E
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK-SNIE 305
Query: 264 K----ARLVFDMMEKRDLISWNSMLTGYIQNG-QASEALLLFDEMQNSDCKPNPVTALIL 318
+ A VF+ M K D+ISW ++++GY+Q+G Q ++ ++LF EM N KPN +T +
Sbjct: 306 QAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSI 365
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH---- 374
+ AC + GR+ H ++I SN T+ NA++ MYA+ G ++ A +FN ++
Sbjct: 366 LKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSM 425
Query: 375 ----------PSERNV---------SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
P + + S++ LI+ G K + + L+ G D
Sbjct: 426 ISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDR 485
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
S++S S G +++ + F ++ +V + M+ L + G A +
Sbjct: 486 FVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS----WTSMISGLAKHGYAERALSLFHD 541
Query: 476 MPL---PPNDSVWGALLLACRIHGEI--AANYLFQLEPEH 510
M L PND + A+L AC G + Y ++ +H
Sbjct: 542 MILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDH 581
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 186/355 (52%), Gaps = 8/355 (2%)
Query: 129 GKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAY 186
G+ +H ++R L D+ V +L+ +Y++CG VFD M +RD+VSWT M +
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV--GQLGDVLKAQAVHGYAICNAFLE 244
+ E+L+L + + GLL ++ T+ +VA A +L ++ + +
Sbjct: 127 ARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGT 186
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D+ + ++++ M AR G++ AR VFD + ++ ++ W +++ Y+Q A EA+ +F +
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+P+ T ++SACT LGS +LG + H + DA + ++DMYAK +++
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK-SNIE 305
Query: 365 TAENMFNDIHPSER--NVSSWNVLIAGYGMHG-HGRKALEFFSQMLEEGVKPDHITFTSI 421
A + N + R +V SW LI+GY G K + F +ML E +KP+HIT++SI
Sbjct: 306 QAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSI 365
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
L AC++ D GR+ A + K + +V M +GC+ EA + Q+
Sbjct: 366 LKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQL 420
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)
Query: 225 GDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEK-RDLISWNS 282
GD+ +A+H + L+ D + NS++ +Y+RCG V AR VFD M RD++SW +
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M + +NG E+LLL EM S PN T + AC + +
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC-FPHELYCLVGGVVLGLVHK 180
Query: 343 MKI---DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
M + D + +A++DM A+ GDL +A +F+ + E+ V W +LI+ Y +A
Sbjct: 181 MGLWGTDIAVGSALIDMLARNGDLASARKVFDGL--IEKTVVVWTLLISRYVQGECAEEA 238
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
+E F LE+G +PD T +S++SAC+ G + G + + ++ + +VDM
Sbjct: 239 VEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDM 298
Query: 460 LGRAGCLYEAFDMIKQM--PLPPNDSV-WGALL 489
++ + +A D ++ + ND + W AL+
Sbjct: 299 YAKSN-IEQAMDYANKVFERMRKNDVISWTALI 330
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 333/603 (55%), Gaps = 41/603 (6%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
LK C + L K +H I+++G + L+D Y KC D +FDEM RD
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 177 VSWTVMITAYEQAEKPEEALILFQKT-QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
VSW ++TAY QA+ P + L +F + L D ++ A L + + VH
Sbjct: 69 VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHA 128
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + F++D +++S+V MYA+CG AR VFD + + +SW +ML+GY ++G E
Sbjct: 129 RFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDE 188
Query: 296 ALLLFDE----------------MQNSDCKP----------------NPVTALILVSACT 323
A+ LF +Q+ C +P+ +V AC
Sbjct: 189 AMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACA 248
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L LG++ HG +I S + + NA++DMYAKC D+ A N+FN + R+V SW
Sbjct: 249 NLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRM--LHRDVVSW 306
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
+I G HG ++AL+ + QM+ +KP+ +TF ++ ACSHAGL+ +GRK F M +
Sbjct: 307 TSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIE 366
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA--- 499
+ P ++ + C +D+L R+G L EA D+IK MP P++ W ALL AC+ HG
Sbjct: 367 DYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGV 426
Query: 500 --ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
A+ L L +VL+SN+YA + KW ++ ++R+ M + +K+ +S I+ GK+
Sbjct: 427 RIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKES 486
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
Q FH + +P E++ ++ + E++ GY+PD S LHD+E++++E L +HSE+ A
Sbjct: 487 QVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWA 546
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VA+G++ P V+++ KNLR+C DCH+ + S I ++IIVRDA R+HHF+ G CSCN
Sbjct: 547 VAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCN 606
Query: 678 DYW 680
D+W
Sbjct: 607 DFW 609
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 241/497 (48%), Gaps = 46/497 (9%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++IH+ + SGL NQ L ++ Y A LF+ + S W +++ AY
Sbjct: 22 KKIHAQIVKSGL-NQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVS--WASILTAY 78
Query: 86 ANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+TL ++ M + + + + + +LKACAS + GK VH + + F+ D
Sbjct: 79 NQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDD 138
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT-- 202
V+++LVDMYAKCG VFD + V+ VSWT M++ Y ++ +EA+ LF +T
Sbjct: 139 DVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPV 198
Query: 203 -----------------------------QQEGL-LSDSVTIVSVASAVGQLGDVLKAQA 232
++EG+ + D + + SV A L + +
Sbjct: 199 RNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQ 258
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
+HG I + + L I N++V MYA+C ++ AR VF+ M RD++SW S++ G Q+G+
Sbjct: 259 IHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGR 318
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRN 351
A EAL L+D+M ++ KPN VT + L+ AC++ G GRK F I + + L
Sbjct: 319 AKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFT 378
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
+D+ ++ G L+ AE++ + P + + +W L++ HG+ + ++L +
Sbjct: 379 CFLDLLSRSGHLNEAEDLIKTM-PHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNM 437
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+ T+ + + + AG ++ + MT + VK + + + +D LG+ ++ A +
Sbjct: 438 H-EPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSS--ID-LGKESQVFHAGE 493
Query: 472 MIKQMPLPPNDSVWGAL 488
P D ++G L
Sbjct: 494 TCH----PMKDEIFGLL 506
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 155/341 (45%), Gaps = 47/341 (13%)
Query: 3 RLGPSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
RL P Y LLK+C L SLR Q+H+ S ++ + + + ++ Y G P+
Sbjct: 99 RLQPD-HFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDV-VKSSLVDMYAKCGLPS 156
Query: 60 TARSLFNSIHNDKSYS-----------------------------FLWNTMIRAYANNGH 90
ARS+F+SI S S + W +I +G+
Sbjct: 157 IARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGY 216
Query: 91 CVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA 149
C++ ++ MRR G+ + V+ ACA+ +++ GK +HG +I +G+ S ++
Sbjct: 217 CIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISN 276
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
ALVDMYAKC VF+ M RD+VSWT +I Q + +EAL L+ + +
Sbjct: 277 ALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKP 336
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI------VAMYARCGNVE 263
+ VT V + A G V K G + A +ED I S+ + + +R G++
Sbjct: 337 NEVTFVGLIYACSHAGLVSK-----GRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLN 391
Query: 264 KAR-LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+A L+ M K D +W ++L+ +G + + D +
Sbjct: 392 EAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRL 432
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/592 (35%), Positives = 341/592 (57%), Gaps = 13/592 (2%)
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
+ + +M R G+ ++S T+ ++K C ++ + EGK VH I G+ +++ L++M
Sbjct: 270 MHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINM 329
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
Y K ++ +FD+M R++VSWT MI+AY A+ + A+ L ++G++ + T
Sbjct: 330 YVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTF 389
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK 274
SV A +L D+ + +H + + D+ ++++++ +Y++ G + +A VF M
Sbjct: 390 SSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMT 446
Query: 275 RDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
D + WNS++ + Q+ EAL L+ M+ + T ++ ACT L +LGR+
Sbjct: 447 GDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQA 506
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
H +++ + D L NA++DMY KCG L+ A+ +FN + ++++V SW+ +IAG +G
Sbjct: 507 HVHVLKFDQ--DLILNNALLDMYCKCGSLEDAKFIFNRM--AKKDVISWSTMIAGLAQNG 562
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHY 453
+AL F M +G KP+HIT +L ACSHAGL++EG F M L + P +HY
Sbjct: 563 FSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHY 622
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEP 508
CM+D+LGRA L + +I +M P+ W LL ACR + AA + +L+P
Sbjct: 623 GCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDP 682
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
+ TG +VL+SNIYA S +W +V ++R MK +G++K S IE K I F D+ +P
Sbjct: 683 QDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHP 742
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
E+ +++ + AGY+PD + L D+E E RE L YHSEKLA+ FGIM+ E
Sbjct: 743 QIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKE 802
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNL++C DCH + I+ + +R I++RD R+HHF+ G CSC DYW
Sbjct: 803 KTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 203/381 (53%), Gaps = 15/381 (3%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+K C ++R+ +H + ++G + L +I Y + A+ LF+ +
Sbjct: 288 YSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTF-LTNILINMYVKFNLLEEAQVLFDKM 346
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W TMI AY+N + L + M R G+ N +TF VL+AC + +
Sbjct: 347 PERNVVS--WTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACER---LYD 401
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
K +H I++ G SD +V++AL+D+Y+K G+ + KVF EM D V W +I A+ Q
Sbjct: 402 LKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQ 461
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+EAL L++ ++ G +D T+ SV A L + + H + + F +DL +
Sbjct: 462 HSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL--KFDQDLIL 519
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
N+++ MY +CG++E A+ +F+ M K+D+ISW++M+ G QNG + EAL LF+ M+
Sbjct: 520 NNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGP 579
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTA 366
KPN +T L ++ AC++ G G ++ +N+ ID + ++D+ + LD
Sbjct: 580 KPNHITILGVLFACSHAGLVNEGW-YYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDM 638
Query: 367 ENMFNDIHPSERNVSSWNVLI 387
+ ++++ E +V +W L+
Sbjct: 639 VKLIHEMN-CEPDVVTWRTLL 658
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/675 (35%), Positives = 370/675 (54%), Gaps = 33/675 (4%)
Query: 27 QIHSSLTTSGLINQALHLGAK--IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
Q+H L SG L+L +I Y EP A +F+S+ S W+ ++
Sbjct: 27 QVHCYLLKSG---SGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVS--WSALMSG 81
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ NG +L L+S M R GI N +TF LKAC + + +G +HG ++ GF
Sbjct: 82 HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
V +LVDMY+KCG+ ++ KVF + R L+SW MI + A +AL F Q+
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201
Query: 205 EGL--LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF--LEDLCIQNSIVAMYARCG 260
+ D T+ S+ A G + + +HG+ + + F I S+V +Y +CG
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ--NSDCKPNPVTALIL 318
+ AR FD ++++ +ISW+S++ GY Q G+ EA+ LF +Q NS ++++I
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
V A + RQ G++ + ++ ++ N+V+DMY KCG +D AE F ++ +
Sbjct: 322 VFA-DFALLRQ-GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL--K 377
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V SW V+I GYG HG G+K++ F +ML ++PD + + ++LSACSH+G+I EG + F
Sbjct: 378 DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Query: 439 ADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ + + +KP V+HYAC+VD+LGRAG L EA +I MP+ PN +W LL CR+HG+
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Query: 498 I-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
I L +++ ++ +V+MSN+Y + W E G RE KGLKK A S +E
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Query: 553 YGKDIQGFHTADR---VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
+++ F + + + P +E K+ E E GY+ L LHD++DE +E L
Sbjct: 558 IEREVHFFRSGEDSHPLTPVIQETLKEAERRLRE--ELGYVYGLKHELHDIDDESKEENL 615
Query: 610 NYHSEKLAV----AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
HSEKLA+ A G +N + ++V KNLRVC DCH + +S I + +VRDA R
Sbjct: 616 RAHSEKLAIGLALATGGLNQKGKT-IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVR 674
Query: 666 FHHFEGGTCSCNDYW 680
FH FE G CSC DYW
Sbjct: 675 FHSFEDGCCSCGDYW 689
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 205/414 (49%), Gaps = 14/414 (3%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L+ C L +G VH ++++G + L+DMY KC + KVFD M R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSW+ +++ + + +L LF + ++G+ + T + A G L + K +HG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + F + + NS+V MY++CG + +A VF + R LISWN+M+ G++ G S+
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 296 ALLLFDEMQNSDCK--PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI--DATLRN 351
AL F MQ ++ K P+ T L+ AC+ G G++ HG+++ S AT+
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
+++D+Y KCG L +A F+ I E+ + SW+ LI GY G +A+ F ++ E
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQI--KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+ D +SI+ + L+ +G++ A KL E +VDM + G + EA
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Query: 472 MIKQMPLPPNDSVWGALLLACRIH--GEIAANYLFQL-----EPEHTGYFVLMS 518
+M L S W ++ H G+ + +++ EP+ Y ++S
Sbjct: 370 CFAEMQLKDVIS-WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 155/300 (51%), Gaps = 14/300 (4%)
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
+VS+ + G + VH Y + + +L N ++ MY +C A VFD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
+R+++SW+++++G++ NG +L LF EM PN T + AC L + + G +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
HG+ + ++ + N+++DMY+KCG ++ AE +F I +R++ SWN +IAG+
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI--VDRSLISWNAMIAGFVHA 186
Query: 394 GHGRKALEFFSQMLEEGVK--PDHITFTSILSACSHAGLIDEGRKC--FADMTKLSVKPE 449
G+G KAL+ F M E +K PD T TS+L ACS G+I G++ F +
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 450 VKHYACMVDMLGRAGCLY---EAFDMIKQMPLPPNDSVWGALLLACRIHGE-IAANYLFQ 505
+VD+ + G L+ +AFD IK+ + W +L+L GE + A LF+
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS----WSSLILGYAQEGEFVEAMGLFK 302
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/656 (34%), Positives = 354/656 (53%), Gaps = 18/656 (2%)
Query: 35 SGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVET 94
+G + +G +I + G+ AR +FN + + +W MI Y G +
Sbjct: 176 TGFWGTDVSVGCALIDMFARNGDLVAARKVFNGL--VERTVVVWTLMITRYVQGGCAGKA 233
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
+EL+ M G + YT ++ ACA G+ +H ++R G +SD+ V LVDM
Sbjct: 234 VELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDM 293
Query: 155 YAKCGQTDD---GCKVFDEMSVRDLVSWTVMITAYEQAEKPEE-ALILFQKTQQEGLLSD 210
Y K KVF M +++SWT +I+ Y Q E A+ L + E + +
Sbjct: 294 YTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPN 353
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
+T S+ A L D + +H + + + N++V+MYA G +E+AR FD
Sbjct: 354 HLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFD 413
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
+ +R+L+S +S + G AS + ++++ D + T L+SA +G
Sbjct: 414 QLYERNLLSTSSDI-GETGRSNASWS----SQIESMDVGVSTFTFASLLSAAATVGLPTK 468
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G++ H I + + D + N+++ MY++CG LD A F+++ + NV SW +I+
Sbjct: 469 GQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEME-DDHNVISWTSIISAL 527
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPE 449
HGH +AL F M+ GVKP+ +T+ ++LSACSH GL+ EG++ F M K + P
Sbjct: 528 AKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPR 587
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLF 504
++HYACMVD+L R+G + EA + I +MP + VW LL ACR + GEIAA ++
Sbjct: 588 MEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVI 647
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
LEP+ +VL+SN+YA W EV ++R M+++ L K S + G I F D
Sbjct: 648 DLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGD 707
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
+P +E+Y K+ + EIK GY+PD S LHD+ D+ +E L HSEK+AVAFG++
Sbjct: 708 TSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLIT 767
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P +++ KNLRVC DCHSA ++IS R+II+RD+NRFH + G CSC +YW
Sbjct: 768 TLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 222/477 (46%), Gaps = 14/477 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H L + +++ + ++ Y+ G AR +F+ + + W M
Sbjct: 63 RALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDL-VSWTAMAFCL 121
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL-EGKVVHGDIIRTGFL-S 143
NG E L L M SG+ N++T AC L G V G I+TGF +
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGT 181
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D V AL+DM+A+ G KVF+ + R +V WT+MIT Y Q +A+ LF
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGML 241
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC---G 260
++G D T+ S+ SA + G Q +H + + D C+ +V MY +
Sbjct: 242 EDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQ 301
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQ-NGQASEALLLFDEMQNSDCKPNPVTALILV 319
++E AR VF M +++SW ++++GY+Q GQ + A+ L EM N +PN +T L+
Sbjct: 302 SMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLL 361
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC L + GR+ H ++ +++ + NA++ MYA+ G ++ A F+ ++ ERN
Sbjct: 362 KACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLY--ERN 419
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
+ S + I GR + SQ+ V TF S+LSA + GL +G++ A
Sbjct: 420 LLSTSSDIGET-----GRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHA 474
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
K + + +V M R G L +A +M N W +++ A HG
Sbjct: 475 LSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHG 531
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 190/357 (53%), Gaps = 12/357 (3%)
Query: 129 GKVVHGDIIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAY 186
G+ +H ++ T L +D+ V +L+ MY+KCG +VFD M +RDLVSWT M
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA--VHGYAICNAFL- 243
+ +EAL+L + + GL ++ T+ + A A G++ ++ V G+AI F
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFP-GELFRSSGGTVLGFAIKTGFWG 180
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
D+ + +++ M+AR G++ AR VF+ + +R ++ W M+T Y+Q G A +A+ LF M
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC--- 360
+P+ T +VSAC GS LG++ H ++ + D + ++DMY K
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGY-GMHGHGRKALEFFSQMLEEGVKPDHITFT 419
++ A +F + P+ NV SW LI+GY G A+E +ML E ++P+H+T++
Sbjct: 301 QSMECARKVFKRM-PTH-NVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYS 358
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
S+L AC++ D GR+ A + K S+ +V M +GC+ EA Q+
Sbjct: 359 SLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQL 415
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 149/304 (49%), Gaps = 20/304 (6%)
Query: 230 AQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEK-RDLISWNSMLTGY 287
+A+H + L+ D + NS++ MY++CG+V AR VFD M RDL+SW +M
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS--RQLGRKFHGYIINSNM-K 344
+NG EAL+L EM S +PN T AC + G R G G+ I +
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC-FPGELFRSSGGTVLGFAIKTGFWG 180
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
D ++ A++DM+A+ GDL A +FN + ER V W ++I Y G KA+E F
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGL--VERTVVVWTLMITRYVQGGCAGKAVELFL 238
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM---LG 461
MLE+G +PD T +S++SAC+ G G++ + + +L + + +VDM L
Sbjct: 239 GMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQ 298
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALL---LACRIHGEIAANYLFQL-----EPEHTGY 513
+ A + K+MP N W AL+ + C A L ++ EP H Y
Sbjct: 299 MEQSMECARKVFKRMP-THNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTY 357
Query: 514 FVLM 517
L+
Sbjct: 358 SSLL 361
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/683 (35%), Positives = 373/683 (54%), Gaps = 27/683 (3%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
T F ++ + CN L S R + + + + + L K+I YT A +LF+
Sbjct: 32 TVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDE 91
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLI 126
+ S WN+MI G ++L+ M RS +S + N
Sbjct: 92 MPVRDVVS--WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMV----------NGCF 139
Query: 127 LEGKVVHGD-IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
GKV + + + D+ ++V Y + G+ DD K+F +M ++++SWT MI
Sbjct: 140 RSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG 199
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+Q E+ EAL LF+ + + S S V +A VHG I FL +
Sbjct: 200 LDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE 259
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ S++ YA C + +R VFD + W ++L+GY N + +AL +F M
Sbjct: 260 EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR 319
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+ PN T +++C+ LG+ G++ HG + ++ DA + N+++ MY+ G+++
Sbjct: 320 NSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVND 379
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A ++F I ++++ SWN +I G HG G+ A F QM+ +PD ITFT +LSAC
Sbjct: 380 AVSVFIKIF--KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSAC 437
Query: 426 SHAGLIDEGRKCFADMTKL--SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
SH G +++GRK F M+ + +++HY CMVD+LGR G L EA ++I++M + PN+
Sbjct: 438 SHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEM 497
Query: 484 VWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
VW ALL ACR+H GE AA +F L+ + + +VL+SNIYA++ +W V KLR MK
Sbjct: 498 VWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMK 557
Query: 539 NKG-LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
G +KKP + V+ GK + F + D+ P+ +Y+K+E + ++K GY PD AL
Sbjct: 558 KNGIMKKPGSSWVVIRGKKHE-FFSGDQ--PHCSRIYEKLEFLREKLKELGYAPDYRSAL 614
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
HDVEDE +E ML YHSE+LA+AFG++N + V V KNLRVC DCH+ + IS + R+
Sbjct: 615 HDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGRE 674
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I++RD RFHHF+ GTCSC DYW
Sbjct: 675 IVLRDPIRFHHFKNGTCSCGDYW 697
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 306/515 (59%), Gaps = 11/515 (2%)
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQ-QEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
D + +I AY Q + LF +T + G+ + T V +G + + V
Sbjct: 88 DAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCV 147
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGN--VEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
HG + F ED+ + N+++ MY G E A VFD K D ++W++M+ G+++ G
Sbjct: 148 HGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLG 207
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+S A+ LF EMQ P+ +T + ++SAC LG+ +LG+ Y+ N+ L N
Sbjct: 208 CSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCN 267
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
A++DM+AKCG++D A +F + R + SW +IAG MHG G A+ F +M+E G+
Sbjct: 268 ALIDMFAKCGNVDKAIKLFRQM--DSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGI 325
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAF 470
PD + F +LSACSH+GL+D+GR F M + S+ P+V+HY CMVD+L R G + EAF
Sbjct: 326 TPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAF 385
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASN 525
+ +++MP PN +W ++ AC GE+ + L + EP H +VL+SNIYA
Sbjct: 386 EFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLR 445
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
+W + K+RE M +G+KK ++IE ++ F D+ + +KE+Y+ V+ M EIK
Sbjct: 446 QWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIK 505
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
AGY+P S L D+++ED+E L HSEKLA+AF ++N P +++ KNLRVC DCHS
Sbjct: 506 KAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHS 565
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
A +FIS +Y R+I+VRD NRFHHF+ G CSC D+W
Sbjct: 566 ATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 218/458 (47%), Gaps = 70/458 (15%)
Query: 8 TEGFYDQLLKS-CNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
TE LL S CN L+ L QIH+ + +GL N L I+ K+T+ S N
Sbjct: 16 TEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPL-----ILTKFTS------TSSNLN 64
Query: 67 SIHNDKSY----------------SFLWNTMIRAYANNGHC-VETLELYSTMRRSGISSN 109
SIH S+ +FL+NT+IRAY+ + Y TM R G++ N
Sbjct: 65 SIHYATSFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPN 124
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC---- 165
+TFPFVLK CA + GK VHG +++ GF D +V L+ MY C +DG
Sbjct: 125 KFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMY--CCLGEDGFEFAE 182
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
KVFD+ D V+W+ MI + + A+ LF++ Q G+ D +T+VSV SA LG
Sbjct: 183 KVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLG 242
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + V Y + + + N+++ M+A+CGNV+KA +F M+ R ++SW S++
Sbjct: 243 ALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIA 302
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
G +G+ +A+ LFDEM + P+ V + ++SAC++ G GR + G
Sbjct: 303 GLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFG--------- 353
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ E F+ + E ++L G G ++A EF +
Sbjct: 354 -------------------SMERNFSIVPKVEHYGCMVDLLCRG----GFVKEAFEFVQK 390
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
M E P+ I + +I++AC G + G ++ K
Sbjct: 391 MPFE---PNQIIWRTIITACHATGELKLGESISKELIK 425
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/616 (35%), Positives = 337/616 (54%), Gaps = 46/616 (7%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD--- 162
+ N Y L+ C+ E K +H +++TG + DSY + +D
Sbjct: 10 LEHNLYETMSCLQRCSKQE---ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
VFD D W +MI + +++PE +L+L+Q+ ++ T S+ A
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
L + +H + D+ NS++ YA GN + A L+FD + + D +SWNS
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 283 -------------------------------MLTGYIQNGQASEALLLFDEMQNSDCKPN 311
M++GY+Q EAL LF EMQNSD +P+
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V+ +SAC LG+ + G+ H Y+ + +++D+ L ++DMYAKCG+++ A +F
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+I +++V +W LI+GY HGHGR+A+ F +M + G+KP+ ITFT++L+ACS+ GL+
Sbjct: 307 NI--KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG+ F M + ++KP ++HY C+VD+LGRAG L EA I++MPL PN +WGALL
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRIH GE L ++P H G +V +NI+A KW + + R MK +G+ K
Sbjct: 425 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 484
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD-VEDED 604
S I F DR +P +++ K M +++ GY+P+L L D V+D++
Sbjct: 485 PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDE 544
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
RE +++ HSEKLA+ +G++ P ++++ KNLRVC DCH + IS IY+R I++RD
Sbjct: 545 REAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRT 604
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 605 RFHHFRDGKCSCGDYW 620
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 205/417 (49%), Gaps = 47/417 (11%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-------ARSLFNSI 68
L+ C+ L+QIH+ + +GL+ + I K+ ++ +T A+ +F+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSY-----AITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
D+ +FLWN MIR ++ + +L LY M S N+YTFP +LKAC++ S E
Sbjct: 76 --DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYA-------------------------------K 157
+H I + G+ +D Y +L++ YA K
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 193
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
G+ D +F +M+ ++ +SWT MI+ Y QA+ +EAL LF + Q + D+V++ +
Sbjct: 194 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 253
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
SA QLG + + + +H Y D + ++ MYA+CG +E+A VF ++K+ +
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHG 336
+W ++++GY +G EA+ F EMQ KPN +T +++AC+Y G + G+ F+
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+ N+K ++D+ + G LD A+ ++ P + N W L+ +H
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM-PLKPNAVIWGALLKACRIH 429
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/638 (34%), Positives = 360/638 (56%), Gaps = 18/638 (2%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G A+S+FN + S WNT++ N +E L+L+ R +
Sbjct: 246 YAKCGLVEDAKSVFNWMETRDMVS--WNTLMAGLQLNECELEALQLFHESRATMGKMTQS 303
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T+ V+K CA+ + + +H +++ GF V AL D Y+KCG+ D +F
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363
Query: 172 S-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+ R++VSWT +I+ Q A++LF + +++ ++ + T ++ A +L
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL---SILPP 420
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
Q +H I + + +++A Y++ G+ E A +F M+E++D+++W++ML+ + Q
Sbjct: 421 Q-IHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQA 479
Query: 291 GQASEALLLFDEMQNSDCKPN--PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
G A LF++M KPN ++++I AC G Q GR+FH I
Sbjct: 480 GDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQ-GRQFHAISIKYRYHDAIC 538
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ +A++ MY++ G++D+A+ +F ++R++ SWN +I+GY HG+ KA+E F QM
Sbjct: 539 VSSALVSMYSRKGNIDSAQIVFE--RQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEA 596
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLY 467
G++ D +TF +++ C+H GL+ EG++ F M + + P ++HYACMVD+ RAG L
Sbjct: 597 SGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLD 656
Query: 468 EAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYA 522
E +I+ MP P VW LL ACR+H G+ +A+ L LEP + +VL+SNIYA
Sbjct: 657 ETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYA 716
Query: 523 ASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAV 582
A+ KW+E ++R+ M + +KK A S I+ + F D+ +P ++YKK++ +
Sbjct: 717 AAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIIT 776
Query: 583 EIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCND 642
+K GY P+ S LHD+ ++ +E ML HSE+LA+AFG++ P +Q+ KNLRVC D
Sbjct: 777 RLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGD 836
Query: 643 CHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
CH + +S I R+II+RD +RFHHF GG CSC D+W
Sbjct: 837 CHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 184/347 (53%), Gaps = 2/347 (0%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N ++ YA G E L+ +S RR G+ +S T VLKAC S + G+ +H ++
Sbjct: 68 NRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127
Query: 139 TGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
G + +LVDMY KCG +G +VF+ M +++V+WT ++T A+ E +
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF + + EG+ + T SV SAV G + Q VH ++ + + NS++ MYA
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG VE A+ VF+ ME RD++SWN+++ G N EAL LF E + + K T
Sbjct: 248 KCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ C L L R+ H ++ + + A+ D Y+KCG+L A N+F+ +
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFS-MTTGS 366
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
RNV SW +I+G +G A+ FS+M E+ V P+ T++++L A
Sbjct: 367 RNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 217/457 (47%), Gaps = 17/457 (3%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C + Q+H G + G ++ Y G +F +
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM--P 162
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
K W +++ A+ E + L+ MR GI N +TF VL A AS + G+
Sbjct: 163 KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQR 222
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH ++ G S +V +L++MYAKCG +D VF+ M RD+VSW ++ + E
Sbjct: 223 VHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNEC 282
Query: 192 PEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EAL LF +++ G ++ S T +V L + A+ +H + + F +
Sbjct: 283 ELEALQLFHESRATMGKMTQS-TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMT 341
Query: 251 SIVAMYARCGNVEKARLVFDMME-KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
++ Y++CG + A +F M R+++SW ++++G IQNG A++LF M+
Sbjct: 342 ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVM 401
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN T ++ A + L + H +I +N + ++ A++ Y+K G + A ++
Sbjct: 402 PNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSI 457
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS--H 427
F I +++V +W+ +++ + G A F++M +G+KP+ T +S++ AC+
Sbjct: 458 FKMIE--QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPS 515
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
AG +D+GR+ A K + + +V M R G
Sbjct: 516 AG-VDQGRQFHAISIKYRYHDAICVSSALVSMYSRKG 551
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 265 ARLVFDMMEKRDL-ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
AR D + +RD + N +L Y + G E L F + + T ++ AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 324 YLGSRQLGRKFHGYIINSNM-KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ R LG + H + + + + +++DMY KCG + +F + ++NV +
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM--PKKNVVT 168
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W L+ G + + F +M EG+ P+ TF S+LSA + G +D G++ A
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG-EIAA 500
K + V +++M + G + +A + M D V W L+ +++ E+ A
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM--ETRDMVSWNTLMAGLQLNECELEA 286
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
LF G + + YA V KL ++K L + V+++ GF
Sbjct: 287 LQLFHESRATMGK--MTQSTYAT------VIKLCANLKQLALARQLHSCVLKH-----GF 333
Query: 561 HTADRVNPYWKEVYKKVESMA 581
H V + Y K +A
Sbjct: 334 HLTGNVMTALADAYSKCGELA 354
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/464 (41%), Positives = 299/464 (64%), Gaps = 10/464 (2%)
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL--ISWNS 282
G+ +A H + F D+ +Q ++ YA+ G VE+AR +FD M +R+ ++WN+
Sbjct: 44 GEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNT 103
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M++ Y+Q G+ A+ +F +MQ+ + KP VT + L+SAC +LG+ +G HGYI
Sbjct: 104 MISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKR 163
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+KID L NA++DMY KCG L+ A ++F+ + S +N+ WN +I G GM+G G +A+
Sbjct: 164 LKIDVVLGNALIDMYCKCGALEAAIDVFHGL--SRKNIFCWNSIIVGLGMNGRGEEAIAA 221
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLG 461
F M +EG+KPD +TF ILS CSH+GL+ G++ F++M + ++P V+HY CMVD+LG
Sbjct: 222 FIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLG 281
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA ++I+ MP+ PN V G+LL AC+IH GE L +L+P G +V
Sbjct: 282 RAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVF 341
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
+SN+YA+ ++W +V R+ M +G+ K S IE + F D +P + ++
Sbjct: 342 LSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAF 401
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
++ +A E+K G++P+ + LHD+E+E++E + YHSE++AVAFG+M+ P ++V KN
Sbjct: 402 LDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKN 461
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LR C+DCHSA + IS ++R+IIVRD RFHHF G+CSCNDYW
Sbjct: 462 LRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 505
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 1/214 (0%)
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ +++G + L + M +D P+ + +++ +C G QLG FH I+
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ D L+ ++D YAK G ++ A N+F+++ N +WN +I+ Y G A+
Sbjct: 61 FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
F QM E VKP +T S+LSAC+H G +D G + +K +V ++DM +
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCK 180
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
G L A D+ + N W ++++ ++G
Sbjct: 181 CGALEAAIDVFHGLS-RKNIFCWNSIIVGLGMNG 213
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y +G AR+LF+++ S S WNTMI AY G + ++ M+ +
Sbjct: 75 YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEV 134
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T +L ACA + G+ +HG I D + AL+DMY KCG + VF +
Sbjct: 135 TMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGL 194
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
S +++ W +I + EEA+ F ++EG+ D VT V + S G + Q
Sbjct: 195 SRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQ 254
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Query: 8 TEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
TE LL +C L +L IH + T L + LG +I Y G A +
Sbjct: 132 TEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVV-LGNALIDMYCKCGALEAAIDV 190
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + + F WN++I NG E + + M + GI + TF +L C+ +
Sbjct: 191 FHGL--SRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSG 248
Query: 125 LILEGKVVHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
L+ G+ +++ G +VD+ + G + ++ M ++
Sbjct: 249 LLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMK 299
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/532 (40%), Positives = 321/532 (60%), Gaps = 65/532 (12%)
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D V++V+V A +G L +AVHG A+ + EDL + N++V MYA+CG V++A VF
Sbjct: 12 DVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVF 71
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-------------------------- 303
D ++++D++SWN+M+ GY Q G+ +AL LF++M
Sbjct: 72 DRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGC 131
Query: 304 --------------------------QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
Q+ KPN T + AC L + +LGR+ H Y
Sbjct: 132 ETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAY 191
Query: 338 IINSNMKIDAT---LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
I+ ++ D+ + N ++DMYAK GD+D A +F+++ ++N SW L+ GYGMHG
Sbjct: 192 ILRNHF--DSAFLYVANCLIDMYAKSGDIDVARFVFDNL--KQKNFVSWTSLMTGYGMHG 247
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHY 453
G++ALE F +M G++PD +T +L ACSH+G+ID+G + F M+K V P +HY
Sbjct: 248 RGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHY 307
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEP 508
ACMVD+LGRAG L EA ++I+ M + P+ VW ALL CRIH GE AA L +L
Sbjct: 308 ACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNS 367
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
E+ G + L+SNIYA + +W++V ++R MKN G++K S ++ K F+ AD+ +P
Sbjct: 368 ENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHP 427
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
K++Y+ + S+ IK+ GY+P+ S ALHDV+DE++ +L HSEKLA+A+GI+ P
Sbjct: 428 QSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPG 487
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
A +++TKNLRVC DCH+A +IS I +II+RD++RFHHF+ G+CSC+ YW
Sbjct: 488 APIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 166/347 (47%), Gaps = 55/347 (15%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
VL ACAS L GK VHG +R+G D +V ALVDMYAKCG D+ KVFD + +D
Sbjct: 19 VLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKD 78
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG------DVLK 229
+VSW M+ Y Q + E+AL LF+K ++E + + V+ +V +A Q G DV +
Sbjct: 79 VVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFR 138
Query: 230 ----------------------------------------------AQAVHGYAICNAFL 243
+ +H Y + N F
Sbjct: 139 EMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFD 198
Query: 244 ED-LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
L + N ++ MYA+ G+++ AR VFD +++++ +SW S++TGY +G+ EAL +FDE
Sbjct: 199 SAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDE 258
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCG 361
M+ +P+ VT L+++ AC++ G G +F + I A M D+ + G
Sbjct: 259 MRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAG 318
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
L+ A + + ++ W L++G +H + Q+LE
Sbjct: 319 RLNEAMELIEGMQMEPSSI-VWVALLSGCRIHANVELGEHAAKQLLE 364
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
++ + D +P+ V+ + ++ AC +G+ G+ HG + S D + NA++DMYAKCG
Sbjct: 3 KLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCG 62
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+D A +F+ I E++V SWN ++ GY G AL F +M EE ++ + ++++++
Sbjct: 63 MVDEASKVFDRI--KEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAV 120
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV--DMLGRAGCLYEAFDMIKQMPLP 479
++A + GL E F +M ++ ++ M D L + C + +I L
Sbjct: 121 IAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARL- 179
Query: 480 PNDSVWGALLLACRIHGEIAANYL 503
AL L +IH I N+
Sbjct: 180 ------AALRLGRQIHAYILRNHF 197
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 32/262 (12%)
Query: 52 YTTYGEPNTARSLFNSIH--NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG---- 105
Y+ G A LF + N + W+ +I A+A G ETL+++ M+
Sbjct: 89 YSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFREMQHGEANDA 148
Query: 106 -------------ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS-YVQAAL 151
+ N +T L ACA + + G+ +H I+R F S YV L
Sbjct: 149 LELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCL 208
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+DMYAK G D VFD + ++ VSWT ++T Y + +EAL +F + ++ GL D
Sbjct: 209 IDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDG 268
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI------QNSIVAMYARCGNVEKA 265
VT++ V A G + + G N+ ++ + +V + R G + +A
Sbjct: 269 VTLLVVLYACSHSGMIDQ-----GIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEA 323
Query: 266 -RLVFDMMEKRDLISWNSMLTG 286
L+ M + I W ++L+G
Sbjct: 324 MELIEGMQMEPSSIVWVALLSG 345
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 242/668 (36%), Positives = 350/668 (52%), Gaps = 18/668 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R IH+ +T SGL L L +I Y G + AR +F S D+ S WN++I Y
Sbjct: 140 RLIHALITVSGLGGPVL-LTNSLIDMYCKCGRIDWARLVFESA--DELDSVSWNSLIAGY 196
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN--SLILEGKVVHGDIIRTGFLS 143
G E L L M R G++ NSY LKAC SN S I GK++HG ++ G
Sbjct: 197 VRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDL 256
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK-----PEEALIL 198
D V AL+D YAK G +D K+F M ++V + MI + Q E EA+ L
Sbjct: 257 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 316
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F + Q G+ T S+ A + + +H D I N++V +Y+
Sbjct: 317 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 376
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G++E F K D++SW S++ G++QNGQ L LF E+ S KP+ T I+
Sbjct: 377 SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 436
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+SAC L + + G + H Y I + + ++N+ + MYAKCGD+D+A F +
Sbjct: 437 LSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKET--KNP 494
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
++ SW+V+I+ HG ++A++ F M G+ P+HITF +L ACSH GL++EG + F
Sbjct: 495 DIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYF 554
Query: 439 ADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-- 495
M K + P VKH AC+VD+LGRAG L EA I + +W +LL ACR+H
Sbjct: 555 EIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKA 614
Query: 496 ---GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
G+ A + +LEPE +VL+ NIY + ++R MK++G+KK S IE
Sbjct: 615 TDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIE 674
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYH 612
G + F DR +P + +Y ++E M EIK Y+ + + M++YH
Sbjct: 675 VGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYH 734
Query: 613 SEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
SEKLAV FGI++L A V+V KNLR C CH + S + R+II+RD RFH F G
Sbjct: 735 SEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDG 794
Query: 673 TCSCNDYW 680
+CSC DYW
Sbjct: 795 SCSCGDYW 802
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 247/541 (45%), Gaps = 52/541 (9%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQA----LHLGAKIIIKYTTYGEPNTARSLFNS 67
Y +L++ SL IH L +I L L ++ Y GE + A+ LF+
Sbjct: 22 YTKLVQCSTRTGSL--IHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDR 79
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ S WN++I Y G E + L+ R S + + +TF L C +
Sbjct: 80 MPKRNVVS--WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+++H I +G + +L+DMY KCG+ D VF+ D VSW +I Y
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYV 197
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ--LGDVLKAQAVHGYAICNAFLED 245
+ +E L L K + GL +S + S A G + + +HG A+ D
Sbjct: 198 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 257
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ-----NGQASEALLLF 300
+ + +++ YA+ G++E A +F +M +++ +N+M+ G++Q + A+EA+ LF
Sbjct: 258 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 317
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
EMQ+ KP+ T ++ AC+ + + + G++ H I N++ D + NA++++Y+
Sbjct: 318 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 377
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G ++ F+ + +V SW LI G+ +G L F ++L G KPD T +
Sbjct: 378 GSIEDGLKCFHST--PKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 435
Query: 421 ILSACSHAGLIDEGR--------------------------KC----FADMT-KLSVKPE 449
+LSAC++ + G KC A+MT K + P+
Sbjct: 436 MLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPD 495
Query: 450 VKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQL 506
+ ++ M+ + GC EA F+++K + PN + +L+AC HG + L
Sbjct: 496 IVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACS-HGGLVEEGLRYF 554
Query: 507 E 507
E
Sbjct: 555 E 555
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 9/380 (2%)
Query: 105 GISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG 164
G+ +S T+ +++ ++ GK+ H +I+T F ++ L+ MY KCG+TD
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 165 CKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
K+FD M R++VSW +I+ Y Q E + LF++ + L D T + S G+
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
D+ + +H + + + NS++ MY +CG ++ ARLVF+ ++ D +SWNS++
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC--TYLGSRQLGRKFHGYIINSN 342
GY++ G E L L +M N + AC + S + G+ HG +
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLG 253
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY-----GMHGHGR 397
+ +D + A++D YAK GDL+ A +F + P + NV +N +IAG+
Sbjct: 254 LDLDVVVGTALLDTYAKIGDLEDATKIFK-LMP-DPNVVMYNAMIAGFLQMETMADEFAN 311
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
+A+ F +M G+KP TF+SIL ACS + G++ A + K +++ + +V
Sbjct: 312 EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALV 371
Query: 458 DMLGRAGCLYEAFDMIKQMP 477
++ +G + + P
Sbjct: 372 ELYSLSGSIEDGLKCFHSTP 391
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/570 (35%), Positives = 332/570 (58%), Gaps = 7/570 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L + A + I++G +HG I+++G V L++ Y+K D + F++ +
Sbjct: 21 LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+W+ +I+ + Q E P +L +K L D + S + G L ++VH
Sbjct: 81 ATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHC 140
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
++ + D+ + +S+V MYA+CG + AR +FD M R++++W+ M+ GY Q G+ E
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEE 200
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL LF E + N + ++S C +LGR+ G I S+ + + ++++
Sbjct: 201 ALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVS 260
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+Y+KCGDL+ A +F+++ RN+ WN ++ H H +K +E F +M G+KP+
Sbjct: 261 LYSKCGDLEGAYQVFDEV--PMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
ITF ++L+ACSHAGL+DEG+ F M + ++P KHYA +VDMLGRAG L EA +++
Sbjct: 319 ITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTN 378
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ P +SVWGALL +C IH AA+ +F+L P +G + +SN YAA ++ +
Sbjct: 379 MPIDPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDA 438
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
K R+ ++++G KK S +E + F +R + KE+Y+K+ + E++ AGY+
Sbjct: 439 AKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYV 498
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
D S L +V+ +++ + YHSE+LA+AFG++ + ++V KNLRVC DCH+A +F+
Sbjct: 499 ADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFM 558
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S RR IIVRD NRFH FE G CSCNDYW
Sbjct: 559 SICTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 188/368 (51%), Gaps = 6/368 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGE-PNTARSLFNSIHNDKSYSFLWNTMIRAY 85
Q+H + SGL + L A +I + + + P +R F + + + W+++I +
Sbjct: 36 QLHGYIVKSGL--SLIPLVANNLINFYSKSQLPFDSRRAFED--SPQKSATTWSSIISCF 91
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A N +LE M + + + P K+C S GK VH ++TG+ +D
Sbjct: 92 AQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADV 151
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V ++LVDMYAKCG+ K+FDEM +R++V+W+ M+ Y Q + EEAL LF++ E
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
L + + +V S + + + G I ++F + +S+V++Y++CG++E A
Sbjct: 212 NLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGA 271
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VFD + R+L WN+ML Q+ + + LF M+ S KPN +T L +++AC++
Sbjct: 272 YQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G G+ + + S ++ +++DM + G L+ A + ++ P + S W
Sbjct: 332 GLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNM-PIDPTESVWGA 390
Query: 386 LIAGYGMH 393
L+ +H
Sbjct: 391 LLTSCTIH 398
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/638 (34%), Positives = 360/638 (56%), Gaps = 18/638 (2%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G A+S+FN + S WNT++ N +E L+L+ R +
Sbjct: 246 YAKCGLVEDAKSVFNWMETRDMVS--WNTLMAGLQLNECELEALQLFHESRATMGKMTQS 303
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T+ V+K CA+ + + +H +++ GF V AL D Y+KCG+ D +F
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363
Query: 172 S-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+ R++VSWT +I+ Q A++LF + +++ ++ + T ++ A +L
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL---SILPP 420
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
Q +H I + + +++A Y++ G+ E A +F M+E++D+++W++ML+ + Q
Sbjct: 421 Q-IHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQA 479
Query: 291 GQASEALLLFDEMQNSDCKPN--PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
G A LF++M KPN ++++I AC G Q GR+FH I
Sbjct: 480 GDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQ-GRQFHAISIKYRYHDAIC 538
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ +A++ MY++ G++D+A+ +F ++R++ SWN +I+GY HG+ KA+E F QM
Sbjct: 539 VSSALVSMYSRKGNIDSAQIVFE--RQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEA 596
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLY 467
G++ D +TF +++ C+H GL+ EG++ F M + + P ++HYACMVD+ RAG L
Sbjct: 597 SGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLD 656
Query: 468 EAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYA 522
E +I+ MP P VW LL ACR+H G+ +A+ L LEP + +VL+SNIYA
Sbjct: 657 ETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYA 716
Query: 523 ASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAV 582
A+ KW+E ++R+ M + +KK A S I+ + F D+ +P ++YKK++ +
Sbjct: 717 AAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIIT 776
Query: 583 EIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCND 642
+K GY P+ S LHD+ ++ +E ML HSE+LA+AFG++ P +Q+ KNLRVC D
Sbjct: 777 RLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGD 836
Query: 643 CHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
CH + +S I R+II+RD +RFHHF GG CSC D+W
Sbjct: 837 CHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 185/347 (53%), Gaps = 2/347 (0%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N ++ YA G +E L+ +S RR G+ +S T VLKAC S + G+ +H ++
Sbjct: 68 NRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127
Query: 139 TGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
G + +LVDMY KCG +G +VF+ M +++V+WT ++T A+ E +
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF + + EG+ + T SV SAV G + Q VH ++ + + NS++ MYA
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG VE A+ VF+ ME RD++SWN+++ G N EAL LF E + + K T
Sbjct: 248 KCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYAT 307
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ C L L R+ H ++ + + A+ D Y+KCG+L A N+F+ +
Sbjct: 308 VIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFS-MTTGS 366
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
RNV SW +I+G +G A+ FS+M E+ V P+ T++++L A
Sbjct: 367 RNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 216/457 (47%), Gaps = 17/457 (3%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C + Q+H G + G ++ Y G +F +
Sbjct: 105 VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM--P 162
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
K W +++ A+ E + L+ MR GI N +TF VL A AS + G+
Sbjct: 163 KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQR 222
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH ++ G S +V +L++MYAKCG +D VF+ M RD+VSW ++ + E
Sbjct: 223 VHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNEC 282
Query: 192 PEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EAL LF +++ G ++ S T +V L + A+ +H + + F +
Sbjct: 283 ELEALQLFHESRATMGKMTQS-TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMT 341
Query: 251 SIVAMYARCGNVEKARLVFDMME-KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
++ Y++CG + A +F M R+++SW ++++G IQNG A++LF M+
Sbjct: 342 ALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVM 401
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN T ++ A + L + H +I +N + + A++ Y+K G + A ++
Sbjct: 402 PNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSI 457
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS--H 427
F I +++V +W+ +++ + G A F++M +G+KP+ T +S++ AC+
Sbjct: 458 FKMIE--QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPS 515
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
AG +D+GR+ A K + + +V M R G
Sbjct: 516 AG-VDQGRQFHAISIKYRYHDAICVSSALVSMYSRKG 551
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 265 ARLVFDMMEKRDL-ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
AR D + +RD + N +L Y + G E L F + + T ++ AC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 324 YLGSRQLGRKFHGYIINSNM-KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ R LG + H + + + + +++DMY KCG + +F + ++NV +
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGM--PKKNVVT 168
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W L+ G + + F +M EG+ P+ TF S+LSA + G +D G++ A
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHG-EIAA 500
K + V +++M + G + +A + M D V W L+ +++ E+ A
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM--ETRDMVSWNTLMAGLQLNECELEA 286
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
LF G + + YA V KL ++K L + V+++ GF
Sbjct: 287 LQLFHESRATMGK--MTQSTYAT------VIKLCANLKQLALARQLHSCVLKH-----GF 333
Query: 561 HTADRVNPYWKEVYKKVESMA 581
H V + Y K +A
Sbjct: 334 HLTGNVMTALADAYSKCGELA 354
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 242/680 (35%), Positives = 372/680 (54%), Gaps = 95/680 (13%)
Query: 59 NTARSLFNSIHNDKS--YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
N +++ ++IH +S S WN+++ Y+ HC N F F
Sbjct: 5 NPSKTTSSTIHYTRSPLISVSWNSIVSVYS---HC--------------FVPNDAVFLF- 46
Query: 117 LKACASNSLILEGKVVHGDIIR-TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+ IL V +I+ +GFL +V ALVDMYAKCG+ +D KVF+ M +D
Sbjct: 47 -REMTVGYGILPDTVGVVNILPVSGFLG-FFVGNALVDMYAKCGKMEDASKVFERMRFKD 104
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT---------------------- 213
+V+W M+T Y Q + E+AL LF K ++E + D VT
Sbjct: 105 VVTWNAMVTGYSQNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFR 164
Query: 214 -------------IVSVASAVGQLGDVLKAQAVHGYAIC-------NAFLEDLCIQNSIV 253
++S+ SA +G +L + H Y++ N +DL + N+++
Sbjct: 165 QMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALI 224
Query: 254 AMYARCGNVEKARLVFDMM--EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD--CK 309
MYA+C ++E AR +FD + + RD+++W M+ GY Q+G A+ AL LF EM D
Sbjct: 225 DMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIV 284
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL---RNAVMDMYAKCGDLDTA 366
PN T ++ AC L + + G++ H Y++ + +ID+ + N ++DMY+K GD+DTA
Sbjct: 285 PNDFTISCVLMACARLAALKFGKQIHAYVLRRS-RIDSDVLFVANCLIDMYSKSGDVDTA 343
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+ +F+ + S+RN SW L+ GYGMHG + D ITF +L ACS
Sbjct: 344 QVVFDSM--SKRNAVSWTSLLTGYGMHG--------------AALVLDGITFLVVLYACS 387
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+G++D G F M+K V P V+HYACM D+ GRAG L EA +I M + P VW
Sbjct: 388 HSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVW 447
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
ALL ACR H E AA L +L+ ++ G + L+SNIYA + +W++V ++R MK
Sbjct: 448 IALLSACRTHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRT 507
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK +S ++ K ++ F+ DR + +++Y+ + + IK GY+P + +LHDV
Sbjct: 508 GIKKRPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKAIGYVPQTNFSLHDV 567
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+DE++ L HSEKLA+A+ I+ L P A +++TKNLR+C D HSA +IS I +II+
Sbjct: 568 DDEEKGDQLLEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIIL 627
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD++RFH F+ G+CSC YW
Sbjct: 628 RDSSRFHQFKNGSCSCKGYW 647
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 186/393 (47%), Gaps = 35/393 (8%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSY--SFLWNTMIRAYANNGHCVETLELYSTMRRSG 105
++ Y+ G A SLF + +K W+++I YA G E ++++ M
Sbjct: 111 MVTGYSQNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCR 170
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF-------LSDSYVQAALVDMYAKC 158
N T +L ACAS +L GK H ++ D V AL+DMYAKC
Sbjct: 171 CRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKC 230
Query: 159 GQTDDGCKVFDEMSV--RDLVSWTVMITAYEQAEKPEEALILFQKTQQ--EGLLSDSVTI 214
+ +FDE+ RD+V+WTVMI Y Q AL LF + + ++ + TI
Sbjct: 231 KSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTI 290
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLED--LCIQNSIVAMYARCGNVEKARLVFDMM 272
V A +L + + +H Y + + ++ L + N ++ MY++ G+V+ A++VFD M
Sbjct: 291 SCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSM 350
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR 332
KR+ +SW S+LTGY G AL+L + +T L+++ AC++ G G
Sbjct: 351 SKRNAVSWTSLLTGY---GMHGAALVL-----------DGITFLVVLYACSHSGMVDRGI 396
Query: 333 KFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
Y ++ + +D + + + D++ + G L A + ND+ E W L++
Sbjct: 397 DLF-YRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDM-SMEPTPVVWIALLSAC 454
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
H + A EF ++ L E +K D+ ++LS
Sbjct: 455 RTHSNEELA-EFAAKKLLE-LKADNDGTYTLLS 485
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/661 (34%), Positives = 358/661 (54%), Gaps = 10/661 (1%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
QIH+ + + + L +I Y G N A LF+ H+ W ++I +
Sbjct: 163 QIHTQIIINNYTSLPF-LFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLS 221
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+ ++ L L++ MR SG N +TF +L A A+ ++L G+ +H I + GF ++ +
Sbjct: 222 HFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIF 281
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V ALVDMYAKC +VFD+M R+LVSW MI + + A+ +F+ +E
Sbjct: 282 VGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREK 341
Query: 207 -LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
++ + V++ SV SA +G + + VHG + + + NS++ MY +C ++
Sbjct: 342 TVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEG 401
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+F + RD+++WN ++ G++QN + EA F M+ P+ + ++ + L
Sbjct: 402 VKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASL 461
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ G H II + + +++ MYAKCG L A +F I + NV SW
Sbjct: 462 AALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGI--EDHNVISWTA 519
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I+ Y +HG + +E F ML EG++P H+TF +LSACSH G ++EG F M K+
Sbjct: 520 MISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH 579
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----A 499
+ P +HYACMVD+LGRAG L EA I+ MP+ P SVWGALL ACR +G + A
Sbjct: 580 DMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREA 639
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A LF++EP + G +VL++N+ S + E ++R M G++K S I+
Sbjct: 640 AERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFV 699
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F DR + E+YK +E + +K GY+ + + +E+ + E L YHSEKLA+A
Sbjct: 700 FTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALA 759
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG++ L ++ +++ KNLR C CH+ + S I+ R+IIVRD NRFH F G CSC DY
Sbjct: 760 FGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDY 819
Query: 680 W 680
W
Sbjct: 820 W 820
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 217/429 (50%), Gaps = 13/429 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+HS + G + + +G ++ Y + ++A +F+ + S WN+MI +
Sbjct: 265 QQLHSLIHKHGF-DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVS--WNSMIVGF 321
Query: 86 ANNGHCVETLELYS-TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+N + ++ +R + N + VL ACA+ + G+ VHG +++ G +
Sbjct: 322 FHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPL 381
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+YV +L+DMY KC D+G K+F + RD+V+W V++ + Q +K EEA F ++
Sbjct: 382 TYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRR 441
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
EG+L D + +V + L + + A+H I +++++CI S++ MYA+CG++
Sbjct: 442 EGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVD 501
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A VF+ +E ++ISW +M++ Y +G A++ + LF+ M + +P+ VT + ++SAC++
Sbjct: 502 AYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH 561
Query: 325 LGSRQLG-RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
G + G F+ +M ++D+ + G LD A+ + P + S W
Sbjct: 562 TGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESM-PMKPTPSVW 620
Query: 384 NVLIAG---YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
L+ YG GR+A E +M E P + + + C+ +G ++E +
Sbjct: 621 GALLGACRKYGNLKMGREAAERLFEM--EPYNPG--NYVLLANMCTRSGRLEEANEVRRL 676
Query: 441 MTKLSVKPE 449
M V+ E
Sbjct: 677 MGVNGVRKE 685
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 122/233 (52%), Gaps = 5/233 (2%)
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK--RDLISWNSMLTGY 287
A +H I N + + N+++ +YA+CG + +A L+F + + +++W S++T
Sbjct: 161 ATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHL 220
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
+AL LF++M+ S PN T ++SA G++ H I +
Sbjct: 221 SHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANI 280
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ A++DMYAKC D+ +A +F+ + ERN+ SWN +I G+ + +A+ F +L
Sbjct: 281 FVGTALVDMYAKCADMHSAVRVFDQM--PERNLVSWNSMIVGFFHNNLYDRAVGVFKDVL 338
Query: 408 -EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
E+ V P+ ++ +S+LSAC++ G ++ GR+ + K + P ++DM
Sbjct: 339 REKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDM 391
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 323 TYLGSRQL--GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
T + +R L + H II +N L N ++++YAKCG L+ A +F+ H + +
Sbjct: 151 TAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTI 210
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
+W LI +AL F+QM G P+ TF+SILSA + ++ G++ +
Sbjct: 211 VTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSL 270
Query: 441 MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+ K + +VDM + ++ A + QMP N W ++++
Sbjct: 271 IHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMIVG 320
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 335/560 (59%), Gaps = 10/560 (1%)
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
AS+S + K +H +IRTGF + + L++ G +VFDEM + W
Sbjct: 19 ASSSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWN 78
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+ Y + + P E+++L++K + G+ D T V A+ QLG + ++H + + N
Sbjct: 79 TLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKN 138
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F + +V MY + G + A +F+ M+ +DL++WN+ + +Q G ++ AL F
Sbjct: 139 GFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYF 198
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
++M + + T + ++SAC LGS +G + + ++ + + NA +DM+ KC
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKC 258
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G + A +F+D+ +RNV SW+ +I GY M+G +AL F+ M EG++P+++TF
Sbjct: 259 GSTEAARVLFDDM--KQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLG 316
Query: 421 ILSACSHAGLIDEGRKCFADMTKLS---VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+LSACSHAGL++EG++ F+ M +L+ ++P +HYACMVD+LGR+G L EA++ IK+M
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMR 376
Query: 478 LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ P+ +WGALL AC +H G+ A+ L + P+ Y VL+SNIYAA+ KW V K
Sbjct: 377 VEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDK 436
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R M+ G KK AA+S +E+ I F+ D +P K +Y+K++ + +I+ GY+PD
Sbjct: 437 VRSKMRKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPD 496
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
HDVE E++E L++HSEKLA+AFG++N ++V KNLR C+DCH +F+S
Sbjct: 497 TGSVFHDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSKFVSR 556
Query: 653 IYRRKIIVRDANRFHHFEGG 672
+ R+II+RD NRFHHF G
Sbjct: 557 LTSREIIMRDKNRFHHFRNG 576
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 227/453 (50%), Gaps = 23/453 (5%)
Query: 6 PSTEGFYDQLLK-SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
P T+ +LL+ S + L++IH+ + +G ++ L +++ G+ AR +
Sbjct: 7 PLTKQMLSELLRASSSKPKQLKKIHAVVIRTGF-SEKNSLLTQLLENLVLVGDMCYARQV 65
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + K FLWNT+ + Y N E++ LY MR G+ + +T+PFV+KA +
Sbjct: 66 FDEM--PKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
++ G +H +++ GF V LV MY K G+ +F+ M V+DLV+W I
Sbjct: 124 VLPCGVSLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIA 183
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Q AL F K + + DS T+VS+ SA GQLG + + ++ A
Sbjct: 184 VCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIEC 243
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
++ ++N+ + M+ +CG+ E AR++FD M++R+++SW++M+ GY NG + EAL LF MQ
Sbjct: 244 NIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQ 303
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII---NSNMKIDATLRNAVMDMYAKCG 361
N +PN VT L ++SAC++ G G+++ ++ + N++ ++D+ + G
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSG 363
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPD---- 414
L+ A + E + W L+ +H G+K + + PD
Sbjct: 364 LLEEAYEFIKKMR-VEPDTGIWGALLGACAVHRDMILGQKVADVLVE-----TAPDIGSY 417
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
H+ ++I +A +D+ R + M KL K
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVR---SKMRKLGTK 447
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 348/610 (57%), Gaps = 11/610 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTM--RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
N + ++ G V++ +L S NS+ + L+ C GK +H +I
Sbjct: 5 NNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++ G D + L++MY K D K+FDEM R+ +S+ +I Y ++ + EA+
Sbjct: 65 LKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF + +E +L + T SV A + + +H + I D+ + N+++ +Y
Sbjct: 125 ELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVY 183
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+CG +E + +F R+ ++WN+++ G++Q G +AL LF M + VT
Sbjct: 184 AKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYS 243
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
+ AC L + + G + H + + D + NA++DMYAKCG + A +F+ + +
Sbjct: 244 SALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLM--N 301
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+++ SWN +I+GY MHG GR+AL F +M E VKPD +TF +LSAC++AGL+D+G+
Sbjct: 302 KQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQA 361
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F M + ++P ++HY CMV +LGR G L +A +I ++P P+ VW ALL AC IH
Sbjct: 362 YFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIH 421
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
G I+A + ++EP+ VL+SN+YA + +W V +R++MK KG+KK S
Sbjct: 422 NDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSW 481
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
IE + F D +P + + +E + ++ K AGY+P+ + L DVEDE++E +L
Sbjct: 482 IESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLW 541
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSE+LA++FGI+ + +++ KNLR+C DCH+A + IS + +R+I+VRD NRFHHF+
Sbjct: 542 VHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQ 601
Query: 671 GGTCSCNDYW 680
G CSC DYW
Sbjct: 602 EGLCSCGDYW 611
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 12/280 (4%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF-NS 67
+ +L++C + L QIH + GL + + + ++ Y G + LF S
Sbjct: 141 FASVLQACATMEGLNLGNQIHCHVIKIGL-HSDVFVSNALMDVYAKCGRMENSMELFAES 199
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
H + WNT+I + G + L L+ M + + T+ L+ACAS + +
Sbjct: 200 PHRN---DVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALE 256
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +H ++T F D V AL+DMYAKCG D VFD M+ +D VSW MI+ Y
Sbjct: 257 PGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYS 316
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
EAL +F K Q+ + D +T V V SA G + + QA I + +E C
Sbjct: 317 MHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEP-C 375
Query: 248 IQN--SIVAMYARCGNVEKA-RLVFDMMEKRDLISWNSML 284
I++ +V + R G+++KA +L+ ++ + ++ W ++L
Sbjct: 376 IEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/663 (33%), Positives = 371/663 (55%), Gaps = 17/663 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++H+ G + + +I Y+ G A+++F + S WNT++
Sbjct: 221 RRVHAQSVKFG-CRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVS--WNTLMAGL 277
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
N H +E L+L+ R S + T+ V+K CA+ + + +H +++ GF SD
Sbjct: 278 LLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDG 337
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
V A++D Y+KCG+ DD +F M +++VSWT MI Q A LF + ++
Sbjct: 338 NVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMRE 397
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+ + + T +V +A +L Q +H I + + +++A Y++ GN E+
Sbjct: 398 DNVKPNEFTYSTVLTASIP---ILLPQ-IHAQIIKTNYQHAPSVGTALLASYSKLGNTEE 453
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC-T 323
A +F M++ +D+++W++ML+ Y Q G A +F +M KPN T + AC +
Sbjct: 454 ALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACAS 513
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
GR+FH I + + +A++ MYA+ G +D+A +F ++R++ SW
Sbjct: 514 PTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFE--RQTDRDLVSW 571
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT- 442
N +I+GY HG+ ++AL+ F QM G++ D TF +++ C+HAGL+ EG++ F M
Sbjct: 572 NSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVM 631
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GE 497
++ P ++HY+CMVD+ RAG L E ++I+ MP P VW LL ACR+H G+
Sbjct: 632 DHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGK 691
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+AA L LEP+ + +VL+SNIYAA+ +W+E ++R+ M +K +KK A S I+ +
Sbjct: 692 LAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKV 751
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D+ +P +++Y K+++M +K GY P+ S LHD+ +E +E ML HSE+LA
Sbjct: 752 HSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLA 811
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+AFG++ P +Q+ KNLRVC DCH + +S I R+II+RD +RFHHF G CSC
Sbjct: 812 LAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCG 871
Query: 678 DYW 680
D+W
Sbjct: 872 DFW 874
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 170/310 (54%), Gaps = 2/310 (0%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
VLK C + G+ +H ++ GF ++ V ALVDMY KCG +DG VF+ M R
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
++V+WT ++T Y Q + + LF + + EG+ + T SV SAV G V + VH
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
++ + + NS++ MY++CG VE+A+ VF ME RD++SWN+++ G + N
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQL 284
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EAL LF + + S K + T ++ C L L R+ H ++ D + A+M
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIM 344
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
D Y+KCG+LD A N+F + P +NV SW +I G + A FS+M E+ VKP+
Sbjct: 345 DAYSKCGELDDAFNIFL-LMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPN 403
Query: 415 HITFTSILSA 424
T++++L+A
Sbjct: 404 EFTYSTVLTA 413
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 218/472 (46%), Gaps = 13/472 (2%)
Query: 3 RLGPSTEGFYDQLLKSCNFL---ASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
R G ++LK C + S Q+H G + +G ++ Y G
Sbjct: 93 RCGRVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVE 152
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
R +F + K W +++ Y C + + L+ MR G+ N +TF VL A
Sbjct: 153 DGRVVFEGM--PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSA 210
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
AS + G+ VH ++ G S +V +L++MY+KCG ++ VF +M RD+VSW
Sbjct: 211 VASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSW 270
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
++ E EAL LF ++ T +V L + A+ +H +
Sbjct: 271 NTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLK 330
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRDLISWNSMLTGYIQNGQASEALL 298
+ F D + +I+ Y++CG ++ A +F +M ++++SW +M+ G IQN A
Sbjct: 331 HGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAA 390
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
LF M+ + KPN T +++A + L + H II +N + ++ A++ Y+
Sbjct: 391 LFSRMREDNVKPNEFTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYS 446
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
K G+ + A ++F I ++V +W+ +++ Y G A F +M +G+KP+ T
Sbjct: 447 KLGNTEEALSIFKMI--DHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTI 504
Query: 419 TSILSAC-SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA 469
+S + AC S ID+GR+ A K + + + +V M R G + A
Sbjct: 505 SSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSA 556
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 22/322 (6%)
Query: 261 NVEKARLVFDMMEKRDLISWNS----MLTGYIQNGQA-SEALLLFDEMQNSDCKPNPVTA 315
N AR D M RD + +S + Y + G+ EAL F ++ +
Sbjct: 44 NAPGARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALDHFVDVHRCGRVQGAAVS 103
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNM-KIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+L C + R G + H + + + + A++DMY KCG ++ +F +
Sbjct: 104 RVL-KVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM- 161
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
+RNV +W L+ GY + F +M EGV P+ TFTS+LSA + G +D G
Sbjct: 162 -PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLG 220
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
R+ A K + V +++M + G + EA + +QM D V L+A +
Sbjct: 221 RRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQM--ETRDMVSWNTLMAGLL 278
Query: 495 HGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
E QLE + S + + + V KL ++K L + V+++
Sbjct: 279 LNE------HQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKH- 331
Query: 555 KDIQGFHTADRVNPYWKEVYKK 576
GFH+ V + Y K
Sbjct: 332 ----GFHSDGNVMTAIMDAYSK 349
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 242/668 (36%), Positives = 350/668 (52%), Gaps = 18/668 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R IH+ +T SGL L L +I Y G + AR +F S D+ S WN++I Y
Sbjct: 61 RLIHALITVSGLGGPVL-LTNSLIDMYCKCGRIDWARLVFESA--DELDSVSWNSLIAGY 117
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN--SLILEGKVVHGDIIRTGFLS 143
G E L L M R G++ NSY LKAC SN S I GK++HG ++ G
Sbjct: 118 VRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDL 177
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK-----PEEALIL 198
D V AL+D YAK G +D K+F M ++V + MI + Q E EA+ L
Sbjct: 178 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 237
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F + Q G+ T S+ A + + +H D I N++V +Y+
Sbjct: 238 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 297
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G++E F K D++SW S++ G++QNGQ L LF E+ S KP+ T I+
Sbjct: 298 SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 357
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+SAC L + + G + H Y I + + ++N+ + MYAKCGD+D+A F +
Sbjct: 358 LSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKE--TKNP 415
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
++ SW+V+I+ HG ++A++ F M G+ P+HITF +L ACSH GL++EG + F
Sbjct: 416 DIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYF 475
Query: 439 ADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-- 495
M K + P VKH AC+VD+LGRAG L EA I + +W +LL ACR+H
Sbjct: 476 EIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKA 535
Query: 496 ---GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
G+ A + +LEPE +VL+ NIY + ++R MK++G+KK S IE
Sbjct: 536 TDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIE 595
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYH 612
G + F DR +P + +Y ++E M EIK Y+ + + M++YH
Sbjct: 596 VGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYH 655
Query: 613 SEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
SEKLAV FGI++L A V+V KNLR C CH + S + R+II+RD RFH F G
Sbjct: 656 SEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDG 715
Query: 673 TCSCNDYW 680
+CSC DYW
Sbjct: 716 SCSCGDYW 723
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 220/471 (46%), Gaps = 44/471 (9%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN++I Y G E + L+ R S + + +TF L C + G+++H I
Sbjct: 9 WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+G + +L+DMY KCG+ D VF+ D VSW +I Y + +E L
Sbjct: 69 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQ--LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
L K + GL +S + S A G + + +HG A+ D+ + +++
Sbjct: 129 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDT 188
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ-----NGQASEALLLFDEMQNSDCKP 310
YA+ G++E A +F +M +++ +N+M+ G++Q + A+EA+ LF EMQ+ KP
Sbjct: 189 YAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKP 248
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ T ++ AC+ + + + G++ H I N++ D + NA++++Y+ G ++ F
Sbjct: 249 SEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCF 308
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ + +V SW LI G+ +G L F ++L G KPD T + +LSAC++
Sbjct: 309 HS--TPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAA 366
Query: 431 IDEGR--------------------------KC----FADMT-KLSVKPEVKHYACMVDM 459
+ G KC A+MT K + P++ ++ M+
Sbjct: 367 VKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISS 426
Query: 460 LGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLE 507
+ GC EA F+++K + PN + +L+AC HG + L E
Sbjct: 427 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACS-HGGLVEEGLRYFE 476
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 152/314 (48%), Gaps = 9/314 (2%)
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
M R++VSW +I+ Y Q E + LF++ + L D T + S G+ D+
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +H + + + NS++ MY +CG ++ ARLVF+ ++ D +SWNS++ GY++
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSAC--TYLGSRQLGRKFHGYIINSNMKIDAT 348
G E L L +M N + AC + S + G+ HG + + +D
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY-----GMHGHGRKALEFF 403
+ A++D YAK GDL+ A +F + P + NV +N +IAG+ +A+ F
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFK-LMP-DPNVVMYNAMIAGFLQMETMADEFANEAMYLF 238
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
+M G+KP TF+SIL ACS + G++ A + K +++ + +V++ +
Sbjct: 239 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 298
Query: 464 GCLYEAFDMIKQMP 477
G + + P
Sbjct: 299 GSIEDGLKCFHSTP 312
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 332/586 (56%), Gaps = 12/586 (2%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M R+ +S+++ T+ ++K C + + ++VH + G+ +++ L++MY K G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
D+ +FDEM R++VSWT MI+AY + +AL +EG+ + T SV A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
L L + +HG + D+ ++++++ Y++ G A VF+ M DL+ W
Sbjct: 127 CDGL---LNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVW 183
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
NS++ G+ QN E L L+ M+ +D + T ++ ACT L +LGR+ H +++
Sbjct: 184 NSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK 243
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ D L NA++DMY KCG L+ A +F + +E++V SW+ +IAG +G AL
Sbjct: 244 YDQ--DLILNNALLDMYCKCGSLEDANLLFTRMM-TEKDVISWSTMIAGLAQNGFSADAL 300
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDM 459
+ F M +G KP++IT +L ACSHAGL+++G F M + + P +HY C++D+
Sbjct: 301 KLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDL 360
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYF 514
LGRAG L EA +I +M P+ W LL ACR+H + AA + +L+P G +
Sbjct: 361 LGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTY 420
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
+L+SNIYA S KW +V ++R M+ +G+KK S IE K + F D +P +E+
Sbjct: 421 ILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIK 480
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
+++ + + GY+PD + L D+E E E L YHSEKLA+ FG+M+L + + +
Sbjct: 481 RELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIR 540
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C DCH + +S + R I++RD R+HHF GG CSC DYW
Sbjct: 541 KNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 214/388 (55%), Gaps = 16/388 (4%)
Query: 12 YDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L+K C +++Q +H + ++G + + +I Y +G + AR+LF+ +
Sbjct: 19 YSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINT-LINMYVKFGLLDEARNLFDEM 77
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ S W TMI AY+N+ + L+ M R G+ N YT+ VL+AC +L
Sbjct: 78 PDRNVVS--WTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDG---LLN 132
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
+ +HG I++ G SD +V++AL+D Y+K G+ D VF+EM DLV W +I + Q
Sbjct: 133 LRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQ 192
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+E L L+++ ++ ++D T+ SV A L + + VH + + + +DL +
Sbjct: 193 NSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL--KYDQDLIL 250
Query: 249 QNSIVAMYARCGNVEKARLVFD-MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
N+++ MY +CG++E A L+F MM ++D+ISW++M+ G QNG +++AL LF+ M++
Sbjct: 251 NNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKG 310
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDT 365
KPN +T L ++ AC++ G G ++ + + ID + ++D+ + G LD
Sbjct: 311 PKPNYITILGVLFACSHAGLVNDGW-YYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDE 369
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMH 393
A + ++++ E + +W +L+ +H
Sbjct: 370 AVKLIHEMN-HEPDAVTWRILLGACRVH 396
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/681 (34%), Positives = 373/681 (54%), Gaps = 23/681 (3%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
T F ++ + CN L + R + + + + L K+I YT A +LF+
Sbjct: 32 TVEFQNREVLICNHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDE 91
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ S WN+MI G ++++ M + S + ++ C ++
Sbjct: 92 MPLRDVVS--WNSMISGCVECGDIDTAVKMFDEMPERSVVS----WTAMVNGCFRFGMVD 145
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+ + + + + D A+V Y + G+ DD K+F +M ++++SWT MI +
Sbjct: 146 QAERLFCQMP----VKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLD 201
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q E+ EAL LF+ + + S S T V +A VHG+ I + FL +
Sbjct: 202 QNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEY 261
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ S++ +YA C E +R VF M + W ++L+GY N + +AL +F EM +
Sbjct: 262 VTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNS 321
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN T +++C+ LG+ G++ HG + + A + N+++ MY+ G+++ A
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAV 381
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
++F +I ++++ SWN +I G HG G+ A F QM+ +PD ITFT +LSACSH
Sbjct: 382 SVFIEIF--KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSH 439
Query: 428 AGLIDEGRKCFADMTKL--SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
G + +GRK F ++ + +++HY CMVD+LGR G L EA +I+ M + PN+ VW
Sbjct: 440 CGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVW 499
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
ALL ACR+H GE AA +F L+ + + +VL+SNIYA++ +W V KLR MK K
Sbjct: 500 LALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKLRVKMKQK 559
Query: 541 G-LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD 599
G +KKP + V+ GK + F + DR P+ +++K+E + ++K GY+PD ALHD
Sbjct: 560 GIMKKPGSSWVVIRGKKHE-FFSGDR--PHCLRIFEKLEFLREKLKELGYVPDYRSALHD 616
Query: 600 VEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKII 659
VEDE +E ML YHSE+LA+AFG++N + V V KNLRVC DCH+ + IS + KI+
Sbjct: 617 VEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIV 676
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
+RD RFHHF+ G CSC DYW
Sbjct: 677 LRDPTRFHHFKNGMCSCGDYW 697
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 241/683 (35%), Positives = 363/683 (53%), Gaps = 22/683 (3%)
Query: 12 YDQLLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ +L +C+ FLA+ R IH +GL Q + + + ++ Y G A +LF +
Sbjct: 131 FVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEI-VASALVSMYGRCGSLRDANALFGHL 189
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
LWN MI A + NG E LE++ M + GI + TF V KAC+S+ +
Sbjct: 190 ERHLDV-VLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRA 248
Query: 129 GKV--VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+V H + TG SD V ALV+ YA+CG+ D K F EM R+ VSWT MI A+
Sbjct: 249 SQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAF 308
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q A+ F EG++ T+ + A+ D+ A+ V A + D+
Sbjct: 309 TQIGHLL-AVETFHAMLLEGVVPTRSTLFA---ALEGCEDLRVARLVEAIAQEIGVVTDV 364
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKR--DLISWNSMLTGYIQNGQASEALLLFDEMQ 304
I +V YARC E A VF E+ D +M+ Y Q L+
Sbjct: 365 AIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAI 424
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDL 363
P+ + + + AC L + GR+ H + + + D TL NA++ MY +CG L
Sbjct: 425 ERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSL 484
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A + F+ + P+ R+ SWN +++ HG + F ML+EG + I F ++LS
Sbjct: 485 RDARDAFDGM-PA-RDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLS 542
Query: 424 ACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
AC+HAGL+ G + F+ MT V P +HY CMVD+LGR G L +A +++ MP+PP+
Sbjct: 543 ACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDA 602
Query: 483 SVWGALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+ W AL+ ACRI+G+ AA + +L +HT +V + NIY+A+ +W + +R+ M
Sbjct: 603 ATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIM 662
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
+ GL+K S IE + F DR +P + +Y ++E + I+ AGY L
Sbjct: 663 ADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVL 722
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
HDVE+E +E +L +HSEKLA+AFG+M+ + ++V KNLRVC DCH+A +FIS ++ R+
Sbjct: 723 HDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGRE 782
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I+VRD RFHHF+ G CSC DYW
Sbjct: 783 IVVRDVRRFHHFKDGACSCGDYW 805
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 227/492 (46%), Gaps = 17/492 (3%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
+L++ CN +A + +HS +++S +++ +L + ++ Y G +A +F+ I + KS
Sbjct: 34 RLVRECNSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAH-KS 92
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
LW +I AY + GH + L+ + + GI+ ++ F VL AC+S + G+++H
Sbjct: 93 I-VLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIH 151
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKP 192
+ G V +ALV MY +CG D +F + D+V W MITA Q P
Sbjct: 152 RCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSP 211
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC---NAFLEDLCIQ 249
EAL +F + Q G+ D VT VSV A L+A V G+ C D+ +
Sbjct: 212 REALEIFYRMLQLGIPPDLVTFVSVFKACSS-SPSLRASQVKGFHACLDETGLGSDVVVA 270
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
++V YARCG ++ AR F M +R+ +SW SM+ + Q G A+ F M
Sbjct: 271 TALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLL-AVETFHAMLLEGVV 329
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P T + C L ++ R + D + ++ YA+C + A +
Sbjct: 330 PTRSTLFAALEGCEDL---RVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRV 386
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F+ E + + +IA Y R + + +E G+ PD I + + L AC+
Sbjct: 387 FSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLA 446
Query: 430 LIDEGRK---CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+ EGR+ C A +L +V +V M G+ G L +A D MP ++ W
Sbjct: 447 ALSEGRQIHACVAADRRL--DRDVTLGNAIVSMYGQCGSLRDARDAFDGMP-ARDEISWN 503
Query: 487 ALLLACRIHGEI 498
A+L A HG +
Sbjct: 504 AMLSASAQHGRV 515
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/680 (34%), Positives = 371/680 (54%), Gaps = 16/680 (2%)
Query: 13 DQLLKSCNFLASLR---QIHSSLTTSGLINQA--LHLGAKIIIKYTTYGEPNTARSLFNS 67
++LLK C + LR IH+ L + ++A + +I Y E AR LF+
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLI 126
+ S W M++ Y N+G E L+L+ +M SG S N + V K+C+++ I
Sbjct: 95 MPERNVVS--WCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
EGK HG ++ G +S +V+ LV MY+ C + +V D++ DL ++ ++ Y
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ +E L + +KT E + +++T +S L D+ A VH + F ++
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+++ MY +CG V A+ VFD +++ +++ Y Q+ EAL LF +M
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ PN T IL+++ L + G HG ++ S + + NA+++MYAK G ++ A
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
F+ + + R++ +WN +I+G HG GR+ALE F +M+ G P+ ITF +L ACS
Sbjct: 393 RKAFSGM--TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 427 HAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H G +++G F M K V+P+++HY C+V +L +AG +A D ++ P+ + W
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
LL AC + G+ A Y + P +G +VL+SNI+A S +W V K+R M N+
Sbjct: 511 RTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNR 570
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK S I F D +P +Y KV+ + +IK GY PD++ A HDV
Sbjct: 571 GVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDV 630
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
++E RE L+YHSEKLAVA+G++ ++ + VTKN+R+C+DCHSA + IS I +R I++
Sbjct: 631 DEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVI 690
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD+NRFHHF G CSC DYW
Sbjct: 691 RDSNRFHHFLDGQCSCCDYW 710
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/625 (36%), Positives = 344/625 (55%), Gaps = 47/625 (7%)
Query: 98 YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY-- 155
YST ++ ++SN F L++C S + I K H +I TG + L+ +
Sbjct: 5 YSTFKKP-LNSNQLQL-FSLESCKSMNQI---KQTHAHLITTGLILHPITANKLLKVLIA 59
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE--QAEKPEEALILFQKTQQEGLLSDSVT 213
+ G ++FD++ D+ + MI A+ I + G L + T
Sbjct: 60 SSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYT 119
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM-- 271
V V A G VL+ + + +AI +L + N+++ MYA G V++AR VFD
Sbjct: 120 FVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSL 179
Query: 272 -----------------------------MEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
M +RD++SW +++ GY+Q G EAL LF E
Sbjct: 180 DQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHE 239
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M + PN T ++AC L + GR H YI S +K++ L +++DMYAKCG+
Sbjct: 240 MLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGE 299
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
+D A +F+D + + V WN +I GY MHG ++A++ F QM E V P+ +TF ++L
Sbjct: 300 IDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALL 359
Query: 423 SACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
+ACSH L++EGR F M + ++PE++HY CMVD+LGR+G L EA + + MP+ P+
Sbjct: 360 NACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPD 419
Query: 482 DSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRED 536
++WGALL ACRIH G+ + +L+ +H G VL++N+Y+AS +W E +R+
Sbjct: 420 ATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQK 479
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCA 596
++ G KK S IE F DR +P K++Y ++ M ++K AGY+P+
Sbjct: 480 IEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEV 539
Query: 597 LHDVED-EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
L D++D ED+E L+ HSEKLA+AFG++N P +++ KNLRVC DCH A +FIS +Y+
Sbjct: 540 LLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYK 599
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R+IIVRD R+HHF+ G CSC DYW
Sbjct: 600 REIIVRDRIRYHHFKDGFCSCKDYW 624
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 234/482 (48%), Gaps = 54/482 (11%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGA--KIIIKYTTYGEPNTARSLFNSIHNDKS 73
L+SC + ++Q H+ L T+GLI + K++I +++G + A LF+ I K
Sbjct: 22 LESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIA-SSFGSLSYAHQLFDQI--PKP 78
Query: 74 YSFLWNTMIRAYA---NNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEG 129
F++NTMI+A+A + H ++ ++ +M R SG N YTF FV KAC + +LEG
Sbjct: 79 DVFIYNTMIKAHAVIPTSSH--NSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEG 136
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV---------------------- 167
+ + I+ G S+ +V A++ MYA G D+ +V
Sbjct: 137 EQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGS 196
Query: 168 ---------FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
FDEMS RD+VSWT +I Y Q +EAL LF + Q G + T+ S
Sbjct: 197 GEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASAL 256
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF--DMMEKRD 276
+A L + + + +H Y + + + S++ MYA+CG ++ A VF + K
Sbjct: 257 AACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK 316
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
+ WN+M+ GY +G++ EA+ LF++M+ PN VT + L++AC++ + GR +
Sbjct: 317 VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFK 376
Query: 337 YIINS-NMKIDATLRNAVMDMYAKCGDLDTA-ENMFNDIHPSERNVSSWNVLIAGYGMHG 394
+ +S ++ + ++D+ + G L A E +FN P + + W L+ +H
Sbjct: 377 SMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFN--MPMAPDATIWGALLGACRIHK 434
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSAC-SHAGLIDEGRKCFADMTKLSVKPEVKHY 453
+ + ++++E + DHI +L+ S +G DE + A K+ V K
Sbjct: 435 DIERG-QRIGKIIKE-LDSDHIGCHVLLANLYSASGQWDEAK---AVRQKIEVSGRKKTP 489
Query: 454 AC 455
C
Sbjct: 490 GC 491
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 329/558 (58%), Gaps = 7/558 (1%)
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+G +H I++ G + V L+++Y+K +VFDE + +W+ +I+A+
Sbjct: 43 QGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFA 102
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q E P AL F++ +G+ D S A G L ++VH A+ + D+
Sbjct: 103 QNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF 162
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ +S+V MYA+CG + AR +FD M +R+++SW+ M+ GY Q EAL LF + D
Sbjct: 163 VGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIED 222
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
N T ++ C+ +LG+ HG + + + + +A++ +Y+KCG ++ A
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F++I P+ RN+ WN ++ H H ++ F +M G+KP+ I+F S+L ACSH
Sbjct: 283 QVFDEI-PT-RNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSH 340
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
AGL+++GR+ F+ M ++PE +HYA +VD+LGRAG L EA +IKQMP+ P +SVWGA
Sbjct: 341 AGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400
Query: 488 LLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL CRIH + A+ + +++ +G VL+SN YAA+ ++ E ++R+ ++++G+
Sbjct: 401 LLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGV 460
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KK S +E G + F DR + W E+Y+K+E + E++ AGY+ D S L V+
Sbjct: 461 KKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDG 520
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
E++ + YHSE+LA+AFG++ P ++V KNLRVC DCH+A +F+S R +IVRD
Sbjct: 521 EEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRD 580
Query: 663 ANRFHHFEGGTCSCNDYW 680
NRFH FE G CSC DYW
Sbjct: 581 NNRFHRFEDGKCSCGDYW 598
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 198/411 (48%), Gaps = 16/411 (3%)
Query: 7 STEGFYDQLLKSCNFLASLR---------QIHSSLTTSGLINQALHLGAKIIIKYTTYGE 57
S E Y Q+ CN L S Q+H+ + GL L + +I Y+
Sbjct: 20 SFEQNYRQI---CNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL-VSHNLINLYSKTQL 75
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
P + +F+ K S W+++I A+A N + L+ + M G+ + + +P
Sbjct: 76 PLFSLQVFD--ETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSAT 133
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
KAC GK VH ++TG+ D +V ++LVDMYAKCG+ D +FDEM R++V
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVV 193
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
SW+ MI Y Q + EAL LF++ E + + T SV + + +HG
Sbjct: 194 SWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLC 253
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
+ +F + ++++++Y++CG +E A VFD + R+L WNSML Q+
Sbjct: 254 LKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVF 313
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
LF+EM N KPN ++ L ++ AC++ G + GR++ + + ++ + +++D+
Sbjct: 314 GLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLL 373
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ G L A ++ + P S W L+ G +H A ++LE
Sbjct: 374 GRAGKLQEAVSVIKQM-PMRPTESVWGALLTGCRIHKDTEMAAFVADRILE 423
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 19/316 (6%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y K+C FL + +H +G +G+ ++ Y GE AR LF+ +
Sbjct: 129 YPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF-VGSSLVDMYAKCGEIGDARHLFDEM 187
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W+ MI YA VE L L+ + N +TF V++ C+S++ +
Sbjct: 188 PERNVVS--WSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLEL 245
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK++HG ++ F S S+V +AL+ +Y+KCG + +VFDE+ R+L W M+ A Q
Sbjct: 246 GKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ 305
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ LF++ G+ + ++ +SV A G V K + + + D I
Sbjct: 306 HAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF------SLMRDYGI 359
Query: 249 QN------SIVAMYARCGNVEKARLVFDMMEKRDLIS-WNSMLTGYIQNGQASEALLLFD 301
+ S+V + R G +++A V M R S W ++LTG + A + D
Sbjct: 360 EPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVAD 419
Query: 302 EMQNSDCKPNPVTALI 317
+ D + + L+
Sbjct: 420 RILEMDSSSSGLHVLL 435
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/671 (33%), Positives = 371/671 (55%), Gaps = 53/671 (7%)
Query: 19 CNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGE--PNTARSLFNSIHNDKSYSF 76
C L +L QIH SG+ + +G I+ + + P R L D +F
Sbjct: 182 CKNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPD---AF 238
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGD 135
++NT++R Y+ + ++ ++ M R G I +S++F FV+KA A+ + G +H
Sbjct: 239 MFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQ 298
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
++ G S +V L+ MY +CG KVFDEM +LV+W ++TA + A
Sbjct: 299 ALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGA 358
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+F K + + N ++A
Sbjct: 359 REIFDKM---------------------------------------LVRNHTSWNVMLAG 379
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y + G +E A+ +F M RD +SW++M+ G+ NG +E+ F E+ ++ +PN V+
Sbjct: 380 YIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSL 439
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++SAC+ G+ + G+ HG++ S ++ NA++DMY++CG++ A +F +
Sbjct: 440 TGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ- 498
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+R++ SW +IAG MHGHG +A+ F++M E GV PD I+F S+L ACSHAGLI EG
Sbjct: 499 EKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGE 558
Query: 436 KCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
F+ M ++ ++P V+HY CMVD+ GR+G L +A+ I QMP+PP VW LL AC
Sbjct: 559 GYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSS 618
Query: 495 HGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
HG I L +L+P ++G VL+SN+YA + KW++V +R+ M + +KK A+S
Sbjct: 619 HGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWS 678
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDVEDEDREHM 608
++E GK + F ++ E ++K++ + + ++ AGY P+++ AL+DVE+E++E
Sbjct: 679 LVEVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGYAPEVASALYDVEEEEKEDQ 738
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
++ HSEKLA+AF + L A +++ KNLR+C DCH+ + S +Y +I++RD NRFH
Sbjct: 739 VSKHSEKLALAFALARLPKGANIRIVKNLRICRDCHAVMKLTSRVYGVEIVIRDRNRFHS 798
Query: 669 FEGGTCSCNDY 679
F+ G+CSC DY
Sbjct: 799 FKDGSCSCGDY 809
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/586 (36%), Positives = 323/586 (55%), Gaps = 43/586 (7%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H + R G + L YA G+ D +F + WT +I +
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGL 108
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E+AL + + +G+ ++ T S++ +L + +A+H A+ F DL ++
Sbjct: 109 HEQALNFYAQMLTQGVEPNAFTF----SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTG 164
Query: 252 IVAMYARCGNV-------------------------------EKARLVFDMMEKRDLISW 280
++ +YAR G+V + AR++FD ME+RD + W
Sbjct: 165 LLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCW 224
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N M+ GY QNG +EAL+LF M + KPN VT L ++SAC LG+ + GR H YI N
Sbjct: 225 NVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN 284
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ ++ + + A++DMY+KCG L+ A +F+ I +++V +WN +I GY MHG ++AL
Sbjct: 285 NGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI--DDKDVVAWNSMIVGYAMHGFSQEAL 342
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDM 459
+ F M G+ P +ITF ILSAC H+G + EG F M + ++P+++HY CMV++
Sbjct: 343 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 402
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYF 514
LGRAG + +A++++K M + P+ +WG LL ACR+HG+IA L ++G +
Sbjct: 403 LGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTY 462
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
+L+SNIYAA W V +LR MK+ G+KK S IE + F +P KE+Y
Sbjct: 463 ILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIY 522
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
+E + +K GY P LHD+ + ++E L HSEKLA+AFG++N P +++
Sbjct: 523 MMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIV 582
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH + IS I RKI+VRD NRFHHF G+CSC DYW
Sbjct: 583 KNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 205/453 (45%), Gaps = 73/453 (16%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L+ ++ L QIH+ L GL + + L K+ Y + G + + +LF N
Sbjct: 36 LIDKSKTISHLLQIHAVLFRHGLDHHPI-LNFKLQRSYASLGRLDYSVALFGRTQNPSV- 93
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
F W +I +A G + L Y+ M G+ N++TF +LK C I GK +H
Sbjct: 94 -FFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHS 148
Query: 135 DIIRTGFLSDSYVQAALVDM-------------------------------YAKCGQTDD 163
++ GF SD YV+ L+D+ YAK G+ D
Sbjct: 149 QAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDA 208
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
+FD M RD V W VMI Y Q P EAL+LF++ + + VT++SV SA GQ
Sbjct: 209 ARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQ 268
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
LG + + VH Y N ++ + ++V MY++CG++E ARLVFD ++ +D+++WNSM
Sbjct: 269 LGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSM 328
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ GY +G + EAL LF M P +T + ++SAC + G G+ I + M
Sbjct: 329 IVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVT-----EGWDIFNKM 383
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
K D + E + + ++ G GH +A E
Sbjct: 384 K---------------------------DEYGIEPKIEHYGCMVNLLGRAGHVEQAYELV 416
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
M ++PD + + ++L AC G I G K
Sbjct: 417 KNM---NIEPDPVLWGTLLGACRLHGKIALGEK 446
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 141/319 (44%), Gaps = 48/319 (15%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y +GE + AR LF+ + ++ WN MI Y NG E L L+ M ++ N
Sbjct: 200 YAKHGELDAARVLFDGM--EERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEV 257
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T VL AC + G+ VH I G + +V ALVDMY+KCG +D VFD++
Sbjct: 258 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI 317
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+D+V+W MI Y +EAL LF+ + GL ++T + + SA G G V +
Sbjct: 318 DDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTE-- 375
Query: 232 AVHGYAICNAFLEDLCIQNSI------VAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
G+ I N ++ I+ I V + R G+VE+A
Sbjct: 376 ---GWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQA-------------------- 412
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
++ ++N + +P+PV L+ AC G LG K +++ N+
Sbjct: 413 --------------YELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLAN 458
Query: 346 DATLRNAVMDMYAKCGDLD 364
T + ++YA G+ D
Sbjct: 459 SGTYI-LLSNIYAAVGNWD 476
>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
Length = 679
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/679 (33%), Positives = 369/679 (54%), Gaps = 50/679 (7%)
Query: 14 QLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
++++SC L +L R+IH + GL +++ +++ Y G AR +F +
Sbjct: 39 RVIQSCARLGALAEGRRIHQLMRRVGL-GSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE-G 129
+S W +I A +G E L L+ M + GI +S +F + AC++ L G
Sbjct: 98 KNVFS--WTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAG 155
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ +H + R GF +LV MY+KCG ++ + F+ M+ + VSW MI A+ +
Sbjct: 156 RALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEH 215
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+ EAL QK EG+ + S D+ +
Sbjct: 216 RRGLEALRTLQKMFLEGIRACS---------------------------------DVVVG 242
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
++V MYA+C + A F +++ ++I+WN +++ Y+Q+ EA+ LF M +
Sbjct: 243 TTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLE 302
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID-ATLRNAVMDMYAKCGDLDTAEN 368
+ VT + ++ AC + + GR H + + + A L N +++MY KCG L AE
Sbjct: 303 MDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEA 362
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA-CSH 427
MF + S+ +V +WN +IA YG HGH +AL F+ M EEGV PD T+ S++ A C++
Sbjct: 363 MFKSM--SQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCAN 420
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL +E F M + V+P HY CMV+ LG+AG L +A +I+ MP P+ W
Sbjct: 421 AGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWT 480
Query: 487 ALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
+ L CR HG+ +AA +++PE + +V ++ I+A + ++E ++R+ M ++G
Sbjct: 481 SFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRG 540
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
++K A S+I+ G + F D+ NP KE++ +++ + E+K AGY PD++ HDVE
Sbjct: 541 IRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHVAHDVE 600
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
+E +L HSE+LA+AFGI++ +P +++ KNLRVC DCH+ + S I RR+IIVR
Sbjct: 601 AGQKEPLLFAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRREIIVR 660
Query: 662 DANRFHHFEGGTCSCNDYW 680
D+NRFHHF+ G+CSC D+W
Sbjct: 661 DSNRFHHFKNGSCSCKDFW 679
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 142/303 (46%), Gaps = 23/303 (7%)
Query: 192 PEEALILFQKTQQEGLLSDSV------------TIVSVASAVGQLGDVLKAQAVHGYAIC 239
P L K QQ G ++ ++ V V + +LG + + + +H
Sbjct: 3 PRRLSTLLSKRQQLGQIAAAIDALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLMRR 62
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
D+ + N +V MY +CG++E+ARLVF+ +++ SW ++T Q+G++ EAL L
Sbjct: 63 VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALAL 122
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQL--GRKFHGYIINSNMKIDATLRNAVMDMY 357
F EM +P+ V+ ++AC+ G L GR H + + +++ MY
Sbjct: 123 FYEMLKQGIQPHSVSFTAAINACS-AGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMY 181
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP--DH 415
+KCG L+ + F + +E N SWN +IA + H G +AL +M EG++ D
Sbjct: 182 SKCGSLEESMRTFESM--TEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSDV 239
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
+ T++++ + + + F + +P + + ++ + C EA ++ ++
Sbjct: 240 VVGTTLVNMYAKCSGLHDANAAFVKLQ----EPNIITWNVLISAYVQHCCFKEAMELFRR 295
Query: 476 MPL 478
M L
Sbjct: 296 MLL 298
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/544 (37%), Positives = 324/544 (59%), Gaps = 16/544 (2%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D+ L+ + CG D +VF M VRD+ SW M++ + EEA +F+
Sbjct: 71 DAVSYNTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMP 130
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+S + + + AS+ GD+ A+ + A D + ++V+ Y GNV+
Sbjct: 131 ARNAVSWNAMVAARASS----GDMGAAENLFRNAPEKT---DAILWTAMVSGYMDTGNVQ 183
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSAC 322
KA F M R+L+SWN+++ GY++N +A +AL +F M +++ +PNP T ++ C
Sbjct: 184 KAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGC 243
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ L + GR+ H + + + T+ +++ MY KCGDLD A +F+++H +++ +
Sbjct: 244 SNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMH--TKDIVA 301
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
WN +I+GY HG GRKA++ F +M +EGV PD IT ++L+AC H GL D G +CF M
Sbjct: 302 WNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQ 361
Query: 443 K-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
+ +++P+V HY+CMVD+L RAG L A +MI MP P+ S +G LL ACR++
Sbjct: 362 EAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFA 421
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
E AA L + +P++ G +V ++NIYA +N+W +V ++R MK+ + K +S +E
Sbjct: 422 EFAARKLIEQDPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGV 481
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
F + DR++P ++ K++ + +K GY PDL ALHDVE+ + ML HSEKL
Sbjct: 482 RHEFRSNDRLHPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKL 541
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
A+AFG+++ +P +++ KNLR+C DCH+A + IS I R+II+RD RFHHF GG CSC
Sbjct: 542 AIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSC 601
Query: 677 NDYW 680
DYW
Sbjct: 602 GDYW 605
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 165/327 (50%), Gaps = 14/327 (4%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WNTM+ + NG +E M R+ + N+ ++ ++ A AS+ + + + +
Sbjct: 106 WNTMVSGLSKNG----AIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAP 161
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+D+ + A+V Y G + F M VR+LVSW ++ Y + + +AL
Sbjct: 162 EK---TDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALR 218
Query: 198 LFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+F+ ++ ++ + T+ SV L + + VH + + + + S+++MY
Sbjct: 219 VFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMY 278
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+CG+++ A +FD M +D+++WN+M++GY Q+G +A+ LF++M++ P+ +T L
Sbjct: 279 CKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLL 338
Query: 317 ILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+++AC + G G + F N++ + ++D+ + G L+ A NM + + P
Sbjct: 339 AVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSM-P 397
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEF 402
E + S++ L+ ++ K LEF
Sbjct: 398 FEPHPSAYGTLLTACRVY----KNLEF 420
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 116/291 (39%), Gaps = 37/291 (12%)
Query: 237 AICNAFLEDLCIQNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
A + L+ N ++A YA+ G + AR +FD + D +S+N++L+ + G
Sbjct: 29 AFASTQLKTTTTYNCLLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDI 88
Query: 294 SEALLLFDEMQNSDCKP---------------------------NPVTALILVSACTYLG 326
A +F M D N V+ +V+A G
Sbjct: 89 DGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSG 148
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
N+ K DA L A++ Y G++ A F + RN+ SWN +
Sbjct: 149 DMGAAENL---FRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAM--PVRNLVSWNAV 203
Query: 387 IAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+AGY + AL F M+E+ V+P+ T +S+L CS+ + GR+ KL
Sbjct: 204 VAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLP 263
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+ + ++ M + G L +A + +M + W A++ HG
Sbjct: 264 LGRSITVGTSLLSMYCKCGDLDDACKLFDEMHT-KDIVAWNAMISGYAQHG 313
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/664 (33%), Positives = 340/664 (51%), Gaps = 85/664 (12%)
Query: 97 LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA 156
L+ +R + + P K+C + L + +H +G D +V ++L+ Y
Sbjct: 7 LHHFLRHVSFPPDPHLLPTAFKSCPTLPL---ARALHAVAEVSGLARDPFVASSLLHAYL 63
Query: 157 KCGQTDDGCKVFDEMS--VRDLVSWTVMITAY---------------------------- 186
+ G T + +FD M R +V W+ ++ A+
Sbjct: 64 RLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVIT 123
Query: 187 --------EQAEKPEEALILFQKTQQEGLLSDSVTIVSVA-SAVGQLGDVLKAQAVHGYA 237
++ + +A++ EGLL T VS A SAVG +G V Q +HGYA
Sbjct: 124 WNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYA 183
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL-------------------- 277
+ D C+ +++ MY +CG + VFD D+
Sbjct: 184 VKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEAL 243
Query: 278 ---------------ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
+SW S++ +QNG+ EA+ F EMQ +PN VT ++ A
Sbjct: 244 RLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAF 303
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ + GR H + + D + +A++DMYAKCG + A +F+ + RNV S
Sbjct: 304 ANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTM--VSRNVVS 361
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM- 441
WN +I GY M+G A+ F ML+ KPD +TFT +L+AC+ AGL +EGR F +M
Sbjct: 362 WNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMH 421
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG----- 496
+ V P ++HYACMV +LGRAG L EA+D+I MP P+ +WG+LL +CR+HG
Sbjct: 422 NEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLA 481
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
E+AA LF LEPE+ G +VL+SNIYA+ W V ++RE MK+ GLKK S IE
Sbjct: 482 EVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNK 541
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ D +P + +K+ + ++++ G++P LHDVE+++++ +L HSEKL
Sbjct: 542 VHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKL 601
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
AVA G+++ +P ++V KNLR+C DCH A +FIS R+I VRD NRFHHF GG CSC
Sbjct: 602 AVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSC 661
Query: 677 NDYW 680
D+W
Sbjct: 662 GDFW 665
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 201/467 (43%), Gaps = 83/467 (17%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
P KSC L R +H+ SGL + + ++ Y G AR+LF
Sbjct: 17 PPDPHLLPTAFKSCPTLPLARALHAVAEVSGLARDPF-VASSLLHAYLRLGTTGNARALF 75
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTF----------- 113
+ + + W+ ++ A+A G L MRR G+ N T+
Sbjct: 76 DGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSG 135
Query: 114 -------------------------PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQ 148
L A L+ G+ +HG ++ G +D+ V
Sbjct: 136 RARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVV 195
Query: 149 AALVDMYAKCGQTDDGCKVFDEMSVRD--------------------------------- 175
AL+DMY KCGQ + +VFDE S D
Sbjct: 196 TALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVE 255
Query: 176 --LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+VSWT ++ Q K EA+ F++ Q +G +SVTI V A + ++ ++
Sbjct: 256 LNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSA 315
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H +A+ FL D+ + +++V MYA+CG V+ AR++FD M R+++SWN+M+ GY G+A
Sbjct: 316 HCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEA 375
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF-----HGYIINSNMKIDAT 348
A+ +F M KP+ VT L++ACT G + GR + + Y ++ M+ A
Sbjct: 376 VNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYAC 435
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ + + + G LD A ++ +D+ P E + W L+ +HG+
Sbjct: 436 M----VTLLGRAGKLDEAYDLISDM-PFEPDAYIWGSLLGSCRVHGN 477
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/537 (38%), Positives = 318/537 (59%), Gaps = 9/537 (1%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
L++ Y + G KVFDEM R L +W MI Q E EE L LF++ G D
Sbjct: 31 LINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPD 90
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
T+ SV S L V Q +HGYAI DL + +S+ MY R G ++ +V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M R+L++WN+++ G QNG L L+ M+ S C+PN +T + ++S+C+ L R
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G++ H I + ++++ MY+KCG L A F++ + + W+ +I+ Y
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE--REDEDEVMWSSMISAY 268
Query: 391 GMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKP 448
G HG G +A++ F+ M E+ ++ + + F ++L ACSH+GL D+G + F M K KP
Sbjct: 269 GFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--GEIAANY---L 503
+KHY C+VD+LGRAGCL +A +IK MP+ P+ +W LL AC IH E+A +
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEI 388
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA 563
+++P + +VL++N++A++ +WR+V ++R+ M++K +KK A S E+ ++ F
Sbjct: 389 LEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMG 448
Query: 564 DRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIM 623
DR KE+Y ++ + +E+K+ GY PD + LHD+++E++E L HSEKLAVAF +M
Sbjct: 449 DRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALM 508
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
L A +++ KNLRVC+DCH AF++IS I R+I +RD +RFHHF G CSC DYW
Sbjct: 509 ILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 173/363 (47%), Gaps = 5/363 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y G+ +AR +F+ + + K + WN MI + E L L+ M G S
Sbjct: 31 LINGYVRAGDLVSARKVFDEMPDRKLTT--WNAMIAGLIQFEYNEEGLSLFREMHGLGFS 88
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ YT V A + G+ +HG I+ G D V ++L MY + G+ DG V
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
M VR+LV+W +I Q PE L L++ + G + +T V+V S+ L
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ Q +H AI + + +S+++MY++CG + A F E D + W+SM++ Y
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 288 IQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKI 345
+GQ EA+ LF+ M + ++ + N V L L+ AC++ G + G + ++ K
Sbjct: 269 GFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
V+D+ + G LD AE + + P + + W L++ +H + A + F +
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIKSM-PIKPDPVIWKTLLSACNIHKNAEMAQKVFKE 387
Query: 406 MLE 408
+LE
Sbjct: 388 ILE 390
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 134/279 (48%), Gaps = 7/279 (2%)
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
S +LGD+ A A++ F+ N ++ Y R G++ AR VFD M R L
Sbjct: 2 SMYSKLGDLPSAVALYERMRKKNFMS----SNILINGYVRAGDLVSARKVFDEMPDRKLT 57
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+WN+M+ G IQ E L LF EM P+ T + S L S +G++ HGY
Sbjct: 58 TWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYA 117
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
I +++D + +++ MY + G L E + + RN+ +WN LI G +G
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM--PVRNLVAWNTLIMGNAQNGCPET 175
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
L + M G +P+ ITF ++LS+CS + +G++ A+ K+ V + ++
Sbjct: 176 VLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS 235
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
M + GCL +A + ++ +W +++ A HG+
Sbjct: 236 MYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQ 273
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/606 (37%), Positives = 337/606 (55%), Gaps = 57/606 (9%)
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK--VFDEMSVRDLVSWTV 181
+L + K VH IIR G SYV L+ M K VF +++ + WT
Sbjct: 53 TLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTA 112
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI-CN 240
MI Y E+ + + +++G+ S T ++ A G ++ + VH I
Sbjct: 113 MIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIG 172
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN------------------- 281
F DL + NS++ +Y +CG + AR VFD M +RD++SW
Sbjct: 173 GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLF 232
Query: 282 ------------SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS-- 327
+M+TGY QNG+ EAL F +MQ+ + + VT ++SAC LG+
Sbjct: 233 DDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVK 292
Query: 328 -----RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
R + + G+ + N+ + + A++DMY+KCG D A +F + ERNV S
Sbjct: 293 HANWIRDIAER-SGFGPSGNVVVGS----ALIDMYSKCGSPDEAYKVFEVM--KERNVFS 345
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
++ +I GY MHG AL+ F ML+ ++P+ +TF ILSACSHAGL+++GR+ FA M
Sbjct: 346 YSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKME 405
Query: 443 KL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG----- 496
K V P HYACMVD+LGRAGCL EA D++K MP+ PN VWGALL ACRIHG
Sbjct: 406 KFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIA 465
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK- 555
+IAAN LF+LEP G ++L+SNIYA++ +W EV KLR+ ++ KG KK S E GK
Sbjct: 466 QIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE-GKN 524
Query: 556 -DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+I F D +P E+ + ++ + ++ GY P+L A +D+ D+++E +L HSE
Sbjct: 525 GEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSE 584
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+A+G++ +++ KN+R+C DCH+ S I R+IIVRD RFHHF GTC
Sbjct: 585 KLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTC 644
Query: 675 SCNDYW 680
SC ++W
Sbjct: 645 SCGNFW 650
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 212/416 (50%), Gaps = 37/416 (8%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
+L C + ++Q+H+ + +GL +Q ++ K+I T P + L +
Sbjct: 48 ILHDCTLFSQIKQVHAHIIRNGL-SQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPN 106
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
FLW MIR YA G E+ Y+ MRR G+ S+TF + KAC + + GK VH
Sbjct: 107 PFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHA 166
Query: 135 D-IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS--------------- 178
I+ GF SD YV +++D+Y KCG KVFDEMS RD+VS
Sbjct: 167 QTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDME 226
Query: 179 ----------------WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
WT M+T Y Q +P+EAL FQK Q G+ +D VT+ V SA
Sbjct: 227 SASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACA 286
Query: 223 QLGDVLKAQAVHGYAICNAFLE--DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
QLG V A + A + F ++ + ++++ MY++CG+ ++A VF++M++R++ S+
Sbjct: 287 QLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSY 346
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
+SM+ GY +G+A AL LF +M ++ +PN VT + ++SAC++ G + GR+ +
Sbjct: 347 SSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEK 406
Query: 341 SNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ A M D+ + G L+ A ++ + P E N W L+ +HG+
Sbjct: 407 FFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTM-PMEPNGGVWGALLGACRIHGN 461
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 10/196 (5%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G+ +I Y+ G P+ A +F + +S+ ++MI YA +G L+L+ M +
Sbjct: 314 VGSALIDMYSKCGSPDEAYKVFEVMKERNVFSY--SSMILGYAMHGRAHSALQLFHDMLK 371
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR-TGFLSDSYVQAALVDMYAKCGQTD 162
+ I N TF +L AC+ L+ +G+ + + + G A +VD+ + G +
Sbjct: 372 TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLE 431
Query: 163 DGCKVFDEMSVR-DLVSWTVMITAYEQAEKPEEALI----LFQKTQQEGLLSDSVTIVSV 217
+ + M + + W ++ A P+ A I LF K + G + + + + ++
Sbjct: 432 EALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELF-KLEPNG-IGNYILLSNI 489
Query: 218 ASAVGQLGDVLKAQAV 233
++ G+ +V K + V
Sbjct: 490 YASAGRWEEVSKLRKV 505
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/606 (37%), Positives = 337/606 (55%), Gaps = 57/606 (9%)
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK--VFDEMSVRDLVSWTV 181
+L + K VH IIR G SYV L+ M K VF +++ + WT
Sbjct: 53 TLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTA 112
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI-CN 240
MI Y E+ + + +++G+ S T ++ A G ++ + VH I
Sbjct: 113 MIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIG 172
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN------------------- 281
F DL + NS++ +Y +CG + AR VFD M +RD++SW
Sbjct: 173 GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLF 232
Query: 282 ------------SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS-- 327
+M+TGY QNG+ EAL F +MQ+ + + VT ++SAC LG+
Sbjct: 233 DDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVK 292
Query: 328 -----RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
R + + G+ + N+ + + A++DMY+KCG D A +F + ERNV S
Sbjct: 293 HANWIRDIAER-SGFGPSGNVVVGS----ALIDMYSKCGSPDEAYKVFEVM--KERNVFS 345
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
++ +I GY MHG AL+ F ML+ ++P+ +TF ILSACSHAGL+++GR+ FA M
Sbjct: 346 YSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKME 405
Query: 443 KL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG----- 496
K V P HYACMVD+LGRAGCL EA D++K MP+ PN VWGALL ACRIHG
Sbjct: 406 KFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIA 465
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK- 555
+IAAN LF+LEP G ++L+SNIYA++ +W EV KLR+ ++ KG KK S E GK
Sbjct: 466 QIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE-GKN 524
Query: 556 -DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+I F D +P E+ + ++ + ++ GY P+L A +D+ D+++E +L HSE
Sbjct: 525 GEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSE 584
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+A+G++ +++ KN+R+C DCH+ S I R+IIVRD RFHHF GTC
Sbjct: 585 KLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTC 644
Query: 675 SCNDYW 680
SC ++W
Sbjct: 645 SCGNFW 650
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 212/416 (50%), Gaps = 37/416 (8%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
+L C + ++Q+H+ + +GL +Q ++ K+I T P + L +
Sbjct: 48 ILHDCTLFSQIKQVHAHIIRNGL-SQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPN 106
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
FLW MIR YA G E+ Y+ MRR G+ S+TF + KAC + + GK VH
Sbjct: 107 PFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHA 166
Query: 135 D-IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS--------------- 178
I+ GF SD YV +++D+Y KCG KVFDEMS RD+VS
Sbjct: 167 QTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDME 226
Query: 179 ----------------WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
WT M+T Y Q +P+EAL FQK Q G+ +D VT+ V SA
Sbjct: 227 SASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACA 286
Query: 223 QLGDVLKAQAVHGYAICNAFLE--DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
QLG V A + A + F ++ + ++++ MY++CG+ ++A VF++M++R++ S+
Sbjct: 287 QLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSY 346
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
+SM+ GY +G+A AL LF +M ++ +PN VT + ++SAC++ G + GR+ +
Sbjct: 347 SSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEK 406
Query: 341 SNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ A M D+ + G L+ A ++ + P E N W L+ +HG+
Sbjct: 407 FFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTM-PMEPNGGVWGALLGACRIHGN 461
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/511 (40%), Positives = 304/511 (59%), Gaps = 9/511 (1%)
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT +I AY A EA+ + ++ G+ DS T V V +A ++ D+ +AV
Sbjct: 7 VSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWAA 66
Query: 237 AICN-AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
A E + + + + +Y +CG +EKAR VFD M+ RD ++W +M+ GY NG E
Sbjct: 67 ARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPRE 126
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL LF MQ KP+ T + +SACT LG+ LGR+ G + + + L A++D
Sbjct: 127 ALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALID 186
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAKCG A +F + ER++ WN +I G GM GH + A QM + GVK +
Sbjct: 187 MYAKCGSTSEAWMVFQQM--LERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLND 244
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
TF +L +C+H GL+++GR+ F +MT + + P ++HY CMVD+ RAG L EA +I
Sbjct: 245 NTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIG 304
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
MP+ N VWGALL C+IH E A L +LEP ++G +V++SNIY+ S +W +
Sbjct: 305 DMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRWED 364
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
KLR +MK KG++K A S +E + F+ D +P ++Y K++ + +E+K GY
Sbjct: 365 AAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMKAMGY 424
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
P + DVE+E++E+ L +HSEK+A+AF ++ P ++VTKNLRVC DCHSA +
Sbjct: 425 EPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHSAIKL 484
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS I R+I+VRD NRFH F G CSCNDYW
Sbjct: 485 ISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 177/355 (49%), Gaps = 15/355 (4%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W +I AY + GH +E + + SG+ +S+T VL ACA + + G+ V
Sbjct: 9 WTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAVWAAAR 68
Query: 138 RTGFLSDS-YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ +++S +V A +D+Y KCG+ + VFDEM RD V+W M+ Y P EAL
Sbjct: 69 QEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREAL 128
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDV-LKAQAVHGYAICNAFLEDLCIQNSIVAM 255
LF Q EG D T+V SA +LG + L QAV G + L + + +++ M
Sbjct: 129 DLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAV-GMVHWDEVLGNPVLGTALIDM 187
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
YA+CG+ +A +VF M +RD+I WN+M+ G G A L +M+ S K N T
Sbjct: 188 YAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTF 247
Query: 316 LILVSACTYLGSRQLGRKF-----HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ L+ +CT+ G GR++ H Y I+ ++ ++D++++ G L+ A +
Sbjct: 248 IGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIE----HYGCMVDLFSRAGLLEEAHQLI 303
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM--LEEGVKPDHITFTSILS 423
D+ P N W L+ G +H + A Q+ LE +++ ++I S
Sbjct: 304 GDM-PMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYS 357
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
LG +I Y G + A +F + +WN MI GH L M++
Sbjct: 180 LGTALIDMYAKCGSTSEAWMVFQQMLERDI--IVWNAMILGLGMTGHEKIAFALVGQMKK 237
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQ-AALVDMYAKCGQTD 162
SG+ N TF +L +C L+ +G+ ++ +S +VD++++ G +
Sbjct: 238 SGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLE 297
Query: 163 DGCKVFDEMS-VRDLVSWTVMITA---YEQAEKPEEAL 196
+ ++ +M + + V W ++ + A+ E AL
Sbjct: 298 EAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHAL 335
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 328/558 (58%), Gaps = 7/558 (1%)
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+G +H I++ G + V L+++Y+K +VFDE + +W+ +I+A+
Sbjct: 43 QGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFA 102
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q E P AL F++ +G+ D S A G L ++VH A+ + D+
Sbjct: 103 QNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF 162
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ +S+V MYA+CG + AR +FD M +R+++SW+ M+ GY Q EAL LF + D
Sbjct: 163 VGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIED 222
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
N T ++ C+ +LG+ HG + + + + +A++ +Y+KCG ++ A
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F++I P+ RN+ WN ++ H H ++ F +M G+KP+ I F S+L ACSH
Sbjct: 283 QVFDEI-PT-RNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSH 340
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
AGL+++GR+ F+ M ++PE +HYA +VD+LGRAG L EA +IKQMP+ P +SVWGA
Sbjct: 341 AGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGA 400
Query: 488 LLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL CRIH + A+ + +++ +G VL+SN YAA+ ++ E ++R+ ++++G+
Sbjct: 401 LLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGV 460
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KK S +E G + F DR + W E+Y+K+E + E++ AGY+ D S L V+
Sbjct: 461 KKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDG 520
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
E++ + YHSE+LA+AFG++ P ++V KNLRVC DCH+A +F+S R +IVRD
Sbjct: 521 EEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRD 580
Query: 663 ANRFHHFEGGTCSCNDYW 680
NRFH FE G CSC DYW
Sbjct: 581 NNRFHRFEDGKCSCGDYW 598
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 197/411 (47%), Gaps = 16/411 (3%)
Query: 7 STEGFYDQLLKSCNFLASLR---------QIHSSLTTSGLINQALHLGAKIIIKYTTYGE 57
S E Y Q+ CN L S Q+H+ + GL L + +I Y+
Sbjct: 20 SFEQNYRQI---CNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPL-VSHNLINLYSKTQL 75
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
P + +F+ K S W+++I A+A N + L+ + M G+ + + +P
Sbjct: 76 PLFSLQVFD--ETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSAT 133
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
KAC GK VH ++TG+ D +V ++LVDMYAKCG+ D +FDEM R++V
Sbjct: 134 KACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVV 193
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
SW+ MI Y Q + EAL LF++ E + + T SV + + +HG
Sbjct: 194 SWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLC 253
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
+ +F + ++++++Y++CG +E A VFD + R+L WNSML Q+
Sbjct: 254 LKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVF 313
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
LF+EM N KPN + L ++ AC++ G + GR++ + + ++ + +++D+
Sbjct: 314 GLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLL 373
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ G L A ++ + P S W L+ G +H A ++LE
Sbjct: 374 GRAGKLQEAVSVIKQM-PMRPTESVWGALLTGCRIHKDTEMAAFVADRILE 423
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 141/316 (44%), Gaps = 19/316 (6%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y K+C FL + +H +G +G+ ++ Y GE AR LF+ +
Sbjct: 129 YPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVF-VGSSLVDMYAKCGEIGDARHLFDEM 187
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W+ MI YA VE L L+ + N +TF V++ C+S++ +
Sbjct: 188 PERNVVS--WSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLEL 245
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK++HG ++ F S S+V +AL+ +Y+KCG + +VFDE+ R+L W M+ A Q
Sbjct: 246 GKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ 305
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ LF++ G+ + + +SV A G V K + + + D I
Sbjct: 306 HAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYF------SLMRDYGI 359
Query: 249 QN------SIVAMYARCGNVEKARLVFDMMEKRDLIS-WNSMLTGYIQNGQASEALLLFD 301
+ S+V + R G +++A V M R S W ++LTG + A + D
Sbjct: 360 EPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVAD 419
Query: 302 EMQNSDCKPNPVTALI 317
+ D + + L+
Sbjct: 420 RILEMDSSSSGLHVLL 435
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 243/716 (33%), Positives = 368/716 (51%), Gaps = 92/716 (12%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ G A LFN+ + +N MI A++++ L+L+ M+R G + +
Sbjct: 72 YSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPF 131
Query: 112 TFPFVLKACASNSLILEGKV----VHGDIIRTGFLSDSYVQAALVDMYAKCGQTD--DGC 165
TF VL A SLI + + +H ++ + G LS V AL+ Y C + + C
Sbjct: 132 TFSSVLGAL---SLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSC 188
Query: 166 -------KVFDE------------------------MSVRDL---------VSWTVMITA 185
K+FDE ++ R+L V+W MI+
Sbjct: 189 VLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISG 248
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Y EEA L ++ G+ D T SV SA G + VH Y +
Sbjct: 249 YVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPS 308
Query: 246 ----LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI------------- 288
L + N+++ +Y RCG + +AR VFD M +DL+SWN++L+G +
Sbjct: 309 GHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFR 368
Query: 289 ------------------QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
QNG E L LF++M+ +P +++C+ LGS
Sbjct: 369 EMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDN 428
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G++ H II ++ NA++ MY++CG ++ A+ +F + P +VS WN +IA
Sbjct: 429 GQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTM-PYVDSVS-WNAMIAAL 486
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPE 449
HGHG +A++ + +ML+E + PD ITF +ILSACSHAGL+ EGR F M + PE
Sbjct: 487 AQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPE 546
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLF 504
HY+ ++D+L RAG EA ++ + MP P +W ALL C IHG + AA+ L
Sbjct: 547 EDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLL 606
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
+L P+ G ++ +SN+YAA +W EV ++R+ M+ +G+KK S IE + F D
Sbjct: 607 ELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDD 666
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
V+P VY+ +E + E++ GY+PD LHD+E E +E+ L+ HSEKLAV +GIM
Sbjct: 667 AVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMK 726
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
L A ++V KNLR+C DCH+AF++IS + R+IIVRD RFHHF G CSC++YW
Sbjct: 727 LPLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 208/471 (44%), Gaps = 43/471 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L+ SC +A+ R++ A II Y + AR L + + +
Sbjct: 184 LVNSCVLMAAARKLFDEAPPGRRDEPAW---TTIIAGYVRNDDLVAARELLEGMTDHIAV 240
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+ WN MI Y + G E +L M GI + YT+ V+ A ++ L G+ VH
Sbjct: 241 A--WNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHA 298
Query: 135 DIIRTGFLSDSY----VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS------------ 178
++RT + V AL+ +Y +CG+ + +VFD+M V+DLVS
Sbjct: 299 YVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNAR 358
Query: 179 -------------------WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
WTVMI+ Q EE L LF + + EGL +
Sbjct: 359 RIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIA 418
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
+ LG + Q +H I L + N+++ MY+RCG VE A VF M D +S
Sbjct: 419 SCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVS 478
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI- 338
WN+M+ Q+G +A+ L+++M D P+ +T L ++SAC++ G + GR + +
Sbjct: 479 WNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMR 538
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ + + + ++D+ + G A+N+ + P E W L+AG +HG+
Sbjct: 539 VCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESM-PFEPGAPIWEALLAGCWIHGNMEL 597
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
++ ++LE + D T+ S+ + + G DE + M + VK E
Sbjct: 598 GIQAADRLLELMPQQDG-TYISLSNMYAALGQWDEVARVRKLMRERGVKKE 647
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 184/432 (42%), Gaps = 81/432 (18%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFD--EMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D ++ Y+ G ++F+ MS+RD VS+ MITA+ + AL LF +
Sbjct: 61 DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGD-----------VLKAQAVHGYAICNAFL------- 243
++ G + D T SV A+ + D V K A+ ++ NA +
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 244 -------------------------EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
D +I+A Y R ++ AR + + M +
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAV 240
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+WN+M++GY+ G EA L M + + + T ++SA + G +GR+ H Y+
Sbjct: 241 AWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYV 300
Query: 339 INSNMKIDA----TLRNAVMDMYAKCGDLDTAENMFNDIHPSE----------------- 377
+ + ++ ++ NA++ +Y +CG L A +F+ + +
Sbjct: 301 LRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRI 360
Query: 378 ------------RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
R++ +W V+I+G +G G + L+ F+QM EG++P + +++C
Sbjct: 361 EEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASC 420
Query: 426 SHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV- 484
S G +D G++ + + +L + ++ M R G L EA D + + +P DSV
Sbjct: 421 SVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCG-LVEAADTVF-LTMPYVDSVS 478
Query: 485 WGALLLACRIHG 496
W A++ A HG
Sbjct: 479 WNAMIAALAQHG 490
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 168/407 (41%), Gaps = 89/407 (21%)
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEK------ 274
+ QL A+AVH + + + F I N ++ Y + N+ AR +FD + K
Sbjct: 6 LAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAA 65
Query: 275 ---------------------------RDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
RD +S+N+M+T + + AL LF +M+
Sbjct: 66 TTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLG 125
Query: 308 CKPNPVTALILVSACTYLGSRQLG-RKFHGYIINSNMKIDATLRNAVMDMYAKCGD---- 362
P+P T ++ A + + + ++ H + ++ NA+M Y C
Sbjct: 126 FVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLV 185
Query: 363 -----LDTAENMFNDIHPSERNVSSWNVLIAGY--------------GM----------- 392
+ A +F++ P R+ +W +IAGY GM
Sbjct: 186 NSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAM 245
Query: 393 ------HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
G +A + +M G++ D T+TS++SA S+AGL + GR+ A + + V
Sbjct: 246 ISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVV 305
Query: 447 KPEVKHYA-----CMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEI-A 499
+P H+ ++ + R G L EA + +MP+ D V W A+L C I
Sbjct: 306 QPS-GHFVLSVNNALITLYTRCGKLVEARRVFDKMPV--KDLVSWNAILSGCVNARRIEE 362
Query: 500 ANYLFQLEPEHT--GYFVLMSNIYAASNKWREVG-KLREDMKNKGLK 543
AN +F+ P + + V++S + A N + E G KL MK +GL+
Sbjct: 363 ANSIFREMPVRSLLTWTVMISGL--AQNGFGEEGLKLFNQMKLEGLE 407
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 9/165 (5%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y + SC+ L SL +Q+HS + G + +L +G +I Y+ G A ++F ++
Sbjct: 413 YAGAIASCSVLGSLDNGQQLHSQIIQLGH-DSSLSVGNALITMYSRCGLVEAADTVFLTM 471
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S S WN MI A A +GH V+ ++LY M + I + TF +L AC+ L+ E
Sbjct: 472 PYVDSVS--WNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKE 529
Query: 129 GKVVHGDIIRT--GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
G+ + D +R G + + L+D+ + G + V + M
Sbjct: 530 GR-HYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESM 573
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/609 (34%), Positives = 344/609 (56%), Gaps = 13/609 (2%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
NT++ +Y + +L+ M +S+TF VL A I+ G+ +H +I+
Sbjct: 183 NTLVDSYCKSNRLDLACQLFKEMPEI----DSFTFAAVLCANIGLDDIVLGQQIHSFVIK 238
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
T F+ + +V AL+D Y+K D K+FDEM +D VS+ V+I+ Y K + A L
Sbjct: 239 TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDL 298
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F++ Q ++ S D + +H I ++ + NS+V MYA+
Sbjct: 299 FRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAK 358
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG E+A ++F + R + W +M++ Y+Q G E L LF++M+ + + T L
Sbjct: 359 CGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 418
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ A + S LG++ H +II S + +A++D+YAKCG + A F ++ +R
Sbjct: 419 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM--PDR 476
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
N+ SWN +I+ Y +G L+ F +M+ G++PD ++F +LSACSH+GL++EG F
Sbjct: 477 NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 536
Query: 439 ADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-- 495
MT++ + P +HYA +VDML R+G EA ++ +MP+ P++ +W ++L ACRIH
Sbjct: 537 NSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKN 596
Query: 496 ---GEIAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
AA+ LF +E +V MSNIYAA+ +W V K+ + M+++G+KK A+S +
Sbjct: 597 QELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWV 656
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E + F DR +P +E+ KK++ + ++ GY PD SCALH+ +++ + L Y
Sbjct: 657 EIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKY 716
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSE+LA+AF +++ + + V KNLR C DCH+A + IS I R+I VRD+ RFHHF
Sbjct: 717 HSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRD 776
Query: 672 GTCSCNDYW 680
G CSC D+W
Sbjct: 777 GFCSCGDFW 785
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 218/480 (45%), Gaps = 51/480 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y G AR LF+ + + + W +I Y+ E EL+ M+R G
Sbjct: 84 MISGYVKSGNLGEARKLFDGMVERTAVT--WTILIGGYSQLNQFKEAFELFVQMQRCGTE 141
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ TF +L C + + + V II+ G+ S V LVD Y K + D C++
Sbjct: 142 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 201
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F EM PE DS T +V A L D+
Sbjct: 202 FKEM--------------------PE---------------IDSFTFAAVLCANIGLDDI 226
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ Q +H + I F+ ++ + N+++ Y++ +V AR +FD M ++D +S+N +++GY
Sbjct: 227 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY 286
Query: 288 IQNGQASEALLLFDEMQNS--DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+G+ A LF E+Q + D K P ++ +++ T ++GR+ H I +
Sbjct: 287 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTL--DWEMGRQIHAQTIVTTADS 344
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ + N+++DMYAKCG + AE +F ++ + R+ W +I+ Y G + L+ F++
Sbjct: 345 EILVGNSLVDMYAKCGKFEEAEMIFTNL--THRSAVPWTAMISAYVQKGFYEEGLQLFNK 402
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M + V D TF S+L A + + G++ + + K V + ++D+ + G
Sbjct: 403 MRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGS 462
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANY-------LFQLEPEHTGYFVLMS 518
+ +A ++MP N W A++ A +GE A L L+P+ + ++S
Sbjct: 463 IKDAVQTFQEMP-DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 521
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 219/443 (49%), Gaps = 20/443 (4%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+QIHS + + + + ++ Y+ + AR LF+ + S+ N +I Y
Sbjct: 230 QQIHSFVIKTNFVWNVF-VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSY--NVIISGY 286
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE-GKVVHGDIIRTGFLSD 144
A +G +L+ ++ + + F +L + ASN+L E G+ +H I T S+
Sbjct: 287 AWDGKHKYAFDLFRELQFTAFDRKQFPFATML-SIASNTLDWEMGRQIHAQTIVTTADSE 345
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
V +LVDMYAKCG+ ++ +F ++ R V WT MI+AY Q EE L LF K +Q
Sbjct: 346 ILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQ 405
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+++D T S+ A + + + +H + I + F+ ++ ++++ +YA+CG+++
Sbjct: 406 ASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKD 465
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A F M R+++SWN+M++ Y QNG+A L F EM S +P+ V+ L ++SAC++
Sbjct: 466 AVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSH 525
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
G + G +H + K+D + +V+DM + G + AE + ++ P + +
Sbjct: 526 SGLVEEGL-WHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEM-PIDPDEIM 583
Query: 383 WNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFTSILSACS--------HAGLI 431
W+ ++ +H + R+A + M E ++ ++I +A H +
Sbjct: 584 WSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMR 643
Query: 432 DEGRKCFADMTKLSVKPEVKHYA 454
D G K + + +K E ++
Sbjct: 644 DRGVKKLPAYSWVEIKHETHMFS 666
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 327 SRQLGRKF-HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+RQL K H +++NM I Y K G+L A +F+ + ER +W +
Sbjct: 66 ARQLFEKMPHKNTVSTNMMISG---------YVKSGNLGEARKLFDGM--VERTAVTWTI 114
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
LI GY ++A E F QM G +PD++TF ++LS C+ + ++ + + KL
Sbjct: 115 LIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLG 174
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ +VD ++ L A + K+MP
Sbjct: 175 YDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 206
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N +++ Y + GN+ +AR +FD M +R ++W ++ GY Q Q EA LF +MQ +
Sbjct: 82 NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 141
Query: 310 PNPVTALILVSACTYLGSRQLGRKF---HGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
P+ VT + L+S C ++G + II + N ++D Y K LD A
Sbjct: 142 PDYVTFVTLLSGC---NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA 198
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGM 392
+F ++ P + + VL A G+
Sbjct: 199 CQLFKEM-PEIDSFTFAAVLCANIGL 223
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/442 (42%), Positives = 287/442 (64%), Gaps = 8/442 (1%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+L + ++++ Y+R G VE ARL+FD ME++DL+ W++M++GY ++ + EAL LF EMQ
Sbjct: 13 NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQ 72
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
KP+ VT L ++SAC LG + H Y+ + + + NA++DMYAKCG+L
Sbjct: 73 VFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLG 132
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
A +F + RNV SW +I + +HG AL+FF QM +E +KP+ +TF +L A
Sbjct: 133 AARGVFEKMQS--RNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYA 190
Query: 425 CSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CSHAGL++EGR+ FA MT + ++ P+ +HY CMVD+ GRA L +A ++++ MPL PN
Sbjct: 191 CSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVV 250
Query: 484 VWGALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
+WG+L+ AC+IHGE AA + +LEP+H G V +SNIYA +W++VG+LR MK
Sbjct: 251 IWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMK 310
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
+G+ K S IE + F AD+ + ++Y+K++ + E+K+ GY P+ L
Sbjct: 311 QRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLV 370
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
DVE+E ++ ++ +HSEKLA+ +G+M + +++ KNLRVC DCH+ + +S +Y +I
Sbjct: 371 DVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEI 430
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
IVRD RFHH++ G CSCNDYW
Sbjct: 431 IVRDRTRFHHYKAGVCSCNDYW 452
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 154/270 (57%), Gaps = 4/270 (1%)
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V A++ Y++ G+ +D +FD+M +DLV W+ MI+ Y +++KP+EAL LF + Q G
Sbjct: 16 VLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFG 75
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ D VTI+SV SA +LG + +A+ +H Y N L + N+++ MYA+CGN+ AR
Sbjct: 76 IKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAAR 135
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VF+ M+ R++ISW SM+ + +G AS AL F +M++ + KPN VT + ++ AC++ G
Sbjct: 136 GVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAG 195
Query: 327 SRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ GR+ + N N+ ++D++ + L A + + P NV W
Sbjct: 196 LVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETM-PLAPNVVIWGS 254
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
L+A +HG Q+LE ++PDH
Sbjct: 255 LMAACQIHGENELGEFAAKQVLE--LEPDH 282
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y+ G AR +F+ + ++ W+ MI YA + E L L+S M+ GI
Sbjct: 20 MISGYSRVGRVEDARLIFDQM--EEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIK 77
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ T V+ ACA ++ K +H + + G V AL+DMYAKCG V
Sbjct: 78 PDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNLGAARGV 137
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F++M R+++SWT MI A+ AL F + + E + + VT V V A G V
Sbjct: 138 FEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLV 197
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ +C L L + IH + +GL AL + +I Y G AR +F + +
Sbjct: 86 VISACARLGVLDRAKWIHMYVDKNGL-GGALPVNNALIDMYAKCGNLGAARGVFEKMQSR 144
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W +MI A+A +G L+ + M+ I N TF VL AC+ L+ EG+
Sbjct: 145 NVIS--WTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRR 202
Query: 132 VHGDIIRTGFLSDSYVQ-AALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA 185
+ ++ + +VD++ + D ++ + M + ++V W ++ A
Sbjct: 203 TFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAA 258
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/602 (36%), Positives = 339/602 (56%), Gaps = 40/602 (6%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
++ AC + + GK VH + F+ + L+ MYAKCG D +FDE+ +D
Sbjct: 69 LIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKD 128
Query: 176 LVSWTVMITAY------EQAEK-----PE--------------------EALILFQKTQQ 204
L SW MI+ Y EQA K P EAL LF+ Q+
Sbjct: 129 LCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQE 188
Query: 205 -EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
E + T+ S +A + + + + +HGY I + D + +++ +Y +CG++
Sbjct: 189 NESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLN 248
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+AR +FD M +D++SW +M+ ++G+ E LF ++ S +PN T +++AC
Sbjct: 249 EARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACA 308
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + Q+G++ HGY+ + +A++ +Y+KCG+ +TA +FN + ++ SW
Sbjct: 309 DLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQM--PRPDLVSW 366
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT- 442
LI GY +G AL+FF +L G KPD ITF +LSAC+HAGL+D G + F +
Sbjct: 367 TSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKE 426
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI---- 498
K + HYAC++D+L R+G EA ++I MP+ P+ +W +LL CRIHG I
Sbjct: 427 KHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAE 486
Query: 499 -AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA LF+LEPE+ ++ +SNIYA + W E K+R DM N+G+ K S IE + +
Sbjct: 487 RAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQV 546
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D +P ++++ + ++ ++K GY+ D + LHDVE+E +E + YHSEKLA
Sbjct: 547 HVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYHSEKLA 606
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VAFGI++ +P ++V KNLR C DCH+A ++IS I +RKIIVRD+NRFH F G+CSC
Sbjct: 607 VAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDGSCSCK 666
Query: 678 DY 679
DY
Sbjct: 667 DY 668
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 206/397 (51%), Gaps = 8/397 (2%)
Query: 48 IIIKYTTYGEPNTARSLFNSI-HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI 106
+I Y G AR LF+ + H D +F WN +I Y + G +E L+L+ M+ +
Sbjct: 135 MISGYANVGRIEQARKLFDEMPHRD---NFSWNAVISGYVSQGWYMEALDLFRMMQENES 191
Query: 107 SS-NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
S+ N +T L A A+ S + GK +HG +IR+G D V AL+D+Y KCG ++
Sbjct: 192 SNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEAR 251
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+FD+M+ +D+VSWT MI + + +E LF+ G+ + T V +A L
Sbjct: 252 GIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLA 311
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ VHGY + +++V +Y++CGN E AR VF+ M + DL+SW S++
Sbjct: 312 AEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIV 371
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMK 344
GY QNGQ AL F+ + S KP+ +T + ++SACT+ G +G + FH +
Sbjct: 372 GYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLV 431
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
A V+D+ A+ G AEN+ +++ P + + W L+ G +HG+ A E +
Sbjct: 432 HTADHYACVIDLLARSGRFKEAENIIDNM-PMKPDKFLWASLLGGCRIHGNIELA-ERAA 489
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
+ L E + T+ ++ + ++AGL E K DM
Sbjct: 490 KALFELEPENPATYITLSNIYANAGLWTEETKVRNDM 526
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 5/263 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++IH L SGL + + ++ Y G N AR +F+ + + S W TMI
Sbjct: 216 KEIHGYLIRSGLELDEV-VWTALLDLYGKCGSLNEARGIFDQMADKDIVS--WTTMIHRC 272
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+G E L+ + SG+ N YTF VL ACA + GK VHG + R G+ S
Sbjct: 273 FEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFS 332
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ +ALV +Y+KCG T+ +VF++M DLVSWT +I Y Q +P+ AL F+ +
Sbjct: 333 FAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRS 392
Query: 206 GLLSDSVTIVSVASAVGQLGDV-LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G D +T V V SA G V + + H + + ++ + AR G ++
Sbjct: 393 GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKE 452
Query: 265 ARLVFDMME-KRDLISWNSMLTG 286
A + D M K D W S+L G
Sbjct: 453 AENIIDNMPMKPDKFLWASLLGG 475
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+P+P L++AC +LG++ H + SN + N ++ MYAKCG L A+
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F++I ++++ SWN +I+GY G +A + F +M D+ ++ +++S
Sbjct: 120 LFDEI--PQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQ 173
Query: 429 GLIDEGRKCFADMTK 443
G E F M +
Sbjct: 174 GWYMEALDLFRMMQE 188
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 337/608 (55%), Gaps = 42/608 (6%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
F L+ CA +H II+ GF S + L+D+Y KCG ++FDEM
Sbjct: 6 FLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMP 65
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKT-QQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
RD VSW ++TA+ +A P L + +GL D + A LG + +
Sbjct: 66 NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGK 125
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
VH + + F +D +++S++ MY +CG ++AR VFD + ++ +SW SM++GY ++G
Sbjct: 126 QVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSG 185
Query: 292 QASEAL-------------------------------LLFDEMQNSDCK-PNPVTALILV 319
+ EA+ LF+EM+ +P+ +V
Sbjct: 186 RKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVV 245
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
C L +LG++ HG +I + + NA++DMYAKC D+ A+++F + ++
Sbjct: 246 GGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRM--PRKD 303
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V SW +I G HG +AL + +M+ +KP+ +TF +L ACSHAGL+ GR+ F
Sbjct: 304 VISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFR 363
Query: 440 DMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI 498
MT S+ P ++HY C++D+L R+G L EA +++ ++P P++ W +LL AC H +
Sbjct: 364 SMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNL 423
Query: 499 A-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
A+ + L+PE ++L+SN+YA + W V K+R+ M + ++K +S I++
Sbjct: 424 EMGVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDF 483
Query: 554 GKDIQGFHTADRVN-PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYH 612
GKD Q FH + + P E+ ++ + E++ GY+P+ S L+D+E +++E L +H
Sbjct: 484 GKDSQVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWH 543
Query: 613 SEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
SE+LAVA+G++ P ++++ KNLR+C DCH+ +FIS I +R+I+VRDA R+HHF+ G
Sbjct: 544 SERLAVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEG 603
Query: 673 TCSCNDYW 680
CSCND+W
Sbjct: 604 KCSCNDFW 611
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 226/454 (49%), Gaps = 46/454 (10%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
++HS + +G +L L ++ Y G A LF+ + N S W +++ A+
Sbjct: 24 ELHSQIIKAGFDKSSL-LSNTLLDVYGKCGLIPQALQLFDEMPNRDHVS--WASILTAHN 80
Query: 87 NNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
TL + +TM G+ + + F +++AC+S + GK VH + + F D
Sbjct: 81 KALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDE 140
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL--------- 196
V+++L+DMY KCGQ D+ VFD + ++ VSWT MI+ Y ++ + EA+
Sbjct: 141 VVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVR 200
Query: 197 ----------------------ILFQKTQQEGL-LSDSVTIVSVASAVGQLGDVLKAQAV 233
LF + ++EG+ + D + + SV L + + +
Sbjct: 201 NLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQI 260
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
HG I F L I N++V MYA+C ++ A+ +F M ++D+ISW S++ G Q+G+A
Sbjct: 261 HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN-- 351
EAL L+DEM S KPN VT + L+ AC++ G GR+ + ++ I+ +L++
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRS-MTTDYSINPSLQHYT 379
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
++D+ ++ G LD AEN+ + I P + + +W L++ H + + ++L+ +
Sbjct: 380 CLLDLLSRSGHLDEAENLLDKI-PFKPDEPTWASLLSACMRHNNLEMGVRIADRVLD--L 436
Query: 412 KPD----HITFTSILSACSHAGLIDEGRKCFADM 441
KP+ +I +++ + G + + RK + M
Sbjct: 437 KPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSM 470
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/632 (34%), Positives = 349/632 (55%), Gaps = 57/632 (9%)
Query: 91 CVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA 150
C T +L S SN+ +L+ C++ + E + +HG +++TG + D +
Sbjct: 6 CTPTSQLSS-------ESNAAQTLHLLQRCSN---MEELRQIHGQMLKTGLILDEIPASK 55
Query: 151 LVDMYAKCGQTDDGC-----KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
L+ A C + G VFD + + W MI Y +++PEEAL+L+
Sbjct: 56 LL---AFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYH 112
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ ++ T + A + + + Q +H + I F ++ NS++ +Y++ G+++ A
Sbjct: 113 SVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSA 172
Query: 266 RLVFDMMEKRDLISWNSMLTGY-------------------------------IQNGQAS 294
RL+FD +++RD +SWNSM+ GY + G+
Sbjct: 173 RLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPK 232
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EAL LF MQ + K + V + + AC LG G+ H YI ++ID L ++
Sbjct: 233 EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLI 292
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
DMYAKCGDL+ A +F + E+ VS W +I+GY +HG GR+ALE+F +M GV+P+
Sbjct: 293 DMYAKCGDLEEAIEVFRKM--EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPN 350
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+TFT IL+ACSHAGL+ E + F M ++ KP ++HY CMVD+LGRAG L EA ++I
Sbjct: 351 QMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELI 410
Query: 474 KQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
+ MP+ PN ++WGALL AC IHG + L Q++P H G ++ +++I+AA+ +W
Sbjct: 411 ENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWN 470
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
+ ++R MK +G+ K SVI F D +P KE+ +E + ++ G
Sbjct: 471 QAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEG 530
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y P L L D+ED+++E +++HSEKLAV FG+++ P +++ KNLRVC DCH+ +
Sbjct: 531 YKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIK 590
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS +Y R+I++RD RFH F+ G C+C DYW
Sbjct: 591 LISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 214/424 (50%), Gaps = 56/424 (13%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-----ARSLFNSI 68
LL+ C+ + LRQIH + +GLI + A ++ + PN+ AR++F+ I
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGLILD--EIPASKLLAFC--ASPNSGSLAYARTVFDRI 78
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ +F+WNTMIR Y+N+ E L LY M + N+YTFPF+LKAC+S S + E
Sbjct: 79 F--RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEE 136
Query: 129 GKVVHGDIIRTGFLSDSYVQAAL-------------------------------VDMYAK 157
+ +H II+ GF S+ Y +L +D Y K
Sbjct: 137 TQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTK 196
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
CG+ + ++F+ M R+++SWT MI+ A KP+EAL LF + Q G+ D+V +VS
Sbjct: 197 CGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVST 256
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
A LG + + + +H Y + D + ++ MYA+CG++E+A VF ME++ +
Sbjct: 257 LQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV 316
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR----- 332
W +M++GY +G+ EAL F +MQ + +PN +T +++AC++ G +
Sbjct: 317 SVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFES 376
Query: 333 --KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
+ HG+ K ++D+ + G L AE + ++ P + N + W L+
Sbjct: 377 MERIHGF------KPSIEHYGCMVDLLGRAGLLKEAEELIENM-PVKPNAAIWGALLNAC 429
Query: 391 GMHG 394
+HG
Sbjct: 430 HIHG 433
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/610 (34%), Positives = 348/610 (57%), Gaps = 9/610 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
+N ++ Y+ G + + L+ M+ G + +TF VL A I G+ VH ++
Sbjct: 208 FNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVV 267
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ F+ + +V AL+D Y+K + + K+F EM D +S+ V+IT + EE+L
Sbjct: 268 KCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLE 327
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF++ Q ++ S ++ + +H AI + ++ + NS+V MYA
Sbjct: 328 LFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYA 387
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+C +A +F + + + W ++++GY+Q G + L LF EM + + T
Sbjct: 388 KCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYAS 447
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++ AC L S LG++ H II S + +A++DMYAKCG + A MF ++
Sbjct: 448 ILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEM--PV 505
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
RN SWN LI+ Y +G G AL F QM+ G++P+ ++F SIL ACSH GL++EG +
Sbjct: 506 RNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQY 565
Query: 438 FADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
F MT++ ++P +HYA MVDML R+G EA ++ +MP P++ +W ++L +CRIH
Sbjct: 566 FNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHK 625
Query: 497 E-----IAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
AA+ LF ++ +V MSNIYAA+ +W VGK+++ ++ +G++K A+S
Sbjct: 626 NQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSW 685
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
+E + F D +P KE+ +K++ + +++ GY PD +CALH+V++E + L
Sbjct: 686 VEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLK 745
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
YHSE++A+AF +++ + + V KNLR CNDCH+A + IS I R+I VRD++RFHHF
Sbjct: 746 YHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFT 805
Query: 671 GGTCSCNDYW 680
G+CSC DYW
Sbjct: 806 DGSCSCKDYW 815
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 225/452 (49%), Gaps = 9/452 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I+ Y G +TARSLF+S+ + W +I YA + +E L++ M R G+
Sbjct: 79 MIMGYLKSGNLSTARSLFDSMVQRSVVT--WTMLIGGYAQHNRFLEAFNLFADMCRHGMV 136
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ T +L + E VHG +++ G+ S V +L+D Y K C +
Sbjct: 137 PDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHL 196
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F M+ +D V++ ++T Y + +A+ LF K Q G T +V +A Q+ D+
Sbjct: 197 FKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDI 256
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
Q VH + + F+ ++ + N+++ Y++ + +AR +F M + D IS+N ++T
Sbjct: 257 EFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCC 316
Query: 288 IQNGQASEALLLFDEMQNS--DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
NG+ E+L LF E+Q + D + P L+ ++A + + ++GR+ H I ++
Sbjct: 317 AWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSL--NLEMGRQIHSQAIVTDAIS 374
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ + N+++DMYAKC A +F D+ + ++ W LI+GY G L+ F +
Sbjct: 375 EVLVGNSLVDMYAKCDKFGEANRIFADL--AHQSSVPWTALISGYVQKGLHEDGLKLFVE 432
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M + D T+ SIL AC++ + G++ + + + V + +VDM + G
Sbjct: 433 MHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGS 492
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ EA M ++MP+ N W AL+ A +G+
Sbjct: 493 IKEALQMFQEMPV-RNSVSWNALISAYAQNGD 523
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 186/395 (47%), Gaps = 15/395 (3%)
Query: 99 STMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC 158
++M ++G N+ F F ++ + + + ++ +S + ++ Y K
Sbjct: 31 ASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTN----TMIMGYLKS 86
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
G +FD M R +V+WT++I Y Q + EA LF + G++ D +T+ ++
Sbjct: 87 GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
S + V + VHG+ + + L + NS++ Y + ++ A +F M ++D +
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
++N++LTGY + G +A+ LF +MQ+ +P+ T +++A + + G++ H ++
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFV 266
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ N + + NA++D Y+K + A +F ++ E + S+NVLI +G +
Sbjct: 267 VKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEM--PEVDGISYNVLITCCAWNGRVEE 324
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
+LE F ++ F ++LS +++ ++ GR+ + EV +VD
Sbjct: 325 SLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVD 384
Query: 459 MLGRAGCLYEA----FDMIKQMPLPPNDSVWGALL 489
M + EA D+ Q +P W AL+
Sbjct: 385 MYAKCDKFGEANRIFADLAHQSSVP-----WTALI 414
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 128/299 (42%), Gaps = 34/299 (11%)
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
Q V I F + C N V + + G++ AR +FD M +++IS N+M+ GY+++
Sbjct: 27 QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86
Query: 291 GQASEALLLFDEMQNSD---------------------------CK----PNPVTALILV 319
G S A LFD M C+ P+ +T L+
Sbjct: 87 GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
S T S + HG+++ + N+++D Y K L A ++F H +E++
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFK--HMAEKD 204
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
++N L+ GY G A+ F +M + G +P TF ++L+A I+ G++ +
Sbjct: 205 NVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI 498
+ K + V ++D + + EA + +MP S + L+ C +G +
Sbjct: 265 FVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGIS-YNVLITCCAWNGRV 322
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/690 (34%), Positives = 359/690 (52%), Gaps = 43/690 (6%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H +L G + + LG +I Y GE A +F + S W ++ +
Sbjct: 25 QLHGALLKLGFGSDTM-LGNNLIDMYAKCGELRMAGEVFGGMPERNVVS--WTALMVGFL 81
Query: 87 NNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+G E L L MR S ++ N +T LKAC + G +HG +R GF
Sbjct: 82 RHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHH 141
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ- 204
V +LV +Y+K G+ D +VFD R+LV+W MI+ Y A ++L++F++ QQ
Sbjct: 142 VVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQR 201
Query: 205 ----EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF--LEDLCIQNSIVAMYAR 258
E D T S+ A G LG + VH + + + +++ MY +
Sbjct: 202 RQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVK 261
Query: 259 CGNV-EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
C + A VF+ +E+++ I W +++ G+ Q GQ EA+ LF +S + +
Sbjct: 262 CRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSS 321
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+V + GR+ H Y + + +D ++ N+++DMY KCG D A F ++ P+
Sbjct: 322 VVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREV-PA- 379
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
RNV SW +I G G HGHG++A+ F +M EGV+PD + + ++LSACSH+GL++E R+
Sbjct: 380 RNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRY 439
Query: 438 FADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH- 495
F+ + ++P +HYACMVD+LGRAG L EA D++ MP+ P VW LL ACR+H
Sbjct: 440 FSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHK 499
Query: 496 ----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
G A L ++ ++ +V++SNI+A + WRE ++R M+ +GL+K S +
Sbjct: 500 NVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSWV 559
Query: 552 EYGKDIQGFH-TADRVNPYWKE---VYKKVESMAVEIKMAGYMPD-----LSCALHDVED 602
E GK+ F+ D +P + V + VE E GY P ALHDV++
Sbjct: 560 EVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRE--RLGYSPGSSSSSSEAALHDVDE 617
Query: 603 EDREHMLNYHSEKLAVAF------------GIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
E R L HSE+LAV G+ + V++V KNLRVC DCH F+ +
Sbjct: 618 ESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGDCHEFFKGL 677
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S + R ++VRDANRFH FE G CSC DYW
Sbjct: 678 SSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 209/419 (49%), Gaps = 19/419 (4%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L+A A++S I G +HG +++ GF SD+ + L+DMYAKCG+ +VF M R+
Sbjct: 10 MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQ-EGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+VSWT ++ + + E L L + + + T+ + A G +GD+ +H
Sbjct: 70 VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIH 129
Query: 235 GYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQAS 294
G + F + NS+V +Y++ G + AR VFD R+L++WN+M++GY G
Sbjct: 130 GACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGR 189
Query: 295 EALLLFDEMQN-----SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI--DA 347
++LL+F EMQ D +P+ T L+ AC LG+ + G + H ++ + +A
Sbjct: 190 DSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNA 249
Query: 348 TLRNAVMDMYAKCG-DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
L A++DMY KC L A +FN + ++N W +I G+ G ++A+E F +
Sbjct: 250 ILAGALLDMYVKCRCLLPMAMQVFNRL--EQKNAIQWTTVIVGHAQEGQVKEAMELFGRF 307
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
GV+ D +S++ + L+++GR+ K +V ++DM + G
Sbjct: 308 WSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLT 367
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIHGE-IAANYLFQ------LEPEHTGYFVLMS 518
EA +++P N W A++ HG A ++F+ +EP+ Y L+S
Sbjct: 368 DEAARRFREVP-ARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLS 425
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 195/401 (48%), Gaps = 19/401 (4%)
Query: 16 LKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
LK+C + + IH + +G + + +++ Y+ G AR +F+
Sbjct: 113 LKACGVVGDMAAGVWIHGACVRAGFEGHHV-VANSLVLLYSKGGRIGDARRVFDGTVFRN 171
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRR-----SGISSNSYTFPFVLKACASNSLIL 127
+ WN MI YA+ GH ++L ++ M++ + +TF +LKAC S
Sbjct: 172 LVT--WNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAR 229
Query: 128 EGKVVHGDIIRTGF--LSDSYVQAALVDMYAKCG-QTDDGCKVFDEMSVRDLVSWTVMIT 184
EG VH ++ G S++ + AL+DMY KC +VF+ + ++ + WT +I
Sbjct: 230 EGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIV 289
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
+ Q + +EA+ LF + G+ +D + SV V + + VH Y +
Sbjct: 290 GHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGL 349
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D+ + NS++ MY +CG ++A F + R+++SW +M+ G ++G EA+ +F+EM+
Sbjct: 350 DVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMR 409
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDL 363
+P+ V L L+SAC++ G + R++ I + ++ A ++D+ + G+L
Sbjct: 410 AEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGEL 469
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALE 401
A+++ + P V W L++ +H + GR+A E
Sbjct: 470 SEAKDLVATM-PMAPTVGVWQTLLSACRVHKNVTVGREAGE 509
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/651 (34%), Positives = 350/651 (53%), Gaps = 26/651 (3%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR-SGISSNS 110
Y GE + A +F + + S W ++ + +G L L MR S + N
Sbjct: 2 YVKCGELDLACEVFGGMRDRNVVS--WTALMVGFLRHGDATGCLRLLGEMRTASEAAPNE 59
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
YT LKAC G +HG +R G+ V ++LV +Y+K G+ D +VFD
Sbjct: 60 YTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDG 119
Query: 171 MSV-RDLVSWTVMITAYEQAEKPEEALILFQKTQQ-EGL-LSDSVTIVSVASAVGQLGDV 227
+ + +W M++ Y A +AL++F++ ++ EG D T S+ A LG
Sbjct: 120 AGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGAT 179
Query: 228 LKAQAVHGYAICNAF--LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ VH + F + + ++V MY +C + A VF+ +E++++I W +++
Sbjct: 180 REGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVV 239
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
G+ Q GQ +EAL LF S +P+ +V + GR+ H Y I
Sbjct: 240 GHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGT 299
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + N+++DMY KCG D AE MF ++ NV SW ++ G G HG GR+A+ F +
Sbjct: 300 DVSAGNSIVDMYLKCGLPDEAERMFREMRAP--NVVSWTTMVNGLGKHGLGREAVALFEE 357
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M GV+PD +T+ ++LSACSHAGL+DE R+ F+ + + +V+P+ +HYACMVD+LGRAG
Sbjct: 358 MRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAG 417
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA D+I+ MP+ P VW LL ACR+H G A + L ++ ++ +V +SN
Sbjct: 418 ELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSN 477
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA---DRVNPYWKEVYKK 576
+ A + +WRE K+R+ M+ +GLKK S +E GK++ F+ + +P ++ +
Sbjct: 478 VLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRV 537
Query: 577 VESMAVEIK-MAGY-MPDLSCALHDVEDEDREHMLNYHSEKLAVAF-----GIMNLTPEA 629
+ M ++ GY D ALHDV++E R L HSE+LAV G+
Sbjct: 538 LRDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGE 597
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLRVC DCH F+ +S + RR ++VRDANRFH FE G+CSC DYW
Sbjct: 598 PIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 199/389 (51%), Gaps = 13/389 (3%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+ + +++ Y+ G AR +F+ + WN M+ YA+ GH + L ++ MRR
Sbjct: 96 VASSLVLVYSKGGRIGDARRVFDGAGLGSGIA-TWNAMVSGYAHAGHGRDALLVFREMRR 154
Query: 104 --SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF--LSDSYVQAALVDMYAKCG 159
+ +TF +LKAC+ EG VH + +GF S++ + ALVDMY KC
Sbjct: 155 HEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCR 214
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
+ +VF+ + ++++ WT ++ + Q + EAL LF++ + G DS + SV
Sbjct: 215 RLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVG 274
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
+ V + + VH Y I + D+ NSIV MY +CG ++A +F M +++S
Sbjct: 275 VLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVS 334
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI- 338
W +M+ G ++G EA+ LF+EM+ +P+ VT L L+SAC++ G R++ I
Sbjct: 335 WTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIR 394
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH--- 395
+ ++ A ++D+ + G+L A ++ + P E V W L++ +H
Sbjct: 395 RDRTVRPKAEHYACMVDLLGRAGELREARDLIRTM-PMEPTVGVWQTLLSACRVHKDVAV 453
Query: 396 GRKALEFFSQMLEEGVKP-DHITFTSILS 423
GR+A + M +G P +++T +++L+
Sbjct: 454 GREAGDVLLAM--DGDNPVNYVTLSNVLA 480
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 178/379 (46%), Gaps = 18/379 (4%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF--QKTQQEGLLSDS 211
MY KCG+ D C+VF M R++VSWT ++ + + L L +T E +
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEA-APNE 59
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
T+ + A +GD +HG + + E + +S+V +Y++ G + AR VFD
Sbjct: 60 YTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDG 119
Query: 272 ME-KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC--KPNPVTALILVSACTYLGSR 328
+ +WN+M++GY G +ALL+F EM+ + +P+ T L+ AC+ LG+
Sbjct: 120 AGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGAT 179
Query: 329 QLGRKFHGYIINSNMKI--DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ G + H + S +A L A++DMY KC L A +F + +NV W +
Sbjct: 180 REGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERL--ERKNVIQWTAV 237
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
+ G+ G +ALE F + G +PD +S++ + L+++GR+ K
Sbjct: 238 VVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPT 297
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-EIAANYLFQ 505
+V +VDM + G EA M ++M PN W ++ HG A LF+
Sbjct: 298 GTDVSAGNSIVDMYLKCGLPDEAERMFREMR-APNVVSWTTMVNGLGKHGLGREAVALFE 356
Query: 506 ------LEPEHTGYFVLMS 518
+EP+ Y L+S
Sbjct: 357 EMRAGGVEPDEVTYLALLS 375
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/645 (34%), Positives = 358/645 (55%), Gaps = 16/645 (2%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
LG ++ Y + A + F+ I YS+ M+ AY N + L+L+
Sbjct: 19 LGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYA--IMMGAYQENDLHKKALQLFKKSIN 76
Query: 104 SGISSNSYTFPFVLKACA--SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
+ N T+ VLK+CA + +GK +H I GF +D VQ +L+ MYAKCG
Sbjct: 77 EELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSF 136
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
VF++M ++L+S+T MI AY K EA L++K EG++ D I + A+A+
Sbjct: 137 KFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPD---IYAYAAAL 193
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+ + +A+H + N N++V MY R G + A+ VFD + +DL S+N
Sbjct: 194 AVCPTIREGEAIH-VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYN 252
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ + + S+A+ L+ EM+ + +PN T ++ AC+ LG+ G++ H +
Sbjct: 253 NMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGG 312
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ D A+++MYAKCG A +FND +NV +W L++ Y G + LE
Sbjct: 313 DQPTDVAYNTALVNMYAKCGSTHEARAVFNDC--GLKNVFTWTSLMSAYSQPGQSQYRLE 370
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDML 460
+ +M EGV PD +TFT+I +ACSH+GL DEG F M + + P HY CM+D+L
Sbjct: 371 AYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLL 430
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFV 515
GR G L EA ++++ MP P+ W LL AC+++G++ A + +L P +G ++
Sbjct: 431 GRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYL 490
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
LM N+YA + KW +V ++++ +K +GL KP S+IE + I F D +P +E+
Sbjct: 491 LMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRA 550
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
+++ + ++ AGY PD L DV +E + +L +HSE++A+ G++ A + + K
Sbjct: 551 RLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVK 610
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLR+C DCHS F+ +S + RK++VRD++RFH F+ G+CSC DYW
Sbjct: 611 NLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 182/350 (52%), Gaps = 9/350 (2%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
++++ LV Y +C DD F E++ ++ S+ +M+ AY++ + ++AL LF+K+
Sbjct: 16 ETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSI 75
Query: 204 QEGLLSDSVTIVSVASAVGQLGD--VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
E L + T V+V + LG+ + + +H +AI F DL +QNS++ MYA+CG+
Sbjct: 76 NEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGS 135
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+ A VF+ ME ++LIS+ SM+ Y + EA L+ +M + P+ ++
Sbjct: 136 FKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAV 195
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C + + G H + N + NA++ MY + G + +A+ +F+ I ++++
Sbjct: 196 CPTI---REGEAIHVKLGNHERRT-PVCSNALVGMYGRFGRIASAKWVFDGIR--YKDLA 249
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
S+N +IA + + G KA+ + +M ++P+ TFTS+L ACS G + EG++ +
Sbjct: 250 SYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV 309
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+V + +V+M + G +EA + L N W +L+ A
Sbjct: 310 KGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGL-KNVFTWTSLMSA 358
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/614 (35%), Positives = 348/614 (56%), Gaps = 15/614 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS---NSLILEGKVVHG 134
+ I A +G + L ++ M R G+ N +TFP KA AS S I G +H
Sbjct: 85 YTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTI--GPQIHS 142
Query: 135 DIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
IR G+L D +V A +DMY K G+ +F EM R++V+W ++T +P
Sbjct: 143 LAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPL 202
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
E + + ++ G L + V+ + +A + + HG+ + F D+ + NS+V
Sbjct: 203 ETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMV 262
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
Y +C KAR VFD M R+ +SW SM+ Y QNG EA + + S +P
Sbjct: 263 DFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDF 322
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
++ C L LGR H + S + + + +A++DMY KCG ++ AE +F +
Sbjct: 323 MVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYET 382
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLID 432
+RN+ +WN +I GY G + AL F M+ G P++IT +++++CS GL
Sbjct: 383 --PQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTK 440
Query: 433 EGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G + F M + ++P +HYAC+VD+LGRAG +A+++I+ MP+ P+ SVWGALL A
Sbjct: 441 DGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGA 500
Query: 492 CRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C++HG+ IAA LF+L+P+ +G VL+SN++A++ +W E +R++MKN G+KK
Sbjct: 501 CKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDP 560
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S + + + F D + + E+ + + +++ AGYMPD +L+D+E+E++E
Sbjct: 561 GCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKE 620
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
+ HSEKLA+AFG++ + P +++ KNLR+C DCH AF+FIS I R+IIVRD NRF
Sbjct: 621 SEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRF 680
Query: 667 HHFEGGTCSCNDYW 680
HHF+ CSC DYW
Sbjct: 681 HHFKQYQCSCGDYW 694
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 146/329 (44%), Gaps = 29/329 (8%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR++F+ + S S W +M+ AYA NG E Y RRSG + L C
Sbjct: 274 ARAVFDGMGVRNSVS--WCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTC 331
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A + G+ +H +R+ ++ +V +ALVDMY KCG +D ++F E R+LV+W
Sbjct: 332 AGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWN 391
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDS-VTIVSVASAVGQLGDVLKAQAVHGYAIC 239
MI Y + AL++F + G + + +T+V+V ++ + G + K GY +
Sbjct: 392 AMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSR-GGLTK----DGYELF 446
Query: 240 NAFLEDLCIQNS------IVAMYARCGNVEKARLVFDMMEKRDLIS-WNSMLTGYIQNGQ 292
E I+ +V + R G E+A V M R IS W ++L +G+
Sbjct: 447 ETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGK 506
Query: 293 ------ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
A+E L E+ D + + + + SA + + + ++ I +
Sbjct: 507 TELGRIAAEKLF---ELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCS 563
Query: 347 -ATLRNAVMDMYAKCGDLDTAENMFNDIH 374
T +N V AK DT M+N+I
Sbjct: 564 WVTWKNVVHVFRAK----DTKHEMYNEIQ 588
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ-LGRKFH 335
++S+ + ++G Q+G+ AL F M +PN T A R +G + H
Sbjct: 82 VVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIH 141
Query: 336 GYIIN-SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
I + +D + A +DMY K G L A ++F ++ RNV +WN ++ + G
Sbjct: 142 SLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEM--PNRNVVAWNAVMTNAVLDG 199
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYA 454
+ +E + + E G P+ ++ + +AC+ A + G + + K + +V
Sbjct: 200 RPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLN 259
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
MVD G+ C +A + M + N W +++ A
Sbjct: 260 SMVDFYGKCRCAGKARAVFDGMGV-RNSVSWCSMVAA 295
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+D HP+ V S+ I+G HG AL F+ ML G++P+ TF S A + A
Sbjct: 76 SDPHPT---VVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPP 132
Query: 431 IDE-GRKCFADMTKLSVKPEVKHYAC-MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
G + + + P +C +DM + G L A + +MP N W A+
Sbjct: 133 RSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMP-NRNVVAWNAV 191
Query: 489 L 489
+
Sbjct: 192 M 192
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/607 (35%), Positives = 344/607 (56%), Gaps = 40/607 (6%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T+ +++ C+ + EGK VH I +GF+ + ++ MYAKCG D KVFDEM
Sbjct: 89 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEM 148
Query: 172 SVRDLV-------------------------------SWTVMITAYEQAEKPEEALILFQ 200
RD+ SWT M+T Y + ++PEEAL+L+
Sbjct: 149 PERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYS 208
Query: 201 KTQQEGLLSDSV-TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
Q+ ++ T+ S +A + + + + +HG+ + D + +S++ MY +C
Sbjct: 209 LMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 268
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G +++AR +FD + +D++SW SM+ Y ++ + E LF E+ S +PN T ++
Sbjct: 269 GCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVL 328
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+AC L + +LGR+ HGY+ + ++++DMY KCG++++A ++ + + +
Sbjct: 329 NACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGC--PKPD 386
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
+ S LI GY +G +AL++F +L+ G KPDH+TF ++LSAC+HAGL+++G + F
Sbjct: 387 LVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 446
Query: 440 DMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI 498
+T K + HY C+VD+L R+G + ++ +MP+ P+ +W ++L C +G I
Sbjct: 447 SITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNI 506
Query: 499 -----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
AA LF++EPE+ +V M+NIYAA+ KW E GK+R+ M+ G+ K S E
Sbjct: 507 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEI 566
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F AD +P + ++ + + + ++K GY+P S LHDVEDE +E L YHS
Sbjct: 567 KRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 626
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLAVAF I++ ++V KNLR C DCHSA +FIS I +RKI +RD+ RFH FE G
Sbjct: 627 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQ 686
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 687 CSCRDYW 693
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 203/403 (50%), Gaps = 12/403 (2%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISS-NS 110
Y G AR+LF+ + SYS W M+ Y E L LYS M+R S N
Sbjct: 163 YAEVGLLEEARNLFDEMPERDSYS--WTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNI 220
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
+T + A A+ I GK +HG I+R G SD + ++L+DMY KCG D+ +FD+
Sbjct: 221 FTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDK 280
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+ +D+VSWT MI Y ++ + E LF + + T V +A L
Sbjct: 281 IIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEELG 340
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ VHGY F +S++ MY +CGN+E AR V D K DL+S S++ GY QN
Sbjct: 341 RQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQN 400
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR 350
G+ EAL FD + S KP+ VT + ++SACT+ G + G +F Y I + T
Sbjct: 401 GKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF-YSITEKHDLTHTSD 459
Query: 351 N--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ ++D+ A+ G + +++ +++ P + + W ++ G +G+ A E ++ +
Sbjct: 460 HYTCLVDLLARSGRFEQLKSVLSEM-PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK 518
Query: 409 EGVKPDH-ITFTSILSACSHAGLIDEGRKCFADMTKLSV--KP 448
++P++ +T+ ++ + + AG +E K M ++ + KP
Sbjct: 519 --IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKP 559
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 175/380 (46%), Gaps = 41/380 (10%)
Query: 133 HGDIIRTGFLSDSYV-QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
HG I ++ LS SY Q D + +DG V + + + + + ++ +
Sbjct: 14 HGLIFKSNLLSSSYASQKRFSDKKFFDSKLEDGGVVVERLCRANRFGEAIDVLCGQKLLR 73
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EA+ L + ++ + T ++ Q + + + VH + + F+ + I N
Sbjct: 74 --EAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 127
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC--- 308
I+ MYA+CG++ AR VFD M +RD+ SWN M+ GY + G EA LFDEM D
Sbjct: 128 ILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSW 187
Query: 309 ---------KPNPVTALILVSACTYLGSRQ--------------------LGRKFHGYII 339
K P AL+L S + + + G++ HG+I+
Sbjct: 188 TAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIV 247
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ + D L +++MDMY KCG +D A N+F+ I +++V SW +I Y R+
Sbjct: 248 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI--IDKDVVSWTSMIDRYFKSSRWREG 305
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
FS+++ +P+ TF+ +L+AC+ + GR+ MT++ P + ++DM
Sbjct: 306 FSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDM 365
Query: 460 LGRAGCLYEAFDMIKQMPLP 479
+ G + A ++ P P
Sbjct: 366 YTKCGNIESARHVVDGCPKP 385
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/680 (32%), Positives = 371/680 (54%), Gaps = 16/680 (2%)
Query: 13 DQLLKSC---NFLASLRQIHSSLTTSGLINQA--LHLGAKIIIKYTTYGEPNTARSLFNS 67
++LLK C ++L + IH L + ++A ++ +I Y GE AR +F+
Sbjct: 35 NELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDL 94
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLI 126
+ S W M++ Y N+G E L+L+ +M S S N + V K+C+S+ I
Sbjct: 95 MPERNVVS--WCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRI 152
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
EGK HG +++G +S +V+ LV MY+ C + +V D++ DL ++ ++ Y
Sbjct: 153 EEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ +E + ++ +E L+ D++T +S L D+ A+ +H + F ++
Sbjct: 213 LECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEV 272
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+I+ MY +CG V A+ VFD ++++ +++ Y Q+ EAL LF +M
Sbjct: 273 EASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ PN T I +++ L + G HG ++ S + + NA+++MYAK G ++ A
Sbjct: 333 EVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
F+ + + R++ +WN +I G+ HG GR+ LE F +M+ G P+ ITF +L ACS
Sbjct: 393 RKAFSGM--TFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACS 450
Query: 427 HAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H G +++G F M K +V+P+++HY C+V +L +AG +A D ++ P+ + W
Sbjct: 451 HVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
ALL AC + G+ A Y P +G +VL+SNI+A S +W V ++R M +
Sbjct: 511 RALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKR 570
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK S I F + +P +Y K++ + +I+ GY PD++ HDV
Sbjct: 571 GVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFHDV 630
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
++E RE L+YHSEKLAVA+G+M + + VTKN+R+C+DCHSA + IS I +R I++
Sbjct: 631 DEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVI 690
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD+NRFHHF G CSC DYW
Sbjct: 691 RDSNRFHHFRDGQCSCCDYW 710
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/632 (34%), Positives = 348/632 (55%), Gaps = 57/632 (9%)
Query: 91 CVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA 150
C T +L S SN+ +L+ C++ + E + +HG +++TG + D +
Sbjct: 6 CTPTSQLSS-------ESNAAQTLHLLQRCSN---MEELRQIHGQMLKTGLILDEIPASK 55
Query: 151 LVDMYAKCGQTDDGC-----KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
L+ A C + G VFD + + W MI Y +++PEEAL+L+
Sbjct: 56 LL---AFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYH 112
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ ++ T + A + + Q +H + I F ++ NS++ +Y++ G+++ A
Sbjct: 113 SVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSA 172
Query: 266 RLVFDMMEKRDLISWNSMLTGY-------------------------------IQNGQAS 294
RL+FD +++RD +SWNSM+ GY + G+
Sbjct: 173 RLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPK 232
Query: 295 EALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
EAL LF MQ + K + V + + AC LG G+ H YI ++ID L ++
Sbjct: 233 EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLI 292
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
DMYAKCGDL+ A +F + E+ VS W +I+GY +HG GR+ALE+F +M GV+P+
Sbjct: 293 DMYAKCGDLEEAIEVFRKM--EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPN 350
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+TFT IL+ACSHAGL+ E + F M ++ KP ++HY CMVD+LGRAG L EA ++I
Sbjct: 351 QMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELI 410
Query: 474 KQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
+ MP+ PN ++WGALL AC IHG + L Q++P H G ++ +++I+AA+ +W
Sbjct: 411 ENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWN 470
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
+ ++R MK +G+ K SVI F D +P KE+ +E + ++ G
Sbjct: 471 QAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEG 530
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y P L L D+ED+++E +++HSEKLAV FG+++ P +++ KNLRVC DCH+ +
Sbjct: 531 YKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIK 590
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS +Y R+I++RD RFH F+ G C+C DYW
Sbjct: 591 LISKVYAREILMRDRTRFHLFKDGNCTCGDYW 622
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 213/424 (50%), Gaps = 56/424 (13%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-----ARSLFNSI 68
LL+ C+ + LRQIH + +GLI + A ++ + PN+ AR++F+ I
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGLILD--EIPASKLLAFC--ASPNSGSLAYARTVFDRI 78
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ +F+WNTMIR Y+N+ E L LY M + N+YTFPF+LKAC+S S E
Sbjct: 79 F--RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEE 136
Query: 129 GKVVHGDIIRTGFLSDSYVQAAL-------------------------------VDMYAK 157
+ +H II+ GF S+ Y +L +D Y K
Sbjct: 137 TQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTK 196
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
CG+ + ++F+ M R+++SWT MI+ A KP+EAL LF + Q G+ D+V +VS
Sbjct: 197 CGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVST 256
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
A LG + + + +H Y + D + ++ MYA+CG++E+A VF ME++ +
Sbjct: 257 LQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGV 316
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR----- 332
W +M++GY +G+ EAL F +MQ + +PN +T +++AC++ G +
Sbjct: 317 SVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFES 376
Query: 333 --KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
+ HG+ K ++D+ + G L AE + ++ P + N + W L+
Sbjct: 377 MERIHGF------KPSIEHYGCMVDLLGRAGLLKEAEELIENM-PVKPNAAIWGALLNAC 429
Query: 391 GMHG 394
+HG
Sbjct: 430 HIHG 433
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/657 (34%), Positives = 343/657 (52%), Gaps = 41/657 (6%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR +F+ I ++S W+ ++ Y N E LE+Y M R IS ++YT VL AC
Sbjct: 1 ARQVFDRIKQRNAFS--WSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAAC 58
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS-------- 172
+ EG++V GF D V +L+ ++AKCG ++ VF M
Sbjct: 59 TKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISV 118
Query: 173 ----------------------VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
V+D+VSW MI AY ++A LF + G D
Sbjct: 119 TAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPD 178
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
T S+ A + + +H F D +QN++++MY RCG++E AR F
Sbjct: 179 IYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFY 238
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
+EK++L +WN+ML Y Q + +AL L+ M P+ T +V +C LG+ +
Sbjct: 239 SIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 298
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G+ H + + D L A+++MYAKCG L A+ F+ I S ++V SW+ +IA
Sbjct: 299 GKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGI--SNKDVVSWSAMIAAS 356
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPE 449
HGH +ALE M +G+ + +T +S+L ACSH G + EG F +++ ++ +
Sbjct: 357 AQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERD 416
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQ---- 505
++ +D+LGRAG L EA ++ MP + LL C++HG++ F
Sbjct: 417 EENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIV 476
Query: 506 -LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
LEPE+ G +VL++N+YAA+ +W +V KLR M+ KG+K+ S IEY I F D
Sbjct: 477 ALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGD 536
Query: 565 RVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIM 623
NP E+ ++E + +K GY+PD HDV D+ +E +L +HSEK+A+ FG++
Sbjct: 537 TSNPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLI 596
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P + +++ KNLRVC+DCH+ + S I R+IIVRD RFHHFEGG CSC DYW
Sbjct: 597 TSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 194/398 (48%), Gaps = 9/398 (2%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF 115
G ++SLF ++ S WN MI AY GH + L+ M G + + YTF
Sbjct: 127 GSLKDSKSLFLTMDVKDVVS--WNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSS 184
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L ACAS + +G+++H I GF D +Q L+ MY +CG + + F + ++
Sbjct: 185 ILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKE 244
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
L +W M+ AY Q +K ++AL L++ EG D T SV + LG + + + +H
Sbjct: 245 LGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHE 304
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ F +D+ + ++V MYA+CG++ A+ FD + +D++SW++M+ Q+G A E
Sbjct: 305 CSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEE 364
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVM 354
AL L M N VTA ++ AC++ G G F G + ++ D +
Sbjct: 365 ALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFI 424
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM--LEEGVK 412
D+ + G L AE++ + + P + + + L+ G +HG R+ F ++ LE
Sbjct: 425 DLLGRAGWLKEAEHVLHTM-PFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEPENP 483
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
++ ++ +A AG D+ K M K VK +
Sbjct: 484 GSYVLLNNMYAA---AGRWDDVAKLRRYMRKKGVKRQT 518
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/676 (33%), Positives = 358/676 (52%), Gaps = 53/676 (7%)
Query: 44 LGAKIIIKYTTYGEP-NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
+G I+ YT + A F+ + Y+ W+TMI A ++ G + +Y
Sbjct: 260 IGTSILNVYTRDASALDIAIKFFDGMVERNEYT--WSTMIAALSHGGRIDAAIAVYGRDP 317
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
I S + +L A I E +++ I +S A++ Y + G D
Sbjct: 318 VKSIPSQTA----LLTGLARCGRITEARILFEQIPDPIVVS----WNAMITGYMQNGMVD 369
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+ ++FD M R+ +SW MI Y Q + EEAL L Q + G+L ++ S A
Sbjct: 370 EAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACS 429
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
+G + + VH A+ + + N++++MY +C N+E R VF+ M +D +SWNS
Sbjct: 430 HIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNS 489
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDC-------------------------------KPN 311
+ +QN +A +FD M + D KPN
Sbjct: 490 FIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPN 549
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
IL+S C LGS +LG++ H I M + + NA+M MY KCG D+ +F+
Sbjct: 550 SPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADS-HKVFD 608
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ER++ +WN I G HG GR+A++ + M GV P+ +TF +L+ACSHAGL+
Sbjct: 609 SM--EERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLV 666
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
DEG + F M++ + P ++HYACMVD+LGR G + A I MP+ P+ +W ALL
Sbjct: 667 DEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLG 726
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC+IH G AA LF EP + G +V++SNIY++ W EV +LR+ MK +G+ K
Sbjct: 727 ACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKE 786
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S ++ + F T D+ + +E+ ++ + ++ GY+PD LHD+++E +
Sbjct: 787 PGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQK 846
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
E L YHSEKLAVA+G++ +TP+ + +Q+ KNLR+C DCH+ +F+S++ +R I +RD N
Sbjct: 847 ESSLLYHSEKLAVAYGLL-VTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGN 905
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G+CSC D+W
Sbjct: 906 RFHHFRNGSCSCGDFW 921
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 192/441 (43%), Gaps = 56/441 (12%)
Query: 56 GEPNTARSLFNSI-HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
G AR +F+++ H D WN+MI AY N+G + L+ + SG N T
Sbjct: 47 GRLREAREVFDAMPHRD---IIAWNSMISAYCNSGMLEDARILFDAI--SG--GNVRTAT 99
Query: 115 FVLKACASNSLILEGK---------------------VVHGDIIRTGFLSDSYVQA---- 149
+L A +L+ + V +GDI L D+
Sbjct: 100 ILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTS 159
Query: 150 --ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
++V Y Q D +F +M R+LV+WTVMI+ Y + E+ + +F+ EG
Sbjct: 160 WNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGA 219
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR-CGNVEKAR 266
D SV SAV L D+ + + + F D+ I SI+ +Y R ++ A
Sbjct: 220 SPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAI 279
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
FD M +R+ +W++M+ G+ A+ ++ +PV ++ +A G
Sbjct: 280 KFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR--------DPVKSIPSQTAL-LTG 330
Query: 327 SRQLGRKFHGYIINSNMKIDATLR-NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ GR I+ + + NA++ Y + G +D A+ +F+ + RN SW
Sbjct: 331 LARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRM--PFRNTISWAG 388
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS 445
+IAGY +G +AL+ + G+ P + TS ACSH G ++ GR+ + L+
Sbjct: 389 MIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHS----LA 444
Query: 446 VKP--EVKHYAC--MVDMLGR 462
VK + Y C ++ M G+
Sbjct: 445 VKAGCQFNSYVCNALISMYGK 465
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 180/405 (44%), Gaps = 28/405 (6%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D +A + A+ G+ + +VFD M RD+++W MI+AY + E+A ILF
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNV 262
+ + ++ + S +LG VL A+ V + E + N++V+ Y + G++
Sbjct: 92 GGNVRTATILL----SGYARLGRVLDARRVF-----DGMPERNTVAWNAMVSCYVQNGDI 142
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
AR +FD M RD+ SWNSM+TGY + Q +A LF +M + N VT +++S
Sbjct: 143 TMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMP----QRNLVTWTVMISGY 198
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS--ERNV 380
+ G + + D + +V+ DL E + + + E +V
Sbjct: 199 VRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDV 258
Query: 381 SSWNVLIAGYGMHGHGRK-ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
++ Y A++FF M+E + T++++++A SH G ID +
Sbjct: 259 VIGTSILNVYTRDASALDIAIKFFDGMVER----NEYTWSTMIAALSHGGRIDAAIAVYG 314
Query: 440 DMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI- 498
S+ + ++ L R G + EA + +Q+P P S W A++ +G +
Sbjct: 315 RDPVKSIPSQT----ALLTGLARCGRITEARILFEQIPDPIVVS-WNAMITGYMQNGMVD 369
Query: 499 AANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
A LF P +T + M YA + + E L + + G+
Sbjct: 370 EAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGM 414
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/588 (37%), Positives = 341/588 (57%), Gaps = 15/588 (2%)
Query: 18 SCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
SC+ L SL R+IH + SGL + +L + +I Y G A ++FNSI + S
Sbjct: 220 SCSSLQSLTHGREIHGVVVKSGL-DVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSV 278
Query: 75 ---SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ +WN MI Y +NG + L L+ M GI + T + C+ + I GK
Sbjct: 279 RRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQ 338
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG I + G ++ V+ AL+DMY KCG G K+F +L+ W+ +I+ Q+
Sbjct: 339 IHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGC 398
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P +AL LF + + E L+DS +V+V A L + +HG A F+ D+ + ++
Sbjct: 399 PTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSA 458
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V +YA+C ++ ++ VF + ++DL+SWN++++GY Q+ A EAL F +MQ + +PN
Sbjct: 459 LVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPN 518
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
VT ++S C +L L ++ HGY+I + + N+++ YAKCGD++++ F
Sbjct: 519 TVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFE 578
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ERN SWN +I G GMH + + F +M+ G+KPDH+TFT+ILSACSHAG +
Sbjct: 579 KM--PERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRV 636
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
DEG K F M + ++KP+++ Y CMVD+LGRAG L +A+D+I MP P+D +WG+LL
Sbjct: 637 DEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLG 696
Query: 491 ACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
+C+ HG EI AN++F+L P GY VL++N+Y K RE K+R ++K+ GLKK
Sbjct: 697 SCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKK 756
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
S IE + F DR + E+Y VES+ EIK AGY+P +
Sbjct: 757 PGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIKRAGYIPQI 804
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 204/410 (49%), Gaps = 10/410 (2%)
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYT-FPFVLK 118
+++ L I S SF N +IR Y +G + + +Y M G+ + FP ++K
Sbjct: 59 SSKPLSTKIQTFVSVSFA-NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIK 117
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
A + +G+ +HG +++ G L D V +L+ MY KCG +D ++F++M DLVS
Sbjct: 118 AFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVS 177
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYA 237
W MI+ ++++ +L+ F+ E G+ + V VS + L + + +HG
Sbjct: 178 WNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVV 237
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM-----EKRDLISWNSMLTGYIQNGQ 292
+ + + + +S++ MY +CG+++ A +F+ + +R+ + WN M++GY+ NG
Sbjct: 238 VKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGC 297
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
S+ALLLF +M KP+ T + L S C+ G++ HG I +K + + A
Sbjct: 298 FSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETA 357
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++DMY KCGD+ T +F N+ W+ +I+ G KALE F + E
Sbjct: 358 LLDMYLKCGDMGTGLKIFR--RSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGL 415
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
D ++L ACS L EG + TK+ +V + +VD+ +
Sbjct: 416 ADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAK 465
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 189/367 (51%), Gaps = 14/367 (3%)
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
A G L DV K + +HG+ + L+D+ + NS++ MY +CG VE A +F+ M + DL+S
Sbjct: 118 AFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVS 177
Query: 280 WNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
WN+M++G+ ++ + +L+ F M PN V + + +C+ L S GR+ HG +
Sbjct: 178 WNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVV 237
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE---RNVSSWNVLIAGYGMHGH 395
+ S + ++ L +++++MY KCG + AEN+FN I + RN WNV+I+GY +G
Sbjct: 238 VKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGC 297
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
+AL F +M+ G+KPD+ T S+ S CS + I G++ + K +K ++
Sbjct: 298 FSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETA 357
Query: 456 MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG----EIAANYLFQLEPEHT 511
++DM + G + + ++ N +W A++ C G + Y F++E
Sbjct: 358 LLDMYLKCGDMGTGLKIFRRSQ-NHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLA 416
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF-SVIEYGKDIQGFHTADRVNPYW 570
+L++ + A S+ + E M+ GL F S + G + + R Y
Sbjct: 417 DSGILVAVLRACSSLTLK----PEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYS 472
Query: 571 KEVYKKV 577
K+V+ ++
Sbjct: 473 KKVFLRL 479
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/589 (35%), Positives = 337/589 (57%), Gaps = 39/589 (6%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV--------------- 173
G+ VH I+R GF + ++ + LVDMYAK G D +VFDEM V
Sbjct: 168 GRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLR 227
Query: 174 ----------------RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
RD ++WT M+T Q EAL +F++ + EG+ D T S+
Sbjct: 228 CKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSI 287
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
+A G L + + +H Y I + ++ + +++V MY++C ++ A VF M +++
Sbjct: 288 LTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI 347
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
ISW +M+ GY QNG EA+ +F EMQ KPN T ++S+C L S + G +FH
Sbjct: 348 ISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCM 407
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ S ++ T+ +A++ +Y KCG ++ A +F+++ P V S+ L++GY G +
Sbjct: 408 ALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEM-PFHDQV-SYTALVSGYAQFGKAK 465
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACM 456
+ ++ F +ML +GVKP+ +TF +LSACS +GL+++G F M + + HY CM
Sbjct: 466 ETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCM 525
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHT 511
+D+ R+G L EA + I+QMP P+ W LL ACR+ G++ AA L + +P++
Sbjct: 526 IDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNP 585
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
+VL+ +++A+ +W EV LR M+++ +KK S I+Y + F D+ +P+
Sbjct: 586 ASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSG 645
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
+Y+K++ + ++ GY PD+S LHDV D ++ HML+ HSEKLA+AFG++ + E +
Sbjct: 646 TIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPI 705
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+V KNLRVC DCH+A +FIS I R I+VRDA RFH F G CSC D+W
Sbjct: 706 RVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 187/419 (44%), Gaps = 76/419 (18%)
Query: 132 VHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
VH ++RT +YV L+ YA+ G+ ++FD M +L + +++A A
Sbjct: 31 VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90
Query: 191 KPEEALILFQKTQQEGLLS--------------------------------------DSV 212
+ LF Q +S +
Sbjct: 91 LLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRI 150
Query: 213 TIVSVASAVGQLGDVLKAQAVH---------GYAICNAFLEDL----------------- 246
T+ + A LGD + VH YA + L D+
Sbjct: 151 TMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEM 210
Query: 247 -----CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
+ N+++ RC VE+AR VF+ M RD I+W +M+TG QNG SEAL +F
Sbjct: 211 VVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFR 270
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
M+ + T +++AC L + + G++ H Y I + + + +A++DMY+KC
Sbjct: 271 RMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCR 330
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+ AE +F + + +N+ SW +I GYG +G G +A+ FS+M +G+KP+ T S+
Sbjct: 331 SIRLAEAVFRRM--TCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSV 388
Query: 422 LSACSHAGLIDEGRK--CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
+S+C++ ++EG + C A ++ L +P + + +V + G+ G + +A + +MP
Sbjct: 389 ISSCANLASLEEGAQFHCMALVSGL--RPYITVSSALVTLYGKCGSIEDAHRLFDEMPF 445
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 130/318 (40%), Gaps = 70/318 (22%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY-----IQNGQASEALLL 299
+L +N++++ A + +F M +RD +S+N+++ G+ + LL
Sbjct: 75 NLFTRNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALL 134
Query: 300 FDE--MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
+E + + +P+ +T +V A + LG R LGR+ H I+ A + ++DMY
Sbjct: 135 REEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMY 194
Query: 358 AKCGDLDTAENMFNDIHPS-----------------------------ERNVSSWNVLIA 388
AK G + A+ +F+++ +R+ +W ++
Sbjct: 195 AKMGLIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVT 254
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
G +G +AL+ F +M EGV D TF SIL+AC +EG++ A +
Sbjct: 255 GLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDG 314
Query: 449 EVKHYACMVDM-------------------------------LGRAGCLYEAFDMIKQMP 477
+ + +VDM G+ GC EA + +M
Sbjct: 315 NIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ 374
Query: 478 ---LPPNDSVWGALLLAC 492
+ PND G+++ +C
Sbjct: 375 TDGIKPNDFTLGSVISSC 392
>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/542 (38%), Positives = 327/542 (60%), Gaps = 8/542 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L++ A N +EG H IIR G +D+ L++MY+KCG + K+FDEM VR
Sbjct: 53 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
LVSW M+ ++ Q E+AL+LF + Q+EG+ T+ SV A V + + +HG
Sbjct: 113 LVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHG 172
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+A+ A ++ + +++ +YA+CG V+ A LVF+ M +R ++W+SM+ GY+QN E
Sbjct: 173 FALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEE 232
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL+LF Q + N T +SAC + G++ + + + + + ++++D
Sbjct: 233 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLID 292
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MYAKCG ++ A +F+ + E+NV WN +++G+ H +A+ +F +M + G+ P+
Sbjct: 293 MYAKCGIIEEAYIVFSSV--EEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNE 350
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
IT+ S+L+ACSH GL+++GRK F M ++ +V P V HY+CMVD+LGRAG L+EA D+I
Sbjct: 351 ITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLID 410
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
+MP S+WG+LL +CRI+ E+AA +LF++EP + G VL+SNIYAA+N+W E
Sbjct: 411 RMPFDATASMWGSLLASCRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEE 470
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V + R +K KK S IE + F +R +P E+Y K+E + E+K GY
Sbjct: 471 VARARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGY 530
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
LHDVE+ ++ +L +HSEKLA+ FGIM L A +++ KNLR+C DCHS +
Sbjct: 531 KAKTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKL 590
Query: 650 IS 651
S
Sbjct: 591 AS 592
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 192/338 (56%), Gaps = 4/338 (1%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ G +AR LF+ + S WNTM+ ++ NG + L L+ M++ GIS + +
Sbjct: 92 YSKCGLVESARKLFDEMPVRSLVS--WNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEF 149
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T V+ ACA+ + E K +HG ++T S+ +V AL+D+YAKCG D VF+ M
Sbjct: 150 TVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECM 209
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
R V+W+ M+ Y Q E EEAL+LF + Q GL + TI S SA +++ +
Sbjct: 210 PERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGK 269
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
V ++ + +S++ MYA+CG +E+A +VF +E+++++ WN+ML+G+ ++
Sbjct: 270 QVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHV 329
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN-SNMKIDATLR 350
++ EA++ F++MQ PN +T + +++AC++LG + GRK+ +I N+ +
Sbjct: 330 RSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHY 389
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ ++D+ + G L A+++ + + P + S W L+A
Sbjct: 390 SCMVDILGRAGLLHEAKDLIDRM-PFDATASMWGSLLA 426
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 326/556 (58%), Gaps = 13/556 (2%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
V+G + + ++S + L++ Y + G + KVFDEM R L +W MI Q E
Sbjct: 16 VYGRMRKKNYMSSN----ILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 71
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EE L LF++ G D T+ SV S L V Q +HGY I DL + +S
Sbjct: 72 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 131
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ MY R G ++ +V M R+L++WN+++ G QNG L L+ M+ S C+PN
Sbjct: 132 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 191
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T + ++S+C+ L R G++ H I + ++++ MY+KCG L A F+
Sbjct: 192 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITFTSILSACSHAGL 430
+ + + W+ +I+ YG HG G +A+E F+ M E+ ++ + + F ++L ACSH+GL
Sbjct: 252 E--REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGL 309
Query: 431 IDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
D+G + F M K KP +KHY C+VD+LGRAGCL +A +I+ MP+ + +W LL
Sbjct: 310 KDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLL 369
Query: 490 LACRIH--GEIAANY---LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
AC IH E+A + Q++P + +VL++N++A++ +WR+V ++R+ M++K +KK
Sbjct: 370 SACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKK 429
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
A S E+ ++ F DR KE+Y ++ + +E+K+ GY PD + LHD+++E+
Sbjct: 430 EAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEE 489
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L HSEKLAVAF +M L A +++ KNLRVC+DCH AF++IS I R+I +RD +
Sbjct: 490 KESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGS 549
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 550 RFHHFINGKCSCGDYW 565
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 183/389 (47%), Gaps = 6/389 (1%)
Query: 23 ASLRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
+ L S++ G + + ++ + I+I Y G+ AR +F+ + + K + WN M
Sbjct: 5 SKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTT--WNAM 62
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I E L L+ M G S + YT V A + G+ +HG I+ G
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D V ++L MY + G+ DG V M VR+LV+W +I Q PE L L++
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G + +T V+V S+ L + Q +H AI + + +S+++MY++CG
Sbjct: 183 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 242
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVS 320
+ A F E D + W+SM++ Y +GQ EA+ LF+ M + ++ + N V L L+
Sbjct: 243 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 302
Query: 321 ACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC++ G + G + ++ K V+D+ + G LD AE + + P + +
Sbjct: 303 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM-PIKTD 361
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ W L++ +H + A F ++L+
Sbjct: 362 IVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 142/327 (43%), Gaps = 48/327 (14%)
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA------------------- 293
++MY++ G+ A V+ M K++ +S N ++ GY++ G
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 294 ------------SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
E L LF EM P+ T + S L S +G++ HGY I
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+++D + +++ MY + G L E + + RN+ +WN LI G +G L
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM--PVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLG 461
+ M G +P+ ITF ++LS+CS + +G++ A+ K+ V + ++ M
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-IAANYLFQLEPEHTGYFV----L 516
+ GCL +A + ++ +W +++ A HG+ A LF E T +
Sbjct: 239 KCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLK 543
++ +YA S+ +K+KGL+
Sbjct: 298 LNLLYACSH---------SGLKDKGLE 315
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/604 (33%), Positives = 335/604 (55%), Gaps = 42/604 (6%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L+ CA +H II+ GF S + L+D+Y KCG ++FDEM RD
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 177 VSWTVMITAYEQAEKPEEALILFQKT-QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
VSW ++TA+ +A P L + +GL D + A LG + + VH
Sbjct: 70 VSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHA 129
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + F +D +++S++ MY +CG + AR VFD + ++ +SW SM++GY ++G+ E
Sbjct: 130 RFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCE 189
Query: 296 AL-------------------------------LLFDEMQNSDCK-PNPVTALILVSACT 323
A+ LF+EM+ +P+ +V C
Sbjct: 190 AMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCA 249
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L +LG++ HG +I + + NA++DMYAKC D+ A+++F + ++V SW
Sbjct: 250 NLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRM--PRKDVISW 307
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
+I G HG +AL + +M+ +KP+ +TF +L ACSHAGL+ GR+ F MT
Sbjct: 308 TSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTT 367
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA--- 499
S+ P ++HY C++D+L R+G L EA +++ ++P P++ W +LL AC H +
Sbjct: 368 DYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGV 427
Query: 500 --ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
A+ + L+PE ++L+SN+YA + W V K+R+ M + ++K +S I++GKD
Sbjct: 428 RIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDS 487
Query: 558 QGFHTADRVN-PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
Q FH + + P E+ ++ + E++ GY+P+ S L+D+E +++E L +HSE+L
Sbjct: 488 QVFHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERL 547
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
AVA+G++ P ++++ KNLR+C DCH+ +FIS I +R+I+VRDA R+HHF+ G CSC
Sbjct: 548 AVAYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSC 607
Query: 677 NDYW 680
ND+W
Sbjct: 608 NDFW 611
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 226/454 (49%), Gaps = 46/454 (10%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
++HS + +G +L L ++ Y G A LF+ + N S W +++ A+
Sbjct: 24 ELHSQIIKAGFDKSSL-LSNTLLDVYGKCGLIPQALQLFDEMPNRDHVS--WASILTAHN 80
Query: 87 NNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
TL + +TM G+ + + F +++AC+S + GK VH + + F D
Sbjct: 81 KALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDE 140
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL--------- 196
V+++L+DMY KCGQ DD VFD + ++ VSWT MI+ Y ++ + EA+
Sbjct: 141 VVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGRKCEAMDLFLQAPVR 200
Query: 197 ----------------------ILFQKTQQEGL-LSDSVTIVSVASAVGQLGDVLKAQAV 233
LF + ++EG+ + D + + SV L + + +
Sbjct: 201 NLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQI 260
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
HG I F L I N++V MYA+C ++ A+ +F M ++D+ISW S++ G Q+G+A
Sbjct: 261 HGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTSIIVGTAQHGKA 320
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN-- 351
EAL L+DEM S KPN VT + L+ AC++ G GR+ + ++ I+ +L++
Sbjct: 321 EEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRS-MTTDYSINPSLQHYT 379
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
++D+ ++ G LD AEN+ + I P + + +W L++ H + + ++L+ +
Sbjct: 380 CLLDLLSRSGHLDEAENLLDKI-PFKPDEPTWASLLSACMRHNNLEMGVRIADRVLD--L 436
Query: 412 KPD----HITFTSILSACSHAGLIDEGRKCFADM 441
KP+ +I +++ + G + + RK + M
Sbjct: 437 KPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSM 470
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/716 (32%), Positives = 391/716 (54%), Gaps = 53/716 (7%)
Query: 12 YDQLLKSCNFLASLRQIHS--SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIH 69
+ Q LK+C LR S +L + + +L ++ Y+ + AR +F+ H
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 70 NDKSYSF-----------------------------LWNTMIRAYANNGHCVETLELYST 100
+ +SF +NT+I AYA G +L+
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA--ALVDMYAKC 158
MR + + + +T ++ AC N ++ + +H + TG DSYV AL+ Y+K
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGL--DSYVSVGNALITSYSKN 186
Query: 159 GQTDDGCKVFDEMSV-RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
G + ++F +S RD VSW M+ AY Q + +AL L+ + GL+ D T+ SV
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN-VEKARLVFDMMEKRD 276
+A + D+L H I + + ++ + + ++ +Y++CG + R VFD + D
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306
Query: 277 LISWNSMLTGY-IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
L+ WN+M++GY + + EAL F ++Q +P+ + + ++SAC+ + S GR+ H
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVH 366
Query: 336 GYIINSNMKID-ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
G + ++ + ++ NA++ MY+KCG+L A+ +F+ + E N S+N +IAGY HG
Sbjct: 367 GLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTM--PEHNTVSYNSMIAGYAQHG 424
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHY 453
G ++L F +MLE G P +ITF S+L+AC+H G +++G+ F M K ++PE H+
Sbjct: 425 MGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHF 484
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEP 508
+CM+D+LGRAG L EA +I+ +P P W ALL ACRIHG + AAN L QL+P
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDP 544
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
+ +V+++NIY+ + + ++ +R+ M+++G+KK S IE + I F D +P
Sbjct: 545 LNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHP 604
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE----DREHMLNYHSEKLAVAFGIMN 624
K++ + +E M +IK GY P++ AL +D + E L +HSEKLAV+FG+M+
Sbjct: 605 MIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMS 664
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ V KNLR+C DCH+A ++IS + +R+I VRD++RFH F+ G CSC YW
Sbjct: 665 TREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 224/512 (43%), Gaps = 88/512 (17%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
SS + F LK C ++ + GK +H I++ + +Y+ + +Y+KC +
Sbjct: 4 FSSLLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAAR 63
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+VFD ++ S+ +I+AY + E A LF + Q DSV+ ++ +A + G
Sbjct: 64 RVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ----PDSVSYNTLIAAYARRG 119
Query: 226 DVLKA---------------------------------QAVHGYAICNAFLEDLCIQNSI 252
D A + +H ++ + + N++
Sbjct: 120 DTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNAL 179
Query: 253 VAMYARCGNVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ Y++ G +++AR +F + E RD +SWNSM+ Y+Q+ + S+AL L+ EM +
Sbjct: 180 ITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVD 239
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD--LDTAENM 369
T +++A T + G +FH +I S ++ + + ++D+Y+KCG LD +
Sbjct: 240 IFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD-CRKV 298
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGH-GRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
F++I S ++ WN +I+GY ++ +ALE F Q+ G +PD + ++SACS+
Sbjct: 299 FDEI--SNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNM 356
Query: 429 GLIDEGRKCFADMTKLSVKP-EVKHYACMVDMLGRAGCLYEAFDMIKQMP---------- 477
+GR+ KL + + ++ M + G L +A + MP
Sbjct: 357 SSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSM 416
Query: 478 ------------------------LPPNDSVWGALLLAC----RIH-GEIAANYL---FQ 505
P + + ++L AC R+ G+I N + F
Sbjct: 417 IAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFG 476
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+EPE G+F M ++ + K E +L E +
Sbjct: 477 IEPE-AGHFSCMIDLLGRAGKLSEAERLIETI 507
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/684 (33%), Positives = 370/684 (54%), Gaps = 18/684 (2%)
Query: 7 STEGFYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
+T + QLL+ C ++ ++ I + + SG + G+K++ GE AR
Sbjct: 45 TTTHTFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELS--GSKLVDASLKCGEIGYARQ 102
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
LF+ + + + WN++I Y + E +E+Y M + + + YT V KA +
Sbjct: 103 LFDGM--PERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDL 160
Query: 124 SLILEGKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
SL E + HG + G +S+ +V +ALVDMY K G+T + V D + +D+V T +
Sbjct: 161 SLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITAL 220
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I Y Q + EA+ FQ E + + T SV + G L D+ + +HG + + F
Sbjct: 221 IVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF 280
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
L Q S++ MY RC V+ + LVF ++ + ++W S+++G +QNG+ AL+ F +
Sbjct: 281 ESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRK 340
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M KPN T + C+ L + GR+ HG + D + ++++Y KCG
Sbjct: 341 MMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGC 400
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
D A +F+ + SE +V S N +I Y +G GR+ALE F +M+ G++P+ +T S+L
Sbjct: 401 SDMARLVFDTL--SEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVL 458
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
AC+++GL++EG + F K + HYACMVDMLGRAG L EA +I ++ P+
Sbjct: 459 LACNNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVT-NPDL 517
Query: 483 SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+W LL AC++H E + ++ P G +L+SN+YA++ KW+ V +++ M
Sbjct: 518 VLWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKM 577
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVN-PYWKEVYKKVESMAVEIKMAGYMPDLSCA 596
K LKK A S +E K+ F D + P +++ + +E + + K GY+ D SC
Sbjct: 578 KEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCV 637
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
D+E+ +E L+ HSEKLA+AF + +++ KNLRVC DCHS + +S I +R
Sbjct: 638 FQDMEETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRIIKR 696
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
+II RD+ RFHHF G+CSC DYW
Sbjct: 697 EIICRDSKRFHHFRDGSCSCGDYW 720
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/439 (43%), Positives = 289/439 (65%), Gaps = 8/439 (1%)
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N++V MYA+ G + A VF+ M +D+ISW S++TG + NG EAL LF EM+
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
P+ + ++SAC L + G++ H + S + ++ N+++ MYAKCG ++ A
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + ++V +W LI GY +G GR++L F++ M+ GVKPD ITF +L ACSH
Sbjct: 124 KVFDSMEI--QDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181
Query: 428 AGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL++ GR F M ++ +KP +HYACM+D+LGR+G L EA +++ QM + P+ +VW
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241
Query: 487 ALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
ALL ACR+HG + AAN LF+LEP++ +VL+SN+Y+A+ KW E K R MK +G
Sbjct: 242 ALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRG 301
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
+ K S IE + F + DR +P E+Y KV+ + + IK AGY+PD++ ALHD++
Sbjct: 302 VSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMD 361
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
+E +E L YHSEKLAVAFG++ + P A +++ KNLR+C DCH+A +++S ++ R +I+R
Sbjct: 362 EEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILR 421
Query: 662 DANRFHHFEGGTCSCNDYW 680
D+N FHHF G CSC+DYW
Sbjct: 422 DSNCFHHFREGACSCSDYW 440
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 164/332 (49%), Gaps = 36/332 (10%)
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V ALVDMYAK G D VF++M+ +D++SWT ++T EEAL LF + + G
Sbjct: 4 VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ D + I +V SA +L + + VH + + L + NS+V+MYA+CG +E A
Sbjct: 64 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VFD ME +D+I+W +++ GY QNG+ E+L +++M S KP+ +T + L+ AC++ G
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ GR + + E ++ I P + + +
Sbjct: 184 LVEHGRSY----------------------------FQSMEEVYG-IKPGPEH---YACM 211
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I G G +A E +QM V+PD + ++L+AC G ++ G + ++ +L
Sbjct: 212 IDLLGRSGKLMEAKELLNQM---AVQPDATVWKALLAACRVHGNVELGERAANNLFELEP 268
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
K V Y + ++ AG EA + M L
Sbjct: 269 KNAVP-YVLLSNLYSAAGKWEEAAKTRRLMKL 299
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 20/257 (7%)
Query: 37 LINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLE 96
L+N AL + Y G + A +F + + S W +++ +NG E L
Sbjct: 3 LVNNAL------VDMYAKXGYFDYAFDVFEKMTDKDVIS--WTSLVTGCVHNGSYEEALR 54
Query: 97 LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA 156
L+ MR GI + VL ACA +++ GK VH + +++G S V +LV MYA
Sbjct: 55 LFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYA 114
Query: 157 KCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVS 216
KCG +D KVFD M ++D+++WT +I Y Q + E+L + G+ D +T +
Sbjct: 115 KCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIG 174
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS------IVAMYARCGNVEKARLVFD 270
+ A G V HG + + E I+ ++ + R G + +A+ + +
Sbjct: 175 LLFACSHAGLV-----EHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLN 229
Query: 271 MME-KRDLISWNSMLTG 286
M + D W ++L
Sbjct: 230 QMAVQPDATVWKALLAA 246
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 326/556 (58%), Gaps = 13/556 (2%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
V+G + + ++S + L++ Y + G + KVFDEM R L +W MI Q E
Sbjct: 14 VYGRMRKKNYMSSN----ILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 69
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EE L LF++ G D T+ SV S L V Q +HGY I DL + +S
Sbjct: 70 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 129
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ MY R G ++ +V M R+L++WN+++ G QNG L L+ M+ S C+PN
Sbjct: 130 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 189
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T + ++S+C+ L R G++ H I + ++++ MY+KCG L A F+
Sbjct: 190 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 249
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITFTSILSACSHAGL 430
+ + + W+ +I+ YG HG G +A+E F+ M E+ ++ + + F ++L ACSH+GL
Sbjct: 250 E--REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGL 307
Query: 431 IDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
D+G + F M K KP +KHY C+VD+LGRAGCL +A +I+ MP+ + +W LL
Sbjct: 308 KDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLL 367
Query: 490 LACRIH--GEIAANY---LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
AC IH E+A + Q++P + +VL++N++A++ +WR+V ++R+ M++K +KK
Sbjct: 368 SACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKK 427
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
A S E+ ++ F DR KE+Y ++ + +E+K+ GY PD + LHD+++E+
Sbjct: 428 EAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEE 487
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L HSEKLAVAF +M L A +++ KNLRVC+DCH AF++IS I R+I +RD +
Sbjct: 488 KESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGS 547
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 548 RFHHFINGKCSCGDYW 563
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 183/389 (47%), Gaps = 6/389 (1%)
Query: 23 ASLRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
+ L S++ G + + ++ + I+I Y G+ AR +F+ + + K + WN M
Sbjct: 3 SKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTT--WNAM 60
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I E L L+ M G S + YT V A + G+ +HG I+ G
Sbjct: 61 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 120
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D V ++L MY + G+ DG V M VR+LV+W +I Q PE L L++
Sbjct: 121 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 180
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G + +T V+V S+ L + Q +H AI + + +S+++MY++CG
Sbjct: 181 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 240
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVS 320
+ A F E D + W+SM++ Y +GQ EA+ LF+ M + ++ + N V L L+
Sbjct: 241 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 300
Query: 321 ACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
AC++ G + G + ++ K V+D+ + G LD AE + + P + +
Sbjct: 301 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM-PIKTD 359
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ W L++ +H + A F ++L+
Sbjct: 360 IVIWKTLLSACNIHKNAEMAQRVFKEILQ 388
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 351/615 (57%), Gaps = 58/615 (9%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC---------- 165
+L++C+S S + K++HG ++RT +SD +V + L+ + A C DD
Sbjct: 18 LLQSCSSFS---DLKIIHGFLLRTHLISDVFVASRLLAL-ALC--VDDSTFHKPTNLLGY 71
Query: 166 --KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
+F ++ +L + V+I + +P +A + + + + D++T + A +
Sbjct: 72 AYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTE 131
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA-------------------------- 257
+ V+ + H + F D+ ++NS+V MYA
Sbjct: 132 MECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSM 191
Query: 258 -----RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+CG VE AR +FD M R+L +W+ M+ GY +N +A+ LF+ M+ N
Sbjct: 192 VAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANE 251
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+ ++S+C +LG+ + G + H Y++ S+M ++ L A++DMY +CG+++ A +F +
Sbjct: 252 TVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEE 311
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ +++ SW+ +I G +HGH KA+ +FSQM+ G P IT T++LSACSH GL+D
Sbjct: 312 L--PDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVD 369
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G + + +M + ++P ++HY C+VDMLGRAG L EA + I +MP+ PN + GALL A
Sbjct: 370 KGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGA 429
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C+I+ E N L +++PEH+GY+VL+SNIYA + +W ++ LR+ MK K +KKP
Sbjct: 430 CKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPP 489
Query: 547 AFSVIEYGKDIQGFHTAD-RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
+S+IE I F D + +P ++ + E + +I++ GY + A DV++E++
Sbjct: 490 GWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDEEEK 549
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E ++ HSEKLA+A+G+M +++ KNLRVC DCH+A + IS +Y R+ IVRD NR
Sbjct: 550 ETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRDRNR 609
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G CSC DYW
Sbjct: 610 FHHFRNGLCSCRDYW 624
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 220/460 (47%), Gaps = 58/460 (12%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQAL----HLGAKIIIKYTTYGEPNT----ARSLFN 66
LL+SC+ + L+ IH L + LI+ L + + +T+ +P A +F+
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFS 77
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
I N F++N +IR ++ + Y+ M +S I ++ TFPF++KA +
Sbjct: 78 QIQNPNL--FVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECV 135
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+ G+ H I+R GF +D YV+ +LV MYA CG ++F +M RD+VSWT M+ Y
Sbjct: 136 VVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGY 195
Query: 187 ------EQA-----EKP--------------------EEALILFQKTQQEGLLSDSVTIV 215
E A E P E+A+ LF+ ++EG++++ +V
Sbjct: 196 CKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMV 255
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
SV S+ LG + + H Y + + +L + ++V MY RCG +EKA VF+ + +
Sbjct: 256 SVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDK 315
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
D +SW+S++ G +G A +A+ F +M P +T ++SAC++ G G +
Sbjct: 316 DSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLE-- 373
Query: 336 GYIINSNMKIDATLR------NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
I NMK D + ++DM + G L AEN + P + N L+
Sbjct: 374 ---IYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM-PVKPNAPILGALLGA 429
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS---ACS 426
++ + A + ++E VKP+H + +LS AC+
Sbjct: 430 CKIYKNTEVAERVGNMLIE--VKPEHSGYYVLLSNIYACA 467
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/575 (34%), Positives = 339/575 (58%), Gaps = 15/575 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG--CKVFDEMSV 173
++K+C+ + +L+ +H IIRT + + ++ + A D G +VF ++
Sbjct: 74 LIKSCSKKTHLLQ---IHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMK 130
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+ VMI AY + PE+ L+++ ++ G+ + ++ V + ++ ++ +
Sbjct: 131 PSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQI 190
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H + + D + +++ +Y+ C E+A VFD + + D +SWN +++ I N +
Sbjct: 191 HARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRT 250
Query: 294 SEALLLFDEMQNS--DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+AL +FD MQ++ +P+ VT L+L+ AC LG+ + G + H YI L N
Sbjct: 251 RDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALNLCN 310
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
+++ MY++CG L+ A ++F + ERNV SW+ +I+G+ MHG+GR+A+E F QM + GV
Sbjct: 311 SLITMYSRCGRLEKAYSIFKRM--DERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGV 368
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAF 470
PD T T +LSACSH GL+D+G F M+K+ ++P + HY CMVD+LGRAG L +A+
Sbjct: 369 SPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAY 428
Query: 471 DMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASN 525
+I M + P+ ++W LL ACRIH GE +L +L+ + G +VL+ NIY++
Sbjct: 429 QLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVG 488
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
W +V LR+ MK KG++ S IE + F D ++P E+Y+ ++ + ++K
Sbjct: 489 NWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLK 548
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
+AGY+ +LS LH++ E++ + L+YHSEKLA+AFG++ P ++V KNLR+C DCH+
Sbjct: 549 IAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHN 608
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +S Y R++++RD RFHHF G CSCN YW
Sbjct: 609 FAKVLSGAYNREVVIRDRTRFHHFREGQCSCNGYW 643
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 234/487 (48%), Gaps = 34/487 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL------FNSI 68
L+KSC+ L QIH+ + + LI I +++ + + +R + F+ I
Sbjct: 74 LIKSCSKKTHLLQIHAHIIRTSLIQNHF-----ISLQFLSRAALSPSRDMGYSSQVFSQI 128
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
K +N MIRAY+ + + LY MRR G+ N + FV+K+C S ++
Sbjct: 129 M--KPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMG 186
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G +H I+R G SD+ + L+D+Y+ C + ++ CKVFDE+ D VSW V+I+
Sbjct: 187 GLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIH 246
Query: 189 AEKPEEALILFQKTQQ--EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ +AL +F Q +G D VT + + A LG + + VH Y + + L
Sbjct: 247 NRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGAL 306
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ NS++ MY+RCG +EKA +F M++R+++SW++M++G+ +G EA+ F++MQ
Sbjct: 307 NLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQL 366
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLD 364
P+ T ++SAC++ G G F ++ I+ + + ++D+ + G LD
Sbjct: 367 GVSPDDQTLTGVLSACSHCGLVDDGLMFFDR-MSKVFGIEPNIHHYGCMVDLLGRAGLLD 425
Query: 365 TAENMFND--IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP--DHITFTS 420
A + I P + + W L+ +H H ++E + D++ +
Sbjct: 426 QAYQLIMSMVIKP---DSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLN 482
Query: 421 ILSACSHAGLIDEGRKCFADM--------TKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
I S+ + + + RK + + + +K +V + + R +YE D
Sbjct: 483 IYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEMLDE 542
Query: 473 I-KQMPL 478
I KQ+ +
Sbjct: 543 IGKQLKI 549
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/540 (39%), Positives = 315/540 (58%), Gaps = 40/540 (7%)
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
+ +I A ++ P EAL L+ Q GL D +T V A + VH + +
Sbjct: 134 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 193
Query: 239 CNAFLEDLCIQNSIVAMYAR-----------------------------CGNVE--KARL 267
+ F D I +S++ +YA +VE AR+
Sbjct: 194 KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARM 253
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
VFD M RD+ISWN+M+ GY G+ +EAL LFD+M+ KP T + L+SAC +LG+
Sbjct: 254 VFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 313
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
G H YI ++ +++++ + A++DMYAKCG + A +FN + ++V +WN +I
Sbjct: 314 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM--ESKDVLAWNTII 371
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSV 446
AG +HG+ ++A + F +M E GV+P+ ITF +ILSACSHAG++DEG+K M+ +
Sbjct: 372 AGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGI 431
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAAN 501
+P+V+HY C++D+L RAG L EA ++I MP+ PN S GALL CRIHG E+
Sbjct: 432 EPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGK 491
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
L L+P H+G ++L+SNIYAA+ KW + K+R MK G+ K SVIE + F
Sbjct: 492 RLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFV 551
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMA-GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D +P ++Y+K+ + +K A GY D L D+E+ED+EH L HSEKLA+A+
Sbjct: 552 AGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAY 611
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
G+++L + +++ KNLRVC DCH + IS +Y R+IIVRD NRFHHFE G CSC D+W
Sbjct: 612 GLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 211/415 (50%), Gaps = 41/415 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTT--SGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
L C L L+Q+H+ + T + + + + T+ A+++F+ + N
Sbjct: 73 LFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLA--YAKTIFHHLQNPP 130
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
L+N++IRA +++ +E L LY TM +SG+ + T+PFV+KAC +S+ G +V
Sbjct: 131 PS--LYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLV 188
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAK-------------CGQTD--------DGC------ 165
H ++++GF DSY+ ++L+ +YA C D DG
Sbjct: 189 HTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEM 248
Query: 166 ----KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
VFD M RD++SW MI Y KP EAL LF + + G+ T+VS+ SA
Sbjct: 249 GHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSAC 308
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
LG + K +H Y N + + ++V MYA+CG + A VF+ ME +D+++WN
Sbjct: 309 AHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWN 368
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+++ G +G EA LF EM+ + +PN +T + ++SAC++ G G+K ++S
Sbjct: 369 TIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD-CMSS 427
Query: 342 NMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
+ I+ + + V+D+ A+ G L+ A + + P E N S+ L+ G +HG
Sbjct: 428 SYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTM-PMEPNPSALGALLGGCRIHG 481
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/682 (33%), Positives = 380/682 (55%), Gaps = 19/682 (2%)
Query: 15 LLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L C LA + R +H SG + A + ++ Y GE A F
Sbjct: 171 VLPMCAALAWPETGRAVHGLAVKSGW-DAAPRVSNVLVDMYAKCGEMADAECAFLEAPPG 229
Query: 72 KSYSFL-WNTMIRAYANNGHCVETLELYSTMR--RSGISSNSYTFPFVLKACASNSLILE 128
+ + WN M+ YA NG L M+ G+ ++ T VL C+ + +
Sbjct: 230 AGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAK 289
Query: 129 GKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+ +H ++R G L+ V AL+ Y +CG C+VFD + + + SW +I A+
Sbjct: 290 LRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHA 349
Query: 188 QAEKPEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q + A+ LF++ T G D +I S+ A G L +L +A HG+ + N +D
Sbjct: 350 QNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDS 409
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
I+ S++++Y +CG AR++FD +E++D +SWN+M+ GY QNG E+L LF EMQ+
Sbjct: 410 FIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSK 469
Query: 307 DCK--PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
P+ + A + AC+ L + +LG++ H + + +++ D+ L ++++DMY+KCG +D
Sbjct: 470 KGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVD 529
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
A F+ + ++ SW V+I GY ++G G++A+ + +M EG++PD T+ +L A
Sbjct: 530 DARVFFDRL--KAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMA 587
Query: 425 CSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
C HAG++++G F +M L ++ +++HYAC++ ML RAG +A +++ MP P+
Sbjct: 588 CGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAK 647
Query: 484 VWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
+ ++L AC +HGE+ A+ L +LEP ++VL SN+YA S +W E+ K+R+ ++
Sbjct: 648 ILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLR 707
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH 598
+ G+ K S I+ + F + P +V K S+ +I+ AGY PD + LH
Sbjct: 708 DAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLH 767
Query: 599 DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
++E+E++ L +HSEK A+AFG++ V+V KN+R+C DCH+A + IS + R+I
Sbjct: 768 ELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREI 827
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
+VRD RFHHF G CSC DYW
Sbjct: 828 VVRDKKRFHHFRDGLCSCGDYW 849
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 177/363 (48%), Gaps = 22/363 (6%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRS--GISSNSYTFPFVLKACASNSLILEGKVVHGD 135
WN ++ + G + L + + + G++ + +T P LK+C + +G+ VH
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGD----DGRQVHAV 88
Query: 136 IIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+ G D +V +LV MY +CG+ DD KVF+ M+ R+LVSW ++ A P
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVAD---PRR 145
Query: 195 ALILFQKTQQE---GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
L LF+ ++ D T+V+V L +AVHG A+ + + + N
Sbjct: 146 GLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNV 205
Query: 252 IVAMYARCGNVEKARLVF---DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
+V MYA+CG + A F R+++SWN ML GY +NG+A A L EMQ +
Sbjct: 206 LVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEER 265
Query: 308 -CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATL-RNAVMDMYAKCGDLDT 365
+ +T L ++ C+ L R+ H +++ + + + NA++ Y +CG L
Sbjct: 266 GVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLH 325
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITFTSILSA 424
A +F+ I + VSSWN LI + +G A+E F +M G KPD + S+L A
Sbjct: 326 ACRVFDGI--CSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLA 383
Query: 425 CSH 427
C +
Sbjct: 384 CGN 386
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 26/274 (9%)
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
L WN +L + G+ ++AL + + + P+ T + +C RQ+
Sbjct: 30 LPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDDGRQV---- 85
Query: 335 HGYIINSNMKI---DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ + + + + D + N+++ MY +CG +D AE +F + + RN+ SWN L+A
Sbjct: 86 --HAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGM--AGRNLVSWNALMAAV- 140
Query: 392 MHGHGRKALEFFSQMLEE---GVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKP 448
R+ LE F LE+ PD T ++L C+ + GR K
Sbjct: 141 --ADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDA 198
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV--WGALLLACRIHGEIAANY--LF 504
+ +VDM + G + +A + P +V W +L +GE A + L
Sbjct: 199 APRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLR 258
Query: 505 QLEPEHTGYF---VLMSNIYAASNKWREVGKLRE 535
+++ E G + M ++ + E+ KLRE
Sbjct: 259 EMQMEERGVPADEITMLSVLPVCSGLPELAKLRE 292
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/689 (34%), Positives = 371/689 (53%), Gaps = 28/689 (4%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y +L +C + + IH GL Q + L +I Y + AR LF S
Sbjct: 113 YAGVLSACGQIKDFALGKVIHGLAIVCGL-GQQVFLTNLLIDMYCKCERIDHARLLFES- 170
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC--ASNSLI 126
+D+ + WN++I YA G E L+L M +G+ N++T LK+C N+++
Sbjct: 171 -SDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMV 229
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
GK +HG ++ G D V AL+DMYAK G D ++F +++V + MI +
Sbjct: 230 SYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGF 289
Query: 187 EQAEKPE-----EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
Q E + EAL LF + Q++G+ T S+ + + +H + +
Sbjct: 290 IQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHN 349
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
D I ++++ +Y+ G+ E F+ K D++SW +M+ GY QNGQ AL LF
Sbjct: 350 IQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFY 409
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
E+ S KP+ ++SAC + + + G + HGY + + + A ++N+ + MYAK G
Sbjct: 410 ELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSG 469
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+LD+A+ F +I +V SW+V+I HGH + A+ F M G+ P+ ITF +
Sbjct: 470 NLDSAKITFEEI--KNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGV 527
Query: 422 LSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L+ACSH GL++EG + + M K +K VKH C+VD+L RAG L +A + I
Sbjct: 528 LTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGD 587
Query: 481 NDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ +W LL CRI+ +I A L +L+P+ + +VL+ NIY + K+RE
Sbjct: 588 HPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRE 647
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
MK++G++K S IE G ++ F D +P + +YKK+E M + + GY+
Sbjct: 648 LMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQ--- 704
Query: 596 ALHDVEDEDREHM----LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
+ +V +E +N+HSEKLAV+FGI++L P A V+V KNLRVC+DCH+ + IS
Sbjct: 705 KIQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLIS 764
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +R+II+RD+ RFHHF+ G+CSCNDYW
Sbjct: 765 VVEKREIILRDSLRFHHFKEGSCSCNDYW 793
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 217/466 (46%), Gaps = 19/466 (4%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ +GE A+ LF+ + S+ N +I Y G + + L+S R + + + +
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISY--NILISGYGGMGFYHKAIGLFSEARMACLKLDKF 111
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
++ VL AC GKV+HG I G ++ L+DMY KC + D +F+
Sbjct: 112 SYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESS 171
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVS-VASAVGQLGDVLK- 229
D VSW +IT Y + EE L L K GL ++ T+ S + S L +++
Sbjct: 172 DELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSY 231
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
+ +HGY + D+ + +++ MYA+ G + A +F ++++ +N+M+ G+IQ
Sbjct: 232 GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291
Query: 290 NGQ-----ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
A EAL LF +MQ KP+ T ++ C ++ + + G++ H +I N++
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ 351
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
D + + ++++Y+ G + FN + ++ SW +IAGY +G AL F
Sbjct: 352 SDEFIGSTLIELYSLLGSTEDQLKCFNS--TPKLDIVSWTTMIAGYAQNGQFESALALFY 409
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
++L G KPD T++LSAC+ G + K + + M ++G
Sbjct: 410 ELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSG 469
Query: 465 CLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYLFQL 506
L A F+ IK P+ W ++ + HG A LF+L
Sbjct: 470 NLDSAKITFEEIKN----PDVVSWSVMICSNAQHGHAKDAINLFEL 511
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 175/331 (52%), Gaps = 11/331 (3%)
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+ GK+ H +I+T F ++ +++Y+K G+ + K+FD MS R ++S+ ++I+ Y
Sbjct: 26 IHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGY 85
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+A+ LF + + L D + V SA GQ+ D + +HG AI + +
Sbjct: 86 GGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQV 145
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N ++ MY +C ++ ARL+F+ ++ D +SWNS++TGY + G E L L +M ++
Sbjct: 146 FLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHT 205
Query: 307 DCKPNPVTALILVSACTYLGSRQL---GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ N T + +C YL + G+ HGY + + +D + A++DMYAK G L
Sbjct: 206 GLRLNAFTLGSALKSC-YLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYL 264
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK-----ALEFFSQMLEEGVKPDHITF 418
A +F +NV +N +IAG+ K AL+ FSQM +G+KP TF
Sbjct: 265 GDAIQLFRT--SPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTF 322
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
+SI+ C+H + G++ A + K +++ +
Sbjct: 323 SSIIKICNHIEAFEYGKQIHAHICKHNIQSD 353
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 343/586 (58%), Gaps = 18/586 (3%)
Query: 106 ISSNSYTFPFVLKACASNSL--ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+ +N + +K+C S L +L KVV R GF+ D LV Y + G
Sbjct: 30 LDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQ-----LVGCYLRLGHDVC 84
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK--TQQEGLLSDSVTIVSVASAV 221
K+FDEM RDLVSW +I+ Y + + + + G + VT +S+ SA
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
G + + +HG + LE++ + N+ + Y + G++ + +F+ + ++L+SWN
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ ++QNG A + L F+ + +P+ T L ++ +C +G +L + HG I+
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + A++D+Y+K G L+ + +F++I + + +W ++A Y HG GR A++
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEI--TSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
F M+ G+ PDH+TFT +L+ACSH+GL++EG+ F M+K + P + HY+CMVD+L
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GR+G L +A+ +IK+MP+ P+ VWGALL ACR++ G AA LF+LEP +V
Sbjct: 383 GRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV 442
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
++SNIY+AS W++ ++R MK KGL + + S IE+G I F D +P +++ K
Sbjct: 443 MLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQK 502
Query: 576 KVESMAVEIKMA-GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
K++ + ++K GY LHDV ++ +E M+N HSEK+A+AFG++ ++P + +
Sbjct: 503 KLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIR 562
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C DCH + IS I +R+II+RD+ RFHHF G+CSC+DYW
Sbjct: 563 KNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 198/416 (47%), Gaps = 13/416 (3%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+KSC + R +H + S +G +++ Y G A LF+ + S
Sbjct: 41 VKSCVSIELCRLLHCKVVKSVSYRHGF-IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVS 99
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRS--GISSNSYTFPFVLKACASNSLILEGKVVH 133
WN++I Y+ G+ + E+ S M S G N TF ++ AC EG+ +H
Sbjct: 100 --WNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIH 157
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G +++ G L + V A ++ Y K G CK+F+++S+++LVSW MI + Q E
Sbjct: 158 GLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAE 217
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+ L F +++ G D T ++V + +G V AQ +HG + F + CI +++
Sbjct: 218 KGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALL 277
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
+Y++ G +E + VF + D ++W +ML Y +G +A+ F+ M + P+ V
Sbjct: 278 DLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHV 337
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFN 371
T L++AC++ G + G+ + ++ +ID L + ++D+ + G L A +
Sbjct: 338 TFTHLLNACSHSGLVEEGKHYF-ETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIK 396
Query: 372 DIHPSERNVSSWNVLIAG---YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
++ P E + W L+ Y G KA E + LE +++ ++I SA
Sbjct: 397 EM-PMEPSSGVWGALLGACRVYKDTQLGTKAAERLFE-LEPRDGRNYVMLSNIYSA 450
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/575 (34%), Positives = 343/575 (59%), Gaps = 15/575 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC--KVFDEMSV 173
++K+C S +L+ +H II T + D V + A D G ++FD ++
Sbjct: 33 LIKSCTHKSQLLQ---IHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTN 89
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+ + M+ AY + P E L +++ +++G+ +D ++ + +L +L +
Sbjct: 90 PFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 149
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H N D + S++ +Y+ CG E+A +FD + ++D+++WN +++ +N +
Sbjct: 150 HARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 209
Query: 294 SEALLLFDEMQNSD--CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+AL LF+ MQ+ C+P+ VT L+L+ AC L + + G + HGYI ++ L N
Sbjct: 210 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCN 269
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
+++ MY++CG +D A +F+ + +E+NV SW+ +I+G M+GHGR+A+E F +M + GV
Sbjct: 270 SLISMYSRCGRMDKAYEVFDKM--TEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGV 327
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAF 470
+P TFT++LSACSH GL+DEG F M + + P V HY C+VD+LGRAG L +A+
Sbjct: 328 EPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAY 387
Query: 471 DMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASN 525
++I M + P+ ++W LL ACRIHG E +L +L+ + G +VL+ NIY+++
Sbjct: 388 ELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAG 447
Query: 526 KWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK 585
W +V +LR+ MK KG+ + IE + F D +P ++YK+++ + ++K
Sbjct: 448 NWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLK 507
Query: 586 MAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHS 645
+AGY ++S LH +E +D+ + L+ HSEKLA+AFG++ P +++ N+R C DCH+
Sbjct: 508 IAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHN 567
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++IS +Y RK++VRD +RFHHF+ G CSCND+W
Sbjct: 568 FAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 602
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 220/430 (51%), Gaps = 13/430 (3%)
Query: 15 LLKSCNFLASLRQIHSSL-TTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
L+KSC + L QIH+ + TTS + + + L + + +R LF+ + N
Sbjct: 33 LIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTN--P 90
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ +N M+RAY+ + +E L +Y M R G+ ++ + F +K+C +L G +H
Sbjct: 91 FVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIH 150
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
I G +DS + +++D+Y+ CG+ ++ CK+FDE+ +D+V+W V+I+ + ++
Sbjct: 151 ARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTR 210
Query: 194 EALILFQKTQQEGLL--SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+AL LF+ Q L D VT + + A L + + +HGY + + + + NS
Sbjct: 211 DALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNS 270
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+++MY+RCG ++KA VFD M +++++SW++M++G NG EA+ F EMQ + +P
Sbjct: 271 LISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPG 330
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNM-KIDATLRNAVMDMYAKCGDLDTAEN-- 368
T ++SAC++ G G F + M + ++D+ + G LD A
Sbjct: 331 DHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELI 390
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP--DHITFTSILSACS 426
M ++ P + + W L+ +HGHG ++E + D++ +I S+
Sbjct: 391 MSMEVRP---DATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAG 447
Query: 427 HAGLIDEGRK 436
+ + E RK
Sbjct: 448 NWDKVTELRK 457
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/598 (35%), Positives = 337/598 (56%), Gaps = 43/598 (7%)
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD--DGCKVFDEMSVRDLVSWTV 181
+ + E K +H ++ G L+D + V A + +V D L ++
Sbjct: 20 TTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNPTLFTFNS 79
Query: 182 MITAYEQAEKPEEALILFQKTQQEG--LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
MI A+ ++ P + + + L D+ T + QL +VHG A+
Sbjct: 80 MIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVK 139
Query: 240 NAFLEDLCIQNSIVAMYA-------------------------------RCGNVEKARLV 268
F D +Q+ ++ MYA + G+V AR +
Sbjct: 140 YGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKL 199
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
FD M +D I+WN+M++GY+Q GQ+ EAL LF+ MQ K N V+ + ++SAC++LG+
Sbjct: 200 FDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGAL 259
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
GR H YI + +++ TL A++DMYAKCG+++ A +F + E+NV +W+ I
Sbjct: 260 DQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGM--KEKNVYTWSSAIG 317
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVK 447
G M+G G K LE FS M ++ V+P+ ITF S+L CS GL++EGRK F M+K+ ++
Sbjct: 318 GLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIE 377
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANY 502
P ++HY CMVD+ GRAG L EA + I MP+ P+ WGALL AC+I+ GE+A+
Sbjct: 378 PRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRK 437
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
+ +LE ++ G +VL+SNIYA S W V +R+ M KG++K SVIE G ++ F
Sbjct: 438 IVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFV 497
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
D+ +P + E+ + ++ +K++GY+ + + D+E+E++E L HSEK+A+AFG+
Sbjct: 498 GDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKIAIAFGL 557
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++L+P+ +++ KNLRVC DCH A + IS + R+I+VRD NRFHHF G CSC YW
Sbjct: 558 ISLSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSCKGYW 615
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 202/409 (49%), Gaps = 40/409 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
+++ C L L+QIH+ L +GL+N +G + PN + N ++
Sbjct: 15 MVEPCTTLRELKQIHTQLLINGLLNDPQLVGQ--FVASIALNNPNNLHYSNQVLDNSQNP 72
Query: 75 S-FLWNTMIRAYANNGHCVETLELYSTMRRSG--ISSNSYTFPFVLKACASNSLILEGKV 131
+ F +N+MIRA++ + + YS + S ++ ++YTF F+++ A G
Sbjct: 73 TLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSS 132
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTD---------------------DGC----- 165
VHG ++ GF D +VQ+ L+ MYA+ G D C
Sbjct: 133 VHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGD 192
Query: 166 -----KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
K+FD+MS +D ++W MI+ Y Q + EAL LF Q+EG+ + V++VSV SA
Sbjct: 193 VGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSA 252
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
LG + + + H Y N L + +++ MYA+CGN+ KA VF M+++++ +W
Sbjct: 253 CSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTW 312
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
+S + G NG + L LF M+ +PN +T + ++ C+ +G + GRK H ++
Sbjct: 313 SSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRK-HFESMS 371
Query: 341 SNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
I+ L + ++D+Y + G LD A N N + P +V +W L+
Sbjct: 372 KVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSM-PVRPHVGAWGALL 419
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 8/235 (3%)
Query: 56 GEPNTARSLFNSI-HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
G+ AR LF+ + H D WN MI Y G E L L++ M+R G+ N +
Sbjct: 191 GDVGFARKLFDKMSHKD---PIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMV 247
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR 174
VL AC+ + +G+ H I R + AL+DMYAKCG + +VF M +
Sbjct: 248 SVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEK 307
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
++ +W+ I E+ L LF +Q+ + + +T VSV +G V + + H
Sbjct: 308 NVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRK-H 366
Query: 235 GYAICNAFLEDLCIQN--SIVAMYARCGNVEKARLVFDMMEKRDLI-SWNSMLTG 286
++ + + +++ +V +Y R G++++A + M R + +W ++L
Sbjct: 367 FESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNA 421
>gi|297811673|ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319557|gb|EFH49979.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/616 (36%), Positives = 345/616 (56%), Gaps = 53/616 (8%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGF--LSDSYVQAALVDMYAKCGQTDDGCKVFDE-- 170
+L+ A S + G+ +H + +G SY+ AL YA G+ K+FDE
Sbjct: 11 LLLRQSAHRSFLHPGRELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIP 70
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+S +D V WT +++++ + ++ LF + +++ + D V++V + +L D+
Sbjct: 71 LSDKDNVDWTTLLSSFSRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLEDLRFG 130
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNV---------------------------- 262
+ HG A+ FL + + N+++ MY +CG V
Sbjct: 131 EQGHGVAVKMGFLTSVKVCNALMDMYGKCGFVSEVKRIFQALEEKSVVSWTVVLDTLVKW 190
Query: 263 ---EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALIL 318
++ R VFD M +R++++W M+ GY+ G E L L EM N VT +
Sbjct: 191 EGLKRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKID-------ATLRNAVMDMYAKCGDLDTAENMFN 371
+SAC G+ +GR H Y + M + + A++DMYAKCG++D++ +F
Sbjct: 251 LSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFR 310
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +RNV +WN L +G MHG GR ++ F +M+ E VKPD +TFT++LSACSH G++
Sbjct: 311 LMR--KRNVVTWNALFSGLAMHGKGRMVIDMFPEMVRE-VKPDDLTFTALLSACSHLGMV 367
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
DEG +CF + ++P+V HYACMVD+LGRAG + EA ++++MP+PPN+ V G+LL +
Sbjct: 368 DEGWRCFHSLQFYGLEPKVDHYACMVDILGRAGRIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 492 CRIHG--EIAANY---LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C +HG EIA L Q+ P HT Y +LMSN+Y A + LR ++N+G++K
Sbjct: 428 CSVHGKLEIAERIKRELIQMSPGHTEYQILMSNMYVAEGRSDIADGLRGSLRNRGIRKIP 487
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED--ED 604
S I + F + DR +P KEVY K+ + I+ AGY+PD+S + E E+
Sbjct: 488 GLSSIYVNDSVHRFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPDISGLVSPSEGDLEE 547
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L HSEKLAV FG++ P + V KNLR+C DCHSA + +S +Y R+II+RD N
Sbjct: 548 KEQALCCHSEKLAVCFGLLETKPRTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRN 607
Query: 665 RFHHFEGGTCSCNDYW 680
RFH F+GG+CSC+DYW
Sbjct: 608 RFHQFKGGSCSCSDYW 623
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 225/470 (47%), Gaps = 52/470 (11%)
Query: 20 NFLASLRQIHSSLTTSGLINQAL-HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLW 78
+FL R++H+ LTTSGL +L + Y + GE TA+ LF+ I + W
Sbjct: 20 SFLHPGRELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIPLSDKDNVDW 79
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
T++ +++ G V +++L+ MRR + + + + CA + G+ HG ++
Sbjct: 80 TTLLSSFSRFGLLVNSMKLFVEMRRKRVEIDHVSLVCLFGVCAKLEDLRFGEQGHGVAVK 139
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDD-------------------------------GCKV 167
GFL+ V AL+DMY KCG + G +V
Sbjct: 140 MGFLTSVKVCNALMDMYGKCGFVSEVKRIFQALEEKSVVSWTVVLDTLVKWEGLKRGREV 199
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEAL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
FDEM R++V+WT+M+ Y A E L +L + + G + VT+ S+ SA Q G+
Sbjct: 200 FDEMPERNVVAWTLMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGN 259
Query: 227 VLKAQAVHGYAICNAFL-------EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
++ + VH YA+ A + + + + ++V MYA+CGN++ + VF +M KR++++
Sbjct: 260 LVIGRWVHVYALKKAMMMGEEETYDGVMVGTALVDMYAKCGNIDSSIKVFRLMRKRNVVT 319
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG-RKFHGY- 337
WN++ +G +G+ + +F EM + KP+ +T L+SAC++LG G R FH
Sbjct: 320 WNALFSGLAMHGKGRMVIDMFPEMVR-EVKPDDLTFTALLSACSHLGMVDEGWRCFHSLQ 378
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
K+D ++D+ + G ++ AE + ++ P N L+ +HG
Sbjct: 379 FYGLEPKVDHY--ACMVDILGRAGRIEEAEILMREM-PVPPNEVVLGSLLGSCSVHGKLE 435
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
A ++++ + P H + ++S + EGR AD + S++
Sbjct: 436 IAERIKRELIQ--MSPGHTEYQILMSNM----YVAEGRSDIADGLRGSLR 479
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/688 (34%), Positives = 372/688 (54%), Gaps = 29/688 (4%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++ +SLR Q+H++L G + + L +I Y G+ + A +F+ +
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTM-LNNNLIDMYAKCGKLHMAGEVFDGMPER 68
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W ++ + ++G E L L+ MR SG S N +T LKAC + G
Sbjct: 69 NVVS--WTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRA--GVQ 124
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG +RTGF V +LV MY+K T D +VFD + R+L +W MI+ Y A +
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184
Query: 192 PEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF--LEDLCI 248
++L++F++ Q+ D T S+ A LG + VH + +
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAIL 244
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+++ +Y +C + A VFD +E+R+ I W +++ G+ Q GQ EA+ LF +S
Sbjct: 245 AGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGV 304
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+ + +V+ + G++ H Y + +D ++ N+++DMY KCG A
Sbjct: 305 RADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGR 364
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
F ++ P+ RNV SW +I G G HGHGR+A++ F +M EEGV+ D + + ++LSACSH+
Sbjct: 365 RFREM-PA-RNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHS 422
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+DE R+ F+ + + ++P+ +HYACMVD+LGRAG L EA ++I MP+ P VW
Sbjct: 423 GLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQT 482
Query: 488 LLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACR+H ++A + L ++ ++ +V++SNI A + +WRE +R M+ KGL
Sbjct: 483 LLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGL 542
Query: 543 KKPAAFSVIEYGKDIQGFH-TADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDV 600
+K S E K++ F+ D +P ++ + + + ++ GY D CALHDV
Sbjct: 543 RKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDV 602
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEA--------VVQVTKNLRVCNDCHSAFRFISY 652
++E R L HSE+LAV ++ VV+V KNLRVC DCH + +S
Sbjct: 603 DEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSA 662
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ RR ++VRDANRFH F+ G CSC DYW
Sbjct: 663 VVRRVVVVRDANRFHRFQNGACSCRDYW 690
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/649 (34%), Positives = 353/649 (54%), Gaps = 24/649 (3%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y E A +F+S+ S W ++ + NG +L L++ M R GI
Sbjct: 410 LIDMYCKCREQLIAYKVFDSMPERNVVS--WTALMSGHVLNGDLNGSLSLFTEMGRQGIY 467
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N +TF LKAC + + +G +HG ++ GF V +LVDMY+KCG+ ++ KV
Sbjct: 468 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 527
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL--LSDSVTIVSVASAVGQLG 225
F M R L+SW MI Y A AL F Q+ + D T+ S+ A G
Sbjct: 528 FRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTG 587
Query: 226 DVLKAQAVHGYAICNAF--LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ + +HG+ + + F I S+V +Y +CGN+ AR FD ++++ +ISW+S+
Sbjct: 588 MIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSL 647
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ GY Q G EA+ LF +Q + + ++ Q G++ ++
Sbjct: 648 ILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPS 707
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
++ ++ N+++DMY KCG +D AE F ++ ++V SW V+I GYG HG G+KA+ F
Sbjct: 708 GLETSVSNSLVDMYLKCGLVDEAEKCFAEMQL--KDVISWTVMITGYGKHGLGKKAVSIF 765
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGR 462
++ML ++PD + + ++LSACSH+G+I EG + F+ + + +KP V+HYAC+VD+LGR
Sbjct: 766 NKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGR 825
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLM 517
AG L EA ++ MP+ PN +W LL CR+HG+I L +++ ++ +V+M
Sbjct: 826 AGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMM 885
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYW---KEVY 574
SN+Y + W E G RE KGL+K A S +E +++ F + + +P +E
Sbjct: 886 SNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQETL 945
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV----AFGIMNLTPEAV 630
K+VE E GY+ L LHD++DE +E L HSEKLA+ A G +N +
Sbjct: 946 KEVERRLRE--ELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKT- 1002
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
++V KNLRVC DCH + +S I + +VRDA RFH FE G CSC DY
Sbjct: 1003 IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 141/269 (52%), Gaps = 14/269 (5%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+L N ++ MY +C A VFD M +R+++SW ++++G++ NG + +L LF EM
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMG 462
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
PN T + AC L + + G + HG+ + ++ + N+++DMY+KCG ++
Sbjct: 463 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 522
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK--PDHITFTSIL 422
AE +F + R++ SWN +IAGY G+G +AL F M E +K PD T TS+L
Sbjct: 523 EAEKVFRWM--VGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLL 580
Query: 423 SACSHAGLIDEGRKC--FADMTKLSVKPEVKHYACMVDMLGRAGCLY---EAFDMIKQMP 477
ACS G+I G++ F + +VD+ + G L+ +AFD IK+
Sbjct: 581 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKT 640
Query: 478 LPPNDSVWGALLLACRIHGE-IAANYLFQ 505
+ W +L+L G+ + A LF+
Sbjct: 641 MIS----WSSLILGYAQEGDFVEAMGLFK 665
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 23/307 (7%)
Query: 15 LLKSCN---FLASLRQIHSSLTTSGL-INQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
LLK+C+ + + +QIH L SG + + ++ Y G +AR F+ I
Sbjct: 579 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKE 638
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
S W+++I YA G VE + L+ ++ +S+ ++ A +L+ +GK
Sbjct: 639 KTMIS--WSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGK 696
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+ +++ ++ V +LVDMY KCG D+ K F EM ++D++SWTVMIT Y +
Sbjct: 697 QMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHG 756
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
++A+ +F K + + D V ++V SA G + + G + + LE I+
Sbjct: 757 LGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKE-----GEELFSKLLETQGIKP 811
Query: 251 S------IVAMYARCGNVEKARLVFDMME-KRDLISWNSMLT-----GYIQNGQASEALL 298
+V + R G +++A+ + D M K ++ W ++L+ G I+ G+ +L
Sbjct: 812 RVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 871
Query: 299 LFDEMQN 305
L + +N
Sbjct: 872 LRIDGKN 878
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/667 (33%), Positives = 366/667 (54%), Gaps = 15/667 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L +L+ +H+ + SG + G K+I Y AR LF+ + N + WN+M
Sbjct: 17 LTTLKSLHTHILKSGSLFS--FFGHKLIDGYIKCSVITEARKLFDEMPN--RHIVTWNSM 72
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I ++ + G E +ELY M G+ ++YTF + KA + + EG+ HG + GF
Sbjct: 73 ISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGF 132
Query: 142 -LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
+SD +V +VDMYAK G+ D VFD + +D+V +T +I Y Q EAL +F+
Sbjct: 133 EVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFE 192
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ + T+ SV + G LGD++ + +HG + + + Q S++ MY++C
Sbjct: 193 DMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCN 252
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
VE + VF+ + ++W S + G +QNG+ AL +F EM PN T ++
Sbjct: 253 MVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILH 312
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
AC+ L + G + H + + + + A++ +Y KCG+++ A ++F + +E +V
Sbjct: 313 ACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESL--TELDV 370
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
S N +I Y +G G +ALE F +M + G KP+ +TF SIL AC++AGL++EG + F+
Sbjct: 371 VSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSL 430
Query: 441 M-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI- 498
+ S++ HY CM+D+LGRA EA +I++ P+ W LL AC+IHGE+
Sbjct: 431 IRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVE 489
Query: 499 -AANYLFQL---EPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
A ++ ++ P G +L++NIYA++ KW V +++ ++ LKK A S ++
Sbjct: 490 MAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDID 549
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+++ F D +P E+ + + + ++ GY PD L D+E+E + L YHSE
Sbjct: 550 REVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSE 609
Query: 615 KLAVAFGIMNLTPE-AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
KLA+AF + + +++ KNLRVC DCHS +F+S + R II RDA RFHHF+GG
Sbjct: 610 KLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGI 669
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 670 CSCKDYW 676
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 326/556 (58%), Gaps = 9/556 (1%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH II +G + L+ + G ++F + D + ++ +
Sbjct: 110 VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 169
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ ++ +++ G + T SV A L + + +H + + + D+ +Q +
Sbjct: 170 SIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAA 229
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++A+YA+ +++ A+ VFD M +R +I+WNS+++GY QNG E++ LF M S +P+
Sbjct: 230 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 289
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + L+S+C+ LG+ G H Y + ++ L ++++MY +CG++ A +F+
Sbjct: 290 SATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFD 349
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ERNV +W +I+GYGMHG+GR+A+E F++M G +P++ITF ++LSAC+H+GLI
Sbjct: 350 SM--KERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLI 407
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ-MPLPPNDSVWGALL 489
D+GR+ F+ M + + P V+H CMVDM GRAG L +A+ IK+ +P P +VW ++L
Sbjct: 408 DDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSML 467
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+H G A ++ +EPE+ G++V++SNIYA + + V +R M + LKK
Sbjct: 468 GACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKK 527
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
+S IE + F D+ +P +Y+ ++ + +GY+P +HD+E+E+
Sbjct: 528 QVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEE 587
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
R++ L YHSEKLA+AFG++ +++ KNLR+C DCHSA + IS I R+IIVRD
Sbjct: 588 RDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKF 647
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF+ G+CSC DYW
Sbjct: 648 RFHHFKDGSCSCLDYW 663
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 234/441 (53%), Gaps = 7/441 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ LL+S L +L+Q+H+ + SGL +++ L K+I T G AR LF ++ N
Sbjct: 94 HEALLRSGPRLRNLQQVHAHIIVSGL-HRSRSLLTKLISLVCTAGSITYARRLFPTVPNP 152
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S FL++++++ + G ++T+ Y M SG ++YTF V+KACA S + GK
Sbjct: 153 DS--FLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKE 210
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++ G+ SD YVQAAL+ +YAK KVFD M R +++W +I+ Y+Q
Sbjct: 211 IHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGL 270
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P+E++ LF + G DS TIVS+ S+ QLG + +H YA N F ++ + S
Sbjct: 271 PQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTS 330
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY RCGNV KAR VFD M++R++++W +M++GY +G +A+ LF EM+ +PN
Sbjct: 331 LINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPN 390
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMF 370
+T + ++SAC + G GR+ + + + N M DM+ + G L+ A
Sbjct: 391 NITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFI 450
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHAG 429
P E + W ++ MH + ++ +L E P H S + A AG
Sbjct: 451 KKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYAL--AG 508
Query: 430 LIDEGRKCFADMTKLSVKPEV 450
+D MT+ +K +V
Sbjct: 509 RMDRVEMVRNMMTRRRLKKQV 529
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 326/556 (58%), Gaps = 9/556 (1%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH II +G + L+ + G ++F + D + ++ +
Sbjct: 46 VHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGF 105
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+ ++ +++ G + T SV A L + + +H + + + D+ +Q +
Sbjct: 106 SIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAA 165
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++A+YA+ +++ A+ VFD M +R +I+WNS+++GY QNG E++ LF M S +P+
Sbjct: 166 LIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPD 225
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T + L+S+C+ LG+ G H Y + ++ L ++++MY +CG++ A +F+
Sbjct: 226 SATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFD 285
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ERNV +W +I+GYGMHG+GR+A+E F++M G +P++ITF ++LSAC+H+GLI
Sbjct: 286 SM--KERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLI 343
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ-MPLPPNDSVWGALL 489
D+GR+ F+ M + + P V+H CMVDM GRAG L +A+ IK+ +P P +VW ++L
Sbjct: 344 DDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSML 403
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+H G A ++ +EPE+ G++V++SNIYA + + V +R M + LKK
Sbjct: 404 GACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKK 463
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
+S IE + F D+ +P +Y+ ++ + +GY+P +HD+E+E+
Sbjct: 464 QVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEE 523
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
R++ L YHSEKLA+AFG++ +++ KNLR+C DCHSA + IS I R+IIVRD
Sbjct: 524 RDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKF 583
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF+ G+CSC DYW
Sbjct: 584 RFHHFKDGSCSCLDYW 599
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/441 (32%), Positives = 234/441 (53%), Gaps = 7/441 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ LL+S L +L+Q+H+ + SGL +++ L K+I T G AR LF ++ N
Sbjct: 30 HEALLRSGPRLRNLQQVHAHIIVSGL-HRSRSLLTKLISLVCTAGSITYARRLFPTVPNP 88
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S FL++++++ + G ++T+ Y M SG ++YTF V+KACA S + GK
Sbjct: 89 DS--FLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKE 146
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++ G+ SD YVQAAL+ +YAK KVFD M R +++W +I+ Y+Q
Sbjct: 147 IHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGL 206
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P+E++ LF + G DS TIVS+ S+ QLG + +H YA N F ++ + S
Sbjct: 207 PQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTS 266
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY RCGNV KAR VFD M++R++++W +M++GY +G +A+ LF EM+ +PN
Sbjct: 267 LINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPN 326
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMF 370
+T + ++SAC + G GR+ + + + N M DM+ + G L+ A
Sbjct: 327 NITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFI 386
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHAG 429
P E + W ++ MH + ++ +L E P H S + A AG
Sbjct: 387 KKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYAL--AG 444
Query: 430 LIDEGRKCFADMTKLSVKPEV 450
+D MT+ +K +V
Sbjct: 445 RMDRVEMVRNMMTRRRLKKQV 465
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/608 (33%), Positives = 348/608 (57%), Gaps = 62/608 (10%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCG----QTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+H I++G + D+ A ++ A D K+F++M R+ SW +I +
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 188 QAEKPEEALI----LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
++++ ++ALI ++ E + + T SV A + G + + + +HG A+ F
Sbjct: 102 ESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 244 EDLCIQNSIVAMYARCG------------------------------------------- 260
D + +++V MY CG
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 261 --NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
+ + AR++FD M +R ++SWN+M++GY NG +A+ +F EM+ D +PN VT + +
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ A + LGS +LG H Y +S ++ID L +A++DMY+KCG ++ A ++F + P E
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL-PRE- 338
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
NV +W+ +I G+ +HG A++ F +M + GV+P + + ++L+ACSH GL++EGR+ F
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 439 ADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ M + ++P ++HY CMVD+LGR+G L EA + I MP+ P+D +W ALL ACR+ G
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 498 I-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
+ AN L + P +G +V +SN+YA+ W EV ++R MK K ++K S+I+
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 518
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYH 612
+ F D +P KE+ + ++ ++++AGY P + L ++E+ED+E++L+YH
Sbjct: 519 IDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYH 578
Query: 613 SEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
SEK+A AFG+++ +P +++ KNLR+C DCHS+ + IS +Y+RKI VRD RFHHF+ G
Sbjct: 579 SEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDG 638
Query: 673 TCSCNDYW 680
+CSC DYW
Sbjct: 639 SCSCMDYW 646
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 233/515 (45%), Gaps = 95/515 (18%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTT-----YGEPNTARSLFNSIHN 70
+ +C + L QIH+ SG + L A I+++ + + + A +FN +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTL--AAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 87
Query: 71 DKSYSFLWNTMIRAYANNGH---CVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+S WNT+IR ++ + + Y M + N +TFP VLKACA I
Sbjct: 88 RNCFS--WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG----------------------- 164
EGK +HG ++ GF D +V + LV MY CG D
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 165 ------------------CK----VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
CK +FD+M R +VSW MI+ Y ++A+ +F++
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
++ + + VT+VSV A+ +LG + + +H YA + D + ++++ MY++CG +
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
EKA VF+ + + ++I+W++M+ G+ +GQA +A+ F +M+ + +P+ V + L++AC
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Query: 323 TYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
++ G + GR++ +++ + ++ ++D+ + G LD AE
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE-------------- 431
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
EF M +KPD + + ++L AC G ++ G++ A++
Sbjct: 432 -------------------EFILNM---PIKPDDVIWKALLGACRMQGNVEMGKRV-ANI 468
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
V + Y + +M G E +M +M
Sbjct: 469 LMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/631 (33%), Positives = 352/631 (55%), Gaps = 43/631 (6%)
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+ GH + + +S S I S F +L++C S + + GK +H II +G SD +
Sbjct: 33 SKGHLKQAFDRFS----SHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKF 88
Query: 147 VQAALVDMYAKCGQTDDGC-------------------------------KVFDEMSVRD 175
+ L+++Y+KCGQ D K+FDEM R+
Sbjct: 89 ISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERN 148
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+ +W M+ Q E EE L LF + + G L D + SV L ++ + VHG
Sbjct: 149 VATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHG 208
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
Y F +L + +S+ MY +CG++ + + M +++++WN+++ G QNG E
Sbjct: 209 YVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEE 268
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
L ++ M+ + +P+ +T + ++S+C+ L + G++ H +I + + ++ ++++
Sbjct: 269 VLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLIS 328
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY++CG L+ + +F + +V W+ +IA YG HG G +A++ F+QM +E ++ +
Sbjct: 329 MYSRCGCLEYSLKVF--LECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEAND 386
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+TF S+L ACSH GL ++G K F M K VKP ++HY CMVD+LGR G + EA +I+
Sbjct: 387 VTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIR 446
Query: 475 QMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
MP+ + W LL AC+IH + + +F+L+P +VL+SNI+A+ +W +
Sbjct: 447 SMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDD 506
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
V +R+ M+++ LKK S +E I F D+ +P E+ + + E+K GY
Sbjct: 507 VSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGY 566
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
+PD+ LHD++ ED+E+ L +HSEKLA+AF ++ ++V KNLRVC+DCH A ++
Sbjct: 567 VPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKY 626
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS I R+IIVRD++RFHHF+ G CSC DYW
Sbjct: 627 ISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 230/500 (46%), Gaps = 56/500 (11%)
Query: 7 STEGFYDQLLKSC---NFLASLRQIHSSLTTSG------LINQALHLGAK---------- 47
S + LL+SC N L+ +Q+HS + TSG + N L+L +K
Sbjct: 50 SEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITL 109
Query: 48 --------------IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVE 93
+I Y G+ TAR +F+ + + WN M+ E
Sbjct: 110 FGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVAT--WNAMVAGLIQFEFNEE 167
Query: 94 TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVD 153
L L+S M G + + VL+ CA ++ G+ VHG + + GF + V ++L
Sbjct: 168 GLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAH 227
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MY KCG +G ++ M +++V+W +I Q PEE L + + G D +T
Sbjct: 228 MYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKIT 287
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
VSV S+ +L + + Q +H I + + +S+++MY+RCG +E + VF E
Sbjct: 288 FVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECE 347
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
D++ W+SM+ Y +G+ EA+ LF++M+ + N VT L L+ AC++ G ++ G K
Sbjct: 348 NGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIK 407
Query: 334 FHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
F ++ +K ++D+ + G ++ AE + + P + +V +W L++ +
Sbjct: 408 FFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSM-PVKADVITWKTLLSACKI 466
Query: 393 HGHGRKALEFFSQMLEEGVKPD------HITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
H K E ++ EE + D ++ ++I ++ + + RK D KL
Sbjct: 467 H----KKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRD-RKLKK 521
Query: 447 KP-----EVK---HYACMVD 458
+P EVK H CM D
Sbjct: 522 EPGISWLEVKNQIHQFCMGD 541
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/683 (34%), Positives = 361/683 (52%), Gaps = 22/683 (3%)
Query: 12 YDQLLKSCN---FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ +L +C+ FLA+ R IH +GL Q + + + ++ Y G A +LF +
Sbjct: 131 FVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEI-VASALVSMYGRCGSLRDANALFGHL 189
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
LWN MI A + NG E LE++ M + GI + TF V KAC+S+ +
Sbjct: 190 ERHLDV-VLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRA 248
Query: 129 GKV--VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+V H + TG SD V ALV+ YA+CG+ D + F M R+ VSWT MI A+
Sbjct: 249 SQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAF 308
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q A+ F EG++ T+ + A+ D+ A+ V A D+
Sbjct: 309 AQIGHLL-AVETFHAMLLEGVVPTRSTLFA---ALEGCEDLHTARLVEAIAQEIGVATDV 364
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKR--DLISWNSMLTGYIQNGQASEALLLFDEMQ 304
I +V YARC E A VF E+ D +M+ Y Q L+
Sbjct: 365 AIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAI 424
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDL 363
P+ + + + AC L + GR+ H + + + D TL NA++ MY +CG L
Sbjct: 425 ERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSL 484
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A + F+ + P+ R+ SWN +++ HG + F ML+EG + + F ++LS
Sbjct: 485 RDARDAFDGM-PA-RDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLS 542
Query: 424 ACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
AC+HAGL++ G + F+ MT V P +HY CMVD+LGR G L +A +++ MP+PP+
Sbjct: 543 ACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDA 602
Query: 483 SVWGALLLACRIHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+ W AL+ ACRI+G+ AA + +L HT +V + NIY+A+ +W + +R+ M
Sbjct: 603 ATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIM 662
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
+ GL+K S IE + F DR +P + +Y ++E + I+ AGY L
Sbjct: 663 ADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVL 722
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
HDVE+E +E +L +HSEKLA+AFG+M+ + ++V KNLRVC DCH+A +FIS ++ R+
Sbjct: 723 HDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGRE 782
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I+VRD RFHHF+ G CSC DYW
Sbjct: 783 IVVRDVRRFHHFKDGACSCGDYW 805
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 228/492 (46%), Gaps = 17/492 (3%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
+L++ CN +A + +HS +++S +++ +L + ++ Y G +A +F+ I + KS
Sbjct: 34 RLVRECNSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAH-KS 92
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
LW +I AY + GH + L+ + + GI+ ++ F VL AC+S + G+++H
Sbjct: 93 I-VLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIH 151
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKP 192
+ G V +ALV MY +CG D +F + D+V W MITA Q P
Sbjct: 152 RCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSP 211
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC---NAFLEDLCIQ 249
EAL +F + Q G+ D VT VSV A L+A V G+ C D+ +
Sbjct: 212 REALEIFYRMLQLGIPPDLVTFVSVFKACSS-SPSLRASQVKGFHTCLDETGLGSDVVVA 270
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
++V YARCG ++ AR F M +R+ +SW SM+ + Q G A+ F M
Sbjct: 271 TALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHAMLLEGVV 329
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P T + C L + +L I + D + ++ YA+C + A +
Sbjct: 330 PTRSTLFAALEGCEDLHTARLVEAIAQEI---GVATDVAIVTDLVMAYARCDGQEDAIRV 386
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F+ E + + +IA Y R + + +E G+ PD I + + L AC+
Sbjct: 387 FSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLA 446
Query: 430 LIDEGRK---CFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+ EGR+ C A +L +V +V M G+ G L +A D MP ++ W
Sbjct: 447 ALSEGRQIHACVAADRRL--DRDVTLGNAIVSMYGQCGSLRDARDAFDGMP-ARDEISWN 503
Query: 487 ALLLACRIHGEI 498
A+L A HG +
Sbjct: 504 AMLSASAQHGRV 515
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/683 (32%), Positives = 364/683 (53%), Gaps = 53/683 (7%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKII--IKYTTYGEPNTARSLF 65
TE LL C L + +QIH+++ GL + + K++ + + A LF
Sbjct: 4 TEPLCLSLLNICKSLTTFKQIHANVLKLGLESDPF-IAGKLLHHCAISLSDSLDYACRLF 62
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISS-NSYTFPFVLKACASNS 124
N F+ NT+IR + ++L + MRR+ S +S++F F++KA A+
Sbjct: 63 RYTPNPDV--FMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLR 120
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ G +H + G + +V L+ MY +CG KVFDEM + ++W M+T
Sbjct: 121 SVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVT 180
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
A + + LF L+S
Sbjct: 181 ACCRGGDMKGGRELFDLMPVRNLMS----------------------------------- 205
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
N ++A Y + G +E AR +F M +D +SW++M+ G+ NG EA F E+Q
Sbjct: 206 ----WNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSFFRELQ 261
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+PN + ++SAC G+ + G+ HG+I S + ++ NA++D Y+KCG++
Sbjct: 262 RKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVL 321
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
A+ +F I +ERN+ SW ++A MHGHG +A+ F +M E G++PD I F S+L A
Sbjct: 322 MAQLVFERIM-NERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYA 380
Query: 425 CSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
CSHAGL+++G + F M + +++P ++HY CMVD+ GRAG L +A++ + QMP+P
Sbjct: 381 CSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAI 440
Query: 484 VWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
+W LL AC +HG++ L +L+P ++ VL+SN YA + KW++ +R M
Sbjct: 441 IWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMT 500
Query: 539 NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM-AGYMPDLSCAL 597
+ + K +S+IE K + F + +E YKK++ + +++ GY+P++ L
Sbjct: 501 EQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEIIRRLRVEGGYVPEIGRVL 560
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
HD+E+E++E ++ HSEKLAVAFGI L +++ KNLR+C DCH+ + IS IY+ +
Sbjct: 561 HDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRICRDCHAVMKLISQIYKVE 620
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I+VRD +RFH F+ G CSC DYW
Sbjct: 621 IVVRDRSRFHSFKDGYCSCRDYW 643
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/691 (33%), Positives = 366/691 (52%), Gaps = 51/691 (7%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
+ S R++ + G+++ ++ Y P AR LF+ + + S WN +
Sbjct: 32 IESARRVFDEMPDKGIVSWN-----SMVAGYFQNNRPREARYLFDKMPERNTVS--WNGL 84
Query: 82 IRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLIL-----EGKVVHGD 135
I Y N E + + TM R+ +S + +V + S + L E VV
Sbjct: 85 ISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWT 144
Query: 136 IIRTGFLS-----------------DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
++ G + D + ++ Y + G+ + ++FDEM R+++S
Sbjct: 145 VMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVIS 204
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA--VGQLGDVLKAQAVHGY 236
WT MI+ Y Q + + A LF+ ++ +S + ++ + + ++ A V
Sbjct: 205 WTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAV 264
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
CNA ++ + + G V KAR VFD + ++D +W++M+ Y + G EA
Sbjct: 265 VACNA----------MILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEA 314
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L LF MQ + N + + ++S C L S GR+ H ++ S D + + ++ M
Sbjct: 315 LNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITM 374
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y KCGDL A +F+ P +++ WN +I GY HG +AL+ F +M G+ D +
Sbjct: 375 YVKCGDLVKARQIFDRFSP--KDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGV 432
Query: 417 TFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
TF +LSACS+ G + EG + F M +K V+P+ +HYACMVD+LGRAG + +A D+I++
Sbjct: 433 TFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQK 492
Query: 476 MPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ + +WGALL ACR H E+AA L QLEP++ G ++L+SNIYA+ +W +V
Sbjct: 493 MPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDV 552
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA-DRVNPYWKEVYKKVESMAVEIKMAGY 589
+LR +M+ K + K S IE K + F +P + K +E + ++ AGY
Sbjct: 553 AELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGY 612
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
PD S LHDV++E++ L +HSE+LAVAFG++ + ++V KNLRVC DCHSA +
Sbjct: 613 YPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKL 672
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I+ I R+II+RDANRFHHF+ G CSC DYW
Sbjct: 673 IAKITGREIILRDANRFHHFKDGFCSCRDYW 703
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 203/454 (44%), Gaps = 77/454 (16%)
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ----------- 203
YA+ GQ + +VFDEM + +VSW M+ Y Q +P EA LF K
Sbjct: 26 YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLI 85
Query: 204 -----------------------------------QEGLLSDSVT---------IVSVAS 219
QEGL+S++ T +VS
Sbjct: 86 SGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTV 145
Query: 220 AVGQLGDVLKAQAVHG-YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
+G L V + G + I ++D+ + ++++ Y + G + +AR +FD M +R++I
Sbjct: 146 MLGGLIQVRRIDEARGLFDIMP--VKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVI 203
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
SW +M++GY+QNGQ A LF+ M + N V+ ++ +G Q GR
Sbjct: 204 SWTTMISGYVQNGQVDVARKLFEVMP----EKNEVSWTAML-----MGYTQGGRIEEASE 254
Query: 339 INSNMKIDATLR-NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ M + A + NA++ + + G++ A +F+ I E++ +W+ +I Y G
Sbjct: 255 LFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIR--EKDDGTWSAMIKVYERKGFEV 312
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMV 457
+AL F+ M EGV+ + + S+LS C+ +D GR+ A++ K +V + ++
Sbjct: 313 EALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLI 372
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIAANYLFQLEPEHTGY---- 513
M + G L +A + + P + +W +++ HG + E +G
Sbjct: 373 TMYVKCGDLVKARQIFDRFS-PKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDG 431
Query: 514 --FVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
FV + + + + K +E ++ E MK+K L +P
Sbjct: 432 VTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEP 465
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 59/351 (16%)
Query: 239 CNAFLEDLCIQ-NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
C + + I NS +A YAR G +E AR VFD M + ++SWNSM+ GY QN + EA
Sbjct: 8 CRRYCTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREAR 67
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
LFD+M N V+ L+S Y+ +R + + ++ + + A++ Y
Sbjct: 68 YLFDKMPER----NTVSWNGLISG--YVKNRMVSEARKAF--DTMPERNVVSWTAMVRGY 119
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNV-------------------------------L 386
+ G + AE +F + E+NV SW V +
Sbjct: 120 VQEGLVSEAETLFWQM--PEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNM 177
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I+GY G +A E F +M V I++T+++S G +D RK F V
Sbjct: 178 ISGYCQEGRLAEARELFDEMPRRNV----ISWTTMISGYVQNGQVDVARKLF------EV 227
Query: 447 KPEVKHYACMVDMLG--RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-ANYL 503
PE + ++G + G + EA ++ MP+ + A++L +GE+A A +
Sbjct: 228 MPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVAC-NAMILGFGQNGEVAKARQV 286
Query: 504 F-QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK--PAAFSVI 551
F Q+ + G + M +Y E L M+ +G++ P+ SV+
Sbjct: 287 FDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVL 337
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/601 (35%), Positives = 341/601 (56%), Gaps = 16/601 (2%)
Query: 94 TLELYSTMRRSGISSNSY---TFPFVLKACASNSLIL-EGKVVHGDIIRTGFLSDSYVQA 149
T +++S +SY T+P L +C L E K + I+T +D +
Sbjct: 3 TAPFPPVIQQSPSQHSSYYNTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILT 62
Query: 150 ALVDMYAKCGQT---DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
L++ + T D ++F+ + D+V + M Y ++ P +A+ LF K
Sbjct: 63 KLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYN 122
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
LL D T S+ A + + +H AI E+ + +++ MYA C +V+ A+
Sbjct: 123 LLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQ 182
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
VFD + + ++S+N+++TGY ++ + +EAL LF ++Q KPN VT L ++S+C LG
Sbjct: 183 RVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLG 242
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ LG+ H Y+ + + + A++DMYAKCG LD A ++F + S R+ +W+ +
Sbjct: 243 ALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESM--SVRDTQAWSAM 300
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-S 445
I Y MHG G+ + F +M V+PD ITF +L ACSH GL+DEG + F M+++
Sbjct: 301 IVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYG 360
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AA 500
+ P +KHY CMVD+LGRAG L+EA+ I ++P+ P +W LL +C HG +
Sbjct: 361 IIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVM 420
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
N + +L+ H G +V++SN+ A + KW +V LR+ M +KG K S IE + F
Sbjct: 421 NQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEF 480
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALH-DVEDEDREHMLNYHSEKLAVA 619
+ D V+ +++ ++ + E+K GY+PD S +H D+EDE++E L YHSEKLA++
Sbjct: 481 FSGDGVHYVSTALHRALDELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAIS 540
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG++N P ++V KNLRVC DCHSA + IS + R+II+RD RFHHF+ G CSC DY
Sbjct: 541 FGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDY 600
Query: 680 W 680
W
Sbjct: 601 W 601
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 213/421 (50%), Gaps = 15/421 (3%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYT---TYGEPNTARSLFNSIHNDK 72
L C L L+QI + + L N L + K+I T T + A LF +I
Sbjct: 33 LPKCTSLKELKQIQAFSIKTHLQND-LQILTKLINSCTQNPTTASMDYAHQLFEAIPQPD 91
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
L+N+M R Y+ + ++ + L+ + + YTFP +LKAC +GK +
Sbjct: 92 I--VLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQL 149
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H I+ G + YV L++MYA C D +VFDE+ +VS+ +IT Y ++ +P
Sbjct: 150 HCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRP 209
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EAL LF++ Q L + VT++SV S+ LG + + +H Y N + + + ++
Sbjct: 210 NEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTAL 269
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ MYA+CG+++ A VF+ M RD +W++M+ Y +GQ + + +F+EM + +P+
Sbjct: 270 IDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDE 329
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMF 370
+T L L+ AC++ G G ++ Y ++ I +++ ++D+ + G L A
Sbjct: 330 ITFLGLLYACSHTGLVDEGFRYF-YSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFI 388
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE--EGVKPDHITFTSILSACSHA 428
+++ P + W L++ HG+ A + +Q+LE + D++ +++ C+ A
Sbjct: 389 DEL-PIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNL---CARA 444
Query: 429 G 429
G
Sbjct: 445 G 445
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 351/615 (57%), Gaps = 60/615 (9%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC---------- 165
+L++C+S S + K++HG ++RT +SD +V + L+ A C DD
Sbjct: 18 LLQSCSSFS---DLKIIHGFLLRTHLISDVFVASRLL---ALC--VDDSTFNKPTNLLGY 69
Query: 166 --KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
+F ++ +L + ++I + +P +A + + + + D++T + A +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA-------------------------- 257
+ VL + H + F D+ ++NS+V MYA
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 258 -----RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+CG VE AR +FD M R+L +W+ M+ GY +N +A+ LF+ M+ N
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+ ++S+C +LG+ + G + + Y++ S+M ++ L A++DM+ +CGD++ A ++F
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ E + SW+ +I G +HGH KA+ +FSQM+ G P +TFT++LSACSH GL++
Sbjct: 310 L--PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G + + +M K ++P ++HY C+VDMLGRAG L EA + I +M + PN + GALL A
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C+I+ E N L +++PEH+GY+VL+SNIYA + +W ++ LR+ MK K +KKP
Sbjct: 428 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPP 487
Query: 547 AFSVIEYGKDIQGFHTAD-RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
+S+IE I F D + +P ++ +K E + +I++ GY + A DV++E++
Sbjct: 488 GWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEK 547
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E ++ HSEKLA+A+G+M P +++ KNLRVC DCH+ + IS +Y R++IVRD NR
Sbjct: 548 ESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNR 607
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G CSC DYW
Sbjct: 608 FHHFRNGVCSCRDYW 622
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 227/459 (49%), Gaps = 58/459 (12%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKII---IKYTTYGEPNT----ARSLFNS 67
LL+SC+ + L+ IH L + LI+ + ++++ + +T+ +P A +F+
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVF-VASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I N F++N +IR ++ + Y+ M +S I ++ TFPF++KA + +L
Sbjct: 77 IQNPNL--FVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY- 186
G+ H I+R GF +D YV+ +LV MYA CG ++F +M RD+VSWT M+ Y
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 187 -----EQA-----EKP--------------------EEALILFQKTQQEGLLSDSVTIVS 216
E A E P E+A+ LF+ ++EG++++ +VS
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRD 276
V S+ LG + + + Y + + +L + ++V M+ RCG++EKA VF+ + + D
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
+SW+S++ G +G A +A+ F +M + P VT ++SAC++ G + G +
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE--- 371
Query: 337 YIINSNMKIDATLR------NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
I NMK D + ++DM + G L AEN +H + N L+
Sbjct: 372 --IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH-VKPNAPILGALLGAC 428
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILS---ACS 426
++ + A + +++ VKP+H + +LS AC+
Sbjct: 429 KIYKNTEVAERVGNMLIK--VKPEHSGYYVLLSNIYACA 465
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/606 (35%), Positives = 342/606 (56%), Gaps = 57/606 (9%)
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD--DGCKVFDEMSVRDLVSWTVMITAYE 187
K +H +I+T + D A L+ A D K+F M + S+ +I A
Sbjct: 28 KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALS 87
Query: 188 QAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI-------- 238
++ P +AL++F + ++ + + T SV A G+ + + + VHG A+
Sbjct: 88 ESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDE 147
Query: 239 -------------------------------CNAFLE-------DLCIQNSIVAMYARCG 260
C+ + D+ + N ++ Y R G
Sbjct: 148 FVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIG 207
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
+E AR +FD M +R ++SWN M+ GY Q+G EA+ +F EMQ ++ PN VT + ++
Sbjct: 208 ELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLP 267
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
A + LG+ +LG+ H Y + +N+ +D L +A++DMYAKCG ++ A +F + +RNV
Sbjct: 268 AMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGL--PKRNV 325
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
+W+ +IAG MHG + L+ F M GV P +T+ +LSACSHAGL++EGR F
Sbjct: 326 VTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDH 385
Query: 441 MTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI- 498
M ++S ++P ++HY CMVD+LGRAG L E+ ++I MP+ P+D +W ALL AC++HG +
Sbjct: 386 MVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVE 445
Query: 499 ----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
A +L +L P +G +V +SNIYA+ W V K+R MK ++K S IE
Sbjct: 446 MGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELD 505
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
I F D +P K+++ ++ M+ + + GY P+ + L ++++ED+E LNYHSE
Sbjct: 506 GVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSE 565
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
K+A+AFG+++ P+ +++TKNLR+C DCHS+ + IS IY+RKIIVRD RFHHF G+C
Sbjct: 566 KIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSC 625
Query: 675 SCNDYW 680
SC DYW
Sbjct: 626 SCMDYW 631
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 220/442 (49%), Gaps = 59/442 (13%)
Query: 19 CNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTT---YGEPNTARSLFNSIHNDKSYS 75
C + L+Q+H+ + + I L A +++++ + + + AR +F S+H +S
Sbjct: 21 CKTMQDLKQLHAQMIKTAQIRDPL--AAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFS 78
Query: 76 FLWNTMIRAYA-NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+ NT+IRA + +N C L + + N +TFP V KAC + EG+ VHG
Sbjct: 79 Y--NTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHG 136
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTD------------DGC----------------- 165
++ G SD +V + +V MY CG + DGC
Sbjct: 137 LAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLW 196
Query: 166 -----------------KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL 208
+FDEM R +VSW VMI Y Q+ +EA+ +F++ Q +
Sbjct: 197 NVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVP 256
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
+ VT+VSV A+ +LG + + VH YA+ N D + ++++ MYA+CG++EKA V
Sbjct: 257 PNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQV 316
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F+ + KR++++W++++ G +G+A + L F++M+ + P+ VT + L+SAC++ G
Sbjct: 317 FEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLV 376
Query: 329 QLGRKFHGYIIN-SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
GR F +++ S ++ ++D+ + G L+ +E + ++ P + + W L+
Sbjct: 377 NEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNM-PIKPDDVIWKALL 435
Query: 388 AGYGMHGH---GRKALEFFSQM 406
MHG+ G++ E ++
Sbjct: 436 GACKMHGNVEMGKRVAEHLMEL 457
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/640 (34%), Positives = 358/640 (55%), Gaps = 45/640 (7%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N + GH E E + S I + F +L+AC + GK +H I
Sbjct: 42 NEQFATLCSKGHIREAFESF----LSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFT 97
Query: 139 TGFLSDSYVQAALVDMYAKCGQT-------------------------------DDGCKV 167
+G SD ++ L+++Y+K G+ + +
Sbjct: 98 SGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNL 157
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
FDEM R++ +W M+T + E EEAL+LF + + + D ++ SV LG +
Sbjct: 158 FDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGAL 217
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
L Q VH Y + F +L + S+ MY + G++ V + M L++WN++++G
Sbjct: 218 LAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGK 277
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
Q G L + M+ + +P+ +T + ++S+C+ L G++ H + + +
Sbjct: 278 AQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEV 337
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
++ ++++ MY++CG L + F + ER+V W+ +IA YG HG G +A++ F++M
Sbjct: 338 SVVSSLVSMYSRCGCLQDSIKTF--LECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEME 395
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCL 466
+E + + ITF S+L ACSH GL D+G F M K +K ++HY C+VD+LGR+GCL
Sbjct: 396 QENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCL 455
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH--GEIA---ANYLFQLEPEHTGYFVLMSNIY 521
EA MI+ MP+ + +W LL AC+IH EIA A+ + +++P+ + +VL++NIY
Sbjct: 456 EEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIY 515
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
+++N+W+ V ++R MK+K +KK S +E + FH D +P E+ + +E +
Sbjct: 516 SSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELT 575
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVC 640
EIK GY+PD S LHD+++E++E +L +HSEKLA+AF +MN TPE V ++V KNLRVC
Sbjct: 576 SEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMN-TPEGVPIRVMKNLRVC 634
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+DCH A ++IS I + +IIVRD++RFHHF+ GTCSC DYW
Sbjct: 635 SDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 214/468 (45%), Gaps = 43/468 (9%)
Query: 11 FYDQLLKSCNFLASL---RQIHSSLTTSG------LINQALHLGAK-------------- 47
+ LL++C L S+ +Q+HS + TSG + N L+L +K
Sbjct: 71 LFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRM 130
Query: 48 ---------IIIK-YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
I+IK Y G +A++LF+ + + + WN M+ E L L
Sbjct: 131 PRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVAT--WNAMVTGLTKFEMNEEALLL 188
Query: 98 YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK 157
+S M + Y+ VL+ CA +L G+ VH +++ GF + V +L MY K
Sbjct: 189 FSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMK 248
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
G DG +V + M LV+W +++ Q E L + + G D +T VSV
Sbjct: 249 AGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSV 308
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
S+ +L + + + +H A+ ++ + +S+V+MY+RCG ++ + F ++RD+
Sbjct: 309 ISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDV 368
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
+ W+SM+ Y +GQ EA+ LF+EM+ + N +T L L+ AC++ G + G
Sbjct: 369 VLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDM 428
Query: 338 IINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
++ +K ++D+ + G L+ AE M + P + + W L++ +H +
Sbjct: 429 MVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSM-PVKADAIIWKTLLSACKIHKNA 487
Query: 397 RKALEFFSQMLEEGVKPD----HITFTSILSACSHAGLIDEGRKCFAD 440
A ++L + P ++ +I S+ + + E R+ D
Sbjct: 488 EIARRVADEVLR--IDPQDSASYVLLANIYSSANRWQNVSEVRRAMKD 533
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/605 (33%), Positives = 336/605 (55%), Gaps = 43/605 (7%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
L+ CA N + K +H I++ G + + LV++Y KCG +VFDEM RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLL-SDSVTIVSVASAVGQLGDVLKAQAVHG 235
++W ++TA QA + L +F L D ++ A LG + + VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY-------- 287
+ I + + D +++S+V MYA+CG + A+ VFD + ++ ISW +M++GY
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 288 -----------------------IQNGQASEALLLFDEMQNSDCKP-NPVTALILVSACT 323
+Q+G+ EA +F EM+ +P+ +V AC
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + GR+ HG +I + NA++DMYAKC D+ A+++F+ + R+V SW
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR--HRDVVSW 307
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
LI G HG KAL + M+ GVKP+ +TF ++ ACSH G +++GR+ F MTK
Sbjct: 308 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK 367
Query: 444 -LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE----- 497
++P ++HY C++D+LGR+G L EA ++I MP PP++ W ALL AC+ G
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 498 -IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
IA + + + + ++L+SNIYA+++ W +V + R + ++K S +E K+
Sbjct: 428 RIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKE 487
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMA-GYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F+ + +P +++++ ++ + E+++ GY+PD S LHD++++++E +L +HSE+
Sbjct: 488 TEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSER 547
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
AVA+G++ P +++ KNLRVC DCH + IS I R+IIVRDA R+HHF+GG CS
Sbjct: 548 SAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCS 607
Query: 676 CNDYW 680
CND+W
Sbjct: 608 CNDFW 612
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 224/466 (48%), Gaps = 43/466 (9%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI-HNDK 72
QL L + + +H+ + G++ Q L ++ Y G + A +F+ + H D
Sbjct: 11 QLCARNRTLTTAKALHAHIVKLGIV-QCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKV 131
W +++ A +TL ++S++ S + + + F ++KACA+ I G+
Sbjct: 70 ---IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH I + + +D V+++LVDMYAKCG + VFD + V++ +SWT M++ Y ++ +
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 192 PEEALILFQKTQQEGLLS--------------------------------DSVTIVSVAS 219
EEAL LF+ + L S D + + S+
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
A L + + VHG I F + I N+++ MYA+C +V A+ +F M RD++S
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYI 338
W S++ G Q+GQA +AL L+D+M + KPN VT + L+ AC+++G + GR+ F
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ ++ ++D+ + G LD AEN+ + + P + +W L++ G G+
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM-PFPPDEPTWAALLSACKRQGRGQM 425
Query: 399 ALEFFSQMLEEGVKPD---HITFTSILSACSHAGLIDEGRKCFADM 441
+ ++ D +I ++I ++ S G + E R+ +M
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 185/450 (41%), Gaps = 80/450 (17%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ L+K+C L S+ RQ+H S N + + + ++ Y G N+A+++F+SI
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEV-VKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELY---------------STMRRSGISSNSYTF 113
+ S W M+ YA +G E LEL+ S +SG +++
Sbjct: 167 RVKNTIS--WTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSV 224
Query: 114 -------------PFVLK----ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA 156
P VL ACA+ + + G+ VHG +I GF S ++ AL+DMYA
Sbjct: 225 FTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYA 284
Query: 157 KCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVS 216
KC +F M RD+VSWT +I Q + E+AL L+ G+ + VT V
Sbjct: 285 KCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVG 344
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS------IVAMYARCGNVEKAR-LVF 269
+ A +G V K G + + +D I+ S ++ + R G +++A L+
Sbjct: 345 LIYACSHVGFVEK-----GRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
M D +W ++L+ + G+ + + D + +S +P T
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPST--------------- 444
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
YI+ SN+ A+L V + K G+++ + + H S V AG
Sbjct: 445 -------YILLSNIYASASLWGKVSEARRKLGEMEVRK---DPGHSSVEVRKETEVFYAG 494
Query: 390 YGMHGHGRKALEFFSQMLEE-----GVKPD 414
H ++ EE G PD
Sbjct: 495 ETSHPLKEDIFRLLKKLEEEMRIRNGYVPD 524
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/668 (33%), Positives = 362/668 (54%), Gaps = 22/668 (3%)
Query: 26 RQIHSSLTTS------GLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
R IH+ LT + +NQ +I Y E + AR LF+S+ S W+
Sbjct: 39 RTIHAHLTITNHNYRDSKVNQL----NSLINLYVKCDEVSIARKLFDSMPRRNVVS--WS 92
Query: 80 TMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
++ Y NG+ +E EL+ M + I N Y + +C S + +EGK HG ++
Sbjct: 93 ALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDS-QMYVEGKQCHGYALK 151
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
+G YV+ AL+ +Y+KC ++ + D+ + +++ Q EA+ +
Sbjct: 152 SGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDV 211
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
+ EG+ ++ T V++ L D+ + VH + + D+ I +SI+ MY +
Sbjct: 212 LKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGK 271
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CGNV R FD ++ R+++SW S++ Y QN EAL LF +M+ PN T +L
Sbjct: 272 CGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVL 331
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
++ L + LG + H S +K + + NA++ MY K GD+ A+++F+++ +
Sbjct: 332 FNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNM--TCC 389
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
N+ +WN +I G+ HG G++AL F M+ G +P+++TF ++ AC+H L+DEG F
Sbjct: 390 NIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYF 449
Query: 439 AD-MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-- 495
M + + P ++HY C+V +L R+G L EA + ++ + + W LL AC +H
Sbjct: 450 NHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKH 509
Query: 496 ---GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
G A YL QLEP G ++L+SN++A +W V ++R+ M+ + +KK S +E
Sbjct: 510 YDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLE 569
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYH 612
F + D +P +Y+ V+ + +I+ GY+PD+ LHD+EDE + L+YH
Sbjct: 570 IRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYH 629
Query: 613 SEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
SEKLAVA+G+M A + V KNLR+C+DCH+A + IS + R I+VRDANRFHHF+ G
Sbjct: 630 SEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNG 689
Query: 673 TCSCNDYW 680
CSC DYW
Sbjct: 690 CCSCGDYW 697
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/643 (32%), Positives = 356/643 (55%), Gaps = 10/643 (1%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
+G+ +I Y+ G + AR +F+ I + + W M+ Y+ N TL+++S MR
Sbjct: 568 VGSALIDAYSMCGVVSDARRVFDGIVGKDAVA--WTAMVSCYSENDCPENTLQIFSKMRV 625
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+ N + VL+A S ++ GK +H ++T + ++ +V AL+DMYAKCG +D
Sbjct: 626 AVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIED 685
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
F+ ++ D++ W++MI+ Y Q + E+A LF + + + + ++ SV A
Sbjct: 686 ARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACAN 745
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ + + +H +AI +L + N+++ +YA+C ++E + +F + + +SWN++
Sbjct: 746 MPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTI 805
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ GY ++G AL +F EM+ + VT ++ AC S + H I S
Sbjct: 806 IVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTF 865
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
D + N+++D YAKCG + A +F + E ++ SWN +I+GY +HG A E F
Sbjct: 866 NSDTIVSNSLIDSYAKCGCIRDAREIFETL--KECDLVSWNAIISGYAVHGQAAMAQELF 923
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGR 462
M + +K + ITF ++LS C GL+ +G F M ++P ++HY C+V +LGR
Sbjct: 924 DMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGR 983
Query: 463 AGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLM 517
AG L +A + I +P P+ VW ALL +C +H G +A + ++EP+ +VL+
Sbjct: 984 AGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLL 1043
Query: 518 SNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKV 577
SN+Y+A+ +V R+ M+N G++K S +E ++ F +P + + +
Sbjct: 1044 SNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAML 1103
Query: 578 ESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNL 637
E + ++ GY+PD LHD+E+E + ML HSE+LA+A+G++ P +++ KNL
Sbjct: 1104 EWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNL 1163
Query: 638 RVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
R C DCH+ F+ IS I +++IIVRD NRFHHFE GTCSC DYW
Sbjct: 1164 RSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 243/503 (48%), Gaps = 16/503 (3%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNS 67
Y +LL+ C R +H + SG + + A +++ YT G +A +F+
Sbjct: 431 YARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDG 490
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ SF+ T+++ +A G E L+ +R G N + VLK + +
Sbjct: 491 LPERNMVSFV--TLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLG 548
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
VH + G +++V +AL+D Y+ CG D +VFD + +D V+WT M++ Y
Sbjct: 549 LAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYS 608
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ + PE L +F K + + + SV A L V+ + +H ++ + +
Sbjct: 609 ENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERH 668
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ +++ MYA+CGN+E ARL F+M+ D+I W+ M++ Y Q Q +A LF M S
Sbjct: 669 VYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSS 728
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN + ++ AC + LG++ H + I + + + NA++D+YAKC D++++
Sbjct: 729 VSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSL 788
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + + N SWN +I GY G G AL F +M V +T++S+L AC+
Sbjct: 789 EIFSSLR--DVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACAS 846
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSV 484
I+ + + K + + ++D + GC+ +A F+ +K+ L
Sbjct: 847 TASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDL----VS 902
Query: 485 WGALLLACRIHGEIA-ANYLFQL 506
W A++ +HG+ A A LF +
Sbjct: 903 WNAIISGYAVHGQAAMAQELFDM 925
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 207/417 (49%), Gaps = 23/417 (5%)
Query: 43 HLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR 102
H+ ++ Y G AR F + ND LW+ MI YA + EL+ M
Sbjct: 668 HVYGALLDMYAKCGNIEDARLAFEMVTNDDV--ILWSLMISRYAQCNQNEQAFELFIRMM 725
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
RS +S N ++ VL+ACA+ L+ GK +H I+ G S+ +V AL+D+YAKC +
Sbjct: 726 RSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDME 785
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
++F + + VSW +I Y ++ E AL +F++ + + S VT SV A
Sbjct: 786 SSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACA 845
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
+ VH + F D + NS++ YA+CG + AR +F+ +++ DL+SWN+
Sbjct: 846 STASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNA 905
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
+++GY +GQA+ A LFD M + K N +T + L+S C GS L + G + +
Sbjct: 906 IISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVC---GSTGLVSQ--GLSLFDS 960
Query: 343 MKIDATLRNA------VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH- 395
M++D + + ++ + + G L+ A N DI PS + W L++ +H +
Sbjct: 961 MRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDI-PSAPSAMVWRALLSSCIVHKNV 1019
Query: 396 --GRKALEFFSQMLEEGVKP-DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
GR + E ++LE ++P D T+ + + S AG +D+ M + V+ E
Sbjct: 1020 ELGRFSAE---KVLE--IEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKE 1071
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 184/370 (49%), Gaps = 4/370 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLS--DSYVQAALVDMYAKCGQTDDGCK 166
+SY + +L+ C + G+ VHG ++R+G L+ D + L++MY K G +
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
VFD + R++VS+ ++ + + EEA LFQ+ + EG + + +V V +
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ A VH A + + ++++ Y+ CG V AR VFD + +D ++W +M++
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y +N L +F +M+ + K NP ++ A L S LG+ H + + +
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTE 666
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ A++DMYAKCG+++ A F + + +V W+++I+ Y +A E F +M
Sbjct: 667 RHVYGALLDMYAKCGNIEDARLAFEMV--TNDDVILWSLMISRYAQCNQNEQAFELFIRM 724
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
+ V P+ + +S+L AC++ L+D G++ K+ + E+ ++D+ + +
Sbjct: 725 MRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDM 784
Query: 467 YEAFDMIKQM 476
+ ++ +
Sbjct: 785 ESSLEIFSSL 794
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 6/127 (4%)
Query: 6 PSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
PST+ Y +L++C AS+ Q+H L N + +I Y G AR
Sbjct: 831 PSTQVTYSSVLRACASTASINHVGQVH-CLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAR 889
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F ++ S WN +I YA +G EL+ M ++ I +N TF +L C S
Sbjct: 890 EIFETLKECDLVS--WNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGS 947
Query: 123 NSLILEG 129
L+ +G
Sbjct: 948 TGLVSQG 954
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/685 (33%), Positives = 372/685 (54%), Gaps = 81/685 (11%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q H+ + SG N ++ AK+I Y+ Y N A + SI + YSF +++I A
Sbjct: 36 QAHARILKSGAQNDG-YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSF--SSLIYALT 92
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+++ ++S M G+ +S+ P + K CA S GK +H +G D++
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRD------------------------------- 175
VQ ++ MY +CG+ D KVFD MS +D
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 176 ----LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+VSW +++ + ++ +EA+++FQK G D VT+ SV +VG + +
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNV----------------------------- 262
+HGY I L+D C+ ++++ MY + G+V
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 263 --EKARLVFDMMEKR----DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+KA +F++ +++ +++SW S++ G QNG+ EAL LF EMQ + KPN VT
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC + + GR HG+ + ++ + + +A++DMYAKCG ++ ++ +FN + P+
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN-MMPT 451
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+N+ WN L+ G+ MHG ++ + F ++ +KPD I+FTS+LSAC GL DEG K
Sbjct: 452 -KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F M++ +KP ++HY+CMV++LGRAG L EA+D+IK+MP P+ VWGALL +CR+
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
EIAA LF LEPE+ G +VL+SNIYAA W EV +R M++ GLKK S
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
I+ + D+ +P ++ +K++ ++ E++ +G+ P+L ALHDVE++++E ML
Sbjct: 631 IQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLW 690
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTK 635
HSEKLAV FG++N +QV +
Sbjct: 691 GHSEKLAVVFGLLNTPDGTPLQVER 715
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/526 (37%), Positives = 314/526 (59%), Gaps = 9/526 (1%)
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
D ++FD++ D+V + M Y + + P A++L + GLL D T S+ A
Sbjct: 86 DHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKAC 145
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+L + + + +H A+ +++ + +++ MY C +V+ AR VFD + + ++++N
Sbjct: 146 ARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYN 205
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+++T +N + +EAL LF E+Q S KP VT L+ +S+C LG+ LGR H Y+ +
Sbjct: 206 AIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKN 265
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ A++DMYAKCG LD A ++F D+ R+ +W+ +I Y HGHG +A+
Sbjct: 266 GFDQYVKVNTALIDMYAKCGSLDDAVSVFKDM--PRRDTQAWSAMIVAYATHGHGSQAIS 323
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDML 460
+M + V+PD ITF IL ACSH GL++EG + F MT + + P +KHY CM+D+L
Sbjct: 324 MLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLL 383
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFV 515
GRAG L EA I ++P+ P +W LL +C HG ++ +F+L+ H G +V
Sbjct: 384 GRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYV 443
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
++SN+ A + +W +V LR+ M +KG K S IE + F + D V+ ++
Sbjct: 444 ILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTSTILHH 503
Query: 576 KVESMAVEIKMAGYMPDLSCALH-DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
++ + E+K+AGY+PD S + D+EDE++E +L YHSEKLA+ +G++N P ++V
Sbjct: 504 ALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGTTIRVV 563
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH+A +FIS I+ R+II+RD RFHHF+ G CSC DYW
Sbjct: 564 KNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 197/400 (49%), Gaps = 13/400 (3%)
Query: 15 LLKSCNFLASLRQIHS-SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
L+ C L L+QI + ++ T L T + A +F+ I +
Sbjct: 41 LIPKCTSLRELKQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKI--PQP 98
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
L+NTM R YA + + L S + SG+ + YTF +LKACA + EGK +H
Sbjct: 99 DIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLH 158
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
++ G + YV L++MY C D +VFD++ +V++ +IT+ + +P
Sbjct: 159 CLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPN 218
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EAL LF++ Q+ GL VT++ S+ LG + + +H Y N F + + + +++
Sbjct: 219 EALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALI 278
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
MYA+CG+++ A VF M +RD +W++M+ Y +G S+A+ + EM+ + +P+ +
Sbjct: 279 DMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEI 338
Query: 314 TALILVSACTYLGSRQLGRKF-----HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
T L ++ AC++ G + G ++ H Y I ++K ++D+ + G L+ A
Sbjct: 339 TFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIK----HYGCMIDLLGRAGRLEEACK 394
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+++ P + W L++ HG+ A ++ E
Sbjct: 395 FIDEL-PIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFE 433
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/500 (39%), Positives = 312/500 (62%), Gaps = 8/500 (1%)
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
KVF+ M RD+VSW +I+ Q E+AL++ ++ L DS T+ SV +
Sbjct: 151 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 210
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
++LK + +HGYAI N + D+ I +S++ MYA+C V+ + VF M+ + D ISWNS++
Sbjct: 211 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 270
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
G +QNG E L F +M + KPN V+ ++ AC +L + LG++ HGYII S
Sbjct: 271 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 330
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ + +A++DMYAKCG++ TA +F+ + + + SW +I GY +HGH A+ F +
Sbjct: 331 NVFIASALVDMYAKCGNIRTARWIFDKMELYD--MVSWTAMIMGYALHGHAYDAISLFKR 388
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M EGVKP+++ F ++L+ACSHAGL+DE K F MT+ + P ++HYA + D+LGR G
Sbjct: 389 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 448
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA++ I M + P SVW LL ACR+H E + LF ++P++ G +VL+SN
Sbjct: 449 RLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 508
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
IY+A+ +W++ KLR M++KG+KK A S IE + F D+ +PY+ + + ++
Sbjct: 509 IYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKV 568
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ +++ GY+ D + LHDVE+E + ++L HSE+LA+ FGI++ ++VTKNLRV
Sbjct: 569 LLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRV 628
Query: 640 CNDCHSAFRFISYIYRRKII 659
C DCH+A +FIS I R+I+
Sbjct: 629 CVDCHTATKFISKIVGREIV 648
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 188/362 (51%), Gaps = 7/362 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WNT+I A NG + L + M + + +S+T VL A +L+GK +HG I
Sbjct: 164 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 223
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R G+ +D ++ ++L+DMYAKC + DD C+VF + D +SW +I Q +E L
Sbjct: 224 RNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLK 283
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
FQ+ + + V+ S+ A L + + +HGY I + F ++ I +++V MYA
Sbjct: 284 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA 343
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CGN+ AR +FD ME D++SW +M+ GY +G A +A+ LF M+ KPN V +
Sbjct: 344 KCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMA 403
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHP 375
+++AC++ G K+ + + +I L + AV D+ + G L+ A +D+H
Sbjct: 404 VLTACSHAGLVDEAWKYFNS-MTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH- 461
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC-SHAGLIDEG 434
E S W+ L+A +H + A + ++ V P +I +LS S AG +
Sbjct: 462 IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFT--VDPQNIGAYVLLSNIYSAAGRWKDA 519
Query: 435 RK 436
RK
Sbjct: 520 RK 521
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 205/448 (45%), Gaps = 29/448 (6%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M SG + FP VLK+C + G+ VHG IIR G D Y AL++MY+K
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
++G V+ ++ E P E L + V +
Sbjct: 61 LEEG-------GVQRFCDSKMLGGIPE----PREIGKCSNSHDLPCELDERVAGIDQNGD 109
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
+ Q+ ++L + D+ + + Y + R VF+MM KRD++SW
Sbjct: 110 LNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVFEMMPKRDIVSW 164
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N++++G QNG +AL++ EM N+D +P+ T ++ + G++ HGY I
Sbjct: 165 NTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIR 224
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ D + ++++DMYAKC +D + +F + P + SWN +IAG +G + L
Sbjct: 225 NGYDADVFIGSSLIDMYAKCTRVDDSCRVFYML-PQHDGI-SWNSIIAGCVQNGMFDEGL 282
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
+FF QML +KP+H++F+SI+ AC+H + G++ + + V + +VDM
Sbjct: 283 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 342
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE----IAANYLFQLEPEHTGYFVL 516
+ G + A + +M L S W A+++ +HG I+ ++E Y
Sbjct: 343 AKCGNIRTARWIFDKMELYDMVS-WTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAF 401
Query: 517 MSNIYAASN------KWREVGKLREDMK 538
M+ + A S+ W+ + +D +
Sbjct: 402 MAVLTACSHAGLVDEAWKYFNSMTQDYR 429
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/651 (35%), Positives = 360/651 (55%), Gaps = 28/651 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y EP A +F+S+ S W+ ++ + NG +L L+S M R GI
Sbjct: 418 LIDMYCKCREPLMAYKVFDSMPERNVVS--WSALMSGHVLNGDLKGSLSLFSEMGRQGIY 475
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N +TF LKAC + + +G +HG ++ GF V +LVDMY+KCG+ ++ KV
Sbjct: 476 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 535
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL--LSDSVTIVSVASAVGQLG 225
F + R L+SW MI + A +AL F Q+ + D T+ S+ A G
Sbjct: 536 FRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTG 595
Query: 226 DVLKAQAVHGYAICNAF--LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ + +HG+ + + F I S+V +Y +CG + AR FD ++++ +ISW+S+
Sbjct: 596 MIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSL 655
Query: 284 LTGYIQNGQASEALLLFDEMQ--NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+ GY Q G+ EA+ LF +Q NS ++++I V A + RQ G++ +
Sbjct: 656 ILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA-DFALLRQ-GKQMQALAVKL 713
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
++ ++ N+V+DMY KCG +D AE F ++ ++V SW V+I GYG HG G+K++
Sbjct: 714 PSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL--KDVISWTVVITGYGKHGLGKKSVR 771
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDML 460
F +ML ++PD + + ++LSACSH+G+I EG + F+ + + +KP V+HYAC+VD+L
Sbjct: 772 IFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLL 831
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFV 515
GRAG L EA +I MP+ PN +W LL CR+HG+I L +++ ++ +V
Sbjct: 832 GRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYV 891
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR---VNPYWKE 572
+MSN+Y + W E G RE KGLKK A S +E +++ F + + + P +E
Sbjct: 892 MMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQE 951
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV----AFGIMNLTPE 628
K+ E E GY+ L LHD++DE +E L HSEKLA+ A G +N +
Sbjct: 952 TLKEAERRLRE--ELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGK 1009
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
++V KNLRVC DCH + +S I + +VRDA RFH FE G CSC DY
Sbjct: 1010 T-IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 14/269 (5%)
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+L N ++ MY +C A VFD M +R+++SW+++++G++ NG +L LF EM
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
PN T + AC L + + G + HG+ + ++ + N+++DMY+KCG ++
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK--PDHITFTSIL 422
AE +F I +R++ SWN +IAG+ G+G KAL+ F M E +K PD T TS+L
Sbjct: 531 EAEKVFRRI--VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 588
Query: 423 SACSHAGLIDEGRKC--FADMTKLSVKPEVKHYACMVDMLGRAGCLY---EAFDMIKQMP 477
ACS G+I G++ F + +VD+ + G L+ +AFD IK+
Sbjct: 589 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 648
Query: 478 LPPNDSVWGALLLACRIHGE-IAANYLFQ 505
+ W +L+L GE + A LF+
Sbjct: 649 MIS----WSSLILGYAQEGEFVEAMGLFK 673
>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
Length = 601
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/605 (35%), Positives = 343/605 (56%), Gaps = 14/605 (2%)
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA--SNSLILEGKVVHGDIIRTGF 141
AY N + L+L+ + N T+ VLK+CA + + +GK +H I GF
Sbjct: 3 AYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQGF 62
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+D VQ +L+ MYAKCG VFD+M ++L+S+T MI AY K EA L++K
Sbjct: 63 GTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELYKK 122
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
EG++ D I + A+A+ + + +A+H + N N++V MY R G
Sbjct: 123 MLSEGIMPD---IYAYAAALAVCPTIREGEAIH-VKLGNHERRTPVCSNALVGMYGRFGR 178
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+ A+ VFD + +DL S+N+M+ + + S+A+ L+ EM+ + +PN T ++ A
Sbjct: 179 IASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDA 238
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C+ LG+ G++ H + + D A+++MYAKCG A +FND +NV
Sbjct: 239 CSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDC--GLKNVF 296
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
+W L++ Y G + LE + +M EGV PD +TFT+I +ACSH+GL DEG F M
Sbjct: 297 TWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAM 356
Query: 442 TKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-- 498
+ + P HY CM+D+LGR G L EA ++++ MP P+ W LL AC+++G++
Sbjct: 357 REDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKI 416
Query: 499 ---AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
A + +L P +G ++LM N+YA + KW +V ++++ +K +GL KP S+IE +
Sbjct: 417 GARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQR 476
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
I F D +P +E+ +++ + ++ AGY PD L DV +E + +L +HSE+
Sbjct: 477 RIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSER 536
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
+A+ G++ A + + KNLR+C DCHS F+ +S + RK++VRD++RFH F+ G+CS
Sbjct: 537 MALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCS 596
Query: 676 CNDYW 680
C DYW
Sbjct: 597 CGDYW 601
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 205/491 (41%), Gaps = 63/491 (12%)
Query: 9 EGFYDQLLKSC-----NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
+ Y +LKSC ++L ++IH G L + +I Y G A
Sbjct: 29 QATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQGF-GTDLVVQNSLIHMYAKCGSFKFAAG 87
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+ + S+ +MI+AY + VE ELY M GI + Y + L C +
Sbjct: 88 VFDKMEPKNLISY--TSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPT- 144
Query: 124 SLILEGKVVHGDI----IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
I EG+ +H + RT S+ ALV MY + G+ VFD + +DL S+
Sbjct: 145 --IREGEAIHVKLGNHERRTPVCSN-----ALVGMYGRFGRIASAKWVFDGIRYKDLASY 197
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
MI + + + +A+ L+ + + L + T SV A +LG + + + +H
Sbjct: 198 NNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDACSKLGALTEGKEIHKKVKG 257
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
D+ ++V MYA+CG+ +AR VF+ +++ +W S+++ Y Q GQ+ L
Sbjct: 258 GDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEA 317
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYA 358
+ M P+ VT + +AC++ G G + + + + M D+
Sbjct: 318 YQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLG 377
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+ G L AE + + P +V +W +L
Sbjct: 378 RVGRLREAEELVRTM-PYSPDVVTWTIL-------------------------------- 404
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC---LYEAFDMIKQ 475
LSAC G + G + + +T+L+ P+ Y M +M +AG + E MIKQ
Sbjct: 405 ---LSACKVYGDLKIGARAYKRITELN-PPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQ 460
Query: 476 MPL--PPNDSV 484
L PP S+
Sbjct: 461 RGLAKPPGKSM 471
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/640 (34%), Positives = 353/640 (55%), Gaps = 56/640 (8%)
Query: 47 KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI 106
++I + G+ N+A +F S+ + + WN+M+ Y+N RR I
Sbjct: 10 RVITNHIRSGDLNSALRVFESMTVKTTVT--WNSMLAGYSN--------------RRGKI 53
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
F I E + +I+ +L ++ V++A +
Sbjct: 54 KVARQLF----------DRIPEPDIFSYNIMLACYLHNADVESARL-------------- 89
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
FD+M V+D SW MI+ + Q ++A LF + +SV+ ++ S + GD
Sbjct: 90 FFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMP----VRNSVSWNAMISGYVESGD 145
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ A+ + A + + +++ + + G +E A F+ M ++L++WN+M+ G
Sbjct: 146 LDLAKQLFEVAP----VRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAG 201
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
YI+N QA L LF M S +PNP + ++ C+ L + +LG++ H I S + +
Sbjct: 202 YIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWN 261
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
T +++ MY KCGDL+ A +F + +++V +WN +I+GY HG G KAL F +M
Sbjct: 262 ITAGTSLLSMYCKCGDLEDAWKLF--LVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKM 319
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGC 465
+EG+KPD ITF ++LSAC+HAG +D G + F M + V+ + HY C+VD+LGR G
Sbjct: 320 RDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGK 379
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNI 520
L EA D+IK+MP P+ +++G LL ACRIH E AA L L+PE +V ++N+
Sbjct: 380 LVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANV 439
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
YAA N+W V +R MK+ + K +S IE + F + DR++P +++K+ +
Sbjct: 440 YAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNEL 499
Query: 581 AVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVC 640
++++AGY+PDL ALHDV +E ++ +L HSEKLA+A+G++ + ++V KNLRVC
Sbjct: 500 ERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVC 559
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCHSA ++IS I R IIVRD RFHHF G CSC DYW
Sbjct: 560 GDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 137/335 (40%), Gaps = 73/335 (21%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI-QNGQASEALLLFDEMQNSDC 308
N ++ + R G++ A VF+ M + ++WNSML GY + G+ A LFD +
Sbjct: 9 NRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIP---- 64
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYI-----INSNMKIDATLRNAVMDM------- 356
+P+ + I+++ + + R F + + N I +N +MD
Sbjct: 65 EPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLV 124
Query: 357 ---------------YAKCGDLDTAENMFNDIHPSE------------------------ 377
Y + GDLD A+ +F ++ P
Sbjct: 125 MPVRNSVSWNAMISGYVESGDLDLAKQLF-EVAPVRSVVAWTAMITGFMKFGKIELAEKY 183
Query: 378 ------RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+N+ +WN +IAGY + L+ F +M+E G +P+ + +S+L CS+ +
Sbjct: 184 FEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSAL 243
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLL 490
G++ + K V + ++ M + G L +A+ + + +P D V W A++
Sbjct: 244 KLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLF--LVMPQKDVVTWNAMIS 301
Query: 491 ACRIHGE-IAANYLFQ------LEPEHTGYFVLMS 518
HG A YLF ++P+ + ++S
Sbjct: 302 GYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLS 336
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/614 (34%), Positives = 343/614 (55%), Gaps = 16/614 (2%)
Query: 77 LWNTMIRAYANNGHCVETL----ELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
LW+ R +++ L +L++ SG +++ +T ++ A A + + +
Sbjct: 101 LWSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAAREL 160
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
I R +S + L Y K G K+FDEM R++ +W M+
Sbjct: 161 FERIPRRNVMSWNI----LFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFD 216
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EE+L F ++EG+ D + SV L DV+ + VH Y + + D+C+ +S+
Sbjct: 217 EESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSL 276
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
MY RCG +++ V M+ ++S N+++ G QNG + AL F M++ +
Sbjct: 277 AHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADV 336
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT + +S+C+ L + G++ HG ++ + + + ++ MY++CG L +E +F
Sbjct: 337 VTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFG 396
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
S+ + S +I+ YG HGHG+KA+E F QM+ G +P +TF ++L ACSH+GL +
Sbjct: 397 YCGSDTFLLS--AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKE 454
Query: 433 EGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG CF MTK ++P VKHY C+VD+LGR+GCL EA +I MPL P+ +W LL A
Sbjct: 455 EGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C+ E A + +L+P + +VL+SNI A S +W +V ++R+ M++ ++K
Sbjct: 515 CKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEP 574
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S +E I F T D +P KE+ + +E M +I+ GY PD+S LHD+EDE++E
Sbjct: 575 GVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKE 634
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
L++HSEKLA+AF ++L ++V KNLRVC+DCH A + +S + R+I+VRD +RF
Sbjct: 635 VSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRF 694
Query: 667 HHFEGGTCSCNDYW 680
HHF+ G CSC DYW
Sbjct: 695 HHFKDGRCSCRDYW 708
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 175/408 (42%), Gaps = 32/408 (7%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI-- 68
+ L ++C L LRQ+H+ TSG +++ Y G+ AR LF I
Sbjct: 108 LFSHLFRACRALRPLRQLHAFAATSGAATDRF-TANHLMLAYADLGDLTAARELFERIPR 166
Query: 69 HNDKSYSFL---------------------------WNTMIRAYANNGHCVETLELYSTM 101
N S++ L WN M+ N G E+L + M
Sbjct: 167 RNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDM 226
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
RR G+ + + V + CA ++ G+ VH ++R+G D V ++L MY +CG
Sbjct: 227 RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCL 286
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
+G V + +VS +I Q E AL F + G+ +D VT VS S+
Sbjct: 287 QEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC 346
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L + + Q +HG + + + + +V MY+RCG + + VF D +
Sbjct: 347 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 406
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIIN 340
+M++ Y +G +A+ LF +M N +P+ VT L L+ AC++ G ++ G F
Sbjct: 407 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 466
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
M+ V+D+ + G LD AE + + P + W L++
Sbjct: 467 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSM-PLTPDGVIWKTLLS 513
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG-EPNTARSLFNSIHND 71
+ SC+ LA+L +QIH + +G +++ + + ++ Y+ G ++ R F +D
Sbjct: 343 ISSCSDLAALAQGQQIHGQVMKAG-VDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSD 401
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+FL + MI AY +GH + +EL+ M G + TF +L AC+ + L EG
Sbjct: 402 ---TFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMD 458
Query: 132 VHGDIIRTGFLSDSYVQ-AALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA---- 185
+ +T + S +VD+ + G D+ + M + D V W +++A
Sbjct: 459 CFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQ 518
Query: 186 --YEQAEKPEEALI 197
++ AE+ + +I
Sbjct: 519 KNFDMAERIAKRVI 532
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 229/685 (33%), Positives = 363/685 (52%), Gaps = 23/685 (3%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ +LK C L +L R HS+ G+ ++ G ++ Y G + A +F+ +
Sbjct: 111 FPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGM 170
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLIL 127
+ WN+M+ Y +NG L + M + + + L AC S ++
Sbjct: 171 PARDVVT--WNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALM 228
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+G+ VH +IR G D V +++DMY KCG VF M R +V+W MI Y
Sbjct: 229 QGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYA 288
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
E+PEEA F + + EG + VT +++ +A Q L ++VHGY FL +
Sbjct: 289 LNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVV 348
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
++ +++ MY++ G V+ + VF M + L+SWN+M+ Y+ EA+ LF ++ N
Sbjct: 349 LETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQP 408
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
P+ T +V A LG + R+ H YII + + NA+M MYA+CGD+ ++
Sbjct: 409 LYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSR 468
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + + ++V SWN +I GY +HG GR ALE FS+M G++P+ TF S+L+ACS
Sbjct: 469 EIFDKM--AAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSV 526
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+GL DEG F M + + P+++HY CM D+LGRAG L E I+ MP+ P VWG
Sbjct: 527 SGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWG 586
Query: 487 ALLLACRIHGEI-----AANYLFQLEPEH-----TGYFVLMSNIYAASNKWREVGKLRED 536
+LL A R +I AA +FQLE + TG +VL+S++YA + +W++V +++
Sbjct: 587 SLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKSL 646
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD-LSC 595
M+ KGL++ S++E F D +P K + + ++ +I G M D ++
Sbjct: 647 MEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKI---GEMRDPMNQ 703
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
+ D R N HS +LAV FG+++ + V KN+R+CNDCH A + IS
Sbjct: 704 SDPTSLDSRRTTEPNKHSVRLAVVFGLISTEARTPILVKKNVRICNDCHHALKLISKYSG 763
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R+I+V D N +H F G+C C DYW
Sbjct: 764 RRIVVGDTNIYHQFSDGSCCCGDYW 788
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 210/425 (49%), Gaps = 5/425 (1%)
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+FL N +IR A+ G L Y+ M +G + +TFP VLK CA + EG+ H
Sbjct: 73 AFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTFPVVLKCCARLGALDEGRAAHS 132
Query: 135 DIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
IR G +D Y +L+ YA+ G DD +VFD M RD+V+W M+ Y
Sbjct: 133 AAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGT 192
Query: 194 EALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
AL+ F++ + + D V I++ +A +++ + VH Y I + D+ + SI
Sbjct: 193 LALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSI 252
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ MY +CG++ A VF M R +++WN M+ GY N + EA F +M+ +
Sbjct: 253 LDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEV 312
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VTA+ L++AC S GR HGYI L A+++MY+K G + ++E +F
Sbjct: 313 VTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQ 372
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ + + + SWN +IA Y +A+ F +L + + PD+ T ++++ A GL+
Sbjct: 373 M--TTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLR 430
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
+ R+ + + +L ++ M R G + + ++ +M S W +++
Sbjct: 431 QCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVIS-WNTMIMGY 489
Query: 493 RIHGE 497
IHG+
Sbjct: 490 AIHGQ 494
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 163/329 (49%), Gaps = 4/329 (1%)
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
+LV +A G+ DD + RD V+I A P AL + G
Sbjct: 47 SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAI-CNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
D T V +LG + + +A H AI D+ NS++A YAR G V+ A V
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS-DCKPNPVTALILVSACTYLGS 327
FD M RD+++WNSM+ GY+ NG + AL+ F EM + + + + V + ++AC +
Sbjct: 167 FDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESA 226
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
GR+ H Y+I M+ D + +++DMY KCGD+ +AE +F + PS R V +WN +I
Sbjct: 227 LMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATM-PS-RTVVTWNCMI 284
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
GY ++ +A + F QM EG + + +T ++L+AC+ GR +T+
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
P V +++M + G + + + QM
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQM 373
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/666 (32%), Positives = 359/666 (53%), Gaps = 12/666 (1%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L + QIHS + G + +L + ++ Y + A LF+ + S SF N M
Sbjct: 159 LKEVLQIHSHIIRFGF-SASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSF--NVM 215
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I Y G E L+L+ MR + +TF +L + ++ G+ +HG I+T +
Sbjct: 216 ITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSY 275
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
+ D +V AL+D Y+K D +FDEM D VS+ ++IT Y + E++ LF++
Sbjct: 276 VWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKR 335
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
Q + ++ S ++ + H A+ + ++ + N++V MYA+C
Sbjct: 336 LQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEK 395
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
E A +F + R+ + W ++++ Y+Q G EAL +F EM + + T + A
Sbjct: 396 FEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKA 455
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
L S LG++ H +I + + ++DMYA CG + A +F ++ +RN+
Sbjct: 456 SANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEM--PDRNIV 513
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
WN LI+ Y +G F+ M+E G+ PD ++F S+L+ACSH GL+++ F M
Sbjct: 514 CWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSM 573
Query: 442 TKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
T++ + P KHYA M+D+L R+G EA ++I +MP P++ +W ++L +CRIH
Sbjct: 574 TQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDL 633
Query: 496 GEIAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
+ AA+ LF+++ +V MSNIYA + KW K+++ M+ +G+KK A+S +E
Sbjct: 634 AKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEID 693
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+ F DR +P +++ +K+ S+ + GY PD SC L +V++E + L YHSE
Sbjct: 694 HRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSE 753
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
+LA+AF ++N + + + KNLR C DCH+A + IS I R+I VRD++RFHHF G+C
Sbjct: 754 RLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSC 813
Query: 675 SCNDYW 680
SC DYW
Sbjct: 814 SCGDYW 819
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 221/444 (49%), Gaps = 9/444 (2%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
AR LF S+ + S W MI Y+ N E LY+ M RSG+ + TF +L
Sbjct: 96 ARELFESMFSRNEVS--WTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGF 153
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ + E +H IIR GF + V +LVD Y K D ++F EM +D VS+
Sbjct: 154 DDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFN 213
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
VMIT Y + EEAL LF + + T ++ DV+ Q +HG AI
Sbjct: 214 VMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKT 273
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+++ D+ + N+++ Y++ ++ A+ +FD M + D +S+N ++TGY NGQ ++ LF
Sbjct: 274 SYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLF 333
Query: 301 DEMQNS--DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
+Q + D K P ++ V+A + +GR+ H + + + + NA++DMYA
Sbjct: 334 KRLQGTSFDRKNFPFATMLSVAAIEL--NLSMGRQTHAQAVVTTAVSEVQVGNALVDMYA 391
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KC + A +F ++ + RN W +I+ Y G +AL+ F +M E V D TF
Sbjct: 392 KCEKFEDANRIFANL--AYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATF 449
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
S L A ++ + G++ + + +L + V + +VDM G + +A ++ K+MP
Sbjct: 450 ASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP- 508
Query: 479 PPNDSVWGALLLACRIHGEIAANY 502
N W AL+ A +G+ A +
Sbjct: 509 DRNIVCWNALISAYSQNGDAEATF 532
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 154/312 (49%), Gaps = 2/312 (0%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
+V Y K ++F+ M R+ VSWT+MI Y Q +P+EA L+ + + G+ D
Sbjct: 83 MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
+T ++ S + + +H + I F L + NS+V Y + ++ A +F
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M +D +S+N M+TGY + G EAL LF +M+N D +P+ T ++
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G++ HG I ++ D + NA++D Y+K +D A+N+F+++ E + S+N++I GY
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEM--PELDGVSYNIIITGY 320
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
+G K+ + F ++ + F ++LS + + GR+ A + EV
Sbjct: 321 AWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEV 380
Query: 451 KHYACMVDMLGR 462
+ +VDM +
Sbjct: 381 QVGNALVDMYAK 392
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 2/228 (0%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N +V+ Y + N+ +AR +F+ M R+ +SW M+ GY QN Q EA L+ EM S K
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P+ +T L+S + + + H +II + N+++D Y K LD A +
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQL 200
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F+++ P++ +V S+NV+I GY +G +AL+ F QM +P TF ++L +
Sbjct: 201 FSEM-PTKDSV-SFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSE 258
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ G++ K S ++ ++D + + A ++ +MP
Sbjct: 259 DVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMP 306
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/520 (39%), Positives = 309/520 (59%), Gaps = 18/520 (3%)
Query: 175 DLVSWTVMITAYEQA--EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
D + +I A+ Q KP AL + ++ + + T V A + + A
Sbjct: 190 DAFLFNTLIRAFAQTTHSKPH-ALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGA 248
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARC------GNVEKARLVFDMMEKRDLISWNSMLTG 286
VH + F ED ++N++V MY C G V A+ VFD +D ++W++M+ G
Sbjct: 249 VHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVS-AKKVFDESPVKDSVTWSAMIGG 307
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y + G ++ A+ LF EMQ + P+ +T + ++SAC LG+ +LG+ YI N+
Sbjct: 308 YARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRS 367
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
L NA++DM+AKCGD+D A +F ++ R + SW +I G MHG G +A+ F +M
Sbjct: 368 VELCNALIDMFAKCGDVDRAVKVFREM--KVRTIVSWTSMIVGLAMHGRGLEAVLVFDEM 425
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGC 465
+E+GV PD + F +LSACSH+GL+D+G F M + S+ P+++HY CMVDML RAG
Sbjct: 426 MEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGR 485
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNI 520
+ EA + ++ MP+ PN +W +++ AC GE+ A L + EP H +VL+SNI
Sbjct: 486 VNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNI 545
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
YA +W + K+RE M KG++K ++IE +I F D+ + +KE+Y+ VE M
Sbjct: 546 YAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEM 605
Query: 581 AVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVC 640
EIK AGY+P S L D+++ED+E L HSEKLA+AF +++ P +++ KNLRVC
Sbjct: 606 GREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVC 665
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCHSA +FIS +Y R+I+VRD NRFHHF+ G CSC D+W
Sbjct: 666 EDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 215/439 (48%), Gaps = 70/439 (15%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIH--------NDKSY---- 74
QIHS + GL H ++ K+ S FN++H ND++
Sbjct: 140 QIHSLILKLGL-----HHNPLVLTKFAA------TSSHFNAVHYASSVLFPNDQTTPPPS 188
Query: 75 --SFLWNTMIRAYANNGHC-VETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+FL+NT+IRA+A H L Y+TMRR +S N +TFPFVLKACA + G
Sbjct: 189 HDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGA 248
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC-------KVFDEMSVRDLVSWTVMIT 184
VH +++ GF D +V+ LV MY C Q DG KVFDE V+D V+W+ MI
Sbjct: 249 VHASMVKFGFEEDPHVRNTLVHMYCCCCQ--DGSSGPVSAKKVFDESPVKDSVTWSAMIG 306
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Y +A A+ LF++ Q G+ D +T+VSV SA LG + + + Y +
Sbjct: 307 GYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMR 366
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ + N+++ M+A+CG+V++A VF M+ R ++SW SM+ G +G+ EA+L+FDEM
Sbjct: 367 SVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMM 426
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
P+ V + ++SAC++ G L K H Y +
Sbjct: 427 EQGVDPDDVAFIGVLSACSHSG---LVDKGHYY-------------------------FN 458
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
T ENMF+ I P + + ++ G +ALEF M V+P+ + + SI++A
Sbjct: 459 TMENMFS-IVP---KIEHYGCMVDMLSRAGRVNEALEFVRAM---PVEPNQVIWRSIVTA 511
Query: 425 CSHAGLIDEGRKCFADMTK 443
C G + G ++ +
Sbjct: 512 CHARGELKLGESVAKELIR 530
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/600 (36%), Positives = 345/600 (57%), Gaps = 30/600 (5%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
MR SSN T + K ++L K VH +I TG + +Y + ++ + +
Sbjct: 1 MRGPNPSSNHPTLQLLEKCKTLDTL----KQVHAHMITTGLIFHTYPLSRILLISSTIVF 56
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE--ALILFQKT-QQEGLLSDSVTIVSV 217
T +F+ + + + +I++ KP A L+ + L + T S+
Sbjct: 57 TH-ALSIFNHIPNPTIFLYNTLISSLANI-KPHTHIAFSLYSRVLTHTTLKPNGFTFPSL 114
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLC---IQNSIVAMYARCGNVEKARLVFDMMEK 274
A G + +A+H + + FLE C +Q +++ YA+CG V R +F+ + K
Sbjct: 115 FKACGSQPWLRHGRALHTHVL--KFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISK 172
Query: 275 RDLISWNSMLTGYIQNGQAS--------EALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
DL SWNS+L+ Y+ N A E L LF EMQ S K N VT + L+SAC LG
Sbjct: 173 PDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELG 232
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ G H Y++ N+K++ + A++DMY+KCG LD A +F+ + R+ +N +
Sbjct: 233 ALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQL--PHRDTLCYNAM 290
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-S 445
I G+ +HG+G +AL+ F +M EG+ PD +T + +CSH GL++EG F M ++
Sbjct: 291 IGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYG 350
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAA 500
V+P+++HY C+VD+LGRAG L EA + + MP+ PN +W +LL A R+HG E+
Sbjct: 351 VEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVL 410
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
+L QLEPE +G +VL+SN+YA+ N+W +V ++R+ MK+ G+ K S++E G + F
Sbjct: 411 KHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEF 470
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
D+ +P KE+Y K+E M+ + G+ P L D+E+E++E L+YHSE+LA+AF
Sbjct: 471 LMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAF 530
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ A +++ KNLRVC DCH++ + IS IY R+IIVRD NRFHHF+ G CSC+DYW
Sbjct: 531 ALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 231/462 (50%), Gaps = 35/462 (7%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
MR PS+ QLL+ C L +L+Q+H+ + T+GLI L ++I T
Sbjct: 1 MRGPNPSSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVF--TH 58
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYAN-NGHCVETLELYS-TMRRSGISSNSYTFPFVLK 118
A S+FN I N FL+NT+I + AN H LYS + + + N +TFP + K
Sbjct: 59 ALSIFNHIPNPT--IFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFK 116
Query: 119 ACASNSLILEGKVVHGDIIRTGFLS---DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
AC S + G+ +H +++ FL D +VQAAL++ YAKCG+ +F+++S D
Sbjct: 117 ACGSQPWLRHGRALHTHVLK--FLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPD 174
Query: 176 LVSWTVMITAY--------EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
L SW +++AY E E L LF + Q+ + ++ VT+V++ SA +LG +
Sbjct: 175 LASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGAL 234
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ H Y + + + + +++ MY++CG ++ A +FD + RD + +N+M+ G+
Sbjct: 235 SQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGF 294
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK--- 344
+G +AL LF +M P+ VT ++ + +C+++G + G + +MK
Sbjct: 295 AIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVE-----EGCDVFESMKEVY 349
Query: 345 -IDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRK 398
++ L + ++D+ + G L AE ++ P + N W L+ +HG+ G
Sbjct: 350 GVEPKLEHYGCLVDLLGRAGRLREAEERVLNM-PMKPNAVIWRSLLGAARVHGNLEIGEV 408
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
L+ Q LE +++ +++ ++ + + RK D
Sbjct: 409 VLKHLIQ-LEPETSGNYVLLSNMYASINRWDDVKRVRKLMKD 449
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/688 (33%), Positives = 371/688 (53%), Gaps = 29/688 (4%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++ +SLR Q+H++L G + + L +I Y G+ + A +F+ +
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTM-LNNNLIDMYAKCGKLHMAGEVFDGMPER 68
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W ++ + ++G E L L+ MR SG S N +T LKAC + G
Sbjct: 69 NVVS--WTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRA--GVQ 124
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG +RTGF V +LV MY+K T D +VFD + R+L +W MI+ Y A +
Sbjct: 125 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 184
Query: 192 PEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF--LEDLCI 248
++L++F++ Q+ D T S+ A LG + VH + +
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAIL 244
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+++ +Y +C + A VFD +E+R+ I W +++ G+ Q GQ EA+ LF +S
Sbjct: 245 AGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGV 304
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+ + +V+ + G++ H Y + +D ++ N+++DMY KCG A
Sbjct: 305 RADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGR 364
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
F ++ P+ RNV SW +I G G HGHGR+A++ F +M EGV+ D + + ++LSACSH+
Sbjct: 365 RFREM-PA-RNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHS 422
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+DE R+ F+ + + ++P+ +HYACMVD+LGRAG L EA ++I MP+ P VW
Sbjct: 423 GLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQT 482
Query: 488 LLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACR+H ++A + L ++ ++ +V++SNI A + +WRE +R M+ KGL
Sbjct: 483 LLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGL 542
Query: 543 KKPAAFSVIEYGKDIQGFH-TADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDV 600
+K S E K++ F+ D +P ++ + + + ++ GY D CALHDV
Sbjct: 543 RKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDV 602
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEA--------VVQVTKNLRVCNDCHSAFRFISY 652
++E R L HSE+LAV ++ VV+V KNLRVC DCH + +S
Sbjct: 603 DEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSA 662
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ RR ++VRDANRFH F+ G CSC DYW
Sbjct: 663 VVRRVVVVRDANRFHRFQNGACSCRDYW 690
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/614 (34%), Positives = 343/614 (55%), Gaps = 16/614 (2%)
Query: 77 LWNTMIRAYANNGHCVETL----ELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
LW+ R +++ L +L++ SG +++ +T ++ A A + + +
Sbjct: 39 LWSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAAREL 98
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
I R +S + L Y K G K+FDEM R++ +W M+
Sbjct: 99 FERIPRRNVMSWNI----LFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFD 154
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EE+L F ++EG+ D + SV L DV+ + VH Y + + D+C+ +S+
Sbjct: 155 EESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSL 214
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
MY RCG +++ V M+ ++S N+++ G QNG + AL F M++ +
Sbjct: 215 AHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADV 274
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT + +S+C+ L + G++ HG ++ + + + ++ MY++CG L +E +F
Sbjct: 275 VTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFG 334
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
S+ + S +I+ YG HGHG+KA+E F QM+ G +P +TF ++L ACSH+GL +
Sbjct: 335 YCGSDTFLLS--AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKE 392
Query: 433 EGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG CF MTK ++P VKHY C+VD+LGR+GCL EA +I MPL P+ +W LL A
Sbjct: 393 EGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C+ E A + +L+P + +VL+SNI A S +W +V ++R+ M++ ++K
Sbjct: 453 CKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEP 512
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S +E I F T D +P KE+ + +E M +I+ GY PD+S LHD+EDE++E
Sbjct: 513 GVSWVELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKE 572
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
L++HSEKLA+AF ++L ++V KNLRVC+DCH A + +S + R+I+VRD +RF
Sbjct: 573 VSLSHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRF 632
Query: 667 HHFEGGTCSCNDYW 680
HHF+ G CSC DYW
Sbjct: 633 HHFKDGRCSCRDYW 646
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 175/408 (42%), Gaps = 32/408 (7%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI-- 68
+ L ++C L LRQ+H+ TSG +++ Y G+ AR LF I
Sbjct: 46 LFSHLFRACRALRPLRQLHAFAATSGAATDRF-TANHLMLAYADLGDLTAARELFERIPR 104
Query: 69 HNDKSYSFL---------------------------WNTMIRAYANNGHCVETLELYSTM 101
N S++ L WN M+ N G E+L + M
Sbjct: 105 RNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDM 164
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT 161
RR G+ + + V + CA ++ G+ VH ++R+G D V ++L MY +CG
Sbjct: 165 RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCL 224
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
+G V + +VS +I Q E AL F + G+ +D VT VS S+
Sbjct: 225 QEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC 284
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L + + Q +HG + + + + +V MY+RCG + + VF D +
Sbjct: 285 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLS 344
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIIN 340
+M++ Y +G +A+ LF +M N +P+ VT L L+ AC++ G ++ G F
Sbjct: 345 AMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKT 404
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
M+ V+D+ + G LD AE + + P + W L++
Sbjct: 405 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSM-PLTPDGVIWKTLLS 451
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG-EPNTARSLFNSIHND 71
+ SC+ LA+L +QIH + +G +++ + + ++ Y+ G ++ R F +D
Sbjct: 281 ISSCSDLAALAQGQQIHGQVMKAG-VDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSD 339
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+FL + MI AY +GH + +EL+ M G + TF +L AC+ + L EG
Sbjct: 340 ---TFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMD 396
Query: 132 VHGDIIRTGFLSDSYVQ-AALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA---- 185
+ +T + S +VD+ + G D+ + M + D V W +++A
Sbjct: 397 CFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQ 456
Query: 186 --YEQAEKPEEALI 197
++ AE+ + +I
Sbjct: 457 KNFDMAERIAKRVI 470
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 310/536 (57%), Gaps = 8/536 (1%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
L+ Y K G + K+FDEM R++ +W M+ + EE+L F ++EG+ D
Sbjct: 114 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 173
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
+ S+ L DV+ + VH Y + + D+C+ +S+ MY RCG +
Sbjct: 174 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 233
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
+ +++S N+ ++G QNG A AL F M+ + + N VT + V++C+ L +
Sbjct: 234 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 293
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G++ H I + + + +++ MY++CG L +E + + S ++ + +I+ Y
Sbjct: 294 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVC--LEYSGTDLVLCSAMISAY 351
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPE 449
G HGHG+KA+ F QM+ G +P+ +TF ++L ACSH+GL DEG CF MTK ++P
Sbjct: 352 GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPS 411
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLF 504
VKHY C+VD+LGR+GCL EA D+I MP+ P+ +W LL AC+ E A +
Sbjct: 412 VKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVI 471
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
+L+P + +VL+SNI A S++W +V K+RE M+ + ++K S +E I F T D
Sbjct: 472 ELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGD 531
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
+ +E+ + +E M I+ GY PD+S HD+EDE++E L +HSEKLA+AF ++
Sbjct: 532 ESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLS 591
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
L ++V KNLRVC+DCH A + +S + R+I+VRD +RFHHF+ G CSC DYW
Sbjct: 592 LPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 183/412 (44%), Gaps = 32/412 (7%)
Query: 7 STEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
S G + + ++C L LRQ+H+ TSG +++ Y G+ TAR LF
Sbjct: 43 SEPGLFSHIFRACQALPLLRQLHAFAATSGAAADRF-TANHLLLAYADLGDFPTARGLFE 101
Query: 67 SI--HNDKSYSFL---------------------------WNTMIRAYANNGHCVETLEL 97
I N S++ L WN M+ N+G E+L
Sbjct: 102 RIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGF 161
Query: 98 YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK 157
+ MRR G+ + Y + + CA ++ G+ VH ++R+G D V ++L MY +
Sbjct: 162 FFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMR 221
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
CG DG + ++VS I+ Q E AL F + G+ +++VT VS
Sbjct: 222 CGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSA 281
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
++ L + + Q +H AI + + + S+V MY+RCG + + V DL
Sbjct: 282 VTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDL 341
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHG 336
+ ++M++ Y +G +A+ LF +M + +PN VT L L+ AC++ G + G F
Sbjct: 342 VLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFEL 401
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
++ ++D+ + G L+ AE++ + P + + W L++
Sbjct: 402 MTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSM-PVQPDGVIWKTLLS 452
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
L R+ H + S D N ++ YA GD TA +F I +RNV SWN+LI G
Sbjct: 60 LLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERI--PKRNVMSWNILIGG 117
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
Y +G A + F +M V T+ ++++ +++GL +E F M + ++P+
Sbjct: 118 YVKNGDLETARKLFDEMPARNVA----TWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 173
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/646 (35%), Positives = 350/646 (54%), Gaps = 39/646 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I + G + AR +F+++ + S W +M+R Y NG E L+ M +
Sbjct: 92 LISGHIKNGMLSEARRVFDTMPDRNVVS--WTSMVRGYVRNGDVAEAERLFWHMPHKNVV 149
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF----LSDSYVQAALVDMYAKCGQTDD 163
S + L+ EG+V D R F D ++ Y + G+ D+
Sbjct: 150 SWTVML---------GGLLQEGRV---DDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDE 197
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA--V 221
+FDEM R++V+WT M++ Y + K + A LF+ + +S + ++ + +
Sbjct: 198 ARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRM 257
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
+ + A V +CN ++ + G V+KAR VF M++RD +W+
Sbjct: 258 REASSLFDAMPVKPVVVCN----------EMIMGFGLNGEVDKARRVFKGMKERDNGTWS 307
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ Y + G EAL LF MQ N + + ++S C L S G++ H ++ S
Sbjct: 308 AMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRS 367
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
D + + ++ MY KCG+L A+ +FN ++V WN +I GY HG G +AL
Sbjct: 368 EFDQDLYVASVLITMYVKCGNLVRAKQVFNRF--PLKDVVMWNSMITGYSQHGLGEEALN 425
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDML 460
F M GV PD +TF +LSACS++G + EG + F M K V+P ++HYAC+VD+L
Sbjct: 426 VFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLL 485
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GRA + EA ++++MP+ P+ VWGALL ACR H E+A L QLEP++ G +V
Sbjct: 486 GRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYV 545
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD-RVNPYWKEVY 574
L+SN+YA +WR+V LRE +K + + K S IE K + F D + +P +
Sbjct: 546 LLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIM 605
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
K +E + ++ AGY PD S LHDV++E++ H L YHSEKLAVA+G++ + ++V
Sbjct: 606 KMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVM 665
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCHSA + I+ + R+II+RDANRFHHF+ G CSC DYW
Sbjct: 666 KNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 215/491 (43%), Gaps = 80/491 (16%)
Query: 155 YAKCGQTDDGCKVFDEMSV--RDLVSWTVMITAYEQAEKPEEALILFQKTQQE------- 205
YA+ GQ D KVFDE + R + SW M+ AY +A +P EAL+LF+K Q
Sbjct: 32 YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNG 91
Query: 206 --------GLLSDS------------VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
G+LS++ V+ S+ + GDV +A+ + + +
Sbjct: 92 LISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSW 151
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ ++ + G V+ AR +FDMM ++D+++ +M+ GY + G+ EA LFDEM
Sbjct: 152 TVMLGGLL----QEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMP- 206
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFH----------------GYIINSNMKIDATL 349
K N VT +VS G + RK GY + M+ ++L
Sbjct: 207 ---KRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSL 263
Query: 350 RNAV----------MDM-YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+A+ M M + G++D A +F + ER+ +W+ +I Y G+ +
Sbjct: 264 FDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGM--KERDNGTWSAMIKVYERKGYELE 321
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
AL F +M EG+ + + S+LS C +D G++ A + + ++ + ++
Sbjct: 322 ALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLIT 381
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--GEIAANYLFQL----EPEHTG 512
M + G L A + + PL + +W +++ H GE A N + P
Sbjct: 382 MYVKCGNLVRAKQVFNRFPL-KDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDV 440
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
F+ + + + S K +E +L E MK K +P + Y + AD+VN E
Sbjct: 441 TFIGVLSACSYSGKVKEGLELFETMKCKYQVEPG---IEHYACLVDLLGRADQVN----E 493
Query: 573 VYKKVESMAVE 583
K VE M +E
Sbjct: 494 AMKLVEKMPME 504
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 310/536 (57%), Gaps = 8/536 (1%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
L+ Y K G + K+FDEM R++ +W M+ + EE+L F ++EG+ D
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
+ S+ L DV+ + VH Y + + D+C+ +S+ MY RCG +
Sbjct: 66 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
+ +++S N+ ++G QNG A AL F M+ + + N VT + V++C+ L +
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G++ H I + + + +++ MY++CG L +E + + S ++ + +I+ Y
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVC--LEYSGTDLVLCSAMISAY 243
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPE 449
G HGHG+KA+ F QM+ G +P+ +TF ++L ACSH+GL DEG CF MTK ++P
Sbjct: 244 GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPS 303
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLF 504
VKHY C+VD+LGR+GCL EA D+I MP+ P+ +W LL AC+ E A +
Sbjct: 304 VKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVI 363
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
+L+P + +VL+SNI A S++W +V K+RE M+ + ++K S +E I F T D
Sbjct: 364 ELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGD 423
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
+ +E+ + +E M I+ GY PD+S HD+EDE++E L +HSEKLA+AF ++
Sbjct: 424 ESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLS 483
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
L ++V KNLRVC+DCH A + +S + R+I+VRD +RFHHF+ G CSC DYW
Sbjct: 484 LPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 162/342 (47%), Gaps = 4/342 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y G+ TAR LF+ + + WN M+ N+G E+L + MRR G+
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVAT--WNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ Y + + CA ++ G+ VH ++R+G D V ++L MY +CG DG
Sbjct: 64 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
+ ++VS I+ Q E AL F + G+ +++VT VS ++ L +
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ Q +H AI + + + S+V MY+RCG + + V DL+ ++M++ Y
Sbjct: 184 AQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAY 243
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKID 346
+G +A+ LF +M + +PN VT L L+ AC++ G + G F ++
Sbjct: 244 GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPS 303
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
++D+ + G L+ AE++ + P + + W L++
Sbjct: 304 VKHYTCIVDLLGRSGCLNEAEDLILSM-PVQPDGVIWKTLLS 344
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N ++ Y + G++E AR +FD M R++ +WN+M+ G +G E+L F M+ +
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P+ L C L GR+ H Y++ S + D + +++ MY +CG L E
Sbjct: 64 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
+ PS N+ S N I+G +G ALEFF M GV+ + +TF S +++CS
Sbjct: 124 LRAL-PS-LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLA 181
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCL 466
+ +G++ A K V V +V M R GCL
Sbjct: 182 ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCL 218
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/606 (35%), Positives = 347/606 (57%), Gaps = 26/606 (4%)
Query: 92 VETLELYSTMRRSGISSNSYTFPFV-LKACASNSLILEGKVVHGDIIRTG-----FLS-- 143
+ T+ + + +RR ++ F LK + + +L G +IR F S
Sbjct: 14 LSTVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGLIRLADARRLFDSIP 73
Query: 144 --DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D+ L+ + CG D +VF M V+D+ SW M++ + EEA +F+
Sbjct: 74 HPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRI 133
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+S + + ++A + GD+ A+ + A D + ++V+ Y GN
Sbjct: 134 MPVRNAVSWNAMVAALACS----GDMGAAEDLFRNAPEKT---DAILWTAMVSGYMDTGN 186
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVS 320
V+KA F M R+L+SWN+++ GY++N +A +AL +F M ++S +PN T ++
Sbjct: 187 VQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLL 246
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
C+ L + GR+ H + + + + T+ +++ MY KCGDL+ A +F+++ S +++
Sbjct: 247 GCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEM--STKDI 304
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
+WN +I+GY HG G +A++ F +M +EGV PD IT ++L+AC H GL D G +CF
Sbjct: 305 VAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFET 364
Query: 441 MTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH---- 495
M + ++P++ HY+CMVD+L RAG L A +MI MP P+ S +G LL ACR++
Sbjct: 365 MQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLE 424
Query: 496 -GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
E AA L + +P++ G +V ++NIYA +NKW +V ++R MK+ + K +S +E
Sbjct: 425 FAEFAARKLIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIK 484
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
F + DR++P ++ K++ + + +K GY+PDL ALHDVED + ML HSE
Sbjct: 485 GVRHEFRSNDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSE 544
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+AFG+++ +P +++ KNLR+C DCH+A + IS I R+II+RD RFHHF GG C
Sbjct: 545 KLAIAFGLISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHC 604
Query: 675 SCNDYW 680
SC DYW
Sbjct: 605 SCGDYW 610
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 177/352 (50%), Gaps = 22/352 (6%)
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFP 114
G+ + AR +F+++ S WNTM+ + NG E ++ M R+ +S N+
Sbjct: 91 GDIDGARRVFSTMPVKDVTS--WNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAA 148
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
AC+ + E D+ R +D+ + A+V Y G + F M V
Sbjct: 149 L---ACSGDMGAAE------DLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPV 199
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQA 232
R+LVSW ++ Y + + ++AL +F+ ++ ++ ++ T+ SV L + +
Sbjct: 200 RNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQ 259
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
VH + + ++ + S+++MY +CG++ A VFD M +D+++WN+M++GY Q+G
Sbjct: 260 VHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGG 319
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR-- 350
+A+ LF++M++ P+ +T L +++AC + G G + + KI+ +
Sbjct: 320 GMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCF-ETMQEAYKIEPQIDHY 378
Query: 351 NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ ++D+ + G L+ A NM + + P E + S++ L+ ++ K LEF
Sbjct: 379 SCMVDLLCRAGLLERAVNMIHSM-PFEPHPSAYGTLLTACRVY----KNLEF 425
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L C+ L++L RQ+H L ++ + +G ++ Y G+ N A +F+ +
Sbjct: 244 VLLGCSNLSALGFGRQVHQWCMKLPL-SRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTK 302
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ WN MI YA +G ++ ++L+ M+ G+ + T VL AC L
Sbjct: 303 DIVA--WNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGL 354
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/571 (36%), Positives = 336/571 (58%), Gaps = 21/571 (3%)
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD---GCKVFDEMSVRDLVSWTVMI 183
L + +H ++RT + +S V A D C+VF + L MI
Sbjct: 25 LHLRQIHAVLLRTSLIRNSDVFHHFFSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMI 84
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG---QLGDVLKAQAVHGYAICN 240
A+ ++ P E LF+ ++ +S +S + A+ + GD+L +HG +
Sbjct: 85 RAFSLSQTPCEGFRLFRALRRN--ISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSD 142
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
FL D + +++ +Y+ C N A VFD + +RD +SWN +++ Y++N + + L+LF
Sbjct: 143 GFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLF 202
Query: 301 DEMQNS--DC-KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
D+M+N C KP+ VT L+ + AC LG+ G++ H +I + + L N ++ MY
Sbjct: 203 DKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMY 262
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHIT 417
++CG +D A +FN + ERNV SW +I+G M+G G++A+E F++ML+ G+ P+ T
Sbjct: 263 SRCGSMDKAYEVFNRMR--ERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQT 320
Query: 418 FTSILSACSHAGLIDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
T +LSACSH+GL+DEG F M + +KP + HY C+VD+LGRA L +A+ +IK
Sbjct: 321 LTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKS 380
Query: 476 MPLPPNDSVWGALLLACRIHGEIAAN-----YLFQLEPEHTGYFVLMSNIYAASNKWREV 530
M + P+ ++W LL ACR+HG + +L + + E G +VL+ N Y++ KW +V
Sbjct: 381 MEMKPDSTIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKV 440
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
+LR MK K ++ S IE + F D +P +E+YK + + ++K+AGY+
Sbjct: 441 TELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYV 500
Query: 591 PDLSCALHDVE-DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRF 649
+++ LH+++ +E++ + L YHSEKLA+AFGI+ PE ++VTKNLR C DCH+ +F
Sbjct: 501 AEITSELHNLDSEEEKGYALRYHSEKLAIAFGILVTPPETTIRVTKNLRTCVDCHNFAKF 560
Query: 650 ISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+S +Y R +IVRD +RFHHF+GG+CSCND+W
Sbjct: 561 VSDVYDRVVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 198/393 (50%), Gaps = 13/393 (3%)
Query: 25 LRQIHSSLTTSGLINQA---LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
LRQIH+ L + LI + H +++ + + R ++ S+ NTM
Sbjct: 27 LRQIHAVLLRTSLIRNSDVFHHFFSRLALSLIPRDINYSCRVFSQRLNPTLSHC---NTM 83
Query: 82 IRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
IRA++ + E L+ +RR+ +N + F LK C + +L G +HG I G
Sbjct: 84 IRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDG 143
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
FLSDS + L+D+Y+ C + D CKVFDE+ RD VSW V+I+ Y + ++ + L+LF
Sbjct: 144 FLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLVLFD 203
Query: 201 KTQQE---GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
K + + + D+VT + A LG + + VH + N L + N++V+MY+
Sbjct: 204 KMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYS 263
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
RCG+++KA VF+ M +R+++SW +M++G NG EA+ F+EM P T
Sbjct: 264 RCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTG 323
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHP 375
L+SAC++ G G F + + KI L + ++D+ + LD A ++ +
Sbjct: 324 LLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKSME- 382
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ + + W L+ +HG+ + ++E
Sbjct: 383 MKPDSTIWRTLLGACRVHGNVELGERVIAHLIE 415
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 332/586 (56%), Gaps = 14/586 (2%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
+S ++ + L+ C S + I EGK +H I+ GF S Y+ LV+MY KCG
Sbjct: 53 VSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAK 112
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
VF R++ SWT+M+ A+ +AL L + EG+ +S+T + + AV L
Sbjct: 113 SVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALS 172
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + +A+H C FL D+ + N ++ MYA+C ++ A VF+ + R +I+W +++
Sbjct: 173 WLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVA 232
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
Y NG +AL +F M +P VT + +V C + +GR+ HG +I++ +
Sbjct: 233 AYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEA 291
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ + NA+++MY KC D A +F+ + +++ +WN +IA YG +G+G +ALE + +
Sbjct: 292 NVCVGNALINMYGKCASPDEARKVFDAMQ--RKDIITWNSMIAVYGQNGYGFQALEIYKR 349
Query: 406 MLEE-----GVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDM 459
M E G+ D ITF +L ACSHAGL+ + K ++ M KP C++D+
Sbjct: 350 MQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDL 409
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYF 514
LGRAG L EA + I MP P+ ++W LL AC H ++ AA+ + L P +G +
Sbjct: 410 LGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSY 469
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
V +SN+YA + +W ++ ++R+ M +G+ K A S IE G + F D +P +E+Y
Sbjct: 470 VALSNLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIY 529
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
+++ + I+ GY+PD+ LH+ E +E M +HSE+LA+AFG+++ +++
Sbjct: 530 EELRRIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIM 589
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCHSA + IS RKIIVRDANRFH F G+CSC DYW
Sbjct: 590 KNLRVCPDCHSATKIISKFSGRKIIVRDANRFHEFRNGSCSCEDYW 635
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 205/407 (50%), Gaps = 15/407 (3%)
Query: 2 RRLGPSTE--GFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
R + PS E +Y + S +A ++IH + G + +L ++ Y G
Sbjct: 51 RSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGF-KSSRYLCNLLVEMYGKCGSLQ 109
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
A+S+F+ +S W M+ A+A+NGH ++ L L M GIS NS TF +L A
Sbjct: 110 AAKSVFHITPRRNVFS--WTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGA 167
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
A+ S + G+ +H I GFL+D +V L++MYAKC D C VF+ ++ R +++W
Sbjct: 168 VAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAW 227
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
T ++ AY +AL +F +G+ VT V+V + + VHG +
Sbjct: 228 TALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG--VI 285
Query: 240 NAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
+A E ++C+ N+++ MY +C + ++AR VFD M+++D+I+WNSM+ Y QNG +AL
Sbjct: 286 DARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALE 345
Query: 299 LFDEMQNS-----DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNA 352
++ MQ S + +T + ++ AC++ G + K + +I K +
Sbjct: 346 IYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGC 405
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
++D+ + G LD AE N + P + + W +L+ H +A
Sbjct: 406 LIDLLGRAGWLDEAEEFINSM-PYHPDHTIWTILLGACITHADVERA 451
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/554 (36%), Positives = 320/554 (57%), Gaps = 18/554 (3%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ + N A S+F+ ++ + F +N +I + NG E E Y MR G+ + +
Sbjct: 2 YSKCNQMNFALSIFSDPTHEINV-FAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
TFP +KAC +LE K +HG + + G D ++ +ALV+ Y K G + F+E+
Sbjct: 61 TFPCAIKACLD---VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+RD+V W M+ Y Q + E L F++ E ++ T+ + S +GD+ +
Sbjct: 118 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGR 177
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+HG+A+ + + + NS++ MY +C +E A +F+MM ++D+ SWNS+ + + Q G
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCG 237
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT--- 348
L L D M + +P+ VT ++ AC++L + GR+ HGY+I S + D
Sbjct: 238 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 297
Query: 349 ---LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
L+NAV+DMYAKCG + A +F + ++V+SWN++I GYGMHG+G +ALE FS+
Sbjct: 298 DVLLKNAVIDMYAKCGSMRDAHLVFERM--XNKDVASWNIMIMGYGMHGYGNEALEMFSR 355
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAG 464
M E +KPD +TF +LSACSHAG + +GR A M +K V P ++HY C++DMLGRAG
Sbjct: 356 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAG 415
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA+++ MP+ N VW ALL ACR+H E+AA +F+LEPEH G +VLMSN
Sbjct: 416 QLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSN 475
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
+Y A ++ EV ++R M+ + ++K S IE + F +ADR +P +Y + S
Sbjct: 476 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNS 535
Query: 580 MAVEIKMAGYMPDL 593
+ + GY+PD+
Sbjct: 536 LTARLCEHGYVPDV 549
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 73/135 (54%), Gaps = 7/135 (5%)
Query: 356 MYAKCGDLDTAENMFNDIHPS-ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
MY+KC ++ A ++F+D P+ E NV ++N +I+G+ +G + EF+ +M EGV PD
Sbjct: 1 MYSKCNQMNFALSIFSD--PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPD 58
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
TF + AC + E +K + K ++ +V + +V+ + G + A +
Sbjct: 59 KFTFPCAIKACLD---VLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE 115
Query: 475 QMPLPPNDSVWGALL 489
++P+ + +W A++
Sbjct: 116 ELPI-RDVVLWNAMV 129
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/655 (34%), Positives = 353/655 (53%), Gaps = 24/655 (3%)
Query: 36 GLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETL 95
GL + +G+ +I G+ +AR +F+ + + +W +I Y E +
Sbjct: 182 GLWGTDVAVGSALIDMLARNGDLASARKVFDGL--IEKTVVVWTLLISRYVQGECAEEAV 239
Query: 96 ELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
EL+ G + YT ++ AC + G +H +R G SD+ V LVDMY
Sbjct: 240 ELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMY 299
Query: 156 AKC--GQTDD-GCKVFDEMSVRDLVSWTVMITAYEQAEKPE-EALILFQKTQQEGLLSDS 211
AK GQ D KVF+ M D++SWT +I+ Y Q+ E + + LF + E + +
Sbjct: 300 AKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNH 359
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
+T S+ + + D + VH + I + + N++V+MYA G +E+AR VF+
Sbjct: 360 ITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQ 419
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
+ +R +I I G+ L + D + T L+SA +G G
Sbjct: 420 LYERSMIPC-------ITEGRD---FPLDHRIVRMDVGISSSTFASLISAAASVGMLTKG 469
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ H + + D + N+++ MY++CG L+ A FN++ +RNV SW +I+G
Sbjct: 470 QQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNEL--KDRNVISWTSMISGLA 527
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEV 450
HG+ +AL F M+ GVKP+ +T+ ++LSACSH GL+ EG++ F M + + P +
Sbjct: 528 KHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRM 587
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
+HYACMVD+L R+G + EA + I +MPL + VW LL ACR H GEI A + +
Sbjct: 588 EHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVE 647
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
LEP +VL+SN+YA + W EV ++R M++ L K S +E F D
Sbjct: 648 LEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDT 707
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P +++Y K++++ +IK GY+PD S LHD+ DE +E L HSEK+AVAFG++
Sbjct: 708 SHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITT 767
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +++ KNLRVC DCHSA +++S RR+II+RD+NRFH + G CSC +YW
Sbjct: 768 SAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 183/356 (51%), Gaps = 10/356 (2%)
Query: 129 GKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAY 186
G+ +H ++R L D+ V +L+ +Y++CG VFD M +RD+VSWT M +
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV--GQLGDVLKAQAVHGYAICNAFLE 244
+ +L+L + + GLL ++ T+ + A A +L ++ + +
Sbjct: 127 ARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGT 186
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D+ + ++++ M AR G++ AR VFD + ++ ++ W +++ Y+Q A EA+ LF +
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG--- 361
+P+ T ++SACT LGS +LG + H + + DA + ++DMYAK
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG-HGRKALEFFSQMLEEGVKPDHITFTS 420
+D A +F + + +V SW LI+GY G K + F +ML E +KP+HIT++S
Sbjct: 307 AMDYANKVFERM--PKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSS 364
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
IL +C+ D GR+ A + K + +V M +GC+ EA + Q+
Sbjct: 365 ILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQL 420
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 150/317 (47%), Gaps = 20/317 (6%)
Query: 225 GDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEK-RDLISWNS 282
GD+ +A+H + L+ D + NS++ +Y+RCG V AR VFD M RD++SW +
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M + +NG +LLL EM S PN T AC + +
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHAC-FPHELYCLVGGVVLGLVHK 180
Query: 343 MKI---DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
M + D + +A++DM A+ GDL +A +F+ + E+ V W +LI+ Y +A
Sbjct: 181 MGLWGTDVAVGSALIDMLARNGDLASARKVFDGL--IEKTVVVWTLLISRYVQGECAEEA 238
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDM 459
+E F LE+G +PD T +S++SAC+ G + G + + ++ + + +VDM
Sbjct: 239 VELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDM 298
Query: 460 LGRAGCLYEAFDMIKQM--PLPPNDSVWGALLLACRIHGEIAANYLFQL---------EP 508
++ + +A D ++ +P ND + L++ + + N + L +P
Sbjct: 299 YAKSN-IGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKP 357
Query: 509 EHTGYFVLMSNIYAASN 525
H Y ++ + + S+
Sbjct: 358 NHITYSSILKSCASISD 374
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/718 (32%), Positives = 390/718 (54%), Gaps = 57/718 (7%)
Query: 12 YDQLLKSCNFLASLRQIHS--SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIH 69
+ Q LK+C LR S +L + + +L ++ Y+ + AR +F+ H
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 70 NDKSYSF-----------------------------LWNTMIRAYANNGHCVETLELYST 100
+ +SF +NT+I AYA G +L+
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA--ALVDMYAKC 158
MR + + + +T ++ AC N ++ + +H + TG DSYV AL+ Y+K
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLI--RQLHALSVVTGL--DSYVSVGNALITSYSKN 186
Query: 159 GQTDDGCKVFDEMSV-RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
G + ++F +S RD VSW M+ AY Q + +AL L+ + GL+ D T+ SV
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN-VEKARLVFDMMEKRD 276
+A + D+L H I + + ++ + + ++ +Y++CG + R VFD + D
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306
Query: 277 LISWNSMLTGY-IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
L+ WN+M++GY + + EAL F ++Q +P+ + + ++SAC+ + S GR+ H
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVH 366
Query: 336 GYIINSNMKID-ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
G + ++ + ++ NA++ MY+KCG+L A+ +F+ + E N S+N +IAGY HG
Sbjct: 367 GLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTM--PEHNTVSYNSMIAGYAQHG 424
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHY 453
G ++L F +MLE P +ITF S+L+AC+H G +++G+ F M K ++PE H+
Sbjct: 425 MGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHF 484
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEP 508
+CM+D+LGRAG L EA +I+ +P P W ALL ACRIHG + AAN L QL+P
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDP 544
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
+ +V+++NIY+ + + ++ +R+ M+++G+KK S IE + I F D +P
Sbjct: 545 LNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHP 604
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR------EHMLNYHSEKLAVAFGI 622
K++ + +E M +IK GY P++ A V +DR E L +HSEKLAV+FG+
Sbjct: 605 MIKKIQEYLEEMMRKIKKVGYTPEVRSA--SVGGDDRVWQREEELRLGHHSEKLAVSFGL 662
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
M+ + V KNLR+C DCH+A ++IS + +R+I VRD++RFH F+ G CSC YW
Sbjct: 663 MSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 225/512 (43%), Gaps = 88/512 (17%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
SS ++F LK C ++ + GK +H I++ + +Y+ + +Y+KC +
Sbjct: 4 FSSLLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAAR 63
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+VFD ++ S+ +I+AY + E A LF + Q DSV+ ++ +A + G
Sbjct: 64 RVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ----PDSVSYNTLIAAYARRG 119
Query: 226 DVLKA---------------------------------QAVHGYAICNAFLEDLCIQNSI 252
D A + +H ++ + + N++
Sbjct: 120 DTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNAL 179
Query: 253 VAMYARCGNVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ Y++ G +++AR +F + E RD +SWNSM+ Y+Q+ + S+AL L+ EM +
Sbjct: 180 ITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVD 239
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD--LDTAENM 369
T +++A T + G +FH +I S ++ + + ++D+Y+KCG LD +
Sbjct: 240 IFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD-CRKV 298
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGH-GRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
F++I S ++ WN +I+GY ++ +ALE F Q+ G +PD + ++SACS+
Sbjct: 299 FDEI--SNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNM 356
Query: 429 GLIDEGRKCFADMTKLSVKP-EVKHYACMVDMLGRAGCLYEAFDMIKQMP---------- 477
+GR+ KL + + ++ M + G L +A + MP
Sbjct: 357 SSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSM 416
Query: 478 ------------------------LPPNDSVWGALLLAC----RIH-GEIAANYL---FQ 505
P + + ++L AC R+ G+I N + F
Sbjct: 417 IAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFG 476
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+EPE G+F M ++ + K E +L E +
Sbjct: 477 IEPE-AGHFSCMIDLLGRAGKLSEAERLIETI 507
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/665 (32%), Positives = 361/665 (54%), Gaps = 15/665 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L+ + +H+ L T+ + LH +I Y G AR++F+++ + S N +
Sbjct: 27 LSKGKALHARLITAAHFDVVLH--NNLISFYAKCGRVGLARTVFDAMPFRNAVSA--NLL 82
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
+ YA++G E+L+L +R N Y + A A+ G+ HG ++ GF
Sbjct: 83 MSGYASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGF 139
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
YV A++ MY +C +D KVF+ +S D ++ MI Y + + +L + +
Sbjct: 140 AEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRN 199
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
E D V+ V+V + D + VH A+ ++ + +++V MY +C +
Sbjct: 200 MTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDH 259
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
V A F+++ +++++SW +++T Y QN +AL LF +M+ +PN T + +++
Sbjct: 260 VHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNS 319
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C L + + G ++ + + NA+M+MY+K G ++ A +F I R+V
Sbjct: 320 CAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVF--ISMPLRDVV 377
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
SWN++I GY HG R+ +E F ML V P ++TF +LSAC+ GL+DE M
Sbjct: 378 SWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTM 437
Query: 442 TK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
K + + P +HY CMV +L R G L EA I + + W +LL +C+++
Sbjct: 438 MKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGL 497
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
G A + QLEP G +VL+SN+YA +N+W V K+R+ M+ + ++K S I G
Sbjct: 498 GHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGS 557
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
D+ F + ++V+P ++ KK+E + +IK GY+P+ + LHD++DE +E L YHSEK
Sbjct: 558 DVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEK 617
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+AFG+++ A + + KNLR+C+DCH A + IS + RKI+VRDA RFH EGG CS
Sbjct: 618 LALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICS 677
Query: 676 CNDYW 680
CNDYW
Sbjct: 678 CNDYW 682
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 7/267 (2%)
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
GD+ K +A+H I A D+ + N++++ YA+CG V AR VFD M R+ +S N ++
Sbjct: 25 GDLSKGKALHARLITAAHF-DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
+GY +G+ E+L L ++ D N VSA + S +GR+ HGY + +
Sbjct: 84 SGYASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFA 140
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ NAV+ MY +C ++ A +F + S + ++N +I GY G +L
Sbjct: 141 EQRYVFNAVLYMYCQCAHMEDASKVFESV--SGFDAFAFNSMINGYLDRGQLDGSLGIVR 198
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
M E K D++++ ++L C+ G + A K ++ V + +VDM G+
Sbjct: 199 NMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCD 258
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLA 491
+++A + +P N W A++ A
Sbjct: 259 HVHDANRAFEVLP-EKNVVSWTAVMTA 284
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/607 (36%), Positives = 338/607 (55%), Gaps = 47/607 (7%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT--DDGCKVFDEMSV 173
+L +C + + E K +H ++ G L++ + V A T D K+ + +
Sbjct: 15 LLNSCTT---LKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNN 71
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQK---TQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
L + MI AY ++ P ++ + + L D+ T + QL +
Sbjct: 72 PTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTG 131
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYA-------------------------------RC 259
VHG I + F D +Q +V MYA +C
Sbjct: 132 LCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKC 191
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G+++ AR +FD M +RD ++WN+M+ GY Q G++ EAL +F MQ K N V+ ++++
Sbjct: 192 GDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVL 251
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
SACT+L GR H Y+ +++ TL A++DMYAKCG++D A +F + ERN
Sbjct: 252 SACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGM--KERN 309
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V +W+ I G M+G G ++L+ F+ M EGV+P+ ITF S+L CS GL++EGRK F
Sbjct: 310 VYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFD 369
Query: 440 DMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--- 495
M + + P+++HY MVDM GRAG L EA + I MP+ P+ W ALL ACR++
Sbjct: 370 SMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNK 429
Query: 496 --GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
GEIA + +LE ++ G +VL+SNIYA W V LR+ MK KG+KK SVIE
Sbjct: 430 ELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEV 489
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
++ F D+ +P + E+ K+E ++ ++++GY+ + + L D+E+E++E L+ HS
Sbjct: 490 DGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDALSKHS 549
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EK+A+AFG+++L ++V NLR+C DCH+ + IS I+ R+IIVRD NRFHHF+ G
Sbjct: 550 EKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRFHHFKDGE 609
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 610 CSCKDYW 616
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 201/411 (48%), Gaps = 43/411 (10%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT--ARSLFNSIHNDK 72
LL SC L ++QIH+ L G++N H + + + N A L N HN+
Sbjct: 15 LLNSCTTLKEMKQIHAQLVVKGILNNP-HFHGQFVATIALHNTTNLDYANKLLN--HNNN 71
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSG---ISSNSYTFPFVLKACASNSLILEG 129
F N+MIRAY+ + ++ Y+ + S +S ++YTF F+++ CA + G
Sbjct: 72 PTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTG 131
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYA-------------------------------KC 158
VHG +I+ GF D +VQ LV MYA KC
Sbjct: 132 LCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKC 191
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
G D K+FDEM RD V+W MI Y Q + EAL +F Q EG+ + V++V V
Sbjct: 192 GDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVL 251
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
SA L + + VH Y + + ++V MYA+CGNV++A VF M++R++
Sbjct: 252 SACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVY 311
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+W+S + G NG E+L LF++M+ +PN +T + ++ C+ +G + GRK H
Sbjct: 312 TWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRK-HFDS 370
Query: 339 INSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
+ + I L + ++DMY + G L A N N + P +V +W+ L+
Sbjct: 371 MRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSM-PMRPHVGAWSALL 420
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/563 (36%), Positives = 315/563 (55%), Gaps = 43/563 (7%)
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
YA G+ D +F + WT +I + E+AL + + +G+ ++ T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV------------ 262
S++ +L + +A+H A+ F DL ++ ++ +YAR G+V
Sbjct: 79 ----SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 263 -------------------EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ AR++FD ME+RD + WN M+ GY QNG +EAL+LF M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ KPN VT L ++SAC LG+ + GR H YI N+ ++ + + A++DMY+KCG L
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ A +F+ I +++V +WN +I GY M G ++AL+ F M G+ P +ITF ILS
Sbjct: 255 EDARLVFDKI--DDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312
Query: 424 ACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
AC H+G + EG F M + ++P+++HY CMV++LGRAG + +A++++K M + P+
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 372
Query: 483 SVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+WG LL ACR+HG+IA L ++G ++L+SNIYAA W V +LR M
Sbjct: 373 VLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMM 432
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
K+ G+KK S IE + F +P KE+Y +E + +K GY P L
Sbjct: 433 KDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVL 492
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
HD+ + ++E L HSEKLA+AFG++N P +++ KNLRVC DCH + IS I RK
Sbjct: 493 HDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRK 552
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I+VRD NRFHHF G+CSC DYW
Sbjct: 553 IVVRDRNRFHHFVNGSCSCGDYW 575
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 189/421 (44%), Gaps = 72/421 (17%)
Query: 47 KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI 106
K+ Y + G + + +LF N F W +I +A G + L Y+ M G+
Sbjct: 14 KLQRSYASLGRLDYSVALFGRTQNPSV--FFWTAIIHGHALRGLHEQALNFYAQMLTQGV 71
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYA---------- 156
N++TF +LK C I GK +H ++ GF SD YV+ L+D+YA
Sbjct: 72 EPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127
Query: 157 ---------------------KCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
K G+ D +FD M RD V W VMI Y Q P EA
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 187
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
L+LF++ + + VT++SV SA GQLG + + VH Y N ++ + ++V M
Sbjct: 188 LVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDM 247
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y++CG++E ARLVFD ++ +D+++WNSM+ GY G + EAL LF M P +T
Sbjct: 248 YSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITF 307
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ ++SAC + G G+ I + MK D +
Sbjct: 308 IGILSACGHSGWVT-----EGWDIFNKMK---------------------------DEYG 335
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
E + + ++ G GH +A E M ++PD + + ++L AC G I G
Sbjct: 336 IEPKIEHYGCMVNLLGRAGHVEQAYELVKNM---NIEPDPVLWGTLLGACRLHGKIALGE 392
Query: 436 K 436
K
Sbjct: 393 K 393
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/688 (33%), Positives = 369/688 (53%), Gaps = 29/688 (4%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
LL++ +SLR Q+H++L G + + L +I Y G+ + A +F+ +
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTM-LNNNLIDMYAKCGKLHMAGEVFDGMPER 264
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S W ++ + ++G E L L+ MR SG S N +T LKAC + G
Sbjct: 265 NVVS--WTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTR--AGVQ 320
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG +RTGF V +LV MY+K T D +VFD + R+L +W MI+ Y A +
Sbjct: 321 IHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQ 380
Query: 192 PEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF--LEDLCI 248
++L++F++ Q+ D T S+ A LG + VH + +
Sbjct: 381 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAIL 440
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+++ +Y +C + A VFD +E+R+ I W +++ G+ Q GQ EA+ LF +S
Sbjct: 441 AGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGV 500
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
+ + +V+ + G++ H Y + +D ++ N+++DMY KCG A
Sbjct: 501 RADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGR 560
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
F ++ RNV SW +I G G HGHGR+A++ F +M EGV+ D + + ++LSACSH+
Sbjct: 561 RFREM--PARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHS 618
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+DE R+ F+ + + ++P+ +HYACMVD+LGRAG L EA ++I MP+ P VW
Sbjct: 619 GLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQT 678
Query: 488 LLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACR+H ++A + L ++ ++ +V++SNI A + +WRE +R M+ KGL
Sbjct: 679 LLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGL 738
Query: 543 KKPAAFSVIEYGKDIQGFH-TADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDV 600
+K S E K++ F+ D +P ++ + + + ++ GY D CALHDV
Sbjct: 739 RKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDV 798
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEA--------VVQVTKNLRVCNDCHSAFRFISY 652
++E R L HSE+LAV ++ VV+V KNLRVC DCH + +S
Sbjct: 799 DEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSA 858
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ RR ++VRDANRFH F+ G CSC DYW
Sbjct: 859 VVRRVVVVRDANRFHRFQNGACSCRDYW 886
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/679 (33%), Positives = 367/679 (54%), Gaps = 18/679 (2%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
+ QLL+ C ++ ++ I + + SG A G+K++ G+ + AR +F+ +
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGF--PAEISGSKLVDASLKCGDIDYARQVFDGM 125
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ + WN++I + E +E+Y M + + + YT V KA + SL E
Sbjct: 126 --SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 129 GKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+ HG + G +S+ +V +ALVDMY K G+T + V D + +D+V T +I Y
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q + EA+ FQ E + + T SV + G L D+ + +HG + + F L
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 303
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
Q S++ MY RC V+ + VF +E + +SW S+++G +QNG+ AL+ F +M
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
KPN T + C+ L + GR+ HG + D + ++D+Y KCG D A
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ + SE +V S N +I Y +G GR+AL+ F +M+ G++P+ +T S+L AC++
Sbjct: 424 LVFDTL--SEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN 481
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
+ L++EG + F K + HYACMVD+LGRAG L EA +M+ + P+ +W
Sbjct: 482 SRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRT 540
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL AC++H E + ++EP G +LMSN+YA++ KW V +++ MK+ L
Sbjct: 541 LLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKL 600
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVN-PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
KK A S +E K+ F D + P +++ + +E + + K GY+ D SC D+E
Sbjct: 601 KKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDME 660
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
+ +E L+ HSEKLA+AF + +++ KNLRVC DCHS + +S + +R+II R
Sbjct: 661 ETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICR 719
Query: 662 DANRFHHFEGGTCSCNDYW 680
D+ RFHHF G+CSC DYW
Sbjct: 720 DSKRFHHFRDGSCSCGDYW 738
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/585 (35%), Positives = 332/585 (56%), Gaps = 16/585 (2%)
Query: 107 SSNSYTFPF-VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD-- 163
S+++ T P +L C S + E K + I+T SD V ++ + T
Sbjct: 16 SNSNTTHPLSLLPKCTS---LRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQ 72
Query: 164 -GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+FD++ D+V + M Y + + P A LF + GL D T S+ A
Sbjct: 73 HAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACA 132
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
+ + + +H AI E++ + +++ MY C ++ AR VFD + + ++++N+
Sbjct: 133 SCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNA 192
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+TGY + + +EAL LF E+Q + KP VT L ++S+C LG+ LG+ H Y+ +
Sbjct: 193 MITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG 252
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ A++DMYAKCG LD A +F ++ + R+ +W+ +I Y +HGHG KA+
Sbjct: 253 FNRFVKVDTALIDMYAKCGSLDDAVCVFENM--AVRDTQAWSAMIMAYAIHGHGLKAVSL 310
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLG 461
F +M + G +PD ITF +L ACSH GL++EG + F M K V P +KHY CMVD+LG
Sbjct: 311 FKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLG 370
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVL 516
RAG L EA++ I +P+ P +W LL AC HG + +F+L+ H G +++
Sbjct: 371 RAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYII 430
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
+SN+ A + +W +V +R+ M +G+ K S +E + F + D V+ ++++
Sbjct: 431 LSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQA 490
Query: 577 VESMAVEIKMAGYMPDLSCALH-DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
++ + E+K+ GY+P+ S H D+EDE++E L YHSEKLA+ FG++N P ++V K
Sbjct: 491 LDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVK 550
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLRVC DCHSA + IS I+ R+II+RD RFHHF+ G CSC DYW
Sbjct: 551 NLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 212/426 (49%), Gaps = 23/426 (5%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-------ARSLFNS 67
LL C L L+Q+ + I LH ++ K+ + N A LF+
Sbjct: 26 LLPKCTSLRELKQLQAFA-----IKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQ 80
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I + L+NTM R YA + L++ + SG+ + YTFP +LKACAS +
Sbjct: 81 I--PQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALE 138
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
EG+ +H I+ G + YV L++MY C + D +VFD++ +V++ MIT Y
Sbjct: 139 EGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYA 198
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ +P EAL LF++ Q L VT++SV S+ LG + + +H Y N F +
Sbjct: 199 RGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVK 258
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ +++ MYA+CG+++ A VF+ M RD +W++M+ Y +G +A+ LF EM+ +
Sbjct: 259 VDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAG 318
Query: 308 CKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+P+ +T L L+ AC++ G + G + F+G + ++D+ + G L+ A
Sbjct: 319 TEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEA 378
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFTSILS 423
+ P W L++ G HG+ G++ +E + L++ D+I +++
Sbjct: 379 YEFIVGL-PIRPTPILWRTLLSACGSHGNVELGKRVIEQIFE-LDDSHGGDYIILSNL-- 434
Query: 424 ACSHAG 429
C+ AG
Sbjct: 435 -CARAG 439
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/533 (37%), Positives = 310/533 (58%), Gaps = 47/533 (8%)
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MYAK G+ D FDE +RD+ VM+ AY + EA +F
Sbjct: 1 MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMP---------- 50
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
+ DL N+++ YA G V AR +FD E
Sbjct: 51 -----------------------------MRDLVSWNTMIHGYAMRGEVGLAREIFDGTE 81
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
RD SW+SM++ Y ++ ++ EAL L+ EM + P+ +T + +VSAC+ LG+ +G +
Sbjct: 82 DRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAE 141
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
H ++ ++ +++D L A++DMYAKCGD+++A+ +F+ + E++V +W+ +I G H
Sbjct: 142 VHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM--PEKDVQTWSSMIIGLANH 199
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKH 452
G G ++L FS+M+ EG+KP+ +TF +L AC+H GL+ EG+K F M ++ ++P V+H
Sbjct: 200 GLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEH 259
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLE 507
Y CMVD+LGR+G + EA +I+ M P+ +W ALL ACRIH E A L L+
Sbjct: 260 YGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLD 319
Query: 508 PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN 567
P G++VL+SNIYA +N W V ++R+ ++ +++ S IE+ + I F + DR++
Sbjct: 320 PLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLH 379
Query: 568 PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTP 627
P KE+Y+ +E M +K AGY P L D++++ +E L HSEKLA+AF ++
Sbjct: 380 PRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERSLAEHSEKLAIAFALLTTPA 439
Query: 628 EAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +++TKNLR C DCHSA + IS +Y RK+IVRD NRFHHF G CSC DYW
Sbjct: 440 RSTIRITKNLRACEDCHSAMKLISLVYDRKLIVRDRNRFHHFSEGQCSCKDYW 492
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 113/245 (46%), Gaps = 16/245 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y GE AR +F+ + ++S W++MI AYA + E LEL+ M + I
Sbjct: 60 MIHGYAMRGEVGLAREIFDGTEDRDAFS--WSSMISAYAKSRRSKEALELWREMHAASII 117
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ T V+ AC+ + G VH + D + AL+DMYAKCG + +V
Sbjct: 118 PDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRV 177
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
FD M +D+ +W+ MI E+L LF K EG+ + VT V V A +G V
Sbjct: 178 FDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLV 237
Query: 228 LKAQA-------VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR-LVFDMMEKRDLIS 279
+ + VHG +V + R G+VE+AR L+ M + D I
Sbjct: 238 SEGKKYFRSMNEVHGIEPTVEHY------GCMVDLLGRSGHVEEARQLIRSMTFEPDTII 291
Query: 280 WNSML 284
W ++L
Sbjct: 292 WRALL 296
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 330/587 (56%), Gaps = 41/587 (6%)
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H +I+ G A LV YAK D +FDE RDL ++ ++ A +E P
Sbjct: 26 HARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVSHSESP 85
Query: 193 EEALILFQKT-QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E L L ++ + L D + S+ASA +L + + +HG+ + + + D +++S
Sbjct: 86 ELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSS 145
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS----- 306
++ MY +CG + AR VFD + ++ + W ++++GY+ NG++ EAL LF M
Sbjct: 146 LIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMPGRTLFAW 205
Query: 307 ---------------------DCKPNPVT---ALILVSA---CTYLGSRQLGRKFHGYII 339
D + + V+ A +L SA L + LGR+ H +
Sbjct: 206 TALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTM 265
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ NAV+DMY+KC D+ +A +F +I + R++ SW ++ G HG +A
Sbjct: 266 RLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEI--TGRDIISWTTMLVGEAQHGRAEEA 323
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVD 458
+ +M+ GVKP+ +TF ++ ACSHAGL+ +GR+ F M + + P ++HY C +D
Sbjct: 324 FSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLD 383
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGY 513
+L R+G L EA ++I MP P+++ W +LL AC+ + A+ L +L P++
Sbjct: 384 LLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPST 443
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+VL+SN+YA + KW V +R+ M + ++K +S IE G++ + FH + +E+
Sbjct: 444 YVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGYSWIEVGREFRLFHAGEVPIDLREEI 503
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
+E + E++ GY+PD S +HD+E+ ++EH L HSE+LAVAFGI+ +V++V
Sbjct: 504 LGFLEELVSEMRQRGYVPDTSSVMHDLEEHEKEHHLCLHSERLAVAFGILRSPLGSVIRV 563
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVCNDCH+ +FIS I++RKIIVRDA+RFHHFEGG CSC+++W
Sbjct: 564 VKNLRVCNDCHTVMKFISEIFQRKIIVRDASRFHHFEGGKCSCSEFW 610
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 228/466 (48%), Gaps = 64/466 (13%)
Query: 24 SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGE----PNTARSLFNSIHNDKSYSFLWN 79
SLR+ H+ L GL A H A ++ + Y + P+T R LF+ + L++
Sbjct: 21 SLRRAHARLIKEGL---AQHPPAPALL-VSAYAKSRLLPDT-RLLFDETPRRDLH--LYS 73
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP--FVLKACASNSLILE----GKVVH 133
+++ A +++ E+ EL + R +S+++ P FVL + AS + L GK +H
Sbjct: 74 SLLAAVSHS----ESPELVLPLLRRMLSADALR-PDHFVLASIASATARLRSLCLGKQLH 128
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G + + + SD V+++L+DMY KCG DD KVFD + ++ V WT +I+ Y + +
Sbjct: 129 GHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSD 188
Query: 194 EALILFQKTQQEGLLS------------DSVTIVS-----------------VASAVGQL 224
EAL LF+ L + +SV+ V ++SA+G
Sbjct: 189 EALELFRSMPGRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGA 248
Query: 225 GDV---LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
D+ + + +H + F + + N++V MY++C ++ AR VF+ + RD+ISW
Sbjct: 249 ADLAAHVLGRQLHSLTMRLGFSSSMIVGNAVVDMYSKCSDIHSAREVFEEITGRDIISWT 308
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+ML G Q+G+A EA L+D M + KPN VT + L+ AC++ G Q GR+ +
Sbjct: 309 TMLVGEAQHGRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDS-MKG 367
Query: 342 NMKIDATLRNAV--MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
I+ L++ +D+ ++ G L AE + + P + ++W L++ + + +
Sbjct: 368 EYGINPRLQHYTCYLDLLSRSGHLAEAEELITTM-PYVPDEATWASLLSACKKYNNAEMS 426
Query: 400 LEFFSQMLEEGVKPD----HITFTSILSACSHAGLIDEGRKCFADM 441
+ +LE ++P ++ +++ + +D RK ADM
Sbjct: 427 IRVADNLLE--LRPKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADM 470
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/580 (36%), Positives = 336/580 (57%), Gaps = 17/580 (2%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD---GCKVFDEMS 172
+L S++ L + +H ++RT + +S V + A D C+VF +
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA-SAVGQLGDVLKAQ 231
L MI A+ ++ P E LF+ ++ L + S A + GD+L
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+HG + FL D + +++ +Y+ C N A VFD + KRD +SWN + + Y++N
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 292 QASEALLLFDEMQNS--DC-KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
+ + L+LFD+M+N C KP+ VT L+ + AC LG+ G++ H +I + +
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
L N ++ MY++CG +D A +F + ERNV SW LI+G M+G G++A+E F++ML+
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMR--ERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCL 466
G+ P+ T T +LSACSH+GL+ EG F M + +KP + HY C+VD+LGRA L
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIY 521
+A+ +IK M + P+ ++W LL ACR+HG++ ++L +L+ E G +VL+ N Y
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTY 431
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
+ KW +V +LR MK K + S IE + F D +P +E+YK + +
Sbjct: 432 STVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEIN 491
Query: 582 VEIKMAGYMPDLSCALHDVE-DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVC 640
++K+AGY+ +++ LH++E +E++ + L YHSEKLA+AFGI+ P ++VTKNLR C
Sbjct: 492 QQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTC 551
Query: 641 NDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH+ +F+S +Y R +IVRD +RFHHF+GG+CSCND+W
Sbjct: 552 VDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 196/393 (49%), Gaps = 13/393 (3%)
Query: 25 LRQIHSSLTTSGLINQA---LHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
LRQIH+ L + LI + H +++ + + R ++ S+ NTM
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHC---NTM 83
Query: 82 IRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
IRA++ + E L+ ++RR S + +N + F LK C + +L G +HG I G
Sbjct: 84 IRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDG 143
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
FLSDS + L+D+Y+ C + D CKVFDE+ RD VSW V+ + Y + ++ + L+LF
Sbjct: 144 FLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFD 203
Query: 201 KTQQE---GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
K + + + D VT + A LG + + VH + N L + N++V+MY+
Sbjct: 204 KMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYS 263
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
RCG+++KA VF M +R+++SW ++++G NG EA+ F+EM P T
Sbjct: 264 RCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTG 323
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHP 375
L+SAC++ G G F + + KI L + V+D+ + LD A ++ +
Sbjct: 324 LLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME- 382
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ + + W L+ +HG S ++E
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHLIE 415
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 317/536 (59%), Gaps = 13/536 (2%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
L++MY K G D VFD+M R++VSWT MI+AY A+ ++AL +EG+ +
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
T SV A L ++ + +H I D+ ++++++ +Y+R G +E A VFD
Sbjct: 66 MFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M DL+ W+S++ G+ QN EAL LF M+ + T ++ ACT L +L
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
GR+ H +++ + D L NA++DMY KCG L+ A +F + E++V SW+ +IAG
Sbjct: 183 GRQVHVHVLKYDQ--DLILNNALLDMYCKCGSLEDANAVF--VRMVEKDVISWSTMIAGL 238
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPE 449
+G+ ++AL+ F M G+KP+++T +L ACSHAGL++EG F M +L + P
Sbjct: 239 AQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPG 298
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLF 504
+HY CM+D+LGRAG L EA D+I +M P+ W ALL ACR+H + AA +
Sbjct: 299 REHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQIL 358
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
+L+P+ G +VL+SNIYA + +W +V ++R M N+G+KK S IE K I F D
Sbjct: 359 RLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGD 418
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
R +P +E+ ++ + ++ GY+PD + L D+E E + L YHSEKLA+ FG+M+
Sbjct: 419 RSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMS 478
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
L +++ KNLR+C DCH + ++ + +R I++RD R+HHF+ G CSC D+W
Sbjct: 479 LPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 197/363 (54%), Gaps = 11/363 (3%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y +G + A+ +F+ + + S W TMI AY+ + LE M R G+
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVS--WTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N +T+ VL+AC + + +H II+ G SD +V++AL+D+Y++ G+ ++ +V
Sbjct: 64 PNMFTYSSVLRACDG---LFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
FDEM DLV W+ +I + Q +EAL LF++ ++ G L+ T+ SV A L +
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ VH + + + +DL + N+++ MY +CG++E A VF M ++D+ISW++M+ G
Sbjct: 181 ELGRQVHVHVL--KYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGL 238
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
QNG + EAL LF+ M+ KPN VT + ++ AC++ G + G ++ + + ID
Sbjct: 239 AQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEG-LYYFHSMKELFGIDP 297
Query: 348 TLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ ++D+ + G L A ++ N++ E + +W L+ +H + A+ Q
Sbjct: 298 GREHYGCMIDLLGRAGRLSEAVDLINEME-CEPDAVTWRALLNACRVHRNVDVAIHAAKQ 356
Query: 406 MLE 408
+L
Sbjct: 357 ILR 359
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 153/323 (47%), Gaps = 39/323 (12%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
M R G F Y +L++C+ L +LRQ+H + GL + + + + +I Y+ +GE
Sbjct: 57 MLREGVRPNMFTYSSVLRACDGLFNLRQLHCCIIKIGL-DSDVFVRSALIDVYSRWGELE 115
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
A +F+ + +W+++I +A N E L L+ M+R+G + T VL+A
Sbjct: 116 NALRVFDEMVTGD--LVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRA 173
Query: 120 CASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
C +L+ G+ VH +++ + D + AL+DMY KCG +D VF M +D++SW
Sbjct: 174 CTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISW 231
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
+ MI Q +EAL LF+ + G+ + VTIV V A G V
Sbjct: 232 STMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLV------------ 279
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
E L +S+ ++ E + D++ + G+ SEA+ L
Sbjct: 280 ---EEGLYYFHSMKELFGIDPGREHYGCMIDLLGR---------------AGRLSEAVDL 321
Query: 300 FDEMQNSDCKPNPVTALILVSAC 322
+EM+ C+P+ VT L++AC
Sbjct: 322 INEME---CEPDAVTWRALLNAC 341
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 138/308 (44%), Gaps = 47/308 (15%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N ++ MY + G + A+ VFD M R+++SW +M++ Y +AL M +
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
PN T ++ AC L + R+ H II + D +R+A++D+Y++ G+L+ A +
Sbjct: 64 PNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F+++ + V W+ +IAG+ + G +AL F +M G T TS+L AC+
Sbjct: 121 FDEMVTGDLVV--WSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178
Query: 430 LIDEGRKCFADMTKLS-----------------------------VKPEVKHYACMVDML 460
L++ GR+ + K V+ +V ++ M+ L
Sbjct: 179 LLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGL 238
Query: 461 GRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHGEI--------AANYLFQLEP- 508
+ G EA F+ +K + + PN +L AC G + + LF ++P
Sbjct: 239 AQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPG 298
Query: 509 -EHTGYFV 515
EH G +
Sbjct: 299 REHYGCMI 306
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/539 (37%), Positives = 312/539 (57%), Gaps = 20/539 (3%)
Query: 70 NDKSYS---FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
ND ++ F +N +I + NG E E Y MR G+ + +TFP +KAC +
Sbjct: 96 NDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLD---V 152
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
LE K +HG + + G D ++ +ALV+ Y K G + F+E+ +RD+V W M+ Y
Sbjct: 153 LEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGY 212
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q + E L F++ E ++ T+ S +GD+ + +HG+A+ + +
Sbjct: 213 AQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGV 272
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ NS++ MY +C +E A +F+MM ++D+ SWNS+++ + Q G L L D M +
Sbjct: 273 AVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGA 332
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT------LRNAVMDMYAKC 360
+P+ VT ++ AC++L + GR+ HGY+I S + D L+NAV+DMYAKC
Sbjct: 333 GIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKC 392
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G + A +F + S ++V+SWN++I GYGMHG+G +ALE FS+M E +KPD +TF
Sbjct: 393 GSMRDAHLVFERM--SNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVG 450
Query: 421 ILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+LSACSHAG + +GR M +K V P ++HY C++DMLGRAG L EA+++ MP+
Sbjct: 451 VLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIE 510
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
N VW ALL ACR+H E+AA +F+LEPEH G +VLMSN+Y A ++ EV ++R
Sbjct: 511 ANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVR 570
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
M+ + ++K S IE + F +ADR +P +Y + S+ + GY+PD+
Sbjct: 571 HTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARLXEHGYVPDV 629
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/579 (35%), Positives = 334/579 (57%), Gaps = 20/579 (3%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT------DDGCKVF 168
++LK C + I E K VH I+ S A+ V AKC + + +F
Sbjct: 35 YLLKRCHN---IDEFKQVHARFIKLSLFYSSSFSASSV--LAKCAHSGWENSMNYAASIF 89
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
+ + MI Y EEAL + + Q G D+ T + A +L +
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+ + +HG D+ +QNS++ MY RCG +E + VF+ +E + SW+SM++
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARA 209
Query: 289 QNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
G SE LLLF M ++ K + + AC G+ LG HG+++ + +++
Sbjct: 210 GMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
++ +++DMY KCG LD A ++F + +RN +++ +I+G +HG G AL FS+M+
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKME--KRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCL 466
+EG++PDH+ + S+L+ACSH+GL+ EGR+ FA+M K V+P +HY C+VD+LGRAG L
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIY 521
EA + I+ +P+ ND +W L CR+ G+IAA L +L + G ++L+SN+Y
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLY 447
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
+ W +V + R ++ KGLK+ FS++E F + DR +P KE+YK + M
Sbjct: 448 SQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQME 507
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
++K GY PDL+ L +V++E+++ L HS+K+A+AFG++ P +++++ +NLR+C+
Sbjct: 508 WQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCS 567
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH+ + IS IY R+I+VRD NRFH F+GGTCSC DYW
Sbjct: 568 DCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 201/390 (51%), Gaps = 12/390 (3%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---A 61
G E Y LLK C+ + +Q+H+ L + + ++ K G N+ A
Sbjct: 28 GKEQECLY--LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYA 85
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
S+F I D +F +NTMIR Y N E L Y+ M + G +++T+P +LKAC
Sbjct: 86 ASIFRGI--DDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACT 143
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
I EGK +HG + + G +D +VQ +L++MY +CG+ + VF+++ + SW+
Sbjct: 144 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203
Query: 182 MITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
M++A E L+LF+ E L ++ +VS A G + ++HG+ + N
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
++ +Q S+V MY +CG ++KA +F MEKR+ +++++M++G +G+ AL +F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYA 358
+M +P+ V + +++AC++ G + GR+ ++ K++ T + ++D+
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG-KVEPTAEHYGCLVDLLG 382
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
+ G L+ A I P E+N W ++
Sbjct: 383 RAGLLEEALETIQSI-PIEKNDVIWRTFLS 411
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/538 (37%), Positives = 318/538 (59%), Gaps = 9/538 (1%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M G S+ + + + AC + EG+ VH +I + ++ LV MY +CG
Sbjct: 1 MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
DD V D M R +VSWT MI+ Y Q E+ EAL LF K + G + + T+ +V ++
Sbjct: 61 LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
+ + + VH + F + + +S++ MYA+ N+++AR VFD + +RD++S
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
++++GY Q G EAL LF ++ + + N VT LV+A + L S G++ H I+
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ L+N+++DMY+KCG L + +F+++ ER+V SWN ++ GYG HG G + +
Sbjct: 241 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNM--LERSVVSWNAMLMGYGRHGLGHEVI 298
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDM 459
F + +E VKPD +T ++LS CSH GL+DEG F + K S HY C++D+
Sbjct: 299 SLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 357
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYF 514
LGR+G L +A ++I+ MP S+WG+LL ACR+H GE+ A L ++EPE+ G +
Sbjct: 358 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNY 417
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
V++SNIYAA+ W++V K+R+ M K + K S I K I FH+++R +P K++
Sbjct: 418 VILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDIN 477
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
K++ + V+IK AG++PDLSC LHDV+DE +E ML HSEKLA+ FG+MN P ++
Sbjct: 478 AKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIR 535
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 210/399 (52%), Gaps = 8/399 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+H+ + T+ A+ LG +++ Y G + AR++ + + S W TMI Y
Sbjct: 30 RQVHARMITARY-RPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVS--WTTMISGY 86
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ VE L+L+ M R+G N YT VL +C+ I +GK VH +++T F S
Sbjct: 87 SQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHM 146
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V ++L+DMYAK + +VFD + RD+VS T +I+ Y Q EEAL LF++ E
Sbjct: 147 FVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSE 206
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + VT ++ +A+ L + + VH + + +QNS++ MY++CG + +
Sbjct: 207 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYS 266
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
R VFD M +R ++SWN+ML GY ++G E + LF ++ + + KP+ VT L ++S C++
Sbjct: 267 RRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHG 325
Query: 326 GSRQLGRKFHGYIINSNMKIDATLR-NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
G G ++ + T ++D+ + G L+ A N+ ++ P E S W
Sbjct: 326 GLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM-PFESTPSIWG 384
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
L+ +H + E +Q L E ++P++ ILS
Sbjct: 385 SLLGACRVHANVHVG-ELVAQKLLE-MEPENAGNYVILS 421
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/559 (34%), Positives = 334/559 (59%), Gaps = 12/559 (2%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +IR G D ++ L+ +KC D ++F ++ +T +I + +
Sbjct: 58 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EA+ L+ + E +L D+ + S+ A G + + + VH A+ F + ++
Sbjct: 118 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLR 177
Query: 252 IVAMYARCGNVEKARLVFDMMEK----RDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
I+ +Y +CG + AR VF+ M + +D + W +M+ G+++N + + AL F MQ +
Sbjct: 178 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGEN 237
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+PN T + ++SAC+ LG+ ++GR H Y+ ++++ + NA+++MY++CG +D A+
Sbjct: 238 VRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQ 297
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+++ +R+V ++N +I+G M+G R+A+E F M+ ++P ++TF +L+ACSH
Sbjct: 298 TVFDEM--KDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSH 355
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
GL+D G + F M + V+P+++HY CMVD+LGR G L EA+D+I+ M + P+ + G
Sbjct: 356 GGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLG 415
Query: 487 ALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
LL AC++H GE A L +G +VL+S++YA+S KW+E ++R MK G
Sbjct: 416 TLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAG 475
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
++K S IE +I F D +P + +Y+K+E + +++ GY P+ L D+E
Sbjct: 476 MQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIE 535
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
D ++E L HSE+LA+ +G+++ P +++V KNLRVC DCHSA + I+ I RRKI+VR
Sbjct: 536 DGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVR 595
Query: 662 DANRFHHFEGGTCSCNDYW 680
D NRFH+FE G CSC DYW
Sbjct: 596 DRNRFHYFENGACSCGDYW 614
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 225/448 (50%), Gaps = 32/448 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP----------------NTARSLFNSIH 69
+QI S L S INQ L + A++I + +P + A +F H
Sbjct: 40 KQIISLLQRSRHINQVLPIHAQLI-RNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 98
Query: 70 NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
N Y L+ +I + ++G+ +E ++LYS M I ++Y +LKAC S + EG
Sbjct: 99 NPNVY--LYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREG 156
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS----VRDLVSWTVMITA 185
+ VH ++ GF S+ V+ ++++Y KCG+ D +VF+EM +D V WT MI
Sbjct: 157 REVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDG 216
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+ + E+ AL F+ Q E + + TIV V SA QLG + + VH Y +
Sbjct: 217 FVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELN 276
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
L + N+++ MY+RCG++++A+ VFD M+ RD+I++N+M++G NG++ +A+ LF M
Sbjct: 277 LFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVG 336
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+P VT + +++AC++ G G + FH + ++ ++D+ + G L+
Sbjct: 337 RRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLE 396
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM---LEEGVKPDHITFTSI 421
A ++ + + ++ L++ MH K LE Q+ LE+ + D T+ +
Sbjct: 397 EAYDLIRTMKMTPDHI-MLGTLLSACKMH----KNLELGEQVAKELEDRGQADSGTYVLL 451
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPE 449
+ +G E + A M + ++ E
Sbjct: 452 SHVYASSGKWKEAAQVRAKMKEAGMQKE 479
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 18/284 (6%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C +LR+ +HS G + L + +I+ Y GE AR +F + D
Sbjct: 143 ILKACGSQLALREGREVHSRALKLGFSSNRL-VRLRIMELYGKCGELGDARRVFEEMPED 201
Query: 72 --KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
+ W MI + N LE + M+ + N +T VL AC+ + G
Sbjct: 202 VVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 261
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ VH + + + +V AL++MY++CG D+ VFDEM RD++++ MI+
Sbjct: 262 RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMN 321
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
K +A+ LF+ L +VT V V +A G V G+ I ++ D ++
Sbjct: 322 GKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLV-----DFGFEIFHSMARDYRVE 376
Query: 250 NSI------VAMYARCGNVEKA-RLVFDMMEKRDLISWNSMLTG 286
I V + R G +E+A L+ M D I ++L+
Sbjct: 377 PQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA 420
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/707 (31%), Positives = 387/707 (54%), Gaps = 36/707 (5%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLI-----------NQALH---------- 43
G S+ G+Y++ L+ + L + + S T S ++ Q LH
Sbjct: 181 GYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNS 240
Query: 44 ---LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYST 100
+ ++ Y + P AR +F+ + S ++ NTMI Y E+++++
Sbjct: 241 VSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTY--NTMICGYLKLEMVEESVKMF-L 297
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
+ T VL AC + K ++ ++R GF+ +S V+ L+D+YAKCG
Sbjct: 298 ENLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGD 357
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
VF+ M +D VSW +I+ Y Q+ EA+ LF+ +D +T + + S
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISL 417
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
+L D+ + +H I + DL + N+++ MYA+CG V + +F+ M D ++W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTW 477
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N++++ ++ G + L + +M+ + P+ T L+ + C L +++LG++ H ++
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ + + NA+++MY+KCG L+++ +F + S R+V +W +I YGM+G G KAL
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLESSFRVFERM--SRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDM 459
E F M + G+ PD + F +++ ACSH+GL+++G CF M T + P ++HYAC+VD+
Sbjct: 596 ESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYF 514
L R+ + +A + I+ MP+ P+ S+W ++L ACR G++ + + +L P+ GY
Sbjct: 656 LSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
+L SN YAA KW +V +R+ +++K +KK +S IE GK + F + D P + ++
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIH 775
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDV-EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
K +E + + GY+PD ++ E+E++ ++ HSE+LA+AFG++N P +QV
Sbjct: 776 KSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQV 835
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC+DCH + IS I R+I+VRDANRFH F+ G CSC D W
Sbjct: 836 MKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 268/494 (54%), Gaps = 8/494 (1%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+ F + L S + L LR+IH+ + + GL G K+I KY+ + P ++ S+F
Sbjct: 6 SSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSG-KLIDKYSHFRAPASSLSVFRR 64
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ K+ ++WN++IRA++ NG + LE Y +R S +S + YTFP V+KACA
Sbjct: 65 VSPAKNV-YIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G +V+ I+ GF SD YV ALVDMY++ G +VFDEM VRDLVSW +I+ Y
Sbjct: 124 MGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
EEAL ++ + + ++ DS T+ SV A L V + Q +HG+ + +
Sbjct: 184 SHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSV 243
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N ++AMY + AR VFD M RD +++N+M+ GY++ E++ +F ++N D
Sbjct: 244 VNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMF--LENLD 301
Query: 308 -CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
KP+ +T ++ AC +L L + + Y++ + +++T++N ++D+YAKCGD+ TA
Sbjct: 302 QFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITA 361
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
++FN + ++ SWN +I+GY G +A++ F M+ + DHIT+ ++S +
Sbjct: 362 RDVFNSMEC--KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLST 419
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+ G+ ++ K + ++ ++DM + G + ++ + M + W
Sbjct: 420 RLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG-TLDTVTWN 478
Query: 487 ALLLACRIHGEIAA 500
++ AC G+ A
Sbjct: 479 TVISACVRFGDFAT 492
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/579 (35%), Positives = 340/579 (58%), Gaps = 20/579 (3%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQT------DDGCKVF 168
++LK C + I E K VH I+ S A+ V AKC + + +F
Sbjct: 36 YLLKRCNN---IDEFKQVHARFIKLSLFCSSSFSASSV--LAKCAHSGWENSMNYAASIF 90
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
+ + MI Y E AL + + + G+ D+ T + A +L +
Sbjct: 91 RGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACTRLKAIR 150
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+ + +HG+ D+ +QNS++ MY RCG +E + VF+ +E + SW+SM + +
Sbjct: 151 EGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSSMFSACV 210
Query: 289 QNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
G SE L+LF EM + ++ K + +SAC G+ LG HG+++ + +++
Sbjct: 211 GMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRNISELNI 270
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
++ +++DMY KCG +D A ++F + +RN +++ +I+G+ +HG G AL FS+M+
Sbjct: 271 IVKTSLVDMYVKCGCIDNALHIFQKM--EKRNNLTYSAMISGFALHGEGESALRMFSEMI 328
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCL 466
+EG++PDH+ + S+L+ACSH+GL+ EGR+ F +M K V+P +HY C+VD+LGRAG L
Sbjct: 329 KEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLL 388
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIY 521
EA + I+ +P+ ND VW + L CR+H G+IAA L +L + G ++L+SN+Y
Sbjct: 389 EEALETIQSIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGDYLLISNMY 448
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
+ ++ W +V + R ++ KGLK+ FS ++ F + DR +P KE+YK + M
Sbjct: 449 SQAHMWDDVARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEIYKMLHQME 508
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
++K GY PDL+ L +V++E+++ L HS+K+A+AF ++ P +++++ +NLR+C+
Sbjct: 509 WQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFALLYTPPGSIIKIARNLRMCS 568
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH+ + IS IY R+I+VRD NRFH F+GGTCSC DYW
Sbjct: 569 DCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 607
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 213/429 (49%), Gaps = 27/429 (6%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT---A 61
G E Y LLK CN + +Q+H+ L + + ++ K G N+ A
Sbjct: 29 GKEQECLY--LLKRCNNIDEFKQVHARFIKLSLFCSSSFSASSVLAKCAHSGWENSMNYA 86
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
S+F I D +F + TMIR Y N L Y+ M GI +++T+P +LKAC
Sbjct: 87 ASIFRGI--DDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLLKACT 144
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTV 181
I EGK +HG + + G +D +VQ +L++MY +CG+ + VF+++ + SW+
Sbjct: 145 RLKAIREGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAASWSS 204
Query: 182 MITAYEQAEKPEEALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
M +A E L+LF++ +E L ++ +VS SA G + ++HG+ + N
Sbjct: 205 MFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGFLLRN 264
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
++ ++ S+V MY +CG ++ A +F MEKR+ +++++M++G+ +G+ AL +F
Sbjct: 265 ISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMF 324
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYA 358
EM +P+ V + L++AC++ G + GR+ G ++ K++ T + ++D+
Sbjct: 325 SEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEG-KVEPTAEHYGCLVDLLG 383
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+ G L+ A I P E+N W ++ +H + ++ I
Sbjct: 384 RAGLLEEALETIQSI-PIEQNDVVWRSFLSQCRVH---------------QNIELGQIAA 427
Query: 419 TSILSACSH 427
+L CSH
Sbjct: 428 QELLKLCSH 436
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/659 (33%), Positives = 350/659 (53%), Gaps = 50/659 (7%)
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
+TA F S+ Y+ W+TMI A ++ G + +Y I+ + ++
Sbjct: 277 DTAIKFFESMIERNEYT--WSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA----LIT 330
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
A I + +++ I +S AL+ Y + G ++ ++FD+M R+ +S
Sbjct: 331 GLAQCGRIDDARILFEQIPEPIVVS----WNALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
W MI Y Q + EEAL L Q+ + G+L ++ S+ A + + VH A+
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
+ N+++ MY +C N+E AR VF M +D++SWNS L +QN EA
Sbjct: 447 KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARN 506
Query: 299 LFDEMQNSD----------------------------CK---PNPVTALILVSACTYLGS 327
FD M + D C+ PN IL+ C LG+
Sbjct: 507 TFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGA 566
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
++G++ H I M + + NA++ MY KCG D+ +F+ + ER++ +WN +I
Sbjct: 567 SKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADS-RRIFDLME--ERDIFTWNTII 623
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSV 446
GY HG GR+A++ + M GV P+ +TF +L+ACSHAGL+DEG K F M++ +
Sbjct: 624 TGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGL 683
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAAN 501
P +HYACMVD+LGR G + A I MP+ P+ +W ALL AC+IH G+ AA
Sbjct: 684 TPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAE 743
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
LF++EP + G +V++SNIY++ W EV ++R+ MK +G+ K S + + F
Sbjct: 744 KLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFV 803
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
T D+ + +E+ +E + +K GY+PD LHD+++E +E L YHSEKLAVA+
Sbjct: 804 TGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYC 863
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ +Q+ KNLR+C DCH+ +F+S++ +R+I +RD NRFHHF G+CSC D+W
Sbjct: 864 LLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 221/497 (44%), Gaps = 55/497 (11%)
Query: 24 SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
++R H L SG + LG G AR +F+++ + WN+MI
Sbjct: 24 AVRHAHGELEVSGCSARIRDLG--------RLGRVGEAREVFDAM--PRRDIIAWNSMIS 73
Query: 84 AYANNGHCVETLELY-----STMRRSGISSNSY-TFPFVLKACASNSLILEGKVV----- 132
AY +NG +LY MR I + Y VL+A +LE V
Sbjct: 74 AYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAM 133
Query: 133 ------HGDIIRTGFLSDSYVQA------ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+GDI L D+ +++ Y Q D +F++M R+LVSWT
Sbjct: 134 ISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWT 193
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
VMI+ Y + E +A +F K +EGLL D S SAV LG++ +++ A+
Sbjct: 194 VMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKT 253
Query: 241 AFLEDLCIQNSIVAMYARCGNV-EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
F D+ I +I+ +Y+R +V + A F+ M +R+ +W++M+ G+ A+ +
Sbjct: 254 GFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAV 313
Query: 300 F--DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR-NAVMDM 356
+ D +++ C+ TALI G Q GR I+ + + NA++
Sbjct: 314 YERDPVKSIACR----TALI-------TGLAQCGRIDDARILFEQIPEPIVVSWNALITG 362
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y + G ++ A+ +F+ + RN SW +IAGY +G +AL ++ G+ P
Sbjct: 363 YMQNGMVNEAKELFDKM--PFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLS 420
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC--MVDMLGRAGCLYEAFDMIK 474
+ TSI ACS+ ++ G + + K V + +AC ++ M G+ + A +
Sbjct: 421 SLTSIFFACSNIVALETGTQVHSLAVK--VGCQFNSFACNALITMYGKCRNMEYARQVFS 478
Query: 475 QMPLPPNDSVWGALLLA 491
+M + + W + L A
Sbjct: 479 RM-VTKDIVSWNSFLAA 494
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 237/695 (34%), Positives = 371/695 (53%), Gaps = 59/695 (8%)
Query: 30 SSLTTSGLINQA------LHLGA-----KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLW 78
S L+ G IN+A L A I+ Y + G P AR LF+ + S W
Sbjct: 25 SRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVS--W 82
Query: 79 NTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLIL-----EGKVV 132
N ++ Y N VE ++ M R+ +S + ++ + + L E V
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 133 HGDIIRTGFLSDSYVQAA--LVDMYA---------------KCGQTDDGCKVFDEMSVRD 175
++ G + D + A L DM + G+ D+ +FDEM R+
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV--SVASAVGQLGDVLKAQAV 233
+V+WT MIT Y Q + + A LF+ ++ +S + ++ +++ + + + +
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
CNA ++ + G + KAR VFD+ME RD +W M+ Y + G
Sbjct: 263 KPVIACNA----------MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFE 312
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EAL LF +MQ +P+ + + ++S C L S Q GR+ H +++ D + + +
Sbjct: 313 LEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVL 372
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
M MY KCG+L A+ +F+ S +++ WN +I+GY HG G +AL+ F +M G P
Sbjct: 373 MTMYVKCGELVKAKLVFDRF--SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMP 430
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
+ +T +IL+ACS+AG ++EG + F M +K V P V+HY+C VDMLGRAG + +A ++
Sbjct: 431 NKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490
Query: 473 IKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKW 527
I+ M + P+ +VWGALL AC+ H E+AA LF+ EP++ G +VL+S+I A+ +KW
Sbjct: 491 IESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKW 550
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN-PYWKEVYKKVESMAVEIKM 586
+V +R++M+ + K S IE GK + F N P + +E ++
Sbjct: 551 GDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLRE 610
Query: 587 AGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHS 645
AGY PD S LHDV++E++ L+ HSE+LAVA+G++ L PE V ++V KNLRVC DCH+
Sbjct: 611 AGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKL-PEGVPIRVMKNLRVCGDCHA 669
Query: 646 AFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
A + IS + R+II+RDANRFHHF G CSC DYW
Sbjct: 670 AIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 168/386 (43%), Gaps = 59/386 (15%)
Query: 136 IIRTGFLSDSYVQAAL-VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
I+R +L+ + V + + ++ G+ ++ K FD + + + SW +++ Y P+E
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKE 66
Query: 195 ALILFQKTQQE------GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
A LF + + GL+S + + A + + V A+ ++++ +
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMV 126
Query: 249 --------------QNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+ S M+ G ++KAR ++DMM +D+++ +M+ G + G
Sbjct: 127 GEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREG 186
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH---------------- 335
+ EA L+FDEM+ N VT +++ + RK
Sbjct: 187 RVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLL 242
Query: 336 GYIINSNMKIDATLRNAVMDM------------YAKCGDLDTAENMFNDIHPSERNVSSW 383
GY ++ ++ DA VM M + + G++ A +F+ + +R+ ++W
Sbjct: 243 GYTLSGRIE-DAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLME--DRDNATW 299
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
+I Y G +AL+ F+QM ++GV+P + SILS C+ + GR+ A + +
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEA 469
+V + ++ M + G L +A
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKA 385
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 118/263 (44%), Gaps = 57/263 (21%)
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
++ +R G + +AR FD ++ + + SWNS+++GY NG EA LFDEM N
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NV 79
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
V+ LVS GYI N M ++ A N+F +
Sbjct: 80 VSWNGLVS---------------GYIKN-RMIVE-------------------ARNVF-E 103
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ P ERNV SW ++ GY G +A F +M E + +++T + G ID
Sbjct: 104 LMP-ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRID 158
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALL 489
+ RK + DM + VK +V M+ L R G + EA FD +++ N W ++
Sbjct: 159 KARKLY-DM--MPVK-DVVASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTMI 210
Query: 490 LACRIHGEI-AANYLFQLEPEHT 511
R + + A LF++ PE T
Sbjct: 211 TGYRQNNRVDVARKLFEVMPEKT 233
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/636 (35%), Positives = 351/636 (55%), Gaps = 57/636 (8%)
Query: 99 STMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS---YVQAALVDMY 155
ST+ + + S F +L++CA NS + GK +H I+ +G S S ++ AL +Y
Sbjct: 4 STINFTTLQSLPARFRSLLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLY 63
Query: 156 AKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQ-AEKPEEALILFQKTQQEGLLSDSV 212
A CG T +F ++ S +D+ WT ++T+ Q KP E F++ ++EG++ D V
Sbjct: 64 ASCGVTSSARHLFYQIPRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDV 123
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG------------ 260
++SV ++ D+ + G + + + N+I+ MY +CG
Sbjct: 124 AMISVFVLCTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEM 183
Query: 261 -------------------NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
VE R+VFD M +R+ + W M+ GY+ NG + E LL D
Sbjct: 184 NERNVVSWSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLD 243
Query: 302 EM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAK 359
EM N VT ++SAC G +GR H Y + ++ + A++DMYAK
Sbjct: 244 EMVLRFRLGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAK 303
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG +D A +F + +RNV +WN ++ G MHG G+ L+ F +M+EE KPD +TF
Sbjct: 304 CGPIDMAFKVFKYL--PKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIEEA-KPDDLTFM 360
Query: 420 SILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
++LSACSH+GL+D+G F + ++ P+++HYACMVD+LGRAG L EA +IK+MP+
Sbjct: 361 AVLSACSHSGLVDQGYHYFRSLESEYGTTPKIEHYACMVDILGRAGHLEEAVMLIKKMPM 420
Query: 479 PPNDSVWGALLLACRIHGEIAA-----NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKL 533
PN+ V G+LL +C HG++ L Q++ +T Y VL+SN+Y K + L
Sbjct: 421 CPNEVVLGSLLGSCNAHGKLQLGERILQELIQMDGHNTEYHVLLSNMYVLEGKQDKANSL 480
Query: 534 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
R+ +K+KG++K S I G +I F D+ +P KE+Y + +M +++AGY+P+
Sbjct: 481 RQILKSKGIRKVPGVSSIYVGGNIHQFSAGDKSHPLTKEIYHALNNMIQRLRLAGYVPNT 540
Query: 594 SCALHDVED---------EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCH 644
+ + D E++E L HSEKLAV FG ++ P A + + KNLR+C DCH
Sbjct: 541 TNQVFPGSDGREGSSEEMEEKEQALFLHSEKLAVCFGHISTKPGAPLYIFKNLRICQDCH 600
Query: 645 SAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
SA + +S IY R+I++RD NRFH F+ G+CSC+DYW
Sbjct: 601 SAIKIVSKIYNREIVIRDRNRFHCFKHGSCSCSDYW 636
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 169/361 (46%), Gaps = 54/361 (14%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGL---------INQALHLGAKIIIKYTTYGEPN 59
+ LL+SC + L++ +++H+ + TSGL +N HL Y + G +
Sbjct: 18 FRSLLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHL-------YASCGVTS 70
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNG-HCVETLELYSTMRRSGISSNSYTFPFVLK 118
+AR LF I W T++ + +G E + MR+ G+ + V
Sbjct: 71 SARHLFYQIPRSHKDVTDWTTLLTSLVQHGTKPSEGFFFFKEMRKEGVVLDDVAMISVFV 130
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
C + G+ G +++ G V A+++MY KCG ++ +VF EM+ R++VS
Sbjct: 131 LCTRVEDLGMGRQAQGCLVKMGLGLGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVS 190
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQ--------------------EGLL---------- 208
W+ ++ + E E ++F + + EG L
Sbjct: 191 WSTLLEGVVKWEGVENGRVVFDEMPERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFR 250
Query: 209 --SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKA 265
+ VT+ S+ SA Q GDVL + VH YA+ E + + ++V MYA+CG ++ A
Sbjct: 251 LGLNFVTLSSILSACAQSGDVLMGRWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMA 310
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF + KR++++WN+ML G +G+ L +F +M + KP+ +T + ++SAC++
Sbjct: 311 FKVFKYLPKRNVVAWNAMLGGLAMHGRGKFVLDIFPKMIE-EAKPDDLTFMAVLSACSHS 369
Query: 326 G 326
G
Sbjct: 370 G 370
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/564 (35%), Positives = 332/564 (58%), Gaps = 21/564 (3%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC---KVFDEMSVRDLVSWTVMITAYEQ 188
+H IIRT + V + A G D + F ++S + + MI A
Sbjct: 22 IHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQLSHPLVSHYNTMIRACSM 81
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE---- 244
++ P++ L+L++ ++ G+ +D ++ + + + VH CN F +
Sbjct: 82 SDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVH----CNIFKDGHQW 137
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D + +++ +Y+ C A VFD M RD ++WN M++ I+N + +AL LFD MQ
Sbjct: 138 DTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRNNRTRDALSLFDVMQ 197
Query: 305 NSD--CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
S C+P+ VT L+L+ AC +L + + G + HGYI+ + L N+++ MY++CG
Sbjct: 198 GSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDALNLCNSLISMYSRCGC 257
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
LD A +F + +NV SW+ +I+G M+G+GR+A+E F +ML GV PD TFT +L
Sbjct: 258 LDKAYEVFKGM--GNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVL 315
Query: 423 SACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
SACS++G++DEG F M++ V P V HY CMVD+LGRAG L +A+ +I M + P+
Sbjct: 316 SACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPD 375
Query: 482 DSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRED 536
++W LL ACRIHG + +L +L+ + G +VL+ NIY+++ W +V ++R+
Sbjct: 376 STMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKL 435
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCA 596
MKNK ++ S IE + F D + +E+Y+ ++ + ++++AGY+ +LS
Sbjct: 436 MKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEINHQLRIAGYVVELSSE 495
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
LH ++D+++ ++L++HSEKLAVAFG++ P +++V NLRVC DCH+ + S +Y R
Sbjct: 496 LHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVCVDCHNFLKLFSGVYNR 555
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
+++RD NRFHHF GG CSC+DYW
Sbjct: 556 DVVLRDHNRFHHFRGGRCSCSDYW 579
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 206/438 (47%), Gaps = 30/438 (6%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+KS + L QIH+ H+ +I+Y T +R + D SYS
Sbjct: 10 IKSVSHKTRLLQIHA------------HIIRTTLIQYPTVSLQFLSRIALSGPLQDASYS 57
Query: 76 --FL----------WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
F +NTMIRA + + + L LY MRR GI+++ + F +K+C
Sbjct: 58 QRFFGQLSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRF 117
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ G VH +I + G D+ + A++D+Y+ C + D CKVFDEM RD V+W VMI
Sbjct: 118 LYLPGGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMI 177
Query: 184 TAYEQAEKPEEALILFQKTQQEGLL--SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
+ + + +AL LF Q D VT + + A L + + +HGY +
Sbjct: 178 SCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMERG 237
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
+ + L + NS+++MY+RCG ++KA VF M ++++SW++M++G NG EA+ F+
Sbjct: 238 YRDALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFE 297
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKC 360
EM P+ T ++SAC+Y G G FH + + ++D+ +
Sbjct: 298 EMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRA 357
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP--DHITF 418
G LD A + + + + + W L+ +HGH ++E + D++
Sbjct: 358 GLLDKAYQLIMSM-VVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLL 416
Query: 419 TSILSACSHAGLIDEGRK 436
+I S+ H + E RK
Sbjct: 417 LNIYSSAGHWEKVAEVRK 434
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/659 (33%), Positives = 350/659 (53%), Gaps = 50/659 (7%)
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
+TA F S+ Y+ W+TMI A ++ G + +Y I+ + ++
Sbjct: 277 DTAIKFFESMIERNEYT--WSTMIAALSHGGRIDAAIAVYERDPVKSIACRTA----LIT 330
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
A I + +++ I +S AL+ Y + G ++ ++FD+M R+ +S
Sbjct: 331 GLAQCGRIDDARILFEQIPEPIVVS----WNALITGYMQNGMVNEAKELFDKMPFRNTIS 386
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
W MI Y Q + EEAL L Q+ + G+L ++ S+ A + + VH A+
Sbjct: 387 WAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAV 446
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
+ N+++ MY +C N+E AR VF M +D++SWNS L +QN EA
Sbjct: 447 KVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARN 506
Query: 299 LFDEMQNSD----------------------------CK---PNPVTALILVSACTYLGS 327
FD M + D C+ PN IL+ C LG+
Sbjct: 507 TFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGA 566
Query: 328 RQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
++G++ H I M + + NA++ MY KCG D+ +F+ + ER++ +WN +I
Sbjct: 567 SKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADS-RRIFDLME--ERDIFTWNTII 623
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSV 446
GY HG GR+A++ + M GV P+ +TF +L+ACSHAGL+DEG K F M++ +
Sbjct: 624 TGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGL 683
Query: 447 KPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAAN 501
P +HYACMVD+LGR G + A I MP+ P+ +W ALL AC+IH G+ AA
Sbjct: 684 TPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAE 743
Query: 502 YLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFH 561
LF++EP + G +V++SNIY++ W EV ++R+ MK +G+ K S + + F
Sbjct: 744 KLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFV 803
Query: 562 TADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFG 621
T D+ + +E+ +E + +K GY+PD LHD+++E +E L YHSEKLAVA+
Sbjct: 804 TGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYC 863
Query: 622 IMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ +Q+ KNLR+C DCH+ +F+S++ +R+I +RD NRFHHF G+CSC D+W
Sbjct: 864 LLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 221/497 (44%), Gaps = 55/497 (11%)
Query: 24 SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
++R H L SG + LG G AR +F+++ + WN+MI
Sbjct: 24 AVRHAHGELEVSGCSARIRDLG--------RLGRVGEAREVFDAM--PRRDIIAWNSMIS 73
Query: 84 AYANNGHCVETLELY-----STMRRSGISSNSY-TFPFVLKACASNSLILEGKVV----- 132
AY +NG +LY MR I + Y VL+A +LE V
Sbjct: 74 AYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAM 133
Query: 133 ------HGDIIRTGFLSDSYVQA------ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+GDI L D+ +++ Y Q D +F++M R+LVSWT
Sbjct: 134 ISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWT 193
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
VMI+ Y + E +A +F K +EGLL D S SAV LG++ +++ A+
Sbjct: 194 VMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKT 253
Query: 241 AFLEDLCIQNSIVAMYARCGNV-EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
F D+ I +I+ +Y+R +V + A F+ M +R+ +W++M+ G+ A+ +
Sbjct: 254 GFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAV 313
Query: 300 F--DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR-NAVMDM 356
+ D +++ C+ TALI G Q GR I+ + + NA++
Sbjct: 314 YERDPVKSIACR----TALI-------TGLAQCGRIDDARILFEQIPEPIVVSWNALITG 362
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y + G ++ A+ +F+ + RN SW +IAGY +G +AL ++ G+ P
Sbjct: 363 YMQNGMVNEAKELFDKM--PFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLS 420
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC--MVDMLGRAGCLYEAFDMIK 474
+ TSI ACS+ ++ G + + K V + +AC ++ M G+ + A +
Sbjct: 421 SLTSIFFACSNIVALETGTQVHSLAVK--VGCQFNSFACNALITMYGKCRNMEYARQVFS 478
Query: 475 QMPLPPNDSVWGALLLA 491
+M + + W + L A
Sbjct: 479 RM-VTKDIVSWNSFLAA 494
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/608 (36%), Positives = 347/608 (57%), Gaps = 18/608 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W++MI + N + L + M + NS TF L ACA+ + GK +H ++
Sbjct: 468 WSSMIAGFCFNHRSFDALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVL 526
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R G S+ YV AL+D+Y KCGQT F S +D+VSW +M++ + + AL
Sbjct: 527 RCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALS 586
Query: 198 LFQKTQQEGL-LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF + L + + ++ + +G+L +K +H A F+ + + N+++ MY
Sbjct: 587 LFNQMMYTSLGRMGACSALAACACLGRLDVGIK---LHELAQNKGFIRYVVVANALLEMY 643
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
A+ +++KA VF M ++D++SW+SM+ G+ N ++ +AL F M KPN VT +
Sbjct: 644 AKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFI 702
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
+SAC G+ + G++ H Y++ + + + NA++D+Y KCG A F+ +H S
Sbjct: 703 AALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFS-VH-S 760
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
E++V SWN++++G+ HG G AL F+QM+E G PD +TF ++ ACS AG++ +G +
Sbjct: 761 EKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWE 819
Query: 437 CFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F T K S+ P +KHYACMVD+L R G L EA+++I +MP+ P+ +VWGALL CRIH
Sbjct: 820 LFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIH 879
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
GE+AA + +LEP Y VL+ ++Y + KW +V ++R+ M+ KGL++ S
Sbjct: 880 RHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSW 939
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
+E F T D +P KE+ + + +K G+ P S +V ++D +L
Sbjct: 940 VEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVSEDD---ILC 996
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSE+LAVAFG++N TP + VTKN C CH F+ IS I RR+I VRD + H F+
Sbjct: 997 GHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFK 1056
Query: 671 GGTCSCND 678
G CSC D
Sbjct: 1057 DGDCSCGD 1064
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/464 (31%), Positives = 230/464 (49%), Gaps = 13/464 (2%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQ-----ALHLGAKIIIKYTTYGEPNT 60
P EG Y L + C + R + + + + L LG ++ +GE
Sbjct: 93 PPDEGAYVALFRLCEWR---RAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWH 149
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +F + +S WN M+ Y G E L+LY M +G+ + YTFP VL+ C
Sbjct: 150 AWRVFAKMPERDVFS--WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTC 207
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
G+ VH ++R GF + V ALV MYAKCG KVFD M++ D +SW
Sbjct: 208 GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWN 267
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI + + + E L LF + + + +TI SV A G L +V A+ +HG+A+
Sbjct: 268 AMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKR 327
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F D+ NS++ MY G + A +F ME +D +SW +M++GY +NG +AL ++
Sbjct: 328 GFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVY 387
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
M+ + P+ VT ++AC LG +G K H N + NA+++MYAK
Sbjct: 388 ALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKS 447
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
+D A +F + +E++V SW+ +IAG+ + AL +F ML VKP+ +TF +
Sbjct: 448 KHIDKAIEVFKFM--AEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIA 504
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAG 464
LSAC+ G + G++ A + + + E ++D+ + G
Sbjct: 505 ALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 548
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/628 (33%), Positives = 346/628 (55%), Gaps = 11/628 (1%)
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLK 118
AR LF+ + S W ++ Y +NG +E L L+ TM + N Y F ++
Sbjct: 80 VARILFDGMRKRNVVS--WGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIIS 137
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
+C+ + ++EG HG +++G + YV+ AL+ MY++ V+ E+ D+ S
Sbjct: 138 SCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFS 197
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
+ ++I + P EAL + + E ++ D+VT V+ L D+ VH
Sbjct: 198 YNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMF 257
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
D + ++I+ MY +CGN+ AR VF+ ++ ++++SW ++L Y QNG EAL
Sbjct: 258 RTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALN 317
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
F EM+ PN T +L+++C + + G+ H I S + + NA+++MY+
Sbjct: 318 FFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYS 377
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
K G ++ A +F ++ R+ +W+ +I G HG GR+AL F +ML P ++TF
Sbjct: 378 KSGSIEAAHKVFLEM--ICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTF 435
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+LSAC+H G + EG + K + ++P V+HY C+V +L +AG L EA + +K P
Sbjct: 436 VGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTP 495
Query: 478 LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ + W LL AC +H G+ A + Q++P G ++L+SN+YA + +W V K
Sbjct: 496 VKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVK 555
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R+ M+ + +KK S IE I F + + +P ++Y+KV+ + I+ GY+PD
Sbjct: 556 IRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPD 615
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
++ HDVEDE + ++YHSEKLA+A+G+M A ++V KNLR+C DCHSA + IS
Sbjct: 616 IAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISK 675
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ R IIVRDANRFH F G CSC DYW
Sbjct: 676 VTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 195/384 (50%), Gaps = 6/384 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLS-DSYVQA-ALVDMYAKCGQTDDGCKVFDEMSV 173
+LK A + GK++H +I T + D+ VQ +L+++YAKC Q +FD M
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQK-TQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
R++VSW ++ Y E L LF+ + + + ++ S+ G V++
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
HGYA+ + + ++N+++ MY+R +V+ A V+ + D+ S+N ++ G ++NG
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
SEAL + D M + + VT + C++L +LG + H + + + D+ + +A
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSA 270
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++DMY KCG++ A +FN + +NV SW ++A Y +G +AL FF +M +G+
Sbjct: 271 IIDMYGKCGNILNARKVFNRLQ--TKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLL 328
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
P+ TF +L++C+ + G+ + K + + +++M ++G + A +
Sbjct: 329 PNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKV 388
Query: 473 IKQMPLPPNDSVWGALLLACRIHG 496
+M + + W A++ HG
Sbjct: 389 FLEM-ICRDSITWSAMICGLSHHG 411
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 171/339 (50%), Gaps = 18/339 (5%)
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQL--GDVLKAQAVHGYAICNAFLEDLCIQ 249
P L + + L ++ ++ V++ L G ++ A + I N +D +Q
Sbjct: 9 PTHKPFLLKSSTVGHPLEHTIQLLKVSADTKNLKFGKMIHAHLI----ITNQATKDNIVQ 64
Query: 250 -NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
NS++ +YA+C + AR++FD M KR+++SW +++ GY NG E L LF M + D
Sbjct: 65 VNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDY 124
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+PN ++S+C+ G G + HGY + S + ++NA++ MY++ D+ A
Sbjct: 125 MRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAM 184
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+++ ++ +V S+N++I G +G+ +ALE +M++E + D++T+ + CSH
Sbjct: 185 SVWYEV--PGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSH 242
Query: 428 AGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
+ G + M + + + + ++DM G+ G + A + ++ N W A
Sbjct: 243 LKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQ-TKNVVSWTA 301
Query: 488 LLLACRIHG--EIAANYLFQLE-----PEHTGYFVLMSN 519
+L A +G E A N+ ++E P + VL+++
Sbjct: 302 ILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNS 340
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/656 (33%), Positives = 357/656 (54%), Gaps = 20/656 (3%)
Query: 35 SGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVET 94
+G + +G +I + G+ A+ +F+ + + S +W +I Y G +
Sbjct: 173 TGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL--IERTSVVWTLLITRYVQAGCASKV 230
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
+EL+ M G + Y+ ++ AC + G+ +H +R G +SDS V LVDM
Sbjct: 231 VELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDM 290
Query: 155 YAKCG---QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE-ALILFQKTQQEGLLSD 210
YAK + KVF M +++SWT +I+ Y Q+ E + LF++ E + +
Sbjct: 291 YAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPN 350
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
+T ++ A L D + +H + + + + N++V+MYA G +E+AR FD
Sbjct: 351 HITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFD 410
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
+ + +++S + + N S +++ D + T L+SA +G
Sbjct: 411 QLYETNILSMSPDVETERNNASCSS------KIEGMDDGVSTFTFASLLSAAASVGLLTK 464
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G+K H + + + D + N+++ MYA+CG L+ A F+++ + NV SW +I+G
Sbjct: 465 GQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEM--KDHNVISWTSIISGL 522
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPE 449
HG+ ++AL F M+ GVKP+ +T+ ++LSACSH GL+ EG++ F M K + P
Sbjct: 523 AKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPR 582
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLF 504
++HYAC+VD+L R+G + EA I +MP + VW LL ACR +G EIAAN++
Sbjct: 583 MEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVI 642
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
LEP +VL+SN+YA + W EV ++R M++K L K S ++ G I F D
Sbjct: 643 NLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGD 702
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
+P ++Y K+ ++ EIK GY+PD S LHD+ +E +E L HSEK+AVAFG++
Sbjct: 703 TSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLIT 762
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +++ KNLRVC DCHSA ++IS R+II+RD+NRFH + G CSC +YW
Sbjct: 763 TSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 232/488 (47%), Gaps = 38/488 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H L S +++ + ++ Y+ G AR +F+ + + W M
Sbjct: 60 RALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDL-VSWTAMASCL 118
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI-LEGKVVHGDIIRTGFL-S 143
A NG E+L L M G+ N++T +AC L L G VV G +++TGF +
Sbjct: 119 ARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGT 178
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D V AL+DM+A+ G +VFD + R V WT++IT Y QA + + LF
Sbjct: 179 DVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHML 238
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG--- 260
+G D ++ S+ SA +LG V Q +H A+ + D C+ +V MYA+
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMER 298
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNG-QASEALLLFDEMQNSDCKPNPVTALILV 319
++E AR VF M + +++SW ++++GY+Q+G Q + + LF EM N +PN +T L+
Sbjct: 299 SMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLL 358
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH----- 374
AC L + GR+ H +++ +++ + NA++ MYA+ G ++ A F+ ++
Sbjct: 359 KACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNIL 418
Query: 375 ------PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+ERN +S + I G +++GV TF S+LSA +
Sbjct: 419 SMSPDVETERNNASCSSKIEG-----------------MDDGVST--FTFASLLSAAASV 459
Query: 429 GLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
GL+ +G+K A K + + +V M R G L +A +M N W ++
Sbjct: 460 GLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMK-DHNVISWTSI 518
Query: 489 LLACRIHG 496
+ HG
Sbjct: 519 ISGLAKHG 526
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 189/356 (53%), Gaps = 10/356 (2%)
Query: 129 GKVVHGDIIRTGFL-SDSYVQAALVDMYAKCGQTDDGCKVFDEM-SVRDLVSWTVMITAY 186
G+ +H ++R+ L +D+ V +L+ MY+KCG + +VFD+M VRDLVSWT M +
Sbjct: 59 GRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCL 118
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV-GQLGDVLKAQAVHGYAICNAFL-E 244
+ E+L L + + GL ++ T+ + A A Q L V G+ + F
Sbjct: 119 ARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGT 178
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
D+ + +++ M+AR G++ A+ VFD + +R + W ++T Y+Q G AS+ + LF M
Sbjct: 179 DVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHML 238
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG--- 361
+ +P+ + ++SACT LGS +LG++ H + + D+ + ++DMYAK
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMER 298
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG-HGRKALEFFSQMLEEGVKPDHITFTS 420
++ A +F + NV SW LI+GY G + F +ML E ++P+HIT+++
Sbjct: 299 SMEHARKVFKTM--PRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSN 356
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+L AC++ D GR+ A + K S+ +V M +GC+ EA Q+
Sbjct: 357 LLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQL 412
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 16/281 (5%)
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMM-EKRD 276
++ + GD+ +A+H + + L+ D + NS++ MY++CG VE AR VFD M RD
Sbjct: 48 TSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRD 107
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
L+SW +M + +NG E+L L EM +PN T AC ++L R G
Sbjct: 108 LVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACF---PQELFRLAGG 164
Query: 337 YIINSNMK-----IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ +K D ++ A++DM+A+ GDL A+ +F+ + ER W +LI Y
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL--IERTSVVWTLLITRYV 222
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
G K +E F ML++G +PD + +S++SAC+ G + G++ + +L + +
Sbjct: 223 QAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSC 282
Query: 452 HYACMVDMLGRAG---CLYEAFDMIKQMPLPPNDSVWGALL 489
+VDM + + A + K MP N W AL+
Sbjct: 283 VSCGLVDMYAKLKMERSMEHARKVFKTMP-RHNVMSWTALI 322
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/682 (33%), Positives = 366/682 (53%), Gaps = 23/682 (3%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y L ++C + SL R H + + + N L ++ Y G AR +F+ +
Sbjct: 13 YKCLFEACGKIKSLFDGRLFHEQMQRT-VKNPPEFLENSVLKMYCKCGSLADARKVFDEM 71
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S WNT+I AYA NG + ++S M N T+ L++ + S +
Sbjct: 72 RERNLVS--WNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEI 129
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H IR+G S++ V A+ +MY KCG + VF++MS ++ V+WT ++ Y Q
Sbjct: 130 GKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQ 189
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
AE+ +AL LF K EG+ D V A L ++ + +HG+ + ++ +
Sbjct: 190 AERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSV 249
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+V Y +C N+E A F+ + + + +SW++++TGY Q G+ EAL F+ ++
Sbjct: 250 GTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSV 309
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
N T + AC+ L G + H I S++ +A++ MY++CG LD A
Sbjct: 310 DINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATR 369
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F I + + +W +IAGY G+ +AL+ F +M + GV+P+ +TF ++L+ACSH+
Sbjct: 370 VFESI--DDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHS 427
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+ EGR+ M+ V + HY CMVD+ RAG L EA ++I+ MP P+ W
Sbjct: 428 GLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKC 487
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL C + GE+AA LFQL+PE T ++LM N+YA+ KW+E +R+ M + L
Sbjct: 488 LLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNL 547
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM--AVEIKMAGYMPDLSCALHDV 600
+K + S I + F D+ +P +E+Y K+E++ +V + G + + DV
Sbjct: 548 RKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTE-----EDV 602
Query: 601 EDE--DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKI 658
+ +R+ L HSE+LA+AFG+++ A V V KNLR C DCH + +S I R+I
Sbjct: 603 SNSLPERKEQLLVHSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREI 662
Query: 659 IVRDANRFHHFEGGTCSCNDYW 680
+VRD+ RFHHF+ G CSCNDYW
Sbjct: 663 VVRDSFRFHHFKLGECSCNDYW 684
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 192/389 (49%), Gaps = 3/389 (0%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
M +GIS + ++ + +AC + +G++ H + RT +++ +++ MY KCG
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
D KVFDEM R+LVSW +I+AY + ++ +F + + T + +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
+ + + +H +AI + + + +I MY +CG +E A LVF+ M +++ ++W
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAW 180
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
++ GY Q + +AL LF +M N + + I++ AC L GR+ HG+I+
Sbjct: 181 TGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVK 240
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
++ + ++ ++D Y KC +L++A F I SE N SW+ LI GY G +AL
Sbjct: 241 LGLESEVSVGTPLVDFYVKCSNLESATKAFEWI--SEPNDVSWSALITGYCQMGEFEEAL 298
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDML 460
+ F + V + T+TSI ACS + G + AD K S+ + M+ M
Sbjct: 299 KTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMY 358
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
R G L A + + + P+ W A++
Sbjct: 359 SRCGRLDYATRVFESID-DPDAVAWTAII 386
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/642 (34%), Positives = 358/642 (55%), Gaps = 32/642 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y G AR +F+ + S W +M+R Y G E +L+ M R +
Sbjct: 89 MISGYVKNGMVADARKVFDVMPERNVVS--WTSMVRGYVQEGMVEEAEKLFWEMPRRNVV 146
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
S + +LK S I + K + D+I D V ++ Y + G+ D+ ++
Sbjct: 147 SWTVMIGGLLK----ESRIDDAKKLF-DMIPE---KDVVVVTNMIGGYCQVGRLDEAREL 198
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA--VGQLG 225
FDEM VR++ +WT M++ Y + + + A LF+ + +S + ++ + + +
Sbjct: 199 FDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAF 258
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
++ +A V CN ++ + G + +AR++F+ M++RD +WN+M+
Sbjct: 259 ELFEAMPVKWIVACN----------EMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIK 308
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
+ + G EAL LF MQ N + + ++S C L S GR+ H ++ S
Sbjct: 309 VFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQ 368
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + + ++ MY KCGDL A+ +FN ++V WN +I GY HG G +AL F
Sbjct: 369 DLYVASVLITMYVKCGDLVRAKGIFNRF--LFKDVVMWNSMITGYSQHGLGEEALNVFHD 426
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAG 464
M GV+PD +TF +LSACS++G + EG + F M V+P ++HYACMVD+LGRAG
Sbjct: 427 MCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAG 486
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
+ EA +++++MP+ P+ VWGALL ACR H E+A L +LEP++ G +VL+S+
Sbjct: 487 RVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSH 546
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD-RVNPYWKEVYKKVE 578
+YA +WR+V LR+ + + +K P S IE K + F D + +P + + +E
Sbjct: 547 MYATKGRWRDVEVLRKKINRRVIKFPGC-SWIEVEKKVHMFTGGDSKSHPEQHMITQMLE 605
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
++ ++ AGY PD S LHDV++E++ H L YHSE+LAVA+G++ + ++V KNLR
Sbjct: 606 KLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLR 665
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCHSA + I+ + R+II+RDANRFHHF+ G+CSC D+W
Sbjct: 666 VCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 147/342 (42%), Gaps = 64/342 (18%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSV--RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
+ Y + G + KVFD + R + SW M++AY ++ KP +AL+LF + Q +S
Sbjct: 26 ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVS 85
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
N +++ Y + G V AR VF
Sbjct: 86 ---------------------------------------FNGMISGYVKNGMVADARKVF 106
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D+M +R+++SW SM+ GY+Q G EA LF EM + N V+ +++
Sbjct: 107 DVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMP----RRNVVSWTVMIGGLLKESRID 162
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
+K I D + ++ Y + G LD A +F+++ RNV +W +++G
Sbjct: 163 DAKKLFDMIPEK----DVVVVTNMIGGYCQVGRLDEARELFDEM--KVRNVFTWTTMVSG 216
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
Y +G A + F M E + +++T++L + +G + E + F M P
Sbjct: 217 YAKNGRVDVARKLFEVMPER----NEVSWTAMLMGYTQSGRMKEAFELFEAM------PV 266
Query: 450 VKHYAC--MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
AC M+ G AG ++ A M + M ++ W A++
Sbjct: 267 KWIVACNEMILQFGLAGEMHRARMMFEGMK-ERDEGTWNAMI 307
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 22/266 (8%)
Query: 246 LCIQNSIVAMYARCGNVEKARLVFD--MMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
LC S ++ Y R G++ AR VFD + +R + SWN+M++ Y ++ + +ALLLFD+M
Sbjct: 19 LCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM 78
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
N V+ ++S G RK + N+ +++ Y + G +
Sbjct: 79 PQR----NTVSFNGMISGYVKNGMVADARKVFDVMPERNV----VSWTSMVRGYVQEGMV 130
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ AE +F ++ RNV SW V+I G A + F + E+ D + T+++
Sbjct: 131 EEAEKLFWEM--PRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEK----DVVVVTNMIG 184
Query: 424 ACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
G +DE R+ F +M +V + MV + G + A + + MP N+
Sbjct: 185 GYCQVGRLDEARELFDEMKVRNVFT----WTTMVSGYAKNGRVDVARKLFEVMP-ERNEV 239
Query: 484 VWGALLLACRIHGEIAANY-LFQLEP 508
W A+L+ G + + LF+ P
Sbjct: 240 SWTAMLMGYTQSGRMKEAFELFEAMP 265
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 28/267 (10%)
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ--NSIVAMYARCGNVEKARLVFDMME 273
S S G++GD+ A+ V N L I N++V+ Y A L+FD M
Sbjct: 24 SAISRYGRIGDIHNARKVFD----NTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMP 79
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
+R+ +S+N M++GY++NG ++A +FD M N V+ +V G + K
Sbjct: 80 QRNTVSFNGMISGYVKNGMVADARKVFDVMPER----NVVSWTSMVRGYVQEGMVEEAEK 135
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+ N+ + ++ K +D A+ +F+ I E++V +I GY
Sbjct: 136 LFWEMPRRNVVSWTVMIGGLL----KESRIDDAKKLFDMI--PEKDVVVVTNMIGGYCQV 189
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY 453
G +A E F +M V T+T+++S + G +D RK F V PE
Sbjct: 190 GRLDEARELFDEMKVRNV----FTWTTMVSGYAKNGRVDVARKLF------EVMPERNEV 239
Query: 454 ACMVDMLG--RAGCLYEAFDMIKQMPL 478
+ ++G ++G + EAF++ + MP+
Sbjct: 240 SWTAMLMGYTQSGRMKEAFELFEAMPV 266
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 333/549 (60%), Gaps = 7/549 (1%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ ACA + + + + +H + + F D+++ +L+ +Y KCG + KVFD+M +D+
Sbjct: 58 ITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDM 117
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
VSWT +I Y Q + P EA+ L + + T S+ AVG D +H
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHAL 177
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
A+ + ED+ + ++++ MYARCG ++ A VFD ++ ++ +SWN++++G+ + G A
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L++F EMQ + + T + SA +G+ + G+ H ++I S K+ A + N ++DM
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDM 297
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
YAK G + A +F + +++ +WN ++ + +G G++A+ F +M + G+ + I
Sbjct: 298 YAKSGSMIDARKVFERV--LNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQI 355
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+F IL+ACSH GL+ EG+ F + + +++PE++HY +VD+LGRAG L A I +M
Sbjct: 356 SFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKM 415
Query: 477 PLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVG 531
P+ P +VWGALL ACR+H G+ AA+++FQL+P+ +G VL+ NIYA++ W
Sbjct: 416 PMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAA 475
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
++R+ MK G+KK A S +E + F D +P +E+YK + ++++I+ GY+P
Sbjct: 476 RVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVP 535
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
D+ L V++++RE L YHSEK+A+AF ++ + A +++ KN+R+C DCHSAF++IS
Sbjct: 536 DMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAFKYIS 595
Query: 652 YIYRRKIIV 660
++ R+I++
Sbjct: 596 KVFEREIVI 604
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 199/397 (50%), Gaps = 8/397 (2%)
Query: 4 LGPSTEGFYDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
L P T Y + +C L R+IH+ L +S A L +I Y G
Sbjct: 47 LAP-TPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAF-LDNSLIHLYCKCGSVVE 104
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +F+ + N S W ++I YA N E + L M + N +TF +LKA
Sbjct: 105 AHKVFDKMRNKDMVS--WTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAV 162
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ + G +H ++ + D YV +AL+DMYA+CG+ D VFD++ ++ VSW
Sbjct: 163 GAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I+ + + E AL++F + Q+ G + T S+ SA+ +G + + + VH + I +
Sbjct: 223 ALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKS 282
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ N+++ MYA+ G++ AR VF+ + +DL++WNSMLT + Q G EA+ F
Sbjct: 283 RQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHF 342
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
+EM+ S N ++ L +++AC++ G + G+ + I N++ + V+D+ +
Sbjct: 343 EEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRA 402
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
G L+ A +F P E + W L+A MH + +
Sbjct: 403 GLLNYAL-VFIFKMPMEPTAAVWGALLAACRMHKNAK 438
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 5/202 (2%)
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
D + + + P P ++AC + RK H ++ +S DA L N+++ +Y K
Sbjct: 39 LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG + A +F+ + +++ SW LIAGY + +A+ ML+ KP+ TF
Sbjct: 99 CGSVVEAHKVFDKMR--NKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFA 156
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
S+L A G + A K +V + ++DM R G + A + ++
Sbjct: 157 SLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD-S 215
Query: 480 PNDSVWGALL--LACRIHGEIA 499
N W AL+ A + GE A
Sbjct: 216 KNGVSWNALISGFARKGDGETA 237
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/612 (35%), Positives = 349/612 (57%), Gaps = 11/612 (1%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE-GKVVHGDI 136
+ I A + ++ L ++ M R G+ N +TFP KA AS G +H
Sbjct: 87 YTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALA 146
Query: 137 IRTGFLSD-SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+R G+L D ++V A +DMY K G ++FDEM R++V+W ++T +P E
Sbjct: 147 LRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLET 206
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+ + + G + + V++ + +A + ++ + +G+ F +D+ + NS+V
Sbjct: 207 VEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDF 266
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y +C V KAR VFD M R+ +SW SM+ Y QNG EA ++ + + +P
Sbjct: 267 YGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMV 326
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+++ C L LGR H + S + + + +A++DMY KCG ++ AE +F ++
Sbjct: 327 SSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEM-- 384
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQM-LEEGVKPDHITFTSILSACSHAGLIDEG 434
+RN+ +WN +I GY G AL F +M + + P++IT ++L+ACS GL EG
Sbjct: 385 PQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEG 444
Query: 435 RKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
+ F M + ++P ++HYAC+VD+L RAG A+ +I+ MP+ P+ SVWGALL C+
Sbjct: 445 YELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCK 504
Query: 494 IHGE-----IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
+HG+ IAA LF+L+P+ +G VL+SN+ A++ +W E +R++MKN G+KK
Sbjct: 505 MHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGR 564
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S I + + F D + +E+ + + +++ AGYMPD AL+D+E+E++E
Sbjct: 565 SWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESE 624
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
+ HSEKLA+AFG++ + P +++ KNLR+C DCH AF+FIS I R+IIVRD N FHH
Sbjct: 625 VFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHH 684
Query: 669 FEGGTCSCNDYW 680
F+ CSC DYW
Sbjct: 685 FKNYECSCKDYW 696
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 319 VSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
V A S +LGR H + + + L ++++Y+K DL A PS
Sbjct: 24 VEAAIATRSARLGRAAHARALRLLSPALPPFLCAHLVNLYSKL-DLPGAAAASLAADPSP 82
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS-ACSHAGLIDEGRK 436
V S+ I+G H +AL F+ ML G++P+ TF S A S G +
Sbjct: 83 -TVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQ 141
Query: 437 CFADMTKLSVKPEVKHYAC-MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
A + P+ +C +DM + GCL A + +MP N W A++ +
Sbjct: 142 LHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMP-NRNVVAWNAVMTNAVLD 200
Query: 496 GE 497
G
Sbjct: 201 GR 202
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 334/559 (59%), Gaps = 12/559 (2%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +IR G D ++ L+ +KC D ++F ++ +T +I + +
Sbjct: 51 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 110
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+A+ L+ + + +L D+ + S+ A G + + + VH A+ + ++
Sbjct: 111 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLR 170
Query: 252 IVAMYARCGNVEKARLVFDMMEK----RDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
I+ +Y +CG + AR VF+ M + +D + W +M+ G+++N + + AL F MQ +
Sbjct: 171 IMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGEN 230
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+PN T + ++SAC+ LG+ ++GR H Y+ ++++ + NA+++MY++CG +D A+
Sbjct: 231 VRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQ 290
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+++ +R+V ++N +I+G M+G R+A+E F M+ ++P ++TF +L+ACSH
Sbjct: 291 TVFDEM--KDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSH 348
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
GL+D G K F MT+ V+P+++HY CMVD+LGR G L EA+D+I+ M + P+ + G
Sbjct: 349 GGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLG 408
Query: 487 ALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
LL AC++H GE A L +G +VL+S++YA+S KW+E ++R MK G
Sbjct: 409 TLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAG 468
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
++K S IE +I F D +P + +Y+K+E + +++ GY P+ L D+E
Sbjct: 469 MQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIE 528
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
D ++E L HSE+LA+ +G+++ P V++V KNLRVC DCHSA + I+ I RRK++VR
Sbjct: 529 DGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVR 588
Query: 662 DANRFHHFEGGTCSCNDYW 680
D NRFH+FE G CSC DYW
Sbjct: 589 DRNRFHYFENGACSCGDYW 607
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 223/448 (49%), Gaps = 32/448 (7%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP----------------NTARSLFNSIH 69
+QI S L S INQ L + A++I + +P + A +F H
Sbjct: 33 KQIISLLQRSKHINQVLPIHAQLI-RNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 91
Query: 70 NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
N Y L+ +I + ++G+ + ++LYS M I ++Y +LKAC S + EG
Sbjct: 92 NPNVY--LYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREG 149
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS----VRDLVSWTVMITA 185
+ VH ++ G S+ V+ ++++Y KCG+ D +VF+EM +D V WT MI
Sbjct: 150 REVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDG 209
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+ + E+ AL F+ Q E + + TIV V SA QLG + + VH Y +
Sbjct: 210 FVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELN 269
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
L + N+++ MY+RCG++++A+ VFD M+ RD+I++N+M++G NG++ +A+ LF M
Sbjct: 270 LFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIG 329
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+P VT + +++AC++ G G K FH + ++ ++D+ + G L+
Sbjct: 330 RRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLE 389
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ---MLEEGVKPDHITFTSI 421
A ++ + + ++ L++ MH K LE Q +LE+ + D T+ +
Sbjct: 390 EAYDLIRTMKMTPDHI-MLGTLLSACKMH----KNLELGEQVAKVLEDRGQADSGTYVLL 444
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPE 449
+ +G E + A M + ++ E
Sbjct: 445 SHVYASSGKWKEAAQVRAKMKEAGMQKE 472
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 18/284 (6%)
Query: 15 LLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK+C +LR+ +HS GL + L + +I+ Y GE AR +F + D
Sbjct: 136 ILKACGSQLALREGREVHSRALKLGLSSNRL-VRLRIMELYGKCGELGDARRVFEEMPED 194
Query: 72 --KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG 129
+ W MI + N LE + M+ + N +T VL AC+ + G
Sbjct: 195 VVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG 254
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ VH + + + +V AL++MY++CG D+ VFDEM RD++++ MI+
Sbjct: 255 RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMN 314
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
K +A+ LF+ L +VT V V +A G V G+ I ++ D ++
Sbjct: 315 GKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLV-----DFGFKIFHSMTRDYGVE 369
Query: 250 NSI------VAMYARCGNVEKA-RLVFDMMEKRDLISWNSMLTG 286
I V + R G +E+A L+ M D I ++L+
Sbjct: 370 PQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA 413
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/594 (36%), Positives = 329/594 (55%), Gaps = 43/594 (7%)
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD---DGCKVFDEMSVRDLVSWTVMIT 184
E K +H +++TG + DSY + +D VFD D W +MI
Sbjct: 58 ELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 117
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
+ +++PE +L+L+Q+ ++ T S+ A L + + +H +
Sbjct: 118 GFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEN 177
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS---------------------- 282
D+ NS++ YA GN + A L+FD + K D +SWNS
Sbjct: 178 DVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMV 237
Query: 283 ---------MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
M++GY+Q G EAL LF EMQNSD +P+ V+ +SAC LG+ + G+
Sbjct: 238 EKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 297
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
H Y+ + +++D+ L ++DMYAKCGD+ A +F +I ++V +W LI+GY H
Sbjct: 298 IHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQ--RKSVQAWTALISGYAYH 355
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKH 452
GHGR+A+ F +M + G+KP+ ITFT++L+ACS+ GL++EG+ F +M + ++KP ++H
Sbjct: 356 GHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEH 415
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLE 507
Y C+VD+L RAG L EA I++MPL PN +WGALL ACRIH GE L ++
Sbjct: 416 YGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAID 475
Query: 508 PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN 567
P H G +V +NI+A KW + + R MK +G+ K S I F DR +
Sbjct: 476 PYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 535
Query: 568 PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED-REHMLNYHSEKLAVAFGIMNLT 626
P +++ K + M +++ GY+P+L L D+ D+D RE +++ HSEKLA+ +G++
Sbjct: 536 PEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGLIKTK 595
Query: 627 PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P +++ KNLRVC DCH + IS IY+R I++RD RFHHF G CSC DYW
Sbjct: 596 PGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 202/414 (48%), Gaps = 47/414 (11%)
Query: 19 CNFLASLRQIHSSLTTSGLINQALHLGAKI--IIKYTTYGEPNTARSLFNSIHNDKSYSF 76
C+ L+QIH+ + +GLI + + + I T+ A+ +F+ D+ +F
Sbjct: 53 CSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGF--DRPDTF 110
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
LWN MIR ++ + +L LY M N+YTFP +LKAC++ S + E +H I
Sbjct: 111 LWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQI 170
Query: 137 IRTGFLSDSYVQAALVDMYA-------------------------------KCGQTDDGC 165
+ G+ +D Y +L++ YA K G+ D
Sbjct: 171 TKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIAL 230
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+F +M ++ +SWT MI+ Y QA +EAL LF + Q + D+V++ + SA QLG
Sbjct: 231 TLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLG 290
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + + +H Y D + ++ MYA+CG++ +A VF ++++ + +W ++++
Sbjct: 291 ALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALIS 350
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY +G EA+ F EMQ KPN +T +++AC+Y G + G+ +I NM+
Sbjct: 351 GYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGK-----LIFYNMER 405
Query: 346 DATLR------NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
D L+ V+D+ ++ G LD A+ ++ P + N W L+ +H
Sbjct: 406 DYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEM-PLKPNAVIWGALLKACRIH 458
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/535 (38%), Positives = 329/535 (61%), Gaps = 25/535 (4%)
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK---------TQQEGLLSDSV 212
+D +FDE+ R +VSWT +I Q ++ +A+ +F++ ++G+ DSV
Sbjct: 30 NDSRHLFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSV 89
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
+ V SA +LG + VHG I F + + N+++ YA+ G + A+ VFD M
Sbjct: 90 LLGCVVSAFSKLGWRGVTEGVHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAK-VFDGM 148
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLG 331
+ D WNS++ Y QNG ++EA +F +M ++ + + N V +S G+ QLG
Sbjct: 149 NESDHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSGNFRYNAVIMDXGLS-----GALQLG 203
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ H +I +++ + +++D+Y KC ++ A F+ + +NV SW ++AGYG
Sbjct: 204 KCIHHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKV--KNVKSWTAMVAGYG 261
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEV 450
MHG ++A+E F +M+ GVKP++ITF S+L+ACSHAG++ EG F M + V+P +
Sbjct: 262 MHGRAKEAMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGI 321
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQ 505
+HY CMVD+LGRAG L + +IK+M P+ +WG+LL ACRIH GEI+A LF+
Sbjct: 322 EHYLCMVDLLGRAGYL-XCYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFE 380
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
L+ + GY+VL+SNIYA + +W EV ++R MK++GL K FS++E I D+
Sbjct: 381 LDXSNCGYYVLLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDK 440
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P +++Y+ ++ V+++ GYMP+ + LHDV++E++ +L HSEKLAVAFGIMN
Sbjct: 441 EHPQHEKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNS 500
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P +++ + KNLR+C DC+ + I + R+I+VRD+ RFHHF+ G+CSC DYW
Sbjct: 501 VPGSIIHIIKNLRICGDCNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 24/291 (8%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H + G + + +G ++ Y +GE A+ +F+ ++ Y WN++I YA
Sbjct: 110 VHGLVIKRGF-ERCVGVGNTLMDAYAKFGEMGVAK-VFDGMNESDHY--FWNSVIAEYAQ 165
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
NG E ++ M +SG ++ + V+ + + GK +H +I+ +V
Sbjct: 166 NGLSAEAFSVFGDMVKSG----NFRYNAVIMDXGLSGALQLGKCIHHQVIKMDLEDSVFV 221
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
++VD+Y KC + + K FD M V+++ SWT M+ Y + +EA+ +F K + G+
Sbjct: 222 GTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRAKEAMEIFYKMIRSGV 281
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED-----LCIQNSIVAMYARCGNV 262
+ +T VSV +A G + + C +E LC +V + R G +
Sbjct: 282 KPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLC----MVDLLGRAGYL 337
Query: 263 EKARLVFDMMEKRDLISWNSMLTG-----YIQNGQASEALLLFDEMQNSDC 308
L+ +M K D I W S+L ++ G+ S L E+ S+C
Sbjct: 338 XCYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLF--ELDXSNC 386
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/645 (34%), Positives = 341/645 (52%), Gaps = 43/645 (6%)
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGD 135
+W I A G + + ++ M G + N++ V++ CA + GK VHG
Sbjct: 78 VWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGW 137
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA------ 189
++R G D + A++DMYAKCGQ + +VF M+ RD VSW + I A Q+
Sbjct: 138 MLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGS 197
Query: 190 -----EKP--------------------EEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
E P +AL ++ Q G++ + T + G L
Sbjct: 198 MQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGML 257
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME--KRDL-ISWN 281
+ +HG + A D +++S++ MY +CG +E A VFD RD+ +W+
Sbjct: 258 LLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWS 317
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ GY+QNG+ EAL LF M + T + +AC +G + GR+ HG +
Sbjct: 318 TMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKL 377
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
K+DA L +A++DMYAKCG+L+ A ++F+ +N++ W ++ Y HG GR A+E
Sbjct: 378 WYKLDAPLASAIVDMYAKCGNLEDARSIFD--RACTKNIAVWTSMLCSYASHGQGRIAIE 435
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
F +M E + P+ IT +LSACSH GL+ EG F M + + P ++HY C+VD+
Sbjct: 436 LFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLY 495
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GR+G L +A + I++ + VW LL ACR+H ++A+ L QLE G +V
Sbjct: 496 GRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYV 555
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
++SNIYA +NKW + +LR M+ + ++K S I + F D +P E+Y
Sbjct: 556 MLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYA 615
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
+E + +K GY +HDVEDE RE L +HSEKLA+AFGI++ +++ K
Sbjct: 616 YLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFK 675
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLRVC DCH A ++IS R+I+VRD RFHHF+ +CSC D+W
Sbjct: 676 NLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 213/424 (50%), Gaps = 40/424 (9%)
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
S + T PF S +L+L G+ G + + + +A+++ + + + D
Sbjct: 13 SPRASTHPF------SAALLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARG 66
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLG 225
VFDE R WT+ I+ + + + + F + EG + ++ + +V +G
Sbjct: 67 VFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMG 126
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
DV + VHG+ + N D+ + N+++ MYA+CG E+AR VF M +RD +SWN +
Sbjct: 127 DVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIG 186
Query: 286 GYIQNGQASEALLLFDEMQNSDCKP-NPVTALILVS-----ACTYLGSR----------- 328
IQ+G ++ LFDE D N + + ++ S A ++L
Sbjct: 187 ACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYT 246
Query: 329 --------------QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
LGR+ HG ++ + ++ DA +R+++MDMY KCG L+ A ++F+
Sbjct: 247 YSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWS 306
Query: 375 PSERNVS-SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
P R+++ +W+ ++AGY +G +AL+ F +ML EGV D T TS+ +AC++ G++++
Sbjct: 307 PLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQ 366
Query: 434 GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
GR+ + KL K + + +VDM + G L +A + + N +VW ++L +
Sbjct: 367 GRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR-ACTKNIAVWTSMLCSYA 425
Query: 494 IHGE 497
HG+
Sbjct: 426 SHGQ 429
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 137/271 (50%), Gaps = 18/271 (6%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN-DKSYSFLWNTMIRA 84
RQ+H + + L A + + ++ Y G A S+F+ + +F W+TM+
Sbjct: 264 RQLHGRVLIAALEGDAF-VRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAG 322
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
Y NG E L+L+ M R G++++ +T V ACA+ ++ +G+ VHG + + + D
Sbjct: 323 YVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLD 382
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+ + +A+VDMYAKCG +D +FD +++ WT M+ +Y + A+ LF++
Sbjct: 383 APLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTA 442
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKA-----QAVHGYAICNAFLEDLCIQNSIVAMYARC 259
E + + +T+V V SA +G V + Q Y I + N IV +Y R
Sbjct: 443 EKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEH----YNCIVDLYGRS 498
Query: 260 GNVEKARLVFDMMEKRDL----ISWNSMLTG 286
G ++KA+ + +E+ ++ I W ++L+
Sbjct: 499 GLLDKAK---NFIEENNINHEAIVWKTLLSA 526
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 87/209 (41%), Gaps = 9/209 (4%)
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
GR G + + + R +V+ + + A +F++ P+ R W + I+G
Sbjct: 29 GRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDE-RPT-RTAPVWTLTISGC 86
Query: 391 GMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
G + F++ML EG P+ +++ C+ G ++ G++ M + V +
Sbjct: 87 ARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLD 146
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIAANY-LFQLE 507
V ++DM + G A + M D+V W + AC G+I + LF
Sbjct: 147 VVLCNAVLDMYAKCGQFERARRVFGAM--AERDAVSWNIAIGACIQSGDILGSMQLFDES 204
Query: 508 P--EHTGYFVLMSNIYAASNKWREVGKLR 534
P + T + ++S + + + + LR
Sbjct: 205 PLRDTTSWNTIISGLMRSGHAADALSHLR 233
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/559 (36%), Positives = 321/559 (57%), Gaps = 10/559 (1%)
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKC--GQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
K + ++R D+++ + L++ A G ++F +L W +I Y
Sbjct: 24 KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYS 83
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
++ P A+ L++ G+ +S T V A +L + + Q +H + +
Sbjct: 84 ISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETP 143
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ N ++ +YA CG ++ A ++FD M + D SW++M++GY QNGQA EAL LF EMQ +
Sbjct: 144 LVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAEN 203
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+ T +V C LG+ LG+ H Y+ +KID L A++ MY+KCG LD A
Sbjct: 204 VSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNAL 263
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F + +ER+V++W+ +IAGY +HGHG KAL+ F M P+ +TFTS+LSACSH
Sbjct: 264 KVFQGM--AERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSH 321
Query: 428 AGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+GL+++G + F M T+ + P++KHY CMVD+ RAG + A I+ MP+ PN +W
Sbjct: 322 SGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWR 381
Query: 487 ALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
LL AC+ HG E + + +L+P +VL+SN+YA+ +W V ++R MK+K
Sbjct: 382 TLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKA 441
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
KK +S IE + F D +P +++Y + MA ++K G++ LHD++
Sbjct: 442 PKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARKLKQVGHVNSTVDVLHDID 501
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVR 661
+E++E+ L HSE+LA+A+G+++ + +++ KNLRVC DCH + IS +Y R+IIVR
Sbjct: 502 EEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDCHEVIKLISEVYNREIIVR 561
Query: 662 DANRFHHFEGGTCSCNDYW 680
D RFHHF CSCNDYW
Sbjct: 562 DRVRFHHFRERGCSCNDYW 580
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 201/384 (52%), Gaps = 9/384 (2%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKII--IKYTTYGEPNTARSLFNSIHNDKS 73
+K C + L+ I + + + L Q L +K+I T G A +F+ H+
Sbjct: 14 IKRCTRVGDLKAIQAHMVRANL-TQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNL 72
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F+WNT+IR Y+ + + + LY M GIS NSYTF FVLKAC + EG+ +H
Sbjct: 73 --FMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELH 130
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
I++ G ++ + L+ +YA CG D C +FDEM D SW+ M++ Y Q +
Sbjct: 131 SQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAV 190
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EAL LF++ Q E + SD+ T+ SV G LG + + VH Y D+ + ++V
Sbjct: 191 EALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALV 250
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
MY++CG+++ A VF M +RD+ +W++M+ GY +G +AL LFD M+ S PN V
Sbjct: 251 GMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCV 310
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFN 371
T ++SAC++ G + G + + + KI +++ ++D++ + G + A F
Sbjct: 311 TFTSVLSACSHSGLVEKGHQIF-ETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHK-FI 368
Query: 372 DIHPSERNVSSWNVLIAGYGMHGH 395
P E NV W L+ HG+
Sbjct: 369 QTMPIEPNVVLWRTLLGACKTHGY 392
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/587 (35%), Positives = 335/587 (57%), Gaps = 13/587 (2%)
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
+++ G+ ++S T+ ++K C SN + EG ++ + G ++ L++MY K
Sbjct: 51 SLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFN 110
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
+D ++FD+M R+++SWT MI+AY + + ++AL L ++ + + T SV
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
+ + DV + +H I D+ ++++++ ++A+ G E A VFD M D I
Sbjct: 171 SCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WNS++ G+ QN ++ AL LF M+ + T ++ ACT L +LG + H +I+
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ D L NA++DMY KCG L+ A +FN + ER+V +W+ +I+G +G+ ++A
Sbjct: 288 KYDQ--DLILNNALVDMYCKCGSLEDALRVFNQM--KERDVITWSTMISGLAQNGYSQEA 343
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
L+ F +M G KP++IT +L ACSHAGL+++G F M KL + P +HY CM+D
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 403
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LG+AG L +A ++ +M P+ W LL ACR+ E AA + L+PE G
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 463
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+ L+SNIYA S KW V ++R M+++G+KK S IE K I F D +P EV
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
KK+ + + GY+P+ + L D+E E E L +HSEKLA+AFG+M L E V+++
Sbjct: 524 SKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRI 583
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C DCH + S + R I++RD R+HHF+ G CSC DYW
Sbjct: 584 RKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 204/396 (51%), Gaps = 41/396 (10%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAK---------IIIKYTTYGEPNTAR 62
Y +L+K C S R +H LI + L+ +I Y + N A
Sbjct: 64 YSELIKCC---ISNRAVHEG----NLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAH 116
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
LF+ + S W TMI AY+ + LEL M R + N YT+ VL++C
Sbjct: 117 QLFDQMPQRNVIS--WTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
S + +++H II+ G SD +V++AL+D++AK G+ +D VFDEM D + W +
Sbjct: 175 MS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I + Q + + AL LF++ ++ G +++ T+ SV A L + H + + +
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KY 289
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+DL + N++V MY +CG++E A VF+ M++RD+I+W++M++G QNG + EAL LF+
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLG-------RKFHGYIINSNMKIDATLRN--AV 353
M++S KPN +T + ++ AC++ G + G +K +G ID + +
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG--------IDPVREHYGCM 401
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
+D+ K G LD A + N++ E + +W L+
Sbjct: 402 IDLLGKAGKLDDAVKLLNEME-CEPDAVTWRTLLGA 436
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/637 (34%), Positives = 351/637 (55%), Gaps = 16/637 (2%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G AR +F + S WNT++ NG +E L+L+ R S
Sbjct: 202 YAKCGLVEEARVVFCRMETRDMVS--WNTLMAGLVLNGRDLEALQLFHDSRSSITMLTES 259
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T+ V+ CA+ + + +H +++ GF S V AL+D Y K GQ D VF M
Sbjct: 260 TYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLM 319
Query: 172 S-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
S +++VSWT MI Q A LF + +++G+ + +T S + + +
Sbjct: 320 SGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTY----STILTVSEASFP 375
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+H I + + +++ Y++ + E+A +F M++++D++SW++MLT Y Q
Sbjct: 376 PQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQA 435
Query: 291 GQASEALLLFDEMQNSDCKPNPVTALILVSAC-TYLGSRQLGRKFHGYIINSNMKIDATL 349
G + A F +M KPN T + AC + LGR+FH I +
Sbjct: 436 GDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCV 495
Query: 350 RNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
+A++ MYA+ G ++ A+ +F ++R++ SWN +++GY HG+ +KAL+ F QM E
Sbjct: 496 SSALVSMYARKGSIENAQCVFE--RQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVE 553
Query: 410 GVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYE 468
G+ D +TF S++ C+HAGL++EG++ F M + + P + HYACMVD+ RAG L E
Sbjct: 554 GIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDE 613
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAA 523
+I+ MP P ++W ALL ACR+H G++AA L LEP + +VL+SNIY+A
Sbjct: 614 TMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSA 673
Query: 524 SNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE 583
+ KW+E ++R+ M K ++K A S I+ + F +D+ +P +++Y K+ +M +
Sbjct: 674 AGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAK 733
Query: 584 IKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDC 643
+K GY PD S HDV ++ +E ML HSE+LA+AFG++ P A + + KNLRV D
Sbjct: 734 LKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDG 793
Query: 644 HSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
H+ + +S I R+I++RD RFHHF+ G CSC D+W
Sbjct: 794 HTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 9/344 (2%)
Query: 102 RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQ 160
RR G ++K C S + GK +H +R G D V +LVDMY
Sbjct: 47 RRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHS 106
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
DG KVF+ M R++V+WT ++T Y QA + + LF + + EG+ + T SV S
Sbjct: 107 VLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSM 166
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
V G V Q VH +I + + NS++ MYA+CG VE+AR+VF ME RD++SW
Sbjct: 167 VASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSW 226
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N+++ G + NG+ EAL LF + ++S T +++ C L L R+ H ++
Sbjct: 227 NTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLK 286
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ A+MD Y K G LD A ++F + S+ NV SW +I G +G A
Sbjct: 287 HGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQ-NVVSWTAMIDGCIQNGDIPLAA 345
Query: 401 EFFSQMLEEGVKPDHITFTSILSACS-------HAGLIDEGRKC 437
FS+M E+GV P+ +T+++IL+ HA +I +C
Sbjct: 346 ALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYEC 389
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 208/448 (46%), Gaps = 14/448 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ G + + +G ++ Y + R +F + K W +++ Y
Sbjct: 75 KQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGML--KRNVVTWTSLLTGY 132
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
G ++ + L+ MR G+ N +TF VL AS ++ G+ VH I+ G S
Sbjct: 133 IQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTV 192
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V +L++MYAKCG ++ VF M RD+VSW ++ + EAL LF ++
Sbjct: 193 FVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSS 252
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ T +V + L + A+ +H + + F + +++ Y + G ++KA
Sbjct: 253 ITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKA 312
Query: 266 RLVFDMME-KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT--ALILVSAC 322
VF +M ++++SW +M+ G IQNG A LF M+ PN +T ++ VS
Sbjct: 313 LDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEA 372
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
++ + H +I +N + T+ A+M Y+K + A ++F I +++V S
Sbjct: 373 SF------PPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMI--DQKDVVS 424
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC-SHAGLIDEGRKCFADM 441
W+ ++ Y G A F +M G+KP+ T +S + AC S A +D GR+ A
Sbjct: 425 WSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAIS 484
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEA 469
K + + +V M R G + A
Sbjct: 485 IKHRCHDALCVSSALVSMYARKGSIENA 512
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/558 (37%), Positives = 324/558 (58%), Gaps = 15/558 (2%)
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP 192
H ++ TG + L+ + G ++F +S D + +I A +
Sbjct: 30 HAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFS 89
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
+A++ +++ ++ + T SV A L + VH + + + D +Q ++
Sbjct: 90 LDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAAL 149
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+A YA+ AR VFD M +R +++WNSM++GY QNG A+EA+ +F++M+ S +P+
Sbjct: 150 IAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDS 209
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T + ++SAC+ LGS G H I+ S + ++ L ++++M+++CGD+ A +F
Sbjct: 210 ATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYS 269
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ E NV W +I+GYGMHG+G +A+E F +M GV P+ +TF ++LSAC+HAGLID
Sbjct: 270 M--IEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLID 327
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM---PLPPNDSVWGAL 488
EGR FA M + V P V+H+ CMVDM GR G L EA+ +K + L P +VW A+
Sbjct: 328 EGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVP--AVWTAM 385
Query: 489 LLACRIHG------EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
L AC++H E+A N L EPE+ G++VL+SN+YA + + V +R M +GL
Sbjct: 386 LGACKMHKNFDLGVEVAEN-LINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGL 444
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
KK +S I+ F D+ +P E+Y ++ + K AGY P A+H++E
Sbjct: 445 KKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDELIWRCKDAGYAPVPESAMHELEG 504
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
E+RE+ L YHSEKLAVAFG+M +++ KNLR+C DCHSA +FIS + R+IIVRD
Sbjct: 505 EEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVRD 564
Query: 663 ANRFHHFEGGTCSCNDYW 680
RFHHF G+CSC+DYW
Sbjct: 565 KLRFHHFREGSCSCSDYW 582
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/449 (30%), Positives = 223/449 (49%), Gaps = 7/449 (1%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y+ ++ + L L+Q H+ L +G +++ L K++ G R LF S+ +
Sbjct: 13 YEAVVSAGPHLRRLQQAHAHLVVTG-CHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDP 71
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S FL+N++I+A + G ++ + Y M S I ++YTF V+KACA SL+ G +
Sbjct: 72 DS--FLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTL 129
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH + +G+ SDS+VQAAL+ YAK KVFDEM R +V+W MI+ YEQ
Sbjct: 130 VHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGL 189
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
EA+ +F K ++ + DS T VSV SA QLG + +H + + ++ + S
Sbjct: 190 ANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATS 249
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V M++RCG+V +AR VF M + +++ W +M++GY +G EA+ +F M+ PN
Sbjct: 250 LVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPN 309
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAENMF 370
VT + ++SAC + G GR + + + M DM+ + G L+ A
Sbjct: 310 SVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFV 369
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHAG 429
++ E + W ++ MH + +E ++ E P H S + A AG
Sbjct: 370 KGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYAL--AG 427
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVD 458
+D M + +K +V + VD
Sbjct: 428 RMDRVESVRNVMIQRGLKKQVGYSTIDVD 456
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 339/591 (57%), Gaps = 15/591 (2%)
Query: 101 MRRSGISSNSYTFPFVLKACAS---NSLILEGKVVHGDIIRTGFLS-DSYVQAALVDMYA 156
M R G+ N +TFP KA AS S I G +H IR G+L D +V A +DMY
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTI--GPQIHSLAIRFGYLPVDPFVSCAALDMYF 58
Query: 157 KCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVS 216
K G+ +F EM R++V+W ++T +P E + + ++ G L + V+ +
Sbjct: 59 KTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACA 118
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRD 276
+A + + HG+ + F D+ + NS+V Y +C KAR VFD M R+
Sbjct: 119 FFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRN 178
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
+SW SM+ Y QNG EA + + S +P ++ C L LGR H
Sbjct: 179 SVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHA 238
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
+ S + + + +A++DMY KCG ++ AE +F + +RN+ +WN +I GY G
Sbjct: 239 VAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYET--PQRNLVTWNAMIGGYAHIGDA 296
Query: 397 RKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
+ AL F M+ G P++IT +++++CS GL +G + F M + ++P +HYA
Sbjct: 297 QNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYA 356
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-----IAANYLFQLEPE 509
C+VD+LGRAG +A+++I+ MP+ P+ SVWGALL AC++HG+ IAA LF+L+P+
Sbjct: 357 CVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQ 416
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
+G VL+SN++A++ +W E +R++MKN G+KK S + + + F D +
Sbjct: 417 DSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEM 476
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
+ E+ + + +++ AGYMPD +L+D+E+E++E + HSEKLA+AFG++ + P
Sbjct: 477 YNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGV 536
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLR+C DCH AF+FIS I R+IIVRD NRFHHF+ CSC DYW
Sbjct: 537 PIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 197/429 (45%), Gaps = 14/429 (3%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
QIHS G + + + Y G AR LF + N + WN ++
Sbjct: 32 QIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVA--WNAVMTNAV 89
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+G +ET+E Y +R +G N + ACA + G+ HG +++ GF D
Sbjct: 90 LDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 149
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V ++VD Y KC VFD M VR+ VSW M+ AY Q EEA + ++ G
Sbjct: 150 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 209
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+ S + L + +A+H A+ + ++ + +++V MY +CG VE A
Sbjct: 210 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 269
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYL 325
+F +R+L++WN+M+ GY G A ALL+FD+M ++ + PN +T + ++++C+
Sbjct: 270 QIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRG 329
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
G + G + + I+ + V+D+ + G + A + + P ++S W
Sbjct: 330 GLTKDGYELF-ETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGM-PMRPSISVW 387
Query: 384 NVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
L+ MHG GR A E + L+ +H+ +++ ++ AG E +
Sbjct: 388 GALLGACKMHGKTELGRIAAEKLFE-LDPQDSGNHVLLSNMFAS---AGRWAEATDIRKE 443
Query: 441 MTKLSVKPE 449
M + +K +
Sbjct: 444 MKNVGIKKD 452
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/658 (34%), Positives = 364/658 (55%), Gaps = 51/658 (7%)
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFV 116
P AR LF+ + + S WN ++ Y NG E +++ M R+ +S + +V
Sbjct: 64 PRDARKLFDEMPDRNIIS--WNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYV 121
Query: 117 L--KACASNSL---ILEGKVVHGDIIRTGFLSDSYV-----------------QAALVDM 154
K + SL + E V ++ GFL D + + +++
Sbjct: 122 HNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHG 181
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
K G+ D+ ++FDEMS R +++WT M+T Y Q + ++A +F ++ +S + +
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSML 241
Query: 215 VSVASAVGQLGD---VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
+ G++ D + + V CNA + L + G + KAR VFD
Sbjct: 242 MGYVQN-GRIEDAEELFEVMPVKPVIACNAMISGL----------GQKGEIAKARRVFDS 290
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M++R+ SW +++ + +NG EAL LF MQ +P T + ++S C L S G
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
++ H ++ +D + + +M MY KCG+L ++ +F D PS +++ WN +I+GY
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF-DRFPS-KDIIMWNSIISGYA 408
Query: 392 MHGHGRKALEFFSQM-LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPE 449
HG G +AL+ F +M L KP+ +TF + LSACS+AG+++EG K + M + VKP
Sbjct: 409 SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPI 468
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLF 504
HYACMVDMLGRAG EA +MI M + P+ +VWG+LL ACR H E A L
Sbjct: 469 TAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLI 528
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
++EPE++G ++L+SN+YA+ +W +V +LR+ MK + ++K S E + F T
Sbjct: 529 EIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAF-TRG 587
Query: 565 RVN--PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
+N P + + K ++ + ++ AGY PD S ALHDV++E++ + L YHSE+LAVA+ +
Sbjct: 588 GINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYAL 647
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ L+ ++V KNLRVC+DCH+A + IS + R+II+RDANRFHHF G CSC DYW
Sbjct: 648 LKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 161/362 (44%), Gaps = 79/362 (21%)
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
++ G+ + K+FD + + SW M+ Y P +A LF + ++S
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIIS------ 81
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
N +V+ Y + G +++AR VFD+M +R
Sbjct: 82 ---------------------------------WNGLVSGYMKNGEIDEARKVFDLMPER 108
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGR--- 332
+++SW +++ GY+ NG+ A LF +M + N V+ +++ +G Q GR
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWTVML-----IGFLQDGRIDD 159
Query: 333 --KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
K + I + D R +++ K G +D A +F+++ SER+V +W ++ GY
Sbjct: 160 ACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEM--SERSVITWTTMVTGY 213
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEV 450
G + A + F M E+ +++TS+L G I++ + F M VKP +
Sbjct: 214 GQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVM---PVKPVI 266
Query: 451 KHYAC--MVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIHG-EIAANYLF 504
AC M+ LG+ G + +A FD +K+ ND+ W ++ +G E+ A LF
Sbjct: 267 ---ACNAMISGLGQKGEIAKARRVFDSMKER----NDASWQTVIKIHERNGFELEALDLF 319
Query: 505 QL 506
L
Sbjct: 320 IL 321
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 20/260 (7%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N + +R G + +AR +FD + + + SWNSM+ GY N +A LFDEM +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR--- 77
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N ++ LVS G RK + N+ A++ Y G +D AE++
Sbjct: 78 -NIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGKVDVAESL 132
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F + E+N SW V++ G+ G A + + + ++ D+I TS++ G
Sbjct: 133 FWKM--PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEG 186
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+DE R+ F +M++ SV + MV G+ + +A + MP + W ++L
Sbjct: 187 RVDEAREIFDEMSERSVIT----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSML 241
Query: 490 LACRIHGEIA-ANYLFQLEP 508
+ +G I A LF++ P
Sbjct: 242 MGYVQNGRIEDAEELFEVMP 261
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/644 (33%), Positives = 357/644 (55%), Gaps = 13/644 (2%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
+++ L L ++ Y+ G A+ +F +N S WNTM+ ++ G T ++
Sbjct: 678 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS--WNTMVGGFSAEGDTHGTFDV 735
Query: 98 YSTMRRSG--ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
M G + ++ T + C S + K +H ++ F+ + V A V Y
Sbjct: 736 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 795
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
AKCG +VF + + + SW +I + Q+ P +L + + GLL DS T+
Sbjct: 796 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 855
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
S+ SA +L + + VHG+ I N DL + S++++Y CG + + +FD ME +
Sbjct: 856 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 915
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
L+SWN+++TGY+QNG AL +F +M + ++ + + AC+ L S +LGR+ H
Sbjct: 916 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 975
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
Y + ++ DA + +++DMYAK G + + +FN + E++ +SWN +I GYG+HG
Sbjct: 976 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL--KEKSTASWNAMIMGYGIHGL 1033
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
++A++ F +M G PD +TF +L+AC+H+GLI EG + M + +KP +KHYA
Sbjct: 1034 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 1093
Query: 455 CMVDMLGRAGCLYEAFDMI-KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEP 508
C++DMLGRAG L +A ++ ++M + +W +LL +CRIH GE A LF+LEP
Sbjct: 1094 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 1153
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
E +VL+SN+YA KW +V K+R+ M L+K A S IE + + F +R
Sbjct: 1154 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 1213
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
++E+ + ++I GY PD HD+ +E++ L HSEKLA+ +G++ +
Sbjct: 1214 GFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEG 1273
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
++V KNLR+C DCH+A + IS + R+I+VRD RFHHF+ G
Sbjct: 1274 TTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 207/408 (50%), Gaps = 11/408 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH ++ S + L +II Y G P+ +R +F+++ + F WN +I +Y
Sbjct: 459 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNL--FQWNAVISSY 516
Query: 86 ANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ N E LE + M + + + +T+P V+KACA S + G VHG +++TG + D
Sbjct: 517 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED 576
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V ALV Y G D ++FD M R+LVSW MI + EE+ +L + +
Sbjct: 577 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 636
Query: 205 E----GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
E + D T+V+V + ++ + VHG+A+ ++L + N+++ MY++CG
Sbjct: 637 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 696
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPVTALIL 318
+ A+++F M ++++SWN+M+ G+ G + +M D K + VT L
Sbjct: 697 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 756
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
V C + ++ H Y + + + NA + YAKCG L A+ +F+ I +
Sbjct: 757 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR--SK 814
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
V+SWN LI G+ R +L+ QM G+ PD T S+LSACS
Sbjct: 815 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 220/433 (50%), Gaps = 9/433 (2%)
Query: 20 NFLASLRQIHS-SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLW 78
+FL SL+++H SL + N+ + + Y G + A+ +F+ I + S W
Sbjct: 764 SFLPSLKELHCYSLKQEFVYNELV--ANAFVASYAKCGSLSYAQRVFHGIRSKTVNS--W 819
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N +I +A + +L+ + M+ SG+ +S+T +L AC+ + GK VHG IIR
Sbjct: 820 NALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 879
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
D +V +++ +Y CG+ +FD M + LVSW +IT Y Q P+ AL +
Sbjct: 880 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 939
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F++ G+ ++++ V A L + + H YA+ + +D I S++ MYA+
Sbjct: 940 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 999
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G++ ++ VF+ ++++ SWN+M+ GY +G A EA+ LF+EMQ + P+ +T L +
Sbjct: 1000 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 1059
Query: 319 VSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
++AC + G G ++ + +S +K + V+DM + G LD A + + E
Sbjct: 1060 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 1119
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSACSHAGLIDEGRK 436
+V W L++ +H + + +++ E E KP++ S L A G ++ RK
Sbjct: 1120 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA--GLGKWEDVRK 1177
Query: 437 CFADMTKLSVKPE 449
M ++S++ +
Sbjct: 1178 VRQRMNEMSLRKD 1190
>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 836
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 247/744 (33%), Positives = 372/744 (50%), Gaps = 127/744 (17%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIK------YTTYGEPNTAR 62
Y +K+C LAS R Q+H+ + LHLGA+ I+ Y G A
Sbjct: 145 YTCTMKACGCLASTRFALQLHAHVIK-------LHLGAQTCIQNSLVDMYIKCGAITLAE 197
Query: 63 SLFNSIHNDK---------SYSFL--------------------WNTMIRAYANNGHCVE 93
++F +I + YS L WNT+I ++ GH +
Sbjct: 198 TVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIR 257
Query: 94 TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVD 153
L + M G N T+ VL ACAS S + G +H I+R D+++ + L+D
Sbjct: 258 CLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLID 317
Query: 154 MYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVT 213
MYAKCG +VF+ + ++ VSWT +I+ Q ++AL LF + +Q ++ D T
Sbjct: 318 MYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFT 377
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV----- 268
+ ++ + +HGYAI + + + N+I+ MYARCG+ EKA L
Sbjct: 378 LATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMP 437
Query: 269 --------------------------FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
FDMM +R++I+WNSML+ YIQ+G + E + L+
Sbjct: 438 LRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVL 497
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M++ KP+ VT + AC L + +LG + ++ + D ++ N+++ MY++CG
Sbjct: 498 MRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQ 557
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
+ A +F+ IH +N+ SWN ++A + +G G KA+E + ML KPDHI++ ++L
Sbjct: 558 IKEARKVFDSIHV--KNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVL 615
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
S D+LGRAG L +A ++I MP PN
Sbjct: 616 S----------------------------------DLLGRAGLLDQAKNLIDGMPFKPNA 641
Query: 483 SVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+VWGALL ACRIH E AA L +L E +G +VL++NIYA S + V +R+ M
Sbjct: 642 TVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLM 701
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG-YMPDLSCA 596
K KG++K S IE + F + +P EVY K+E M +I+ G Y+ +SCA
Sbjct: 702 KVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEMMKKIEDTGRYVSIVSCA 761
Query: 597 LHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRR 656
H + YHSEKLA AFG+++L P +QVTKNLRVCNDCH + +S + R
Sbjct: 762 -HRSQ--------KYHSEKLAFAFGLLSLPPWMPIQVTKNLRVCNDCHLVIKLLSLVTSR 812
Query: 657 KIIVRDANRFHHFEGGTCSCNDYW 680
++I+RD RFHHF+ G CSC DYW
Sbjct: 813 ELIMRDGFRFHHFKDGFCSCRDYW 836
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 189/469 (40%), Gaps = 75/469 (15%)
Query: 110 SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV-- 167
S F K C S + + +H +I +G + ++ L+ MY+ CG DD +V
Sbjct: 7 SQKFYDAFKLCGSPPI---ARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFR 63
Query: 168 -----------------------------FDEMS--VRDLVSWTVMITAYEQAEKPEEAL 196
FDEM VRD VSWT MI+ Y Q P ++
Sbjct: 64 EANHANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSI 123
Query: 197 ILF----QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
F + + + D + A G L A +H + I CIQNS+
Sbjct: 124 KTFMSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSL 183
Query: 253 VAMYARCG----------NVEKARL---------------------VFDMMEKRDLISWN 281
V MY +CG N+E L VF M +RD +SWN
Sbjct: 184 VDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWN 243
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
++++ + Q G L F EM N KPN +T ++SAC + + G H I+
Sbjct: 244 TLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRM 303
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+DA L + ++DMYAKCG L A +FN + E+N SW LI+G G AL
Sbjct: 304 EHSLDAFLGSGLIDMYAKCGCLALARRVFNSL--GEQNQVSWTCLISGVAQFGLRDDALA 361
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLG 461
F+QM + V D T +IL CS G K + V ++ M
Sbjct: 362 LFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYA 421
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-AANYLFQLEPE 509
R G +A + MPL S W A++ A +G+I A F + PE
Sbjct: 422 RCGDTEKASLAFRSMPLRDTIS-WTAMITAFSQNGDIDRARQCFDMMPE 469
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/606 (35%), Positives = 332/606 (54%), Gaps = 49/606 (8%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFL--SDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
+L +C++ E +H ++RTG L +D V L YA G+ D +
Sbjct: 295 LLTSCSTARRAAE---LHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRD 351
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+ +T I A+ AL L +GLL + T+ + A L +A+
Sbjct: 352 PTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGLS---PGRAL 408
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM--------------------- 272
HGYA A D + +++ MYAR G+ AR +FD M
Sbjct: 409 HGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGA 468
Query: 273 -----------EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+D + WN+M+ GY Q+G+ +EAL LF M S +P+ VT ++++SA
Sbjct: 469 LDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSA 528
Query: 322 CTYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
LG+ + G+ H Y+ NS +++ + A++DMY KCG L A ++F+ I ++++
Sbjct: 529 VAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGI--GDKDI 586
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
WN +I GY MHG RKALE F Q E+G+ P ITF +L+ACSH+G+++EGR+ F
Sbjct: 587 VVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQS 646
Query: 441 MTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH---- 495
M + + P+++HY CMVD+LGRAG + EAF +++ M + P+ +W +LL ACR+H
Sbjct: 647 MEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMS 706
Query: 496 -GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
G+ A+YL ++G ++L+SNIYAA W EV ++R MK G++K S IE
Sbjct: 707 LGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEID 766
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSE 614
+++ F D +P E+Y ++ M +K G++P LHD+++ +E L HSE
Sbjct: 767 REVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKALAVHSE 826
Query: 615 KLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTC 674
KLA+AFG+++ P A +++ KNLR C+DCH+ + IS I RKI+ RD NRFHHF G+C
Sbjct: 827 KLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRKIVFRDRNRFHHFVDGSC 886
Query: 675 SCNDYW 680
SC DYW
Sbjct: 887 SCGDYW 892
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 168/355 (47%), Gaps = 41/355 (11%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGA-KIIIKYTTYGEPNTARSLFNSIHNDKS 73
LL SC+ ++H+++ +GL++ A ++ Y G + + +L + +
Sbjct: 295 LLTSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTA 354
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ + I A+++ GH + L L S M G+ ++T L AC S G+ +H
Sbjct: 355 --IFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGLS---PGRALH 409
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQT-------------------------------- 161
G + DSYV AL+ MYA+ G
Sbjct: 410 GYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGAL 469
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
DD +FD + +D V W MI Y Q +P EAL LF++ G+ D VT+V V SAV
Sbjct: 470 DDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAV 529
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQ--NSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
QLG V + +H Y + N+ L ++ +++ MY +CG++ A VF + +D++
Sbjct: 530 AQLGTVESGKWLHSY-VKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVV 588
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
WN+M+ GY +G + +AL +F + + P +T + L++AC++ G + GR+F
Sbjct: 589 WNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREF 643
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 53/306 (17%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTMRRSGISSNS 110
Y G + ARSLF+ + + F+ WN MI Y +G E L L+ M SG+ +
Sbjct: 463 YADMGALDDARSLFDGL---PTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDE 519
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY-VQAALVDMYAKCGQTDDGCKVFD 169
T VL A A + GK +H + + + S V AL+DMY KCG D VF
Sbjct: 520 VTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFH 579
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
+ +D+V W MI Y +AL +F +++++GL +T + + +A
Sbjct: 580 GIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNAC-------- 631
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS-----WNSML 284
+ G VE+ R F ME+ I + M+
Sbjct: 632 ---------------------------SHSGMVEEGREFFQSMEREYGIDPKIEHYGCMV 664
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII----- 339
+ G EA L M+ + P+ V + L++AC + LG++ Y++
Sbjct: 665 DLLGRAGLIKEAFCLVQSMKIT---PDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLA 721
Query: 340 NSNMKI 345
NS M I
Sbjct: 722 NSGMYI 727
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+ +HS + S + ++ +G +I Y G A +F+ I DK +WN MI Y
Sbjct: 539 KWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGI-GDKDI-VVWNAMINGY 596
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A +G + LE++ R G+ TF +L AC+ + ++ EG+ + R + D
Sbjct: 597 AMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMERE-YGIDP 655
Query: 146 YVQ--AALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKPEEALILFQKT 202
++ +VD+ + G + + M + D V W ++ A + +
Sbjct: 656 KIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYL 715
Query: 203 QQEGLLSDSVTIV--SVASAVGQLGDVLKAQAV 233
+GL + + I+ ++ +AVG G+V + +++
Sbjct: 716 VAKGLANSGMYILLSNIYAAVGNWGEVARVRSM 748
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/585 (35%), Positives = 341/585 (58%), Gaps = 16/585 (2%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
+++NS + +++A + + + VH +I TG+ + L+ +
Sbjct: 5 VAANSAAYEAIVRA---GPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTH 61
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+F + + D + +I + + P + +++ + + T SV + L
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + VH +A+ + F D +Q ++V Y++CG++E AR VFD M ++ +++WNS+++
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
G+ QNG A EA+ +F +M+ S +P+ T + L+SAC G+ LG H YII+ + +
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ L A++++Y++CGD+ A +F+ + E NV++W +I+ YG HG+G++A+E F++
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKM--KETNVAAWTAMISAYGTHGYGQQAVELFNK 299
Query: 406 MLEE-GVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRA 463
M ++ G P+++TF ++LSAC+HAGL++EGR + MTK + P V+H+ CMVDMLGRA
Sbjct: 300 MEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRA 359
Query: 464 GCLYEAFDMIKQMPLPPN---DSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
G L EA+ I Q+ ++W A+L AC++H G A L LEP++ G+ V
Sbjct: 360 GFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHV 419
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
++SNIYA S K EV +R+ M L+K +SVIE F D + E+Y+
Sbjct: 420 MLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYR 479
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
+E++ K GY P +H VE+E++E L YHSEKLAVAFG++ T + + + K
Sbjct: 480 YLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLK-TVDVAITIVK 538
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLR+C DCHSAF++IS + R+I VRD RFHHF+ G+CSC DYW
Sbjct: 539 NLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 220/419 (52%), Gaps = 15/419 (3%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y+ ++++ + L+Q+H+ L +G ++ L K+I + LF S+
Sbjct: 12 YEAIVRAGPRVKQLQQVHAHLIVTGY-GRSRSLLTKLITLACSARAIAYTHLLFLSVPLP 70
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
FL+N++I++ + + + Y M S +S ++YTF V+K+CA S + GK
Sbjct: 71 DD--FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH + +GF D+YVQAALV Y+KCG + +VFD M + +V+W +++ +EQ
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+EA+ +F + ++ G DS T VS+ SA Q G V VH Y I ++ + +
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTA 248
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ +Y+RCG+V KAR VFD M++ ++ +W +M++ Y +G +A+ LF++M++ DC P
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED-DCGPI 307
Query: 312 P--VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM-DMYAKCGDLDTAEN 368
P VT + ++SAC + G + GR + + S I + M DM + G LD A
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367
Query: 369 MFNDIHPSERNVSS--WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD----HITFTSI 421
+ + + + + W ++ MH + +E +++ ++PD H+ ++I
Sbjct: 368 FIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI--ALEPDNPGHHVMLSNI 424
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/552 (38%), Positives = 323/552 (58%), Gaps = 13/552 (2%)
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F SD ++ L+D YA G+ +VFDE V+ + W ++ A A+ EEAL
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLA 169
Query: 201 KTQQEGLLSDSVTIVS-----VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+ + DS + +A++ + + +H +A+ + + +++
Sbjct: 170 DMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDC 229
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPV 313
YA+ G V A VF M +R+++SW +M+ Y +N + +A+LLF EM + D PN V
Sbjct: 230 YAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPNSV 289
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
T + ++ A + + G+ H YI+ ++ NA+M MY KCG L+ ++F D+
Sbjct: 290 TIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIF-DL 348
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
++V SWN LI+GYGMHG G +A++ F M + GV P+ ITF S+L ACSHAGL+DE
Sbjct: 349 IGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDE 408
Query: 434 GRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
G++ F M +V P +HYACMVD+LGRAG L EA ++I+ M + P+ VWG+LL ACR
Sbjct: 409 GKRLFESMVDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGACR 468
Query: 494 IH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
IH E+A + LF LEP + G +VL+++IYA + EVG L++ ++ L+K
Sbjct: 469 IHRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEHALEKVPGC 528
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S IE K + F + D NP +E+ + ++K GY+PD L+D+E+E++E +
Sbjct: 529 SWIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPDTGAVLYDIEEEEKEKI 588
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
L HSEKLAVAFG++N V+++TKNLR+C DCHS +FIS R+IIVRD NRFHH
Sbjct: 589 LLGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFISKYAEREIIVRDVNRFHH 648
Query: 669 FEGGTCSCNDYW 680
F G CSC DYW
Sbjct: 649 FRDGICSCGDYW 660
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 199/391 (50%), Gaps = 15/391 (3%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+H L + L ++I Y + GE AR +F+ F+WN +++A A
Sbjct: 100 VHRRLKADPVFRSDPFLSTRLIDAYASLGELPAARQVFDE--APVKSIFVWNALLKALAL 157
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKAC--ASNSLILEGKVV---HGDIIRTGFL 142
H E L + M R + +SY++ LKAC AS S + +V H +R G+
Sbjct: 158 ADHGEEALARLADMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYG 217
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK- 201
++V L+D YAK G VF M R++VSWT MI Y + E+P +A++LFQ+
Sbjct: 218 LHTHVATTLIDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEM 277
Query: 202 -TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
E L+ +SVTIV + A + + + + +H Y + F + + N+++AMY +CG
Sbjct: 278 VASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCG 337
Query: 261 NVEKARLVFDMM-EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
+E R +FD++ ++D++SWN++++GY +G EA+ +F++M PN +T + ++
Sbjct: 338 CLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVL 397
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH--PSE 377
AC++ G G++ +++ N+ A ++D+ + G LD A + +H PS
Sbjct: 398 GACSHAGLVDEGKRLFESMVDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSP 457
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ W L+ +H H A SQ+ +
Sbjct: 458 Q---VWGSLLGACRIHRHVEYAEMACSQLFD 485
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 11/230 (4%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
N L + +H+ + G + L A ++ Y G R +F+ I + K WN
Sbjct: 302 NALGQGKLLHAYILRRGFDSLVSVLNA-LMAMYMKCGCLEAGRHIFDLIGHRKDV-VSWN 359
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
T+I Y +G E ++++ M + G+S N TF VL AC+ L+ EGK + ++
Sbjct: 360 TLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMVDY 419
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS-WTVMITA---YEQAEKPEEA 195
+ A +VD+ + G D+ ++ M +R W ++ A + E E A
Sbjct: 420 NVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGACRIHRHVEYAEMA 479
Query: 196 LI-LFQKTQQEG----LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
LF + LL+D + S VG L D+L+ A+ C+
Sbjct: 480 CSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEHALEKVPGCS 529
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/623 (35%), Positives = 348/623 (55%), Gaps = 65/623 (10%)
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG--CKVFDEMSVR 174
+KAC S + E K VH +++TG D+ + ++ + A D G VFD++ R
Sbjct: 22 IKACKS---MRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPER 78
Query: 175 DLVSWTVMITAY-EQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQA 232
+ +W +I A E ++ +AL++F + E + + T SV A + + + +
Sbjct: 79 NCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQ 138
Query: 233 VHG--------------------YAICNAFLED--------------------------- 245
VHG Y +C + +ED
Sbjct: 139 VHGLLLKFGLVDDEFVVTNLLRMYVMCGS-MEDANVLFYRNVEGVDDVRNLVRDERGREF 197
Query: 246 -LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM- 303
+ + N +V YAR GN++ AR +FD M +R ++SWN M++GY QNG EA+ +F M
Sbjct: 198 NVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMM 257
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
Q D PN VT + ++ A + LG +LG+ H Y + ++ID L +A++DMYAKCG +
Sbjct: 258 QMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSI 317
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
+ A +F + + NV +WN +I G MHG + S+M + G+ P +T+ +ILS
Sbjct: 318 EKAIQVFERL--PQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILS 375
Query: 424 ACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
ACSHAGL+DEGR F DM + +KP+++HY CMVD+LGRAG L EA ++I MP+ P+D
Sbjct: 376 ACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDD 435
Query: 483 SVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDM 537
+W ALL A ++H I AA L Q+ P +G +V +SN+YA+S W V +R M
Sbjct: 436 VIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMM 495
Query: 538 KNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
K+ ++K S IE I F D + K+++ +E ++ ++ + G+MPD + L
Sbjct: 496 KDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSMLEEISNKLSLEGHMPDTTQVL 555
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
++++ +E +L+YHSEK+AVAFG+++ P+ + + KNLR+C DCHS+ + IS +Y RK
Sbjct: 556 LKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYERK 615
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I++RD RFHHFE G+CSC DYW
Sbjct: 616 IVIRDRKRFHHFEHGSCSCMDYW 638
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 223/465 (47%), Gaps = 72/465 (15%)
Query: 6 PSTEGFYDQL----LKSCNFLASLRQIHSSLTTSG------LINQALHLGAKIIIKYTTY 55
P+T +Y +L +K+C + L+Q+H+ L +G + + L L A + +
Sbjct: 8 PNTASYYPRLDVPQIKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSAT-----SDF 62
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYA--NNGHCVETLELYSTMRRSGISSNSYTF 113
+ A S+F+ + + F WNT+IRA A + H L + + + N +TF
Sbjct: 63 RDIGYALSVFDQL--PERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTF 120
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG--------- 164
P VLKACA + + EGK VHG +++ G + D +V L+ MY CG +D
Sbjct: 121 PSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVE 180
Query: 165 ---------------------CKV-----------------FDEMSVRDLVSWTVMITAY 186
C V FD M+ R +VSW VMI+ Y
Sbjct: 181 GVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGY 240
Query: 187 EQAEKPEEALILFQKTQQEG-LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
Q +EA+ +F + Q G +L + VT+VSV A+ +LG + + VH YA N D
Sbjct: 241 AQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRID 300
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ +++V MYA+CG++EKA VF+ + + ++I+WN+++ G +G+A++ M+
Sbjct: 301 DVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEK 360
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLD 364
P+ VT + ++SAC++ G GR F ++NS +K ++D+ + G L+
Sbjct: 361 CGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLE 420
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQM 406
AE + ++ P + + W L+ MH + G +A E QM
Sbjct: 421 EAEELILNM-PMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQM 464
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/464 (39%), Positives = 294/464 (63%), Gaps = 9/464 (1%)
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+ DV + +H I + F + +QNS++ +YA CG+V A VFD M ++DL++WNS+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ G+ +NG+ EAL L+ EM + KP+ T + L+SAC +G+ LG++ H Y+I +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ N ++D+YA+CG ++ A+ +F+++ ++N SW LI G ++G G++A+E F
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEM--VDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 404 SQMLE-EGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLG 461
M EG+ P ITF IL ACSH G++ EG + F M + ++P ++H+ CMVD+L
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 238
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVL 516
RAG + +A++ IK MP+ PN +W LL AC +HG E A + QLEP H+G +VL
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 298
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
+SN+YA+ +W +V K+R+ M G+KK S++E G + F D+ +P +Y K
Sbjct: 299 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 358
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
++ M ++ GY+P +S DVE+E++E+ + YHSEK+A+AF +++ + + V KN
Sbjct: 359 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 418
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LRVC DCH A + +S +Y R+I+VRD +RFHHF+ G+CSC DYW
Sbjct: 419 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 159/290 (54%), Gaps = 7/290 (2%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
G+ +H +IR+GF S YVQ +L+ +YA CG KVFD+M +DLV+W +I + +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
KPEEAL L+ + +G+ D TIVS+ SA ++G + + VH Y I +L
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
N ++ +YARCG VE+A+ +FD M ++ +SW S++ G NG EA+ LF M++++
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDT 365
P +T + ++ AC++ G + G ++ + KI+ + + ++D+ A+ G +
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
A + P + NV W L+ +HG A Q+L+ ++P+H
Sbjct: 246 AYEYIKSM-PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ--LEPNH 292
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 142/301 (47%), Gaps = 18/301 (5%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
IHS + SG +++ ++ Y G+ +A +F+ + + WN++I +A
Sbjct: 10 IHSVVIRSGF-GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA--WNSVINGFAE 66
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
NG E L LY+ M GI + +T +L ACA + GK VH +I+ G + +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ-EG 206
L+D+YA+CG+ ++ +FDEM ++ VSWT +I +EA+ LF+ + EG
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI------VAMYARCG 260
LL +T V + A G V + G+ E+ I+ I V + AR G
Sbjct: 187 LLPCEITFVGILYACSHCGMVKE-----GFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Query: 261 NVEKA-RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
V+KA + M + +++ W ++L +G + L F +Q +PN +L+
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPNHSGDYVLL 299
Query: 320 S 320
S
Sbjct: 300 S 300
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/658 (34%), Positives = 357/658 (54%), Gaps = 45/658 (6%)
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVL 117
+ AR++F+ + Y L+ MI YA N L+L+ M + +S NS ++
Sbjct: 12 DEARTVFDKVSFPDVY--LYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNS-----MI 64
Query: 118 KACASNSLIL----------EGKVVHGDIIRTGFLSDSYVQAA----------------- 150
K C + + E VV + GFL ++ A
Sbjct: 65 KGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNS 124
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL--L 208
++ Y G+ +DG ++F EM R+++SWT MI +Q + EEAL LF++ G+
Sbjct: 125 MIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVK 184
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
S T V +A + + +H + + D I +++ YA C +E + V
Sbjct: 185 PTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRV 244
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F +++ W +++TGY N + +AL +F EM PN + +++C L +
Sbjct: 245 FHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEAL 304
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
GR+ H + ++ D + N+++ MY +CG+L+ +F I S++N+ SWN +I
Sbjct: 305 DWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRI--SKKNIVSWNSVIV 362
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVK 447
G HG G AL FF+QM+ V+PD ITFT +LSACSH+G+ +GR F ++ S +
Sbjct: 363 GCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAE 422
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANY 502
++ HYACMVD+LGR+G L EA ++I+ MP+ N VW LL AC +H E AA
Sbjct: 423 VKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKC 482
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
+ LEP + +VL+SN+YA++++W +V ++R +MK +G+ K S I F +
Sbjct: 483 IIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLS 542
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
DR +P +Y+K+E + ++K GY+PD ALHDVEDE +E ML+YHSE+LA+ FG+
Sbjct: 543 GDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGL 602
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ + + V KNLRVC DCHSA + I+ I RRKIIVRD+ RFHHF G CSC DYW
Sbjct: 603 ISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 16/223 (7%)
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ + R +++AR VFD + D+ + M+TGY +N + AL LF EM D
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV--- 57
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V+ ++ C + RK + ++ T+ N + G ++ AE +F
Sbjct: 58 -VSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQF----GKIEVAEGLFY 112
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ R++++WN +I GY +G L F +M V I++TS++ G
Sbjct: 113 KM--PFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNV----ISWTSMIGGLDQHGRS 166
Query: 432 DEGRKCFADM--TKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
+E F M + VKP Y C++ A LY+ +
Sbjct: 167 EEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQI 209
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/595 (35%), Positives = 325/595 (54%), Gaps = 46/595 (7%)
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
K VH ++R G DSY+ ++ G T+ ++F + ++ + MI
Sbjct: 27 KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
+ +E++ ++ ++EGL DS T + A +L D +HG + D +
Sbjct: 87 DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVN 146
Query: 250 NSIVAMYARCGNVE--------------------------------------KARLVFDM 271
S+V++Y +CG ++ +A VFD
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M ++D++SW+SM+ GY NG EAL LF +M N +P+ + ++ AC LG+ +LG
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
+ + + L A++DMYAKCG +D+A +F + ++++ WN I+G
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMR--KKDIVVWNAAISGLA 324
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEV 450
M GH + A F QM + G++PD TF +L AC+HAGL+DEGR+ F M ++ ++ PE+
Sbjct: 325 MSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEI 384
Query: 451 KHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQ 505
+HY CMVD+LGRAG L EA ++K MP+ N VWGALL CR+H E L
Sbjct: 385 EHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIA 444
Query: 506 LEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADR 565
LEP ++G +VL+SNIY+AS+KW + K+R M +G+KK +S IE + F D
Sbjct: 445 LEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDT 504
Query: 566 VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNL 625
+P +++Y K+ + ++K +GY+P L D+E+E++EH + HSEKLA+AFG+++
Sbjct: 505 SHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLIST 564
Query: 626 TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P ++V KNLRVC DCH A + IS R+IIVRD NRFH F G+CSC DYW
Sbjct: 565 APNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 219/460 (47%), Gaps = 61/460 (13%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
+L + N L L+ +H++L GL ++ +L K++ +G N + +F H K
Sbjct: 15 RLFQGFNSLKHLKHVHAALLRLGL-DEDSYLLNKVLRFSFNFGNTNYSHRIF---HQTKE 70
Query: 74 YS-FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV- 131
+ FL+NTMI N E++E+Y +MR+ G+S +S+TFPF+LKACA +L+ K+
Sbjct: 71 PNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACAR---LLDSKLG 127
Query: 132 --VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD-------------------------- 163
+HG +++ G SD++V +LV +Y KCG D+
Sbjct: 128 IKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGV 187
Query: 164 ------------GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
C VFD M +D+VSW+ MI Y P+EAL LF K EG D
Sbjct: 188 GKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDC 247
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
+V V A +LG + N FL + + +++ MYA+CG ++ A VF
Sbjct: 248 YAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRG 307
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M K+D++ WN+ ++G +G A LF +M+ S +P+ T + L+ ACT+ G G
Sbjct: 308 MRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEG 367
Query: 332 RKFHGYIINSNMKI-----DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
R++ NS ++ + ++D+ + G LD A + + P E N W L
Sbjct: 368 RQY----FNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSM-PMEANAIVWGAL 422
Query: 387 IAGYGMHGHGRKALEFFSQM--LEEGVKPDHITFTSILSA 424
+ G +H + Q+ LE +++ ++I SA
Sbjct: 423 LGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSA 462
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/658 (34%), Positives = 357/658 (54%), Gaps = 45/658 (6%)
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVL 117
+ AR++F+ + Y L+ MI YA N L+L+ M + +S NS ++
Sbjct: 28 DEARTVFDKVSFPDVY--LYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNS-----MI 80
Query: 118 KACASNSLIL----------EGKVVHGDIIRTGFLSDSYVQAA----------------- 150
K C + + E VV + GFL ++ A
Sbjct: 81 KGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNS 140
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL--L 208
++ Y G+ +DG ++F EM R+++SWT MI +Q + EEAL LF++ G+
Sbjct: 141 MIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVK 200
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
S T V +A + + +H + + D I +++ YA C +E + V
Sbjct: 201 PTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRV 260
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F +++ W +++TGY N + +AL +F EM PN + +++C L +
Sbjct: 261 FHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEAL 320
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIA 388
GR+ H + ++ D + N+++ MY +CG+L+ +F I S++N+ SWN +I
Sbjct: 321 DWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRI--SKKNIVSWNSVIV 378
Query: 389 GYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVK 447
G HG G AL FF+QM+ V+PD ITFT +LSACSH+G+ +GR F ++ S +
Sbjct: 379 GCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAE 438
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANY 502
++ HYACMVD+LGR+G L EA ++I+ MP+ N VW LL AC +H E AA
Sbjct: 439 VKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKC 498
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
+ LEP + +VL+SN+YA++++W +V ++R +MK +G+ K S I F +
Sbjct: 499 IIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLS 558
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
DR +P +Y+K+E + ++K GY+PD ALHDVEDE +E ML+YHSE+LA+ FG+
Sbjct: 559 GDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGL 618
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ + + V KNLRVC DCHSA + I+ I RRKIIVRD+ RFHHF G CSC DYW
Sbjct: 619 ISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 188/389 (48%), Gaps = 32/389 (8%)
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G+ T F + SY Q+ + D + + + D+ VFD++S D+ +T+MIT Y + + +
Sbjct: 2 GNANYTKFCTFSY-QSMITD-HLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFD 59
Query: 194 EALILFQKTQQEGLLSDSVTI-----VSVASAVGQLGDVLKAQAVHGY-AICNAFLE--- 244
AL LF + + ++S + I + + +L D + ++V + + N FL+
Sbjct: 60 HALQLFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGK 119
Query: 245 --------------DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
D+ NS++ Y G VE +F M R++ISW SM+ G Q+
Sbjct: 120 IEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQH 179
Query: 291 GQASEALLLFDEMQNS--DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
G++ EAL LF +M + KP T +++AC + G + H ++ DA
Sbjct: 180 GRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAY 239
Query: 349 LRNAVMDMYAKCGDLDTAENMFN-DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ A++ YA C ++ + +F+ +H NV W L+ GYG++ AL+ F +M+
Sbjct: 240 ISAALITFYANCKQMEDSLRVFHGKLH---MNVVIWTALVTGYGLNCKHEDALKVFGEMM 296
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY 467
EGV P+ +FTS L++C +D GR+ KL ++ +V ++ M R G L
Sbjct: 297 REGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLN 356
Query: 468 EAFDMIKQMPLPPNDSVWGALLLACRIHG 496
+ + K++ N W ++++ C HG
Sbjct: 357 DGVVIFKRIS-KKNIVSWNSVIVGCAQHG 384
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/572 (37%), Positives = 337/572 (58%), Gaps = 16/572 (2%)
Query: 123 NSLILEG------KVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+S+IL G + +H II TG + S + L YA ++F + D
Sbjct: 23 HSIILAGPRLKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPD 82
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+ +IT + P+E+L+ +++ + S + T +V + L + +H
Sbjct: 83 TFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHC 142
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + D +Q ++V+ YA+ G+V AR VFD M ++ +++WNSM++GY QNG E
Sbjct: 143 HVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKE 202
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
A+ LF MQ+ KP+ T + L+SAC +G+ LG H YI + ++ L A+M+
Sbjct: 203 AVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMN 262
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY++CG++ A +F+ + E+N+ +W +I+GYGMHGHG +A+E F++M +G +P++
Sbjct: 263 MYSRCGNVSKAREVFDSM--EEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNN 320
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+TF ++LSAC+HAGL+DEGR+ F M + + P V+H CMVDMLGRAG L EA+ IK
Sbjct: 321 VTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIK 380
Query: 475 QM-PLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWR 528
P P +VW A+L AC++H G A +L +EPE+ G++V++SNIYA + +
Sbjct: 381 NTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMD 440
Query: 529 EVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAG 588
V K+R M LKK +S I+ + F D+ +P ++Y ++ + + AG
Sbjct: 441 RVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAG 500
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y+P +H+VE+E+RE+ L YHSEKLA+AFG++ +++ KNLR+C DCH+A +
Sbjct: 501 YIPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIK 560
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+IS I R+I VRD RFHHF+ G+CSC DYW
Sbjct: 561 YISIIANREINVRDRLRFHHFKDGSCSCQDYW 592
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 229/454 (50%), Gaps = 16/454 (3%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y ++ + L L+QIH+ + +GL + + Y + R LF SI
Sbjct: 22 YHSIILAGPRLKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSI--P 79
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
K +FL++++I + E+L Y M + ISS++YTF V+K+ A + G+
Sbjct: 80 KPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGET 139
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H + G+ D+YVQAALV YAK G KVFD+M + +V+W MI+ YEQ
Sbjct: 140 IHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGF 199
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
+EA+ LF Q G+ DS T VS+ SA Q+G + VH Y N F ++ + +
Sbjct: 200 GKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTA 259
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY+RCGNV KAR VFD ME++++++W +M++GY +G S+A+ LF+EM +PN
Sbjct: 260 LMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPN 319
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV------MDMYAKCGDLDT 365
VT + ++SAC + G GR+ I + MK + L +V +DM + G L+
Sbjct: 320 NVTFVAVLSACAHAGLVDEGRQ-----IFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNE 374
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSA 424
A + P E + W ++ MH + +E +L E P H S + A
Sbjct: 375 AYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYA 434
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
AG +D K M + +K EV + VD
Sbjct: 435 L--AGRMDRVEKIRNIMIRNRLKKEVGYSTIDVD 466
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/612 (36%), Positives = 340/612 (55%), Gaps = 56/612 (9%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK--VFDEMSV 173
VL C I + K VH I R G +V A L+ K D VF ++
Sbjct: 45 VLHGCTH---INQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEY 101
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
+ WT +I Y E+++L+ +++G+ S T ++ A DV + V
Sbjct: 102 PNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQV 161
Query: 234 HGYAI-CNAFLEDLCIQNSIVAMYARCG-------------------------------N 261
H I F DL + N+++ MY +CG N
Sbjct: 162 HTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGN 221
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+E A +FD + +D+++W +M+TGY QN + EAL +F+ MQ + K + VT + ++SA
Sbjct: 222 MEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISA 281
Query: 322 CTYLGSRQLGR------KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
C LG+ + + G+ SN+ + + A++DMYAKCG ++ A +F +
Sbjct: 282 CAQLGAAKYANWVRDVAEQSGFGPTSNVVVGS----ALIDMYAKCGSVEDAYKVFERME- 336
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
ERNV S++ +I G+ MHG A+E F +ML+ +KP+ +TF +L+ACSHAG++++G+
Sbjct: 337 -ERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQ 395
Query: 436 KCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ FA M + V P HYACMVD+LGRAG L EA +++K MP+ P+ VWGALL ACRI
Sbjct: 396 QLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRI 455
Query: 495 HG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
HG +IAA++LF+LEP G ++L+SNIYA++ +W +V K+R+ M+ KGLKK S
Sbjct: 456 HGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCS 515
Query: 550 VIEYGKDI-QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
+E K I F D +P +E+ + +E + +K GY P+LS +D+ DE+++ +
Sbjct: 516 WVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRL 575
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
L HSEKLA+AFG++ +++ KNLR+C DCHS S I R+I+VRD RFHH
Sbjct: 576 LMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHH 635
Query: 669 FEGGTCSCNDYW 680
F G CSC ++W
Sbjct: 636 FRDGRCSCGNFW 647
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 229/446 (51%), Gaps = 43/446 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP--NTARSLFNSIHNDK 72
+L C + ++Q+H+ + GL Q + AK++ T P R +F + +
Sbjct: 45 VLHGCTHINQVKQVHAHIFRKGL-EQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQV--EY 101
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVV 132
FLW +IR YA G +E++ LY++MRR GI S+TF +LKAC++ + G+ V
Sbjct: 102 PNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQV 161
Query: 133 HGD-IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM-------------------- 171
H I+ GF SD YV L+DMY KCG G +VFDEM
Sbjct: 162 HTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGN 221
Query: 172 -----------SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
++D+V+WT M+T Y Q +P EAL +F++ Q G+ +D VT+V V SA
Sbjct: 222 MEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISA 281
Query: 221 VGQLGDVLKAQAVHGYAICNAF--LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
QLG A V A + F ++ + ++++ MYA+CG+VE A VF+ ME+R++
Sbjct: 282 CAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVY 341
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
S++SM+ G+ +G A A+ LFDEM ++ KPN VT + +++AC++ G + G++ +
Sbjct: 342 SYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMM 401
Query: 339 INSNMKIDATLRNAVM-DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ + A M D+ + G L+ A N+ + P + W L+ +HG+
Sbjct: 402 EECHGVAPSEDHYACMVDLLGRAGRLEEALNLVK-MMPMNPHGGVWGALLGACRIHGNPD 460
Query: 398 KALEFFSQMLEEGVKPDHITFTSILS 423
A S + E ++P+ I +LS
Sbjct: 461 MAQIAASHLFE--LEPNGIGNYILLS 484
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/607 (37%), Positives = 322/607 (53%), Gaps = 44/607 (7%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC-GQTDDGCKVFDEMSV 173
F+L +C S I K VH +I TG + L+ + VFD
Sbjct: 6 FLLSSCKSFRQI---KQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQ 62
Query: 174 RDLVSWTVMIT--AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
DL + +I A+ + ++E L+ + + G VL+ +
Sbjct: 63 PDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGE 122
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
V +AI +L + N+++ MY V AR VFD RD+ SWN ML+GY + G
Sbjct: 123 QVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLG 182
Query: 292 QASEALLLFDEMQNSDC-------------------------------KPNPVTALILVS 320
+ EA LFDEM D PN T ++
Sbjct: 183 KMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLA 242
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
AC L + GR H YI +N++++ L ++DMYAKCG+L+ A +FN +R V
Sbjct: 243 ACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKV 302
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
WN +I G+ +HG ++A+E F QM E V P+ +TF ++L+ACSH ++EGR F
Sbjct: 303 WPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFES 362
Query: 441 M-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH---- 495
M + VKPE++HY C+VD+LGRAG L EA ++I M L P+ ++WGALL AC+IH
Sbjct: 363 MASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAE 422
Query: 496 -GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYG 554
GE + +L+P H G VL++NIY+ + W E LRE + G KK S IE
Sbjct: 423 MGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELN 482
Query: 555 KDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED-EDREHMLNYHS 613
F DR +P K++Y ++ M ++K+AGY+P+ L D++D EDRE L HS
Sbjct: 483 GMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNEDRETALLKHS 542
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLA+AFG+MN TP+ +++ KNLRVC+DCH A +FIS +Y R+IIVRD R+HHF+ GT
Sbjct: 543 EKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHHFKDGT 602
Query: 674 CSCNDYW 680
CSCNDYW
Sbjct: 603 CSCNDYW 609
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 209/441 (47%), Gaps = 43/441 (9%)
Query: 13 DQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
D LL SC ++Q+H+ L T+GLI + + + + + A +F+ H +
Sbjct: 5 DFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFD--HFPQ 62
Query: 73 SYSFLWNTMIR--AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
FL+NT+I+ A++ + S +R + N Y+F F K C S +LEG+
Sbjct: 63 PDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGE 122
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA- 189
V I+ G ++ +V AL+ MY D KVFD RD+ SW +M++ Y +
Sbjct: 123 QVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLG 182
Query: 190 ----------EKPE--------------------EALILFQKTQQEGLLSDSVTIVSVAS 219
E PE EAL +F +G+ + T+ S +
Sbjct: 183 KMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLA 242
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME--KRDL 277
A L + + + +H Y N + + ++ MYA+CG +E A +F+ KR +
Sbjct: 243 ACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKV 302
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
WN+M+ G+ +G++ EA+ +F++M+ PN VT + L++AC++ G+R +++
Sbjct: 303 WPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSH-GNRVEEGRYYFE 361
Query: 338 IINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ S+ ++ L + ++D+ + G L AE + + +H + +V+ W L++ +H
Sbjct: 362 SMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTP-DVAIWGALLSACKIHKD 420
Query: 396 GRKALEFFSQMLEEGVKPDHI 416
E ++++E + P+H+
Sbjct: 421 AEMG-ERVGKIVKE-LDPNHL 439
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/590 (34%), Positives = 338/590 (57%), Gaps = 18/590 (3%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ LL+ C + L+QIH+ L T+ ++H + K + A F++I +
Sbjct: 35 FNSLLQQCLSIKQLKQIHAQLLTN-----SIHKPNSFLYKIADLKDFAYASVFFSNILDP 89
Query: 72 KSYSFLWNTMIRAYANN-GHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
YSF N MIR + LE YS M+ G+ N+ T+PF+ AC++ + G+
Sbjct: 90 TEYSF--NVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGR 147
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+ H +IR G D +V +L+ MYA+CG+ D KVFDE+S +DLVSW MI+ Y +
Sbjct: 148 MGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMR 207
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EA+ LF++ + G + +++VSV A G+LGD+ V + + N + + +
Sbjct: 208 HAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGS 267
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ MY +CG++ AR +FD M+K+D ++WN+M+TGY QNG + EA+ LF +M+ S P
Sbjct: 268 ALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAP 327
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ +T + ++SAC +G+ LG++ Y + D + A++DMYAKCG LD A +F
Sbjct: 328 DQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVF 387
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG--VKPDHITFTSILSACSHA 428
+ ++N SWN +I+ HG ++AL F M+ EG V P+ ITF +LSAC HA
Sbjct: 388 YGM--PKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHA 445
Query: 429 GLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+DEGR+ F M + + P+++HY+CMVD+ RAG L EA+D + MP P++ + GA
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGA 505
Query: 488 LLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL AC+ I L +LEP ++G +V+ S +YA +W + ++R MK KG+
Sbjct: 506 LLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
K S I+ + FH D ++ W E+++ ++ + +++ GY+P+
Sbjct: 566 SKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPN 615
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 237/727 (32%), Positives = 359/727 (49%), Gaps = 71/727 (9%)
Query: 4 LGPSTEGFYD--QLLKSCNFLASLRQIHSS-----LTTSGLINQALHLGAKIIIKYTTYG 56
L P T F+ +LL A+ + IH + +S +I + LH ++ T
Sbjct: 29 LSPQTFIFHSSARLLPEAGACAAKKAIHRQSVRGCVPSSSVIARGLHNAHRVFDGTPTRS 88
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM--RRSGISSNSYTFP 114
P W ++I A G + + ++ M + N++
Sbjct: 89 LPA------------------WTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLA 130
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG-------------QT 161
VL+ CA + G+ +HG I+R+G D + A++DMYAKCG Q
Sbjct: 131 GVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQK 190
Query: 162 D-------------DG-----CKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D DG ++FDE S+RD+ SW +++ + EAL Q+
Sbjct: 191 DATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMV 250
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+ G+ + T V + G L + +HG + ED + S++ MY +CG +E
Sbjct: 251 RAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEME 310
Query: 264 KARLVFD----MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
A +FD E R +W++M+ GY+QNG+ EAL F M +
Sbjct: 311 SALSIFDRWSDFTEDRQF-AWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVA 369
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
SAC G + GR+ HG++ + DA L +A++DMY+K G L+ A +F +N
Sbjct: 370 SACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQT--KN 427
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
V+ W ++ Y HG GR ALE FS+M E + P+ IT ++LSACSH+GL+ +G F
Sbjct: 428 VALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFN 487
Query: 440 DMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH--- 495
M + + P +HY CMVD+ GRAG L +A + I++ + VW LL ACR+H
Sbjct: 488 LMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHI 547
Query: 496 --GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
++A+ L QLE G +VLMSN+YA +NKW + KLR MK + ++K S I
Sbjct: 548 EYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHL 607
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F D +P E+Y +E + +K GY +HD+E+E RE L +HS
Sbjct: 608 KNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHS 667
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLA+AFGI++ +++ KNLRVC DCH A +FI+ R+I+VRD RFHHF+ G
Sbjct: 668 EKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQ 727
Query: 674 CSCNDYW 680
CSC D+W
Sbjct: 728 CSCEDFW 734
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/590 (34%), Positives = 337/590 (57%), Gaps = 18/590 (3%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
++ LL+ C + L+QIH+ L T+ ++H + K + A F++I +
Sbjct: 35 FNSLLQQCLSIKQLKQIHAQLLTN-----SIHKPNSFLYKIADLKDFAYASVFFSNILDP 89
Query: 72 KSYSFLWNTMIRAYANN-GHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
YSF N MIR + LE YS M+ G+ N+ T+PF+ AC++ + G+
Sbjct: 90 TEYSF--NVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGR 147
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+ H +IR G D +V +L+ MYA+CG+ D KVFDE+S +DLVSW MI+ Y +
Sbjct: 148 MGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMR 207
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EA+ LF++ + G + +++VSV A G+LGD+ V + + N + + +
Sbjct: 208 HAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGS 267
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ MY +CG++ AR +FD M+K+D ++WN+M+TGY QNG + EA+ LF +M+ S P
Sbjct: 268 ALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAP 327
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ +T + ++SAC +G+ LG++ Y + D + A++DMYAKCG LD A +F
Sbjct: 328 DQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVF 387
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG--VKPDHITFTSILSACSHA 428
+ +N SWN +I+ HG ++AL F M+ EG V P+ ITF +LSAC HA
Sbjct: 388 YGM--PNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHA 445
Query: 429 GLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+DEGR+ F M + + P+++HY+CMVD+ RAG L EA+D + MP P++ + GA
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGA 505
Query: 488 LLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL AC+ I L +LEP ++G +V+ S +YA +W + ++R MK KG+
Sbjct: 506 LLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
K S I+ + FH D ++ W E+++ ++ + +++ GY+P+
Sbjct: 566 SKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPN 615
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/605 (35%), Positives = 334/605 (55%), Gaps = 34/605 (5%)
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
NGH ET +L S+ + C ++ L K H I+RTG L DSY+
Sbjct: 42 NGHSTETSKL----------SHKAILHLLNTQCTTSLHHL--KQAHALILRTGHLQDSYI 89
Query: 148 QAALVDMYAKCGQT-----DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
+LV YA + +VFD + ++ W MI + +P +A++L+ +
Sbjct: 90 AGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEM 149
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
+ T +V A G V + VH + + + D I +S + MYA G +
Sbjct: 150 MVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRL 209
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
+AR + D +K + M + G EAL +F +MQ +P ++SAC
Sbjct: 210 VEARRILD--DKGGEVDAVCMPD---RKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 264
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
LG+ GR H Y +++++D L +++DMYAKCG +D A +F + S + VSS
Sbjct: 265 ANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKM--SNKEVSS 322
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
WN +I G MHG A++ FS+M + P+ ITF +L+AC+H GL+ +G F M
Sbjct: 323 WNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMR 379
Query: 443 K-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--- 498
K V+P+++HY C+VD+LGRAG L EA ++ +P P +VWGALL ACR HG +
Sbjct: 380 KEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELG 439
Query: 499 --AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK- 555
L +LEP+++G + L+SNIYA + +W EVG++R+ MK +G+K S+I+ G+
Sbjct: 440 ERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRG 499
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
++ F D +P K++Y+ ++ + ++M GY PD S L D+++E++E + HSEK
Sbjct: 500 EVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEK 559
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+ FG++N +P +++ KNLRVC DCHSA + IS +Y R+IIVRD R+HHF G CS
Sbjct: 560 LAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACS 619
Query: 676 CNDYW 680
C D+W
Sbjct: 620 CKDFW 624
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 187/386 (48%), Gaps = 32/386 (8%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL--------FNSIHNDKS 73
L L+Q H+ + +G + + G+ + +Y +T R L F+ + K
Sbjct: 68 LHHLKQAHALILRTGHLQDSYIAGSLV----KSYANVSTNRYLSFESSLRVFDFVR--KP 121
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
FLWN MI+ N + + LY M + N YT+P VLKAC+ ++ EG VH
Sbjct: 122 NVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVH 181
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
+++ G D ++ ++ + MYA G+ + ++ D D + ++
Sbjct: 182 AHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILD-----DKGGEVDAVCMPDRKGCFM 236
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
EAL +F + Q+E + + SV SA LG + + + +H YA N+ D + S+V
Sbjct: 237 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 296
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
MYA+CG ++ A VF+ M +++ SWN+M+ G +G+A +A+ LF +M D PN +
Sbjct: 297 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEI 353
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMK---IDATLRN--AVMDMYAKCGDLDTAEN 368
T + +++AC + G Q G I NS K ++ + + ++D+ + G L AE
Sbjct: 354 TFVGVLNACAHGGLVQKGLT----IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 409
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHG 394
+ + I P+E + W L+ HG
Sbjct: 410 VVSSI-PTEPTPAVWGALLGACRKHG 434
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/611 (36%), Positives = 354/611 (57%), Gaps = 16/611 (2%)
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL--ILEGKVVHGDIIRTGF 141
A+++NG E L + M +SG + TF +L A A I +G+ +H +G
Sbjct: 3 AFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL 62
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
L + V A++ MY KCG+ DD F+E+ ++ V+W M+T Y+ + EAL LF++
Sbjct: 63 LPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFRE 122
Query: 202 --TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA--FLEDLCIQNSIVAMYA 257
+ D + A L D+ + + +H +D+ + +++ MY+
Sbjct: 123 MCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYS 182
Query: 258 RCGNVEKARLVFD-MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS-DCKPNPVTA 315
+CG++E+AR VFD + D + WN+M+ Y Q+G+ +AL L+ M ++ D P T
Sbjct: 183 KCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTF 242
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ ++ C L + + GR H + +N + + NA++ MY KCG LD A ++F+ +
Sbjct: 243 VTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM-- 300
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
++ SWN +I+ Y HGH +AL + +M +GVKP +TF +LSACSH GL+ +G
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
F M +KP V H+ C++D+LGR G L EA ++K MP+ N W +LL AC+
Sbjct: 361 DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKT 420
Query: 495 HGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
HG++ AA+ + P +G +VL+SNIYAA+ +W++V K+R+ M +G+KK S
Sbjct: 421 HGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKS 480
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE G + F + DR +P +E+Y ++ M E+K GY+PD S HD+E+E++E +L
Sbjct: 481 WIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLL 540
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+ +G M + ++++++ KNLRVC DCH+A +F+S I RKI+VRDA RFH F
Sbjct: 541 VCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLF 600
Query: 670 EGGTCSCNDYW 680
E G+CSC DYW
Sbjct: 601 ENGSCSCRDYW 611
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 211/426 (49%), Gaps = 19/426 (4%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH SGL+ + +G +I Y G + AR+ F + S + WN M+ Y
Sbjct: 51 REIHRYARISGLLPNVV-VGTAVISMYGKCGRLDDARAAFEELQWKNSVT--WNAMMTNY 107
Query: 86 ANNGHCVETLELYSTM--RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG--F 141
+G E LEL+ M R + ++F ++AC++ + +G+ +H + R G
Sbjct: 108 KLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKEL 167
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR---DLVSWTVMITAYEQAEKPEEALIL 198
D V AL++MY+KCG ++ KVFD S+R D V W MI AY Q + ++AL L
Sbjct: 168 HKDVVVGTALLNMYSKCGDLEEARKVFD--SIRHDADSVCWNAMIAAYAQHGRGKQALDL 225
Query: 199 FQKTQQ-EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
++ L T V+V +L + + +A+H F +L + N++V MY
Sbjct: 226 YRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYG 285
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG +++A VF M+ +D ISWN++++ Y +G + +ALLL+ EM KP VT +
Sbjct: 286 KCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVG 345
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHP 375
L+SAC++ G G + Y + + +I ++ + ++D+ + G L AE + + P
Sbjct: 346 LLSACSHGGLVADGLDYF-YRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSM-P 403
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE--GVKPDHITFTSILSACSHAGLIDE 433
+ N W L+ HG ++ + Q+++ ++ ++I +A +++
Sbjct: 404 IQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEK 463
Query: 434 GRKCFA 439
RK A
Sbjct: 464 IRKIMA 469
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 147/300 (49%), Gaps = 18/300 (6%)
Query: 16 LKSCNFLASL---RQIHSSLTTSGL-INQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+++C+ L L R+IH L G +++ + +G ++ Y+ G+ AR +F+SI +D
Sbjct: 141 IEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHD 200
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGK 130
S WN MI AYA +G + L+LY +M + ++ TF V+ CA S + +G+
Sbjct: 201 AD-SVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGR 259
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+H + T F ++ V ALV MY KCG D+ VF M ++D +SW +I++Y
Sbjct: 260 AIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHG 319
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
++AL+L+Q+ +G+ VT V + SA G V G +D I+
Sbjct: 320 HSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLV-----ADGLDYFYRMQDDHRIKP 374
Query: 251 S------IVAMYARCGNVEKARLVFDMME-KRDLISWNSMLTGYIQNGQASEALLLFDEM 303
S I+ + R G + +A LV M + + + W S+L +G + D++
Sbjct: 375 SVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQV 434
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 8/220 (3%)
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL--GRKFHGYIINS 341
+ + NG SEAL+ F M S +P+ VT ++++A +G+ + GR+ H Y S
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + + AV+ MY KCG LD A F ++ +N +WN ++ Y + G R+ALE
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQ--WKNSVTWNAMMTNYKLDGRDREALE 118
Query: 402 FFSQMLE--EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK--LSVKPEVKHYACMV 457
F +M E +PD +F+ + ACS+ +++GR+ + + + +V ++
Sbjct: 119 LFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALL 178
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+M + G L EA + + + W A++ A HG
Sbjct: 179 NMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGR 218
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
L P +G + ++ C L++L+Q IH+ + + + L + ++ Y G +
Sbjct: 235 LAPK-QGTFVTVIDVCAELSALKQGRAIHARVRATNF-DANLLVSNALVHMYGKCGCLDE 292
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +F+S+ S WNT+I +YA +GH + L LY M G+ TF +L AC
Sbjct: 293 ALDVFHSMKLKDEIS--WNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSAC 350
Query: 121 ASNSLILEG 129
+ L+ +G
Sbjct: 351 SHGGLVADG 359
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/505 (39%), Positives = 302/505 (59%), Gaps = 8/505 (1%)
Query: 182 MITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA 241
M+ Y ++AL LF + G SD +T+ + A A G L + + + +H +AI
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 242 FLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
F DL + + I+ MY +CG++ A +VF+ + D ++W SM++G + NG +AL ++
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
M+ S P+ T L+ A + + + + GR+ H +I + D + +++DMYAKCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
+++ A +F ++ RN++ WN ++ G HG+ +A+ F M G++PD ++F I
Sbjct: 181 NIEDAYRLFKKMNV--RNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGI 238
Query: 422 LSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
LSACSHAGL E + M ++PE++HY+C+VD LGRAG + EA +I+ MP
Sbjct: 239 LSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 298
Query: 481 NDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ S+ ALL ACRI G++ A LF LEP + +VL+SNIYAA+N+W +V R+
Sbjct: 299 SASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARK 358
Query: 536 DMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSC 595
MK K +KK FS I+ + F DR +P +Y KVE M I+ GY+PD
Sbjct: 359 MMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEF 418
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
L DVEDE++E L YHSEKLA+A+G+++ ++V KNLRVC DCH+A ++IS ++
Sbjct: 419 VLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFE 478
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R+I++RDANRFHHF G CSC DYW
Sbjct: 479 REIVLRDANRFHHFRDGVCSCGDYW 503
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 131/234 (55%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
+ LEL+S + +SG S+ T KAC L+ +GK +H I+ GF SD +V + ++
Sbjct: 13 KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGIL 72
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSV 212
DMY KCG + VF+ +S D V+WT MI+ ++AL ++ + +Q ++ D
Sbjct: 73 DMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEY 132
Query: 213 TIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMM 272
T ++ A + + + + +H I + D + S+V MYA+CGN+E A +F M
Sbjct: 133 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 192
Query: 273 EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
R++ WN+ML G Q+G A EA+ LF M++ +P+ V+ + ++SAC++ G
Sbjct: 193 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 246
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 140/279 (50%), Gaps = 17/279 (6%)
Query: 17 KSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
K+C L L +QIH+ +G + LH+ + I+ Y G+ A +FN I
Sbjct: 38 KACGCLVLLDQGKQIHAHAIKAGF-DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD 96
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ W +MI +NG+ + L +Y MR+S + + YTF ++KA + + + +G+ +H
Sbjct: 97 VA--WTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLH 154
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
++I+ +SD +V +LVDMYAKCG +D ++F +M+VR++ W M+ Q E
Sbjct: 155 ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAE 214
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI- 252
EA+ LF+ + G+ D V+ + + SA G L ++A Y ++ D I+ I
Sbjct: 215 EAVNLFKSMKSHGIEPDRVSFIGILSACSHAG--LTSEA---YEYLHSMPNDYGIEPEIE 269
Query: 253 -----VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
V R G V++A V + M + S N L G
Sbjct: 270 HYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 308
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 362/683 (53%), Gaps = 24/683 (3%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y L ++C L SL R IH L + + N + + ++ Y G + +F+ +
Sbjct: 90 YQCLFEACGKLRSLADGRLIHDRLRRT-VKNPSGSIENCLLRMYCDCGSCIDVQKVFDEM 148
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
S W +I AYA NG + + L+S M+ SGI NS + +L++C S +
Sbjct: 149 LMKNLVS--WVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLEL 206
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H +IR ++ V+ A+ +MY +CG + VFD M ++ V+WT ++ Y Q
Sbjct: 207 GKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQ 266
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
A+K E AL LF + EG+ D V L D + +H + + ++ +
Sbjct: 267 AKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSV 326
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
+V Y +CG++E A F + + + +SW+++++G+ Q+G+ + + +F +++
Sbjct: 327 GTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGV 386
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
N + AC + +G + HG I + +A++ MY+KCG LD A
Sbjct: 387 VLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARR 446
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
F I E + +W +I+GY HG+ +AL FF +M GV+P+ +TF ++L+ACSH+
Sbjct: 447 AFESI--DEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHS 504
Query: 429 GLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+ E ++ M++ VKP + HY CM+D RAG L EA ++I +MP P+ W +
Sbjct: 505 GLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKS 564
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL C H G+IAA LF+L+P T ++L+ N+Y+A KW E G +R+ M + L
Sbjct: 565 LLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAEREL 624
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE-----IKMAGYMPDLSCAL 597
KK + S I + F DR +P + +Y K+E +++ D+SC+L
Sbjct: 625 KKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSL 684
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
+E +L+ HSEKLA+AFG+++ A + V KNLR C DCH + +S + R+
Sbjct: 685 ----SARKEQLLD-HSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQ 739
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I+VRD+ RFHHF+ G CSCNDYW
Sbjct: 740 IVVRDSTRFHHFKSGKCSCNDYW 762
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 207/426 (48%), Gaps = 9/426 (2%)
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
L N + + + G E + M + +S +++ + +AC + +G+++H +
Sbjct: 54 LENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRL 113
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
RT ++ L+ MY CG D KVFDEM +++LVSW ++I+AY + + E+A+
Sbjct: 114 RRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAI 173
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF Q G+ +S +S+ + + + +H + I ++ ++ +I MY
Sbjct: 174 RLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMY 233
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
RCG +E A+LVFD M+ ++ ++W ++ GY Q + AL LF M + +
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
I++ C L +GR+ H +I+ + + ++ ++D Y KCGD+++A F I S
Sbjct: 294 IVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRI--S 351
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
E N SW+ LI+G+ G ++ F+ + EGV + +TS+ AC+ ++ G +
Sbjct: 352 EPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQ 411
Query: 437 CFADMTKLSVKPEVKHYACMVDMLGRAGCL---YEAFDMIKQMPLPPNDSVWGALLLACR 493
D K + + + MV M + G L AF+ I + P+ W A++
Sbjct: 412 AHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDE----PDAVAWTAIISGYA 467
Query: 494 IHGEIA 499
HG A
Sbjct: 468 YHGNAA 473
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/592 (34%), Positives = 332/592 (56%), Gaps = 29/592 (4%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
F +L+ C N+ I ++ IIR D +V L+ + + K+F
Sbjct: 35 FISLLQNCKHNNQI---PPIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQ 91
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
++ +T +I + + + L+ + L+ DS + SV A G + + +
Sbjct: 92 NPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGRE 151
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS------------- 279
VH + + I+ ++ +Y +CG E AR VFD M +RD+++
Sbjct: 152 VHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGI 211
Query: 280 -----WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
W +M+ G ++NG+++ AL +F MQ D PN VT + ++SAC+ LG+ QLGR
Sbjct: 212 KDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWV 271
Query: 335 HGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
Y+ ++++ + A+++MY++CGD+D A+ +F + E+NV ++N +I G+ +HG
Sbjct: 272 RSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQM--KEKNVITYNSMIMGFALHG 329
Query: 395 HGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHY 453
+A+E F ++++G P +TF +L+ACSH GL + G + F M K ++P+++HY
Sbjct: 330 KSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHY 389
Query: 454 ACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEP 508
CMVD+LGR G L EA+ I+ M + P+ + GALL AC+IHG E A L +
Sbjct: 390 GCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKN 449
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
+G ++L+SN Y++S KW+E ++R +M+ +G++K S IE +I F D +P
Sbjct: 450 ADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHP 509
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
+++YKK+E + +++ GY P LHD+E ++E L HSE+LA+ +G+++ P
Sbjct: 510 QKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGLISTKPL 569
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLRVCNDCH + IS I RRKI+VRD NRFHHFE G CSC DYW
Sbjct: 570 TTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRDRNRFHHFENGVCSCGDYW 621
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 189/388 (48%), Gaps = 57/388 (14%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +F+ N Y L+ +I + + + + LY M S + +SY VLKAC
Sbjct: 83 ASKIFSHTQNPNVY--LYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKAC 140
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS-- 178
+ + EG+ VH +++ G S+ ++ L+++Y KCG +D +VFDEM RD+V+
Sbjct: 141 GCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVAST 200
Query: 179 ----------------WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
WT MI + + AL +F+ Q+E ++ + VTIV V SA
Sbjct: 201 VMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACS 260
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
+LG + + V Y + + + +++ MY+RCG++++A+ VF+ M+++++I++NS
Sbjct: 261 ELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNS 320
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINS 341
M+ G+ +G++ EA+ LF + P+ VT + +++AC++ G +LG + FH +
Sbjct: 321 MIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDY 380
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
++ ++D+ + G L+ A +
Sbjct: 381 GIEPQIEHYGCMVDLLGRLGRLEEAYS--------------------------------- 407
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAG 429
F +M++ V PDH+ ++LSAC G
Sbjct: 408 -FIRMMK--VAPDHVMLGALLSACKIHG 432
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 232/648 (35%), Positives = 360/648 (55%), Gaps = 21/648 (3%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
I+ Y + + AR LF+ N + + +NT+I YA+ V + L+ MR G
Sbjct: 80 IVKAYAKDSKIHIARQLFD--ENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFE 137
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T ++ AC ++ K +H + GF S S V A V Y+K G + V
Sbjct: 138 VDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 168 FDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
F M +RD VSW MI AY Q ++ +AL L+++ +G D T+ SV +A+ L
Sbjct: 196 FYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN---VEKARLVFDMMEKRDLISWNSM 283
++ + HG I F ++ + + ++ Y++CG + + VF + DL+ WN+M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTM 315
Query: 284 LTGYIQNGQASE-ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
++GY N + SE A+ F +MQ +P+ + + + SAC+ L S G++ HG I SN
Sbjct: 316 ISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSN 375
Query: 343 MKIDA-TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + ++ NA++ +Y K G+L A +F+ + E N S+N +I GY HGHG +AL
Sbjct: 376 IPSNRISVNNALISLYYKSGNLLDARRVFDRM--PELNAVSFNCMIKGYAQHGHGTEALR 433
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
+ +ML+ G+ P++ITF +ILSAC+H G +DEG+K F M + ++PE +HY+CM+D+L
Sbjct: 434 LYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GRAG L EA I MP P W ALL ACR H E AA L ++P +V
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYV 553
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
+++N+YA + KW E+ +R+ M+ K ++K S IE K F D +P +EV +
Sbjct: 554 MLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNE 613
Query: 576 KVESMAVEIKMAGYMPDLSCAL---HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+E M ++K GY+ D A+ + + + E L +HSEKLAVAFG+M+ +
Sbjct: 614 YLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIV 673
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLR+C DCH+A +F+S + R+IIVRD RFH F+ G CSC DYW
Sbjct: 674 VVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 125/297 (42%), Gaps = 36/297 (12%)
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME------------ 273
D+ +++H + + + N V +Y++CG + AR FD E
Sbjct: 23 DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVK 82
Query: 274 -------------------KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
+ D +S+N++++GY + A++LF M+ + + T
Sbjct: 83 AYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFT 142
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
L++AC L ++ H + ++ +++ NA + Y+K G L A ++F +
Sbjct: 143 LSGLIAACC--DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM- 199
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
R+ SWN +I YG H G KAL + +M+ +G K D T S+L+A + + G
Sbjct: 200 DGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 435 RKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK--QMPLPPNDSVWGALL 489
R+ + K + ++D + G D K Q L P+ +W ++
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMI 316
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/603 (34%), Positives = 330/603 (54%), Gaps = 46/603 (7%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L AC++ E +H ++R G SD V L YA G+ D +
Sbjct: 30 LLAACSTARRASE---LHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPT 86
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+ +T I A+ L L EGLL + T+ + A L +A+H
Sbjct: 87 TIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLS---LGRALHA 143
Query: 236 YAICNAFLEDLCIQNSIVAMY-------------------------------ARCGNVEK 264
YA A D + ++++MY A G ++
Sbjct: 144 YAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDD 203
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
AR +FD + ++D I WN+M+ GY Q+G+ +EAL LF M S +P+ VT ++++SA
Sbjct: 204 ARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQ 263
Query: 325 LGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
LG+ + G+ H Y+ NS ++++ + A++DMY KCG L+ A +F+ I +++ W
Sbjct: 264 LGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGI--GNKDIVVW 321
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT- 442
N +I GY MHG RKALE F Q+ ++G+ P ITF +L+ACSH+GL++EGR F M
Sbjct: 322 NAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEH 381
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GE 497
+ + P+++HY CMVD+LGRAG + EAF +++ + + P+ +W +LL ACR+H G+
Sbjct: 382 EYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQ 441
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
A++L ++G ++L+SNIYAA KW EV ++R MK G++K S IE + +
Sbjct: 442 RIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKV 501
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D +P E+Y ++ M +K G++P LHD+++ +E L HSEKLA
Sbjct: 502 YEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAVHSEKLA 561
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
VAFG+++ P + +++ KNLR C+DCH+ + IS I RKI+ RD NRFHHF G+C+C
Sbjct: 562 VAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVDGSCTCG 621
Query: 678 DYW 680
DYW
Sbjct: 622 DYW 624
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 192/417 (46%), Gaps = 48/417 (11%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
LL +C+ ++H+++ GL + + ++ Y G + + +L + +
Sbjct: 29 SLLAACSTARRASELHAAVVRKGL-DSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTT 87
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ + I A+++ G + L L S M G+ ++T L AC SL G+ +H
Sbjct: 88 --IFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLSL---GRALH 142
Query: 134 GDIIRTGFLSDSYVQAALVDMY-------------------------------AKCGQTD 162
+ DSYV AL+ MY A G D
Sbjct: 143 AYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALD 202
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
D ++FD + +D + W MI Y Q KP EAL LF++ + D VT+V V SAV
Sbjct: 203 DARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVA 262
Query: 223 QLGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
QLG V + +H Y + ++ ++ + ++V MY +CG++E A VF + +D++ WN
Sbjct: 263 QLGTVESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWN 322
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF-----HG 336
+M+ GY +G + +AL +F ++++ P +T + L++AC++ G + GR F H
Sbjct: 323 AMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHE 382
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
Y I+ ++ ++D+ + G ++ A ++ + + V W L+A +H
Sbjct: 383 YGIDPKIE----HYGCMVDLLGRAGLIEEAFHLVQSLTITPDAV-MWVSLLAACRLH 434
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/704 (32%), Positives = 360/704 (51%), Gaps = 102/704 (14%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y+ G+ LF + + S WNTMI Y G E L+L+ M SG+ +
Sbjct: 178 YSKCGKLKEVCQLFEKMTHRDVIS--WNTMISCYVLKGMYREALDLFDEMLVSGVLPDEI 235
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG------C 165
T ++ CA + GK +H I+ + LVDMY+KCG+ D+ C
Sbjct: 236 TMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRC 295
Query: 166 ---------------------------KVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
++FD+M+ R LVSWT M++ Y Q E+L L
Sbjct: 296 DESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLEL 355
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
FQ+ + E ++ D V +V+V SA L D ++VH + + L D + N+++ +YA+
Sbjct: 356 FQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAK 415
Query: 259 CGN-------------------------------VEKARLVFDMMEKRDLISWNSMLTGY 287
CG V+KAR F+ + ++D++SWN+M+ Y
Sbjct: 416 CGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAY 475
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDA 347
+++ +E+ +F +MQ+S+ KP+ T + L+S+C +G+ G + YI + + IDA
Sbjct: 476 VKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDA 535
Query: 348 TLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
L A++DMY KCG ++ A +F I E+NV W ++A Y M G +A++ + +M
Sbjct: 536 MLGTALIDMYGKCGCVEMAYEIFTQI--IEKNVFVWTAMMAAYAMEGQALEAIDLYLEME 593
Query: 408 EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCL 466
E GVKPDH+TF ++L+ACSH GL+DEG K F + ++ P + HY CMVD+LGR G L
Sbjct: 594 ERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHL 653
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIY 521
E I++MP+ P+ S+W +L+ ACR H E A L +++P + G VL+SNIY
Sbjct: 654 EETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIY 713
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A + +W +V K+R + G+ K F++IE + F ++ V+
Sbjct: 714 ADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNLVSA------------- 760
Query: 582 VEIKMAGYMPDLSCALHDVE-----DEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
D+ C L D+E ++ + HSE+LAVAFG++N + ++V +
Sbjct: 761 ----------DILCMLQDIERRLLVKQELSDTTSQHSERLAVAFGLINNQENSPIRVVNS 810
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+R+C DCHS + IS Y R+I++RD RFH F G CSC DYW
Sbjct: 811 VRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 277/575 (48%), Gaps = 77/575 (13%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LLKSC+ + IH+ L T+ LI+ + ++++ + + A + + H +S
Sbjct: 41 LLKSCSNIREFSPIHAHLITANLIHDP-EITSQVLAFLLSVNNLDCAHQILSYSHEPES- 98
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+WNT++ G E LE Y M G+ + TF F++ AC N + G VHG
Sbjct: 99 -IIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
I++ GF + + L+ +Y+KCG+ + C++F++M+ RD++SW MI+ Y E
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE 217
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
AL LF + G+L D +T+VS+ S +L D+ + +H Y + N + N +V
Sbjct: 218 ALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVD 277
Query: 255 MYARCG---------------------------------NVEKARLVFDMMEKRDLISWN 281
MY++CG ++KAR +FD M +R L+SW
Sbjct: 278 MYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWT 337
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M++GY+Q G E+L LF +M+ + P+ V + ++SAC +L LGR H +I+
Sbjct: 338 TMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTY 397
Query: 342 NMKIDATLRNAVMDMYAKCGDL-------------------------------DTAENMF 370
M +D L NA++D+YAKCG L D A + F
Sbjct: 398 GMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFF 457
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
N I E+++ SWN ++ Y H ++ E F +M VKPD T S+LS+C+ G
Sbjct: 458 NKI--PEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGA 515
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
++ G + K + + ++DM G+ GC+ A+++ Q+ + N VW A++
Sbjct: 516 LNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQI-IEKNVFVWTAMMA 574
Query: 491 ACRIHGEI--AANYLFQLE-----PEHTGYFVLMS 518
A + G+ A + ++E P+H + L++
Sbjct: 575 AYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLA 609
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 204/441 (46%), Gaps = 53/441 (12%)
Query: 44 LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRR 103
L ++ Y + + AR LF+ ++ S W TM+ Y G+ E+LEL+ MR
Sbjct: 304 LWTTLVSGYVKSNKIDKARQLFDKMNERSLVS--WTTMMSGYVQGGYYCESLELFQQMRF 361
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+ + VL AC G+ VH I+ G L D ++ AL+D+YAKCG+ D+
Sbjct: 362 ENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDE 421
Query: 164 GCKVFDEMSVR-------------------------------DLVSWTVMITAYEQAEKP 192
+ F+++ + D+VSW M+ AY + +
Sbjct: 422 ALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLF 481
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
E+ +F K Q + D T++S+ S+ ++G + V+ Y N D + ++
Sbjct: 482 NESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTAL 541
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ MY +CG VE A +F + ++++ W +M+ Y GQA EA+ L+ EM+ KP+
Sbjct: 542 IDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDH 601
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMF 370
VT + L++AC++ G G K+ + S I T+ + ++D+ + G L+ F
Sbjct: 602 VTFIALLAACSHGGLVDEGYKYFNK-LRSFYNIIPTIHHYGCMVDLLGRVGHLEETVK-F 659
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD----HITFTSILSACS 426
+ P E +VS W+ L+ H + A + F Q++E + P H+ ++I +
Sbjct: 660 IERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIE--IDPTNNGAHVLLSNIYA--- 714
Query: 427 HAGLIDEGRKCFADMTKLSVK 447
D GR + D++K+ K
Sbjct: 715 -----DAGR--WDDVSKVRTK 728
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/500 (36%), Positives = 317/500 (63%), Gaps = 10/500 (2%)
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+ P E ++Q+ +++GL +D V++ V ++ ++ + VH + + D +
Sbjct: 2 SSSPTEGFFMYQEMRKKGLRADPVSLSFVIRCYIRICSLIGGEQVHARILSDGHQSDSLL 61
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD- 307
+++ +Y+ C +A VFD M +RD I+WN +++ Y++N + + L++FD M + +
Sbjct: 62 LTNLMDLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGEL 121
Query: 308 -CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
C+P+ VT L+L+ AC LG+ + G K HG+I+ L N+++ MY++ G+LD A
Sbjct: 122 GCEPDDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKA 181
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F +H +NV +W+ +I+G M+G+GR+A+ F +ML+ GV PD +TFT +LSACS
Sbjct: 182 FGVFKGMH--NKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACS 239
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
+ GL+D+G FA M+K + P + HY CMVD+LGRAG L++A+ +I M + P+ ++W
Sbjct: 240 NCGLVDKGMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIW 299
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
LL ACRIH GE +L +L+ + G +VL+ N+Y++ + W++V +LR+ MK K
Sbjct: 300 RTLLGACRIHRNVILGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKEK 359
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G++ A S IE + F D +P E+Y+ ++ ++ ++K+AGY+ +++ L ++
Sbjct: 360 GIQTTPASSSIELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNL 419
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+ E++ ++L+YHSEKLA+AFG++ P +++ KNLR+C DCH+ + +S +Y R++I+
Sbjct: 420 DAEEKRYVLSYHSEKLAIAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVII 479
Query: 661 RDANRFHHFEGGTCSCNDYW 680
D RFHHF GG CSCNDYW
Sbjct: 480 TDHTRFHHFRGGHCSCNDYW 499
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 161/335 (48%), Gaps = 37/335 (11%)
Query: 93 ETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
E +Y MR+ G+ ++ + FV++ ++ G+ VH I+ G SDS + L+
Sbjct: 7 EGFFMYQEMRKKGLRADPVSLSFVIRCYIRICSLIGGEQVHARILSDGHQSDSLLLTNLM 66
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK--TQQEGLLSD 210
D+Y+ C + + CKVFDEM RD ++W V+I+ Y + + + L++F + + G D
Sbjct: 67 DLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGELGCEPD 126
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
VT + + A LG + + VHG+ + + + NS++AMY++ GN++KA VF
Sbjct: 127 DVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGVFK 186
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M +++++W+++++G NG EA+ F+EM P+ +T ++SAC+ G
Sbjct: 187 GMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNCG---- 242
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
+++ M I A + I P N+ + ++
Sbjct: 243 -------LVDKGMIIFARMSKEF------------------GIVP---NIHHYGCMVDLL 274
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
G G +A + M VKPD + ++L AC
Sbjct: 275 GRAGQLHQAYQLIMSMR---VKPDSTIWRTLLGAC 306
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
++ C+ + Q+H+ + + G + +L L ++ Y+ + + A +F+ + + +
Sbjct: 35 IRICSLIGG-EQVHARILSDGHQSDSLLL-TNLMDLYSLCDKGSEACKVFDEMRQRDTIA 92
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRS--GISSNSYTFPFVLKACASNSLILEGKVVH 133
WN +I Y N + L ++ M G + T +L+ACA+ + G+ VH
Sbjct: 93 --WNVLISCYMRNRRTRDVLVIFDGMLSGELGCEPDDVTCLLLLQACANLGALEFGEKVH 150
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G I+ G+ + + + +L+ MY++ G D VF M +++V+W+ +I+
Sbjct: 151 GHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGVFKGMHNKNVVTWSAIISGLAMNGYGR 210
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN-AFLEDLCIQNSI 252
EA+ F++ + G+L D +T V SA G V K + + ++ +
Sbjct: 211 EAIGAFEEMLKMGVLPDDLTFTGVLSACSNCGLVDKGMIIFARMSKEFGIVPNIHHYGCM 270
Query: 253 VAMYARCGNVEKA-RLVFDMMEKRDLISWNSML 284
V + R G + +A +L+ M K D W ++L
Sbjct: 271 VDLLGRAGQLHQAYQLIMSMRVKPDSTIWRTLL 303
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/627 (35%), Positives = 346/627 (55%), Gaps = 46/627 (7%)
Query: 95 LELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
+ Y+T + S + ++ +C S I K H +I T +S L+ +
Sbjct: 1 MRFYTTSAKPFHSDHYSRLVSLIDSCKSMQQI---KQTHAQLITTALISHPVSANKLLKL 57
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP-EEALILFQK-TQQEGLLSDSV 212
A C K+FD++ DL + MI A+ + +LI+F+ TQ GL +
Sbjct: 58 -AACASLSYAHKLFDQIPQPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRY 116
Query: 213 TIVSVASAVG-----QLGDVLKAQAV-----HGYAICNAFL------------------- 243
+ V SA G Q G+ ++ AV + + NA +
Sbjct: 117 SFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWA 176
Query: 244 --EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
DL N+++A Y GN+ A+ +FD M +RD++SW++++ GY+Q G EAL F
Sbjct: 177 VDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFH 236
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
+M KPN T + ++AC+ L + G+ H YI +K++ L +++DMYAKCG
Sbjct: 237 KMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCG 296
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
++++A +F + H ++ V WN +I G+ MHG +A+ F QM E + P+ +TF ++
Sbjct: 297 EIESASRVFFE-HKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIAL 355
Query: 422 LSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
L+ACSH +++EG+ F M + ++ PE++HY CMVD+L R+G L EA DMI MP+ P
Sbjct: 356 LNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAP 415
Query: 481 NDSVWGALLLACRIHGEIAANY-----LFQLEPEHTGYFVLMSNIYAASNKWREVGKLRE 535
+ ++WGALL ACRI+ ++ Y + ++P H G VL+SNIY+ S +W E LRE
Sbjct: 416 DVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILRE 475
Query: 536 DMK-NKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
+ ++ KK S IE F D+ +P +E+Y ++ M ++K AGY+P+L
Sbjct: 476 KNEISRDRKKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPELG 535
Query: 595 CALHDVEDE-DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYI 653
LHD++DE D+E L+ HSEKLA+AFG+MN +++ KNLRVC DCH A +FIS +
Sbjct: 536 ELLHDIDDEEDKETALSVHSEKLAIAFGLMNTANGTPIRIVKNLRVCGDCHQATKFISKV 595
Query: 654 YRRKIIVRDANRFHHFEGGTCSCNDYW 680
Y R IIVRD R+HHFE G CSC DYW
Sbjct: 596 YNRVIIVRDRTRYHHFEDGICSCKDYW 622
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 220/458 (48%), Gaps = 45/458 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L+ SC + ++Q H+ L T+ LI+ + A ++K + A LF+ I +
Sbjct: 22 LIDSCKSMQQIKQTHAQLITTALISHP--VSANKLLKLAACASLSYAHKLFDQI--PQPD 77
Query: 75 SFLWNTMIRAYANNGH-CVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLILEGKVV 132
F++NTMI+A++ + H C +L ++ ++ + G+ N Y+F F AC + + EG+ V
Sbjct: 78 LFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQV 137
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV------------------------- 167
++ G ++ +V AL+ MY K G + KV
Sbjct: 138 RIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNM 197
Query: 168 ------FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
FD M RD+VSW+ +I Y Q EAL F K Q G + T+VS +A
Sbjct: 198 SLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAAC 257
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA-RLVFDMMEKRDLISW 280
L + + + +H Y + + SI+ MYA+CG +E A R+ F+ K+ + W
Sbjct: 258 SNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLW 317
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N+M+ G+ +G +EA+ +F++M+ PN VT + L++AC++ + G+ + ++
Sbjct: 318 NAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMV- 376
Query: 341 SNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
S+ I + + ++D+ ++ G L AE+M + + P +V+ W L+ ++ +
Sbjct: 377 SDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSM-PMAPDVAIWGALLNACRIYKDMER 435
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSAC-SHAGLIDEGR 435
+ +G+ P+HI +LS S +G +E R
Sbjct: 436 GYRI--GRIIKGMDPNHIGCHVLLSNIYSTSGRWNEAR 471
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/558 (36%), Positives = 329/558 (58%), Gaps = 9/558 (1%)
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+V+H +I++ D ++ LV Y G T D K+FDEM +D +SW +++ + +
Sbjct: 71 RVIHARVIKSLDYRDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSISWNSLVSGFSRI 130
Query: 190 EKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
L +F + E + +T++SV SA + +H A+ ++ +
Sbjct: 131 GDLGNCLRVFYTMRYEMAFEWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMELEVKV 190
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
N+ + MY + G V+ A +F + +++++SWNSML + QNG +EA+ F+ M+ +
Sbjct: 191 VNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMRVNGL 250
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
P+ T L L+ AC L +L HG I + + T+ ++++Y+K G L+ +
Sbjct: 251 FPDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNVSHK 310
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F +I S+ + + ++AGY MHGHG++A+EFF + EG+KPDH+TFT +LSACSH+
Sbjct: 311 VFAEI--SKPDKVALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSHS 368
Query: 429 GLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGA 487
GL+ +G+ F M+ V+P++ HY+CMVD+LGR G L +A+ +IK MPL PN VWGA
Sbjct: 369 GLVMDGKYYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWGA 428
Query: 488 LLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
LL ACR++ G+ AA L L P ++++SNIY+A+ W + K+R MK K
Sbjct: 429 LLGACRVYRNINLGKEAAENLIALNPSDPRNYIMLSNIYSAAGLWSDASKVRALMKTKVF 488
Query: 543 KKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
+ A S IE+G I F D +P ++++K+E + +IK G++ + LHDV++
Sbjct: 489 IRNAGCSFIEHGNKIHRFVVDDYSHPDSDKIHRKLEEIMRKIKEVGFVSETESILHDVDE 548
Query: 603 EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
E + M+N HSEK+A+AFG++ + + + KNLR+C DCH+ +F+S I +R II+RD
Sbjct: 549 EVKTDMINKHSEKIALAFGLLVSNADMPLVIIKNLRICLDCHNTAKFVSLIEKRTIIIRD 608
Query: 663 ANRFHHFEGGTCSCNDYW 680
+ RFHHF G CSC DYW
Sbjct: 609 SKRFHHFSDGLCSCADYW 626
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 201/429 (46%), Gaps = 16/429 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R IH+ + S L + +G +++ Y G A+ LF+ + + S S WN+++ +
Sbjct: 71 RVIHARVIKS-LDYRDGFIGDQLVSCYLNMGSTPDAQKLFDEMPHKDSIS--WNSLVSGF 127
Query: 86 ANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ G L ++ TMR N T V+ ACA EG +H ++ G +
Sbjct: 128 SRIGDLGNCLRVFYTMRYEMAFEWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMELE 187
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
V A ++MY K G D K+F + +++VSW M+ + Q P EA+ F +
Sbjct: 188 VKVVNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMRV 247
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
GL D TI+S+ A +L +A+HG E++ I +++ +Y++ G +
Sbjct: 248 NGLFPDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNV 307
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
+ VF + K D ++ +ML GY +G EA+ F KP+ VT L+SAC++
Sbjct: 308 SHKVFAEISKPDKVALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSH 367
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLR--NAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
G G K++ I++ ++ L + ++D+ +CG L+ A + + P E N
Sbjct: 368 SGLVMDG-KYYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSM-PLEPNSGV 425
Query: 383 WNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
W L+ ++ + G++A E L ++I ++I SA AGL + K A
Sbjct: 426 WGALLGACRVYRNINLGKEAAENLIA-LNPSDPRNYIMLSNIYSA---AGLWSDASKVRA 481
Query: 440 DM-TKLSVK 447
M TK+ ++
Sbjct: 482 LMKTKVFIR 490
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/598 (35%), Positives = 351/598 (58%), Gaps = 22/598 (3%)
Query: 99 STMRRSGISSNSYTFPFV------LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALV 152
++++ + IS++ + PF+ LK+ +S S+ +++H +I++ D ++ LV
Sbjct: 32 TSLQFNAISTHHFD-PFLSTLILHLKSSSSVSIC---RIIHAHVIKSLDYRDGFIGDQLV 87
Query: 153 DMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS-DS 211
Y K G T D +FDEM +D VSW +++ + + E L +F K + + L +
Sbjct: 88 SCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNE 147
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA-RLVFD 270
T +SV SA + VH A+ + ++ + N++V MY + G VE A RL +
Sbjct: 148 FTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSE 207
Query: 271 MME-KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
M E ++ ++SWNS++ QNG +EA FD M+ + P+ T + L+ AC +
Sbjct: 208 MPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGR 267
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
+ HG I + + T+ ++++Y+K G L+ + +F +I S+ + +W ++AG
Sbjct: 268 MVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEI--SKPDKVAWTAMLAG 325
Query: 390 YGMHGHGRKALEFFSQML-EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVK 447
Y MHG G++A+EFF +++ EEG++PDH+TFT +LSACSH+GL+ EG+ F M+ + V+
Sbjct: 326 YAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQ 385
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANY 502
P + HY+CMVD+LGR G L +A ++IK MP PN VWGALL ACR+H G+ AA
Sbjct: 386 PRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKN 445
Query: 503 LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHT 562
L L+P ++++SN+Y+A+ W + K+R MKNK L + S IE+G I F
Sbjct: 446 LIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVV 505
Query: 563 ADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGI 622
D +P ++KK+E + +I+ G++ + LHDV++E + M+ HSEK+A+A+G+
Sbjct: 506 DDYTHPDSHRIHKKLEEVMKKIQDVGFVHETESILHDVDEEVKIDMITKHSEKIALAYGL 565
Query: 623 MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ + + + KNLR+C DCH+ +F+S + +R II+RD RFH F GG CSC DYW
Sbjct: 566 LVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKRTIIIRDTKRFHQFSGGLCSCGDYW 623
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 184/384 (47%), Gaps = 11/384 (2%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
LKS + ++ R IH+ + S L + +G +++ Y G A LF+ + S
Sbjct: 55 LKSSSSVSICRIIHAHVIKS-LDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVS 113
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHG 134
WN+++ A G E L ++ M+ S + N +TF V+ AC S EG VH
Sbjct: 114 --WNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHC 171
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM--SVRDLVSWTVMITAYEQAEKP 192
++ G + + V ALV+MY K G + ++F EM S + +VSW ++ Q P
Sbjct: 172 CAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMP 231
Query: 193 EEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EA F + G D T+VS+ A + +HG E+L I ++
Sbjct: 232 NEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTL 291
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPN 311
+ +Y++ G + +R VF+ + K D ++W +ML GY +G EA+ F+ + + +P+
Sbjct: 292 LNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPD 351
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENM 369
VT L+SAC++ G + G+ F +++ K+ L + ++D+ +CG LD A +
Sbjct: 352 HVTFTHLLSACSHSGLVKEGKYFF-RVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHEL 410
Query: 370 FNDIHPSERNVSSWNVLIAGYGMH 393
++ P E N W L+ +H
Sbjct: 411 IKNM-PFEPNSGVWGALLGACRVH 433
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/625 (35%), Positives = 343/625 (54%), Gaps = 54/625 (8%)
Query: 104 SGISSNSY----TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
SG SS S TF +LK S + I K +H ++ G ++ + L+ Y C
Sbjct: 45 SGTSSFSLPSHSTFVQLLKKRPSLTQI---KQIHAQVVTHGLAQNTSLLGPLIHSYIGCR 101
Query: 160 QTDDGCKVFDEM-SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG--LLSDSVTIVS 216
VFD+ S+ + W +MI AY + +E+L LF + G +D T
Sbjct: 102 NLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTF 161
Query: 217 VASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
V +A + + + VHG + + + D+ + NS+V MY+ + A+ VFD M +R
Sbjct: 162 VFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQR 221
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQ------------------------------- 304
D+I+W S++ GY G+ A LFD M
Sbjct: 222 DVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDML 281
Query: 305 -NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ + KPN + ++SAC +LG+ G+ H YI + + + + + A++DMYAKCG +
Sbjct: 282 CHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRI 341
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
D A +F+ +H +R++ +W +I+G MHG G + L FS+ML EG KPD IT +L+
Sbjct: 342 DCARRVFDGLH--KRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLN 399
Query: 424 ACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
CSH+GL++EG F DM L + P+++HY C++D+LGRAG L AF+ IK MP+ P+
Sbjct: 400 GCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDV 459
Query: 483 SVWGALLLACRIHGEI-----AANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLRED 536
W ALL ACRIHG++ N++ +L P H G +VL+SN+YA+ +W V K+R+
Sbjct: 460 VAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKA 519
Query: 537 MKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKM-AGYMPDLSC 595
M +G + S IE + F AD+++P E+ KK+ + I + GY+P
Sbjct: 520 MSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQ 579
Query: 596 ALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYR 655
L D+ +ED+E +++HSEKLAVAFG+++ T E +++TKNLR C DCHSA + IS ++
Sbjct: 580 VLFDLNEEDKEQAVSWHSEKLAVAFGLLS-TQEGTIRITKNLRTCEDCHSAMKTISLVFN 638
Query: 656 RKIIVRDANRFHHFEGGTCSCNDYW 680
R+I+VRD +RFH F G CSC DYW
Sbjct: 639 REIVVRDRSRFHTFRYGNCSCTDYW 663
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 204/425 (48%), Gaps = 40/425 (9%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
PS F QLLK L ++QIH+ + T GL LG +I Y + AR +F
Sbjct: 53 PSHSTFV-QLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGP-LIHSYIGCRNLSFARIVF 110
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG--ISSNSYTFPFVLKACASN 123
+ + + +WN MI+AY+ E+L L+ M G S++ YTF FV AC+ +
Sbjct: 111 DQFPSLPP-TIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRH 169
Query: 124 -SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT-- 180
+L G+ VHG +++ G+ SD +V +LV+MY+ + D +VFDEM RD+++WT
Sbjct: 170 PTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSV 229
Query: 181 -----------------------------VMITAYEQAEKPEEALILFQKTQ-QEGLLSD 210
VM+ Y EAL F + + +
Sbjct: 230 VKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPN 289
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
+VS+ SA LG + + + +H Y N L I +++ MYA+CG ++ AR VFD
Sbjct: 290 EAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFD 349
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
+ KRDL++W SM++G +G +E L F EM KP+ +T L +++ C++ G +
Sbjct: 350 GLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEE 409
Query: 331 GRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G FH I + ++D+ + G L++A + P E +V +W L++
Sbjct: 410 GLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSM-PMEPDVVAWRALLSA 468
Query: 390 YGMHG 394
+HG
Sbjct: 469 CRIHG 473
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/512 (39%), Positives = 304/512 (59%), Gaps = 41/512 (8%)
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKAR 266
+L D+ T V A +L DV+ + +HG F +L +QN I+ +Y CG + A
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 267 LVFDMMEKRDLISWN-------------------------------SMLTGYIQNGQASE 295
L+F+ M +RD ++WN SM++G++Q G+ +E
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
A+ LF ++++ +PN VT + +++AC LG LGR H Y S K + + N ++D
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLID 185
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KCG L+ A +F ++ ER V SW+ +IAG MHG +AL FS+M++ GVKP+
Sbjct: 186 MYVKCGCLENARRVFYEME--ERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
+TF +L ACSH GLIDEGR+ FA MT V P+++HY C+VD+ RAG L EA + I
Sbjct: 244 VTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFIL 303
Query: 475 QMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
MP+ PN VWGALL C++H I A +L +L+P + GY+V++SNIYA + +W +
Sbjct: 304 SMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWED 363
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGY 589
++R+ MK++G+KK + +S I + F D+ +P +++ K + + V++K GY
Sbjct: 364 AARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGY 423
Query: 590 MPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFR 648
P S L D+E++++E L HSEKLAV FG+M TPE +++ KNLRVC DCH+A +
Sbjct: 424 APKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMT-TPEGTPIRIMKNLRVCEDCHAALK 482
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
IS I R+IIVRD NRFH F G CSC D+W
Sbjct: 483 IISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 168/325 (51%), Gaps = 33/325 (10%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
MR + +++T FVLKAC S ++ GK +HG + GF S+ ++Q ++++Y CG+
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 161 TDDGCKVFDEMSVRDLV-------------------------------SWTVMITAYEQA 189
D +F++M RD V SWT MI+ + Q
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
KP EA+ LF K + E + + VT+VSV +A LGD+ + VH Y+ + F ++ +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N+++ MY +CG +E AR VF ME+R ++SW++M+ G +GQA EAL LF EM K
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR-NAVMDMYAKCGDLDTAEN 368
PN VT + L+ AC+++G GR+F + I V+D++++ G L+ A
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMH 393
+ P + N W L+ G +H
Sbjct: 301 FILSM-PIKPNGVVWGALLGGCKVH 324
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 4/241 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I + G+ + A F + N S W +MI + G E ++L+ + +
Sbjct: 82 VIAQLAKRGDIDGAYGFFLRMPNKNVRS--WTSMISGFVQCGKPNEAIDLFMKLEDEAVR 139
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N T VL ACA + G++VH ++GF + +V L+DMY KCG ++ +V
Sbjct: 140 PNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRV 199
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F EM R +VSW+ MI + EEAL LF + + G+ + VT + + A +G +
Sbjct: 200 FYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLI 259
Query: 228 LKAQAVHGYAICN-AFLEDLCIQNSIVAMYARCGNVEKA-RLVFDMMEKRDLISWNSMLT 285
+ + + + + +V +++R G +E+A + M K + + W ++L
Sbjct: 260 DEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLG 319
Query: 286 G 286
G
Sbjct: 320 G 320
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 321/594 (54%), Gaps = 42/594 (7%)
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
L K +H II+ G + L++ Y KCG D ++FD + RD V+W ++TA
Sbjct: 20 LLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTAC 79
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG--DVLKAQAVHGYAICNAFLE 244
+ +P AL + + G D S+ A LG V + + VH + F +
Sbjct: 80 NLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSD 139
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY----------------- 287
D +++S++ MYA+ G + R VFD + + ISW +M++GY
Sbjct: 140 DDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTP 199
Query: 288 --------------IQNGQASEALLLFDEMQNSDCK-PNPVTALILVSACTYLGSRQLGR 332
+Q+G +A LF EM++ +P+ +V AC L +LG+
Sbjct: 200 YRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGK 259
Query: 333 KFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGM 392
+ HG +I + + NA++DMYAKC DL A+ +F ++ ++V SW +I G
Sbjct: 260 QMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEM--CRKDVVSWTSIIVGTAQ 317
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVK 451
HG +AL + +M+ GVKP+ +TF ++ ACSHAGL+ +GR F M + + P ++
Sbjct: 318 HGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQ 377
Query: 452 HYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQL 506
HY C++D+ R+G L EA ++I+ MP+ P++ W ALL +C+ HG A++L L
Sbjct: 378 HYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNL 437
Query: 507 EPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRV 566
+PE ++L+SNIYA + W +V K+R+ M KK +S I+ GK F+ +
Sbjct: 438 KPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETS 497
Query: 567 NPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLT 626
+P E+ + + E++ GY PD S LHD++ +++E L +HSE+LAVA+G++
Sbjct: 498 HPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAV 557
Query: 627 PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P V+++ KNLRVC DCH+ + IS I R+I VRDA R+HHF+ G CSCND+W
Sbjct: 558 PGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 231/468 (49%), Gaps = 45/468 (9%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+++H+ + +GL NQ + ++ Y G A LF+++ + W +++ A
Sbjct: 23 KKLHAQIIKAGL-NQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVA--WASLLTAC 79
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL--ILEGKVVHGDIIRTGFLS 143
+ L + ++ +G + + F ++KACA+ + + +GK VH + F
Sbjct: 80 NLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSD 139
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT- 202
D V+++L+DMYAK G D G VFD +S + +SWT MI+ Y ++ + EA LF++T
Sbjct: 140 DDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTP 199
Query: 203 ------------------------------QQEGL-LSDSVTIVSVASAVGQLGDVLKAQ 231
+ EG+ ++D + + SV A L +
Sbjct: 200 YRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGK 259
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+HG I + L I N+++ MYA+C ++ A+ +F M ++D++SW S++ G Q+G
Sbjct: 260 QMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHG 319
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
QA EAL L+DEM + KPN VT + L+ AC++ G GR ++ + I +L++
Sbjct: 320 QAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDH-GISPSLQH 378
Query: 352 --AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
++D++++ G LD AEN+ + P + +W L++ HG+ + A+ +L
Sbjct: 379 YTCLLDLFSRSGHLDEAENLIRTM-PVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLN- 436
Query: 410 GVKPDHITFTSILSAC-SHAGLIDEGRKCFADMTKLSVKPEVKHYACM 456
+KP+ + +LS + AG+ ++ K M L K + Y+C+
Sbjct: 437 -LKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAK-KAPGYSCI 482
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 163/353 (46%), Gaps = 54/353 (15%)
Query: 12 YDQLLKSCNFLASL-----RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFN 66
+ L+K+C L L +Q+H+ S + + + + +I Y +G P+ R++F+
Sbjct: 107 FASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDV-VKSSLIDMYAKFGLPDYGRAVFD 165
Query: 67 SIHNDKSYSFLWNTMIRAYA-------------------------------NNGHCVETL 95
SI + S S W TMI YA +G+ V+
Sbjct: 166 SISSLNSIS--WTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAF 223
Query: 96 ELYSTMRRSGIS-SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDM 154
L+ MR GIS ++ V+ ACA+ +L GK +HG +I G+ S ++ AL+DM
Sbjct: 224 HLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDM 283
Query: 155 YAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTI 214
YAKC +F EM +D+VSWT +I Q + EEAL L+ + G+ + VT
Sbjct: 284 YAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTF 343
Query: 215 VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS------IVAMYARCGNVEKAR-L 267
V + A G V K G + +ED I S ++ +++R G++++A L
Sbjct: 344 VGLIHACSHAGLVSK-----GRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENL 398
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
+ M D +W ++L+ ++G A+ + D + N KP ++ IL+S
Sbjct: 399 IRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLN--LKPEDPSSYILLS 449
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 227/669 (33%), Positives = 363/669 (54%), Gaps = 56/669 (8%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
I+ Y G P AR +F+ + S WN ++ Y N E ++ M
Sbjct: 54 IVSGYFANGLPREARQMFDEMPERNIVS--WNGLVSGYIKNRMIEEARNVFEIMP----E 107
Query: 108 SNSYTFPFVLKACASNSLILEGK---------------VVHGDIIRTGFLSDS------- 145
N ++ ++K +++E + V+ G +I G + D+
Sbjct: 108 RNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMM 167
Query: 146 -----YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
++ + G+ D+ ++FDEM R++++WT MIT Y Q ++ + A LF+
Sbjct: 168 PGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFE 227
Query: 201 KTQQEGLLSDSVTIV--SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
++ +S + ++ +++ + + + + CNA IVA+
Sbjct: 228 VMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAM---------IVAL-GE 277
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G + KAR VFD ME RD +W M+ Y + G EAL LF +MQ +P+ + + +
Sbjct: 278 VGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISI 337
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+S C L S Q GR+ H +++ D + + +M MY KCG+L A+ +F D PS +
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVF-DRFPS-K 395
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
++ WN +I+GY HG G +AL+ F +M G P+ +T +IL+ACS+ G ++EG + F
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIF 455
Query: 439 ADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-- 495
M +K V P V+HY+C VDMLGRAG + +A ++I M + P+ +VWGALL AC+ H
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSR 515
Query: 496 ---GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
E+AA LF++EPE+ G ++L+S+I A+ +KW +V ++R++M+ K + K S IE
Sbjct: 516 LDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIE 575
Query: 553 YGKDIQGFHTAD-RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
GK + F R +P + +E ++ AGY PD S LHDV++E++ L+
Sbjct: 576 VGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635
Query: 612 HSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSE+LAVA+G++ L PE V ++V KNLRVC DCH+A + IS + R+II+RDANRFHHF
Sbjct: 636 HSERLAVAYGLLKL-PEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFN 694
Query: 671 GGTCSCNDY 679
G CSC DY
Sbjct: 695 NGECSCRDY 703
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 170/375 (45%), Gaps = 44/375 (11%)
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
++V Y G + ++FDEM R++VSW +++ Y + EEA +F+ + ++S
Sbjct: 53 SIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVS 112
Query: 210 DSVTIVSVASAVGQLGDVLKAQ--------------------AVHGYAICNAFL------ 243
+ + Q G V++A+ + G I +A
Sbjct: 113 WTAMVKGYV----QEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMP 168
Query: 244 -EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+D+ +++ R G V++AR +FD M +R++I+W +M+TGY QN + A LF+
Sbjct: 169 GKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEV 228
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLR-NAVMDMYAKCG 361
M + V+ ++ T G + +F M + + NA++ + G
Sbjct: 229 MP----EKTEVSWTSMLLGYTLSGRIEDAEEFF-----EVMPMKPVIACNAMIVALGEVG 279
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSI 421
++ A +F+ + +R+ ++W +I Y G +ALE F+QM +GV+P + SI
Sbjct: 280 EIVKARRVFDQME--DRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISI 337
Query: 422 LSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPN 481
LS C+ + GR+ A + + +V + ++ M + G L +A + + P +
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFP-SKD 396
Query: 482 DSVWGALLLACRIHG 496
+W +++ HG
Sbjct: 397 IIMWNSIISGYASHG 411
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 153/356 (42%), Gaps = 63/356 (17%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ ++ GQ ++ K FD + + + SW +++ Y P EA +F + + ++S
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVS-- 81
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDM 271
N +V+ Y + +E+AR VF++
Sbjct: 82 -------------------------------------WNGLVSGYIKNRMIEEARNVFEI 104
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M +R+++SW +M+ GY+Q G EA LLF M N V+ ++ G
Sbjct: 105 MPERNVVSWTAMVKGYVQEGMVVEAELLFWRMPER----NEVSWTVMFGGLIDGGRIDDA 160
Query: 332 RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
RK + + D ++ + G +D A +F+++ ERNV +W +I GYG
Sbjct: 161 RKLYDMMPGK----DVVASTNMIGGLCREGRVDEAREIFDEMR--ERNVITWTTMITGYG 214
Query: 392 MHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVK 451
+ A + F M E+ +++TS+L + +G I++ + F M +KP +
Sbjct: 215 QNKRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKPVI- 266
Query: 452 HYAC--MVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-EIAANYLF 504
AC M+ LG G + +A + QM +++ W ++ A G E+ A LF
Sbjct: 267 --ACNAMIVALGEVGEIVKARRVFDQME-DRDNATWRGMIKAYERKGFELEALELF 319
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/544 (37%), Positives = 322/544 (59%), Gaps = 16/544 (2%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D+ L+ + G D ++F M VRD+VSW M++ ++ EEA +F
Sbjct: 128 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 187
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+ +SV+ ++ S D+ A+ A D + ++V+ Y GNV
Sbjct: 188 ----VRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVV 240
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSAC 322
KA F+ M R+L+SWN+++ GY++N A +AL LF M + ++ +PN T ++ C
Sbjct: 241 KAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 300
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ L + G++ H + + + + T+ +++ MY KCGDL +A +F ++H R+V +
Sbjct: 301 SNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMH--TRDVVA 358
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
WN +I+GY HG G++A+ F +M +EGV+P+ ITF ++L+AC H GL D G +CF M
Sbjct: 359 WNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQ 418
Query: 443 KL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
+L ++P V HY+CMVD+L RAG L A D+I+ MP P+ S +G LL ACR++
Sbjct: 419 ELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFA 478
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
E+AA L + +P+ G +V ++NIYA +N+W +V ++R MK+ + K +S IE
Sbjct: 479 ELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGV 538
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F + DR++P +++K+ +A +K GY+PDL LHDV++ + ML HSEKL
Sbjct: 539 MHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKL 598
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
A++FG+++ P +++ KNLRVC DCH+A + IS I R+II+RD RFHHF GG CSC
Sbjct: 599 AISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSC 658
Query: 677 NDYW 680
DYW
Sbjct: 659 GDYW 662
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 49 IIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGIS 107
++K Y E R+L + WN ++ Y N H + L L+ TM R + +
Sbjct: 239 VVKAIEYFEAMPVRNLVS-----------WNAVVAGYVKNSHADDALRLFRTMVREANVQ 287
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N+ T VL C++ S + GK +H ++ + V +LV MY KCG CK+
Sbjct: 288 PNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKL 347
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
F EM RD+V+W MI+ Y Q +EA+ LF++ + EG+ + +T V+V +A G
Sbjct: 348 FGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 405
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 139/318 (43%), Gaps = 44/318 (13%)
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC-GNVEKARLVF 269
S++ V+VA+AV + GD+ A+ A + + N ++A YAR G + AR +F
Sbjct: 67 SLSTVAVAAAV-RRGDLTGAEE----AFASTPRKTTATYNCLLAGYARALGRLADARHLF 121
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D + D +S+N++L+ + +G A A LF M D V+ +VS + G+ +
Sbjct: 122 DRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV----VSWNTMVSGLSKSGAVE 177
Query: 330 LGRK----------------FHGYIINSNM------------KIDATLRNAVMDMYAKCG 361
+ G+ + +M K DA L A++ Y G
Sbjct: 178 EAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIG 237
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTS 420
++ A F + RN+ SWN ++AGY + H AL F M+ E V+P+ T +S
Sbjct: 238 NVVKAIEYFEAM--PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSS 295
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
+L CS+ + G++ KL + + +V M + G L A + +M
Sbjct: 296 VLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHT-- 353
Query: 481 NDSV-WGALLLACRIHGE 497
D V W A++ HG+
Sbjct: 354 RDVVAWNAMISGYAQHGD 371
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 14 QLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
+L C+ L++L +QIH L ++ L +G ++ Y G+ ++A LF +H
Sbjct: 295 SVLLGCSNLSALGFGKQIHQWCMKLPL-SRNLTVGTSLVSMYCKCGDLSSACKLFGEMHT 353
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ WN MI YA +G E + L+ M+ G+ N TF VL AC L
Sbjct: 354 RDVVA--WNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 406
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 238/783 (30%), Positives = 391/783 (49%), Gaps = 119/783 (15%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y LK+C + + +IH L G + ++L ++ Y A +F+ +
Sbjct: 136 YSVALKTCTRVMDIWLGMEIHGCLIKRGF-DLDVYLRCALMNFYGRCWGLEKANQVFHEM 194
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
N ++ LWN I + + +EL+ M+ S + + + T VL+AC +
Sbjct: 195 PNPEA--LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNA 252
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY-- 186
K +HG + R G SD + L+ MY+K G+ + +VFD M R+ SW MI++Y
Sbjct: 253 AKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAA 312
Query: 187 --------------EQAE-KP------------------EEALILFQKTQQEGLLSDSVT 213
E ++ KP EE L + Q+ Q EG +S +
Sbjct: 313 LGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSS 372
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF---- 269
+ SV A+ +LG + + HGY + N F D+ + S++ MY + ++ A+ VF
Sbjct: 373 MTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMK 432
Query: 270 ---------------------------DMMEKR----DLISWNSMLTGYI---------- 288
+ MEK DL++WN M++GY
Sbjct: 433 NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALA 492
Query: 289 -------------------------QNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
Q G ++L F +MQ PN + L+ AC
Sbjct: 493 VLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACA 552
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L Q G++ H I + D + A++DMY+K L A +F I + ++SW
Sbjct: 553 SLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ--NKTLASW 610
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-T 442
N +I G+ + G G++A+ F++M + GV PD ITFT++LSAC ++GLI EG K F M T
Sbjct: 611 NCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMIT 670
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GE 497
+ P ++HY CMVD+LGRAG L EA+D+I MPL P+ ++WGALL +CRIH E
Sbjct: 671 DYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAE 730
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA LF+LEP ++ ++LM N+Y+ N+W ++ LRE M G++ +S I+ + +
Sbjct: 731 TAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRV 790
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F + ++ +P ++Y ++ + E+K GY+PD++C ++++ +++ +L H+EKLA
Sbjct: 791 HVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLA 850
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+ +G++ + ++V KN R+C+DCHSA ++IS + R++ +RD RFHHF G CSCN
Sbjct: 851 ITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCN 910
Query: 678 DYW 680
D+W
Sbjct: 911 DFW 913
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 222/454 (48%), Gaps = 41/454 (9%)
Query: 78 WNTMIRAYANNGHCVE-TLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN+ + + ++ + LE++ + G+ +S + LK C I G +HG +
Sbjct: 100 WNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCL 159
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
I+ GF D Y++ AL++ Y +C + +VF EM + + W I Q+EK ++ +
Sbjct: 160 IKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGV 219
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF+K Q L +++ TIV V A G++G + A+ +HGY D+ + N +++MY
Sbjct: 220 ELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMY 279
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
++ G +E AR VFD ME R+ SWNSM++ Y G ++A LF E+++SD KP+ VT
Sbjct: 280 SKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWN 339
Query: 317 ILVS-----------------------------------ACTYLGSRQLGRKFHGYIINS 341
L+S A + LG +G++ HGY++ +
Sbjct: 340 CLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRN 399
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
D + +++DMY K L +A+ +F+++ RN+ +WN L++GY G AL
Sbjct: 400 GFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNM--KNRNIFAWNSLVSGYSFKGMFEDALR 457
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLG 461
+QM +EG+KPD +T+ ++S + G E L + P V + ++
Sbjct: 458 LLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSS 517
Query: 462 RAGCLYEAFDMIKQMP---LPPNDSVWGALLLAC 492
+AG ++ QM + PN + LL AC
Sbjct: 518 QAGNNRDSLKFFAQMQQEGVMPNSASITCLLRAC 551
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 130/301 (43%), Gaps = 12/301 (3%)
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN-GQASEALLLFDEMQNSDCK 309
++++ Y G+ A +VF + R+ + WNS + + + G L +F E+
Sbjct: 71 NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 130
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ + + CT + LG + HG +I +D LR A+M+ Y +C L+ A +
Sbjct: 131 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 190
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F+++ E + WN I +K +E F +M +K + T +L AC G
Sbjct: 191 FHEMPNPEALL--WNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMG 248
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++ ++ + + + +V ++ M + G L A + M N S W +++
Sbjct: 249 ALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSSWNSMI 307
Query: 490 LACRIHGEI--AANYLFQLE-----PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
+ G + A + ++LE P+ + L+S + K EV + + M+ +G
Sbjct: 308 SSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYK-EEVLNILQRMQGEGF 366
Query: 543 K 543
K
Sbjct: 367 K 367
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 330/594 (55%), Gaps = 45/594 (7%)
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG--CKVFDEMSVRDLVSWTVMITAYE 187
K VH I+ G YV A L+ K D +F++++ + + +I Y
Sbjct: 63 KQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALIRGYL 122
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI-CNAFLEDL 246
E+ +E+ + ++EG++ S T ++ A G DV + +HG I F EDL
Sbjct: 123 IEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDL 182
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS------------------------ 282
+ NS++ MY +CG +E R VFD M RD+ISW
Sbjct: 183 HVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVK 242
Query: 283 -------MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
M++G+ QN + EA++ F++MQ + + +T + ++SAC LG+ +
Sbjct: 243 DMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIR 302
Query: 336 GYIINSNM--KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
S K + +A++DMY+KCG + A +F + ERNV S++ +I G+ MH
Sbjct: 303 DVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGM--KERNVYSYSSMILGFAMH 360
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKH 452
G A++ F +M++ +KP+ +TF +L+ACSHAG++++G + F M K +KP H
Sbjct: 361 GRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADH 420
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLE 507
Y CMVD+LGRAG L EA +++K MP+ P+ VWGALL ACRIH IAAN+LF+LE
Sbjct: 421 YTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELE 480
Query: 508 PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD-IQGFHTADRV 566
P G ++L++NIYA+ +W +V +R+ M+ +GL+K AFS IE K + F + D
Sbjct: 481 PYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMT 540
Query: 567 NPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLT 626
+P E+ + +E + ++ GY P LS +DV DED+ +L HSEKLA+AFG+++
Sbjct: 541 HPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLISTI 600
Query: 627 PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P + +++ KNLR+C DCHS S I R+IIVRD RFHHF G CSC ++W
Sbjct: 601 PGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 214/415 (51%), Gaps = 41/415 (9%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L C L ++Q+H+ + +GL +Q+ ++ AK+I T P L SI N +Y
Sbjct: 53 LDGCKNLTQIKQVHARILLNGL-DQSCYVLAKLIRTLTKLNIPVDPYPL--SIFNQVNYP 109
Query: 76 --FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
FL+N +IR Y E+ E YS MR+ G+ S+TF + KAC + + G+ +H
Sbjct: 110 NPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIH 169
Query: 134 GD-IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM--------------------- 171
G I+ GF D +V +++DMY KCG + G KVFDEM
Sbjct: 170 GQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNM 229
Query: 172 ----------SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
V+D+V+WTVM++ + Q KP EA++ F+K Q+ G+ +D +T++ V SA
Sbjct: 230 ESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISAC 289
Query: 222 GQLGDVLKAQAVHGYAICNAF--LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
QLG A + A + F + + ++++ MY++CG+V A VF M++R++ S
Sbjct: 290 AQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYS 349
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
++SM+ G+ +G+ +A+ LFDEM ++ KPN VT + +++AC++ G + G + +
Sbjct: 350 YSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELME 409
Query: 340 NS-NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+K A ++D+ + G L A + + P E + W L+ +H
Sbjct: 410 KCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTM-PIEPHGGVWGALLGACRIH 463
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/587 (35%), Positives = 334/587 (56%), Gaps = 13/587 (2%)
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
+++ G+ ++S T+ ++K C SN + EG ++ + G ++ L++MY K
Sbjct: 51 SLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFN 110
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVAS 219
+D ++FD+M R+++SWT MI+AY + + ++AL L ++ + + T SV
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
+ + DV + +H I D+ ++++++ ++A+ G E A VFD M D I
Sbjct: 171 SCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WNS++ G+ QN ++ AL LF M+ + T ++ ACT L +LG + H +I+
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ D L NA++DMY KCG L+ A +FN + ER+V +W+ +I+G +G+ ++A
Sbjct: 288 KYDQ--DLILNNALVDMYCKCGSLEDALRVFNQM--KERDVITWSTMISGLAQNGYSQEA 343
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
L+ F +M G KP++IT +L ACSHAGL+++G F M KL + P +HY CM+D
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMID 403
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LG+AG L +A ++ +M P+ W LL ACR+ E AA + L+PE G
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGT 463
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+ L+SNIYA S KW V ++R M+++G+KK S IE K I F D +P EV
Sbjct: 464 YTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEV 523
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
KK+ + + GY+P+ + L D+E E E L +HSEKLA+AFG+M L E V+++
Sbjct: 524 SKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRI 583
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C DCH + S + R I++R R+HHF+ G CSC DYW
Sbjct: 584 RKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 204/396 (51%), Gaps = 41/396 (10%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAK---------IIIKYTTYGEPNTAR 62
Y +L+K C S R +H LI + L+ +I Y + N A
Sbjct: 64 YSELIKCC---ISNRAVHEG----NLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAH 116
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
LF+ + S W TMI AY+ + LEL M R + N YT+ VL++C
Sbjct: 117 QLFDQMPQRNVIS--WTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
S + +++H II+ G SD +V++AL+D++AK G+ +D VFDEM D + W +
Sbjct: 175 MS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I + Q + + AL LF++ ++ G +++ T+ SV A L + H + + +
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KY 289
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+DL + N++V MY +CG++E A VF+ M++RD+I+W++M++G QNG + EAL LF+
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLG-------RKFHGYIINSNMKIDATLRN--AV 353
M++S KPN +T + ++ AC++ G + G +K +G ID + +
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG--------IDPVREHYGCM 401
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
+D+ K G LD A + N++ E + +W L+
Sbjct: 402 IDLLGKAGKLDDAVKLLNEME-CEPDAVTWRTLLGA 436
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/610 (36%), Positives = 342/610 (56%), Gaps = 32/610 (5%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELY-STMRRSGI 106
+I + +G + AR F+ + S WN M+ AY NG E L+ S I
Sbjct: 137 MISSHANHGLVSLARHYFDLAPEKDAVS--WNGMLAAYVRNGRVEEARGLFNSRTEWDVI 194
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
S N+ +V S + L ++ D++ + V YA+ G + +
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM---------VSGYARRGDMVEARR 245
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD VRD+ +WT +++ Y Q EEA +F + ++V+ ++ +A Q
Sbjct: 246 LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRM 301
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ +A+ + C ++ N+++ YA+ G +E+A+ VFD M ++D +SW +ML
Sbjct: 302 MDEAKELFNMMPC----RNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y Q G + E L LF EM N ++S C + + + G + HG +I + +
Sbjct: 358 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 417
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ NA++ MY KCG+++ A N F ++ ER+V SWN +IAGY HG G++ALE F M
Sbjct: 418 CFVGNALLAMYFKCGNMEDARNAFEEME--ERDVVSWNTMIAGYARHGFGKEALEIFDMM 475
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLGRA 463
KPD IT +L+ACSH+GL+++G F M ++ KPE HY CM+D+LGRA
Sbjct: 476 RTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPE--HYTCMIDLLGRA 533
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L EA D++K MP P+ ++WGALL A RIH G AA +F+LEPE+ G +VL+S
Sbjct: 534 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLS 593
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA+S KWR+ K+R M+ +G+KK FS IE + F D V+P +++Y +E
Sbjct: 594 NIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLE 653
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ + +K AGY+ LHDVE+E++EHML YHSEKLAVA+GI+N+ P ++V KNLR
Sbjct: 654 DLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLR 713
Query: 639 VCNDCHSAFR 648
VC DCH+AF+
Sbjct: 714 VCGDCHNAFK 723
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 33/343 (9%)
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
+ + + G+ D ++F M R ++ M+ Y + A LF+ + S +
Sbjct: 45 ITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYN 104
Query: 212 VTI--VSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
+ ++V+S++ + V D N +++ +A G V AR F
Sbjct: 105 TLLHALAVSSSLADARGLFDEMPVR----------DSVTYNVMISSHANHGLVSLARHYF 154
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D+ ++D +SWN ML Y++NG+ EA LF NS + + ++ L+S G
Sbjct: 155 DLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----NSRTEWDVISWNALMSGYVQWGKMS 210
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
R+ + D N ++ YA+ GD+ A +F D P R+V +W +++G
Sbjct: 211 EARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLF-DAAPV-RDVFTWTAVVSG 264
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
Y +G +A F M E + +++ ++++A ++DE ++ F M +
Sbjct: 265 YAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN---- 316
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA 491
V + M+ +AG L EA + M P D+V W A+L A
Sbjct: 317 VASWNTMLTGYAQAGMLEEAKAVFDTM--PQKDAVSWAAMLAA 357
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 121/293 (41%), Gaps = 55/293 (18%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ----------------- 292
N + + R G V A +F M +R ++N+ML GY NG+
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101
Query: 293 --------------ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
++A LFDEM D VT +++S+ G L R +
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDS----VTYNVMISSHANHGLVSLARHY---- 153
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ + DA N ++ Y + G ++ A +FN +E +V SWN L++GY G +
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS--RTEWDVISWNALMSGYVQWGKMSE 211
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
A E F +M D +++ ++S + G + E R+ F D + +V + +V
Sbjct: 212 ARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLF-DAAPVR---DVFTWTAVVS 263
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC---RIHGEIAANYLFQLEP 508
+ G L EA + MP N W A++ A R+ E A LF + P
Sbjct: 264 GYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDE--AKELFNMMP 313
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/436 (43%), Positives = 274/436 (62%), Gaps = 8/436 (1%)
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
+++ YA+ G +++AR++FD +E+RD I WN M+ GY Q+G +E LLLF +M N+ +P
Sbjct: 11 AMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRP 70
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N VT L ++SAC G+ + GR H YI N+ + I+ + +++DMY+KCG L+ A +F
Sbjct: 71 NEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVF 130
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
I S ++V +WN ++ GY MHG + AL F +M G +P ITF +L+ACSHAGL
Sbjct: 131 ERI--SNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGL 188
Query: 431 IDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ EG K F M + ++P+V+HY CMV++LGRAG L EA++++K M + + +WG LL
Sbjct: 189 VSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLL 248
Query: 490 LACRIHGEIA-----ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
ACR+HG IA A YL ++G +VL+SNIYAA+ W V ++R MK G +K
Sbjct: 249 GACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEK 308
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
S IE + F D +P +E+Y+ +E + +K GY P LHD+ED
Sbjct: 309 EPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQ 368
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L HSEKLA+AFG++ P +++ KNLRVC DCH+ + IS I RK+++RD N
Sbjct: 369 KERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRN 428
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 429 RFHHFVNGLCSCGDYW 444
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 136/249 (54%), Gaps = 4/249 (1%)
Query: 149 AALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL 208
A++ YAK G D+ +FD + RD + W VMI Y Q P E L+LF++ +
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLV 268
+ VT+++V SA GQ G + + VH Y N ++ + S++ MY++CG++E ARLV
Sbjct: 70 PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129
Query: 269 FDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSR 328
F+ + +D+++WNSM+ GY +G + +AL LF EM +P +T + +++AC++ G
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLV 189
Query: 329 QLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
G KF Y + I+ + + ++++ + G L+ A + ++ + V W L
Sbjct: 190 SEGWKFF-YSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPV-LWGTL 247
Query: 387 IAGYGMHGH 395
+ +HG+
Sbjct: 248 LGACRLHGN 256
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 19/271 (7%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y YG + AR LF+ + ++ + WN MI YA +G E L L+ M + +
Sbjct: 12 MITCYAKYGMIDEARVLFDGL--EERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N T VL AC + G+ VH I G + V +L+DMY+KCG +D V
Sbjct: 70 PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F+ +S +D+V+W M+ Y ++AL LF++ G +T + V +A G V
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLV 189
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSI------VAMYARCGNVEKA-RLVFDMMEKRDLISW 280
+ G+ + ++ I+ + V + R G +E+A LV +M +D + W
Sbjct: 190 SE-----GWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLW 244
Query: 281 NSMLT-----GYIQNGQASEALLLFDEMQNS 306
++L G I G+ L+ + NS
Sbjct: 245 GTLLGACRLHGNIALGEQIAEYLVSQNLANS 275
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/639 (34%), Positives = 347/639 (54%), Gaps = 46/639 (7%)
Query: 1 MRRLGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT 60
++ L T L+ C L L+ +H+ + GL Q L LG K++ +
Sbjct: 28 LQELKSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLG-KLVSSSVQLRDLRY 86
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A LF+ I + F++N +I+ Y+N+ +++L LY M GI N +T PFVLKAC
Sbjct: 87 AHKLFDQI--PQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKAC 144
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A+ S G VH + G S + VQ A++++Y CG +VFD++S R LVSW
Sbjct: 145 AAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWN 204
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MI Y + + EEA+++F++ Q+ GL D T+V + S + G+ + VH + +
Sbjct: 205 SMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVT 264
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY------------- 287
D + N+++ MYA+CGN++ A+ VFD M +D++SW M+ Y
Sbjct: 265 GIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFF 324
Query: 288 ------------------IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
+Q G +EA+ LF M +S N T + ++S+C+++G
Sbjct: 325 NQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLA 384
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
LG++ H YI ++N+ + ATL NA++DMYAKCG L TA ++F + E+N SWNV+I
Sbjct: 385 LGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGM--PEKNAVSWNVIIGA 442
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKP 448
+HG+G++A+E F +M GV PD ITFT +LSACSH+GL+D G+ F M + P
Sbjct: 443 LALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISP 502
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYL 503
+V+HYACMVD+LGR G L EA +IK+MP+ P+ VW ALL ACR +G +A L
Sbjct: 503 DVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQL 562
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA 563
+L ++G +VL+SN+Y+ S +W ++ + + + G+KK A S IE F
Sbjct: 563 LELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVD 622
Query: 564 DRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED 602
D+ + +Y + + +K AGY C DVE+
Sbjct: 623 DKRHGASTSIYSMLGQLMDHLKSAGY----PCKHLDVEE 657
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 344/632 (54%), Gaps = 31/632 (4%)
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
P+ A +L + SF +++R Y +G + + L+ M N ++ +L
Sbjct: 97 PDAAAALASIPFPPSVVSF--TSLLRGYVRHGLLADAIRLFQQMP----ERNHVSYTVLL 150
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
+ E + + ++ D A++ Y + G+ + +FDEM R++V
Sbjct: 151 GGLLDAGRVNEARRLFDEMPD----RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV 206
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA--VGQLGDVLKAQAVHG 235
SWT MI+ Y Q + A LF+ + +S + +V A V ++ A H
Sbjct: 207 SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHP 266
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
A CNA + + + G V+ A+ VF+ M +RD +W++M+ Y QN E
Sbjct: 267 VAACNAMM----------VGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLME 316
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL F EM +PN + + +++ C L GR+ H ++ + +D +A++
Sbjct: 317 ALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALIT 376
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KCG+LD A+ +F+ P +++ WN +I GY HG G +AL F M G+ PD
Sbjct: 377 MYIKCGNLDKAKRVFHTFEP--KDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDG 434
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
IT+ L+ACS+ G + EGR+ F MT S++P +HY+CMVD+LGR+G + EAFD+IK
Sbjct: 435 ITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIK 494
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
MP+ P+ +WGAL+ ACR+H E+AA L +LEP + G +VL+S+IY + +W +
Sbjct: 495 NMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWED 554
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRV-NPYWKEVYKKVESMAVEIKMAG 588
K+R+ + ++ L K S IEY K + F + D + +P + + +E + + +G
Sbjct: 555 ASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESG 614
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y D S LHD+++E + H L YHSE+ AVA+G++ + ++V KNLRVC DCHSA +
Sbjct: 615 YSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIK 674
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I+ I R+I++RDANRFHHF+ G CSC DYW
Sbjct: 675 LIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 18/262 (6%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N+ +A AR GN+E AR F+ M R S+N++L GY +N AL LF M + D
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL- 79
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ L+S + RQ + + +++ Y + G L A +
Sbjct: 80 ---ASYNALISGLSL--RRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRL 134
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F + ERN S+ VL+ G G +A F +M + D + +T++LS AG
Sbjct: 135 FQQM--PERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR----DVVAWTAMLSGYCQAG 188
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
I E R F +M K + V + M+ + G + A + + MP N+ W A+L
Sbjct: 189 RITEARALFDEMPKRN----VVSWTAMISGYAQNGEVNLARKLFEVMP-ERNEVSWTAML 243
Query: 490 LACRIHGEIA-ANYLFQLEPEH 510
+ G + A LF PEH
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEH 265
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L C LA L R++H+++ + A +I Y G + A+ +F++ +
Sbjct: 339 ILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSA-LITMYIKCGNLDKAKRVFHTF--E 395
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+WN+MI YA +G + L ++ MR +G+S + T+ L AC+ + EG+
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGRE 455
Query: 132 VHGDI-----IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA 185
+ + IR G ++ Y + +VD+ + G ++ + M V D V W ++ A
Sbjct: 456 IFNSMTVNSSIRPG--AEHY--SCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 186 YEQAEKPEEALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLK 229
E A + +K + G V + + ++VG+ D K
Sbjct: 512 CRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASK 557
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/544 (37%), Positives = 322/544 (59%), Gaps = 16/544 (2%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D+ L+ + G D ++F M VRD+VSW M++ ++ EEA +F
Sbjct: 79 DAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP 138
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+ +SV+ ++ S D+ A+ A D + ++V+ Y GNV
Sbjct: 139 ----VRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVV 191
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSAC 322
KA F+ M R+L+SWN+++ GY++N A +AL LF M + ++ +PN T ++ C
Sbjct: 192 KAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 251
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
+ L + G++ H + + + + T+ +++ MY KCGDL +A +F ++H R+V +
Sbjct: 252 SNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMH--TRDVVA 309
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
WN +I+GY HG G++A+ F +M +EGV+P+ ITF ++L+AC H GL D G +CF M
Sbjct: 310 WNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQ 369
Query: 443 KL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----G 496
+L ++P V HY+CMVD+L RAG L A D+I+ MP P+ S +G LL ACR++
Sbjct: 370 ELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFA 429
Query: 497 EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
E+AA L + +P+ G +V ++NIYA +N+W +V ++R MK+ + K +S IE
Sbjct: 430 ELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGV 489
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F + DR++P +++K+ +A +K GY+PDL LHDV++ + ML HSEKL
Sbjct: 490 MHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKL 549
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
A++FG+++ P +++ KNLRVC DCH+A + IS I R+II+RD RFHHF GG CSC
Sbjct: 550 AISFGLISTAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSC 609
Query: 677 NDYW 680
DYW
Sbjct: 610 GDYW 613
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 49 IIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGIS 107
++K Y E R+L + WN ++ Y N H + L L+ TM R + +
Sbjct: 190 VVKAIEYFEAMPVRNLVS-----------WNAVVAGYVKNSHADDALRLFRTMVREANVQ 238
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
N+ T VL C++ S + GK +H ++ + V +LV MY KCG CK+
Sbjct: 239 PNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKL 298
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
F EM RD+V+W MI+ Y Q +EA+ LF++ + EG+ + +T V+V +A G
Sbjct: 299 FGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 356
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 139/318 (43%), Gaps = 44/318 (13%)
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC-GNVEKARLVF 269
S++ V+VA+AV + GD+ A+ A + + N ++A YAR G + AR +F
Sbjct: 18 SLSTVAVAAAV-RRGDLTGAEE----AFASTPRKTTATYNCLLAGYARALGRLADARHLF 72
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
D + D +S+N++L+ + +G A A LF M D V+ +VS + G+ +
Sbjct: 73 DRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVRDV----VSWNTMVSGLSKSGAVE 128
Query: 330 LGRK----------------FHGYIINSNM------------KIDATLRNAVMDMYAKCG 361
+ G+ + +M K DA L A++ Y G
Sbjct: 129 EAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIG 188
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTS 420
++ A F + RN+ SWN ++AGY + H AL F M+ E V+P+ T +S
Sbjct: 189 NVVKAIEYFEAM--PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSS 246
Query: 421 ILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPP 480
+L CS+ + G++ KL + + +V M + G L A + +M
Sbjct: 247 VLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM--HT 304
Query: 481 NDSV-WGALLLACRIHGE 497
D V W A++ HG+
Sbjct: 305 RDVVAWNAMISGYAQHGD 322
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 14 QLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
+L C+ L++L +QIH L ++ L +G ++ Y G+ ++A LF +H
Sbjct: 246 SVLLGCSNLSALGFGKQIHQWCMKLPL-SRNLTVGTSLVSMYCKCGDLSSACKLFGEMHT 304
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
+ WN MI YA +G E + L+ M+ G+ N TF VL AC L
Sbjct: 305 RDVVA--WNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 357
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/585 (34%), Positives = 344/585 (58%), Gaps = 16/585 (2%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC 165
+++NS + +++A + + + VH +I T + + L+ +
Sbjct: 5 VAANSAAYEAIVRA---GPRVKQLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTH 61
Query: 166 KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+F + + D + +I + + P + +++ + + T SV + L
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
+ + VH +A+ + F D +Q ++V Y++CG++E AR VFD M ++ +++WNS+++
Sbjct: 122 ALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVS 181
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
G+ QNG A +A+ +F +M+ S +P+ T + L+SAC G+ LG H YI++ + +
Sbjct: 182 GFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDV 241
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ L A++++Y++CGD+ A +F+ + E NV++W +I+ YG HG+G++A++ F++
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKM--KETNVAAWTAMISAYGTHGYGKQAVDLFNK 299
Query: 406 MLEE-GVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRA 463
M ++ G P+++TF ++LSAC+HAGL+++GR + MT+ + P V+H+ C+VDMLGRA
Sbjct: 300 MEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRA 359
Query: 464 GCLYEAFDMIKQMPLPPN---DSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
G L EA+ I+Q+ N ++W A+L AC++H G A L LEPE+ G+ V
Sbjct: 360 GFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHV 419
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
++SNIYA S K EV +R+ M L+K +S+IE F D + E+Y+
Sbjct: 420 MLSNIYALSGKTDEVSHIRDRMMRNNLRKQVGYSIIEVENKTYLFSMGDESHQETGEIYR 479
Query: 576 KVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTK 635
+E++ K GY P +H VE+E++E L YHSEKLAVAFG++ T ++ + V K
Sbjct: 480 YLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLK-TVDSAITVVK 538
Query: 636 NLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
NLR+C DCHSAF++IS + R+IIVRD RFHHF+ G+CSC DYW
Sbjct: 539 NLRICEDCHSAFKYISIVSNRQIIVRDKLRFHHFQNGSCSCLDYW 583
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 219/428 (51%), Gaps = 12/428 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y+ ++++ + L+Q+H+ L + ++ L K+I + LF S+
Sbjct: 12 YEAIVRAGPRVKQLQQVHAHLIVTSY-GRSRSLLTKLITLACSARAIAYTHLLFLSVPLP 70
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
FL+N++I++ + + + Y M S +S ++YTF V+K+CA S + GK
Sbjct: 71 DD--FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKG 128
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH + +GF D+YVQAALV Y+KCG + +VFD M + +V+W +++ +EQ
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGL 188
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
E+A+ +F + ++ G DS T VS+ SA Q G + VH Y + ++ + +
Sbjct: 189 AEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTA 248
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK-- 309
++ +Y+RCG+V KAR VFD M++ ++ +W +M++ Y +G +A+ LF++M++ DC
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMED-DCGSI 307
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA-VMDMYAKCGDLDTAEN 368
PN VT + ++SAC + G + GR + + S I + ++DM + G LD A
Sbjct: 308 PNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYR 367
Query: 369 MFNDIHPSERNVSS--WNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHITFTSILSAC 425
+ + + W ++ MH + +E +++ E P H S + A
Sbjct: 368 FIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYAL 427
Query: 426 SHAGLIDE 433
S G DE
Sbjct: 428 S--GKTDE 433
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/522 (38%), Positives = 302/522 (57%), Gaps = 38/522 (7%)
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
I + G L + T V V A G VL+ + + +AI +L + N+++ MY
Sbjct: 18 IFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMY 77
Query: 257 ARCGNVEKARLVFDM-------------------------------MEKRDLISWNSMLT 285
A G V++AR VFD M +RD++SW +++
Sbjct: 78 ANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIA 137
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY+Q G EAL LF EM + PN T ++AC L + GR H YI S +K+
Sbjct: 138 GYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKM 197
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ L +++DMYAKCG++D A +F+D + + V WN +I GY MHG ++A++ F Q
Sbjct: 198 NERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQ 257
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAG 464
M E V P+ +TF ++L+ACSH L++EGR F M + ++PE++HY CMVD+LGR+G
Sbjct: 258 MKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSG 317
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSN 519
L EA + + MP+ P+ ++WGALL ACRIH G+ + +L+ +H G VL++N
Sbjct: 318 LLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLAN 377
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
+Y+AS +W E +R+ ++ G KK S IE F DR +P K++Y ++
Sbjct: 378 LYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDE 437
Query: 580 MAVEIKMAGYMPDLSCALHDVED-EDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
M ++K AGY+P+ L D++D ED+E L+ HSEKLA+AFG++N P +++ KNLR
Sbjct: 438 MTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLR 497
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH A +FIS +Y+R+IIVRD R+HHF+ G CSC DYW
Sbjct: 498 VCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 185/393 (47%), Gaps = 43/393 (10%)
Query: 99 STMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC 158
S +R SG N YTF FV KAC + +LEG+ + I+ G S+ +V A++ MYA
Sbjct: 21 SMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANW 80
Query: 159 GQTDDGCKV-------------------------------FDEMSVRDLVSWTVMITAYE 187
G D+ +V FDEMS RD+VSWT +I Y
Sbjct: 81 GLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYV 140
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
Q +EAL LF + Q G + T+ S +A L + + + +H Y + +
Sbjct: 141 QVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNER 200
Query: 248 IQNSIVAMYARCGNVEKARLVF--DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ S++ MYA+CG ++ A VF + K + WN+M+ GY +G++ EA+ LF++M+
Sbjct: 201 LLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKV 260
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLD 364
PN VT + L++AC++ + GR + + +S ++ + ++D+ + G L
Sbjct: 261 EKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLK 320
Query: 365 TA-ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILS 423
A E +FN P + + W L+ +H + + ++++E + DHI +L+
Sbjct: 321 EAEETVFN--MPMAPDATIWGALLGACRIHKDIERG-QRIGKIIKE-LDSDHIGCHVLLA 376
Query: 424 AC-SHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
S +G DE + A K+ V K C
Sbjct: 377 NLYSASGQWDEAK---AVRQKIEVSGRKKTPGC 406
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 128/252 (50%), Gaps = 8/252 (3%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
++Q L+ +I Y GE A+ +F+ + S W T+I Y G E L+L
Sbjct: 94 LDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVS--WTTIIAGYVQVGCFKEALDL 151
Query: 98 YSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK 157
+ M ++G N +T L ACA+ + +G+ +H I ++ + + A+L+DMYAK
Sbjct: 152 FHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAK 211
Query: 158 CGQTDDGCKVF-DEMSVRDLV-SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
CG+ D KVF DE ++ V W MI Y K +EA+ LF++ + E + + VT V
Sbjct: 212 CGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFV 271
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN--SIVAMYARCGNVEKA-RLVFDMM 272
++ +A G +++ + ++ +++ + I++ +V + R G +++A VF+M
Sbjct: 272 ALLNACSH-GKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMP 330
Query: 273 EKRDLISWNSML 284
D W ++L
Sbjct: 331 MAPDATIWGALL 342
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/466 (41%), Positives = 284/466 (60%), Gaps = 14/466 (3%)
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAM------YARCGNVEKARLVFDMMEKRDLISW 280
++ A+ G + L D + S+V++ YA+ G ++ AR++FD ME+RD + W
Sbjct: 99 IIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCW 158
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N M+ GY QNG +EAL+LF M + KPN VT L ++SAC LG+ + GR H YI N
Sbjct: 159 NVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN 218
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ ++ + + A++DMY+KCG L+ A +F+ I +++V +WN +I GY MHG ++AL
Sbjct: 219 NGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI--DDKDVVAWNSMIVGYAMHGFSQEAL 276
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDM 459
+ F M G+ P +ITF ILSAC H+G + EG F M + ++P+++HY CMV++
Sbjct: 277 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 336
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTGYF 514
LGRAG + +A++++K M + P+ +WG LL ACR+HG+IA L ++G +
Sbjct: 337 LGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTY 396
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
+L+SNIYAA W V +LR MK+ G+KK S IE + F +P KE+Y
Sbjct: 397 ILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIY 456
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
+E + +K GY P LHD+ + ++E L HSEKLA+AFG++N P +++
Sbjct: 457 MMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIV 516
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH + IS I RKI+VRD NRFHHF G+CSC DYW
Sbjct: 517 KNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 153/317 (48%), Gaps = 41/317 (12%)
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDM------YAKCGQTDDGCKVFDEMSVRDLVSW 179
I+ G + GD++ L D+ + +LV + YAK G+ D +FD M RD V W
Sbjct: 99 IIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCW 158
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
VMI Y Q P EAL+LF++ + + VT++SV SA GQLG + + VH Y
Sbjct: 159 NVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN 218
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
N ++ + ++V MY++CG++E ARLVFD ++ +D+++WNSM+ GY +G + EAL L
Sbjct: 219 NGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQL 278
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F M P +T + ++SAC + G G D++
Sbjct: 279 FKSMCRMGLHPTNITFIGILSACGHSGWVTEG----------------------WDIF-- 314
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
N D + E + + ++ G GH +A E M ++PD + +
Sbjct: 315 --------NKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNM---NIEPDPVLWG 363
Query: 420 SILSACSHAGLIDEGRK 436
++L AC G I G K
Sbjct: 364 TLLGACRLHGKIALGEK 380
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 141/319 (44%), Gaps = 48/319 (15%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y +GE + AR LF+ + ++ WN MI Y NG E L L+ M ++ N
Sbjct: 134 YAKHGELDAARVLFDGM--EERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEV 191
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T VL AC + G+ VH I G + +V ALVDMY+KCG +D VFD++
Sbjct: 192 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI 251
Query: 172 SVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+D+V+W MI Y +EAL LF+ + GL ++T + + SA G G V +
Sbjct: 252 DDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTE-- 309
Query: 232 AVHGYAICNAFLEDLCIQNSI------VAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
G+ I N ++ I+ I V + R G+VE+A
Sbjct: 310 ---GWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQA-------------------- 346
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
++ ++N + +P+PV L+ AC G LG K +++ N+
Sbjct: 347 --------------YELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLAN 392
Query: 346 DATLRNAVMDMYAKCGDLD 364
T + ++YA G+ D
Sbjct: 393 SGTYI-LLSNIYAAVGNWD 410
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/424 (42%), Positives = 277/424 (65%), Gaps = 7/424 (1%)
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
E A VF++M ++D+++WNS++ G+ NG+ +EAL L+ M + +P+ T + L+SAC
Sbjct: 58 ESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSAC 117
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSS 382
L + LGR+ H Y++ + + NA++D+YAKCG + A +F+++ ERNV S
Sbjct: 118 AELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEM-GIERNVVS 176
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
W LI G ++G G++ALE F M EG+ P ITF +L ACSH G+++EG + F M
Sbjct: 177 WTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMK 236
Query: 443 -KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--- 498
+ + P ++HY CMVD+LGRAG L EA+D I+ MPL PN +W LL AC IHG +
Sbjct: 237 EQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLG 296
Query: 499 --AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
A L QLEP+ +G +VL+SN+YA+ +W +V ++R M ++G++K +S++E G
Sbjct: 297 AFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNH 356
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
+ F DR +P + +YK + MA+++K+AGY+P + L D+E+E++E L YHSEK+
Sbjct: 357 VHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKI 416
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
A+AF ++N P +++ KNLRVC DCH A + IS ++ R I+VRD +RFHHF G+CSC
Sbjct: 417 AIAFMLINTLPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSCSC 476
Query: 677 NDYW 680
DYW
Sbjct: 477 RDYW 480
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 141/296 (47%), Gaps = 37/296 (12%)
Query: 133 HGDIIRTGFLSDSYVQAALVDMYAKC--GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
H ++ G S YV ++ Y+KC G + CK+FDEM +D V+ MITAY ++
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAYFESA 60
Query: 191 --------------------------KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQL 224
KP EAL L+++ EG+ D T+VS+ SA +L
Sbjct: 61 YKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAEL 120
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME-KRDLISWNSM 283
++ + H Y + ++L N+++ +YA+CG + +AR +FD M +R+++SW S+
Sbjct: 121 ATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSL 180
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ G NG EAL F +M+ P+ +T + ++ AC++ G G + Y
Sbjct: 181 IVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFE---YFKRMKE 237
Query: 344 KIDATLR----NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
+ D R ++D+ + G L A + D+ P + N W L+ +HGH
Sbjct: 238 QYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDM-PLQPNAVIWRTLLGACTIHGH 292
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 138/331 (41%), Gaps = 51/331 (15%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN++I +A NG E L LY M G+ + +T +L ACA + ++ G+ H ++
Sbjct: 75 WNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMV 134
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV-RDLVSWTVMITAYEQAEKPEEAL 196
+ G + + AL+D+YAKCG + K+FDEM + R++VSWT +I +EAL
Sbjct: 135 KVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEAL 194
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
F+ ++EGL+ +T V V A G I N +
Sbjct: 195 EHFKDMEREGLVPSEITFVGVLYACSHCG----------------------IVNEGFEYF 232
Query: 257 ARCGNVEKARLVFDMMEKRDLIS----WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
R M E+ D++ + M+ + G EA +D +Q+ +PN
Sbjct: 233 KR------------MKEQYDIVPRIEHYGCMVDLLGRAGLLKEA---YDYIQDMPLQPNA 277
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
V L+ ACT G LG ++ K Y +L +E ++D
Sbjct: 278 VIWRTLLGACTIHGHLGLGAFARARLLQLEPKDSGD--------YVLLSNLYASEQRWSD 329
Query: 373 IHPSERNVSSWNVL-IAGYGMHGHGRKALEF 402
+H R + S V GY + G EF
Sbjct: 330 VHEVRRTMLSEGVRKTPGYSLVELGNHVHEF 360
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/662 (33%), Positives = 362/662 (54%), Gaps = 17/662 (2%)
Query: 12 YDQLLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNS 67
+ LL CN ++ Q+H+ G +++K Y + A LF
Sbjct: 144 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEE 203
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I + S +F NT+I Y +G E + L+ MR+SG + +TF VLKA
Sbjct: 204 ILDKDSVTF--NTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFA 261
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +HG + TGF D+ V ++ Y+K + + +F+EM D VS+ V+I++Y
Sbjct: 262 LGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYS 321
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
QAE+ EE+L LF++ Q G + ++ S L + + VH AI L
Sbjct: 322 QAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILH 381
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ NS+V MYA+C ++A L+F + +R +SW ++++GY+Q G L LF +M+ ++
Sbjct: 382 VGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGAN 441
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+ + T ++ A S LG++ H +II S + + ++DMYAKCG + A
Sbjct: 442 LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 501
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F ++ +RN SWN LI+ Y +G G A+ F++M++ G++PD ++ +L ACSH
Sbjct: 502 QVFEEM--PDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSH 559
Query: 428 AGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
G +++G + F M+ + + P+ KHYACM+D+LGR G EA ++ +MP P++ +W
Sbjct: 560 CGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 619
Query: 487 ALLLACRIH-----GEIAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
++L ACRI+ E AA LF +E +V MSNIYAA+ KW V +++ M+ +
Sbjct: 620 SVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRER 679
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK A+S +E I F + D+ +P E+ KK+ + EI+ GY PD S + D+
Sbjct: 680 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDI 739
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKII 659
+++ + L YHSE+LAVAF +++ TPE + V KNLR C DCH+A + IS I +R I
Sbjct: 740 DEQMKIESLKYHSERLAVAFALIS-TPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVIT 798
Query: 660 VR 661
+
Sbjct: 799 TQ 800
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 229/459 (49%), Gaps = 21/459 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y G+ ++AR LF+++ + + W ++ YA N H E +L+ M RS
Sbjct: 81 MISGYVKMGDLSSARHLFDAMPDRTVVT--WTILMGWYAGNNHFDEAFKLFRQMCRSCTL 138
Query: 108 SNSYTFPFVLKACASNSLILEGKV--VHGDIIRTGFLSDSYVQA--ALVDMYAKCGQTDD 163
+ TF +L C N + + V VH ++ GF ++ ++ L+ Y + + D
Sbjct: 139 PDYVTFTTLLPGC--NDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDL 196
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
C +F+E+ +D V++ +IT YE+ EA+ LF K +Q G T V AV
Sbjct: 197 ACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVG 256
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
L D Q +HG ++ F D + N I+ Y++ V + R +F+ M + D +S+N +
Sbjct: 257 LHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVV 316
Query: 284 LTGYIQNGQASEALLLFDEMQ--NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
++ Y Q Q E+L LF EMQ D + P ++ ++A L S Q+GR+ H I +
Sbjct: 317 ISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAA--NLSSLQVGRQVHCQAIVA 374
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY---GMHGHGRK 398
+ N+++DMYAKC D AE +F + S+R+ SW LI+GY G+HG G
Sbjct: 375 TADSILHVGNSLVDMYAKCEMFDEAELIFKSL--SQRSTVSWTALISGYVQKGLHGAG-- 430
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
L+ F++M ++ D TF ++L A + + G++ A + + V + +VD
Sbjct: 431 -LKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVD 489
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
M + G + +A + ++MP N W AL+ A +G+
Sbjct: 490 MYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAYADNGD 527
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 171/391 (43%), Gaps = 36/391 (9%)
Query: 132 VHGDIIRTGFLSDS--------------YVQAAL-----------------VDMYAKCGQ 160
V II+TGF +D+ V AAL + Y K G
Sbjct: 31 VDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGD 90
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
+FD M R +V+WT+++ Y +EA LF++ + L D VT ++
Sbjct: 91 LSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPG 150
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQ--NSIVAMYARCGNVEKARLVFDMMEKRDLI 278
VH +A+ F +L + N ++ Y ++ A ++F+ + +D +
Sbjct: 151 CNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSV 210
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
++N+++TGY ++G +EA+ LF +M+ S KP+ T ++ A L LG++ HG
Sbjct: 211 TFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLS 270
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ + DA++ N ++ Y+K + N+FN++ E + S+NV+I+ Y +
Sbjct: 271 VTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEM--PELDFVSYNVVISSYSQAEQYEE 328
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
+L F +M G + F ++LS ++ + GR+ + + +VD
Sbjct: 329 SLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVD 388
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
M + EA + K + S W AL+
Sbjct: 389 MYAKCEMFDEAELIFKSLSQRSTVS-WTALI 418
>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 654
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/593 (36%), Positives = 334/593 (56%), Gaps = 28/593 (4%)
Query: 112 TFPFVLKACASN-------SLILEGKVVHGDIIRTGFLS--DSYVQA-ALVDMYAKCGQT 161
F +LKA +S+ S + G +H + GFL DS + A A++ YA C +
Sbjct: 66 AFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREP 125
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG--LLSDSVTIVSVAS 219
D KVFD M R+ V+W +I Y QA + EEA++LF+ ++EG + D T ++ S
Sbjct: 126 DLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLS 185
Query: 220 AVGQLGDVLK----AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
+G+ G + A+H + I D + S+V++YA +E A++ FD +
Sbjct: 186 GIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSS 245
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
D I W+SM++ Y+ + ALL+F M D KP + S C +G ++G++ H
Sbjct: 246 DPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVH 305
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF--NDIHPSERNVSSWNVLIAGYGMH 393
+ + SN + DA + NA++ MY+ CG ++ A+ +F ND NV S+N +I+ G H
Sbjct: 306 AHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDC----VNVISYNSMISALGQH 361
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKH 452
G+ ++ALE F QM G+ PD +T +++S+ +HAGL+ EG + F M + +KP +H
Sbjct: 362 GYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQH 421
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLE 507
YAC+VDML R+G + +A I +MP +W +L AC H G+ A LF++E
Sbjct: 422 YACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFEME 481
Query: 508 PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN 567
P ++L+ NIYA +W E K+R M +G+ K AFS IE G+ F DR +
Sbjct: 482 PYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSH 541
Query: 568 PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTP 627
P +E+Y+ ++ + IK+AGY+PD+S A H+++ + +E L YH EKLA AFG +
Sbjct: 542 PISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPS 601
Query: 628 EAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLRVC DCH A+++ S + R+II+RD RFHHF G CSC DYW
Sbjct: 602 GGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCSCGDYW 654
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 192/392 (48%), Gaps = 15/392 (3%)
Query: 27 QIHSSLTTSGLI--NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
Q+H+ G + + + L ++ Y + EP+ AR +F+ + + + WN +I+
Sbjct: 92 QLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGM--PRRNAVTWNALIKG 149
Query: 85 YANNGHCVETLELYSTMRRSG--ISSNSYTFPFVL----KACASNSLILEGKVVHGDIIR 138
YA G E + L+ M+R G ++ + YTFP +L + S + G +H +I+
Sbjct: 150 YAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVIK 209
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G D +V A+LV +YA +D FD++ D + W+ MI+AY E+ E AL++
Sbjct: 210 AGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLI 269
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F + + +V S G++G + + VH +++ + +D + N+++ MY+
Sbjct: 270 FFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSD 329
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG + A+ VF + ++IS+NSM++ Q+G EAL F +M+ + P+ VT L L
Sbjct: 330 CGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNL 389
Query: 319 VSACTYLGSRQLG-RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+S+ + G G + F+ + +K V+DM A+ G++ A N++ P E
Sbjct: 390 ISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEM-PFE 448
Query: 378 RNVSSWNVLIAGYGMHGH---GRKALEFFSQM 406
W +++ H G++ E +M
Sbjct: 449 AEAPLWRIVLGACSKHRDIETGKRIAEMLFEM 480
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/551 (35%), Positives = 321/551 (58%), Gaps = 9/551 (1%)
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+I GF D Y++ ++ M+ KCG D ++FDEM R+LVSW +I+ EA
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
LF +E + S T + A L + + +H + +D+ + +++ M
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y++CG++E AR VF+ M ++ + WN+++ GY +G + EAL ++ EM++S K + T
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++V C L S + ++ H +I D A++D Y+K G ++ A ++F+ +
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKM-- 238
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+ +NV SWN LI GYG HG G +A+E F QM++E + P+HITF ++LSACSH+GL + G
Sbjct: 239 ASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGW 298
Query: 436 KCFADMTKLS-VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F M + + +KP HYACM++++GR G L EA +I+ P P ++W ALL ACR+
Sbjct: 299 EIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRV 358
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
+ G+ AA L+ +EP+ ++++ NIY ++ +E + +K KGL+ S
Sbjct: 359 NENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCS 418
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE + F + D +P KE+Y+KV+ + +EI GY+P+ L DV DE E +
Sbjct: 419 WIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDV-DEQEERVR 477
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
YHSEKLA+AFG+++ A +Q+ + R+C DCH A + I+ + R+I++RDA RFHHF
Sbjct: 478 LYHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHF 537
Query: 670 EGGTCSCNDYW 680
+ G CSC DYW
Sbjct: 538 KHGHCSCEDYW 548
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 171/342 (50%), Gaps = 4/342 (1%)
Query: 47 KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGI 106
++++ + G AR LF+ + S WNT+I + G +E L+ M
Sbjct: 15 RVLLMHVKCGMMIDARRLFDEMPERNLVS--WNTIISGLVDVGDFMEAFRLFLNMWEEFS 72
Query: 107 SSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCK 166
+ S+TF +++A A LI G+ +H ++ G D +V AL+DMY+KCG +D
Sbjct: 73 DAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARF 132
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
VF+EM + V W +I Y EEAL ++ + + G+ D T + +L
Sbjct: 133 VFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLAS 192
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
V A+ H I + F D+ ++V Y++ G +E AR VFD M +++ISWN+++ G
Sbjct: 193 VEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGG 252
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKI 345
Y +G+ SEA+ LF++M PN +T L ++SAC++ G + G + F ++ +K
Sbjct: 253 YGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKP 312
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLI 387
A ++++ + G LD A + P + + W L+
Sbjct: 313 RAMHYACMIELMGREGLLDEALALIRGA-PFKPTANMWAALL 353
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/556 (35%), Positives = 333/556 (59%), Gaps = 9/556 (1%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
VH +I +G+ ++ L+++ G ++F + D +T +I + +
Sbjct: 31 VHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHN 90
Query: 192 -PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+L + + + + T SV + L + + +HG+ + N F D+ +Q
Sbjct: 91 FSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQT 150
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++++ Y +CG + AR VFD M R +++WNSM++GY QNG A EA+ LFD M+ +P
Sbjct: 151 ALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEP 210
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
N T + ++SAC +LG+ LG H Y + + + ++ L ++++MY +CG++ A +F
Sbjct: 211 NSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVF 270
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGL 430
+ + ERNV +W +I+GYG +G+G +A+E F +M G+ P+ ITF ++LSAC+HAGL
Sbjct: 271 DSM--KERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGL 328
Query: 431 IDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
++EGR+ F M + + PEV+H+ C+VDMLGRAG L EA++ IK++ P ++W A+L
Sbjct: 329 VNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAML 388
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
AC++H G A + EP + ++V++SNIYA + + +V +R++M K LKK
Sbjct: 389 GACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKK 448
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
+S I+ + F D+ + E+Y ++ + + + AGY+ +H++E+E+
Sbjct: 449 QVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEE 508
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
RE+ L YHSEKLA+AFG++ + V+++ KNLR+C DCHSA ++IS I R+IIVRD
Sbjct: 509 REYALGYHSEKLAIAFGLLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKL 568
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF+ G+CSC DYW
Sbjct: 569 RFHHFKNGSCSCLDYW 584
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 235/444 (52%), Gaps = 13/444 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y+ LL++ L L Q+H+ + SG + L K++ G + R +F + N
Sbjct: 15 YNLLLQAGPRLKLLHQVHAHVIVSGY-GCSRFLLTKLLNLACAAGSISYTRQIFLIVPNP 73
Query: 72 KSYSFLWNTMIRAYAN-NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
S FL+ ++IR+ + + V +L Y+ M S ++ ++YTF V+K+CA + G+
Sbjct: 74 DS--FLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGR 131
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
++HG ++ GF SD YVQ AL+ Y KCG + KVFD+M R +V+W MI+ YEQ
Sbjct: 132 IIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNG 191
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
+EA+ LF + ++ G+ +S T VSV SA LG + VH YA+ N ++ +
Sbjct: 192 FAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGT 251
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
S++ MY RCGNV KAR VFD M++R++++W +M++GY NG S+A+ LF EM+ + P
Sbjct: 252 SLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLP 311
Query: 311 NPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N +T + ++SAC + G GR+ F + + ++DM + G LD A N
Sbjct: 312 NSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNF 371
Query: 370 FNDIHPSERNVSSWNVLIAGYGMH---GHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+IH E + W ++ MH G G + E ++ E P H S + A
Sbjct: 372 IKEIH-EEPAPAIWTAMLGACKMHKNFGLGAQVAE--HRLASEPGNPAHYVILSNIYAL- 427
Query: 427 HAGLIDEGRKCFADMTKLSVKPEV 450
AG +D+ +M + +K +V
Sbjct: 428 -AGRMDQVEMVRDNMIRKCLKKQV 450
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 233/664 (35%), Positives = 357/664 (53%), Gaps = 56/664 (8%)
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMR-RSGISSNSYTFPFVL 117
+ AR++F+ I + L+ M+ AYA N E ++L+ + + +S NS ++
Sbjct: 72 DEARAIFDQI--PTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNS-----II 124
Query: 118 KACASNSLILEGK----------VVHGDIIRTGFLSDSYVQAA----------------- 150
K C I+ + VV + G L VQ A
Sbjct: 125 KGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAW 184
Query: 151 --LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLL 208
++ Y G+ DD ++F +M RD++SW+ MI + K E+AL+LF+ G+
Sbjct: 185 NAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVC 244
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-----DLCIQNSIVAMYARCGNVE 263
S +V SA ++ +H C+ F D + S+V YA C +E
Sbjct: 245 LSSGVLVCGLSAAAKIPAWRVGIQIH----CSVFKLGDWHFDEFVSASLVTFYAGCKQME 300
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
A VF + + ++ W ++LTGY N + EAL +F EM D PN + +++C
Sbjct: 301 AACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCC 360
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + G+ H + ++ + +++ MY+KCG + A +F I+ E+NV SW
Sbjct: 361 GLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGIN--EKNVVSW 418
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-- 441
N +I G HG G AL F+QML EGV PD IT T +LSACSH+G++ + R CF
Sbjct: 419 NSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKAR-CFFRYFG 477
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--- 498
K SV ++HY MVD+LGR G L EA ++ MP+ N VW ALL ACR H +
Sbjct: 478 QKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLA 537
Query: 499 --AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKD 556
AAN +F++EP+ + +VL+SN+YA+S++W EV +R MK+ G+ K S +
Sbjct: 538 KRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQ 597
Query: 557 IQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKL 616
F +ADR +P +++Y+K+E + V++K GY+PD ALHDVE E +E ML+YHSE+L
Sbjct: 598 KHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERL 657
Query: 617 AVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSC 676
A+AFG+++ + + V KNLRVC DCH+A + ++ I R+I+VRD++RFH F+ G CSC
Sbjct: 658 AIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSC 717
Query: 677 NDYW 680
DYW
Sbjct: 718 GDYW 721
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 6/263 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
QIH S+ G + + A ++ Y + A +F + +W ++ Y
Sbjct: 268 QIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSV--VIWTALLTGYG 325
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
N E LE++ M R + N +F L +C I GKV+H ++ G S Y
Sbjct: 326 LNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGY 385
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG 206
V +LV MY+KCG D VF ++ +++VSW +I Q AL LF + +EG
Sbjct: 386 VGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREG 445
Query: 207 LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN--SIVAMYARCGNVEK 264
+ D +T+ + SA G + KA+ Y L I++ S+V + RCG +E+
Sbjct: 446 VDPDGITVTGLLSACSHSGMLQKARCFFRY-FGQKRSVTLTIEHYTSMVDVLGRCGELEE 504
Query: 265 AR-LVFDMMEKRDLISWNSMLTG 286
A +V M K + + W ++L+
Sbjct: 505 AEAVVMSMPMKANSMVWLALLSA 527
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
++++AR +FD + + + ML Y QN + EA+ LF + D V+ ++
Sbjct: 70 SLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDV----VSWNSIIK 125
Query: 321 ACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
C + G RK + + TL + ++ + G + AE +F + P +R+V
Sbjct: 126 GCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLL----RLGIVQEAETLFWAMEPMDRDV 181
Query: 381 SSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
++WN +I GY +G AL+ F QM D I+++S+++ H G ++ F D
Sbjct: 182 AAWNAMIHGYCSNGRVDDALQLFCQMPSR----DVISWSSMIAGLDHNGKSEQALVLFRD 237
Query: 441 MTKLSV 446
M V
Sbjct: 238 MVASGV 243
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/587 (36%), Positives = 319/587 (54%), Gaps = 43/587 (7%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +R G D V L YA + D + V +T I A+
Sbjct: 54 LHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGL 113
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
AL L + GL+ S T+ S A L +A+H YA A D + +
Sbjct: 114 HLAALALLSEMLGRGLIPTSHTLSSSLPACHGLA---LGRALHAYAFKLALAGDSYVATA 170
Query: 252 IVAMYARCGNVEKARLVFDMME-------------------------------KRDLISW 280
++ MYAR G+ + AR +FD M +D I W
Sbjct: 171 LLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICW 230
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N+M+ GY Q+G+ +EAL LF M S P+ V ++ +SA LG+ + GR H Y+ N
Sbjct: 231 NAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKN 290
Query: 341 SN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
S ++++A + A++DMY KCG L+ A ++FN I ++++ WN +I GY MHG RKA
Sbjct: 291 SRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSI--GDKDIVVWNAMINGYAMHGDSRKA 348
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVD 458
LE FSQ+ +G+ P ITF +L+ACSH+GL+DEG + F M + ++ P+++HY CMVD
Sbjct: 349 LEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVD 408
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LGRAG + EAF +++ M + P+ +W +LL ACR+H G+ A+YL ++G
Sbjct: 409 LLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGM 468
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
++L+SNIYAA W EV ++R MK G++K S IE G+ + F D +P E+
Sbjct: 469 YILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEI 528
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
Y +E M +K G++P LHD+++ +E L HSEKLAVAFG+++ P +++
Sbjct: 529 YAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKI 588
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR C DCH+ + IS I RKI+ RD NRFHHF G+C+C DYW
Sbjct: 589 VKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 635
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 164/352 (46%), Gaps = 38/352 (10%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL C L ++H++ +G ++ +G ++ Y + +L + D +
Sbjct: 41 LLTGCATLRRTGELHAAAVRAG-VDGDRAVGFRLQRAYAASDRLDLTVTLLR-LTPDPTT 98
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
F + + I A+++ G + L L S M G+ S+T L AC +L G+ +H
Sbjct: 99 VF-YTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLAL---GRALHA 154
Query: 135 DIIRTGFLSDSYVQAALVDMYA-------------------------------KCGQTDD 163
+ DSYV AL+ MYA K G DD
Sbjct: 155 YAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDD 214
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
++FD M +D + W MI Y Q +P EAL LF+ + G+ D V I+ SAV Q
Sbjct: 215 ARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQ 274
Query: 224 LGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
LG + +H Y + ++ + + +++ MY +CG++E A VF+ + +D++ WN+
Sbjct: 275 LGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNA 334
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
M+ GY +G + +AL +F ++++ P +T + L++AC++ G G +F
Sbjct: 335 MINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF 386
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 17/242 (7%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTMRRSGISSNS 110
Y G + AR LF+ + S F+ WN MI Y +G E L L+ M RSG+ +
Sbjct: 206 YAKMGALDDARELFDGM---PSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDE 262
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFD 169
L A A G+ +H + + + ++ V AL+DMY KCG +D VF+
Sbjct: 263 VAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFN 322
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
+ +D+V W MI Y +AL +F + + +GL +T + + +A G V +
Sbjct: 323 SIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDE 382
Query: 230 AQAVHGYAICNAFLEDLCIQNSI------VAMYARCGNVEKA-RLVFDMMEKRDLISWNS 282
G+ + E+ I I V + R G +E+A LV M D + W S
Sbjct: 383 -----GHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVS 437
Query: 283 ML 284
+L
Sbjct: 438 LL 439
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 123/326 (37%), Gaps = 40/326 (12%)
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
QQ G+L T VA + + + +H A+ D + + YA +
Sbjct: 28 QQHGVL----TADRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRL 83
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
+ + + + + S + + G AL L EM P T + AC
Sbjct: 84 DLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPAC 143
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH-------- 374
L LGR H Y + D+ + A++ MYA+ GD D A +F+++
Sbjct: 144 HGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVT 200
Query: 375 ----------------------PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
PS ++ WN +I GY HG +AL F ML GV
Sbjct: 201 AMLTCYAKMGALDDARELFDGMPS-KDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVD 259
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PD + LSA + G + GR + + V+ + ++DM + G L +A
Sbjct: 260 PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVS 319
Query: 472 MIKQMPLPPNDSVWGALLLACRIHGE 497
+ + + VW A++ +HG+
Sbjct: 320 VFNSIG-DKDIVVWNAMINGYAMHGD 344
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 24 SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
S R +HS + S + +G +I Y G A S+FNSI DK +WN MI
Sbjct: 280 SGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSI-GDKDI-VVWNAMIN 337
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT-GFL 142
YA +G + LE++S +R G+ TF +L AC+ + L+ EG + +
Sbjct: 338 GYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIV 397
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA 185
+VD+ + G ++ + M++ D V W ++ A
Sbjct: 398 PKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAA 441
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/587 (36%), Positives = 319/587 (54%), Gaps = 43/587 (7%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +R G D V L YA + D + V +T I A+
Sbjct: 53 LHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGL 112
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
AL L + GL+ S T+ S A L +A+H YA A D + +
Sbjct: 113 HLAALALLSEMLGRGLIPTSHTLSSSLPACHGLA---LGRALHAYAFKLALAGDSYVATA 169
Query: 252 IVAMYARCGNVEKARLVFDMME-------------------------------KRDLISW 280
++ MYAR G+ + AR +FD M +D I W
Sbjct: 170 LLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICW 229
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N+M+ GY Q+G+ +EAL LF M S P+ V ++ +SA LG+ + GR H Y+ N
Sbjct: 230 NAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKN 289
Query: 341 SN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
S ++++A + A++DMY KCG L+ A ++FN I ++++ WN +I GY MHG RKA
Sbjct: 290 SRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSI--GDKDIVVWNAMINGYAMHGDSRKA 347
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVD 458
LE FSQ+ +G+ P ITF +L+ACSH+GL+DEG + F M + ++ P+++HY CMVD
Sbjct: 348 LEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVD 407
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LGRAG + EAF +++ M + P+ +W +LL ACR+H G+ A+YL ++G
Sbjct: 408 LLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGM 467
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
++L+SNIYAA W EV ++R MK G++K S IE G+ + F D +P E+
Sbjct: 468 YILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEI 527
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
Y +E M +K G++P LHD+++ +E L HSEKLAVAFG+++ P +++
Sbjct: 528 YAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKI 587
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR C DCH+ + IS I RKI+ RD NRFHHF G+C+C DYW
Sbjct: 588 VKNLRACADCHAVLKLISKITGRKIVFRDRNRFHHFVDGSCTCGDYW 634
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 164/352 (46%), Gaps = 38/352 (10%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
LL C L ++H++ +G ++ +G ++ Y + +L + D +
Sbjct: 40 LLTGCATLRRTGELHAAAVRAG-VDGDRAVGFRLQRAYAASDRLDLTVTLLR-LTPDPTT 97
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
F + + I A+++ G + L L S M G+ S+T L AC +L G+ +H
Sbjct: 98 VF-YTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLAL---GRALHA 153
Query: 135 DIIRTGFLSDSYVQAALVDMYA-------------------------------KCGQTDD 163
+ DSYV AL+ MYA K G DD
Sbjct: 154 YAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDD 213
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
++FD M +D + W MI Y Q +P EAL LF+ + G+ D V I+ SAV Q
Sbjct: 214 ARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQ 273
Query: 224 LGDVLKAQAVHGYAICNAFLE-DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
LG + +H Y + ++ + + +++ MY +CG++E A VF+ + +D++ WN+
Sbjct: 274 LGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNA 333
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF 334
M+ GY +G + +AL +F ++++ P +T + L++AC++ G G +F
Sbjct: 334 MINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQF 385
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 17/242 (7%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFL-WNTMIRAYANNGHCVETLELYSTMRRSGISSNS 110
Y G + AR LF+ + S F+ WN MI Y +G E L L+ M RSG+ +
Sbjct: 205 YAKMGALDDARELFDGM---PSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDE 261
Query: 111 YTFPFVLKACASNSLILEGKVVHGDIIRTGFLS-DSYVQAALVDMYAKCGQTDDGCKVFD 169
L A A G+ +H + + + ++ V AL+DMY KCG +D VF+
Sbjct: 262 VAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFN 321
Query: 170 EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLK 229
+ +D+V W MI Y +AL +F + + +GL +T + + +A G V +
Sbjct: 322 SIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDE 381
Query: 230 AQAVHGYAICNAFLEDLCIQNSI------VAMYARCGNVEKA-RLVFDMMEKRDLISWNS 282
G+ + E+ I I V + R G +E+A LV M D + W S
Sbjct: 382 -----GHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVS 436
Query: 283 ML 284
+L
Sbjct: 437 LL 438
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 123/326 (37%), Gaps = 40/326 (12%)
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
QQ G+L T VA + + + +H A+ D + + YA +
Sbjct: 27 QQHGVL----TADRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRL 82
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
+ + + + + S + + G AL L EM P T + AC
Sbjct: 83 DLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPAC 142
Query: 323 TYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH-------- 374
L LGR H Y + D+ + A++ MYA+ GD D A +F+++
Sbjct: 143 HGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVT 199
Query: 375 ----------------------PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
PS ++ WN +I GY HG +AL F ML GV
Sbjct: 200 AMLTCYAKMGALDDARELFDGMPS-KDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVD 258
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
PD + LSA + G + GR + + V+ + ++DM + G L +A
Sbjct: 259 PDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVS 318
Query: 472 MIKQMPLPPNDSVWGALLLACRIHGE 497
+ + + VW A++ +HG+
Sbjct: 319 VFNSIG-DKDIVVWNAMINGYAMHGD 343
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 24 SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
S R +HS + S + +G +I Y G A S+FNSI DK +WN MI
Sbjct: 279 SGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSI-GDKDI-VVWNAMIN 336
Query: 84 AYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT-GFL 142
YA +G + LE++S +R G+ TF +L AC+ + L+ EG + +
Sbjct: 337 GYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIV 396
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA 185
+VD+ + G ++ + M++ D V W ++ A
Sbjct: 397 PKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAA 440
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/632 (34%), Positives = 343/632 (54%), Gaps = 31/632 (4%)
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
P+ A +L + SF +++R Y +G + + L+ M N ++ +L
Sbjct: 97 PDAAAALASIPFPPSVVSF--TSLLRGYVRHGLLADAIRLFQQMP----ERNHVSYTVLL 150
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
+ E + + ++ D A++ Y + G+ + +FDEM R++V
Sbjct: 151 GGLLDAGRVNEARRLFDEMPD----RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV 206
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA--VGQLGDVLKAQAVHG 235
SWT MI+ Y Q + A LF+ + +S + +V A V ++ A H
Sbjct: 207 SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHP 266
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
A CNA + + + G V+ A+ VF+ M +RD +W++M+ Y QN E
Sbjct: 267 VAACNAMM----------VGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLME 316
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL F EM +PN + + +++ C L GR+ H ++ + +D +A++
Sbjct: 317 ALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALIT 376
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KCG+LD A+ +F+ P +++ WN +I GY HG G +AL F M G+ PD
Sbjct: 377 MYIKCGNLDKAKRVFHTFEP--KDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDG 434
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
IT+ L+ACS+ G + EGR+ F MT S++P +HY+CMVD+LGR+G + EAFD+IK
Sbjct: 435 ITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIK 494
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
MP+ P+ +WGAL+ ACR+H E AA L +LEP + G +VL+S+IY + +W +
Sbjct: 495 NMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWED 554
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRV-NPYWKEVYKKVESMAVEIKMAG 588
K+R+ + ++ L K S IEY K + F + D + +P + + +E + + +G
Sbjct: 555 ASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESG 614
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y D S LHD+++E + H L YHSE+ AVA+G++ + ++V KNLRVC DCHSA +
Sbjct: 615 YSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIK 674
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I+ I R+II+RDANRFHHF+ G CSC DYW
Sbjct: 675 LIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 18/262 (6%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N+ +A AR GN+E AR F+ M R S+N++L GY +N AL LF M + D
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL- 79
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ L+S + RQ + + +++ Y + G L A +
Sbjct: 80 ---ASYNALISGLSL--RRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRL 134
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F + ERN S+ VL+ G G +A F +M + D + +T++LS AG
Sbjct: 135 FQQM--PERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR----DVVAWTAMLSGYCQAG 188
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
I E R F +M K + V + M+ + G + A + + MP N+ W A+L
Sbjct: 189 RITEARALFDEMPKRN----VVSWTAMISGYAQNGEVNLARKLFEVMP-ERNEVSWTAML 243
Query: 490 LACRIHGEIA-ANYLFQLEPEH 510
+ G + A LF PEH
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEH 265
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L C LA L R++H+++ + A +I Y G + A+ +F++ +
Sbjct: 339 ILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSA-LITMYIKCGNLDKAKRVFHTF--E 395
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+WN+MI YA +G + L ++ MR +G+S + T+ L AC+ + EG+
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGRE 455
Query: 132 VHGDI-----IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA 185
+ + IR G ++ Y + +VD+ + G ++ + M V D V W ++ A
Sbjct: 456 IFNSMTVNSSIRPG--AEHY--SCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 186 YEQAEKPEEALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLK 229
E A +K + G V + + ++VG+ D K
Sbjct: 512 CRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASK 557
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/601 (35%), Positives = 338/601 (56%), Gaps = 43/601 (7%)
Query: 91 CVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAA 150
C T +L S SN+ +L+ C++ + E + +HG +++TG + D +
Sbjct: 6 CTPTSQLSS-------ESNAAQTLHLLQRCSN---MEELRQIHGQMLKTGLILDEIPASK 55
Query: 151 LVDMYAKCGQTDDGC-----KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
L+ A C + G VFD + + W MI Y +++PEEAL+L+
Sbjct: 56 LL---AFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYH 112
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ ++ T + A + + + Q +H + I F ++ NS++ +Y++ G+++ A
Sbjct: 113 SVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSA 172
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
RL+FD +++RD +EAL LF MQ + K + V + + AC L
Sbjct: 173 RLLFDQVDQRD-----------------TEALNLFHRMQTAGIKLDNVALVSTLQACADL 215
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
G G+ H YI ++ID L ++DMYAKCGDL+ A +F + E+ VS W
Sbjct: 216 GVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM--EEKGVSVWTA 273
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I+GY +HG GR+ALE+F +M GV+P+ +TFT IL+ACSHAGL+ E + F M ++
Sbjct: 274 MISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIH 333
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA----- 499
KP ++HY CMVD+LGRAG L EA ++I+ MP+ PN ++WGALL AC IHG +
Sbjct: 334 GFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQI 393
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
L Q++P H G ++ +++I+AA+ +W + ++R MK +G+ K SVI
Sbjct: 394 GKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHE 453
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F D +P KE+ +E + ++ GY P L L D+ED+++E +++HSEKLAV
Sbjct: 454 FLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLAVT 513
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG+++ P +++ KNLRVC DCH+ + IS +Y R+I++RD RFH F+ G C+C DY
Sbjct: 514 FGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCGDY 573
Query: 680 W 680
W
Sbjct: 574 W 574
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 201/393 (51%), Gaps = 42/393 (10%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-----ARSLFNSI 68
LL+ C+ + LRQIH + +GLI + A ++ + PN+ AR++F+ I
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGLILD--EIPASKLLAFC--ASPNSGSLAYARTVFDRI 78
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ +F+WNTMIR Y+N+ E L LY M + N+YTFPF+LKAC+S S + E
Sbjct: 79 F--RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEE 136
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
+ +H II+ GF S+ Y +L+++Y+K G +FD++ RD
Sbjct: 137 TQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRD------------- 183
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
EAL LF + Q G+ D+V +VS A LG + + + +H Y + D +
Sbjct: 184 ----TEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPIL 239
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC 308
++ MYA+CG++E+A VF ME++ + W +M++GY +G+ EAL F +MQ +
Sbjct: 240 GCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGV 299
Query: 309 KPNPVTALILVSACTYLGSRQLGR-------KFHGYIINSNMKIDATLRNAVMDMYAKCG 361
+PN +T +++AC++ G + + HG+ K ++D+ + G
Sbjct: 300 EPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGF------KPSIEHYGCMVDLLGRAG 353
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHG 394
L AE + ++ P + N + W L+ +HG
Sbjct: 354 LLKEAEELIENM-PVKPNAAIWGALLNACHIHG 385
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 242/780 (31%), Positives = 378/780 (48%), Gaps = 119/780 (15%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+LK C L L ++H+ L G +HL +I Y + A +F+
Sbjct: 137 VLKICLALMELWLGMEVHACLLKRGF-QVDVHLSCALINLYEKCLGIDRANQVFDETPLQ 195
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+ FLWNT++ A + + LEL M+ + + T +L+AC + EGK
Sbjct: 196 ED--FLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQ 253
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY----- 186
+HG +IR G +S++ + ++V MY++ + + VFD +L SW +I++Y
Sbjct: 254 IHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGC 313
Query: 187 ------------EQAEKP------------------EEALILFQKTQQEGLLSDSVTIVS 216
+ KP E L + Q G DS +I S
Sbjct: 314 LNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITS 373
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA----------- 265
AV +LG + +HGY + + D+ + S+V MY + +EKA
Sbjct: 374 ALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKN 433
Query: 266 ---------------------RLVFDMME---KRDLISWNSMLTGY-------------- 287
+L+ M E K DL++WNS+++GY
Sbjct: 434 ICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVIN 493
Query: 288 ---------------------IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
QN ++AL F +MQ + KPN T L+ AC
Sbjct: 494 RIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPS 553
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
+ G + H + + D + A++DMY+K G L A +F +I E+ + WN +
Sbjct: 554 LLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNI--KEKTLPCWNCM 611
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLS 445
+ GY ++GHG + F M + G++PD ITFT++LS C ++GL+ +G K F M T S
Sbjct: 612 MMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYS 671
Query: 446 VKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAA 500
+ P ++HY+CMVD+LG+AG L EA D I MP + S+WGA+L ACR+H EIAA
Sbjct: 672 INPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAA 731
Query: 501 NYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGF 560
LF+LEP ++ +VLM NIY+ +W +V +L+E M G+K P +S I+ + I F
Sbjct: 732 RNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVF 791
Query: 561 HTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAF 620
T + +P E+Y + + EIK GY+PD +C +++D ++E +L H+EKLA+ +
Sbjct: 792 STEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTY 851
Query: 621 GIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
G+M + ++V KN R+C DCH+A ++IS R+I +RD RFHHF G CSCND W
Sbjct: 852 GLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 247/510 (48%), Gaps = 43/510 (8%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L S+R++H+ + + + ++ Y +G+ +A +F + ++Y LWN+
Sbjct: 44 LNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVF-FVGFARNY-LLWNSF 101
Query: 82 IRAYAN-NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTG 140
+ +A+ G E LE++ + G+ +S VLK C + + G VH +++ G
Sbjct: 102 LEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRG 161
Query: 141 FLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQ 200
F D ++ AL+++Y KC D +VFDE +++ W ++ A ++E+ E+AL L +
Sbjct: 162 FQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSR 221
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
+ Q + TIV + A G+L + + + +HGY I + + I NSIV+MY+R
Sbjct: 222 RMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNN 281
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
+E AR VFD E +L SWNS+++ Y NG + A LF EM++S KP+ +T L+S
Sbjct: 282 RLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLS 341
Query: 321 -----------------------------------ACTYLGSRQLGRKFHGYIINSNMKI 345
A LG LG++ HGYI+ S ++
Sbjct: 342 GHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEY 401
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
D + +++DMY K L+ AE +F+ H +N+ +WN LI+GY G A + Q
Sbjct: 402 DVYVCTSLVDMYIKNDCLEKAEVVFH--HTKNKNICAWNSLISGYTYKGLFDNAEKLLIQ 459
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGC 465
M EEG+K D +T+ S++S S +G +E + L + P V + M+ +
Sbjct: 460 MKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNEN 519
Query: 466 LYEAFDMIKQMP---LPPNDSVWGALLLAC 492
+A QM + PN + LL AC
Sbjct: 520 YTDALQFFSQMQEENVKPNSTTISTLLRAC 549
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/521 (37%), Positives = 309/521 (59%), Gaps = 9/521 (1%)
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+FD MS D+V + + Y ++ P E LF + ++ LL D+ T S+ A
Sbjct: 87 LFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKA 146
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ + + +H ++ +++ + +++ MY C +V+ AR VFD + + ++ +N+M+TG
Sbjct: 147 LEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITG 206
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y + + +EAL LF EMQ + KPN +T L ++S+C LGS LG+ H Y
Sbjct: 207 YARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKY 266
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ A++DM+AKCG LD A ++F ++ ++ +W+ +I Y HG ++ F +M
Sbjct: 267 VKVNTALIDMFAKCGSLDDAVSIFENMR--YKDTQAWSAMIVAYANHGQAENSMLMFERM 324
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGC 465
E V+PD ITF +L+ACSH GL++EGR+ F+ M + + P +KHY MVD+LGRAG
Sbjct: 325 RSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGH 384
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNI 520
L +A++ I ++P+ P +W LL AC H E + + +L+ H G +V++SN+
Sbjct: 385 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNL 444
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
YA + KW V LR+ MK++ K S IE + F + D V ++++ ++ M
Sbjct: 445 YARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 504
Query: 581 AVEIKMAGYMPDLSCALH-DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
E+K+AGY+PD S +H D+ D+++E L YHSEKLA+AFG++N P ++V KNLRV
Sbjct: 505 VKELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRV 564
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCHSA + IS I+ RK+++RD RFHHFE G CSC D+W
Sbjct: 565 CRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 226/439 (51%), Gaps = 13/439 (2%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKII---IKYTTYGEPNTARSLFNSIHND 71
L+ CN L QI + S + + K+I + T + AR LF+++
Sbjct: 37 LISKCNSERELMQIQAYAIKSH--QEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEP 94
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
F N++ R Y+ + + +E L+ + + ++YTFP +LKACA + EG+
Sbjct: 95 DIVIF--NSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQ 152
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++ G + YV L++MY +C D VFD + +V + MIT Y + +
Sbjct: 153 LHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNR 212
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P EAL LF++ Q + L + +T++SV S+ LG + + +H YA + F + + + +
Sbjct: 213 PNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTA 272
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ M+A+CG+++ A +F+ M +D +W++M+ Y +GQA ++L+F+ M++ + +P+
Sbjct: 273 LIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPD 332
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENM 369
+T L L++AC++ G + GR++ ++++ I ++++ +++D+ + G L+ A
Sbjct: 333 EITFLGLLNACSHTGLVEEGREYFSWMVHE-FGIVPSIKHYGSMVDLLGRAGHLEDAYE- 390
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE--EGVKPDHITFTSILSACSH 427
F D P W +L+A H + A + ++LE + D++ +++ +
Sbjct: 391 FIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKK 450
Query: 428 AGLIDEGRKCFADMTKLSV 446
+D RK D + V
Sbjct: 451 WEAVDSLRKVMKDRKAVKV 469
>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
Length = 653
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/593 (36%), Positives = 334/593 (56%), Gaps = 28/593 (4%)
Query: 112 TFPFVLKACASN-------SLILEGKVVHGDIIRTGFLS--DSYVQA-ALVDMYAKCGQT 161
F +LKA +S+ S + G +H + GFL DS + A A++ YA C +
Sbjct: 65 AFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREP 124
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG--LLSDSVTIVSVAS 219
D KVFD M R+ V+W +I Y QA + EEA++LF+ ++EG + D T ++ S
Sbjct: 125 DLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLS 184
Query: 220 AVGQLGDVLK----AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
+G+ G + A+H + I D + S+V++YA +E A++ FD +
Sbjct: 185 GIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSS 244
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
D I W+SM++ Y+ + ALL+F M D KP + S C +G ++G++ H
Sbjct: 245 DPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVH 304
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF--NDIHPSERNVSSWNVLIAGYGMH 393
+ + SN + DA + NA++ MY+ CG ++ A+ +F ND NV S+N +I+ G H
Sbjct: 305 AHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDC----VNVISYNSMISALGQH 360
Query: 394 GHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKH 452
G+ ++ALE F QM G+ PD +T +++S+ +HAGL+ EG + F M + +KP +H
Sbjct: 361 GYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQH 420
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLE 507
YAC+VDML R+G + +A I +MP +W +L AC H G+ A LF++E
Sbjct: 421 YACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFEME 480
Query: 508 PEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVN 567
P ++L+ NIYA +W E K+R M +G+ K AFS IE G+ F DR +
Sbjct: 481 PYEATNYILLGNIYARLGRWTEAEKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSH 540
Query: 568 PYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTP 627
P +E+Y+ ++ + IK+AGY+PD+S A H+++ + +E L YH EKLA AFG +
Sbjct: 541 PISREIYRNLDRLISTIKVAGYVPDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPS 600
Query: 628 EAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLRVC DCH A+++ S + R+II+RD RFHHF G CSC DYW
Sbjct: 601 GGTLRIMKNLRVCGDCHCAYKYFSLVTGREIILRDNQRFHHFNSGFCSCGDYW 653
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 192/392 (48%), Gaps = 15/392 (3%)
Query: 27 QIHSSLTTSGLI--NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
Q+H+ G + + + L ++ Y + EP+ AR +F+ + + + WN +I+
Sbjct: 91 QLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGM--PRRNAVTWNALIKG 148
Query: 85 YANNGHCVETLELYSTMRRSG--ISSNSYTFPFVL----KACASNSLILEGKVVHGDIIR 138
YA G E + L+ M+R G ++ + YTFP +L + S + G +H +I+
Sbjct: 149 YAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVIK 208
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G D +V A+LV +YA +D FD++ D + W+ MI+AY E+ E AL++
Sbjct: 209 AGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLI 268
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F + + +V S G++G + + VH +++ + +D + N+++ MY+
Sbjct: 269 FFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSD 328
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CG + A+ VF + ++IS+NSM++ Q+G EAL F +M+ + P+ VT L L
Sbjct: 329 CGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNL 388
Query: 319 VSACTYLGSRQLG-RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+S+ + G G + F+ + +K V+DM A+ G++ A N++ P E
Sbjct: 389 ISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEM-PFE 447
Query: 378 RNVSSWNVLIAGYGMHGH---GRKALEFFSQM 406
W +++ H G++ E +M
Sbjct: 448 AEAPLWRIVLGACSKHRDIETGKRIAEMLFEM 479
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/545 (37%), Positives = 319/545 (58%), Gaps = 20/545 (3%)
Query: 144 DSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQ 203
D+ ++ Y + + F++M ++D SW MIT + Q ++ ++A LF
Sbjct: 37 DAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMP 96
Query: 204 QEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
+ + VT ++ S + GD+ A + A + + +++ Y + G +
Sbjct: 97 TKNV----VTWNAMISGYVECGDLDSALKLFE----KAPFKSVVAWTAMITGYMKLGRIG 148
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
A +F+ M +++L++WN+M+ GYI+N +A + + LF M +PN T + C+
Sbjct: 149 LAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCS 208
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + QLGR+ H + S + D T +++ MY KCG L+ +F + R+V +W
Sbjct: 209 ELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLF--VQVPRRDVVTW 266
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK 443
N +I+GY HG G+KAL F +M+E+G+KPD ITF ++L AC+HAG D G K F M K
Sbjct: 267 NAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAK 326
Query: 444 ---LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH----- 495
L KP+ HY CMVD+LGRAG L EA D+I++MP P+ +V+G LL ACRIH
Sbjct: 327 DYGLVAKPD--HYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEM 384
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
E A+ L L+P +V ++N+YAA+ +W V ++R+ MK+ + K +S IE
Sbjct: 385 AEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKS 444
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
F + D+ +P ++ K++ + ++K+AGY+PDL ALHDV +E +E +L +HSEK
Sbjct: 445 MAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEK 504
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LA+A+G++ L P ++V KNLRVC DCH A ++IS I RR+IIVRD RFHHF+ G CS
Sbjct: 505 LAIAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCS 564
Query: 676 CNDYW 680
C DYW
Sbjct: 565 CADYW 569
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 160/332 (48%), Gaps = 13/332 (3%)
Query: 78 WNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WNTMI +A N + +L+ M ++ ++ N+ +V ++L L K +
Sbjct: 72 WNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSV 131
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ A++ Y K G+ ++F++M ++LV+W MI Y + + E+ +
Sbjct: 132 V---------AWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGV 182
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF+ G+ +S T+ S +L + + VH + +D S+++MY
Sbjct: 183 KLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMY 242
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+CG +E +F + +RD+++WN+M++GY Q+G+ +AL LFDEM KP+ +T +
Sbjct: 243 CKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFV 302
Query: 317 ILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++ AC + G LG K FH + + ++D+ + G L A ++ + P
Sbjct: 303 AVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKM-P 361
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQML 407
+ + + + L+ +H + A EF SQ L
Sbjct: 362 FKPHAAVFGTLLGACRIHKNTEMA-EFASQKL 392
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 2/178 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y G A LF + + WN MI Y N + ++L+ TM GI
Sbjct: 137 MITGYMKLGRIGLAERLFEKMPEKNLVT--WNAMIAGYIENHRAEDGVKLFRTMVGFGIQ 194
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
NS T L C+ S + G+ VH + ++ D+ +L+ MY KCG +DG K+
Sbjct: 195 PNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKL 254
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
F ++ RD+V+W MI+ Y Q + ++AL LF + ++G+ D +T V+V A G
Sbjct: 255 FVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAG 312
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 243 LEDLCIQNSIVA-MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFD 301
L+ NS++A M + G +++A+ +F + + D +S+N+ML+ Y++N A F+
Sbjct: 3 LKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFE 62
Query: 302 EMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCG 361
+M D P+ T + + ++Q+ + ++I + NA++ Y +CG
Sbjct: 63 DMPIKDT-PSWNTMIT-----GFAQNQQMDKARDLFLIMPTKNV--VTWNAMISGYVECG 114
Query: 362 DLDTAENMFNDI-----------------------------HPSERNVSSWNVLIAGYGM 392
DLD+A +F E+N+ +WN +IAGY
Sbjct: 115 DLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIE 174
Query: 393 HGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKH 452
+ ++ F M+ G++P+ T +S L CS + GR+ + K + +
Sbjct: 175 NHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTA 234
Query: 453 YACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGE 497
++ M + G L + + + Q +P D V W A++ HGE
Sbjct: 235 GTSLISMYCKCGVLEDGWKLFVQ--VPRRDVVTWNAMISGYAQHGE 278
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/611 (35%), Positives = 335/611 (54%), Gaps = 52/611 (8%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L CAS E +H +R G D V L YA G+ D +
Sbjct: 36 LLAGCASARRASE---LHAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPDPT 92
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQ-QEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
V +T I A+ AL L + GLL + T+ + A G L +A+H
Sbjct: 93 AVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPACGGLA---VGRALH 149
Query: 235 GYAICNAFLEDLCIQNSIVAMY--------------------------------ARCGNV 262
GYA+ A + + +++ MY A+ G +
Sbjct: 150 GYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLL 209
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
+ AR +FD + +DLI WN+M+ GY Q+G+ SEAL LF M S +P+ V+ ++ +SA
Sbjct: 210 DDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAV 269
Query: 323 TYLGSRQLGRKFHGYIINSN---MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
LG+ + GR H ++ NS+ ++++A + A++DMY KCG L+ A +F D+ +R+
Sbjct: 270 AQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRD 329
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
+ +WN ++ GY MHGH R+AL F Q+ +G+ P ITF +L+ACSH+GL+DEGR+ F
Sbjct: 330 IVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFR 389
Query: 440 DMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIH-- 495
M + ++P+V+HY CMVD+LGRAG + EAF++++ M D+V W +LL ACR+H
Sbjct: 390 SMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKN 449
Query: 496 ---GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
G+ A++L ++G +VL+SN+YAA+ WREVG++R M+ G++K S +E
Sbjct: 450 MELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVE 509
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP---DLSCALHDVEDEDREHML 609
G+ + F DR +P E+Y K+E + + G++P + L D + +E L
Sbjct: 510 VGRRVVEFVAGDRSHPRAAEIYAKLEEVNGMARARGHVPRTELVLHDLDDDDTAAKEQAL 569
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+AFG+++ P +++ KNLR C DCH+ + +S + RKI+ RD NRFHHF
Sbjct: 570 AVHSEKLALAFGLISTPPGTAIKIVKNLRACADCHAVLKLVSEVTGRKIVFRDRNRFHHF 629
Query: 670 EGGTCSCNDYW 680
G+C+C DYW
Sbjct: 630 VDGSCTCGDYW 640
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G + ARSLF+ + + WN M+ Y +G E L L+ M RSG+ +
Sbjct: 203 YAKMGLLDDARSLFDGLPSKDL--ICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEV 260
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLS---DSYVQAALVDMYAKCGQTDDGCKVF 168
+ L A A G+ +H + + ++ V AL+DMY KCG +D VF
Sbjct: 261 SVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVF 320
Query: 169 DEMSV--RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
++ RD+V+W M+ Y EAL F + + +GL +T + V +A G
Sbjct: 321 GDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGL 380
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSI------VAMYARCGNVEKA-RLVFDMME-KRDLI 278
V + G + + E+ I+ + V + R G VE+A LV M K D +
Sbjct: 381 VDE-----GRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAV 435
Query: 279 SWNSMLT 285
W S+L
Sbjct: 436 MWASLLA 442
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 24 SLRQIHSSLTTSGLINQALH--LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
S R +HS +T S L+ +G +I Y G A ++F + WN M
Sbjct: 277 SGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAM 336
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT-- 139
+ YA +GH E L + +R G+ TF VL AC+ + L+ EG+ ++ R+
Sbjct: 337 VNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGR----ELFRSMA 392
Query: 140 ---GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR--DLVSWTVMITA 185
G +VD+ + G+ ++ ++ M+ D V W ++ A
Sbjct: 393 EEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAA 443
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/497 (41%), Positives = 300/497 (60%), Gaps = 10/497 (2%)
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P A+ ++ L S T +VA A L + A+H ++I F D + +
Sbjct: 86 PVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTGAAIHAHSILLGFGSDRFVLTA 145
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+V +Y++CG + AR +FD + R +++WN+M++GY QNG A + ++ EMQ + P+
Sbjct: 146 LVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQNGLAERGIGVYKEMQAAKAVPD 205
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T + +SAC G+ LGR+ +++ M I L +A+++MYA+CG +D A F+
Sbjct: 206 SMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYARCGVVDKARRWFD 265
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ ERNV +W +IAGYGMHGHGR+A++ F M EG P+H+TF ++LSAC+HAGL+
Sbjct: 266 AL--QERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVAVLSACAHAGLV 323
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ-MPLPPNDSVWGALL 489
EGR FA M ++ + P V+HY MVDM GRAG L EA I MP P VW A+L
Sbjct: 324 MEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQFISDYMPGEPGPEVWTAVL 383
Query: 490 LACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKK 544
AC++H G A L LEPE+ Y VL+SNIYA S K V K+R M + LKK
Sbjct: 384 GACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYALSGKMHHVEKVRNTMIKRRLKK 443
Query: 545 PAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDED 604
FS+IE G F ++ +P E+Y +E + I AGYMP+ LH++E+E+
Sbjct: 444 QIGFSLIELGGTSHLFRMGEKSHPQTTEIYHYLEELIHRITAAGYMPETESVLHELEEEE 503
Query: 605 REHMLNYHSEKLAVAFGI-MNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
RE L YHSEKLAVA+G+ M++ ++V KNLR+C DCH A +F+S + R+I+VRD
Sbjct: 504 REGALRYHSEKLAVAYGLMMSVGSTTPIRVIKNLRICGDCHLAIKFMSAVENREIVVRDK 563
Query: 664 NRFHHFEGGTCSCNDYW 680
+RFHHF+ G CSC +YW
Sbjct: 564 HRFHHFKDGKCSCLEYW 580
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 210/425 (49%), Gaps = 20/425 (4%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF 65
PS E + LL + L+Q H+ L +G ++L L K+ G A L
Sbjct: 6 PSPE--HSSLLLAGPRGGPLKQAHARLVVTGH-GRSLPLITKLATLAVAAGAAPYAHLLA 62
Query: 66 NSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL 125
S + SFL++++ R A++G V + Y + + + +S+TF V KACA S
Sbjct: 63 TS--HPAPDSFLFSSLTRTAAHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSA 120
Query: 126 ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
+ G +H I GF SD +V ALV +Y+KCGQ K+FD + R +V+W MI+
Sbjct: 121 LRTGAAIHAHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISG 180
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
YEQ E + ++++ Q + DS+T V+ SA Q G + + V +
Sbjct: 181 YEQNGLAERGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDIS 240
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ + +++V MYARCG V+KAR FD +++R++++W SM+ GY +G EA+ LF M+
Sbjct: 241 VFLGSALVNMYARCGVVDKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRC 300
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGR-------KFHGYIINSNMKIDATLRNAVMDMYA 358
PN VT + ++SAC + G GR + +G + +++DM+
Sbjct: 301 EGPPPNHVTFVAVLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHYC------SMVDMFG 354
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+ G LD A +D P E W ++ MH + +E +++ ++P++ ++
Sbjct: 355 RAGLLDEAMQFISDYMPGEPGPEVWTAVLGACKMHKNFNLGVEVAERLI--ALEPENPSY 412
Query: 419 TSILS 423
+LS
Sbjct: 413 HVLLS 417
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 239/711 (33%), Positives = 374/711 (52%), Gaps = 80/711 (11%)
Query: 27 QIHSSLTTSGLINQ---ALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIR 83
Q+H+ LTTSG I A HL + + SLF+ + + + FL +T +R
Sbjct: 17 QLHAILTTSGRIAHRPSAEHLLNSLTNCLSAPRHLRYVLSLFDRLPHPTT--FLHDTALR 74
Query: 84 A--YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
A A+ G L L R S ++TF FV + CA+ + +++H +RT
Sbjct: 75 ACLQASAGADHPVLILRRMRRGGVRMS-AFTFHFVFRCCAAGAGAGLCRMLHAACLRTML 133
Query: 142 LSDSYVQA-ALVDMYAKCGQTDDGCKVFDEMSVRD------------------------- 175
S + + A L+ MYA G TDD + FDE+ V+D
Sbjct: 134 PSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDEARRLLV 193
Query: 176 ------LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA--------- 220
+VSWT +I Y +A +P +A+ F +G+ D V ++ SA
Sbjct: 194 QAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEF 253
Query: 221 -------VG----QLGDVLKAQAVHGYAICNAFLEDLCI------------QNSIVAMYA 257
VG Q+ D L + YA C + + N I+ Y
Sbjct: 254 GRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYC 313
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+ G+V+ AR +FD M RD+I++NSM+TGYI +G+ +AL LF +++ + + T +
Sbjct: 314 KLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVS 373
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L++AC LG+ GR H I ++ D L A++DMY KCG +D A +F+ + E
Sbjct: 374 LLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRM--GE 431
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
R+V +W+ +IAG +G G ALE F QM +G +P +T+ ++L+ACSH+ L++EGR+
Sbjct: 432 RDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQH 491
Query: 438 FADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
F +M L + P+++HY CM+D+L R+G L EA +++ MP+ PN +W ++L ACR+H
Sbjct: 492 FNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHK 551
Query: 497 EI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
I AA +L +L PE +V + NIY S +W E ++R M+ +G+KK A +S I
Sbjct: 552 NIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSI 611
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
+ F D+ +P+ E+ +E +A +K AGY P S DV++E++E L
Sbjct: 612 TVAGQVHKFVVNDQSHPWTLEIITMMEEIARRLKSAGYSPATSRIAVDVDEEEKEQALLA 671
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
HSEK+A+AFG+++L P + + KNLRVC DCHSA + IS ++ R+IIVRD
Sbjct: 672 HSEKIAIAFGLISLPPNLPIHIMKNLRVCEDCHSAIKLISQLWNREIIVRD 722
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/632 (34%), Positives = 343/632 (54%), Gaps = 31/632 (4%)
Query: 58 PNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVL 117
P+ A +L + SF +++R Y +G + + L+ M N ++ +L
Sbjct: 97 PDAAAALASIPFPPSVVSF--TSLLRGYVRHGLLADAIRLFQQMP----ERNHVSYTVLL 150
Query: 118 KACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV 177
+ E + + ++ D A++ Y + G+ + +FDEM R++V
Sbjct: 151 GGLLDAGRVNEARRLFDEMPD----RDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV 206
Query: 178 SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA--VGQLGDVLKAQAVHG 235
SWT MI+ Y Q + A LF+ + +S + +V A V ++ A H
Sbjct: 207 SWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHP 266
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
A CNA + + + G V+ A+ VF+ M +RD +W++M+ Y QN E
Sbjct: 267 VAACNAMM----------VGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLME 316
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL F EM +PN + + +++ C L GR+ H ++ + +D +A++
Sbjct: 317 ALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALIT 376
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
MY KCG+LD A+ +F+ P +++ WN +I GY HG G +AL F M G+ PD
Sbjct: 377 MYIKCGNLDKAKRVFHTFEP--KDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDG 434
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
IT+ L+ACS+ G + EGR+ F MT S++P +HY+CMVD+LGR+G + EAFD+IK
Sbjct: 435 ITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIK 494
Query: 475 QMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWRE 529
MP+ P+ +WGAL+ ACR+H E AA L +LEP + G +VL+S+IY + +W +
Sbjct: 495 NMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWED 554
Query: 530 VGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRV-NPYWKEVYKKVESMAVEIKMAG 588
K+R+ + ++ L K S IEY K + F + D + +P + + +E + + +G
Sbjct: 555 ASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESG 614
Query: 589 YMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFR 648
Y D S LHD+++E + H L YHSE+ AVA+G++ + ++V KNLRVC DCHSA +
Sbjct: 615 YSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIK 674
Query: 649 FISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I+ I R+II+RDANRFHHF+ G CSC DYW
Sbjct: 675 LIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 18/262 (6%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
N+ +A AR GN+E AR F+ M R S+N++L GY +N AL LF M + D
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL- 79
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
+ L+S + RQ + + +++ Y + G L A +
Sbjct: 80 ---ASYNALISGLSL--RRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRL 134
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F + ERN S+ VL+ G G +A F +M + D + +T++LS AG
Sbjct: 135 FQQM--PERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR----DVVAWTAMLSGYCQAG 188
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
I E R F +M K + V + M+ + G + A + + MP N+ W A+L
Sbjct: 189 RITEARALFDEMPKRN----VVSWTAMISGYAQNGEVNLARKLFEVMP-ERNEVSWTAML 243
Query: 490 LACRIHGEIA-ANYLFQLEPEH 510
+ G + A LF PEH
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEH 265
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L C LA L R++H+++ + A +I Y G + A+ +F++ +
Sbjct: 339 ILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSA-LITMYIKCGNLDKAKRVFHTF--E 395
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+WN+MI YA +G + L ++ MR +G+S + T+ L AC+ + EG+
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGRE 455
Query: 132 VHGDI-----IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA 185
+ + IR G ++ Y + +VD+ + G ++ + M V D V W ++ A
Sbjct: 456 IFNSMTVNSSIRPG--AEHY--SCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Query: 186 YEQAEKPEEALILFQK--TQQEGLLSDSVTIVSVASAVGQLGDVLK 229
E A +K + G V + + ++VG+ D K
Sbjct: 512 CRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASK 557
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/521 (36%), Positives = 308/521 (59%), Gaps = 9/521 (1%)
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+F+ MS D+V + M Y + P E LF + ++G+L D+ T S+ A
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTG 286
+ + + +H ++ +++ + +++ MY C +V+ AR VFD + + ++ +N+M+TG
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204
Query: 287 YIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKID 346
Y + + +EAL LF EMQ KPN +T L ++S+C LGS LG+ H Y +
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ A++DM+AKCG LD A ++F + ++ +W+ +I Y HG K++ F +M
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMR--YKDTQAWSAMIVAYANHGKAEKSMLMFERM 322
Query: 407 LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGC 465
E V+PD ITF +L+ACSH G ++EGRK F+ M +K + P +KHY MVD+L RAG
Sbjct: 323 RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGN 382
Query: 466 LYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNI 520
L +A++ I ++P+ P +W LL AC H E + +F+L+ H G +V++SN+
Sbjct: 383 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNL 442
Query: 521 YAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESM 580
YA + KW V LR+ MK++ K S IE + F + D V ++++ ++ M
Sbjct: 443 YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 502
Query: 581 AVEIKMAGYMPDLSCALH-DVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
E+K++GY+PD S +H ++ D+++E L YHSEKLA+ FG++N P ++V KNLRV
Sbjct: 503 VKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRV 562
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+A + IS I+ RK+++RD RFHHFE G CSC D+W
Sbjct: 563 CRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 231/439 (52%), Gaps = 13/439 (2%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKII---IKYTTYGEPNTARSLFNSIHND 71
L+ CN L L QI + S + + + AK+I + T + AR LF ++
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHI--EDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
F N+M R Y+ + +E L+ + GI ++YTFP +LKACA + EG+
Sbjct: 93 DIVIF--NSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++ G + YV L++MY +C D VFD + +V + MIT Y + +
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P EAL LF++ Q + L + +T++SV S+ LG + + +H YA ++F + + + +
Sbjct: 211 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 270
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ M+A+CG+++ A +F+ M +D +W++M+ Y +G+A +++L+F+ M++ + +P+
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 330
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENM 369
+T L L++AC++ G + GRK+ ++ S I ++++ +++D+ ++ G+L+ A
Sbjct: 331 EITFLGLLNACSHTGRVEEGRKYFSQMV-SKFGIVPSIKHYGSMVDLLSRAGNLEDAYE- 388
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM--LEEGVKPDHITFTSILSACSH 427
F D P W +L+A H + A + ++ L++ D++ +++ +
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 448
Query: 428 AGLIDEGRKCFADMTKLSV 446
+D RK D + V
Sbjct: 449 WEYVDSLRKVMKDRKAVKV 467
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/679 (33%), Positives = 365/679 (53%), Gaps = 49/679 (7%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALH--LGAKIIIKYTTYGEPNTARSLFNSI 68
Y L++ C + S+ I + S + + H LG K+I Y G AR +F+ +
Sbjct: 80 LYSSLIQQCIGIKSITDI--TKIQSHALKRGFHHSLGNKLIDAYLKCGSVVYARKVFDEV 137
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
+ + WN+MI +Y NG E +++Y M GI + +TF V KA + L+ E
Sbjct: 138 PH--RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE 195
Query: 129 GKVVHGDIIRTGF-LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ HG + G +S+ +V +ALVDMYAK G+ D V D++ +D+V +T +I Y
Sbjct: 196 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYS 255
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ E+L +F+ ++G+ ++ T+ SV G L D+ + +HG I A LE
Sbjct: 256 HHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGL-IVKAGLESA- 313
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
++W S++ G +QNG+ ALL F +M S
Sbjct: 314 ------------------------------VTWTSVIVGLVQNGREEIALLKFRQMLRSS 343
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
PN T ++ AC+ L + G++ H ++ + ID + A++D Y KCG + A
Sbjct: 344 ITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIAR 403
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
++FN + E +V S N +I Y +G G +AL+ FS M + G++P+++T+ +LSAC++
Sbjct: 404 SVFNGL--LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNN 461
Query: 428 AGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
AGL++EG F+ +++ HYACMVD+LGRAG L EA +I Q+ + + +W
Sbjct: 462 AGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVIWR 520
Query: 487 ALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKG 541
LL ACRIHG++ N + L PE G VL+SN+YA++ W +V +++ M+
Sbjct: 521 TLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMR 580
Query: 542 LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVE 601
LKK A S ++ ++I F D +P ++++ +K+E + ++K GY+PD L D++
Sbjct: 581 LKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLD 640
Query: 602 DEDREHMLNYHSEKLAVAFGIMNLT-PEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
+E + L YHSEKLAVAF + +++ KNLRVC DCH+ +F+S I R II
Sbjct: 641 EEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIA 700
Query: 661 RDANRFHHFEGGTCSCNDY 679
RD RFHHF G CSC DY
Sbjct: 701 RDVKRFHHFRNGLCSCGDY 719
>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
Length = 613
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/529 (37%), Positives = 317/529 (59%), Gaps = 16/529 (3%)
Query: 159 GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVA 218
G D ++F M VRD+ SW M++ ++ EEA ++F + +SV+ ++
Sbjct: 94 GDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMP----VRNSVSWNAMV 149
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLI 278
S GD+ A+ A ED + ++V+ Y GNV KA F+ M R+L+
Sbjct: 150 SGFACSGDMSTAEEWFRNAPEK---EDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLV 206
Query: 279 SWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGY 337
SWN+++ GY++N A +AL LF M + ++ +PN T ++ C+ L + G++ H +
Sbjct: 207 SWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQW 266
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
+ + + T+ +++ MY KCGDL +A +F ++H R+V +WN +I+GY HG G+
Sbjct: 267 CMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMH--TRDVVAWNAMISGYAQHGDGK 324
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACM 456
+A+ F +M +EGV+P+ ITF +L+AC H GL D G +CF M +L ++P V HY+CM
Sbjct: 325 EAINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCM 384
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHT 511
VD+L RAG L A D I+ MP P+ S +G LL ACR++ E+AA L + +P+
Sbjct: 385 VDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSA 444
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G +V ++NIYA +N+W +V ++R MK+ + K +S IE + F + DR++P
Sbjct: 445 GAYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLY 504
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVV 631
+++K+ +A +K GY+PDL LHDV++ + ML HSEKLA+AFG+++ +
Sbjct: 505 LIHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTL 564
Query: 632 QVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++ KNLRVC DCH+A + IS I R+II+RD RFHHF GG CSC+DYW
Sbjct: 565 RIFKNLRVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 184/382 (48%), Gaps = 31/382 (8%)
Query: 36 GLINQALHLGAKI----IIKYTTY-------GEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
G + A HL +I ++ Y T G+ + AR LF S+ S WNTM+
Sbjct: 63 GRLADARHLFDRIPTPDVVSYNTLLLCHFASGDADGARRLFASMPVRDVAS--WNTMVSG 120
Query: 85 YANNGHCVETLELYSTMR-RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF-L 142
+ +G E ++ M R+ +S N+ F AC+ + E + R
Sbjct: 121 LSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGF---ACSGDMSTAE------EWFRNAPEK 171
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
D+ + A+V Y G K F+ M VR+LVSW ++ Y + ++AL LF+
Sbjct: 172 EDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTM 231
Query: 203 QQEG-LLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+E + ++ T+ SV L + + +H + + +L + S+V+MY +CG+
Sbjct: 232 VREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGD 291
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+ A ++F M RD+++WN+M++GY Q+G EA+ LF+ M++ +PN +T +++++A
Sbjct: 292 LSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTA 351
Query: 322 CTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNV 380
C + G G + F G ++ + ++D+ + G L+ A + + P E +
Sbjct: 352 CIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSM-PFEPHP 410
Query: 381 SSWNVLIAGYGMHGHGRKALEF 402
S++ L+A ++ K LEF
Sbjct: 411 SAYGTLLAACRVY----KNLEF 428
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/587 (36%), Positives = 327/587 (55%), Gaps = 9/587 (1%)
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
MR SG N +TF +L A A+ ++L G+ +H I + GF ++ +V ALVDMYAKC
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEG-LLSDSVTIVSVAS 219
+VFD+M R+LVSW MI + + A+ +F+ +E ++ + V++ SV S
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 220 AVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLIS 279
A +G + + VHG + + + NS++ MY +C ++ +F + RD+++
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180
Query: 280 WNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
WN ++ G++QN + EA F M+ P+ + ++ + L + G H II
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
+ + +++ MYAKCG L A +F I + NV SW +I+ Y +HG +
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGI--EDHNVISWTAMISAYQLHGCANQV 298
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVD 458
+E F ML EG++P H+TF +LSACSH G ++EG F M K+ + P +HYACMVD
Sbjct: 299 IELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVD 358
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGY 513
+LGRAG L EA I+ MP+ P SVWGALL ACR +G + AA LF++EP + G
Sbjct: 359 LLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGN 418
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
+VL++N+ S + E ++R M G++K S I+ F DR + E+
Sbjct: 419 YVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEI 478
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
YK +E + +K GY+ + + +E+ + E L YHSEKLA+AFG++ L ++ +++
Sbjct: 479 YKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRI 538
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR C CH+ + S I+ R+IIVRD NRFH F G CSC DYW
Sbjct: 539 KKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 218/429 (50%), Gaps = 13/429 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+HS + G + + +G ++ Y + ++A +F+ + S WN+MI +
Sbjct: 30 QQLHSLIHKHGF-DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVS--WNSMIVGF 86
Query: 86 ANNGHCVETLELYS-TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+N + ++ +R + N + VL ACA+ + G+ VHG +++ G +
Sbjct: 87 FHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPL 146
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+YV +L+DMY KC D+G K+F + RD+V+W V++ + Q +K EEA F ++
Sbjct: 147 TYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRR 206
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
EG+L D + +V + L + + A+H I +++++CI S++ MYA+CG++
Sbjct: 207 EGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVD 266
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
A VF+ +E ++ISW +M++ Y +G A++ + LF+ M + +P+ VT + ++SAC++
Sbjct: 267 AYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH 326
Query: 325 LGSRQLG-RKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
G + G F+ +M ++D+ + G LD A+ + P + S W
Sbjct: 327 TGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESM-PMKPTPSVW 385
Query: 384 NVLIAG---YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFAD 440
L+ YG GR+A E +M E P + + + + C+ +G ++E +
Sbjct: 386 GALLGACRKYGNLKMGREAAERLFEM--EPYNPGN--YVLLANMCTRSGRLEEANEVRRL 441
Query: 441 MTKLSVKPE 449
M V+ E
Sbjct: 442 MGVNGVRKE 450
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/595 (36%), Positives = 347/595 (58%), Gaps = 15/595 (2%)
Query: 1 MRRLG--PSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP 58
MRR G PS+ LL + LA ++ +H G ++ ++L ++ Y G
Sbjct: 153 MRRQGIQPSSVTVLS-LLFGVSELAHVQCLHGCAILYGFMSD-INLSNSMLNVYGKCGNI 210
Query: 59 NTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLK 118
+R LF+ + + S WN++I AYA G+ E L L TMR G + TF VL
Sbjct: 211 EYSRKLFDYMDHRDLVS--WNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLS 268
Query: 119 ACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVS 178
AS + G+ +HG I+R GF D++V+ +L+ +Y K G+ D ++F+ S +D+V
Sbjct: 269 VAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVL 328
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI 238
WT MI+ Q ++AL +F++ + G+ + T+ SV +A QLG ++ GY +
Sbjct: 329 WTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYIL 388
Query: 239 CNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALL 298
D+ QNS+V MYA+CG+++++ +VFDMM +RDL+SWN+M+TGY QNG EAL
Sbjct: 389 RQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALF 448
Query: 299 LFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYA 358
LF+EM++ + P+ +T + L+ C G LG+ H ++I + ++ + +++DMY
Sbjct: 449 LFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYC 508
Query: 359 KCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
KCGDLDTA+ FN + PS ++ SW+ +I GYG HG G AL F+S+ LE G+KP+H+ F
Sbjct: 509 KCGDLDTAQRCFNQM-PSH-DLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIF 566
Query: 419 TSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
S+LS+CSH GL+++G + MTK + P+++H+AC+VD+L RAG + EA+++ K+
Sbjct: 567 LSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKF 626
Query: 478 LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
P V G +L ACR + G+ AN + L P G FV +++ YA+ NKW EVG+
Sbjct: 627 PDPVLDVLGIILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGE 686
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVE-IKM 586
M++ GLKK +S I+ I F T +P ++E+ ++ + E IKM
Sbjct: 687 AWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTLKILRKEMIKM 741
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 267/525 (50%), Gaps = 21/525 (4%)
Query: 6 PSTEGFYDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
PS + LLK+C+FL +H + SGL A ++ + +I Y +G + AR
Sbjct: 58 PSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDA-YIASSLINFYAKFGFADVAR 116
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F+ + W T+I Y+ G E L+ MRR GI +S T VL
Sbjct: 117 KVFDYMPERNVVP--WTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVT---VLSLLFG 171
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
S + + +HG I GF+SD + +++++Y KCG + K+FD M RDLVSW +
Sbjct: 172 VSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSL 231
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I+AY Q E L+L + + +G + T SV S G++ + +HG + F
Sbjct: 232 ISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGF 291
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
D ++ S++ +Y + G ++ A +F+ +D++ W +M++G +QNG A +AL +F +
Sbjct: 292 YLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQ 351
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M KP+ T +++AC LGS LG GYI+ + +D +N+++ MYAKCG
Sbjct: 352 MLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGH 411
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
LD + +F+ ++ R++ SWN ++ GY +G+ +AL F++M + PD IT S+L
Sbjct: 412 LDQSSIVFDMMN--RRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLL 469
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
C+ G + G+ + + + ++P + +VDM + G L A QM P +D
Sbjct: 470 QGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQM--PSHD 527
Query: 483 SV-WGALLLACRIHGEIAANYLFQ-------LEPEHTGYFVLMSN 519
V W A+++ HG+ A F ++P H + ++S+
Sbjct: 528 LVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSS 572
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 234/430 (54%), Gaps = 13/430 (3%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N I ++ G + L Y++M ++ + S++YTFP +LKAC+ +L G +H I+
Sbjct: 30 NATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILV 89
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
+G D+Y+ ++L++ YAK G D KVFD M R++V WT +I Y + + EA L
Sbjct: 90 SGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSL 149
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F + +++G+ SVT++S+ V +L V Q +HG AI F+ D+ + NS++ +Y +
Sbjct: 150 FDEMRRQGIQPSSVTVLSLLFGVSELAHV---QCLHGCAILYGFMSDINLSNSMLNVYGK 206
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
CGN+E +R +FD M+ RDL+SWNS+++ Y Q G E LLL M+ + P T +
Sbjct: 207 CGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSV 266
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+S G +LGR HG I+ + +DA + +++ +Y K G +D A MF S++
Sbjct: 267 LSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFE--RSSDK 324
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V W +I+G +G KAL F QML+ GVKP T S+++AC+ G + G
Sbjct: 325 DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSIL 384
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWGALLLACRIH 495
+ + + +V +V M + G L ++ FDM+ + L W A++ +
Sbjct: 385 GYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVS----WNAMVTGYAQN 440
Query: 496 GEIA-ANYLF 504
G + A +LF
Sbjct: 441 GYVCEALFLF 450
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Query: 279 SWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
S N+ + + G + L + M + + T L+ AC++L LG H I
Sbjct: 28 SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87
Query: 339 INSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ S + +DA + +++++ YAK G D A +F D P ERNV W +I Y G +
Sbjct: 88 LVSGLSLDAYIASSLINFYAKFGFADVARKVF-DYMP-ERNVVPWTTIIGCYSRTGRVPE 145
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACS 426
A F +M +G++P +T S+L S
Sbjct: 146 AFSLFDEMRRQGIQPSSVTVLSLLFGVS 173
>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
Length = 809
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/689 (32%), Positives = 362/689 (52%), Gaps = 32/689 (4%)
Query: 16 LKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDK 72
L C L L IH + L++ L +G ++ Y G + A+ LF+ +
Sbjct: 129 LNVCGILKRLEDGAGIHRQIQDK-LLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKN 187
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK-V 131
S W ++ +A NG ET L +M GI + +L C+S ++ E +
Sbjct: 188 VIS--WTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWM 245
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM---SVRDLVSWTVMITAYEQ 188
H I+ +G ++ V AL+ M+A+CG+ D ++F+++ S + + W MITAY
Sbjct: 246 AHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAH 305
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
+EAL L Q +G+ + +T +S A L D +A+H + F ++ +
Sbjct: 306 RGCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDREVSV 362
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SD 307
N++V MY RCG++ + +F M ++DL SWNS + + +G++ E + L D+M+
Sbjct: 363 ANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGG 422
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+P+ VT + +SAC L ++ H ++ + + N ++DMY K GD+DTA
Sbjct: 423 LEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTAR 482
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F+ RNV++WN + Y G R L M +G +PD +TF S+LS C H
Sbjct: 483 YIFD--RALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGH 540
Query: 428 AGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL--PPNDSV 484
+GL++E R F M + + P KHY+C++D+L RAG L +A D I ++ + P + +
Sbjct: 541 SGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPM 600
Query: 485 WGALLLACRIHGEIA---------ANYLFQLEP----EHTGYFVLMSNIYAASNKWREVG 531
W ALL ACR G+ + A + ++EP + + V ++NI AAS W E
Sbjct: 601 WMALLGACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEAL 660
Query: 532 KLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMP 591
+R+ M KGL+K S+I + F DR +P +E+Y ++ + + GY+
Sbjct: 661 SIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVV 720
Query: 592 DLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFIS 651
D H+V + D+ +L HSEKLAVAFG+++ P + +++ KNLR C DCH+A + IS
Sbjct: 721 DTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLIS 780
Query: 652 YIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
I R+I+VRD+NRFHHF G+CSC DYW
Sbjct: 781 AIEGREIVVRDSNRFHHFRNGSCSCGDYW 809
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 251/501 (50%), Gaps = 26/501 (5%)
Query: 12 YDQLLKSCNFLASL---RQIHSSLTTSGLI------NQALHLGAKIIIKYTTYGEPNTAR 62
Y +LLK C L L +++H+ + SGL+ + A LG ++ Y G + A+
Sbjct: 17 YARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQ 76
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
F+SI + +S W +++ AY + G + LE + M ++G+ + F L C
Sbjct: 77 RAFDSIAHKNIFS--WTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGI 134
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
+ +G +H I SD + ALV MY KCG+ D ++FD + +++++SWT++
Sbjct: 135 LKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTIL 194
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSV---TIVSVASAVGQLGDVLKAQAVHGYAIC 239
++ + + + E L + EG+ D V T+++V S+ G L + + H Y +
Sbjct: 195 VSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDE--DSWMAHDYIVG 252
Query: 240 NAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRD---LISWNSMLTGYIQNGQASEA 296
+ + + ++++M+ARCG V+KAR +F+ + + WN+M+T Y G + EA
Sbjct: 253 SGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEA 312
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
L L D +Q KPN +T + + AC+ L Q GR H I S + ++ NA++ M
Sbjct: 313 LFLLDSLQLQGVKPNCITFISSLGACSSL---QDGRALHLLIDESGFDREVSVANALVTM 369
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQML-EEGVKPDH 415
Y +CG L + +F+++ +E++++SWN IA + HG + ++ QM E G++P
Sbjct: 370 YGRCGSLLDSAKLFSEM--AEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSS 427
Query: 416 ITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
+T + +SAC ++ +L ++ E +VDM G+AG + A I
Sbjct: 428 VTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTA-RYIFD 486
Query: 476 MPLPPNDSVWGALLLACRIHG 496
L N + W A+ A R G
Sbjct: 487 RALRRNVTTWNAMAGAYRQCG 507
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 201/410 (49%), Gaps = 13/410 (3%)
Query: 97 LYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS-------YVQA 149
+ + + RSG+ ++ +LK C + GK +H I +G L D ++
Sbjct: 1 MRAAISRSGVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGN 60
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
LV MY KCG+TD+ + FD ++ +++ SWT ++ AY A +AL F + + G+
Sbjct: 61 CLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEP 120
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D + ++ + G L + +H DL I N++V+MY +CG ++ A+ +F
Sbjct: 121 DRLVFLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLF 180
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS-R 328
D +E +++ISW +++ + +NG+ E L M KP+ V L L++ C+ G
Sbjct: 181 DCLEMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLD 240
Query: 329 QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP-SERNVSSWNVLI 387
+ H YI+ S + +A + A++ M+A+CG +D A +F + S + + WN +I
Sbjct: 241 EDSWMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMI 300
Query: 388 AGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
Y G ++AL + +GVKP+ ITF S L ACS + +GR + +
Sbjct: 301 TAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSS---LQDGRALHLLIDESGFD 357
Query: 448 PEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
EV +V M GR G L ++ + +M + + W + + A HG
Sbjct: 358 REVSVANALVTMYGRCGSLLDSAKLFSEMA-EKDLASWNSAIAAHAYHGR 406
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/627 (34%), Positives = 356/627 (56%), Gaps = 26/627 (4%)
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
RS + + +D+ F N +I +G L ++ MR + N+ T+ +L +
Sbjct: 48 RSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMR----AKNTITWNSLLIGIS 103
Query: 122 SN-SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
+ S ++E + +I D++ ++ Y + + FD M +D SW
Sbjct: 104 KDPSRMMEAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN 159
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
MIT Y + + E+A LF ++ + V+ ++ S + GD+ KA H + +
Sbjct: 160 TMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKAS--HFFKV-- 211
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVF-DMMEKRDLISWNSMLTGYIQNGQASEALLL 299
A + + +++ Y + VE A +F DM ++L++WN+M++GY++N + + L L
Sbjct: 212 APVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKL 271
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F M +PN + C+ L + QLGR+ H + S + D T +++ MY K
Sbjct: 272 FRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 331
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG+L A +F + +++V +WN +I+GY HG+ KAL F +M++ ++PD ITF
Sbjct: 332 CGELGDAWKLFEVM--KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 420 SILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPL 478
++L AC+HAGL++ G F M + V+P+ HY CMVD+LGRAG L EA +I+ MP
Sbjct: 390 AVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPF 449
Query: 479 PPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKL 533
P+ +V+G LL ACR+H E AA L QL ++ +V ++NIYA+ N+W +V ++
Sbjct: 450 RPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARV 509
Query: 534 REDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDL 593
R+ MK + K +S IE + F ++DR++P ++KK++ + ++K+AGY P+L
Sbjct: 510 RKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPEL 569
Query: 594 SCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYI 653
ALH+VE+E +E +L +HSEKLAVAFG + L + +QV KNLR+C DCH A +FIS I
Sbjct: 570 EFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEI 629
Query: 654 YRRKIIVRDANRFHHFEGGTCSCNDYW 680
+R+IIVRD RFHHF+ G+CSC DYW
Sbjct: 630 EKREIIVRDTTRFHHFKDGSCSCGDYW 656
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 316/537 (58%), Gaps = 10/537 (1%)
Query: 151 LVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSD 210
L++ + + G D KVFDEM R++ +W M++ Q E E L LF++ + G L D
Sbjct: 29 LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPD 88
Query: 211 SVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD 270
T+ SV L + VH Y + + +L + +S+ MY + G++ + V
Sbjct: 89 EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
M R++++WN+++ G QNG L L++ M+ S +P+ +T + ++S+ L +
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL-DTAENMFNDIHPSERNVSSWNVLIAG 389
G++ H I + + ++++ MY+KCG L D+ + + + HP + W+ +IA
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHP---DSVLWSSMIAA 265
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKP 448
YG HG G +A+ F QM +EG+ + +TF S+L ACSH GL ++G F M K +KP
Sbjct: 266 YGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKP 325
Query: 449 EVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYL 503
++HY C+VD+LGR+GCL EA MI+ MPL + +W LL ACRIH A +
Sbjct: 326 RLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEI 385
Query: 504 FQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTA 563
+L P+ + +VL+SNI+A++ +W++V K+R M+++ +KK S +E + F
Sbjct: 386 LRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMG 445
Query: 564 DRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIM 623
D+ +P +E+ ++ + E+K+ GY+PD + HD + E++E+ L HSEKLA+AFG+M
Sbjct: 446 DKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLM 505
Query: 624 NLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
N+ P + ++V KNLR+C+DCH A + IS I R+IIVRD +RFHHF+ G CSC DYW
Sbjct: 506 NIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 167/347 (48%), Gaps = 4/347 (1%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I + +G+ ++A +F+ + + WN M+ L L+ M G
Sbjct: 29 LINGHVQHGDLDSAIKVFDEMLERNVAT--WNAMVSGLIQFEFNENGLFLFREMHELGFL 86
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T VL+ CA GK VH +++ G+ + V ++L MY K G +G KV
Sbjct: 87 PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
M +R++V+W +I Q E L L+ + GL D +T+VSV S+ +L +
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+ Q +H AI + + +S+++MY++CG +E + E D + W+SM+ Y
Sbjct: 207 FQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAY 266
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKID 346
+G+ EA+ LF++M+ N VT L L+ AC++ G ++ G F ++ +K
Sbjct: 267 GFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPR 326
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
V+D+ + G LD AE M + P E +V W L++ +H
Sbjct: 327 LEHYTCVVDLLGRSGCLDEAEAMIRSM-PLEADVVIWKTLLSACRIH 372
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 151/308 (49%), Gaps = 10/308 (3%)
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
+ ++ N ++ + + G+++ A VFD M +R++ +WN+M++G IQ L LF E
Sbjct: 20 MRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFRE 79
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M P+ T ++ C L + G++ H Y++ + + + +++ MY K G
Sbjct: 80 MHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGS 139
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL 422
L E + + RNV +WN LIAG +GH L+ ++ M G++PD IT S++
Sbjct: 140 LGEGEKVIKAMRI--RNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVI 197
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPND 482
S+ + + +G++ A+ K V + ++ M + GCL ++ + P+
Sbjct: 198 SSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCE-HPDS 256
Query: 483 SVWGALLLACRIH--GEIAANYLFQLEPEHTGY--FVLMSNIYAASN---KWREVGKLRE 535
+W +++ A H GE A + Q+E E G +S +YA S+ K + +G +
Sbjct: 257 VLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKL 316
Query: 536 DMKNKGLK 543
++ GLK
Sbjct: 317 MVEKYGLK 324
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYG-EPNTARSLFNSIHN 70
++ S LA+L +QIH+ +G N A+ + + +I Y+ G ++ ++L + H
Sbjct: 196 VISSSAELATLFQGQQIHAEAIKAG-ANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHP 254
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
D S LW++MI AY +G E + L+ M + G+ N TF +L AC+ N L +G
Sbjct: 255 D---SVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGM 311
Query: 131 VVHGDII-RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITA 185
++ + G +VD+ + G D+ + M + D+V W +++A
Sbjct: 312 GFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSA 368
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/646 (33%), Positives = 351/646 (54%), Gaps = 45/646 (6%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WNT+I + E + + M+ G+ + ++ +L ACA + ++G+ +H
Sbjct: 265 WNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALA 324
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY---------- 186
++ G S V ++L+ Y KCG +D +F+ M +RD+++WT MIT+Y
Sbjct: 325 LKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAV 384
Query: 187 ---------------------EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLG 225
+ + AL LF + +EG+ T+ S+ +A G L
Sbjct: 385 EVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLK 444
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF--DMMEKRDLISWNSM 283
+Q + G+ + L + CI+ ++V MY RCG +E A +F +E SM
Sbjct: 445 SFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSM 504
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKP-NPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
+ GY +NG+ +EA+ LF Q+ + V + ++S C +G ++G++ H + + S
Sbjct: 505 ICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSG 564
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ + + NA + MY+KC ++D A +FN ++ +++ SWN L+AG+ +H G KAL
Sbjct: 565 LITETGVGNATVSMYSKCWNMDDAVRVFNTMN--MQDIVSWNGLVAGHVLHWQGDKALGI 622
Query: 403 FSQMLEEGVKPDHITFTSILSACSHA--GLIDEGRKCFADM-TKLSVKPEVKHYACMVDM 459
+ +M + G+KPD ITF I+SA H L+D R F M T+ ++KP ++HYA + +
Sbjct: 623 WKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISV 682
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYF 514
LGR G L EA I+ MPL P+ VW ALL +CRI+ ++AA + +EP+ +
Sbjct: 683 LGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSY 742
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
+L SN+Y+AS +W K+REDM+ KG +K + S I + I F+ DR +P K++Y
Sbjct: 743 ILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGKDIY 802
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
+E + +E GY+PD S L +VE+ ++ L YHS KLA FGI+ P +Q+
Sbjct: 803 SGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPIQIV 862
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KN+R+C DCH+ +++S + RRKI++RD + FH F G CSC DYW
Sbjct: 863 KNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 203/444 (45%), Gaps = 38/444 (8%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H+ + + + LG +I Y G A +F+ + S+ +I +
Sbjct: 117 RAVHAQFLK---LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSY--TALISGF 171
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ + E +EL+ M SGI N YTF +L AC N G VHG +++ G LS
Sbjct: 172 SKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCV 231
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ- 204
++ AL+ +Y KCG D ++F+EM RD+ SW +I++ + K +EA F+ Q
Sbjct: 232 FICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLC 291
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
+GL D ++ ++ +A +K Q +H A+ L + +S++ Y +CG+
Sbjct: 292 KGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAND 351
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQ-------------------------------NGQA 293
+F+ M RD+I+W M+T Y++ N
Sbjct: 352 VTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDG 411
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
S AL LF EM + + T +++AC L S ++ ++ G+++ + ++ + A+
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETAL 471
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VK 412
+DMY +CG ++ AE +F + +I GY +G +A+ F EG +
Sbjct: 472 VDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIV 531
Query: 413 PDHITFTSILSACSHAGLIDEGRK 436
D + TSILS C G + G++
Sbjct: 532 MDEVMSTSILSLCGSIGFHEMGKQ 555
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 174/382 (45%), Gaps = 36/382 (9%)
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
+ VH ++ D ++ AL+ Y K G D KVF +S ++VS+T +I+ + +
Sbjct: 116 ARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCI 248
++ +EA+ LF G+ + T V++ +A + D VHG + L + I
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233
Query: 249 QNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ-NSD 307
N+++ +Y +CG ++ +F+ M +RD+ SWN++++ ++ + EA F MQ
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKG 293
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD----- 362
K + + L++AC G++ H + ++ ++ ++++ Y KCG
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVT 353
Query: 363 --------------------------LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHG 396
LD+A +FN + +RN S+N ++AG + G
Sbjct: 354 DLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKM--PKRNCISYNAVLAGLSRNDDG 411
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACM 456
+ALE F +MLEEGV+ T TSI++AC ++ + K + +
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETAL 471
Query: 457 VDMLGRAGCLYEAFDMIKQMPL 478
VDM R G + +A + Q L
Sbjct: 472 VDMYTRCGRMEDAEKIFYQRSL 493
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 137/255 (53%), Gaps = 5/255 (1%)
Query: 225 GDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
GD A+AVH + ED+ + N++++ Y + G V A VF + +++S+ +++
Sbjct: 111 GDPDLARAVHAQFL--KLEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALI 168
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
+G+ ++ EA+ LF M +S +PN T + +++AC QLG + HG ++ +
Sbjct: 169 SGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLL 228
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ NA+M +Y KCG LD +F ++ ER+++SWN +I+ +A ++F
Sbjct: 229 SCVFICNALMGLYCKCGFLDLVLRLFEEM--PERDITSWNTVISSLVKEFKYDEAFDYFR 286
Query: 405 QM-LEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
M L +G+K DH + +++L+AC+ + +G++ A K+ ++ + + ++ +
Sbjct: 287 GMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKC 346
Query: 464 GCLYEAFDMIKQMPL 478
G + D+ + MP+
Sbjct: 347 GSANDVTDLFETMPI 361
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 109/212 (51%), Gaps = 9/212 (4%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLF--NSIH 69
++ +C L S + QI + G+++ + + ++ YT G A +F S+
Sbjct: 436 IITACGLLKSFKVSQQIQGFVMKFGILSNSC-IETALVDMYTRCGRMEDAEKIFYQRSLE 494
Query: 70 NDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILE 128
ND Y+ + +MI YA NG E + L+ + + G I + +L C S
Sbjct: 495 ND--YTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEM 552
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQ 188
GK +H +++G ++++ V A V MY+KC DD +VF+ M+++D+VSW ++ +
Sbjct: 553 GKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVL 612
Query: 189 AEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
+ ++AL +++K ++ G+ DS+T + SA
Sbjct: 613 HWQGDKALGIWKKMEKAGIKPDSITFALIISA 644
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/551 (36%), Positives = 310/551 (56%), Gaps = 73/551 (13%)
Query: 167 VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGD 226
+F + ++ W + ++ + + P +A+ LF + ++ + D T V A +L D
Sbjct: 69 IFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLD 128
Query: 227 VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN----- 281
V + VHGY ++ +QN IV +YA CG + AR VFD M +RD+I+WN
Sbjct: 129 VRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIAR 188
Query: 282 --------------------------SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
SM+ GY Q G++ EA+ LF EM+++ PN VT
Sbjct: 189 LVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
+ ++ AC +G+ LGR+ H + S + + + N ++DMY KCG L+ A +F+++
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNM-- 306
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
ER V SW+ +IAG HG AL F++M+ GVKP+ +TF IL ACSH G++++GR
Sbjct: 307 EERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGR 366
Query: 436 KCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
K FA MT+ + P ++HY CMVD+ RAG L EA + I MP+ PN VWGALL C++
Sbjct: 367 KYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKV 426
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H E A +L +L+P + GY+V++SNIYA + +W +V ++R+ M+++G
Sbjct: 427 HKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGT------- 479
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
W+++ ++ +K+ GY+P+ S L D+E++ +E L
Sbjct: 480 --------------------WEKLLQR-------MKLKGYVPNTSVVLLDMEEDQKEKFL 512
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLAV FG++ TP V+++ KNLRVC DCH+A + IS + R+I+VRD NRFH F
Sbjct: 513 YRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCF 572
Query: 670 EGGTCSCNDYW 680
+ G+CSC DYW
Sbjct: 573 KNGSCSCGDYW 583
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 213/411 (51%), Gaps = 40/411 (9%)
Query: 25 LRQIHSSL--TTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMI 82
L+Q+H+ L T S L + L A + +++ + A+ +F + D S WNT +
Sbjct: 31 LKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSF---SYAKLIFQLL--DASEVTHWNTCL 85
Query: 83 RAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFL 142
R++A + + L+ +R IS + YT FVLKAC+ + GK+VHG + + G
Sbjct: 86 RSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQ 145
Query: 143 SDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLV------------------------- 177
S+ ++Q +V +YA CG+ KVFD+M RD++
Sbjct: 146 SNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEM 205
Query: 178 ------SWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
SWT MI Y Q K +EA+ LF + + GLL + VT+V+V A +G+++ +
Sbjct: 206 PERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGR 265
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNG 291
+H ++ + + +++ + N+++ MY +CG +E A +FD ME+R ++SW++M+ G +G
Sbjct: 266 RIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHG 325
Query: 292 QASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN 351
+A +AL LF++M N+ KPN VT + ++ AC+++G + GRK+ + +
Sbjct: 326 RAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHY 385
Query: 352 AVM-DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
M D++++ G L A ++ P N W L+ G +H + + A E
Sbjct: 386 GCMVDLFSRAGLLQEAHEFIMNM-PIAPNGVVWGALLGGCKVHKNVKLAEE 435
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,509,558,051
Number of Sequences: 23463169
Number of extensions: 424503494
Number of successful extensions: 1173607
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10642
Number of HSP's successfully gapped in prelim test: 1656
Number of HSP's that attempted gapping in prelim test: 964823
Number of HSP's gapped (non-prelim): 58931
length of query: 680
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 530
effective length of database: 8,839,720,017
effective search space: 4685051609010
effective search space used: 4685051609010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)