BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037256
(680 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 557 bits (1436), Expect = e-158, Method: Compositional matrix adjust.
Identities = 282/677 (41%), Positives = 423/677 (62%), Gaps = 17/677 (2%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ +LK+C + +IH G + +++ A +I Y+ Y AR LF+ +
Sbjct: 156 FPSVLKACRTVIDGNKIHCLALKFGFM-WDVYVAASLIHLYSRYKAVGNARILFDEMPVR 214
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y +G+ E L L + +R + +S T +L AC G
Sbjct: 215 DMGS--WNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVT 268
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H I+ G S+ +V L+D+YA+ G+ D KVFD M VRDL+SW +I AYE E+
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNA-FLEDLCIQN 250
P A+ LFQ+ + + D +T++S+AS + QLGD+ ++V G+ + FLED+ I N
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN-SDCK 309
++V MYA+ G V+ AR VF+ + D+ISWN++++GY QNG ASEA+ +++ M+ +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
N T + ++ AC+ G+ + G K HG ++ + + +D + ++ DMY KCG L+ A ++
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F I N WN LIA +G HGHG KA+ F +ML+EGVKPDHITF ++LSACSH+G
Sbjct: 509 FYQI--PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Query: 430 LIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGAL 488
L+DEG+ CF M T + P +KHY CMVDM GRAG L A IK M L P+ S+WGAL
Sbjct: 567 LVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGAL 626
Query: 489 LLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLK 543
L ACR+HG +IA+ +LF++EPEH GY VL+SN+YA++ KW V ++R KGL+
Sbjct: 627 LSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLR 686
Query: 544 KPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDE 603
K +S +E ++ F+T ++ +P ++E+Y+++ ++ ++KM GY+PD L DVED+
Sbjct: 687 KTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDD 746
Query: 604 DREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDA 663
++EH+L HSE+LA+AF ++ + +++ KNLRVC DCHS +FIS I R+IIVRD+
Sbjct: 747 EKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDS 806
Query: 664 NRFHHFEGGTCSCNDYW 680
NRFHHF+ G CSC DYW
Sbjct: 807 NRFHHFKNGVCSCGDYW 823
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 275/517 (53%), Gaps = 29/517 (5%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
L + C L S + +H+ L S I Q + + AK++ Y G AR F+ I N Y
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQI-QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 75 SFLWNTMIRAYANNGHCVETLELYST-MRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ WN MI Y G+ E + +S M SG++ + TFP VLKAC + +++G +H
Sbjct: 119 A--WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIH 173
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
++ GF+ D YV A+L+ +Y++ + +FDEM VRD+ SW MI+ Y Q+ +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 194 EALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EAL L GL + DSVT+VS+ SA + GD + +H Y+I + +L + N +
Sbjct: 234 EALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+ +YA G + + VFD M RDLISWNS++ Y N Q A+ LF EM+ S +P+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENMFN 371
+T + L S + LG + R G+ + + D T+ NAV+ MYAK G +D+A +FN
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGL 430
+ +V SWN +I+GY +G +A+E ++ M EEG + + T+ S+L ACS AG
Sbjct: 409 WL--PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 431 IDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+ +G K + K + +V + DM G+ G L +A + Q+P N W L+
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNT-LI 524
Query: 491 AC---RIHGEIAANYLFQ------LEPEHTGYFVLMS 518
AC HGE A LF+ ++P+H + L+S
Sbjct: 525 ACHGFHGHGEKAV-MLFKEMLDEGVKPDHITFVTLLS 560
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 522 bits (1344), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/686 (38%), Positives = 422/686 (61%), Gaps = 18/686 (2%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
G ++ FY L+ S A L+QIH+ L GL L K+I +++G+ AR +
Sbjct: 17 GIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGF-LITKLIHASSSFGDITFARQV 75
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + + F WN +IR Y+ N H + L +YS M+ + +S +S+TFP +LKAC+ S
Sbjct: 76 FDDL--PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV--RDLVSWTVM 182
+ G+ VH + R GF +D +VQ L+ +YAKC + VF+ + + R +VSWT +
Sbjct: 134 HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
++AY Q +P EAL +F + ++ + D V +VSV +A L D+ + +++H ++
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA-SVVKMG 252
Query: 243 LE---DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLL 299
LE DL I S+ MYA+CG V A+++FD M+ +LI WN+M++GY +NG A EA+ +
Sbjct: 253 LEIEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 300 FDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
F EM N D +P+ ++ +SAC +GS + R + Y+ S+ + D + +A++DM+AK
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
CG ++ A +F+ +R+V W+ +I GYG+HG R+A+ + M GV P+ +TF
Sbjct: 371 CGSVEGARLVFD--RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+L AC+H+G++ EG F M + P+ +HYAC++D+LGRAG L +A+++IK MP+
Sbjct: 429 GLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ 488
Query: 480 PNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLR 534
P +VWGALL AC+ H GE AA LF ++P +TG++V +SN+YAA+ W V ++R
Sbjct: 489 PGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Query: 535 EDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLS 594
MK KGL K S +E ++ F D+ +P ++E+ ++VE + +K G++ +
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKD 608
Query: 595 CALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIY 654
+LHD+ DE+ E L HSE++A+A+G+++ +++TKNLR C +CH+A + IS +
Sbjct: 609 ASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLV 668
Query: 655 RRKIIVRDANRFHHFEGGTCSCNDYW 680
R+I+VRD NRFHHF+ G CSC DYW
Sbjct: 669 DREIVVRDTNRFHHFKDGVCSCGDYW 694
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust.
Identities = 277/708 (39%), Positives = 412/708 (58%), Gaps = 47/708 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI---IIKYTTYGEPNTARSLFNSIHND 71
LL +C L SLR IH+ + GL N L I I+ G P A S+F +I
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP-YAISVFKTIQEP 97
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
+WNTM R +A + V L+LY M G+ NSYTFPFVLK+CA + EG+
Sbjct: 98 NL--LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFD---------------------- 169
+HG +++ G D YV +L+ MY + G+ +D KVFD
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 170 ---------EMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
E+ V+D+VSW MI+ Y + +EAL LF+ + + D T+V+V SA
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
Q G + + VH + + F +L I N+++ +Y++CG +E A +F+ + +D+ISW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N+++ GY EALLLF EM S PN VT L ++ AC +LG+ +GR H YI
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 341 SNMKID--ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRK 398
+ ++LR +++DMYAKCGD++ A +FN I +++SSWN +I G+ MHG
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAMHGRADA 453
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMV 457
+ + FS+M + G++PD ITF +LSACSH+G++D GR F MT+ + P+++HY CM+
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513
Query: 458 DMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEIA-----ANYLFQLEPEHTG 512
D+LG +G EA +MI M + P+ +W +LL AC++HG + A L ++EPE+ G
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573
Query: 513 YFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKE 572
+VL+SNIYA++ +W EV K R + +KG+KK S IE + F D+ +P +E
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633
Query: 573 VYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
+Y +E M V ++ AG++PD S L ++E+E +E L +HSEKLA+AFG+++ P +
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ KNLRVC +CH A + IS IY+R+II RD RFHHF G CSCNDYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 257/675 (38%), Positives = 405/675 (60%), Gaps = 26/675 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ G +N + ++ Y G+ +++ L S + WNT++ +
Sbjct: 222 KQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT--WNTVLSSL 277
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD- 144
N +E LE M G+ + +T VL AC+ ++ GK +H ++ G L +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
S+V +ALVDMY C Q G +VFD M R + W MI Y Q E +EAL+LF ++
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 205 E-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVE 263
GLL++S T+ V A + G + +A+HG+ + D +QN+++ MY+R G ++
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-----------CKPNP 312
A +F ME RDL++WN+M+TGY+ + +ALLL +MQN + KPN
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+T + ++ +C L + G++ H Y I +N+ D + +A++DMYAKCG L + +F+
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
I ++NV +WNV+I YGMHG+G++A++ M+ +GVKP+ +TF S+ +ACSH+G++D
Sbjct: 578 I--PQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVD 635
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS-VWGALLL 490
EG + F M V+P HYAC+VD+LGRAG + EA+ ++ MP N + W +LL
Sbjct: 636 EGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLG 695
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
A RIH GEIAA L QLEP ++VL++NIY+++ W + ++R +MK +G++K
Sbjct: 696 ASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE 755
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
S IE+G ++ F D +P +++ +E++ ++ GY+PD SC LH+VE++++
Sbjct: 756 PGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEK 815
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E +L HSEKLA+AFGI+N +P +++V KNLRVCNDCH A +FIS I R+II+RD R
Sbjct: 816 EILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRR 875
Query: 666 FHHFEGGTCSCNDYW 680
FH F+ GTCSC DYW
Sbjct: 876 FHRFKNGTCSCGDYW 890
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 9/405 (2%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W ++R+ + E + Y M GI ++Y FP +LKA A + GK +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 138 RTGFLSDSYVQA-ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+ G+ DS A LV++Y KCG KVFD +S R+ VSW +I++ EK E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLG---DVLKAQAVHGYAICNAFLEDLCIQNSIV 253
F+ E + S T+VSV +A L ++ + VH Y + L I N++V
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLV 243
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
AMY + G + ++++ RDL++WN++L+ QN Q EAL EM +P+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 314 TALILVSACTYLGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T ++ AC++L + G++ H Y + N ++ ++ + +A++DMY C + + +F+
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITFTSILSACSHAGLI 431
+ +R + WN +IAGY + H ++AL F M E G+ + T ++ AC +G
Sbjct: 364 MF--DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ K + + ++DM R G + A + +M
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/680 (39%), Positives = 410/680 (60%), Gaps = 19/680 (2%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIK--YTTYGEPNTARSLFN 66
+ LLK C A LR +IH L SG +L L A ++ Y + N AR +F+
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGF---SLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ S WNT++ Y+ NG LE+ +M + + T VL A ++ LI
Sbjct: 195 RMPERDLVS--WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
GK +HG +R+GF S + ALVDMYAKCG + ++FD M R++VSW MI AY
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
Q E P+EA+++FQK EG+ V+++ A LGD+ + + +H ++ ++
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ NS+++MY +C V+ A +F ++ R L+SWN+M+ G+ QNG+ +AL F +M++
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
KP+ T + +++A L + HG ++ S + + + A++DMYAKCG + A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F+ + SER+V++WN +I GYG HG G+ ALE F +M + +KP+ +TF S++SACS
Sbjct: 493 RLIFDMM--SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 550
Query: 427 HAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H+GL++ G KCF M + S++ + HY MVD+LGRAG L EA+D I QMP+ P +V+
Sbjct: 551 HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVY 610
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
GA+L AC+IH E AA LF+L P+ GY VL++NIY A++ W +VG++R M +
Sbjct: 611 GAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQ 670
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
GL+K S++E ++ F + +P K++Y +E + IK AGY+PD + L V
Sbjct: 671 GLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GV 729
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
E++ +E +L+ HSEKLA++FG++N T + V KNLRVC DCH+A ++IS + R+I+V
Sbjct: 730 ENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVV 789
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD RFHHF+ G CSC DYW
Sbjct: 790 RDMQRFHHFKNGACSCGDYW 809
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 503 bits (1295), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/708 (37%), Positives = 413/708 (58%), Gaps = 47/708 (6%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKI--IIKYTTYGEPNTARSLFNSIHNDK 72
L++ C L L+Q H + +G + + +K+ + +++ AR +F+ I K
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDP-YSASKLFAMAALSSFASLEYARKVFDEI--PK 92
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKV 131
SF WNT+IRAYA+ V ++ + M S N YTFPF++KA A S + G+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+HG +++ SD +V +L+ Y CG D CKVF + +D+VSW MI + Q
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P++AL LF+K + E + + VT+V V SA ++ ++ + V Y N +L + N+
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 252 IVAMYARCGNVEKARLVFDMME-------------------------------KRDLISW 280
++ MY +CG++E A+ +FD ME ++D+++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 281 NSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
N++++ Y QNG+ +EAL++F E+Q + K N +T + +SAC +G+ +LGR H YI
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKA 399
++++ + +A++ MY+KCGDL+ + +FN + +R+V W+ +I G MHG G +A
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVD 458
++ F +M E VKP+ +TFT++ ACSH GL+DE F M + + PE KHYAC+VD
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGY 513
+LGR+G L +A I+ MP+PP+ SVWGALL AC+IH E+A L +LEP + G
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 514 FVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEV 573
VL+SNIYA KW V +LR+ M+ GLKK S IE I F + D +P ++V
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Query: 574 YKKVESMAVEIKMAGYMPDLSCALHDVEDED-REHMLNYHSEKLAVAFGIMNLTPEAVVQ 632
Y K+ + ++K GY P++S L +E+E+ +E LN HSEKLA+ +G+++ V++
Sbjct: 631 YGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIR 690
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V KNLRVC DCHS + IS +Y R+IIVRD RFHHF G CSCND+W
Sbjct: 691 VIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 251/656 (38%), Positives = 398/656 (60%), Gaps = 18/656 (2%)
Query: 40 QALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYS 99
+AL ++ + E +LFN + DK+ F WN++I A +G E L +S
Sbjct: 7 KALFCSVSRLLHTERHTERQNLTTLFNR-YVDKTDVFSWNSVIADLARSGDSAEALLAFS 65
Query: 100 TMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG 159
+MR+ + +FP +KAC+S I GK H G+ SD +V +AL+ MY+ CG
Sbjct: 66 SMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG 125
Query: 160 QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF------QKTQQEGLLSDSVT 213
+ +D KVFDE+ R++VSWT MI Y+ +A+ LF + + + DS+
Sbjct: 126 KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMG 185
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG--NVEKARLVFDM 271
+VSV SA ++ +++H + I F + + N+++ YA+ G V AR +FD
Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQ 245
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQL 330
+ +D +S+NS+++ Y Q+G ++EA +F + +N N +T ++ A ++ G+ ++
Sbjct: 246 IVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI 305
Query: 331 GRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
G+ H +I ++ D + +++DMY KCG ++TA F+ + +NV SW +IAGY
Sbjct: 306 GKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM--KNKNVRSWTAMIAGY 363
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPE 449
GMHGH KALE F M++ GV+P++ITF S+L+ACSHAGL EG + F M + V+P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 450 VKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLF 504
++HY CMVD+LGRAG L +A+D+I++M + P+ +W +LL ACRIH EI+ LF
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 505 QLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTAD 564
+L+ + GY++L+S+IYA + +W++V ++R MKN+GL KP FS++E ++ F D
Sbjct: 484 ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGD 543
Query: 565 RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMN 624
+P +++Y+ + + ++ AGY+ + S HDV++E++E L HSEKLA+AFGIMN
Sbjct: 544 EEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMN 603
Query: 625 LTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
P + V V KNLRVC+DCH+ + IS I R+ +VRDA RFHHF+ G CSC DYW
Sbjct: 604 TVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/678 (38%), Positives = 389/678 (57%), Gaps = 49/678 (7%)
Query: 14 QLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKS 73
Q+L + + +LR +HS + L + LG K++ Y + + +AR +F+ I +
Sbjct: 47 QVLDTYPDIRTLRTVHSRIILEDLRCNS-SLGVKLMRAYASLKDVASARKVFDEI--PER 103
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ N MIR+Y NNG E ++++ TM + + YTFP VLKAC+ + I+ G+ +H
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIH 163
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G + G S +V LV MY KCG + V DEMS RD+VSW ++ Y Q ++ +
Sbjct: 164 GSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFD 223
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+AL + ++ + + D+ T+ S+ AV N E
Sbjct: 224 DALEVCREMESVKISHDAGTMASLLPAVS-----------------NTTTE--------- 257
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
NV + +F M K+ L+SWN M+ Y++N EA+ L+ M+ +P+ V
Sbjct: 258 -------NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDI 373
+ ++ AC + LG+K HGYI + + L NA++DMYAKCG L+ A ++F ++
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 374 HPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDE 433
R+V SW +I+ YG G G A+ FS++ + G+ PD I F + L+ACSHAGL++E
Sbjct: 371 --KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 434 GRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
GR CF MT + P ++H ACMVD+LGRAG + EA+ I+ M + PN+ VWGALL AC
Sbjct: 429 GRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGAC 488
Query: 493 RIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAA 547
R+H G +AA+ LFQL PE +GY+VL+SNIYA + +W EV +R MK+KGLKK
Sbjct: 489 RVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPG 548
Query: 548 FSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREH 607
S +E + I F DR +P E+Y++++ + ++K GY+PD ALHDVE+ED+E
Sbjct: 549 ASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKET 608
Query: 608 MLNYHSEKLAVAFGIMNLTPEA-----VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
L HSEKLA+ F +MN E +++TKNLR+C DCH A + IS I R+II+RD
Sbjct: 609 HLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRD 668
Query: 663 ANRFHHFEGGTCSCNDYW 680
NRFH F G CSC DYW
Sbjct: 669 TNRFHVFRFGVCSCGDYW 686
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 17/237 (7%)
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI--- 252
L L QK+ QE T+ + + D+ + VH I LEDL +S+
Sbjct: 31 LELDQKSPQE-------TVFLLGQVLDTYPDIRTLRTVHSRII----LEDLRCNSSLGVK 79
Query: 253 -VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
+ YA +V AR VFD + +R++I N M+ Y+ NG E + +F M + +P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
T ++ AC+ G+ +GRK HG + + N ++ MY KCG L A + +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
++ S R+V SWN L+ GY + ALE +M + D T S+L A S+
Sbjct: 200 EM--SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/662 (37%), Positives = 383/662 (57%), Gaps = 15/662 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R IH G ++ L LG+ I+ Y + AR +F+ + + LWNTMI Y
Sbjct: 139 RVIHGQAVVDGCDSELL-LGSNIVKMYFKFWRVEDARKVFDRMPEKDT--ILWNTMISGY 195
Query: 86 ANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
N VE+++++ + S ++ T +L A A + G +H +TG S
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
YV + +Y+KCG+ G +F E D+V++ MI Y + E +L LF++
Sbjct: 256 DYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEK 264
G S T+VS+ G L + A+HGY + + FL + ++ +Y++ +E
Sbjct: 316 SGARLRSSTLVSLVPVSGHL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 265 ARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTY 324
AR +FD ++ L SWN+M++GY QNG +A+ LF EMQ S+ PNPVT ++SAC
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQ 432
Query: 325 LGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
LG+ LG+ H + +++ + + A++ MYAKCG + A +F+ + +++N +WN
Sbjct: 433 LGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM--TKKNEVTWN 490
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-K 443
+I+GYG+HG G++AL F +ML G+ P +TF +L ACSHAGL+ EG + F M +
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
+P VKHYACMVD+LGRAG L A I+ M + P SVW LL ACRIH
Sbjct: 551 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
+ LF+L+P++ GY VL+SNI++A + + +R+ K + L K +++IE G+
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F + D+ +P KE+Y+K+E + +++ AGY P+ ALHDVE+E+RE M+ HSE+LA+
Sbjct: 671 VFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 730
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
AFG++ P +++ KNLRVC DCH+ + IS I R I+VRDANRFHHF+ G CSC D
Sbjct: 731 AFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD 790
Query: 679 YW 680
YW
Sbjct: 791 YW 792
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 236/491 (48%), Gaps = 17/491 (3%)
Query: 12 YDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
Y K ++ L Q H+ + G N + L K+ + + G AR +F S+
Sbjct: 23 YLDFFKRSTSISHLAQTHAQIILHGFRND-ISLLTKLTQRLSDLGAIYYARDIFLSVQ-- 79
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLILEGK 130
+ FL+N ++R ++ N +L +++ +R+S + NS T+ F + A + G+
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
V+HG + G S+ + + +V MY K + +D KVFD M +D + W MI+ Y + E
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199
Query: 191 KPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ 249
E++ +F+ E D+ T++ + AV +L ++ +H A +
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL 259
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCK 309
+++Y++CG ++ +F K D++++N+M+ GY NG+ +L LF E+ S +
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
T LVS G L HGY + SN A++ A+ +Y+K ++++A +
Sbjct: 320 LRSST---LVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
F++ E+++ SWN +I+GY +G A+ F +M + P+ +T T ILSAC+ G
Sbjct: 377 FDE--SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLPPNDSVWG 486
+ G+ + + + ++ M + G + EA FD++ + N+ W
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK----KNEVTWN 490
Query: 487 ALLLACRIHGE 497
++ +HG+
Sbjct: 491 TMISGYGLHGQ 501
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 484 bits (1246), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/671 (38%), Positives = 395/671 (58%), Gaps = 16/671 (2%)
Query: 22 LASLRQIHSSLTTSGLI-----NQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSF 76
+SLR +H G I + +G ++ Y ++AR +F+ + S
Sbjct: 205 FSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS- 263
Query: 77 LWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN++I Y +NG + L ++ M SGI + T V CA + LI G+ VH
Sbjct: 264 -WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
++ F + L+DMY+KCG D VF EMS R +VS+T MI Y + EA+
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
LF++ ++EG+ D T+ +V + + + + + VH + N D+ + N+++ MY
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 257 ARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNPVTA 315
A+CG++++A LVF M +D+ISWN+++ GY +N A+EAL LF+ + + P+ T
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP 375
++ AC L + GR+ HGYI+ + D + N+++DMYAKCG L A +F+DI
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI-- 560
Query: 376 SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGR 435
+ +++ SW V+IAGYGMHG G++A+ F+QM + G++ D I+F S+L ACSH+GL+DEG
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 436 KCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI 494
+ F M + ++P V+HYAC+VDML R G L +A+ I+ MP+PP+ ++WGALL CRI
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 495 H-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
H E A +F+LEPE+TGY+VLM+NIYA + KW +V +LR+ + +GL+K S
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
IE + F D NP + + + + + GY P AL D E+ ++E L
Sbjct: 741 WIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEAL 800
Query: 610 NYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHF 669
HSEKLA+A GI++ +++VTKNLRVC DCH +F+S + RR+I++RD+NRFH F
Sbjct: 801 CGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQF 860
Query: 670 EGGTCSCNDYW 680
+ G CSC +W
Sbjct: 861 KDGHCSCRGFW 871
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 251/497 (50%), Gaps = 13/497 (2%)
Query: 4 LGPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARS 63
+ P T QL L +++ + + +G + + +LG+K+ + YT G+ A
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDS-NLGSKLSLMYTNCGDLKEASR 150
Query: 64 LFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASN 123
+F+ + +K+ WN ++ A +G ++ L+ M SG+ +SYTF V K+ +S
Sbjct: 151 VFDEVKIEKA--LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 124 SLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMI 183
+ G+ +HG I+++GF + V +LV Y K + D KVFDEM+ RD++SW +I
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 184 TAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
Y E+ L +F + G+ D TIVSV + + +AVH + F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 244 EDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
+ N+++ MY++CG+++ A+ VF M R ++S+ SM+ GY + G A EA+ LF+EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 304 QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDL 363
+ P+ T +++ C G++ H +I +++ D + NA+MDMYAKCG +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 364 DTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSIL 422
AE +F+++ +++ SWN +I GY + + +AL F+ +LEE PD T +L
Sbjct: 449 QEAELVFSEMRV--KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 423 SACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA---FDMIKQMPLP 479
AC+ D+GR+ + + + +VDM + G L A FD I L
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 480 PNDSVWGALLLACRIHG 496
W ++ +HG
Sbjct: 567 S----WTVMIAGYGMHG 579
Score = 205 bits (522), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 211/398 (53%), Gaps = 4/398 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
NT +R + +G+ ++L + I + T VL+ CA + + +GK V I
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
GF+ DS + + L MY CG + +VFDE+ + + W +++ ++ ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYAR 258
F+K G+ DS T V+ + L V + +HG+ + + F E + NS+VA Y +
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 259 CGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
V+ AR VFD M +RD+ISWNS++ GY+ NG A + L +F +M S + + T + +
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ C LGR H + + + N ++DMY+KCGDLD+A+ +F ++ S+R
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM--SDR 360
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V S+ +IAGY G +A++ F +M EEG+ PD T T++L+ C+ L+DEG++
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 439 ADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
+ + + ++ ++DM + G + EA + +M
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/730 (35%), Positives = 405/730 (55%), Gaps = 81/730 (11%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q H+ + SG N ++ AK+I Y+ Y N A + SI + YSF +++I A
Sbjct: 36 QAHARILKSGAQNDG-YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSF--SSLIYALT 92
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
+++ ++S M G+ +S+ P + K CA S GK +H +G D++
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMSVRD------------------------------- 175
VQ ++ MY +CG+ D KVFD MS +D
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 176 ----LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQ 231
+VSW +++ + ++ +EA+++FQK G D VT+ SV +VG + +
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 232 AVHGYAICNAFLEDLCIQNSIVAMYARCGNV----------------------------- 262
+HGY I L+D C+ ++++ MY + G+V
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 263 --EKARLVFDMMEKR----DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTAL 316
+KA +F++ +++ +++SW S++ G QNG+ EAL LF EMQ + KPN VT
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS 376
++ AC + + GR HG+ + ++ + + +A++DMYAKCG ++ ++ +FN + P+
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN-MMPT 451
Query: 377 ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRK 436
+N+ WN L+ G+ MHG ++ + F ++ +KPD I+FTS+LSAC GL DEG K
Sbjct: 452 -KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 437 CFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH 495
F M++ +KP ++HY+CMV++LGRAG L EA+D+IK+MP P+ VWGALL +CR+
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 496 -----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSV 550
EIAA LF LEPE+ G +VL+SNIYAA W EV +R M++ GLKK S
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 551 IEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLN 610
I+ + D+ +P ++ +K++ ++ E++ +G+ P+L ALHDVE++++E ML
Sbjct: 631 IQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLW 690
Query: 611 YHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFE 670
HSEKLAV FG++N +QV KNLR+C DCH+ +FIS R+I +RD NRFHHF+
Sbjct: 691 GHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFK 750
Query: 671 GGTCSCNDYW 680
G CSC D+W
Sbjct: 751 DGICSCGDFW 760
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/661 (36%), Positives = 372/661 (56%), Gaps = 11/661 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
+Q+H+ T G + GA + + Y + TA F + + LWN M+ AY
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNL-YAKCADIETALDYF--LETEVENVVLWNVMLVAY 465
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ ++ M+ I N YT+P +LK C + G+ +H II+T F ++
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
YV + L+DMYAK G+ D + + +D+VSWT MI Y Q ++AL F++
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ SD V + + SA L + + Q +H A + F DL QN++V +Y+RCG +E++
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
L F+ E D I+WN++++G+ Q+G EAL +F M N T V A +
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ + G++ H I + + + NA++ MYAKCG + AE F ++ S +N SWN
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV--STKNEVSWNA 763
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKL 444
+I Y HG G +AL+ F QM+ V+P+H+T +LSACSH GL+D+G F M ++
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+ P+ +HY C+VDML RAG L A + I++MP+ P+ VW LL AC +H GE A
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A++L +LEPE + +VL+SN+YA S KW R+ MK KG+KK S IE I
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F+ D+ +P E+++ + + GY+ D L++++ E ++ ++ HSEKLA++
Sbjct: 944 FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 1003
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FG+++L + V KNLRVCNDCH+ +F+S + R+IIVRDA RFHHFEGG CSC DY
Sbjct: 1004 FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
Query: 680 W 680
W
Sbjct: 1064 W 1064
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 237/485 (48%), Gaps = 10/485 (2%)
Query: 9 EGFYDQLLKSCN----FLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
EG + +L++C + QIH+ + GL + + + +I Y+ G + AR +
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNGFVDLARRV 244
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ + S W MI + N E + L+ M GI Y F VL AC
Sbjct: 245 FDGLRLKDHSS--WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+ G+ +HG +++ GF SD+YV ALV +Y G +F MS RD V++ +I
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Q E+A+ LF++ +GL DS T+ S+ A G + + Q +H Y F
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
+ I+ +++ +YA+C ++E A F E +++ WN ML Y + +F +MQ
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ PN T ++ C LG +LG + H II +N +++A + + ++DMYAK G LD
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
TA ++ I + ++V SW +IAGY + KAL F QML+ G++ D + T+ +SA
Sbjct: 543 TAWDIL--IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 425 CSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV 484
C+ + EG++ A ++ +V + R G + E++ +Q N +
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIA- 659
Query: 485 WGALL 489
W AL+
Sbjct: 660 WNALV 664
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 209/435 (48%), Gaps = 13/435 (2%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
R++F ++ + SF I Y + + + S R GI N T ++L+ C
Sbjct: 39 TRTVFPTLCGTRRASF---AAISVYISEDESFQEKRIDSVENR-GIRPNHQTLKWLLEGC 94
Query: 121 -ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSW 179
+N + EG+ +H I++ G S+ + L D Y G KVFDEM R + +W
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTW 154
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV--GQLG-DVLKAQAVHGY 236
MI E LF + E + + T V A G + DV+ + +H
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV--EQIHAR 212
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
+ + + N ++ +Y+R G V+ AR VFD + +D SW +M++G +N +EA
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDM 356
+ LF +M P P ++SAC + S ++G + HG ++ D + NA++ +
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 332
Query: 357 YAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHI 416
Y G+L +AE++F+++ S+R+ ++N LI G G+G KA+E F +M +G++PD
Sbjct: 333 YFHLGNLISAEHIFSNM--SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 417 TFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
T S++ ACS G + G++ A TKL K ++++ + + A D +
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 477 PLPPNDSVWGALLLA 491
+ N +W +L+A
Sbjct: 451 EV-ENVVLWNVMLVA 464
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 259/721 (35%), Positives = 400/721 (55%), Gaps = 55/721 (7%)
Query: 7 STEGFYDQLLKSCNFLAS---LRQIHSSLTTSGLINQAL-HLGAKIIIK-YTTYGEPNTA 61
S++ L+K+ + S +Q+H+ + Q+L H A I+I YT + A
Sbjct: 3 SSKALIKTLIKNPTRIKSKSQAKQLHAQFIRT----QSLSHTSASIVISIYTNLKLLHEA 58
Query: 62 RSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
LF ++ + + W ++IR + + + L + MR SG + FP VLK+C
Sbjct: 59 LLLFKTLKSPPVLA--WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKC---GQTDDGCKVFDEMSVR---- 174
+ G+ VHG I+R G D Y AL++MYAK G VFDEM R
Sbjct: 117 MMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNS 176
Query: 175 -----------------------------DLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
D+VS+ +I Y Q+ E+AL + ++
Sbjct: 177 GDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTT 236
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
L DS T+ SV + DV+K + +HGY I D+ I +S+V MYA+ +E +
Sbjct: 237 DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF + RD ISWNS++ GY+QNG+ +EAL LF +M + KP V ++ AC +L
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ LG++ HGY++ + + +A++DMY+KCG++ A +F+ ++ + SW
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE--VSWTA 414
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL- 444
+I G+ +HGHG +A+ F +M +GVKP+ + F ++L+ACSH GL+DE F MTK+
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 474
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
+ E++HYA + D+LGRAG L EA++ I +M + P SVW LL +C +H E
Sbjct: 475 GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A +F ++ E+ G +VLM N+YA++ +W+E+ KLR M+ KGL+K A S IE G
Sbjct: 535 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHG 594
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F + DR +P ++ + ++++ +++ GY+ D S LHDV++E + +L HSE+LAVA
Sbjct: 595 FVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVA 654
Query: 620 FGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDY 679
FGI+N P ++VTKN+R+C DCH A +FIS I R+IIVRD +RFHHF G CSC DY
Sbjct: 655 FGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714
Query: 680 W 680
W
Sbjct: 715 W 715
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/708 (34%), Positives = 404/708 (57%), Gaps = 47/708 (6%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
L C L ++Q+H+ + + +IN L+ + ++ + A ++F+SI + S
Sbjct: 19 LSFCKSLNHIKQLHAHILRT-VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPE-S 76
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGD 135
++N +R + + T+ Y +R G + ++F +LKA + S + EG +HG
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 136 IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEA 195
+ L D +V+ +DMYA CG+ + VFDEMS RD+V+W MI Y + +EA
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN--------------- 240
LF++ + ++ D + + ++ SA G+ G++ +A++ + I N
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 241 -----------AFLEDLCIQN-----SIVAMYARCGNVEKARLVFDMMEKRDLISWNSML 284
F + ++N ++V+ Y++CG ++ A+++FD EK+DL+ W +M+
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 285 TGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
+ Y+++ EAL +F+EM S KP+ V+ ++SAC LG + H I + ++
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 345 IDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFS 404
+ ++ NA+++MYAKCG LD ++F + RNV SW+ +I MHG AL F+
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKM--PRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 405 QMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRA 463
+M +E V+P+ +TF +L CSH+GL++EG+K FA MT + ++ P+++HY CMVD+ GRA
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMS 518
L EA ++I+ MP+ N +WG+L+ ACRIHGE+ AA + +LEP+H G VLMS
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 554
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA +W +V +R M+ K + K S I+ F D+ + E+Y K++
Sbjct: 555 NIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLD 614
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE------AVVQ 632
+ ++K+AGY+PD L DVE+E+++ ++ +HSEKLA+ FG+MN E V++
Sbjct: 615 EVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIR 674
Query: 633 VTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ KNLRVC DCH F+ +S +Y R+IIVRD RFH ++ G CSC DYW
Sbjct: 675 IVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 258/723 (35%), Positives = 403/723 (55%), Gaps = 62/723 (8%)
Query: 15 LLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+ K+C ++S+R H+ +G I+ +G ++ Y+ + AR +F+ +
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVF-VGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRS-GISSNSYTFPFVLKACASNSLILEGK 130
S WN++I +YA G LE++S M G ++ T VL CAS GK
Sbjct: 192 DVVS--WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+H + + + + +V LVDMYAKCG D+ VF MSV+D+VSW M+ Y Q
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 191 KPEEALILFQKTQQE-----------------------------------GLLSDSVTIV 215
+ E+A+ LF+K Q+E G+ + VT++
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 216 SVASAVGQLGDVLKAQAVHGYAIC-------NAFLEDLCIQNSIVAMYARCGNVEKARLV 268
SV S +G ++ + +H YAI N ++ + N ++ MYA+C V+ AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 269 FDMM--EKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDC--KPNPVTALILVSACTY 324
FD + ++RD+++W M+ GY Q+G A++AL L EM DC +PN T + AC
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 325 LGSRQLGRKFHGYII-NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + ++G++ H Y + N + + N ++DMYAKCG + A +F+++ +N +W
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM--MAKNEVTW 547
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-T 442
L+ GYGMHG+G +AL F +M G K D +T +L ACSH+G+ID+G + F M T
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI---- 498
V P +HYAC+VD+LGRAG L A +I++MP+ P VW A L CRIHG++
Sbjct: 608 VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGE 667
Query: 499 -AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
AA + +L H G + L+SN+YA + +W++V ++R M++KG+KK S +E K
Sbjct: 668 YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT 727
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F D+ +P+ KE+Y+ + IK GY+P+ ALHDV+DE+++ +L HSEKLA
Sbjct: 728 TTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLA 787
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+A+GI+ A +++TKNLRVC DCH+AF ++S I II+RD++RFHHF+ G+CSC
Sbjct: 788 LAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCK 847
Query: 678 DYW 680
YW
Sbjct: 848 GYW 850
Score = 278 bits (711), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 275/529 (51%), Gaps = 51/529 (9%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY 74
+ C ++ ++ IH L + G++ L+L + +I Y + G + A SL +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILT--LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAG 91
Query: 75 SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHG 134
+ WN++IR+Y +NG + L L+ M + ++YTFPFV KAC S + G+ H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 135 DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
+ TGF+S+ +V ALV MY++C D KVFDEMSV D+VSW +I +Y + KP+
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 195 ALILFQKTQQE-GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
AL +F + E G D++T+V+V LG + +H +A+ + ++++ + N +V
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ--------- 304
MYA+CG +++A VF M +D++SWN+M+ GY Q G+ +A+ LF++MQ
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 305 --------------------------NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYI 338
+S KPN VT + ++S C +G+ G++ H Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 339 INSNMKI-------DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYG 391
I + + + + N ++DMYAKC +DTA MF+ + P ER+V +W V+I GY
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 392 MHGHGRKALEFFSQMLEEG--VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
HG KALE S+M EE +P+ T + L AC+ + G++ A + + +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR-NQQNA 510
Query: 450 VKHYA--CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
V + C++DM + G + +A + M + N+ W +L+ +HG
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/704 (35%), Positives = 379/704 (53%), Gaps = 74/704 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
++ Y+ G+ ++ F+ + S S W TMI Y N G + + + M + GI
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVS--WTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCG-------- 159
+T VL + A+ + GK VH I++ G + V +L++MYAKCG
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 160 -----------------------QTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
Q D F++M+ RD+V+W MI+ + Q AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 197 ILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+F K ++ LLS D T+ SV SA L + + +H + + F + N++++M
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 256 YARCGNVEKARL---------------------------------VFDMMEKRDLISWNS 282
Y+RCG VE AR +F ++ RD+++W +
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
M+ GY Q+G EA+ LF M +PN T ++S + L S G++ HG + S
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
++ NA++ MYAK G++ +A F D+ ER+ SW +I HGH +ALE
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAF-DLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 403 FSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLG 461
F ML EG++PDHIT+ + SAC+HAGL+++GR+ F M + + P + HYACMVD+ G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 462 RAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVL 516
RAG L EA + I++MP+ P+ WG+LL ACR+H G++AA L LEPE++G +
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSA 622
Query: 517 MSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKK 576
++N+Y+A KW E K+R+ MK+ +KK FS IE + F D +P E+Y
Sbjct: 623 LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMT 682
Query: 577 VESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKN 636
++ + EIK GY+PD + LHD+E+E +E +L +HSEKLA+AFG+++ + +++ KN
Sbjct: 683 MKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKN 742
Query: 637 LRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
LRVCNDCH+A +FIS + R+IIVRD RFHHF+ G CSC DYW
Sbjct: 743 LRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 204/458 (44%), Gaps = 87/458 (18%)
Query: 137 IRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL 196
+RT F ++ + A Y+K G D C+ FD++ RD VSWT MI Y+ + +A+
Sbjct: 77 LRTAFSWNTVLSA-----YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAI 131
Query: 197 ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMY 256
+ +EG+ T+ +V ++V + + VH + + ++ + NS++ MY
Sbjct: 132 RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 257 ARCGNVEKARLVFD-------------------------------MMEKRDLISWNSMLT 285
A+CG+ A+ VFD M +RD+++WNSM++
Sbjct: 192 AKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 286 GYIQNGQASEALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMK 344
G+ Q G AL +F +M ++S P+ T ++SAC L +G++ H +I+ +
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 345 IDATLRNAVMDMYAKC---------------------------------GDLDTAENMFN 371
I + NA++ MY++C GD++ A+N+F
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF- 370
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +R+V +W +I GY HG +A+ F M+ G +P+ T ++LS S +
Sbjct: 371 -VSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASL 429
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLY---EAFDMIKQMPLPPNDSV-WGA 487
G++ K V ++ M +AG + AFD+I+ D+V W +
Sbjct: 430 SHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR----CERDTVSWTS 485
Query: 488 LLLACRIHG------EIAANYLFQ-LEPEHTGYFVLMS 518
+++A HG E+ L + L P+H Y + S
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 133/307 (43%), Gaps = 61/307 (19%)
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
AQ VH I + + + + N+++ +Y++ G AR +FD M R SWN++L+ Y +
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 290 NGQASEALLLFDEMQNSDC-------------------------------KPNPVTALIL 318
G FD++ D +P T +
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN-----DI 373
+++ + G+K H +I+ ++ + ++ N++++MYAKCGD A+ +F+ DI
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 374 HP------------------------SERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE 409
+ER++ +WN +I+G+ G+ +AL+ FS+ML +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 410 G-VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
+ PD T S+LSAC++ + G++ + + ++ M R G +
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 469 AFDMIKQ 475
A +I+Q
Sbjct: 333 ARRLIEQ 339
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/641 (36%), Positives = 368/641 (57%), Gaps = 38/641 (5%)
Query: 52 YTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSY 111
Y G + ARS+F+ + S WN ++ AY N E L+ +
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVS--WNALLSAYVQNSKMEEACMLFKSRE--------- 215
Query: 112 TFPFVLKACASNSLILEGKVVHG-DIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE 170
+ V C + + K+V + + D ++ YA+ G+ D+ ++FDE
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA-----VGQLG 225
V+D+ +WT M++ Y Q EEA LF K + +S + + +L
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 226 DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLT 285
DV+ + V + N+++ YA+CG + +A+ +FD M KRD +SW +M+
Sbjct: 336 DVMPCRNVSTW-------------NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 286 GYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI 345
GY Q+G + EAL LF +M+ + N + +S C + + +LG++ HG ++ +
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 346 DATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQ 405
+ NA++ MY KCG ++ A ++F ++ + +++ SWN +IAGY HG G AL FF
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEM--AGKDIVSWNTMIAGYSRHGFGEVALRFFES 500
Query: 406 MLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAG 464
M EG+KPD T ++LSACSH GL+D+GR+ F MT+ V P +HYACMVD+LGRAG
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Query: 465 CLYEAFDMIKQMPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSN 519
L +A +++K MP P+ ++WG LL A R+HG E AA+ +F +EPE++G +VL+SN
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 620
Query: 520 IYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVES 579
+YA+S +W +VGKLR M++KG+KK +S IE F D +P E++ +E
Sbjct: 621 LYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEE 680
Query: 580 MAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRV 639
+ + +K AGY+ S LHDVE+E++E M+ YHSE+LAVA+GIM ++ ++V KNLRV
Sbjct: 681 LDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRV 740
Query: 640 CNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
C DCH+A ++++ I R II+RD NRFHHF+ G+CSC DYW
Sbjct: 741 CEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 210/459 (45%), Gaps = 48/459 (10%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDI 136
WN I +Y G C E L ++ M R S +S N ++ + L ++ D+
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 137 IRTGFLSDSYVQ----------------------AALVDMYAKCGQTDDGCKVFDEMSVR 174
+ + YV+ ++ YA+ G DD VFD M +
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 175 DLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVH 234
+ VSW +++AY Q K EEA +LF+ + L+S + + G V K + V
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLG---------GFVKKKKIVE 237
Query: 235 GYAICNAF-LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
++ + D+ N+I+ YA+ G +++AR +FD +D+ +W +M++GYIQN
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMV 297
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EA LFD+M + N V+ +++ ++ ++ + N+ + N +
Sbjct: 298 EEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV----STWNTM 349
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+ YA+CG + A+N+F+ + +R+ SW +IAGY GH +AL F QM EG +
Sbjct: 350 ITGYAQCGKISEAKNLFDKM--PKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+ +F+S LS C+ ++ G++ + K + ++ M + G + EA D+
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 474 KQMPLPPNDSV-WGALLLACRIH--GEIAANYLFQLEPE 509
K+M D V W ++ H GE+A + ++ E
Sbjct: 468 KEM--AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 131/325 (40%), Gaps = 75/325 (23%)
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKF- 334
D+ WN ++ Y++ G+ +EAL +F M + + V+ ++S G +L RK
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 335 ---------------HGYIINSNM-----------KIDATLRNAVMDMYAKCGDLDTAEN 368
GY+ N N+ + D N ++ YA+ G +D A +
Sbjct: 119 DEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 369 MFNDIHPSERNVS------------------------------SWNVLIAGYGMHGHGRK 398
+F D P + +VS SWN L+ G+ +
Sbjct: 179 VF-DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVE 237
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
A +FF M V+ D +++ +I++ + +G IDE R+ F + S +V + MV
Sbjct: 238 ARQFFDSM---NVR-DVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVS 289
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI--AANYLFQLEP-EHTGYFV 515
+ + EA ++ +MP N+ W A +LA + GE A LF + P + +
Sbjct: 290 GYIQNRMVEEARELFDKMP-ERNEVSWNA-MLAGYVQGERMEMAKELFDVMPCRNVSTWN 347
Query: 516 LMSNIYAASNKWREVGKLREDMKNK 540
M YA K E L + M +
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKR 372
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/662 (36%), Positives = 383/662 (57%), Gaps = 12/662 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
++IH+S+ S + L++ +I YT G+ A + ++N + WN++I+ Y
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT--WNSLIKGY 361
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
N E LE +S M +G S+ + ++ A S +L G +H +I+ G+ S+
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
V L+DMY+KC T + F M +DL+SWT +I Y Q + EAL LF+ ++
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ D + + S+ A L +L + +H + + L D IQN +V +Y +C N+ A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYA 540
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF+ ++ +D++SW SM++ NG SEA+ LF M + + V L ++SA L
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+ GR+ H Y++ ++ ++ AV+DMYA CGDL +A+ +F+ I + + +
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE--RKGLLQYTS 658
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KL 444
+I YGMHG G+ A+E F +M E V PDHI+F ++L ACSHAGL+DEGR M +
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIA 499
++P +HY C+VDMLGRA C+ EAF+ +K M P VW ALL ACR H GEIA
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A L +LEP++ G VL+SN++A +W +V K+R MK G++K S IE +
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHK 838
Query: 560 FHTADRVNPYWKEVYKKVESMAVEI-KMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F D+ +P KE+Y+K+ + ++ + GY+ D LH+V++ ++ ML+ HSE++A+
Sbjct: 839 FTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAI 898
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
A+G++ A +++TKNLRVC DCH+ + +S ++RR I++RDANRFHHFE G CSC D
Sbjct: 899 AYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGD 958
Query: 679 YW 680
W
Sbjct: 959 SW 960
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 203/403 (50%), Gaps = 6/403 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
RQ+HS + + + L K++ Y G + A +F+ + D++ +F WNTMI AY
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM-PDRT-AFAWNTMIGAY 157
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+NG L LY MR G+ +FP +LKACA I G +H +++ G+ S
Sbjct: 158 VSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTG 217
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVR-DLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
++ ALV MYAK ++FD + D V W ++++Y + K E L LF++
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 277
Query: 205 EGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAI-CNAFLEDLCIQNSIVAMYARCGNVE 263
G +S TIVS +A + +H + + +L + N+++AMY RCG +
Sbjct: 278 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337
Query: 264 KARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACT 323
+A + M D+++WNS++ GY+QN EAL F +M + K + V+ +++A
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 397
Query: 324 YLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSW 383
L + G + H Y+I + + N ++DMY+KC F +H ++++ SW
Sbjct: 398 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH--DKDLISW 455
Query: 384 NVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+IAGY + +ALE F + ++ ++ D + SIL A S
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 176/335 (52%), Gaps = 10/335 (2%)
Query: 97 LYSTMRRSGISSNSY---TFPFVLKACASNSLILEGKVVHGDIIRT--GFLSDSYVQAAL 151
L +R +S N+ F +VL+ C + +G+ +H I +T F D ++ L
Sbjct: 64 LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKL 122
Query: 152 VDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDS 211
V MY KCG DD KVFDEM R +W MI AY +P AL L+ + EG+
Sbjct: 123 VFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGL 182
Query: 212 VTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFD- 270
+ ++ A +L D+ +H + + I N++V+MYA+ ++ AR +FD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 271 MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQL 330
EK D + WNS+L+ Y +G++ E L LF EM + PN T + ++AC +L
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 331 GRKFHGYIINSNM-KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G++ H ++ S+ + + NA++ MY +CG + AE + ++ + +V +WN LI G
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA--DVVTWNSLIKG 360
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
Y + ++ALEFFS M+ G K D ++ TSI++A
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 166/315 (52%), Gaps = 5/315 (1%)
Query: 20 NFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWN 79
N LA + ++H+ + G + L +G +I Y+ F +H+ S W
Sbjct: 401 NLLAGM-ELHAYVIKHGW-DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS--WT 456
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
T+I YA N VE LEL+ + + + + +L+A + +L K +H I+R
Sbjct: 457 TVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK 516
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILF 199
G L D+ +Q LVD+Y KC +VF+ + +D+VSWT MI++ EA+ LF
Sbjct: 517 GLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELF 575
Query: 200 QKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
++ + GL +DSV ++ + SA L + K + +H Y + F + I ++V MYA C
Sbjct: 576 RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACC 635
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G+++ A+ VFD +E++ L+ + SM+ Y +G A+ LFD+M++ + P+ ++ L L+
Sbjct: 636 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695
Query: 320 SACTYLGSRQLGRKF 334
AC++ G GR F
Sbjct: 696 YACSHAGLLDEGRGF 710
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/669 (36%), Positives = 381/669 (56%), Gaps = 19/669 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
LA +Q+H GL + L + +I Y + AR++F+++ S WN++
Sbjct: 331 LALGQQVHCMALKLGL-DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLIS--WNSV 387
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEG----KVVHGDII 137
I A NG VE + L+ + R G+ + YT VLKA +S + EG K VH I
Sbjct: 388 IAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAI 444
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
+ +SDS+V AL+D Y++ + +F+ + DLV+W M+ Y Q+ + L
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLK 503
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
LF ++G SD T+ +V G L + + + VH YAI + + DL + + I+ MY
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
+CG++ A+ FD + D ++W +M++G I+NG+ A +F +M+ P+ T
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
L A + L + + GR+ H + N D + +++DMYAKCG +D A +F I
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-- 681
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
N+++WN ++ G HG G++ L+ F QM G+KPD +TF +LSACSH+GL+ E K
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKH 741
Query: 438 FADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHG 496
M +KPE++HY+C+ D LGRAG + +A ++I+ M + + S++ LL ACR+ G
Sbjct: 742 MRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQG 801
Query: 497 EI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVI 551
+ A L +LEP + +VL+SN+YAA++KW E+ R MK +KK FS I
Sbjct: 802 DTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Query: 552 EYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNY 611
E I F DR N + +Y+KV+ M +IK GY+P+ L DVE+E++E L Y
Sbjct: 862 EVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYY 921
Query: 612 HSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG 671
HSEKLAVAFG+++ P ++V KNLRVC DCH+A ++I+ +Y R+I++RDANRFH F+
Sbjct: 922 HSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKD 981
Query: 672 GTCSCNDYW 680
G CSC DYW
Sbjct: 982 GICSCGDYW 990
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 206/420 (49%), Gaps = 5/420 (1%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N + Y ++G L+ ++ M S + + TF +L + G+ VH ++
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G V +L++MY K + VFD MS RDL+SW +I Q EA+ L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 199 FQKTQQEGLLSDSVTIVSVASAVGQLGDVLK-AQAVHGYAICNAFLEDLCIQNSIVAMYA 257
F + + GL D T+ SV A L + L ++ VH +AI + D + +++ Y+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALI 317
R +++A ++F+ DL++WN+M+ GY Q+ + L LF M + + T
Sbjct: 464 RNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 318 LVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE 377
+ C +L + G++ H Y I S +D + + ++DMY KCGD+ A+ F+ I P
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI-PVP 581
Query: 378 RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKC 437
+V +W +I+G +G +A FSQM GV PD T ++ A S +++GR+
Sbjct: 582 DDV-AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 438 FADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
A+ KL+ + +VDM + G + +A+ + K++ + N + W A+L+ HGE
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGE 699
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 41/384 (10%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCV-----ETLELYSTMR 102
+I Y+ G AR +F+ + + S WN+++ AYA + CV + L+ +R
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVS--WNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 103 RSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD 162
+ + ++ T +LK C + + + HG + G D +V ALV++Y K G+
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
+G +F+EM RD+V W +M+ AY + EEA+ L GL + +T+ +A G
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG 257
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
D A V +A N D ++I N
Sbjct: 258 DDSD---AGQVKSFANGN-----------------------------DASSVSEIIFRNK 285
Query: 283 MLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSN 342
L+ Y+ +GQ S L F +M SD + + VT +++++ + S LG++ H +
Sbjct: 286 GLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG 345
Query: 343 MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEF 402
+ + T+ N++++MY K A +F+++ SER++ SWN +IAG +G +A+
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNM--SERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 403 FSQMLEEGVKPDHITFTSILSACS 426
F Q+L G+KPD T TS+L A S
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 6/211 (2%)
Query: 113 FPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS 172
F F+ A S+ L+L GK H I+ + ++ L+ MY+KCG +VFD+M
Sbjct: 43 FGFLRNAITSSDLML-GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 173 VRDLVSWTVMITAYEQA-----EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
RDLVSW ++ AY Q+ E ++A +LF+ +Q+ + + +T+ + G V
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
+++ HGYA D + ++V +Y + G V++ +++F+ M RD++ WN ML Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
++ G EA+ L +S PN +T +L
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Query: 250 NSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA-----SEALLLFDEMQ 304
N++++MY++CG++ AR VFD M RDL+SWNS+L Y Q+ + +A LLF ++
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+ +T ++ C + G FHGY + D + A++++Y K G +
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITF 418
+ +F ++ R+V WN+++ Y G +A++ S G+ P+ IT
Sbjct: 198 EGKVLFEEM--PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
LG+ H I+ + L N ++ MY+KCG L A +F+ + +R++ SWN ++A
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM--PDRDLVSWNSILAA 114
Query: 390 YGMHGHG-----RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKL 444
Y ++A F + ++ V +T + +L C H+G + K+
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ + +V++ + G + E + ++MP
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/665 (36%), Positives = 377/665 (56%), Gaps = 17/665 (2%)
Query: 25 LRQIHSSLTTSGLINQALH---LGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTM 81
L+QIH SL IN LH +++K T + L S H FL+N++
Sbjct: 29 LKQIHVSL-----INHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFS-HTQFPNIFLYNSL 82
Query: 82 IRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGF 141
I + NN ETL+L+ ++R+ G+ + +TFP VLKAC S G +H +++ GF
Sbjct: 83 INGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGF 142
Query: 142 LSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK 201
D +L+ +Y+ G+ +D K+FDE+ R +V+WT + + Y + + EA+ LF+K
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 202 TQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGN 261
+ G+ DS IV V SA +GD+ + + Y ++ ++ ++V +YA+CG
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 262 VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSA 321
+EKAR VFD M ++D+++W++M+ GY N E + LF +M + KP+ + + +S+
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 322 CTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
C LG+ LG I + + NA++DMYAKCG + +F ++ E+++
Sbjct: 323 CASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM--KEKDIV 380
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
N I+G +GH + + F Q + G+ PD TF +L C HAGLI +G + F +
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 442 TKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRI-----H 495
+ + ++K V+HY CMVD+ GRAG L +A+ +I MP+ PN VWGALL CR+
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 496 GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGK 555
E L LEP + G +V +SNIY+ +W E ++R+ M KG+KK +S IE
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 556 DIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEK 615
+ F D+ +P ++Y K+E + E+++ G++P DVE+E++E +L YHSEK
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEK 620
Query: 616 LAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCS 675
LAVA G+++ V++V KNLRVC DCH + IS I RR+I+VRD NRFH F G+CS
Sbjct: 621 LAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCS 680
Query: 676 CNDYW 680
CNDYW
Sbjct: 681 CNDYW 685
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/672 (37%), Positives = 395/672 (58%), Gaps = 26/672 (3%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R++H + T+GL++ + +G ++ Y G AR +F + + S S WN+MI
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS--WNSMITGL 390
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
NG +E +E Y +MRR I S+T L +CAS G+ +HG+ ++ G +
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKP-EEALILFQKTQQ 204
V AL+ +YA+ G ++ K+F M D VSW +I A ++E+ EA++ F Q+
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 205 EGLLSDSVTIVSVASA-----VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
G + +T SV SA G+LG + +HG A+ N ++ +N+++A Y +C
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGELG-----KQIHGLALKNNIADEATTENALIACYGKC 565
Query: 260 GNVEKARLVFD-MMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
G ++ +F M E+RD ++WNSM++GYI N ++AL L M + + + +
Sbjct: 566 GEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+SA + + + G + H + + ++ D + +A++DMY+KCG LD A FN + R
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTM--PVR 683
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPDHITFTSILSACSHAGLIDEGRKC 437
N SWN +I+GY HG G +AL+ F M +G PDH+TF +LSACSHAGL++EG K
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 438 FADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC-RIH 495
F M+ + P ++H++CM D+LGRAG L + D I++MP+ PN +W +L AC R +
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 496 G------EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFS 549
G + AA LFQLEPE+ +VL+ N+YAA +W ++ K R+ MK+ +KK A +S
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Query: 550 VIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
+ + F D+ +P +YKK++ + +++ AGY+P AL+D+E E++E +L
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 923
Query: 610 NYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
+YHSEKLAVAF + + +++ KNLRVC DCHSAF++IS I R+II+RD+NRFHH
Sbjct: 924 SYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHH 983
Query: 669 FEGGTCSCNDYW 680
F+ G CSC+D+W
Sbjct: 984 FQDGACSCSDFW 995
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 229/480 (47%), Gaps = 24/480 (5%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R HS L + L ++ ++L +I Y G+ +AR +F+ + S W ++ Y
Sbjct: 21 RFFHSRLYKNRL-DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVS--WACIVSGY 77
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA--SNSLILEGKVVHGDIIRTGFLS 143
+ NG E L M + GI SN Y F VL+AC + IL G+ +HG + + +
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 144 DSYVQAALVDMYAKC-GQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
D+ V L+ MY KC G F ++ V++ VSW +I+ Y QA A +F
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 203 QQEGLLSDSVTIVSVASAVGQLG--DVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
Q +G T S+ + L DV + + + L DL + + +V+ +A+ G
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVS 320
++ AR VF+ ME R+ ++ N ++ G ++ EA LF +M NS +P + +IL+S
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLS 316
Query: 321 A------CTYLGSRQLGRKFHGYIINSNMKID--ATLRNAVMDMYAKCGDLDTAENMFND 372
+ +G ++ GR+ HG++I + + +D + N +++MYAKCG + A +F
Sbjct: 317 SFPEYSLAEEVGLKK-GREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGSIADARRVF-- 372
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
++++ SWN +I G +G +A+E + M + P T S LS+C+
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 433 EGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLA 491
G++ + KL + V ++ + G L E + M P +D V W +++ A
Sbjct: 433 LGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM--PEHDQVSWNSIIGA 490
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 197/421 (46%), Gaps = 24/421 (5%)
Query: 130 KVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQA 189
+ H + + D Y+ L++ Y + G + KVFDEM +R+ VSW +++ Y +
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 190 EKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV--LKAQAVHGYAICNAFLEDLC 247
+ +EAL+ + +EG+ S+ VSV A ++G V L + +HG ++ D
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 248 IQNSIVAMYARC-GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ N +++MY +C G+V A F +E ++ +SWNS+++ Y Q G A +F MQ
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 307 DCKPNPVT-ALILVSACTYLGSR-QLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLD 364
+P T ++ +AC+ +L + I S + D + + ++ +AK G L
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEE-GVKPDHITFTSILS 423
A +FN + RN + N L+ G G +A + F M V P+ ++ +LS
Sbjct: 261 YARKVFNQMET--RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLS 316
Query: 424 ACSHAGLIDE-----GRKCFAD-MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+ L +E GR+ +T V V +V+M + G + +A + M
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM- 375
Query: 478 LPPNDSV-WGALLLACRIHG-EIAANYLFQLEPEH---TGYFVLMSNIYA-ASNKWREVG 531
DSV W +++ +G I A ++ H G F L+S++ + AS KW ++G
Sbjct: 376 -TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 532 K 532
+
Sbjct: 435 Q 435
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 9/223 (4%)
Query: 208 LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARL 267
+++ V + V S VG G A+ H N +D+ + N+++ Y G+ AR
Sbjct: 1 MTNCVPLSFVQSCVGHRG---AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARK 57
Query: 268 VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGS 327
VFD M R+ +SW +++GY +NG+ EAL+ +M N + ++ AC +GS
Sbjct: 58 VFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGS 117
Query: 328 RQL--GRKFHGYIINSNMKIDATLRNAVMDMYAKC-GDLDTAENMFNDIHPSERNVSSWN 384
+ GR+ HG + + +DA + N ++ MY KC G + A F DI +N SWN
Sbjct: 118 VGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEV--KNSVSWN 175
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSIL-SACS 426
+I+ Y G R A FS M +G +P TF S++ +ACS
Sbjct: 176 SIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 350/582 (60%), Gaps = 7/582 (1%)
Query: 104 SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
S I ++ + +LK C L+++G++VH I+++ F D + L++MYAKCG ++
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEE 113
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
KVF++M RD V+WT +I+ Y Q ++P +AL+ F + + G + T+ SV A
Sbjct: 114 ARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSM 283
+HG+ + F ++ + ++++ +Y R G ++ A+LVFD +E R+ +SWN++
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
+ G+ + +AL LF M +P+ + L AC+ G + G+ H Y+I S
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
K+ A N ++DMYAK G + A +F+ + ++R+V SWN L+ Y HG G++A+ +F
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRL--AKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 404 SQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRA 463
+M G++P+ I+F S+L+ACSH+GL+DEG + M K + PE HY +VD+LGRA
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 464 GCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMS 518
G L A I++MP+ P ++W ALL ACR+H G AA ++F+L+P+ G V++
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILY 471
Query: 519 NIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVE 578
NIYA+ +W + ++R+ MK G+KK A S +E I F D +P +E+ +K E
Sbjct: 472 NIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWE 531
Query: 579 SMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLR 638
+ +IK GY+PD S + V+ ++RE L YHSEK+A+AF ++N P + + + KN+R
Sbjct: 532 EVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIR 591
Query: 639 VCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
VC DCH+A + S + R+IIVRD NRFHHF+ G CSC DYW
Sbjct: 592 VCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 218/450 (48%), Gaps = 14/450 (3%)
Query: 6 PSTEGFYDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P+ FY+ LLK C L R +H+ + S + + +G ++ Y G AR
Sbjct: 57 PADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS-IFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 63 SLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACAS 122
+F + + W T+I Y+ + + L ++ M R G S N +T V+KA A+
Sbjct: 116 KVFEKMPQRDFVT--WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA 173
Query: 123 NSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVM 182
G +HG ++ GF S+ +V +AL+D+Y + G DD VFD + R+ VSW +
Sbjct: 174 ERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNAL 233
Query: 183 ITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
I + + E+AL LFQ ++G + S+ A G + + + VH Y I +
Sbjct: 234 IAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGE 293
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
N+++ MYA+ G++ AR +FD + KRD++SWNS+LT Y Q+G EA+ F+E
Sbjct: 294 KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEE 353
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD 362
M+ +PN ++ L +++AC++ G G ++ + + +A V+D+ + GD
Sbjct: 354 MRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 363 LDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITFT 419
L+ A ++ P E + W L+ MH + G A E ++ + P H+
Sbjct: 414 LNRALRFIEEM-PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP-HVILY 471
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPE 449
+I ++ G ++ + M + VK E
Sbjct: 472 NIYAS---GGRWNDAARVRKKMKESGVKKE 498
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/663 (34%), Positives = 378/663 (57%), Gaps = 18/663 (2%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
Q+H+ + +GL ++ + + +I Y G AR LF+ + WN+MI YA
Sbjct: 215 QVHTVVVKNGL-DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT--WNSMISGYA 271
Query: 87 NNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSY 146
NG +E L ++ +MR + + + +F V+K CA+ + + +H +++ GFL D
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 147 VQAALVDMYAKCGQTDDGCKVFDEMS-VRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
++ AL+ Y+KC D ++F E+ V ++VSWT MI+ + Q + EEA+ LF + +++
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ + T + +A+ V+ VH + + + +++ Y + G VE+A
Sbjct: 392 GVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
VF ++ +D+++W++ML GY Q G+ A+ +F E+ KPN T +++ C
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 326 -GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWN 384
S G++FHG+ I S + + +A++ MYAK G++++AE +F E+++ SWN
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK--RQREKDLVSWN 565
Query: 385 VLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK- 443
+I+GY HG KAL+ F +M + VK D +TF + +AC+HAGL++EG K F M +
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 444 LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEI 498
+ P +H +CMVD+ RAG L +A +I+ MP P ++W +L ACR+H G +
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRL 685
Query: 499 AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQ 558
AA + ++PE + +VL+SN+YA S W+E K+R+ M + +KK +S IE
Sbjct: 686 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 745
Query: 559 GFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAV 618
F DR +P ++Y K+E ++ +K GY PD S L D++DE +E +L HSE+LA+
Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAI 805
Query: 619 AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEG-GTCSCN 677
AFG++ + + + KNLRVC DCH + I+ I R+I+VRD+NRFHHF G CSC
Sbjct: 806 AFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCG 865
Query: 678 DYW 680
D+W
Sbjct: 866 DFW 868
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 191/364 (52%), Gaps = 3/364 (0%)
Query: 61 ARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKAC 120
A +LF+ S++ +++ ++ +G E L+ + R G+ + F VLK
Sbjct: 46 AHNLFDKSPGRDRESYI--SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
A+ L G+ +H I+ GFL D V +LVD Y K DG KVFDEM R++V+WT
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+I+ Y + +E L LF + Q EG +S T + + + G + VH + N
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
+ + + NS++ +Y +CGNV KAR++FD E + +++WNSM++GY NG EAL +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
M+ + + + + ++ C L + + H ++ D +R A+M Y+KC
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
+ A +F +I NV SW +I+G+ + +A++ FS+M +GV+P+ T++
Sbjct: 344 TAMLDALRLFKEI-GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 421 ILSA 424
IL+A
Sbjct: 403 ILTA 406
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 140/315 (44%), Gaps = 24/315 (7%)
Query: 250 NSIVAMYARC-GNVEKARL-----VFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM 303
N + + C G V +RL +FD RD S+ S+L G+ ++G+ EA LF +
Sbjct: 25 NGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84
Query: 304 QN----SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAK 359
DC + ++++ VSA L GR+ H I D ++ +++D Y K
Sbjct: 85 HRLGMEMDC--SIFSSVLKVSAT--LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK 140
Query: 360 CGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFT 419
+ +F+++ ERNV +W LI+GY + + L F +M EG +P+ TF
Sbjct: 141 GSNFKDGRKVFDEMK--ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFA 198
Query: 420 SILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLP 479
+ L + G+ G + + K + + ++++ + G + +A + + +
Sbjct: 199 AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV- 257
Query: 480 PNDSVWGALLLACRIHGEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKN 539
+ W +++ AAN L LE Y + ++ + + + + V KL ++K
Sbjct: 258 KSVVTWNSMISG------YAANGL-DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 540 KGLKKPAAFSVIEYG 554
+ SV++YG
Sbjct: 311 LRFTEQLHCSVVKYG 325
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/614 (36%), Positives = 370/614 (60%), Gaps = 22/614 (3%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
WN +R A E++ LY +M RSG S ++++FPF+LK+CAS SL + G+ +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDE--MSVRDLVSWTVMITAYEQAEKPEEA 195
+ G ++ +V AL+ MY KCG D KVF+E S + V + +I+ Y K +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 196 LILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAM 255
+F++ ++ G+ DSVT++ + + +++HG + ++ + NS + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 256 YARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTA 315
Y +CG+VE R +FD M + LI+WN++++GY QNG A + L L+++M++S P+P T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKI-DATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+ ++S+C +LG++++G + G ++ SN + + + NA + MYA+CG+L A +F DI
Sbjct: 261 VSVLSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF-DIM 318
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
P +++ SW +I YGMHG G L F M++ G++PD F +LSACSH+GL D+G
Sbjct: 319 PV-KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 435 RKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
+ F M + ++P +HY+C+VD+LGRAG L EA + I+ MP+ P+ +VWGALL AC+
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 494 IH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
IH E+A + + EP + GY+VLMSNIY+ S + ++R M+ + +K +
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEI-KMAGYMPDLSCAL-HDVEDEDRE 606
S +E+ + F DR + +EV++ ++ + + ++AG ++ C +V RE
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAG---NMDCDRGEEVSSTTRE 554
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
H SE+LA+AFGI+N P + V KNLRVC DCH + +S I R+ +VRDA+RF
Sbjct: 555 H-----SERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 667 HHFEGGTCSCNDYW 680
H+F+ G CSC DYW
Sbjct: 610 HYFKDGVCSCKDYW 623
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 213/428 (49%), Gaps = 9/428 (2%)
Query: 1 MRRLGPSTEGF-YDQLLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIKYTTYG 56
M R G S + F + +LKSC L+ S +Q+H +T G + L A +I Y G
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTA-LISMYCKCG 102
Query: 57 EPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFV 116
AR +F S +N +I Y N + ++ M+ +G+S +S T +
Sbjct: 103 LVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGL 162
Query: 117 LKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
+ C + G+ +HG ++ G S+ V + + MY KCG + G ++FDEM V+ L
Sbjct: 163 VPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL 222
Query: 177 VSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGY 236
++W +I+ Y Q + L L+++ + G+ D T+VSV S+ LG V
Sbjct: 223 ITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKL 282
Query: 237 AICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEA 296
N F+ ++ + N+ ++MYARCGN+ KAR VFD+M + L+SW +M+ Y +G
Sbjct: 283 VESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIG 342
Query: 297 LLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMD 355
L+LFD+M +P+ ++++SAC++ G G + F ++ + ++D
Sbjct: 343 LMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVD 402
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
+ + G LD A F + P E + + W L+ +H + A F++++E +P++
Sbjct: 403 LLGRAGRLDEAME-FIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNN 459
Query: 416 ITFTSILS 423
I + ++S
Sbjct: 460 IGYYVLMS 467
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/591 (37%), Positives = 343/591 (58%), Gaps = 8/591 (1%)
Query: 96 ELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
E S R S SN +L+ CA N ++E K HG IIR D + L++ Y
Sbjct: 47 EEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAY 106
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
+KCG + +VFD M R LVSW MI Y + EAL +F + + EG TI
Sbjct: 107 SKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTIS 166
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
SV SA G D L+ + +H ++ +L + +++ +YA+CG ++ A VF+ M+ +
Sbjct: 167 SVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
++W+SM+ GY+QN EALLL+ Q + N T ++ AC+ L + G++ H
Sbjct: 227 SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMH 286
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
I S + + ++ +DMYAKCG L + +F+++ E+N+ WN +I+G+ H
Sbjct: 287 AVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ--EKNLELWNTIISGFAKHAR 344
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
++ + F +M ++G+ P+ +TF+S+LS C H GL++EGR+ F M T + P V HY+
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 455 CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPE 509
CMVD+LGRAG L EA+++IK +P P S+WG+LL +CR++ E+AA LF+LEPE
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPE 464
Query: 510 HTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPY 569
+ G VL+SNIYAA+ +W E+ K R+ +++ +KK S I+ + F + +P
Sbjct: 465 NAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPR 524
Query: 570 WKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEA 629
+E+ ++++ ++ + GY P + LHDVE +E +L HSEKLA+ FG+M L +
Sbjct: 525 IREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESS 584
Query: 630 VVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
V++ KNLR+C DCH + S RR IIVRD NRFHHF G CSC D+W
Sbjct: 585 PVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 204/398 (51%), Gaps = 10/398 (2%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I Y+ G AR +F+ + S WNTMI Y N E L+++ MR G
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVS--WNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 108 SNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKV 167
+ +T VL AC N LE K +H ++T + YV AL+D+YAKCG D +V
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 168 FDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDV 227
F+ M + V+W+ M+ Y Q + EEAL+L+++ Q+ L + T+ SV A L +
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 279
Query: 228 LKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGY 287
++ + +H + F ++ + +S V MYA+CG++ ++ ++F +++++L WN++++G+
Sbjct: 280 IEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGF 339
Query: 288 IQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS-NMKID 346
++ + E ++LF++MQ PN VT L+S C + G + GR+F + + + +
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 399
Query: 347 ATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQM 406
+ ++D+ + G L A + I P + S W L+A ++ + A ++
Sbjct: 400 VVHYSCMVDILGRAGLLSEAYELIKSI-PFDPTASIWGSLLASCRVYKNLELAEVAAEKL 458
Query: 407 LEEGVKPD----HITFTSILSACSHAGLIDEGRKCFAD 440
E ++P+ H+ ++I +A I + RK D
Sbjct: 459 FE--LEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 494
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/672 (34%), Positives = 377/672 (56%), Gaps = 15/672 (2%)
Query: 15 LLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHND 71
+L++C + L +++H + G + + +I Y G+ +AR LF+ +
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 72 KSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKV 131
S WN MI Y NG C E LEL+ MR + + T V+ AC G+
Sbjct: 261 DIIS--WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H +I TGF D V +L MY G + K+F M +D+VSWT MI+ YE
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
P++A+ ++ Q+ + D +T+ +V SA LGD+ +H AI + + + N+
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN 438
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++ MY++C ++KA +F + ++++ISW S++ G N + EAL+ +M+ + +PN
Sbjct: 439 LINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPN 497
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
+T ++AC +G+ G++ H +++ + + +D L NA++DMY +CG ++TA + FN
Sbjct: 498 AITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN 557
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+++V+SWN+L+ GY G G +E F +M++ V+PD ITF S+L CS + ++
Sbjct: 558 S---QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMV 614
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G F+ M V P +KHYAC+VD+LGRAG L EA I++MP+ P+ +VWGALL A
Sbjct: 615 RQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNA 674
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIH GE++A ++F+L+ + GY++L+ N+YA KWREV K+R MK GL A
Sbjct: 675 CRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDA 734
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S +E + F + D+ +P KE+ +E ++ G + D + R+
Sbjct: 735 GCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRD 794
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
+ HSE+ A+AFG++N P + VTKNL +C +CH +FIS RR+I VRDA F
Sbjct: 795 EIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHF 854
Query: 667 HHFEGGTCSCND 678
HHF+ G CSC D
Sbjct: 855 HHFKDGECSCGD 866
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 222/441 (50%), Gaps = 6/441 (1%)
Query: 31 SLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGH 90
S+ S + + + LG + + +G A +F + +S WN ++ YA G+
Sbjct: 118 SIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFS--WNVLVGGYAKQGY 175
Query: 91 CVETLELYSTMRR-SGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQA 149
E + LY M G+ + YTFP VL+ C + GK VH ++R G+ D V
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
Query: 150 ALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLS 209
AL+ MY KCG +FD M RD++SW MI+ Y + E L LF + +
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 210 DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVF 269
D +T+ SV SA LGD + +H Y I F D+ + NS+ MY G+ +A +F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 270 DMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQ 329
ME++D++SW +M++GY N +A+ + M KP+ +T ++SAC LG
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 330 LGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
G + H I + + + N +++MY+KC +D A ++F++I +NV SW +IAG
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI--PRKNVISWTSIIAG 473
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPE 449
++ +AL F QM + ++P+ IT T+ L+AC+ G + G++ A + + V +
Sbjct: 474 LRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 450 VKHYACMVDMLGRAGCLYEAF 470
++DM R G + A+
Sbjct: 533 DFLPNALLDMYVRCGRMNTAW 553
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 284 LTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNM 343
L G NG+ EA+ L + MQ + + LV C + +++ G K + ++S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 344 KIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFF 403
+ L NA + M+ + G+L A +F + SERN+ SWNVL+ GY G+ +A+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKM--SERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 404 SQML-EEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGR 462
+ML GVKPD TF +L C + G++ + + + ++ ++ M +
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 463 AGCLYEAFDMIKQMP 477
G + A + +MP
Sbjct: 244 CGDVKSARLLFDRMP 258
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/663 (34%), Positives = 372/663 (56%), Gaps = 12/663 (1%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R +H+ + + L +I Y+ P +AR + S W ++I
Sbjct: 26 RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVS--WTSLISGL 83
Query: 86 ANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
A NGH L + MRR G+ N +TFP KA AS L + GK +H ++ G + D
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+V + DMY K DD K+FDE+ R+L +W I+ +P EA+ F + ++
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+S+T + +A + +HG + + F D+ + N ++ Y +C + +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
++F M ++ +SW S++ Y+QN + +A +L+ + + + ++SAC +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
+LGR H + + + ++ + +A++DMY KCG ++ +E F+++ E+N+ + N
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM--PEKNLVTRNS 381
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGV--KPDHITFTSILSACSHAGLIDEGRKCFADM-T 442
LI GY G AL F +M G P+++TF S+LSACS AG ++ G K F M +
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE----- 497
++P +HY+C+VDMLGRAG + A++ IK+MP+ P SVWGAL ACR+HG+
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Query: 498 IAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDI 557
+AA LF+L+P+ +G VL+SN +AA+ +W E +RE++K G+KK A +S I +
Sbjct: 502 LAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQV 561
Query: 558 QGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLA 617
F DR + KE+ + + E++ AGY PDL +L+D+E+E++ +++HSEKLA
Sbjct: 562 HAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLA 621
Query: 618 VAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCN 677
+AFG+++L +++TKNLR+C DCHS F+F+S +R+IIVRD NRFH F+ G CSC
Sbjct: 622 LAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCK 681
Query: 678 DYW 680
DYW
Sbjct: 682 DYW 684
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 179/364 (49%), Gaps = 3/364 (0%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRT-GFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSV 173
+LK S S + G+VVH I++T ++ L++MY+K + V
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 174 RDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAV 233
R++VSWT +I+ Q AL+ F + ++EG++ + T AV L + + +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 234 HGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQA 293
H A+ + D+ + S MY + + AR +FD + +R+L +WN+ ++ + +G+
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 294 SEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EA+ F E + D PN +T ++AC+ LG + HG ++ S D ++ N +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+D Y KC + ++E +F ++ +N SW L+A Y + KA + + ++ V+
Sbjct: 251 IDFYGKCKQIRSSEIIFTEM--GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMI 473
+S+LSAC+ ++ GR A K V+ + + +VDM G+ GC+ ++
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 474 KQMP 477
+MP
Sbjct: 369 DEMP 372
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/693 (34%), Positives = 383/693 (55%), Gaps = 44/693 (6%)
Query: 27 QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYA 86
QIH + G + L + ++ Y GE ++AR +F+ + S W +MI YA
Sbjct: 155 QIHGLIVKMGYA-KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS--WTSMICGYA 211
Query: 87 NNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDS 145
+ ++L+ M R ++ NS T V+ ACA + G+ V+ I +G +
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 146 YVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQE 205
+ +ALVDMY KC D ++FDE +L M + Y + EAL +F
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 206 GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
G+ D ++++S S+ QL ++L ++ HGY + N F I N+++ MY +C + A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQA-------------------------------S 294
+FD M + +++WNS++ GY++NG+
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 295 EALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAV 353
EA+ +F MQ+ + + VT + + SAC +LG+ L + + YI + +++D L +
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 354 MDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKP 413
+DM+++CGD ++A ++FN + + R+VS+W I M G+ +A+E F M+E+G+KP
Sbjct: 512 VDMFSRCGDPESAMSIFNSL--TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKP 569
Query: 414 DHITFTSILSACSHAGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDM 472
D + F L+ACSH GL+ +G++ F M KL V PE HY CMVD+LGRAG L EA +
Sbjct: 570 DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQL 629
Query: 473 IKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKW 527
I+ MP+ PND +W +LL ACR+ G + AA + L PE TG +VL+SN+YA++ +W
Sbjct: 630 IEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRW 689
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
++ K+R MK KGL+KP S I+ F + D +P + ++ ++
Sbjct: 690 NDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL 749
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
G++PDLS L DV+++++ ML+ HSEKLA+A+G+++ +++ KNLRVC+DCHS
Sbjct: 750 GHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFA 809
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+F S +Y R+II+RD NRFH+ G CSC D+W
Sbjct: 810 KFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 257/486 (52%), Gaps = 42/486 (8%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
LK+C + L+ H SLT GL N + K++ + G + N +SY
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTI-TKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 76 --FLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
F++N++IR YA++G C E + L+ M SGIS + YTFPF L ACA + G +H
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G I++ G+ D +VQ +LV YA+CG+ D KVFDEMS R++VSWT MI Y + + +
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 194 EAL-ILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE--DLCIQN 250
+A+ + F+ + E + +SVT+V V SA +L D+ + V+ + I N+ +E DL + +
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMV-S 275
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKP 310
++V MY +C ++ A+ +FD +L N+M + Y++ G EAL +F+ M +S +P
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 311 NPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMF 370
+ ++ L +S+C+ L + G+ HGY++ + + + NA++DMY KC DTA +F
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 371 NDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE---------------------- 408
+ + S + V +WN ++AGY +G A E F M E
Sbjct: 396 DRM--SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 409 ----------EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVD 458
EGV D +T SI SAC H G +D + + + K ++ +V+ +VD
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVD 513
Query: 459 MLGRAG 464
M R G
Sbjct: 514 MFSRCG 519
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
Query: 383 WNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMT 442
+N LI GY G +A+ F +M+ G+ PD TF LSAC+ + G + +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 443 KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL--LACRIHGEIAA 500
K+ ++ +V G L A + +M N W +++ A R + A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICGYARRDFAKDAV 220
Query: 501 NYLFQL--EPEHTGYFVLMSNIYAASNKWR--EVG-KLREDMKNKGLK 543
+ F++ + E T V M + +A K E G K+ ++N G++
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/681 (34%), Positives = 379/681 (55%), Gaps = 17/681 (2%)
Query: 12 YDQLLKSCNFLA---SLRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNS 67
+ LL CN ++ Q+H+ G + +++K Y + A LF
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I S +F NT+I Y +G E++ L+ MR+SG + +TF VLKA
Sbjct: 210 IPEKDSVTF--NTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA 267
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +H + TGF D+ V ++D Y+K + + +FDEM D VS+ V+I++Y
Sbjct: 268 LGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
QA++ E +L F++ Q G + ++ S L + + +H A+ L
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ NS+V MYA+C E+A L+F + +R +SW ++++GY+Q G L LF +M+ S+
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 308 CKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAE 367
+ + T ++ A S LG++ H +II S + + ++DMYAKCG + A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 368 NMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSH 427
+F ++ +RN SWN LI+ + +G G A+ F++M+E G++PD ++ +L+ACSH
Sbjct: 508 QVFEEM--PDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 428 AGLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
G +++G + F M+ + + P+ KHYACM+D+LGR G EA ++ +MP P++ +W
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 487 ALLLACRIH-----GEIAANYLFQLEP-EHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
++L ACRIH E AA LF +E +V MSNIYAA+ +W +V +++ M+ +
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK A+S +E I F + D+ +P E+ +K+ + EI+ GY PD S + DV
Sbjct: 686 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDV 745
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAV-VQVTKNLRVCNDCHSAFRFISYIYRRKII 659
+++ + L YHSE+LAVAF +++ TPE + V KNLR C DCH+A + IS I +R+I
Sbjct: 746 DEQMKIESLKYHSERLAVAFALIS-TPEGCPIVVMKNLRACRDCHAAIKLISKIVKREIT 804
Query: 660 VRDANRFHHFEGGTCSCNDYW 680
VRD +RFHHF G CSC DYW
Sbjct: 805 VRDTSRFHHFSEGVCSCGDYW 825
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 226/461 (49%), Gaps = 23/461 (4%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+I + G+ ++AR LF+++ + + W ++ YA N H E +L+ M RS
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVT--WTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 108 S--NSYTFPFVLKACASNSLILEGKV--VHGDIIRTGFLSDSY--VQAALVDMYAKCGQT 161
+ + TF +L C N + + V VH ++ GF ++ + V L+ Y + +
Sbjct: 143 TLPDHVTFTTLLPGC--NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 162 DDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAV 221
D C +F+E+ +D V++ +IT YE+ E++ LF K +Q G T V AV
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
L D Q +H ++ F D + N I+ Y++ V + R++FD M + D +S+N
Sbjct: 261 VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 282 SMLTGYIQNGQASEALLLFDEMQ--NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYII 339
+++ Y Q Q +L F EMQ D + P ++ ++A L S Q+GR+ H +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAA--NLSSLQMGRQLHCQAL 378
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY---GMHGHG 396
+ + N+++DMYAKC + AE +F + +R SW LI+GY G+HG G
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSL--PQRTTVSWTALISGYVQKGLHGAG 436
Query: 397 RKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACM 456
L+ F++M ++ D TF ++L A + + G++ A + + V + +
Sbjct: 437 ---LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL 493
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
VDM + G + +A + ++MP N W AL+ A +G+
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGD 533
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 182/404 (45%), Gaps = 40/404 (9%)
Query: 122 SNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM---------- 171
S + L+ + V II+TGF +D+ +V+ + GQ KV+DEM
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNT 84
Query: 172 ------------SVRDL---------VSWTVMITAYEQAEKPEEALILFQKTQQEG--LL 208
S RDL V+WT+++ Y + +EA LF++ + L
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 209 SDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED--LCIQNSIVAMYARCGNVEKAR 266
D VT ++ VH +A+ F + L + N ++ Y ++ A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 267 LVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLG 326
++F+ + ++D +++N+++TGY ++G +E++ LF +M+ S +P+ T ++ A L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVL 386
LG++ H + + DA++ N ++D Y+K + +F+++ E + S+NV+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM--PELDFVSYNVV 322
Query: 387 IAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSV 446
I+ Y +L FF +M G + F ++LS ++ + GR+ L+
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LAT 381
Query: 447 KPEVKHYA-CMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALL 489
+ H +VDM + EA + K +P S W AL+
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALI 424
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/672 (34%), Positives = 370/672 (55%), Gaps = 45/672 (6%)
Query: 48 IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS 107
+++ Y+ G + S F + + + WN +I Y+ +G ++ Y+TM R S
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVT--WNVLIEGYSLSGLVGAAVKAYNTMMRD-FS 134
Query: 108 SN--SYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAK-------- 157
+N T +LK +SN + GK +HG +I+ GF S V + L+ MYA
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194
Query: 158 -----------------------CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEE 194
CG +D ++F M +D VSW MI Q +E
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKE 253
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
A+ F++ + +GL D SV A G LG + + + +H I F + + + ++++
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVT 314
MY +C + A+ VFD M++++++SW +M+ GY Q G+A EA+ +F +MQ S P+ T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 315 ALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIH 374
+SAC + S + G +FHG I S + T+ N+++ +Y KCGD+D + +FN+++
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEG 434
R+ SW +++ Y G + ++ F +M++ G+KPD +T T ++SACS AGL+++G
Sbjct: 434 V--RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 435 RKCFADMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACR 493
++ F MT + + P + HY+CM+D+ R+G L EA I MP PP+ W LL ACR
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Query: 494 IHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAF 548
G + AA L +L+P H + L+S+IYA+ KW V +LR M+ K +KK
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611
Query: 549 SVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHM 608
S I++ + F D +PY ++Y K+E + +I GY PD S HDVE+ + M
Sbjct: 612 SWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKM 671
Query: 609 LNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHH 668
LNYHSE+LA+AFG++ + ++V KNLRVC DCH+A + IS + R+I+VRDA RFH
Sbjct: 672 LNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHR 731
Query: 669 FEGGTCSCNDYW 680
F+ GTCSC D+W
Sbjct: 732 FKDGTCSCGDFW 743
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 133/324 (41%), Gaps = 67/324 (20%)
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQN 290
+ +HG I + + N+IV YA + AR VFD + + +L SWN++L Y +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 291 GQASEALLLFDEMQNSD--------------------------------CKPNPVTALIL 318
G SE F+++ + D VT + +
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPS-- 376
+ + G LG++ HG +I + + + ++ MYA G + A+ +F +
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 377 --------------------------ERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG 410
E++ SW +I G +G ++A+E F +M +G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 411 VKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEA- 469
+K D F S+L AC G I+EG++ A + + + + + + ++DM + CL+ A
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 470 --FDMIKQMPLPPNDSVWGALLLA 491
FD +KQ N W A+++
Sbjct: 326 TVFDRMKQ----KNVVSWTAMVVG 345
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/618 (37%), Positives = 350/618 (56%), Gaps = 19/618 (3%)
Query: 78 WNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
W MI G E + + M SG S+ +T V ACA + GK +H I
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 138 RTGFLSDSYVQAALVDMYAKC---GQTDDGCKVFDEMSVRDLVSWTVMITAY-EQAEKPE 193
R+G + D V+ +LVDMYAKC G DD KVFD M ++SWT +IT Y +
Sbjct: 297 RSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 194 EALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSI 252
EA+ LF + +G + + T S A G L D + V G A + + NS+
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
++M+ + +E A+ F+ + +++L+S+N+ L G +N +A L E+ + +
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
T L+S +GS + G + H ++ + + + NA++ MY+KCG +DTA +FN
Sbjct: 475 FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNF 534
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ RNV SW +I G+ HG + LE F+QM+EEGVKP+ +T+ +ILSACSH GL+
Sbjct: 535 ME--NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG + F M + +KP+++HYACMVD+L RAG L +AF+ I MP + VW L A
Sbjct: 593 EGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CR+H G++AA + +L+P ++ +SNIYA + KW E ++R MK + L K
Sbjct: 653 CRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEG 712
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
S IE G I F+ D +P ++Y +++ + EIK GY+PD LH +E+E+ E
Sbjct: 713 GCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDE 772
Query: 607 ----HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRD 662
+L HSEK+AVAFG+++ + V+V KNLRVC DCH+A ++IS + R+I++RD
Sbjct: 773 AEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRD 832
Query: 663 ANRFHHFEGGTCSCNDYW 680
NRFHHF+ G CSCNDYW
Sbjct: 833 LNRFHHFKDGKCSCNDYW 850
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 151/556 (27%), Positives = 271/556 (48%), Gaps = 27/556 (4%)
Query: 6 PSTEGFYDQLLKSCNFLASLRQ---IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTAR 62
P + LLKSC R +H+ L + ++ L +I Y+ G+ A
Sbjct: 59 PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV-LYNSLISLYSKSGDSAKAE 117
Query: 63 SLFNSIHN-DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACA 121
+F ++ K W+ M+ Y NNG ++ ++++ G+ N Y + V++AC+
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 122 SNSLILEGKVVHGDIIRTG-FLSDSYVQAALVDMYAKCGQT-DDGCKVFDEMSVRDLVSW 179
++ + G+V G +++TG F SD V +L+DM+ K + ++ KVFD+MS ++V+W
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW 237
Query: 180 TVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAIC 239
T+MIT Q P EA+ F G SD T+ SV SA +L ++ + +H +AI
Sbjct: 238 TLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR 297
Query: 240 NAFLEDLCIQNSIVAMYARC---GNVEKARLVFDMMEKRDLISWNSMLTGYIQN-GQASE 295
+ ++D ++ S+V MYA+C G+V+ R VFD ME ++SW +++TGY++N A+E
Sbjct: 298 SGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATE 355
Query: 296 ALLLFDEM-QNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVM 354
A+ LF EM +PN T AC L ++G++ G + ++++ N+V+
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVI 415
Query: 355 DMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPD 414
M+ K ++ A+ F + SE+N+ S+N + G + + +A + S++ E +
Sbjct: 416 SMFVKSDRMEDAQRAFESL--SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIK 474
TF S+LS ++ G I +G + + + KL + ++ M + G + A +
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 475 QMPLPPNDSVWGALLLACRIHG-EIAANYLFQ------LEPEHTGYFVLM---SNIYAAS 524
M N W +++ HG I F ++P Y ++ S++ S
Sbjct: 534 FME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVS 592
Query: 525 NKWREVGKLREDMKNK 540
WR + ED K K
Sbjct: 593 EGWRHFNSMYEDHKIK 608
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 179/360 (49%), Gaps = 15/360 (4%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISS-NSYTFPFVLKACASNSLILEGKVVHGDII 137
+ +I + N G + M R GI +S TF +LK+C GK+VH +I
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM---SVRDLVSWTVMITAYEQAEKPEE 194
DS + +L+ +Y+K G + VF+ M RD+VSW+ M+ Y + +
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE-DLCIQNSIV 253
A+ +F + + GL+ + +V A V + G+ + E D+C+ S++
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 254 AMYARCGN-VEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
M+ + N E A VFD M + ++++W M+T +Q G EA+ F +M S + +
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC---GDLDTAENM 369
T + SAC L + LG++ H + I S + D + +++DMYAKC G +D +
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKV 327
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGH-GRKALEFFSQMLEEG-VKPDHITFTSILSACSH 427
F+ + + +V SW LI GY + + +A+ FS+M+ +G V+P+H TF+S AC +
Sbjct: 328 FDRME--DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKP-NPVTALILVSACTYLGSRQLGRKFHGYII 339
+ ++ ++ G A+ D M +P + VT L+ +C +LG+ H +I
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 340 NSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHP-SERNVSSWNVLIAGYGMHGHGRK 398
+++ D+ L N+++ +Y+K GD AE++F + +R+V SW+ ++A YG +G
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 399 ALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLS-VKPEVKHYACMV 457
A++ F + LE G+ P+ +T+++ ACS++ + GR + K + +V ++
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 458 DMLGRA----GCLYEAFDMIKQMPLPPNDSVWGALLLAC 492
DM + Y+ FD + ++ N W ++ C
Sbjct: 210 DMFVKGENSFENAYKVFDKMSEL----NVVTWTLMITRC 244
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/614 (35%), Positives = 355/614 (57%), Gaps = 18/614 (2%)
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIR 138
N +I++ G + + + S S + T+ ++ C S + + VH I+
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQES----SPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 139 TGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALIL 198
G D ++ L+ MY+ G D KVFD+ R + W + A A EE L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 199 FQKTQQEGLLSDSVTIVSVASAV----GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVA 254
+ K + G+ SD T V A + ++K + +H + + + I ++V
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 255 MYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNP 312
MYAR G V+ A VF M R+++SW++M+ Y +NG+A EAL F EM + D PN
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
VT + ++ AC L + + G+ HGYI+ + + +A++ MY +CG L+ + +F+
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+H +R+V SWN LI+ YG+HG+G+KA++ F +ML G P +TF S+L ACSH GL++
Sbjct: 346 MH--DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
EG++ F M + +KP+++HYACMVD+LGRA L EA M++ M P VWG+LL +
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 492 CRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
CRIHG + A+ LF LEP++ G +VL+++IYA + W EV ++++ ++++GL+K
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDRE 606
+E + + F + D NP ++++ + +A ++K GY+P L+++E E++E
Sbjct: 524 GRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKE 583
Query: 607 HMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRF 666
++ HSEKLA+AFG++N + +++TKNLR+C DCH +FIS ++I+VRD NRF
Sbjct: 584 RIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRF 643
Query: 667 HHFEGGTCSCNDYW 680
H F+ G CSC DYW
Sbjct: 644 HRFKNGVCSCGDYW 657
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 207/394 (52%), Gaps = 14/394 (3%)
Query: 12 YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSI 68
Y+ L+ C +SL ++H + +G +Q L K+I Y+ G + AR +F+
Sbjct: 80 YELLILCCGHRSSLSDALRVHRHILDNG-SDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSL--- 125
K ++WN + RA GH E L LY M R G+ S+ +T+ +VLKAC ++
Sbjct: 139 R--KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVN 196
Query: 126 -ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
+++GK +H + R G+ S Y+ LVDMYA+ G D VF M VR++VSW+ MI
Sbjct: 197 HLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIA 256
Query: 185 AYEQAEKPEEALILFQKTQQEGLLS--DSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF 242
Y + K EAL F++ +E S +SVT+VSV A L + + + +HGY +
Sbjct: 257 CYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 243 LEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDE 302
L + +++V MY RCG +E + VFD M RD++SWNS+++ Y +G +A+ +F+E
Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEE 376
Query: 303 MQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCG 361
M + P PVT + ++ AC++ G + G++ F + +K ++D+ +
Sbjct: 377 MLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRAN 436
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
LD A M D+ +E W L+ +HG+
Sbjct: 437 RLDEAAKMVQDMR-TEPGPKVWGSLLGSCRIHGN 469
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 342/568 (60%), Gaps = 10/568 (1%)
Query: 121 ASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWT 180
AS+S + K +H ++RTGF + + L++ G +VFDEM + W
Sbjct: 19 ASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWN 78
Query: 181 VMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICN 240
+ Y + + P E+L+L++K + G+ D T V A+ QLGD A+H + +
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 241 AFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLF 300
F + +V MY + G + A +F+ M+ +DL++WN+ L +Q G ++ AL F
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYF 198
Query: 301 DEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKC 360
++M + + T + ++SAC LGS ++G + + + + + NA +DM+ KC
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC 258
Query: 361 GDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTS 420
G+ + A +F ++ +RNV SW+ +I GY M+G R+AL F+ M EG++P+++TF
Sbjct: 259 GNTEAARVLFEEM--KQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLG 316
Query: 421 ILSACSHAGLIDEGRKCFADMTK---LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMP 477
+LSACSHAGL++EG++ F+ M + +++P +HYACMVD+LGR+G L EA++ IK+MP
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
Query: 478 LPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGK 532
+ P+ +WGALL AC +H G+ A+ L + P+ Y VL+SNIYAA+ KW V K
Sbjct: 377 VEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDK 436
Query: 533 LREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPD 592
+R M+ G KK AA+S +E+ I F+ D+ +P K +Y+K++ + +I+ GY+PD
Sbjct: 437 VRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPD 496
Query: 593 LSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISY 652
HDVE E++E L++HSEKLA+AFG++ P ++V KNLR C+DCH+ +F+S
Sbjct: 497 TCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSS 556
Query: 653 IYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ +II+RD NRFHHF G CSC ++W
Sbjct: 557 LTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 227/449 (50%), Gaps = 15/449 (3%)
Query: 6 PSTEGFYDQLLK-SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSL 64
P T+ +LL+ S + L++IH+ + +G ++ L +++ G+ AR +
Sbjct: 7 PLTKQMLSELLRASSSKPKQLKKIHAIVLRTGF-SEKNSLLTQLLENLVVIGDMCYARQV 65
Query: 65 FNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNS 124
F+ +H K FLWNT+ + Y N E+L LY MR G+ + +T+PFV+KA +
Sbjct: 66 FDEMH--KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
Query: 125 LILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMIT 184
G +H +++ GF V LV MY K G+ +F+ M V+DLV+W +
Sbjct: 124 DFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 185 AYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLE 244
Q AL F K + + DS T+VS+ SA GQLG + + ++ A
Sbjct: 184 VCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243
Query: 245 DLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ 304
++ ++N+ + M+ +CGN E AR++F+ M++R+++SW++M+ GY NG + EAL LF MQ
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 305 NSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN---AVMDMYAKCG 361
N +PN VT L ++SAC++ G G+++ ++ SN K + ++D+ + G
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSG 363
Query: 362 DLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH---GRKALEFFSQMLEEGVKPDHITF 418
L+ A + P E + W L+ +H G+K + + + + H+
Sbjct: 364 LLEEAYEFIKKM-PVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPD-IGSYHVLL 421
Query: 419 TSILSACSHAGLIDEGRKCFADMTKLSVK 447
++I +A +D+ R + M KL K
Sbjct: 422 SNIYAAAGKWDCVDKVR---SKMRKLGTK 447
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 340/573 (59%), Gaps = 10/573 (1%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L AC + +G+ VH +I+T +L +Y++ L+ Y KC +D KV DEM ++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSWT MI+ Y Q EAL +F + + + T +V ++ + + + +HG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + + + +S++ MYA+ G +++AR +F+ + +RD++S +++ GY Q G E
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 296 ALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMD 355
AL +F + + PN VT L++A + L G++ H +++ + A L+N+++D
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 356 MYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEG-VKPD 414
MY+KCG+L A +F+++ ER SWN ++ GY HG GR+ LE F M +E VKPD
Sbjct: 298 MYSKCGNLSYARRLFDNM--PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 415 HITFTSILSACSHAGLIDEGRKCFADMT--KLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
+T ++LS CSH + D G F M + KP +HY C+VDMLGRAG + EAF+
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 473 IKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKW 527
IK+MP P V G+LL ACR+H GE L ++EPE+ G +V++SN+YA++ +W
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 528 REVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMA 587
+V +R M K + K S I++ + + FH DR +P +EV K++ +++++K A
Sbjct: 476 ADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQA 535
Query: 588 GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAF 647
GY+PDLSC L+DV++E +E ML HSEKLA+ FG++ ++V KNLR+C DCH+
Sbjct: 536 GYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFA 595
Query: 648 RFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+ S ++ R++ +RD NRFH G CSC DYW
Sbjct: 596 KIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 199/401 (49%), Gaps = 13/401 (3%)
Query: 1 MRRLGPSTEGF--YDQLLKSCNFLASLR---QIHSSLTTSGLINQALHLGAKIIIKYTTY 55
M LGP GF YD LL +C +LR ++H+ + + + A +L +++I Y
Sbjct: 43 MAMLGPEM-GFHGYDALLNACLDKRALRDGQRVHAHMIKTRYL-PATYLRTRLLIFYGKC 100
Query: 56 GEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPF 115
AR + + + S W MI Y+ GH E L +++ M RS N +TF
Sbjct: 101 DCLEDARKVLDEMPEKNVVS--WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFAT 158
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
VL +C S + GK +HG I++ + S +V ++L+DMYAK GQ + ++F+ + RD
Sbjct: 159 VLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERD 218
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VS T +I Y Q EEAL +F + EG+ + VT S+ +A+ L + + H
Sbjct: 219 VVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC 278
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + +QNS++ MY++CGN+ AR +FD M +R ISWN+ML GY ++G E
Sbjct: 279 HVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGRE 338
Query: 296 ALLLFDEMQNSD-CKPNPVTALILVSACTYLGSRQLGRK-FHGYIINS-NMKIDATLRNA 352
L LF M++ KP+ VT L ++S C++ G F G + K
Sbjct: 339 VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGC 398
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
++DM + G +D A + PS+ L+ +H
Sbjct: 399 IVDMLGRAGRIDEAFEFIKRM-PSKPTAGVLGSLLGACRVH 438
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/662 (34%), Positives = 377/662 (56%), Gaps = 16/662 (2%)
Query: 28 IHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYAN 87
+HS + G + A +GA +I Y+ G ++AR++F I +W ++ Y
Sbjct: 168 LHSPIVKLGYDSNAF-VGAALINAYSVCGSVDSARTVFEGILCKDI--VVWAGIVSCYVE 224
Query: 88 NGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYV 147
NG+ ++L+L S MR +G N+YTF LKA K VHG I++T ++ D V
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 148 QAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGL 207
L+ +Y + G D KVF+EM D+V W+ MI + Q EA+ LF + ++ +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV 344
Query: 208 LSDSVTIVSV--ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKA 265
+ + T+ S+ A+G+ + + +HG + F D+ + N+++ +YA+C ++ A
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 266 RLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYL 325
+F + ++ +SWN+++ GY G+ +A +F E + VT + AC L
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 326 GSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNV 385
S LG + HG I +N + N+++DMYAKCGD+ A+++FN++ + V+SWN
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID--VASWNA 520
Query: 386 LIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-L 444
LI+GY HG GR+AL M + KP+ +TF +LS CS+AGLID+G++CF M +
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 445 SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLAC--RIHGEIA--- 499
++P ++HY CMV +LGR+G L +A +I+ +P P+ +W A+L A + + E A
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRS 640
Query: 500 ANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQG 559
A + ++ P+ +VL+SN+YA + +W V +R+ MK G+KK S IE+ D+
Sbjct: 641 AEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHY 700
Query: 560 FHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVA 619
F +P K + +E + ++ AGY+PD + L D++DE+++ L HSE+LA+A
Sbjct: 701 FSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALA 760
Query: 620 FGIMNL-TPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCND 678
+G++ + + + + KNLR+C+DCHSA + IS I +R +++RD NRFHHF G CSC D
Sbjct: 761 YGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGD 820
Query: 679 YW 680
+W
Sbjct: 821 HW 822
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 232/490 (47%), Gaps = 17/490 (3%)
Query: 12 YDQLLKSC---NFLASLRQIHSSLTTSGLINQALHLGAKIII--KYTTYGEPNTARSLFN 66
Y +L+ C N S + IH + G L L A I+ Y G A +LF+
Sbjct: 52 YGAMLRRCIQKNDPISAKAIHCDILKKG---SCLDLFATNILLNAYVKAGFDKDALNLFD 108
Query: 67 SIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLI 126
+ + SF+ T+ + YA C + + LYS + R G N + F LK S
Sbjct: 109 EMPERNNVSFV--TLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
+H I++ G+ S+++V AAL++ Y+ CG D VF+ + +D+V W +++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ E++L L + G + ++ T + A LG A+ VHG + ++ D
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+ ++ +Y + G++ A VF+ M K D++ W+ M+ + QNG +EA+ LF M+ +
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
PN T +++ C LG + HG ++ +D + NA++D+YAKC +DTA
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
+F ++ S +N SWN +I GY G G KA F + L V +TF+S L AC+
Sbjct: 403 VKLFAEL--SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 427 HAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWG 486
+D G + K + +V ++DM + G + A + +M S W
Sbjct: 461 SLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS-WN 519
Query: 487 ALLLACRIHG 496
AL+ HG
Sbjct: 520 ALISGYSTHG 529
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 193/383 (50%), Gaps = 22/383 (5%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+G + Q+LK+C L +G ++ YT G+ + A +FN
Sbjct: 266 AKGVHGQILKTCYVLDP------------------RVGVGLLQLYTQLGDMSDAFKVFNE 307
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+ K+ W+ MI + NG C E ++L+ MR + + N +T +L CA
Sbjct: 308 M--PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYE 187
G+ +HG +++ GF D YV AL+D+YAKC + D K+F E+S ++ VSW +I YE
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 188 QAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLC 247
+ +A +F++ + + VT S A L + VHG AI + +
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 248 IQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD 307
+ NS++ MYA+CG+++ A+ VF+ ME D+ SWN++++GY +G +AL + D M++ D
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 308 CKPNPVTALILVSACTYLGSRQLGRK-FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
CKPN +T L ++S C+ G G++ F I + ++ ++ + + G LD A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 367 ENMFNDIHPSERNVSSWNVLIAG 389
+ I P E +V W +++
Sbjct: 606 MKLIEGI-PYEPSVMIWRAMLSA 627
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 179/389 (46%), Gaps = 7/389 (1%)
Query: 109 NSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVF 168
+S+ + +L+ C + + K +H DI++ G D + L++ Y K G D +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
DEM R+ VS+ + Y ++ + L+ + +EG + S L
Sbjct: 108 DEMPERNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
+H + + + + +++ Y+ CG+V+ AR VF+ + +D++ W +++ Y+
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
+NG ++L L M+ + PN T + A LG+ + HG I+ + +D
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ ++ +Y + GD+ A +FN++ + +V W+ +IA + +G +A++ F +M E
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEM--PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 409 EGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYE 468
V P+ T +SIL+ C+ G + + K+ ++ ++D+ + +
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 469 AFDMIKQMPLPPNDSVWGALLLACRIHGE 497
A + ++ N+ W +++ GE
Sbjct: 402 AVKLFAELS-SKNEVSWNTVIVGYENLGE 429
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/770 (32%), Positives = 394/770 (51%), Gaps = 128/770 (16%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSY----------- 74
R +H ++ T G +A H+ ++I Y E N AR LF+ I
Sbjct: 34 RAVHGNIITFGFQPRA-HILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 75 --------------------SFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFP 114
+ ++N MI +++N + L+ M+ G +++TF
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 115 FVLKACASNSLILEGK----VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD----GCK 166
VL A L+ + + H +++G + V ALV +Y+KC + K
Sbjct: 153 SVLAGLA---LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARK 209
Query: 167 VFDEMSVRDLVSWTVMITAY------EQAEKP--------------------------EE 194
VFDE+ +D SWT M+T Y + E+ +E
Sbjct: 210 VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQE 269
Query: 195 ALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQ--NSI 252
AL + ++ G+ D T SV A G + + VH Y + ED NS+
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR---EDFSFHFDNSL 326
Query: 253 VAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
V++Y +CG ++AR +F+ M +DL+SWN++L+GY+ +G EA L+F EM+ + N
Sbjct: 327 VSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK----EKNI 382
Query: 313 VTALILVS-----------------------------------ACTYLGSRQLGRKFHGY 337
++ +I++S +C LG+ G+++H
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 338 IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGR 397
++ + NA++ MYAKCG ++ A +F + P +VS WN LIA G HGHG
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM-PCLDSVS-WNALIAALGQHGHGA 500
Query: 398 KALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACM 456
+A++ + +ML++G++PD IT ++L+ACSHAGL+D+GRK F M T + P HYA +
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 457 VDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE-----IAANYLFQLEPEHT 511
+D+L R+G +A +I+ +P P +W ALL CR+HG IAA+ LF L PEH
Sbjct: 561 IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Query: 512 GYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWK 571
G ++L+SN++AA+ +W EV ++R+ M+++G+KK A S IE + F D +P +
Sbjct: 621 GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAE 680
Query: 572 EVYKKVESMAVEIKMAGYMPDLSCALHDVE-DEDREHMLNYHSEKLAVAFGIMNLTPEAV 630
VY ++ + E++ GY+PD S LHDVE D +E ML HSEK+AVAFG+M L P
Sbjct: 681 AVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTT 740
Query: 631 VQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
+++ KNLR C DCH+ FRF+S++ +R II+RD RFHHF G CSC ++W
Sbjct: 741 IRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 163/390 (41%), Gaps = 84/390 (21%)
Query: 230 AQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQ 289
A+AVHG I F I N ++ +Y + + AR +FD + + D I+ +M++GY
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 290 NGQAS---------------------------------EALLLFDEMQNSDCKPNPVT-A 315
+G + A+ LF +M++ KP+ T A
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 316 LILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGD----LDTAENMFN 371
+L + +FH + S ++ NA++ +Y+KC L +A +F+
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 372 DIHPSERNVSSW--------------------------------NVLIAGYGMHGHGRKA 399
+I E++ SW N +I+GY G ++A
Sbjct: 213 EI--LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 400 LEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHY-ACMVD 458
LE +M+ G++ D T+ S++ AC+ AGL+ G++ A + L + H+ +V
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV--LRREDFSFHFDNSLVS 328
Query: 459 MLGRAGCLYEAFDMIKQMPLPPNDSV-WGALLLACRIHGEIA-ANYLFQLEPEHT--GYF 514
+ + G EA + ++M P D V W ALL G I A +F+ E +
Sbjct: 329 LYYKCGKFDEARAIFEKM--PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 515 VLMSNIYAASNKWREVG-KLREDMKNKGLK 543
+++S + A N + E G KL MK +G +
Sbjct: 387 IMISGL--AENGFGEEGLKLFSCMKREGFE 414
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 9 EGF------YDQLLKSCNFLASL---RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPN 59
EGF + +KSC L + +Q H+ L G + +L G +I Y G
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF-DSSLSAGNALITMYAKCGVVE 469
Query: 60 TARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKA 119
AR +F ++ S S WN +I A +GH E +++Y M + GI + T VL A
Sbjct: 470 EARQVFRTMPCLDSVS--WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 120 CASNSLILEGKVVHGD---IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDL 176
C+ L+ +G+ + R +D Y A L+D+ + G+ D V + + +
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHY--ARLIDLLCRSGKFSDAESVIESLPFKPT 585
Query: 177 VS-WTVMITA 185
W +++
Sbjct: 586 AEIWEALLSG 595
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 33/142 (23%)
Query: 327 SRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSE--------- 377
S QL R HG II + A + N ++D+Y K +L+ A +F++I +
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 378 ----------------------RNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
R+ +N +I G+ + G A+ F +M EG KPD+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 416 ITFTSILSACSHAGLIDEGRKC 437
TF S+L+ A + D+ ++C
Sbjct: 149 FTFASVLAGL--ALVADDEKQC 168
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/652 (34%), Positives = 363/652 (55%), Gaps = 13/652 (1%)
Query: 38 INQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLEL 97
+++ L L ++ Y+ G A+ +F +N S WNTM+ ++ G T ++
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS--WNTMVGGFSAEGDTHGTFDV 380
Query: 98 YSTMRRSG--ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMY 155
M G + ++ T + C S + K +H ++ F+ + V A V Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 156 AKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIV 215
AKCG +VF + + + SW +I + Q+ P +L + + GLL DS T+
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 216 SVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKR 275
S+ SA +L + + VHG+ I N DL + S++++Y CG + + +FD ME +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 276 DLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFH 335
L+SWN+++TGY+QNG AL +F +M + ++ + + AC+ L S +LGR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 336 GYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGH 395
Y + ++ DA + +++DMYAK G + + +FN + E++ +SWN +I GYG+HG
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL--KEKSTASWNAMIMGYGIHGL 678
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYA 454
++A++ F +M G PD +TF +L+AC+H+GLI EG + M + +KP +KHYA
Sbjct: 679 AKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 738
Query: 455 CMVDMLGRAGCLYEAFDMI-KQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEP 508
C++DMLGRAG L +A ++ ++M + +W +LL +CRIH GE A LF+LEP
Sbjct: 739 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 798
Query: 509 EHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNP 568
E +VL+SN+YA KW +V K+R+ M L+K A S IE + + F +R
Sbjct: 799 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 858
Query: 569 YWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPE 628
++E+ + ++I GY PD HD+ +E++ L HSEKLA+ +G++ +
Sbjct: 859 GFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEG 918
Query: 629 AVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
++V KNLR+C DCH+A + IS + R+I+VRD RFHHF+ G CSC DYW
Sbjct: 919 TTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 207/408 (50%), Gaps = 11/408 (2%)
Query: 26 RQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAY 85
R+IH ++ S + L +II Y G P+ +R +F+++ + F WN +I +Y
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNL--FQWNAVISSY 161
Query: 86 ANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ N E LE + M + + + +T+P V+KACA S + G VHG +++TG + D
Sbjct: 162 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED 221
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
+V ALV Y G D ++FD M R+LVSW MI + EE+ +L + +
Sbjct: 222 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 281
Query: 205 E----GLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCG 260
E + D T+V+V + ++ + VHG+A+ ++L + N+++ MY++CG
Sbjct: 282 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 341
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM--QNSDCKPNPVTALIL 318
+ A+++F M ++++SWN+M+ G+ G + +M D K + VT L
Sbjct: 342 CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNA 401
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
V C + ++ H Y + + + NA + YAKCG L A+ +F+ I +
Sbjct: 402 VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS--K 459
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
V+SWN LI G+ R +L+ QM G+ PD T S+LSACS
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/707 (32%), Positives = 387/707 (54%), Gaps = 36/707 (5%)
Query: 5 GPSTEGFYDQLLKSCNFLASLRQIHSSLTTSGLI-----------NQALHLGA------- 46
G S+ G+Y++ L+ + L + + S T S ++ Q LH A
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 47 ------KIIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRAYANNGHCVETLELYST 100
++ Y + P AR +F+ + S S+ NTMI Y E++ ++
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSY--NTMICGYLKLEMVEESVRMF-L 297
Query: 101 MRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQ 160
+ T VL+AC + K ++ +++ GF+ +S V+ L+D+YAKCG
Sbjct: 298 ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 161 TDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASA 220
VF+ M +D VSW +I+ Y Q+ EA+ LF+ +D +T + + S
Sbjct: 358 MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 221 VGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISW 280
+L D+ + +H I + DL + N+++ MYA+CG V + +F M D ++W
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477
Query: 281 NSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIIN 340
N++++ ++ G + L + +M+ S+ P+ T L+ + C L +++LG++ H ++
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537
Query: 341 SNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKAL 400
+ + + NA+++MY+KCG L+ + +F + S R+V +W +I YGM+G G KAL
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLENSSRVFERM--SRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 401 EFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDM 459
E F+ M + G+ PD + F +I+ ACSH+GL+DEG CF M T + P ++HYAC+VD+
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 460 LGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI-----AANYLFQLEPEHTGYF 514
L R+ + +A + I+ MP+ P+ S+W ++L ACR G++ + + +L P+ GY
Sbjct: 656 LSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715
Query: 515 VLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVY 574
+L SN YAA KW +V +R+ +K+K + K +S IE GK++ F + D P + +Y
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIY 775
Query: 575 KKVESMAVEIKMAGYMPDLSCALHDV-EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQV 633
K +E + + GY+PD ++ E+E++ ++ HSE+LA+AFG++N P +QV
Sbjct: 776 KSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQV 835
Query: 634 TKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLRVC DCH + IS I R+I+VRDANRFH F+ GTCSC D W
Sbjct: 836 MKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 270 bits (689), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 275/492 (55%), Gaps = 10/492 (2%)
Query: 11 FYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHN 70
F + L S + L LR+IH+ + + GL + G K+I KY+ + EP ++ S+F +
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDSSDFFSG-KLIDKYSHFREPASSLSVFRRVSP 67
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
K+ +LWN++IRA++ NG E LE Y +R S +S + YTFP V+KACA G
Sbjct: 68 AKNV-YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAE 190
+V+ I+ GF SD +V ALVDMY++ G +VFDEM VRDLVSW +I+ Y
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 191 KPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQN 250
EEAL ++ + + ++ DS T+ SV A G L V + Q +HG+A+ + + + N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 251 SIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CK 309
+VAMY + AR VFD M+ RD +S+N+M+ GY++ E++ +F ++N D K
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFK 304
Query: 310 PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENM 369
P+ +T ++ AC +L L + + Y++ + +++T+RN ++D+YAKCGD+ TA ++
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 370 FNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAG 429
FN + ++ SWN +I+GY G +A++ F M+ + DHIT+ ++S +
Sbjct: 365 FNSMEC--KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 430 LIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSV-WGAL 488
+ G+ ++ K + ++ ++DM + G + ++ + M D+V W +
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM--GTGDTVTWNTV 480
Query: 489 LLACRIHGEIAA 500
+ AC G+ A
Sbjct: 481 ISACVRFGDFAT 492
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 198/413 (47%), Gaps = 12/413 (2%)
Query: 114 PFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMS- 172
PF+ +A +S+S + E + +H +I G S + L+D Y+ + VF +S
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 173 VRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQA 232
+++ W +I A+ + EAL + K ++ + D T SV A L D
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 233 VHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQ 292
V+ + F DL + N++V MY+R G + +AR VFD M RDL+SWNS+++GY +G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 293 ASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNA 352
EAL ++ E++NS P+ T ++ A L + G+ HG+ + S + + N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 353 VMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVK 412
++ MY K A +F+++ R+ S+N +I GY +++ F + L++ K
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDV--RDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FK 304
Query: 413 PDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDM 472
PD +T +S+L AC H + + + M K E ++D+ + G + A D+
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 473 IKQMPLPPNDSVWGALLLACRIHGEI-AANYLFQL------EPEHTGYFVLMS 518
M S W +++ G++ A LF++ + +H Y +L+S
Sbjct: 365 FNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/639 (34%), Positives = 350/639 (54%), Gaps = 44/639 (6%)
Query: 80 TMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRT 139
T I + G+ E + + R I +N+ F +++C + + GK +H ++ +
Sbjct: 18 TAIATLCSKGNLREAFQRF----RLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVS 73
Query: 140 GFLSDSYVQAALVDMYAKCGQTDDGC-------------------------------KVF 168
GF SD ++ L+ MY+K G KVF
Sbjct: 74 GFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVF 133
Query: 169 DEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVL 228
DEM R L +W MI Q E EE L LF++ G D T+ SV S L V
Sbjct: 134 DEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVS 193
Query: 229 KAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYI 288
Q +HGY I DL + +S+ MY R G ++ +V M R+L++WN+++ G
Sbjct: 194 IGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNA 253
Query: 289 QNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDAT 348
QNG L L+ M+ S C+PN +T + ++S+C+ L R G++ H I
Sbjct: 254 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 313
Query: 349 LRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ ++++ MY+KCG L A F++ + + W+ +I+ YG HG G +A+E F+ M E
Sbjct: 314 VVSSLISMYSKCGCLGDAAKAFSEREDEDEVM--WSSMISAYGFHGQGDEAIELFNTMAE 371
Query: 409 E-GVKPDHITFTSILSACSHAGLIDEGRKCFADMT-KLSVKPEVKHYACMVDMLGRAGCL 466
+ ++ + + F ++L ACSH+GL D+G + F M K KP +KHY C+VD+LGRAGCL
Sbjct: 372 QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 431
Query: 467 YEAFDMIKQMPLPPNDSVWGALLLACRIH--GEIAANY---LFQLEPEHTGYFVLMSNIY 521
+A +I+ MP+ + +W LL AC IH E+A + Q++P + +VL++N++
Sbjct: 432 DQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVH 491
Query: 522 AASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMA 581
A++ +WR+V ++R+ M++K +KK A S E+ ++ F DR KE+Y ++ +
Sbjct: 492 ASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELT 551
Query: 582 VEIKMAGYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCN 641
+E+K+ GY PD + LHD+++E++E L HSEKLAVAF +M L A +++ KNLRVC+
Sbjct: 552 LEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCS 611
Query: 642 DCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
DCH AF++IS I R+I +RD +RFHHF G CSC DYW
Sbjct: 612 DCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 186/397 (46%), Gaps = 10/397 (2%)
Query: 19 CNFLAS----LRQIHSSLTTSGLINQALHLGAKIIIK-YTTYGEPNTARSLFNSIHNDKS 73
CN L S L S++ G + + ++ + I+I Y G+ AR +F+ + + K
Sbjct: 82 CNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKL 141
Query: 74 YSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVH 133
+ WN MI E L L+ M G S + YT V A + G+ +H
Sbjct: 142 TT--WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH 199
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G I+ G D V ++L MY + G+ DG V M VR+LV+W +I Q PE
Sbjct: 200 GYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPE 259
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
L L++ + G + +T V+V S+ L + Q +H AI + + +S++
Sbjct: 260 TVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLI 319
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEM-QNSDCKPNP 312
+MY++CG + A F E D + W+SM++ Y +GQ EA+ LF+ M + ++ + N
Sbjct: 320 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 379
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINS-NMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V L L+ AC++ G + G + ++ K V+D+ + G LD AE +
Sbjct: 380 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 439
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE 408
+ P + ++ W L++ +H + A F ++L+
Sbjct: 440 SM-PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 475
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/676 (34%), Positives = 372/676 (55%), Gaps = 53/676 (7%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGE--PNTARSLFNSIHNDK 72
LL SC L +L QIH G+ + G I+ + + P R L D
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD- 69
Query: 73 SYSFLWNTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKV 131
+F++NT++R Y+ + ++ ++ M R G + +S++F FV+KA + + G
Sbjct: 70 --AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEK 191
+H ++ G S +V L+ MY CG + KVFDEM +LV+W +ITA +
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 192 PEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNS 251
A +F K + + N
Sbjct: 188 VAGAREIFDKM---------------------------------------LVRNHTSWNV 208
Query: 252 IVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPN 311
++A Y + G +E A+ +F M RD +SW++M+ G NG +E+ L F E+Q + PN
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V+ ++SAC+ GS + G+ HG++ + ++ NA++DMY++CG++ A +F
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +R + SW +IAG MHG G +A+ F++M GV PD I+F S+L ACSHAGLI
Sbjct: 329 GMQ-EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLI 387
Query: 432 DEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG F++M ++ ++PE++HY CMVD+ GR+G L +A+D I QMP+PP VW LL
Sbjct: 388 EEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLG 447
Query: 491 ACRIHGEI-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
AC HG I L +L+P ++G VL+SN YA + KW++V +R+ M + +KK
Sbjct: 448 ACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKT 507
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIK-MAGYMPDLSCALHDVEDED 604
A+S++E GK + F ++ E ++K++ + + +K AGY P+++ AL+DVE+E+
Sbjct: 508 TAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEE 567
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E ++ HSEKLA+AF + L+ A +++ KNLR+C DCH+ + S +Y +I+VRD N
Sbjct: 568 KEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRN 627
Query: 665 RFHHFEGGTCSCNDYW 680
RFH F+ G+CSC DYW
Sbjct: 628 RFHSFKDGSCSCRDYW 643
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/607 (35%), Positives = 344/607 (56%), Gaps = 40/607 (6%)
Query: 112 TFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEM 171
T+ +++ C+ + EGK VH I +GF+ + L+ MYAKCG D KVFDEM
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 172 SVRDLV-------------------------------SWTVMITAYEQAEKPEEALILFQ 200
RDL SWT M+T Y + ++PEEAL+L+
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 201 KTQQEGLLSDSVTIVSVASAVGQLGD-VLKAQAVHGYAICNAFLEDLCIQNSIVAMYARC 259
Q+ ++ VS+A A + + + +HG+ + D + +S++ MY +C
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 260 GNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILV 319
G +++AR +FD + ++D++SW SM+ Y ++ + E LF E+ S +PN T ++
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 320 SACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERN 379
+AC L + +LG++ HGY+ + ++++DMY KCG++++A+++ + + +
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC--PKPD 384
Query: 380 VSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFA 439
+ SW LI G +G +AL++F +L+ G KPDH+TF ++LSAC+HAGL+++G + F
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 440 DMT-KLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGEI 498
+T K + HY C+VD+L R+G + +I +MP+ P+ +W ++L C +G I
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 499 -----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEY 553
AA LF++EPE+ +V M+NIYAA+ KW E GK+R+ M+ G+ K S E
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Query: 554 GKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYHS 613
+ F AD +P + ++ + + + ++K GY+P S LHDVEDE +E L YHS
Sbjct: 565 KRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 624
Query: 614 EKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGT 673
EKLAVAF I++ ++V KNLR C DCH A +FIS I +RKI VRD+ RFH FE G
Sbjct: 625 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQ 684
Query: 674 CSCNDYW 680
CSC DYW
Sbjct: 685 CSCGDYW 691
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 218/443 (49%), Gaps = 18/443 (4%)
Query: 11 FYDQLLK---SCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
+++LL+ C L R++ + L + + ++ Y G AR LF+
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNV-----MVNGYAEVGLLEEARKLFDE 176
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLI 126
+ SYS W M+ Y E L LYS M+R S N +T + A A+ I
Sbjct: 177 MTEKDSYS--WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
GK +HG I+R G SD + ++L+DMY KCG D+ +FD++ +D+VSWT MI Y
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY 294
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
++ + E LF + + T V +A L + VHGY F
Sbjct: 295 FKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS 354
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+S+V MY +CGN+E A+ V D K DL+SW S++ G QNGQ EAL FD + S
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLD 364
KP+ VT + ++SACT+ G + G +F Y I ++ T + ++D+ A+ G +
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFF-YSITEKHRLSHTSDHYTCLVDLLARSGRFE 473
Query: 365 TAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH-ITFTSILS 423
+++ +++ P + + W ++ G +G+ A E ++ + ++P++ +T+ ++ +
Sbjct: 474 QLKSVISEM-PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMAN 530
Query: 424 ACSHAGLIDEGRKCFADMTKLSV 446
+ AG +E K M ++ V
Sbjct: 531 IYAAAGKWEEEGKMRKRMQEIGV 553
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 123/279 (44%), Gaps = 25/279 (8%)
Query: 309 KPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAEN 368
KP T L+ C+ + + G+K H +I S + N ++ MYAKCG L A
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 369 MFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHA 428
+F+++ R++ SWNV++ GY G +A + F +M E+ D ++T++++
Sbjct: 142 VFDEM--PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKK 195
Query: 429 GLIDEGRKCFADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDM---IKQMPLPPNDSV 484
+E ++ M ++ + +P + + V C+ ++ I + L ++ +
Sbjct: 196 DQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL 255
Query: 485 WGALLLACRIHGEI--AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGL 542
W +L+ G I A N ++ + + M + Y S++WRE L ++
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SC 314
Query: 543 KKP------------AAFSVIEYGKDIQGFHTADRVNPY 569
++P A + E GK + G+ T +PY
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 396 GRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYAC 455
G+K L Q+L KP T+ +++ CS ++EG+K + P + +
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 456 MVDMLGRAGCLYEAFDMIKQMP 477
++ M + G L +A + +MP
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMP 147
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/510 (38%), Positives = 314/510 (61%), Gaps = 10/510 (1%)
Query: 179 WTVMITAYEQAEKPEEALILFQKTQQEGLLS-DSVTIVSVASAVGQLGDVLKAQAVHGYA 237
W +I Y + A L+++ + GL+ D+ T + AV + DV + +H
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 238 ICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEAL 297
I + F + +QNS++ +YA CG+V A VFD M ++DL++WNS++ G+ +NG+ EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 298 LLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMY 357
L+ EM + KP+ T + L+SAC +G+ LG++ H Y+I + + N ++D+Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 358 AKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLE-EGVKPDHI 416
A+CG ++ A+ +F+++ ++N SW LI G ++G G++A+E F M EG+ P I
Sbjct: 268 ARCGRVEEAKTLFDEM--VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 417 TFTSILSACSHAGLIDEGRKCFADM-TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQ 475
TF IL ACSH G++ EG + F M + ++P ++H+ CMVD+L RAG + +A++ IK
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 476 MPLPPNDSVWGALLLACRIHG-----EIAANYLFQLEPEHTGYFVLMSNIYAASNKWREV 530
MP+ PN +W LL AC +HG E A + QLEP H+G +VL+SN+YA+ +W +V
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDV 445
Query: 531 GKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYM 590
K+R+ M G+KK S++E G + F D+ +P +Y K++ M ++ GY+
Sbjct: 446 QKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 505
Query: 591 PDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFI 650
P +S DVE+E++E+ + YHSEK+A+AF +++ + + V KNLRVC DCH A + +
Sbjct: 506 PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLV 565
Query: 651 SYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
S +Y R+I+VRD +RFHHF+ G+CSC DYW
Sbjct: 566 SKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 215/401 (53%), Gaps = 12/401 (2%)
Query: 22 LASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEP---NTARSLFNSIHNDKSYSFLW 78
+ LRQIH+ G+ LG +I + P + A +F+ I + F+W
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV-FIW 88
Query: 79 NTMIRAYANNGHCVETLELYSTMRRSG-ISSNSYTFPFVLKACASNSLILEGKVVHGDII 137
NT+IR YA G+ + LY MR SG + +++T+PF++KA + + + G+ +H +I
Sbjct: 89 NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 138 RTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALI 197
R+GF S YVQ +L+ +YA CG KVFD+M +DLV+W +I + + KPEEAL
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 198 LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA 257
L+ + +G+ D TIVS+ SA ++G + + VH Y I +L N ++ +YA
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 258 RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSD-CKPNPVTAL 316
RCG VE+A+ +FD M ++ +SW S++ G NG EA+ LF M++++ P +T +
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 317 ILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFNDIH 374
++ AC++ G + G ++ + KI+ + + ++D+ A+ G + A +
Sbjct: 329 GILYACSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM- 386
Query: 375 PSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDH 415
P + NV W L+ +HG A Q+L+ ++P+H
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ--LEPNH 425
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/616 (36%), Positives = 346/616 (56%), Gaps = 53/616 (8%)
Query: 115 FVLKACASNSLILEGKVVHGDIIRTGF--LSDSYVQAALVDMYAKCGQTDDGCKVFDE-- 170
+L+ CA S + GK +H + +G SY+ AL YA G+ K+FDE
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 171 MSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKA 230
+S +D V WT +++++ + ++ LF + +++ + D V++V + +L D+ A
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 231 QAVHGYAICNAFLEDLCIQNSIVAMYARCGNV---------------------------- 262
Q HG A+ L + + N+++ MY +CG V
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 263 ---EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ-NSDCKPNPVTALIL 318
E+ R VF M +R+ ++W M+ GY+ G E L L EM N VT +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKI-------DATLRNAVMDMYAKCGDLDTAENMFN 371
+SAC G+ +GR H Y + M + D + A++DMYAKCG++D++ N+F
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+ +RNV +WN L +G MHG GR ++ F QM+ E VKPD +TFT++LSACSH+G++
Sbjct: 311 LMR--KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIV 367
Query: 432 DEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
DEG +CF + ++P+V HYACMVD+LGRAG + EA ++++MP+PPN+ V G+LL +
Sbjct: 368 DEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 492 CRIHG--EIAANY---LFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C +HG EIA L Q+ P +T Y +LMSN+Y A + LR ++ +G++K
Sbjct: 428 CSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIP 487
Query: 547 AFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVED--ED 604
S I + F + DR +P KE+Y K+ + I+ AGY+PD+S + E E+
Sbjct: 488 GLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEE 547
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
+E L HSEKLAV FG++ P + V KNLR+C DCHSA + +S +Y R+II+RD N
Sbjct: 548 KEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRN 607
Query: 665 RFHHFEGGTCSCNDYW 680
RFH F+GG+CSC+DYW
Sbjct: 608 RFHQFKGGSCSCSDYW 623
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 225/478 (47%), Gaps = 55/478 (11%)
Query: 15 LLKSC---NFLASLRQIHSSLTTSGLINQAL-HLGAKIIIKYTTYGEPNTARSLFNSIHN 70
LL+ C +FL +++H+ LTTSGL +L + Y + GE TA+ LF+ I
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 71 DKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGK 130
+ + W T++ +++ G V +++L+ MRR + + + + CA + +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 131 VVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD--------------------------- 163
HG ++ G L+ V AL+DMY KCG +
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 164 ----GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEAL-ILFQKTQQEGLLSDSVTIVSVA 218
G +VF EM R+ V+WTVM+ Y A E L +L + + G + VT+ S+
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 219 SAVGQLGDVLKAQAVHGYAICNAFL-------EDLCIQNSIVAMYARCGNVEKARLVFDM 271
SA Q G+++ + VH YA+ + +D+ + ++V MYA+CGN++ + VF +
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 272 MEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLG 331
M KR++++WN++ +G +G+ + +F +M + KP+ +T ++SAC++ G G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEG 370
Query: 332 -RKFHGY-IINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAG 389
R FH K+D ++D+ + G ++ AE + ++ P N L+
Sbjct: 371 WRCFHSLRFYGLEPKVDHY--ACMVDLLGRAGLIEEAEILMREM-PVPPNEVVLGSLLGS 427
Query: 390 YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVK 447
+HG A ++++ + P + + ++S + EGR AD + S++
Sbjct: 428 CSVHGKVEIAERIKRELIQ--MSPGNTEYQILMSNM----YVAEGRSDIADGLRGSLR 479
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/675 (35%), Positives = 370/675 (54%), Gaps = 33/675 (4%)
Query: 27 QIHSSLTTSGLINQALHLGAK--IIIKYTTYGEPNTARSLFNSIHNDKSYSFLWNTMIRA 84
Q+H L SG L+L +I Y EP A +F+S+ S W+ ++
Sbjct: 27 QVHCYLLKSG---SGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVS--WSALMSG 81
Query: 85 YANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSD 144
+ NG +L L+S M R GI N +TF LKAC + + +G +HG ++ GF
Sbjct: 82 HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141
Query: 145 SYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQ 204
V +LVDMY+KCG+ ++ KVF + R L+SW MI + A +AL F Q+
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201
Query: 205 EGL--LSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAF--LEDLCIQNSIVAMYARCG 260
+ D T+ S+ A G + + +HG+ + + F I S+V +Y +CG
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 261 NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQ--NSDCKPNPVTALIL 318
+ AR FD ++++ +ISW+S++ GY Q G+ EA+ LF +Q NS ++++I
Sbjct: 262 YLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG 321
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
V A + RQ G++ + ++ ++ N+V+DMY KCG +D AE F ++ +
Sbjct: 322 VFA-DFALLRQ-GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL--K 377
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
+V SW V+I GYG HG G+K++ F +ML ++PD + + ++LSACSH+G+I EG + F
Sbjct: 378 DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Query: 439 ADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ + + +KP V+HYAC+VD+LGRAG L EA +I MP+ PN +W LL CR+HG+
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Query: 498 I-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
I L +++ ++ +V+MSN+Y + W E G RE KGLKK A S +E
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Query: 553 YGKDIQGFHTADR---VNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHML 609
+++ F + + + P +E K+ E E GY+ L LHD++DE +E L
Sbjct: 558 IEREVHFFRSGEDSHPLTPVIQETLKEAERRLRE--ELGYVYGLKHELHDIDDESKEENL 615
Query: 610 NYHSEKLAV----AFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
HSEKLA+ A G +N + ++V KNLRVC DCH + +S I + +VRDA R
Sbjct: 616 RAHSEKLAIGLALATGGLNQKGKT-IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVR 674
Query: 666 FHHFEGGTCSCNDYW 680
FH FE G CSC DYW
Sbjct: 675 FHSFEDGCCSCGDYW 689
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 205/414 (49%), Gaps = 14/414 (3%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRD 175
+L+ C L +G VH ++++G + L+DMY KC + KVFD M R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 176 LVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHG 235
+VSW+ +++ + + +L LF + ++G+ + T + A G L + K +HG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 236 YAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASE 295
+ + F + + NS+V MY++CG + +A VF + R LISWN+M+ G++ G S+
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 296 ALLLFDEMQNSDCK--PNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKI--DATLRN 351
AL F MQ ++ K P+ T L+ AC+ G G++ HG+++ S AT+
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 352 AVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGV 411
+++D+Y KCG L +A F+ I E+ + SW+ LI GY G +A+ F ++ E
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQI--KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 412 KPDHITFTSILSACSHAGLIDEGRKCFADMTKLSVKPEVKHYACMVDMLGRAGCLYEAFD 471
+ D +SI+ + L+ +G++ A KL E +VDM + G + EA
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEK 369
Query: 472 MIKQMPLPPNDSVWGALLLACRIH--GEIAANYLFQL-----EPEHTGYFVLMS 518
+M L S W ++ H G+ + +++ EP+ Y ++S
Sbjct: 370 CFAEMQLKDVIS-WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 155/300 (51%), Gaps = 14/300 (4%)
Query: 214 IVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMME 273
+VS+ + G + VH Y + + +L N ++ MY +C A VFD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 274 KRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK 333
+R+++SW+++++G++ NG +L LF EM PN T + AC L + + G +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 334 FHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
HG+ + ++ + N+++DMY+KCG ++ AE +F I +R++ SWN +IAG+
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI--VDRSLISWNAMIAGFVHA 186
Query: 394 GHGRKALEFFSQMLEEGVK--PDHITFTSILSACSHAGLIDEGRKC--FADMTKLSVKPE 449
G+G KAL+ F M E +K PD T TS+L ACS G+I G++ F +
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 450 VKHYACMVDMLGRAGCLY---EAFDMIKQMPLPPNDSVWGALLLACRIHGE-IAANYLFQ 505
+VD+ + G L+ +AFD IK+ + W +L+L GE + A LF+
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS----WSSLILGYAQEGEFVEAMGLFK 302
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/683 (35%), Positives = 373/683 (54%), Gaps = 27/683 (3%)
Query: 8 TEGFYDQLLKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNS 67
T F ++ + CN L S R + + + + + L K+I YT A +LF+
Sbjct: 32 TVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDE 91
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTM-RRSGISSNSYTFPFVLKACASNSLI 126
+ S WN+MI G ++L+ M RS +S + N
Sbjct: 92 MPVRDVVS--WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMV----------NGCF 139
Query: 127 LEGKVVHGD-IIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITA 185
GKV + + + D+ ++V Y + G+ DD K+F +M ++++SWT MI
Sbjct: 140 RSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG 199
Query: 186 YEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLED 245
+Q E+ EAL LF+ + + S S V +A VHG I FL +
Sbjct: 200 LDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE 259
Query: 246 LCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQN 305
+ S++ YA C + +R VFD + W ++L+GY N + +AL +F M
Sbjct: 260 EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR 319
Query: 306 SDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDT 365
+ PN T +++C+ LG+ G++ HG + ++ DA + N+++ MY+ G+++
Sbjct: 320 NSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVND 379
Query: 366 AENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSAC 425
A ++F I ++++ SWN +I G HG G+ A F QM+ +PD ITFT +LSAC
Sbjct: 380 AVSVFIKIF--KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSAC 437
Query: 426 SHAGLIDEGRKCFADMTKL--SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDS 483
SH G +++GRK F M+ + +++HY CMVD+LGR G L EA ++I++M + PN+
Sbjct: 438 SHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEM 497
Query: 484 VWGALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMK 538
VW ALL ACR+H GE AA +F L+ + + +VL+SNIYA++ +W V KLR MK
Sbjct: 498 VWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMK 557
Query: 539 NKG-LKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCAL 597
G +KKP + V+ GK + F + D+ P+ +Y+K+E + ++K GY PD AL
Sbjct: 558 KNGIMKKPGSSWVVIRGKKHE-FFSGDQ--PHCSRIYEKLEFLREKLKELGYAPDYRSAL 614
Query: 598 HDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRK 657
HDVEDE +E ML YHSE+LA+AFG++N + V V KNLRVC DCH+ + IS + R+
Sbjct: 615 HDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGRE 674
Query: 658 IIVRDANRFHHFEGGTCSCNDYW 680
I++RD RFHHF+ GTCSC DYW
Sbjct: 675 IVLRDPIRFHHFKNGTCSCGDYW 697
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/616 (35%), Positives = 337/616 (54%), Gaps = 46/616 (7%)
Query: 106 ISSNSYTFPFVLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTD--- 162
+ N Y L+ C+ E K +H +++TG + DSY + +D
Sbjct: 10 LEHNLYETMSCLQRCSKQE---ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 163 DGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVG 222
VFD D W +MI + +++PE +L+L+Q+ ++ T S+ A
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 223 QLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNS 282
L + +H + D+ NS++ YA GN + A L+FD + + D +SWNS
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNS 186
Query: 283 -------------------------------MLTGYIQNGQASEALLLFDEMQNSDCKPN 311
M++GY+Q EAL LF EMQNSD +P+
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 312 PVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFN 371
V+ +SAC LG+ + G+ H Y+ + +++D+ L ++DMYAKCG+++ A +F
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 372 DIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLI 431
+I +++V +W LI+GY HGHGR+A+ F +M + G+KP+ ITFT++L+ACS+ GL+
Sbjct: 307 NI--KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 432 DEGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLL 490
+EG+ F M + ++KP ++HY C+VD+LGRAG L EA I++MPL PN +WGALL
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 491 ACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKP 545
ACRIH GE L ++P H G +V +NI+A KW + + R MK +G+ K
Sbjct: 425 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 484
Query: 546 AAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHD-VEDED 604
S I F DR +P +++ K M +++ GY+P+L L D V+D++
Sbjct: 485 PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDE 544
Query: 605 REHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDAN 664
RE +++ HSEKLA+ +G++ P ++++ KNLRVC DCH + IS IY+R I++RD
Sbjct: 545 REAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRT 604
Query: 665 RFHHFEGGTCSCNDYW 680
RFHHF G CSC DYW
Sbjct: 605 RFHHFRDGKCSCGDYW 620
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 205/417 (49%), Gaps = 47/417 (11%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNT-------ARSLFNSI 68
L+ C+ L+QIH+ + +GL+ + I K+ ++ +T A+ +F+
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSY-----AITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 69 HNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLILE 128
D+ +FLWN MIR ++ + +L LY M S N+YTFP +LKAC++ S E
Sbjct: 76 --DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEE 133
Query: 129 GKVVHGDIIRTGFLSDSYVQAALVDMYA-------------------------------K 157
+H I + G+ +D Y +L++ YA K
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 193
Query: 158 CGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSV 217
G+ D +F +M+ ++ +SWT MI+ Y QA+ +EAL LF + Q + D+V++ +
Sbjct: 194 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANA 253
Query: 218 ASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDL 277
SA QLG + + + +H Y D + ++ MYA+CG +E+A VF ++K+ +
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 278 ISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRK-FHG 336
+W ++++GY +G EA+ F EMQ KPN +T +++AC+Y G + G+ F+
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 337 YIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMH 393
+ N+K ++D+ + G LD A+ ++ P + N W L+ +H
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM-PLKPNAVIWGALLKACRIH 429
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 232/680 (34%), Positives = 371/680 (54%), Gaps = 16/680 (2%)
Query: 13 DQLLKSCNFLASLR---QIHSSLTTSGLINQA--LHLGAKIIIKYTTYGEPNTARSLFNS 67
++LLK C + LR IH+ L + ++A + +I Y E AR LF+
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGIS-SNSYTFPFVLKACASNSLI 126
+ S W M++ Y N+G E L+L+ +M SG S N + V K+C+++ I
Sbjct: 95 MPERNVVS--WCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 127 LEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY 186
EGK HG ++ G +S +V+ LV MY+ C + +V D++ DL ++ ++ Y
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 187 EQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDL 246
+ +E L + +KT E + +++T +S L D+ A VH + F ++
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 247 CIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNS 306
+++ MY +CG V A+ VFD +++ +++ Y Q+ EAL LF +M
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 307 DCKPNPVTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTA 366
+ PN T IL+++ L + G HG ++ S + + NA+++MYAK G ++ A
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 367 ENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACS 426
F+ + + R++ +WN +I+G HG GR+ALE F +M+ G P+ ITF +L ACS
Sbjct: 393 RKAFSGM--TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 427 HAGLIDEGRKCFAD-MTKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVW 485
H G +++G F M K V+P+++HY C+V +L +AG +A D ++ P+ + W
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 486 GALLLACRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNK 540
LL AC + G+ A Y + P +G +VL+SNI+A S +W V K+R M N+
Sbjct: 511 RTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNR 570
Query: 541 GLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDV 600
G+KK S I F D +P +Y KV+ + +IK GY PD++ A HDV
Sbjct: 571 GVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDV 630
Query: 601 EDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIV 660
++E RE L+YHSEKLAVA+G++ ++ + VTKN+R+C+DCHSA + IS I +R I++
Sbjct: 631 DEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVI 690
Query: 661 RDANRFHHFEGGTCSCNDYW 680
RD+NRFHHF G CSC DYW
Sbjct: 691 RDSNRFHHFLDGQCSCCDYW 710
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 343/586 (58%), Gaps = 18/586 (3%)
Query: 106 ISSNSYTFPFVLKACASNSL--ILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDD 163
+ +N + +K+C S L +L KVV R GF+ D LV Y + G
Sbjct: 30 LDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQ-----LVGCYLRLGHDVC 84
Query: 164 GCKVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQK--TQQEGLLSDSVTIVSVASAV 221
K+FDEM RDLVSW +I+ Y + + + + G + VT +S+ SA
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 222 GQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRDLISWN 281
G + + +HG + LE++ + N+ + Y + G++ + +F+ + ++L+SWN
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 282 SMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHGYIINS 341
+M+ ++QNG A + L F+ + +P+ T L ++ +C +G +L + HG I+
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 342 NMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGYGMHGHGRKALE 401
+ + A++D+Y+K G L+ + +F++I + + +W ++A Y HG GR A++
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEI--TSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 402 FFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADMTK-LSVKPEVKHYACMVDML 460
F M+ G+ PDH+TFT +L+ACSH+GL++EG+ F M+K + P + HY+CMVD+L
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 461 GRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIH-----GEIAANYLFQLEPEHTGYFV 515
GR+G L +A+ +IK+MP+ P+ VWGALL ACR++ G AA LF+LEP +V
Sbjct: 383 GRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV 442
Query: 516 LMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIEYGKDIQGFHTADRVNPYWKEVYK 575
++SNIY+AS W++ ++R MK KGL + + S IE+G I F D +P +++ K
Sbjct: 443 MLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQK 502
Query: 576 KVESMAVEIKMA-GYMPDLSCALHDVEDEDREHMLNYHSEKLAVAFGIMNLTPEAVVQVT 634
K++ + ++K GY LHDV ++ +E M+N HSEK+A+AFG++ ++P + +
Sbjct: 503 KLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIR 562
Query: 635 KNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGGTCSCNDYW 680
KNLR+C DCH + IS I +R+II+RD+ RFHHF G+CSC+DYW
Sbjct: 563 KNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 198/416 (47%), Gaps = 13/416 (3%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTTYGEPNTARSLFNSIHNDKSYS 75
+KSC + R +H + S +G +++ Y G A LF+ + S
Sbjct: 41 VKSCVSIELCRLLHCKVVKSVSYRHGF-IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVS 99
Query: 76 FLWNTMIRAYANNGHCVETLELYSTMRRS--GISSNSYTFPFVLKACASNSLILEGKVVH 133
WN++I Y+ G+ + E+ S M S G N TF ++ AC EG+ +H
Sbjct: 100 --WNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIH 157
Query: 134 GDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAYEQAEKPE 193
G +++ G L + V A ++ Y K G CK+F+++S+++LVSW MI + Q E
Sbjct: 158 GLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAE 217
Query: 194 EALILFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIV 253
+ L F +++ G D T ++V + +G V AQ +HG + F + CI +++
Sbjct: 218 KGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALL 277
Query: 254 AMYARCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPV 313
+Y++ G +E + VF + D ++W +ML Y +G +A+ F+ M + P+ V
Sbjct: 278 DLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHV 337
Query: 314 TALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRN--AVMDMYAKCGDLDTAENMFN 371
T L++AC++ G + G+ + ++ +ID L + ++D+ + G L A +
Sbjct: 338 TFTHLLNACSHSGLVEEGKHYF-ETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIK 396
Query: 372 DIHPSERNVSSWNVLIAG---YGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSA 424
++ P E + W L+ Y G KA E + LE +++ ++I SA
Sbjct: 397 EM-PMEPSSGVWGALLGACRVYKDTQLGTKAAERLFE-LEPRDGRNYVMLSNIYSA 450
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/608 (33%), Positives = 348/608 (57%), Gaps = 62/608 (10%)
Query: 132 VHGDIIRTGFLSDSYVQAALVDMYAKCG----QTDDGCKVFDEMSVRDLVSWTVMITAYE 187
+H I++G + D+ A ++ A D K+F++M R+ SW +I +
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 188 QAEKPEEALI----LFQKTQQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFL 243
++++ ++ALI ++ E + + T SV A + G + + + +HG A+ F
Sbjct: 102 ESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 244 EDLCIQNSIVAMYARCG------------------------------------------- 260
D + +++V MY CG
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 261 --NVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALIL 318
+ + AR++FD M +R ++SWN+M++GY NG +A+ +F EM+ D +PN VT + +
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 319 VSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSER 378
+ A + LGS +LG H Y +S ++ID L +A++DMY+KCG ++ A ++F + P E
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL-PRE- 338
Query: 379 NVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCF 438
NV +W+ +I G+ +HG A++ F +M + GV+P + + ++L+ACSH GL++EGR+ F
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 439 ADMTKL-SVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLACRIHGE 497
+ M + ++P ++HY CMVD+LGR+G L EA + I MP+ P+D +W ALL ACR+ G
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 498 I-----AANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPAAFSVIE 552
+ AN L + P +G +V +SN+YA+ W EV ++R MK K ++K S+I+
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 518
Query: 553 YGKDIQGFHTADRVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDREHMLNYH 612
+ F D +P KE+ + ++ ++++AGY P + L ++E+ED+E++L+YH
Sbjct: 519 IDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYH 578
Query: 613 SEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANRFHHFEGG 672
SEK+A AFG+++ +P +++ KNLR+C DCHS+ + IS +Y+RKI VRD RFHHF+ G
Sbjct: 579 SEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDG 638
Query: 673 TCSCNDYW 680
+CSC DYW
Sbjct: 639 SCSCMDYW 646
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 233/515 (45%), Gaps = 95/515 (18%)
Query: 16 LKSCNFLASLRQIHSSLTTSGLINQALHLGAKIIIKYTT-----YGEPNTARSLFNSIHN 70
+ +C + L QIH+ SG + L A I+++ + + + A +FN +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTL--AAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 87
Query: 71 DKSYSFLWNTMIRAYANNGH---CVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
+S WNT+IR ++ + + Y M + N +TFP VLKACA I
Sbjct: 88 RNCFS--WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDG----------------------- 164
EGK +HG ++ GF D +V + LV MY CG D
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 165 ------------------CK----VFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKT 202
CK +FD+M R +VSW MI+ Y ++A+ +F++
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 203 QQEGLLSDSVTIVSVASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNV 262
++ + + VT+VSV A+ +LG + + +H YA + D + ++++ MY++CG +
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 263 EKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSAC 322
EKA VF+ + + ++I+W++M+ G+ +GQA +A+ F +M+ + +P+ V + L++AC
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
Query: 323 TYLGSRQLGRKFHGYIINSN-MKIDATLRNAVMDMYAKCGDLDTAENMFNDIHPSERNVS 381
++ G + GR++ +++ + ++ ++D+ + G LD AE
Sbjct: 386 SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE-------------- 431
Query: 382 SWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLIDEGRKCFADM 441
EF M +KPD + + ++L AC G ++ G++ A++
Sbjct: 432 -------------------EFILNM---PIKPDDVIWKALLGACRMQGNVEMGKRV-ANI 468
Query: 442 TKLSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQM 476
V + Y + +M G E +M +M
Sbjct: 469 LMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 351/615 (57%), Gaps = 60/615 (9%)
Query: 116 VLKACASNSLILEGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGC---------- 165
+L++C+S S + K++HG ++RT +SD +V + L+ A C DD
Sbjct: 18 LLQSCSSFS---DLKIIHGFLLRTHLISDVFVASRLL---ALC--VDDSTFNKPTNLLGY 69
Query: 166 --KVFDEMSVRDLVSWTVMITAYEQAEKPEEALILFQKTQQEGLLSDSVTIVSVASAVGQ 223
+F ++ +L + ++I + +P +A + + + + D++T + A +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 224 LGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYA-------------------------- 257
+ VL + H + F D+ ++NS+V MYA
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 258 -----RCGNVEKARLVFDMMEKRDLISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNP 312
+CG VE AR +FD M R+L +W+ M+ GY +N +A+ LF+ M+ N
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 313 VTALILVSACTYLGSRQLGRKFHGYIINSNMKIDATLRNAVMDMYAKCGDLDTAENMFND 372
+ ++S+C +LG+ + G + + Y++ S+M ++ L A++DM+ +CGD++ A ++F
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 373 IHPSERNVSSWNVLIAGYGMHGHGRKALEFFSQMLEEGVKPDHITFTSILSACSHAGLID 432
+ E + SW+ +I G +HGH KA+ +FSQM+ G P +TFT++LSACSH GL++
Sbjct: 310 L--PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 433 EGRKCFADMTK-LSVKPEVKHYACMVDMLGRAGCLYEAFDMIKQMPLPPNDSVWGALLLA 491
+G + + +M K ++P ++HY C+VDMLGRAG L EA + I +M + PN + GALL A
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 492 CRIH-----GEIAANYLFQLEPEHTGYFVLMSNIYAASNKWREVGKLREDMKNKGLKKPA 546
C+I+ E N L +++PEH+GY+VL+SNIYA + +W ++ LR+ MK K +KKP
Sbjct: 428 CKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPP 487
Query: 547 AFSVIEYGKDIQGFHTAD-RVNPYWKEVYKKVESMAVEIKMAGYMPDLSCALHDVEDEDR 605
+S+IE I F D + +P ++ +K E + +I++ GY + A DV++E++
Sbjct: 488 GWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEK 547
Query: 606 EHMLNYHSEKLAVAFGIMNLTPEAVVQVTKNLRVCNDCHSAFRFISYIYRRKIIVRDANR 665
E ++ HSEKLA+A+G+M P +++ KNLRVC DCH+ + IS +Y R++IVRD NR
Sbjct: 548 ESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNR 607
Query: 666 FHHFEGGTCSCNDYW 680
FHHF G CSC DYW
Sbjct: 608 FHHFRNGVCSCRDYW 622
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 227/459 (49%), Gaps = 58/459 (12%)
Query: 15 LLKSCNFLASLRQIHSSLTTSGLINQALHLGAKII---IKYTTYGEPNT----ARSLFNS 67
LL+SC+ + L+ IH L + LI+ + ++++ + +T+ +P A +F+
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVF-VASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 68 IHNDKSYSFLWNTMIRAYANNGHCVETLELYSTMRRSGISSNSYTFPFVLKACASNSLIL 127
I N F++N +IR ++ + Y+ M +S I ++ TFPF++KA + +L
Sbjct: 77 IQNPNL--FVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 128 EGKVVHGDIIRTGFLSDSYVQAALVDMYAKCGQTDDGCKVFDEMSVRDLVSWTVMITAY- 186
G+ H I+R GF +D YV+ +LV MYA CG ++F +M RD+VSWT M+ Y
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 187 -----EQA-----EKP--------------------EEALILFQKTQQEGLLSDSVTIVS 216
E A E P E+A+ LF+ ++EG++++ +VS
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 217 VASAVGQLGDVLKAQAVHGYAICNAFLEDLCIQNSIVAMYARCGNVEKARLVFDMMEKRD 276
V S+ LG + + + Y + + +L + ++V M+ RCG++EKA VF+ + + D
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 277 LISWNSMLTGYIQNGQASEALLLFDEMQNSDCKPNPVTALILVSACTYLGSRQLGRKFHG 336
+SW+S++ G +G A +A+ F +M + P VT ++SAC++ G + G +
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE--- 371
Query: 337 YIINSNMKIDATLR------NAVMDMYAKCGDLDTAENMFNDIHPSERNVSSWNVLIAGY 390
I NMK D + ++DM + G L AEN +H + N L+
Sbjct: 372 --IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH-VKPNAPILGALLGAC 428
Query: 391 GMHGHGRKALEFFSQMLEEGVKPDHITFTSILS---ACS 426
++ + A + +++ VKP+H + +LS AC+
Sbjct: 429 KIYKNTEVAERVGNMLIK--VKPEHSGYYVLLSNIYACA 465
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,597,039
Number of Sequences: 539616
Number of extensions: 10228539
Number of successful extensions: 33177
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 24417
Number of HSP's gapped (non-prelim): 2130
length of query: 680
length of database: 191,569,459
effective HSP length: 124
effective length of query: 556
effective length of database: 124,657,075
effective search space: 69309333700
effective search space used: 69309333700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)