BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037258
(704 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 178/292 (60%), Gaps = 14/292 (4%)
Query: 388 RQFAYSEIQKITNNF--ERVLGKGGFGEVYHGSLDDNQQVAVKML------SSSCCFQLL 439
++F+ E+Q ++NF + +LG+GGFG+VY G L D VAVK L FQ
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT- 84
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHM--LNWVERLQI 497
+V+++ HRNL L G+C+ L+Y YMA+G++ L+ + E L+W +R +I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
A+ SA+GL YLH C P I+HRDVK++NILL+E+ +A + DFGL+++ + + AV
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX-HVXXAV 203
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV-ISR-AEDDTTHISQWVNSM 615
GT G++ PEY +EK+DV+ +GV+LLE+ITG+R ++R A DD + WV +
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 616 LAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELK 667
L E + +VD LQGN+ + + +++AL C + ERP M++V+ L+
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 177/292 (60%), Gaps = 14/292 (4%)
Query: 388 RQFAYSEIQKITNNF--ERVLGKGGFGEVYHGSLDDNQQVAVKML------SSSCCFQLL 439
++F+ E+Q ++NF + +LG+GGFG+VY G L D VAVK L FQ
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT- 76
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHM--LNWVERLQI 497
+V+++ HRNL L G+C+ L+Y YMA+G++ L+ + E L+W +R +I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
A+ SA+GL YLH C P I+HRDVK++NILL+E+ +A + DFGL+++ + + AV
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX-HVXXAV 195
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV-ISR-AEDDTTHISQWVNSM 615
G G++ PEY +EK+DV+ +GV+LLE+ITG+R ++R A DD + WV +
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 616 LAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELK 667
L E + +VD LQGN+ + + +++AL C + ERP M++V+ L+
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 165/288 (57%), Gaps = 11/288 (3%)
Query: 394 EIQKITNNFER--VLGKGGFGEVYHGSLDDNQQVAVKML----SSSCCFQLLQVKLLMRV 447
++++ TNNF+ ++G G FG+VY G L D +VA+K S +++ L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--EHMLNWVERLQIAVDSAQGL 505
H +L +LIG+C E N M LIY+YM +G L ++L G ++W +RL+I + +A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YLH I+HRDVKS NILL+E KI DFG+S+ + + V GT GY+D
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
PEY++ L EKSDVYSFGVVL E++ R ++ + ++++W G + IV
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLSLE 673
DP+L S K + A+ C + +S +RP+M DVL +L+ L L+
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 165/288 (57%), Gaps = 11/288 (3%)
Query: 394 EIQKITNNFER--VLGKGGFGEVYHGSLDDNQQVAVKML----SSSCCFQLLQVKLLMRV 447
++++ TNNF+ ++G G FG+VY G L D +VA+K S +++ L
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--EHMLNWVERLQIAVDSAQGL 505
H +L +LIG+C E N M LIY+YM +G L ++L G ++W +RL+I + +A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YLH I+HRDVKS NILL+E KI DFG+S+ + + V GT GY+D
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
PEY++ L EKSDVYSFGVVL E++ R ++ + ++++W G + IV
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLSLE 673
DP+L S K + A+ C + +S +RP+M DVL +L+ L L+
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 156/296 (52%), Gaps = 24/296 (8%)
Query: 390 FAYSEIQKITNNFER--------VLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCF---QL 438
F++ E++ +TNNF+ +G+GGFG VY G ++ N VAVK L++ +L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 73
Query: 439 LQ-----VKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWV 492
Q +K++ + H NL L+G+ +G+++ L+Y YM +G+L D+ L+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
R +IA +A G+ +LH +HRD+KS+NILL+E AKI+DFGL+R +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
+ + + GT Y+ PE + + KSD+YSFGVVLLEIITG P + + +
Sbjct: 191 MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 248
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKE 668
E I + +D + + D+ S +A C ++RP + V L+E
Sbjct: 249 EIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 390 FAYSEIQKITNNFER--------VLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCF---QL 438
F++ E++ +TNNF+ +G+GGFG VY G ++ N VAVK L++ +L
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 73
Query: 439 LQ-----VKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWV 492
Q +K++ + H NL L+G+ +G+++ L+Y YM +G+L D+ L+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
R +IA +A G+ +LH +HRD+KS+NILL+E AKI+DFGL+R +
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
+ + GT Y+ PE + + KSD+YSFGVVLLEIITG P + + +
Sbjct: 191 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 248
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKE 668
E I + +D + + D+ S +A C ++RP + V L+E
Sbjct: 249 EIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 155/296 (52%), Gaps = 24/296 (8%)
Query: 390 FAYSEIQKITNNFER--------VLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCF---QL 438
F++ E++ +TNNF+ +G+GGFG VY G ++ N VAVK L++ +L
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 67
Query: 439 LQ-----VKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWV 492
Q +K++ + H NL L+G+ +G+++ L+Y YM +G+L D+ L+W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
R +IA +A G+ +LH +HRD+KS+NILL+E AKI+DFGL+R +
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
+ + GT Y+ PE + + KSD+YSFGVVLLEIITG P + + +
Sbjct: 185 MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 242
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKE 668
E I + +D + + D+ S +A C ++RP + V L+E
Sbjct: 243 EIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 152/296 (51%), Gaps = 24/296 (8%)
Query: 390 FAYSEIQKITNNF-ERVL-------GKGGFGEVYHGSLDDNQQVAVKMLSSSCCF---QL 438
F++ E++ +TNNF ER + G+GGFG VY G ++ N VAVK L++ +L
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 64
Query: 439 LQ-----VKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWV 492
Q +K+ + H NL L+G+ +G+++ L+Y Y +G+L D+ L+W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
R +IA +A G+ +LH +HRD+KS+NILL+E AKI+DFGL+R +
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
+ + GT Y PE + + KSD+YSFGVVLLEIITG P + + +
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLLLDIKE 239
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKE 668
E I + +D + D+ S +A C ++RP + V L+E
Sbjct: 240 EIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 115/207 (55%), Gaps = 19/207 (9%)
Query: 401 NFERVLGKGGFGEV----YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHR 450
N + +G G FG V +HGS VAVK+L L +V ++ R+ H
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGS-----DVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYL-KGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ +G + N+ ++ EY++ G+L + L K L+ RL +A D A+G+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
PPIVHRD+KS N+L+++K K+ DFGLSR+ + S S AGTP ++ PE
Sbjct: 155 -NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA--SXFLXSKXAAGTPEWMAPEVL 211
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
NEKSDVYSFGV+L E+ T ++P
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 117/207 (56%), Gaps = 19/207 (9%)
Query: 401 NFERVLGKGGFGEV----YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHR 450
N + +G G FG V +HGS VAVK+L L +V ++ R+ H
Sbjct: 40 NIKEKIGAGSFGTVHRAEWHGS-----DVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYL-KGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ +G + N+ ++ EY++ G+L + L K L+ RL +A D A+G+ YLH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
PPIVHR++KS N+L+++K K+ DFGLSR+ + S+ S + AGTP ++ PE
Sbjct: 155 -NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGTPEWMAPEVL 211
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
NEKSDVYSFGV+L E+ T ++P
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 30/222 (13%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKM--------LSSSCCFQLLQVKLLM 445
EI E ++G GGFG+VY + +VAVK +S + + KL
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYR-AFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 446 RVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSA 502
+ H N+ AL G C++ N+ L+ E+ G L++ L GK+ + ++NW AV A
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIA 115
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQ--------AKIADFGLSRIFSIESSDQIS 554
+G+ YLH PI+HRD+KSSNIL+ +K++ KI DFGL+R E
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTK 171
Query: 555 TAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
+ AG ++ PE + ++ SDV+S+GV+L E++TG P
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 29/282 (10%)
Query: 392 YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLL--QVKLLM 445
Y EI+ +G G FG VY G + VAVK+L + FQ +V +L
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 446 RVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
+ H N+ +GY + +N+ ++ ++ +L ++L +E + + IA +AQG+
Sbjct: 88 KTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLH-VQETKFQMFQLIDIARQTAQGM 145
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
+YLH I+HRD+KS+NI L+E L KI DFGL+ + S S Q G+ ++
Sbjct: 146 DYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 566 PEYYVL---NWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIR 622
PE + N + +SDVYS+G+VL E++TG P +HI+ + G R
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY--------SHINNRDQIIFMVG--R 252
Query: 623 NIVDPSLQGNFDNNSAWKAVELALA-CASHTSSERPTMTDVL 663
P L + N KA++ +A C ERP +L
Sbjct: 253 GYASPDLSKLYKNCP--KAMKRLVADCVKKVKEERPLFPQIL 292
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHR 450
EI + + E LG+G FGEV+ G+ + +VA+K L L + +++ ++ H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 64 KLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 122 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEAA 177
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 11/223 (4%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
EI + + + LG G FGEV+ G +++ +VAVK L + S L + L+ + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + +I EYMA G+L +LK + + + + + A+G+ Y+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE- 127
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++N+L++E L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 128 --RKNYIHRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAI 183
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDT-THISQ 610
KSDV+SFG++L EI+T G+ P R D T +SQ
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHR 450
EI + + E LG+G FGEV+ G+ + +VA+K L L + +++ ++ H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 323 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE- 380
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 381 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 436
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 238
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 239 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 352
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 238
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 239 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 352
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKIRH 72
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 73 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 65
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 66 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 125 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 179
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 238
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 239 EKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 298 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 352
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 72
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 73 EKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEA 186
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHR 450
EI + + E LG+G FGEV+ G+ + +VA+K L L + +++ ++ H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 63 KLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 120
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 121 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 176
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 63
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 64 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 123 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 177
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 29/287 (10%)
Query: 384 APKSRQFAYS--EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---L 438
AP + Y EI F + LG G FG V +G VA+KM+ + +
Sbjct: 8 APSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI 67
Query: 439 LQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIA 498
+ K++M + H L L G C + + +I EYMA+G L YL+ + H + L++
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMC 126
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
D + +EYL +HRD+ + N L+N++ K++DFGLSR + ++ + S
Sbjct: 127 KDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEETSSVGSK 182
Query: 559 GTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTT-HISQWVNSML 616
+ PE + + + KSD+++FGV++ EI + G+ P +T HI+Q +
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL---- 238
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
+ P L K + +C + ERPT +L
Sbjct: 239 ------RLYRPHLASE-------KVYTIMYSCWHEKADERPTFKILL 272
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 113/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAF-LQEAQVMKKLRH 239
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 240 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 298
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL R+ IE ++ + A P + PE
Sbjct: 299 ---RMNYVHRDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEA 353
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 72
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 73 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 72
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 73 EKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 72
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 73 EKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHR 450
EI + + E LG+G FGEV+ G+ + +VA+K L L + +++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L E + ++ EYM+ G L +LKG+ L + + +A A G+ Y+
Sbjct: 74 KLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 113/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 72
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G L +LKG+ L + + +A A G+ Y+
Sbjct: 73 EKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 132 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 113/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 72
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM+ G+L +LKG+ L + + +A A G+ Y+
Sbjct: 73 EKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD+ ++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 132 ---RMNYVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 186
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 27/272 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E + + IA +A+G++YLH I+HR
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 132
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E KI DFGL+ + S S ++G+ ++ PE + N +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNN 636
+SDVY+FG+VL E++TG+ P + D + M+ G + P L +N
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQ------IIEMVGRGSL----SPDL-SKVRSN 241
Query: 637 SAWKAVELALACASHTSSERPTMTDVLMELKE 668
+ L C ERP+ +L E++E
Sbjct: 242 CPKRMKRLMAECLKKKRDERPSFPRILAEIEE 273
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 35/290 (12%)
Query: 384 APKSRQFAYS--EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---L 438
AP + Y EI F + LG G FG V +G VA+KM+ + +
Sbjct: 8 APSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI 67
Query: 439 LQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIA 498
+ K++M + H L L G C + + +I EYMA+G L YL+ + H + L++
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMC 126
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTA- 556
D + +EYL +HRD+ + N L+N++ K++DFGLSR + E + + +
Sbjct: 127 KDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF 183
Query: 557 -VAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTT-HISQWVN 613
V +P PE + + + KSD+++FGV++ EI + G+ P +T HI+Q +
Sbjct: 184 PVRWSP----PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL- 238
Query: 614 SMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
+ P L K + +C + ERPT +L
Sbjct: 239 ---------RLYRPHLASE-------KVYTIMYSCWHEKADERPTFKILL 272
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 110/210 (52%), Gaps = 9/210 (4%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHRNLTALIG 457
F + +G G FG V+ G + +VA+K + + + + +++M++ H L L G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
C+E + L++E+M G L YL+ ++ + L + +D +G+ YL C ++
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+ + N L+ E K++DFG++R F ++ ST + PE + + + K
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 578 SDVYSFGVVLLEIIT-GRRPVISRAEDDTT 606
SDV+SFGV++ E+ + G+ P +R+ +
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYENRSNSEVV 217
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 110/210 (52%), Gaps = 9/210 (4%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHRNLTALIG 457
F + +G G FG V+ G + +VA+K + + + + +++M++ H L L G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
C+E + L++E+M G L YL+ ++ + L + +D +G+ YL C ++
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+ + N L+ E K++DFG++R F ++ ST + PE + + + K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 578 SDVYSFGVVLLEIIT-GRRPVISRAEDDTT 606
SDV+SFGV++ E+ + G+ P +R+ +
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSEVV 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 110/210 (52%), Gaps = 9/210 (4%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHRNLTALIG 457
F + +G G FG V+ G + +VA+K + + + + +++M++ H L L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
C+E + L++E+M G L YL+ ++ + L + +D +G+ YL C ++
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+ + N L+ E K++DFG++R F ++ ST + PE + + + K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 578 SDVYSFGVVLLEIIT-GRRPVISRAEDDTT 606
SDV+SFGV++ E+ + G+ P +R+ +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 113/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 69
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM G+L +LKG+ L + + ++ A G+ Y+
Sbjct: 70 EKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 129 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWTAPEA 183
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 110/210 (52%), Gaps = 9/210 (4%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHRNLTALIG 457
F + +G G FG V+ G + +VA+K + + + + +++M++ H L L G
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
C+E + L++E+M G L YL+ ++ + L + +D +G+ YL C ++
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+ + N L+ E K++DFG++R F ++ ST + PE + + + K
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 578 SDVYSFGVVLLEIIT-GRRPVISRAEDDTT 606
SDV+SFGV++ E+ + G+ P +R+ +
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNSEVV 234
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 113/209 (54%), Gaps = 13/209 (6%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLS----SSCCFQLLQVKLLMRVHH 449
EI + + E LG+G FGEV+ G+ + +VA+K L S F L + +++ ++ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAF-LQEAQVMKKLRH 69
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L L E + ++ EYM G+L +LKG+ L + + ++ A G+ Y+
Sbjct: 70 EKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEY 568
+ VHRD++++NIL+ E L K+ADFGL+R+ IE ++ + A P + PE
Sbjct: 129 ---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEA 183
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E+ T GR P
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 130
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E L KI DFGL+ + S S ++G+ ++ PE + N +
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 191 QSDVYAFGIVLYELMTGQLP 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E L KI DFGL+ + S S ++G+ ++ PE + N +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 155
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E L KI DFGL+ + S S ++G+ ++ PE + N +
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 216 QSDVYAFGIVLYELMTGQLP 235
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 26/271 (9%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
EI + + + LG G FGEV+ G +++ +VAVK L + S L + L+ + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I E+MA G+L +LK + + + + + A+G+ Y+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE- 126
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++N+L++E L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 127 --RKNYIHRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAI 182
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPS 628
KS+V+SFG++L EI+T G+ P R D V S L++G P
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNAD-------VMSALSQG----YRMPR 231
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTM 659
++ N + ++ C + ERPT
Sbjct: 232 ME-----NCPDELYDIMKMCWKEKAEERPTF 257
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E L KI DFGL+ + S S ++G+ ++ PE + N +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 217 QSDVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E L KI DFGL+ + S S ++G+ ++ PE + N +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E L KI DFGL+ + S S ++G+ ++ PE + N +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 74 -TAPQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E L KI DFGL+ + S S ++G+ ++ PE + N +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHR 450
EI F + LG G FG V +G VA+KM+ + + + K++M + H
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 64
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L G C + + +I EYMA+G L YL+ + H + L++ D + +EYL
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE- 122
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTA--VAGTPGYLDPE 567
+HRD+ + N L+N++ K++DFGLSR + E + + + V +P PE
Sbjct: 123 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PE 176
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTT-HISQWVNSMLAEGDIRNIV 625
+ + + KSD+++FGV++ EI + G+ P +T HI+Q + +
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------RLY 226
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
P L K + +C + ERPT +L
Sbjct: 227 RPHLASE-------KVYTIMYSCWHEKADERPTFKILL 257
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHR 450
EI F + LG G FG V +G VA+KM+ + + + K++M + H
Sbjct: 11 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 70
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L G C + + +I EYMA+G L YL+ + H + L++ D + +EYL
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE- 128
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTA--VAGTPGYLDPE 567
+HRD+ + N L+N++ K++DFGLSR + E + + + V +P PE
Sbjct: 129 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PE 182
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTT-HISQWVNSMLAEGDIRNIV 625
+ + + KSD+++FGV++ EI + G+ P +T HI+Q + +
Sbjct: 183 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------RLY 232
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
P L K + +C + ERPT +L
Sbjct: 233 RPHLASE-------KVYTIMYSCWHEKADERPTFKILL 263
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 33/278 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHR 450
EI F + LG G FG V +G VA+KM+ + + + K++M + H
Sbjct: 4 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L G C + + +I EYMA+G L YL+ + H + L++ D + +EYL
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLE- 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTA--VAGTPGYLDPE 567
+HRD+ + N L+N++ K++DFGLSR + E + + + V +P PE
Sbjct: 122 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PE 175
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTT-HISQWVNSMLAEGDIRNIV 625
+ + + KSD+++FGV++ EI + G+ P +T HI+Q + +
Sbjct: 176 VLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------RLY 225
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
P L K + +C + ERPT +L
Sbjct: 226 RPHLASE-------KVYTIMYSCWHEKADERPTFKILL 256
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 9/210 (4%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHRNLTALIG 457
F + +G G FG V+ G + +VA+K + + + + +++M++ H L L G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
C+E + L+ E+M G L YL+ ++ + L + +D +G+ YL C ++
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+ + N L+ E K++DFG++R F ++ ST + PE + + + K
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 578 SDVYSFGVVLLEIIT-GRRPVISRAEDDTT 606
SDV+SFGV++ E+ + G+ P +R+ +
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYENRSNSEVV 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 33/271 (12%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHRNLTALIG 457
F + LG G FG V +G VA+KM+ + + + K++M + H L L G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
C + + +I EYMA+G L YL+ + H + L++ D + +EYL +
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLE---SKQFL 122
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTA--VAGTPGYLDPEYYVLNWL 574
HRD+ + N L+N++ K++DFGLSR + E + + + V +P PE + +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKF 178
Query: 575 NEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTT-HISQWVNSMLAEGDIRNIVDPSLQGN 632
+ KSD+++FGV++ EI + G+ P +T HI+Q + + P L
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------RLYRPHLASE 228
Query: 633 FDNNSAWKAVELALACASHTSSERPTMTDVL 663
K + +C + ERPT +L
Sbjct: 229 -------KVYTIMYSCWHEKADERPTFKILL 252
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 130/289 (44%), Gaps = 31/289 (10%)
Query: 382 SFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQL 438
S P S + E+++ + LG G +GEVY G + VAVK L +
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 439 LQVKLLMR-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L+ +M+ + H NL L+G C +I E+M G L YL+ +N V L +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
A + +EYL K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA
Sbjct: 122 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 174
Query: 558 AGTP---GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVN 613
AG + PE N + KSDV++FGV+L EI T G P D + + +
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE--- 228
Query: 614 SMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
L E D R + P K EL AC S+RP+ ++
Sbjct: 229 --LLEKDYR-MERP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 27/272 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E + + IA +A+G++YLH I+HR
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E KI DFGL+ S S ++G+ ++ PE + N +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNN 636
+SDVY+FG+VL E++TG+ P + D + M+ G + P L +N
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQ------IIEMVGRGSL----SPDLS-KVRSN 253
Query: 637 SAWKAVELALACASHTSSERPTMTDVLMELKE 668
+ L C ERP+ +L E++E
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 130/289 (44%), Gaps = 31/289 (10%)
Query: 382 SFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQL 438
S P S + E+++ + LG G +GEVY G + VAVK L +
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 439 LQVKLLMR-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L+ +M+ + H NL L+G C +I E+M G L YL+ +N V L +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
A + +EYL K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA
Sbjct: 122 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAH 174
Query: 558 AGTP---GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVN 613
AG + PE N + KSDV++FGV+L EI T G P D + + +
Sbjct: 175 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE--- 228
Query: 614 SMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
L E D R + P K EL AC S+RP+ ++
Sbjct: 229 --LLEKDYR-MERP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 27/275 (9%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHR 450
EI F + LG G FG V +G VA+KM+ + + + K++M + H
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE 64
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L G C + + +I EYMA+G L YL+ + H + L++ D + +EYL
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE- 122
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
+HRD+ + N L+N++ K++DFGLSR + ++ S + PE +
Sbjct: 123 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLM 179
Query: 571 LNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTT-HISQWVNSMLAEGDIRNIVDPS 628
+ + KSD+++FGV++ EI + G+ P +T HI+Q + + P
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------RLYRPH 229
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
L K + +C + ERPT +L
Sbjct: 230 LASE-------KVYTIMYSCWHEKADERPTFKILL 257
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 130/272 (47%), Gaps = 27/272 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ ++ ++ +L +L E + + IA +A+G++YLH I+HR
Sbjct: 90 T-APQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIHR 144
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E KI DFGL+ S S ++G+ ++ PE + N +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNN 636
+SDVY+FG+VL E++TG+ P + D + M+ G + P L +N
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQ------IIEMVGRGSL----SPDLS-KVRSN 253
Query: 637 SAWKAVELALACASHTSSERPTMTDVLMELKE 668
+ L C ERP+ +L E++E
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 143/306 (46%), Gaps = 50/306 (16%)
Query: 385 PKSR--QFAYSEIQKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVK------------M 429
PKSR A +EI+ +E+ +GKGGFG V+ G L D VA+K M
Sbjct: 9 PKSRLPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 430 LSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML 489
+ FQ +V ++ ++H N+ L Y + N ++ E++ G L L K H +
Sbjct: 64 IEKFQEFQR-EVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLL-DKAHPI 119
Query: 490 NWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILL-----NEKLQAKIADFGLSRI 544
W +L++ +D A G+EY+ PPIVHRD++S NI L N + AK+ADFGLS
Sbjct: 120 KWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-- 176
Query: 545 FSIESSDQISTAVAGTPGYLDPEYYVLNW--LNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ S + + G ++ PE EK+D YSF ++L I+TG P
Sbjct: 177 ---QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF----- 228
Query: 603 DDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
D+ ++ +M+ E +R + N +EL C S +RP + +
Sbjct: 229 DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN-----VIEL---CWSGDPKKRPHFSYI 280
Query: 663 LMELKE 668
+ EL E
Sbjct: 281 VKELSE 286
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 129/286 (45%), Gaps = 31/286 (10%)
Query: 385 PKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQV 441
P S + E+++ + LG G +GEVY G + VAVK L + L+
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 64
Query: 442 KLLMR-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVD 500
+M+ + H NL L+G C +I E+M G L YL+ +N V L +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 501 SAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
+ +EYL K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----XTAHAGA 177
Query: 561 P---GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSML 616
+ PE N + KSDV++FGV+L EI T G P D + + + L
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----L 229
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
E D R + P K EL AC S+RP+ ++
Sbjct: 230 LEKDYR-MERP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 110/210 (52%), Gaps = 9/210 (4%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHRNLTALIG 457
F + +G G FG V+ G + +VA+K + + + + +++M++ H L L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
C+E + L++E+M G L YL+ ++ + L + +D +G+ YL + ++
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLE---EASVI 125
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+ + N L+ E K++DFG++R F ++ ST + PE + + + K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 578 SDVYSFGVVLLEIIT-GRRPVISRAEDDTT 606
SDV+SFGV++ E+ + G+ P +R+ +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 71 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 128
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 129 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAI 184
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 185 NYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 69 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAI 182
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 70 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 127
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 128 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAI 183
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 184 NYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 129/286 (45%), Gaps = 31/286 (10%)
Query: 385 PKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQV 441
P S + E+++ + LG G +GEVY G + VAVK L + L+
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 64
Query: 442 KLLMR-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVD 500
+M+ + H NL L+G C +I E+M G L YL+ +N V L +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 124
Query: 501 SAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
+ +EYL K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGA 177
Query: 561 P---GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSML 616
+ PE N + KSDV++FGV+L EI T G P D + + + L
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----L 229
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
E D R + P K EL AC S+RP+ ++
Sbjct: 230 LEKDYR-MERP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ---LLQVKLLMRVHHR 450
EI + + + LG G FGEV+ G+ + N +VA+K L L + +++ ++ H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L E + ++ EYM G+L +LK + L + +A A G+ Y+
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE- 122
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++S+NIL+ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 123 --RMNYIHRDLRSANILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWTAPEAA 178
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ KSDV+SFG++L E++T GR P
Sbjct: 179 LYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N SFA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 10 NPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 69
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ +++H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 70 PEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 183
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 243
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 244 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 287
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 288 EDRPNFAIILERIEYC 303
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 78 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 135
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 136 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAI 191
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 192 NYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 148
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E L KI DFGL+ S S ++G+ ++ PE + N +
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 209 QSDVYAFGIVLYELMTGQLP 228
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 108/200 (54%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 156
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE--- 576
D+KS+NI L+E L KI DFGL+ S S ++G+ ++ PE + N
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 217 QSDVYAFGIVLYELMTGQLP 236
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 69 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAI 182
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 77 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 134
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 135 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAI 190
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 191 NYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-SSCCFQLLQ-----VKLLMRVHHRNLTALIGYC 459
+G G FG VY G + VAVKML+ ++ Q LQ V +L + H N+ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ ++ +L +L E ++ + IA +AQG++YLH I+HR
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 128
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL---NWLNE 576
D+KS+NI L+E L KI DFGL+ S S ++G+ ++ PE + N +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDVY+FG+VL E++TG+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 69 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 182
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 75 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 132
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAI 188
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 393 SEIQKITNNFERVLGKGGFGEVYHGSLDDNQ-----QVAVKMLSSSCCFQ-----LLQVK 442
+EI ++V+G G FGEVY G L + VA+K L + + L +
Sbjct: 39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAG 98
Query: 443 LLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSA 502
++ + H N+ L G + M +I EYM +G LD++L+ +K+ + ++ + + A
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQLVGMLRGIA 157
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP- 561
G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T+ P
Sbjct: 158 AGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI 214
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ PE SDV+SFG+V+ E++T G RP
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 74 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 131
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 132 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 187
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 75 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 132
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 188
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N SFA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 10 NPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 69
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 70 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 183
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 184 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 243
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 244 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 287
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 288 EDRPNFAIILERIEYC 303
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N SFA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 16 NPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 75
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 76 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 135
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 136 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 189
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 190 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 249
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 250 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 293
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 294 EDRPNFAIILERIEYC 309
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 64 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 122 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 177
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 79 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 136
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 137 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 192
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 130 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----XTAHAGAKFPIKWTAP 182
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 233
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 234 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 130 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAPAGAKFPIKWTAP 182
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 233
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 234 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 142/306 (46%), Gaps = 50/306 (16%)
Query: 385 PKSR--QFAYSEIQKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVK------------M 429
PKSR A +EI+ +E+ +GKGGFG V+ G L D VA+K M
Sbjct: 9 PKSRLPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 430 LSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML 489
+ FQ +V ++ ++H N+ L Y + N ++ E++ G L L K H +
Sbjct: 64 IEKFQEFQR-EVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLL-DKAHPI 119
Query: 490 NWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILL-----NEKLQAKIADFGLSRI 544
W +L++ +D A G+EY+ PPIVHRD++S NI L N + AK+ADFG S
Sbjct: 120 KWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-- 176
Query: 545 FSIESSDQISTAVAGTPGYLDPEYYVLNW--LNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ S + + G ++ PE EK+D YSF ++L I+TG P
Sbjct: 177 ---QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF----- 228
Query: 603 DDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
D+ ++ +M+ E +R + N +EL C S +RP + +
Sbjct: 229 DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN-----VIEL---CWSGDPKKRPHFSYI 280
Query: 663 LMELKE 668
+ EL E
Sbjct: 281 VKELSE 286
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N SFA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 36 NPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 95
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 96 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 155
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 156 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 209
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 210 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 269
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 270 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 313
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 314 EDRPNFAIILERIEYC 329
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAPAGAKFPIKWTAP 183
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 234
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 235 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 181
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 232
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 233 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 72
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 132
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 133 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 185
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 236
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 237 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 51/250 (20%)
Query: 400 NNFERV--LGKGGFGEVYHG------SLDDNQQVAVKMLSSSCCFQLL-----QVKLLMR 446
NN E V +G+G FG V+ + VAVKML + + L+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 447 VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHM------------------ 488
+ N+ L+G C G M L++EYMA G L+++L+ H
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 489 ----LNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR- 543
L+ E+L IA A G+ YL + VHRD+ + N L+ E + KIADFGLSR
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 544 -----IFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPV 597
+ + +D I ++ PE N +SDV+++GVVL EI + G +P
Sbjct: 224 IYSADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277
Query: 598 ISRAEDDTTH 607
A ++ +
Sbjct: 278 YGMAHEEVIY 287
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 135/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N FA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 24 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ +++H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 84 PEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 143
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 197
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 257
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 258 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 301
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 302 EDRPNFAIILERIEYC 317
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 128
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 181
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 232
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 233 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 183
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 234
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 235 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 81
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 142 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 194
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 245
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 246 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 127/286 (44%), Gaps = 31/286 (10%)
Query: 385 PKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQV 441
P S + E+++ + LG G +GEVY G + VAVK L + L+
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 64
Query: 442 KLLMR-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVD 500
+M+ + H NL L+G C +I E+M G L YL+ ++ V L +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 124
Query: 501 SAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
+ +EYL K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG
Sbjct: 125 ISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGA 177
Query: 561 P---GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSML 616
+ PE N + KSDV++FGV+L EI T G P +SQ
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQ------ 225
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
+ +++ + K EL AC S+RP+ ++
Sbjct: 226 ----VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
EI + + E+ LG G FGEV+ + + + +VAVK + S S L + ++ + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I E+MA G+L +LK + + + + A+G+ ++
Sbjct: 71 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE- 128
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 129 --QRNYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAI 184
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L+EI+T GR P
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 142/306 (46%), Gaps = 50/306 (16%)
Query: 385 PKSR--QFAYSEIQKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVK------------M 429
PKSR A +EI+ +E+ +GKGGFG V+ G L D VA+K M
Sbjct: 9 PKSRLPTLADNEIE-----YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 430 LSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML 489
+ FQ +V ++ ++H N+ L Y + N ++ E++ G L L K H +
Sbjct: 64 IEKFQEFQR-EVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLL-DKAHPI 119
Query: 490 NWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILL-----NEKLQAKIADFGLSRI 544
W +L++ +D A G+EY+ PPIVHRD++S NI L N + AK+ADF LS
Sbjct: 120 KWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-- 176
Query: 545 FSIESSDQISTAVAGTPGYLDPEYYVLNW--LNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ S + + G ++ PE EK+D YSF ++L I+TG P
Sbjct: 177 ---QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF----- 228
Query: 603 DDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
D+ ++ +M+ E +R + N +EL C S +RP + +
Sbjct: 229 DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRN-----VIEL---CWSGDPKKRPHFSYI 280
Query: 663 LMELKE 668
+ EL E
Sbjct: 281 VKELSE 286
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 70
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 131 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 183
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 234
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 235 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 131/294 (44%), Gaps = 31/294 (10%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ ++ V L +A + +EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----XTAHAGAKFPIKWTAP 179
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DPSQVYE-----LLEKDYR-ME 230
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLSLEIVRNEG 679
P K EL AC S+RP+ ++ + + +EG
Sbjct: 231 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEG 277
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N FA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 24 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 84 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR 143
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 197
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 257
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 258 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 301
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 302 EDRPNFAIILERIEYC 317
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G FGEVY G + VAVK L + L+ +M+ + H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ ++ V L +A + +EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----XTAHAGAKFPIKWTAP 179
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DPSQVYE-----LLEKDYR-ME 230
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 231 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N FA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 9 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 69 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR 128
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 182
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 242
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 243 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 286
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 287 EDRPNFAIILERIEYC 302
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N FA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 9 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 69 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 128
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 182
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 242
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 243 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 286
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 287 EDRPNFAIILERIEYC 302
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 134/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N FA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 26 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 85
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 86 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 145
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 146 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 199
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 200 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 259
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 260 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 303
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 304 EDRPNFAIILERIEYC 319
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 135/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N SFA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 10 NPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 69
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 70 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 183
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG+++ S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 184 KIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 243
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 244 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 287
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 288 EDRPNFAIILERIEYC 303
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLSSSCCFQ----LLQVKLLMR- 446
+++ + +RV+GKG FG VYHG D Q A+K LS Q L+ LLMR
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 447 VHHRNLTALIGYCIEGNNM-GLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
++H N+ ALIG + + ++ YM G L Q+++ + + + + + A+G+
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP-TVKDLISFGLQVARGM 137
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR------IFSIESSDQISTAVAG 559
EYL + VHRD+ + N +L+E K+ADFGL+R +S++ V
Sbjct: 138 EYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 560 TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAE 618
T E KSDV+SFGV+L E++T G P D TH LA+
Sbjct: 195 TAL----ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTH-------FLAQ 243
Query: 619 GDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLS 671
G R + P + +S ++ ++ C + RPT ++ E+++ +S
Sbjct: 244 G--RRLPQP----EYCPDSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQIVS 287
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
EI + + E+ LG G FGEV+ + + + +VAVK + S S L + ++ + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I E+MA G+L +LK + + + + A+G+ ++
Sbjct: 244 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE- 301
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 302 --QRNYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAI 357
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L+EI+T GR P
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G FGEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 65 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 122
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HR+++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 123 --ERNYIHRNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAI 178
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
E+ + T LG G GEV+ G + + +VAVK L S S L + L+ ++ H+
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I EYM +G+L +LK L + L +A A+G+ ++
Sbjct: 69 RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE- 126
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYY 569
+ +HRD++++NIL+++ L KIADFGL+R+ IE ++ + A P + PE
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDAEXTAREGAKFPIKWTAPEAI 182
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L EI+T GR P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 117/234 (50%), Gaps = 22/234 (9%)
Query: 376 FENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLS 431
FE+ N++ R+FA EI E+V+G G FGEV G L + VA+K L
Sbjct: 16 FEDPNEAV----REFA-KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK 70
Query: 432 SSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKE 486
S + L + ++ + H N+ L G + + +I E+M +G+LD +L+ + +
Sbjct: 71 SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QND 129
Query: 487 HMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFS 546
++ + + A G++YL VHRD+ + NIL+N L K++DFGLSR
Sbjct: 130 GQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
Query: 547 IESSDQISTAVAGTP---GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
++SD T+ G + PE SDV+S+G+V+ E+++ G RP
Sbjct: 187 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 133/314 (42%), Gaps = 46/314 (14%)
Query: 380 NDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKMLSS 432
N FA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 3 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 62
Query: 433 SCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH 487
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 63 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 122
Query: 488 -----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQAKI 536
L ++ L +A D A G +YL H+ +HRD+ + N LL AKI
Sbjct: 123 PSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKI 176
Query: 537 ADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRR 595
DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 177 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYM 236
Query: 596 PVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSE 655
P S++ + + ++V S +DP N + C H +
Sbjct: 237 PYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQPED 280
Query: 656 RPTMTDVLMELKEC 669
RP +L ++ C
Sbjct: 281 RPNFAIILERIEYC 294
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N FA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 27 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 86
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 87 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 146
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 147 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 200
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 201 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 260
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 261 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 304
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 305 EDRPNFAIILERIEYC 320
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N FA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 50 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 109
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
C Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 110 PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 169
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 170 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 223
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 283
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 284 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 327
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 328 EDRPNFAIILERIEYC 343
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ ++ V L +A + +EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 181
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 232
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 233 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ ++ V L +A + +EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 181
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 232
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 233 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ ++ V L +A + +EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 181
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 232
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 233 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ ++ V L +A + +EYL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 129 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 181
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DLSQVYE-----LLEKDYR-ME 232
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 233 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 272
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 332
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HR++ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 333 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 385
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 386 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---IDLSQVYE-----LLEKDYR-ME 436
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 437 RPE-------GCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 314
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ +N V L +A + +EYL
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 374
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HR++ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 375 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 427
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 428 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---IDLSQVYE-----LLEKDYR-ME 478
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 479 RPE-------GCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 13/197 (6%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ--LLQVKLLMRVHHRNLTALIGYCIE 461
+ +GKG FG+V G N+ VAVK + + Q L + ++ ++ H NL L+G +E
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 462 -GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
+ ++ EYMA G+L YL+ + +L L+ ++D + +EYL VHRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 314
Query: 521 VKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDV 580
+ + N+L++E AK++DFGL++ S + D V T PE + KSDV
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTKEAS-STQDTGKLPVKWTA----PEALREKKFSTKSDV 369
Query: 581 YSFGVVLLEIIT-GRRP 596
+SFG++L EI + GR P
Sbjct: 370 WSFGILLWEIYSFGRVP 386
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 405 VLGKGGFGEVYHGSLDDNQQVAV-----KMLSSSCCFQLLQVKLLMRVHHRNLTALIGYC 459
VLGKG FG+ + + +V V + + L +VK++ + H N+ IG
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + I EY+ GTL +K + W +R+ A D A G+ YLH I+HR
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLH---SMNIIHR 132
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIF-----------SIESSDQIST-AVAGTPGYLDPE 567
D+ S N L+ E +ADFGL+R+ S++ D+ V G P ++ PE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 568 YYVLNWLNEKSDVYSFGVVLLEII 591
+EK DV+SFG+VL EII
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 13/197 (6%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ--LLQVKLLMRVHHRNLTALIGYCIE 461
+ +GKG FG+V G N+ VAVK + + Q L + ++ ++ H NL L+G +E
Sbjct: 12 QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 462 -GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
+ ++ EYMA G+L YL+ + +L L+ ++D + +EYL VHRD
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 127
Query: 521 VKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDV 580
+ + N+L++E AK++DFGL++ S + D V T PE + KSDV
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTKEAS-STQDTGKLPVKWTA----PEALREKKFSTKSDV 182
Query: 581 YSFGVVLLEIIT-GRRP 596
+SFG++L EI + GR P
Sbjct: 183 WSFGILLWEIYSFGRVP 199
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ ++ V L +A + +EYL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT----FTAHAGAKFPIKWTAP 179
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---DPSQVYE-----LLEKDYR-ME 230
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 231 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 13/197 (6%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ--LLQVKLLMRVHHRNLTALIGYCIE 461
+ +GKG FG+V G N+ VAVK + + Q L + ++ ++ H NL L+G +E
Sbjct: 27 QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 462 -GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
+ ++ EYMA G+L YL+ + +L L+ ++D + +EYL VHRD
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 142
Query: 521 VKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDV 580
+ + N+L++E AK++DFGL++ S + D V T PE + KSDV
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTKEAS-STQDTGKLPVKWTA----PEALREKKFSTKSDV 197
Query: 581 YSFGVVLLEIIT-GRRP 596
+SFG++L EI + GR P
Sbjct: 198 WSFGILLWEIYSFGRVP 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 108/202 (53%), Gaps = 17/202 (8%)
Query: 404 RVLGKGGFGEVYHGSLD---DN--QQVAVKMLSSSCCFQLL-----QVKLLMRVHHRNLT 453
R LG+G FG+V D DN +QVAVK L + ++++L ++H N+
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 454 ALIGYCIE--GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G C E GN + LI E++ SG+L +YL K ++ +N ++L+ AV +G++YL G
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLP-KNKNKINLKQQLKYAVQICKGMDYL--G 143
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYYV 570
+ VHRD+ + N+L+ + Q KI DFGL++ + +P + PE +
Sbjct: 144 SRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 571 LNWLNEKSDVYSFGVVLLEIIT 592
+ SDV+SFGV L E++T
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 106/197 (53%), Gaps = 13/197 (6%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQ--LLQVKLLMRVHHRNLTALIGYCIE 461
+ +GKG FG+V G N+ VAVK + + Q L + ++ ++ H NL L+G +E
Sbjct: 18 QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 462 -GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
+ ++ EYMA G+L YL+ + +L L+ ++D + +EYL VHRD
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 133
Query: 521 VKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDV 580
+ + N+L++E AK++DFGL++ S + D V T PE + KSDV
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTKEAS-STQDTGKLPVKWTA----PEALREAAFSTKSDV 188
Query: 581 YSFGVVLLEIIT-GRRP 596
+SFG++L EI + GR P
Sbjct: 189 WSFGILLWEIYSFGRVP 205
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA EI+ ERV+G G FGEV G L VA+K L + L
Sbjct: 14 EFA-KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLG 72
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +LK K + ++ + +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK-KNDGQFTVIQLVGMLR 131
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
+ G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 132 GISAGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 188
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+V+ E+++ G RP
Sbjct: 189 IPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 108/202 (53%), Gaps = 17/202 (8%)
Query: 404 RVLGKGGFGEVYHGSLD---DN--QQVAVKMLSSSCCFQLL-----QVKLLMRVHHRNLT 453
R LG+G FG+V D DN +QVAVK L + ++++L ++H N+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 454 ALIGYCIE--GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G C E GN + LI E++ SG+L +YL K ++ +N ++L+ AV +G++YL G
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLP-KNKNKINLKQQLKYAVQICKGMDYL--G 131
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYYV 570
+ VHRD+ + N+L+ + Q KI DFGL++ + +P + PE +
Sbjct: 132 SRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 571 LNWLNEKSDVYSFGVVLLEIIT 592
+ SDV+SFGV L E++T
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 275
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C +I E+M G L YL+ ++ V L +A + +EYL
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HR++ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 336 ---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 388
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV 625
E N + KSDV++FGV+L EI T G P D + + + L E D R +
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG---IDLSQVYE-----LLEKDYR-ME 439
Query: 626 DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
P K EL AC S+RP+ ++
Sbjct: 440 RP-------EGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F R LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI E++ G+L +YL+ KE ++ ++ LQ +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 133
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 134 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 20/232 (8%)
Query: 376 FENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLS 431
FE+ N + R+FA EI E+V+G G FGEV G L + VA+K L
Sbjct: 12 FEDPNQAV----REFA-KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 432 SSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKE 486
+ + L + ++ + H N+ L G + + +I EYM +G+LD +L+ K +
Sbjct: 67 AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KND 125
Query: 487 HMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFS 546
++ + + G++YL VHRD+ + NIL+N L K++DFG+SR+
Sbjct: 126 GRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
Query: 547 IESSDQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ +T P + PE SDV+S+G+V+ E+++ G RP
Sbjct: 183 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
QFA E+ ERV+G G FGEV G L + VA+K L + L
Sbjct: 35 QFA-KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLC 93
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G G + ++ E+M +G LD +L+ K + ++ + +
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR-KHDGQFTVIQLVGMLR 152
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G+ YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+V+ E+++ G RP
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 130/283 (45%), Gaps = 45/283 (15%)
Query: 392 YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKL--LMRVHH 449
Y EI+ E V+G+G FG V + VA+K + S + V+L L RV+H
Sbjct: 7 YKEIE-----VEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNH 60
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKE-------HMLNWVERLQIAVDSA 502
N+ L G C+ N + L+ EY G+L L G + H ++W + +
Sbjct: 61 PNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCS 112
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP 561
QG+ YLH ++HRD+K N+LL KI DFG + ++ G+
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSA 167
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDI 621
++ PE + + +EK DV+S+G++L E+IT R+P D+ + M A +
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF-----DEIGGPA--FRIMWA---V 217
Query: 622 RNIVDPSLQGNFDNNSAWKAVE-LALACASHTSSERPTMTDVL 663
N P L N K +E L C S S+RP+M +++
Sbjct: 218 HNGTRPPLIKNLP-----KPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 406 LGKGGFGEVYHGSLD-DNQQVAVK----MLSSSCCFQLLQ-VKLLMRVHHRNLTALIGYC 459
+G+G FGEV+ G L DN VAVK L + LQ ++L + H N+ LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ E + G +L+ + L LQ+ D+A G+EYL C +HR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG---TP-GYLDPEYYVLNWLN 575
D+ + N L+ EK KI+DFG+SR E +D + A G P + PE +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 576 EKSDVYSFGVVLLEIIT 592
+SDV+SFG++L E +
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 130/283 (45%), Gaps = 45/283 (15%)
Query: 392 YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKL--LMRVHH 449
Y EI+ E V+G+G FG V + VA+K + S + V+L L RV+H
Sbjct: 8 YKEIE-----VEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNH 61
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKE-------HMLNWVERLQIAVDSA 502
N+ L G C+ N + L+ EY G+L L G + H ++W + +
Sbjct: 62 PNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCS 113
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP 561
QG+ YLH ++HRD+K N+LL KI DFG + ++ G+
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN-----KGSA 168
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDI 621
++ PE + + +EK DV+S+G++L E+IT R+P D+ + M A +
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF-----DEIGGPA--FRIMWA---V 218
Query: 622 RNIVDPSLQGNFDNNSAWKAVE-LALACASHTSSERPTMTDVL 663
N P L N K +E L C S S+RP+M +++
Sbjct: 219 HNGTRPPLIKNLP-----KPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 114/231 (49%), Gaps = 27/231 (11%)
Query: 374 MEFENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEV---YHGSLDDN--QQVAVK 428
M FE+R+ + QF ++ F + LGKG FG V + L DN + VAVK
Sbjct: 1 MAFEDRDPT------QFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK 49
Query: 429 MLSSSCCFQLL----QVKLLMRVHHRNLTALIGYCIEGN--NMGLIYEYMASGTLDQYLK 482
L S L ++++L + H N+ G C N+ LI EY+ G+L YL+
Sbjct: 50 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ 109
Query: 483 GKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLS 542
KE ++ ++ LQ +G+EYL G K +HRD+ + NIL+ + + KI DFGL+
Sbjct: 110 KHKER-IDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLT 165
Query: 543 RIFSIESSDQISTAVAGTPGY-LDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ + +P + PE + + SDV+SFGVVL E+ T
Sbjct: 166 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 37 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 154
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 155 GIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 134/314 (42%), Gaps = 38/314 (12%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLSSSCCFQ-----L 438
R+FA EI E V+G G FGEV G L + VA+K L + L
Sbjct: 7 REFA-KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL 65
Query: 439 LQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIA 498
+ ++ + H N+ L G + ++ E+M +G LD +L+ + ++ + +
Sbjct: 66 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGML 124
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A G+ YL + VHRD+ + NIL+N L K++DFGLSR SSD T+
Sbjct: 125 RGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL 181
Query: 559 GTP---GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNS 614
G + PE SD +S+G+V+ E+++ G RP + D +N+
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV------INA 235
Query: 615 MLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECL---- 670
+ E D R P + +L L C + RP V+ L + +
Sbjct: 236 I--EQDYRLPPPPDCPTSLH--------QLMLDCWQKDRNARPRFPQVVSALDKMIRNPA 285
Query: 671 SLEIVRNEGHEKGH 684
SL+IV E H
Sbjct: 286 SLKIVARENGGASH 299
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 114/231 (49%), Gaps = 27/231 (11%)
Query: 374 MEFENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEV---YHGSLDDN--QQVAVK 428
M FE+R+ + QF ++ F + LGKG FG V + L DN + VAVK
Sbjct: 3 MAFEDRDPT------QFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK 51
Query: 429 MLSSSCCFQLL----QVKLLMRVHHRNLTALIGYCIEGN--NMGLIYEYMASGTLDQYLK 482
L S L ++++L + H N+ G C N+ LI EY+ G+L YL+
Sbjct: 52 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ 111
Query: 483 GKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLS 542
KE ++ ++ LQ +G+EYL G K +HRD+ + NIL+ + + KI DFGL+
Sbjct: 112 KHKER-IDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLT 167
Query: 543 RIFSIESSDQISTAVAGTPGY-LDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ + +P + PE + + SDV+SFGVVL E+ T
Sbjct: 168 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 100/197 (50%), Gaps = 18/197 (9%)
Query: 406 LGKGGFGEVYHGSLD-DNQQVAVK----MLSSSCCFQLLQ-VKLLMRVHHRNLTALIGYC 459
+G+G FGEV+ G L DN VAVK L + LQ ++L + H N+ LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ + ++ E + G +L+ + L LQ+ D+A G+EYL C +HR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG---TP-GYLDPEYYVLNWLN 575
D+ + N L+ EK KI+DFG+SR E +D + A G P + PE +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 576 EKSDVYSFGVVLLEIIT 592
+SDV+SFG++L E +
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 8 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 125
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 126 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 37 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 154
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 37 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 154
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 37 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 154
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 37 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 154
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 25 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 83
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 142
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 143 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 46/316 (14%)
Query: 378 NRNDSFAPKSRQFA-YSEIQKITNNFERVLGKGGFGEVYHGSLDDNQ------QVAVKML 430
N N FA K+ + E+ + R LG G FGEVY G + QVAVK L
Sbjct: 24 NPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83
Query: 431 SSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK 485
Q L++ ++ + +H+N+ IG ++ ++ E MA G L +L+ +
Sbjct: 84 PEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 143
Query: 486 EH-----MLNWVERLQIAVDSAQGLEYL---HYGCKPPIVHRDVKSSNILL---NEKLQA 534
L ++ L +A D A G +YL H+ +HRD+ + N LL A
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVA 197
Query: 535 KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-G 593
KI DFG++R S + ++ PE ++ K+D +SFGV+L EI + G
Sbjct: 198 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLG 257
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
P S++ + + ++V S +DP N + C H
Sbjct: 258 YMPYPSKSNQE---VLEFVTS-------GGRMDPP------KNCPGPVYRIMTQCWQHQP 301
Query: 654 SERPTMTDVLMELKEC 669
+RP +L ++ C
Sbjct: 302 EDRPNFAIILERIEYC 317
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 92 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 16/220 (7%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLSSSCCFQ-----L 438
R+FA EI E+V+G G FGEV G L + VA+K L + + L
Sbjct: 5 REFA-KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL 63
Query: 439 LQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIA 498
+ ++ + H N+ L G + + +I EYM +G+LD +L+ K + ++ + +
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGML 122
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
G++YL VHRD+ + NIL+N L K++DFG+SR+ + +T
Sbjct: 123 RGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGG 179
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+V+ E+++ G RP
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--CFQLLQVKLLMR-VHH 449
E+++ + LG G +GEVY G + VAVK L + L+ +M+ + H
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 87
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
NL L+G C ++ EYM G L YL+ + V L +A + +EYL
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE 147
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP---GYLDP 566
K +HRD+ + N L+ E K+ADFGLSR+ + ++ TA AG + P
Sbjct: 148 ---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT----YTAHAGAKFPIKWTAP 200
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
E N + KSDV++FGV+L EI T G P
Sbjct: 201 ESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 402 FERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCC-----FQLLQVKLLMRVHHR 450
+R LG+G FG+V+ D VAVK L + F + +LL + H
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR-EAELLTNLQHE 75
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLK-----------GKKEHMLNWVERLQIAV 499
++ G C+EG+ + +++EYM G L+++L+ G L + L IA
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSD--QISTAV 557
A G+ YL VHRD+ + N L+ E L KI DFG+SR + S+D ++
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGGHT 190
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
++ PE + +SDV+S GVVL EI T G++P
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 35 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 93
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 152
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 153 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 129
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 130 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 135
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 136 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 130
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 131 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 161
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 162 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 128
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 129 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 133
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 134 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 137
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 138 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 130
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 131 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G+++L
Sbjct: 152 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI--STAVAGTPGYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R + D + T ++ E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G+++L
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI--STAVAGTPGYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R + D + T ++ E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G+++L
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI--STAVAGTPGYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R + D + T ++ E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G+++L
Sbjct: 91 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFL- 147
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI--STAVAGTPGYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R + D + T ++ E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 148
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 149 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 148
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 149 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G+++L
Sbjct: 98 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFL- 154
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI--STAVAGTPGYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R + D + T ++ E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G+++L
Sbjct: 94 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI--STAVAGTPGYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R + D + T ++ E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 85 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 141
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G+++L
Sbjct: 94 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI--STAVAGTPGYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R + D + T ++ E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 111 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 37 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 154
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGL+R+ + +T
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK 211
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 92 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 112 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 168
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 25/210 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHR 450
EI + + E+ LG G FGEV+ + + + +VAVK + S S L + ++ + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
L L + + +I E+MA G+L +LK + + + + A+G+ ++
Sbjct: 238 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE- 295
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRI---FSIESSDQISTAVAGTPGYLDPE 567
+ +HRD++++NIL++ L KIADFGL+R+ F I+ + PE
Sbjct: 296 --QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK--------------WTAPE 339
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
KSDV+SFG++L+EI+T GR P
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 91 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 147
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 90 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 146
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSC----CFQLLQVKLLMR-VHHRN 451
+F V+G+G FG VYHG+L DN AVK L+ Q L ++M+ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 452 LTALIGYCI--EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +L+G C+ EG+ + ++ YM G L +++ + H + + + A+G++YL
Sbjct: 88 VLSLLGICLRSEGSPL-VVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYL- 144
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQISTAVAGTP-GYLDPE 567
VHRD+ + N +L+EK K+ADFGL+R ++ E + A P ++ E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
KSDV+SFGV+L E++T P
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 37 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ EYM +G+LD +L+ K + ++ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLR 154
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGL R+ + +T
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK 211
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 37/220 (16%)
Query: 406 LGKGGFGEVY----HGSL--DDNQQVAVKML--SSSCCFQLLQ--VKLLMRVHHRNLTAL 455
LG+G FG+V+ H L D VAVK L +S Q Q +LL + H+++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVER-----------LQIAVDSA 502
G C EG + +++EYM G L+++L+ G +L E L +A A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 503 QGLEY---LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSD--QISTAV 557
G+ Y LH+ VHRD+ + N L+ + L KI DFG+SR I S+D ++
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRT 197
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
++ PE + +SDV+SFGVVL EI T G++P
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 37/220 (16%)
Query: 406 LGKGGFGEVY----HGSL--DDNQQVAVKML--SSSCCFQLLQ--VKLLMRVHHRNLTAL 455
LG+G FG+V+ H L D VAVK L +S Q Q +LL + H+++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVER-----------LQIAVDSA 502
G C EG + +++EYM G L+++L+ G +L E L +A A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 503 QGLEY---LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSD--QISTAV 557
G+ Y LH+ VHRD+ + N L+ + L KI DFG+SR I S+D ++
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRT 191
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
++ PE + +SDV+SFGVVL EI T G++P
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ E ++ ++ LQ +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-IDHIKLLQYTSQICKGMEYL-- 133
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 134 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 37/220 (16%)
Query: 406 LGKGGFGEVY----HGSL--DDNQQVAVKML--SSSCCFQLLQ--VKLLMRVHHRNLTAL 455
LG+G FG+V+ H L D VAVK L +S Q Q +LL + H+++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVER-----------LQIAVDSA 502
G C EG + +++EYM G L+++L+ G +L E L +A A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 503 QGLEY---LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSD--QISTAV 557
G+ Y LH+ VHRD+ + N L+ + L KI DFG+SR I S+D ++
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSR--DIYSTDYYRVGGRT 220
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
++ PE + +SDV+SFGVVL EI T G++P
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLSSSCCFQ-----LLQVKLL 444
EI+ + E+++G G GEV +G L Q VA+K L + + L + ++
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 445 MRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
+ H N+ L G G ++ EYM +G+LD +L+ + ++ + + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQLVGMLRGVGAG 163
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
+ YL VHRD+ + N+L++ L K++DFGLSR+ + +T P +
Sbjct: 164 MRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
PE + SDV+SFGVV+ E++ G RP
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 133/309 (43%), Gaps = 38/309 (12%)
Query: 387 SRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLSSSCCFQ----- 437
S +FA EI E V+G G FGEV G L + VA+K L +
Sbjct: 4 SMEFA-KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREF 62
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ + H N+ L G + ++ E+M +G LD +L+ + ++ + +
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGM 121
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
A G+ YL + VHRD+ + NIL+N L K++DFGLSR SSD T+
Sbjct: 122 LRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 558 AGTP---GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVN 613
G + PE SD +S+G+V+ E+++ G RP + D +N
Sbjct: 179 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV------IN 232
Query: 614 SMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECL--- 670
++ E D R P + +L L C + RP V+ L + +
Sbjct: 233 AI--EQDYRLPPPPDCPTSLH--------QLMLDCWQKDRNARPRFPQVVSALDKMIRNP 282
Query: 671 -SLEIVRNE 678
SL+IV E
Sbjct: 283 ASLKIVARE 291
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 130
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HRD+ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 131 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLSSSCCFQ-----LLQVKLL 444
EI+ + E+++G G GEV +G L Q VA+K L + + L + ++
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 445 MRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
+ H N+ L G G ++ EYM +G+LD +L+ + ++ + + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQFTIMQLVGMLRGVGAG 163
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
+ YL VHRD+ + N+L++ L K++DFGLSR+ + +T P +
Sbjct: 164 MRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
PE + SDV+SFGVV+ E++ G RP
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 45/281 (16%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLL-----QVKLLMRVHH 449
+++ ER+ GKG FGEV+ G + QQV A+K++ + ++ +L +
Sbjct: 22 EELFTKLERI-GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 80
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV---DSAQGLE 506
+T G ++G+ + +I EY+ G+ L+ + QIA + +GL+
Sbjct: 81 SYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP------FDEFQIATMLKEILKGLD 134
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
YLH K +HRD+K++N+LL+E+ K+ADFG++ + + GTP ++ P
Sbjct: 135 YLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAG--QLTDTQIKRNTFVGTPFWMAP 189
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV- 625
E + + K+D++S G+ +E+ G P NS + + ++
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIELAKGEPP----------------NSDMHPMRVLFLIP 233
Query: 626 ---DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
P+L G+F + E AC + S RPT ++L
Sbjct: 234 KNNPPTLVGDFTKSFK----EFIDACLNKDPSFRPTAKELL 270
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 37 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ E M +G+LD +L+ K + ++ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLR 154
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 155 GIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 15/214 (7%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLSSSCCFQ-----LLQVKLL 444
EI E+V+G G FGEV G L + VA+K L + + L + ++
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 445 MRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
+ H N+ L G + + +I EYM +G+LD +L+ K + ++ + + G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSG 122
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
++YL VHRD+ + NIL+N L K++DFG+SR+ + +T P +
Sbjct: 123 MKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 179
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
PE SDV+S+G+V+ E+++ G RP
Sbjct: 180 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 8 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ E M +G+LD +L+ K + ++ + +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLR 125
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 126 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 18/225 (8%)
Query: 394 EIQKITNNFE--RVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--------CFQLLQVK 442
+I+ +FE ++LGKG FG+V+ NQ A+K L C + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 443 LLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSA 502
L + H LT + N+ + EY+ G L +++ H + A +
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEII 129
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPG 562
GL++LH IV+RD+K NILL++ KIADFG+ + + D + GTP
Sbjct: 130 LGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML--GDAKTNEFCGTPD 184
Query: 563 YLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTH 607
Y+ PE + N D +SFGV+L E++ G+ P + E++ H
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 389 QFAYSEIQKITNNFERVLGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-----LL 439
+FA E+ + ++V+G G FGEV G L VA+K L + L
Sbjct: 37 EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+ ++ + H N+ L G + + ++ E M +G+LD +L+ K + ++ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLR 154
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG 559
A G++YL VHRD+ + NIL+N L K++DFGLSR+ + +T
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 560 TP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
P + PE SDV+S+G+VL E+++ G RP
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 34/223 (15%)
Query: 402 FERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCC-----FQLLQVKLLMRVHHR 450
+R LG+G FG+V+ D VAVK L FQ + +LL + H
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR-EAELLTNLQHE 77
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKG--------------KKEHMLNWVERLQ 496
++ G C +G+ + +++EYM G L+++L+ + + L + L
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSD--QIS 554
IA A G+ YL VHRD+ + N L+ L KI DFG+SR + S+D ++
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVG 192
Query: 555 TAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
++ PE + +SDV+SFGV+L EI T G++P
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 404 RVLGKGGFGEVYHGSLDD-NQQVAVKMLSSSC--------CFQLLQVKLLMRVHHRNLTA 454
++LGKG FG+V+ NQ A+K L C + + L + H LT
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ N+ + EY+ G L +++ H + A + GL++LH
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLH---SK 137
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
IV+RD+K NILL++ KIADFG+ + + D + GTP Y+ PE +
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCKENML--GDAKTNXFCGTPDYIAPEILLGQKY 195
Query: 575 NEKSDVYSFGVVLLEIITGRRPVISRAEDDTTH 607
N D +SFGV+L E++ G+ P + E++ H
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDDNQQ----VAVKMLSSSCCFQ-----LLQVKLL 444
EI E+V+G G FGEV G L + VA+K L S + L + ++
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 62
Query: 445 MRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
+ H N+ L G + + +I E+M +G+LD +L+ + + ++ + + A G
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAG 121
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP--- 561
++YL VHR + + NIL+N L K++DFGLSR ++SD T+ G
Sbjct: 122 MKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ PE SDV+S+G+V+ E+++ G RP
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 33/218 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V LD ++ +VAVKML S + L+ +M++ H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E L+ + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IFSIESSDQIS 554
A A+G+EYL +HRD+ + N+L+ E KIADFGL+R I I+ + +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 555 TAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ PE +SDV+SFGV+L EI T
Sbjct: 211 NGRLPV-KWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 16/203 (7%)
Query: 402 FERVLGKGGFGEV---YHGSLDDN--QQVAVKMLSSSCCFQLL----QVKLLMRVHHRNL 452
F + LGKG FG V + L DN + VAVK L S L ++++L + H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 453 TALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
G C N+ LI EY+ G+L YL+ KE ++ ++ LQ +G+EYL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYL-- 131
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYY 569
G K +HR++ + NIL+ + + KI DFGL+++ + +P + PE
Sbjct: 132 GTKR-YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 570 VLNWLNEKSDVYSFGVVLLEIIT 592
+ + SDV+SFGVVL E+ T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 39/259 (15%)
Query: 370 QKVEMEFENRNDSFAPKSRQFAYS---EIQKITNNFERVLGKGGFGEVYHGSLDD----- 421
Q V++ + N+ F R++ Y E + F +VLG G FG+V + +
Sbjct: 14 QMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTG 73
Query: 422 -NQQVAVKML-----SSSCCFQLLQVKLLMRV-HHRNLTALIGYCIEGNNMGLIYEYMAS 474
+ QVAVKML SS + ++K++ ++ H N+ L+G C + LI+EY
Sbjct: 74 VSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 133
Query: 475 GTLDQYLKGKKE---------------------HMLNWVERLQIAVDSAQGLEYLHYGCK 513
G L YL+ K+E ++L + + L A A+G+E+L +
Sbjct: 134 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--- 190
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNW 573
VHRD+ + N+L+ KI DFGL+R +S+ + ++ PE
Sbjct: 191 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 250
Query: 574 LNEKSDVYSFGVVLLEIIT 592
KSDV+S+G++L EI +
Sbjct: 251 YTIKSDVWSYGILLWEIFS 269
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V LD ++ +VAVKML S + L+ +M++ H
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E L+ + +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A A+G+EYL +HRD+ + N+L+ E KIADFGL+R I D
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK 201
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV+L EI T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 402 FERVLGKGGFGEVYHGS-LDDNQQVAVKMLSSSCCFQLLQVK----------LLMRVHHR 450
E+ +G+G F EVY + L D VA+K + F L+ K LL +++H
Sbjct: 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQ---IFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERL--QIAVDSAQGLEYL 508
N+ IE N + ++ E +G L + +K K+ ER + V LE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H ++HRD+K +N+ + K+ D GL R FS S + ++ GTP Y+ PE
Sbjct: 153 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS--SKTTAAHSLVGTPYYMSPER 207
Query: 569 YVLNWLNEKSDVYSFGVVLLEIITGRRP 596
N N KSD++S G +L E+ + P
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V LD ++ +VAVKML S + L+ +M++ H
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E L+ + +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A A+G+EYL +HRD+ + N+L+ E KIADFGL+R I D
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK 197
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV+L EI T
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V LD ++ +VAVKML S + L+ +M++ H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E L+ + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A A+G+EYL +HRD+ + N+L+ E KIADFGL+R I D
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK 208
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV+L EI T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V LD ++ +VAVKML S + L+ +M++ H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E L+ + +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A A+G+EYL +HRD+ + N+L+ E KIADFGL+R I D
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK 193
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV+L EI T
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V LD ++ +VAVKML S + L+ +M++ H
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E L+ + +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A A+G+EYL +HRD+ + N+L+ E KIADFGL+R I D
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK 200
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV+L EI T
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V LD ++ +VAVKML S + L+ +M++ H
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E L+ + +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A A+G+EYL +HRD+ + N+L+ E KIADFGL+R I D
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK 249
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV+L EI T
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V LD ++ +VAVKML S + L+ +M++ H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E L+ + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A A+G+EYL +HRD+ + N+L+ E KIADFGL+R I D
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK 208
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV+L EI T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 41/300 (13%)
Query: 373 EMEFENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML- 430
E E ++ + K RQ+A + + R LGKG FG VY ++ + A+K+L
Sbjct: 14 EEELASKQKNEESKKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 431 -----SSSCCFQLL-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGK 484
+ QL +V++ + H N+ L GY + + LI EY GT+ Y + +
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQ 126
Query: 485 KEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRI 544
K + + A L Y H ++HRD+K N+LL + KIADFG
Sbjct: 127 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG---- 179
Query: 545 FSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+S+ + T + GT YL PE +EK D++S GV+ E + G+ P + +
Sbjct: 180 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
Query: 605 T-THISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
T IS+ ++ F + A +L H S+RP + +VL
Sbjct: 240 TYKRISR------------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V LD ++ +VAVKML S + L+ +M++ H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E L+ + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A A+G+EYL +HRD+ + N+L+ E KIADFGL+R I D
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK 208
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV+L EI T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 15/221 (6%)
Query: 385 PKSRQFAYSEIQKITNNFERV------LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ 437
P RQ + +T E V LG+G +G VY + Q VA+K + Q
Sbjct: 10 PPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ 69
Query: 438 --LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERL 495
+ ++ ++ + ++ G + ++ ++ EY +G++ ++ + + L E
Sbjct: 70 EIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK-TLTEDEIA 128
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
I + +GLEYLH+ K +HRD+K+ NILLN + AK+ADFG++ + + +
Sbjct: 129 TILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--N 183
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
V GTP ++ PE N +D++S G+ +E+ G+ P
Sbjct: 184 XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 401 NFERVLGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-H 448
N + LG+G FG+V +D + VAVKML + ++K+L+ + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 449 HRNLTALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW---------VERL-QI 497
H N+ L+G C + G + +I E+ G L YL+ K+ + + +E L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI-YKDPDYVRKGD 205
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
A P ++ PE +SDV+SFGV+L EI +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 129/300 (43%), Gaps = 41/300 (13%)
Query: 373 EMEFENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML- 430
E E ++ + K RQ+A + + R LGKG FG VY ++ + A+K+L
Sbjct: 5 EEELASKQKNEESKKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLF 59
Query: 431 -----SSSCCFQLL-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGK 484
+ QL +V++ + H N+ L GY + + LI EY GT+ Y + +
Sbjct: 60 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQ 117
Query: 485 KEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRI 544
K + + A L Y H ++HRD+K N+LL + KIADFG
Sbjct: 118 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG---- 170
Query: 545 FSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+S+ + T + GT YL PE +EK D++S GV+ E + G+ P + +
Sbjct: 171 WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 230
Query: 605 T-THISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
T IS+ ++ F + A +L H S+RP + +VL
Sbjct: 231 TYKRISR------------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 272
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 401 NFERVLGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-H 448
N + LG+G FG+V +D + VAVKML + ++K+L+ + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 449 HRNLTALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW---------VERLQI- 497
H N+ L+G C + G + +I E+ G L YL+ K+ + + +E L
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D +
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGD 205
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
A P ++ PE +SDV+SFGV+L EI +
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 14/200 (7%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ--LLQ-----VKLLMRVHHRNLTALI 456
+LGKG F VY S+ +VA+KM+ ++ ++Q VK+ ++ H ++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPI 516
Y + N + L+ E +G +++YLK + + + E G+ YLH I
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQIITGMLYLH---SHGI 133
Query: 517 VHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE 576
+HRD+ SN+LL + KIADFGL+ + + + GTP Y+ PE +
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGL 191
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+SDV+S G + ++ GR P
Sbjct: 192 ESDVWSLGCMFYTLLIGRPP 211
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 401 NFERVLGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-H 448
N + LG+G FG+V +D + VAVKML + ++K+L+ + H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 449 HRNLTALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW------------VERL 495
H N+ L+G C + G + +I E+ G L YL+ K+ + + +E L
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 496 QI-AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS 554
+ A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVR 206
Query: 555 TAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
A P ++ PE +SDV+SFGV+L EI +
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 42/227 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLSS---SCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+GKG +GEV+ G L + VAVK+ SS F+ ++ + + H N+ I +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 463 NN----MGLIYEYMASGTLDQYLKGK--KEHMLNWVERLQIAVDSAQGLEYLH---YGC- 512
N + LI Y G+L +L+ + + H+ L++AV +A GL +LH +G
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA-----LRLAVSAACGLAHLHVEIFGTQ 129
Query: 513 -KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDPEY 568
KP I HRD KS N+L+ LQ IAD GL+ + S + SD + GT Y+ PE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHS-QGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 569 YVLNWLNEK-----------SDVYSFGVVLLEIITGRRPVISRAEDD 604
L+E+ +D+++FG+VL EI RR +++ +D
Sbjct: 189 -----LDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVED 228
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHH 449
+FE R LGKG FG VY +++ + A+K+L + QL +V++ + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ L GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+K N+LL + KIADFG +S+ + A+ GT YL PE
Sbjct: 126 ---SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMI 178
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDIRNIVDPS 628
+EK D++S GV+ E + G+ P + DT IS+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR------------------ 220
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 36/267 (13%)
Query: 406 LGKGGFGEVYHGSLDDNQQ--VAVKMLSSSCCFQLL-----QVKLLMRVHHRNLTALIGY 458
+GKG FGEV+ G +D+ Q VA+K++ + ++ +L + +T G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 459 CIEGNNMGLIYEYMASGT-LDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
++ + +I EY+ G+ LD G L+ + I + +GL+YLH K +
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSEKK---I 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNE 576
HRD+K++N+LL+E + K+ADFG++ + QI GTP ++ PE + +
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQL---TDTQIKRNTFVGTPFWMAPEVIKQSAYDS 183
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNN 636
K+D++S G+ +E+ G P ++ M I P+L+GN+
Sbjct: 184 KADIWSLGITAIELARGEPP------------HSELHPMKVLFLIPKNNPPTLEGNYSKP 231
Query: 637 SAWKAVELALACASHTSSERPTMTDVL 663
E AC + S RPT ++L
Sbjct: 232 LK----EFVEACLNKEPSFRPTAKELL 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 37/283 (13%)
Query: 390 FAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQ--VAVKMLSSSCCFQLL-----QVK 442
F + +++ E++ GKG FGEV+ G +D+ Q VA+K++ + ++
Sbjct: 20 FQSMDPEELFTKLEKI-GKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 77
Query: 443 LLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGT-LDQYLKGKKEHMLNWVERLQIAVDS 501
+L + +T G ++ + +I EY+ G+ LD G L+ + I +
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREI 133
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS-TAVAGT 560
+GL+YLH K +HRD+K++N+LL+E + K+ADFG++ + QI GT
Sbjct: 134 LKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL---TDTQIKRNTFVGT 187
Query: 561 PGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGD 620
P ++ PE + + K+D++S G+ +E+ G P ++ M
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP------------HSELHPMKVLFL 235
Query: 621 IRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
I P+L+GN+ E AC + S RPT ++L
Sbjct: 236 IPKNNPPTLEGNYSKPLK----EFVEACLNKEPSFRPTAKELL 274
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 36/267 (13%)
Query: 406 LGKGGFGEVYHGSLDDNQQ--VAVKMLSSSCCFQLL-----QVKLLMRVHHRNLTALIGY 458
+GKG FGEV+ G +D+ Q VA+K++ + ++ +L + +T G
Sbjct: 30 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 459 CIEGNNMGLIYEYMASGT-LDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
++ + +I EY+ G+ LD G L+ + I + +GL+YLH K +
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSEKK---I 141
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNE 576
HRD+K++N+LL+E + K+ADFG++ + QI GTP ++ PE + +
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIKQSAYDS 198
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNN 636
K+D++S G+ +E+ G P ++ M I P+L+GN+
Sbjct: 199 KADIWSLGITAIELARGEPP------------HSELHPMKVLFLIPKNNPPTLEGNYSKP 246
Query: 637 SAWKAVELALACASHTSSERPTMTDVL 663
E AC + S RPT ++L
Sbjct: 247 LK----EFVEACLNKEPSFRPTAKELL 269
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 36/267 (13%)
Query: 406 LGKGGFGEVYHGSLDDNQQ--VAVKMLSSSCCFQLL-----QVKLLMRVHHRNLTALIGY 458
+GKG FGEV+ G +D+ Q VA+K++ + ++ +L + +T G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 459 CIEGNNMGLIYEYMASGT-LDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
++ + +I EY+ G+ LD G L+ + I + +GL+YLH K +
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSEKK---I 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNE 576
HRD+K++N+LL+E + K+ADFG++ + QI GTP ++ PE + +
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQL---TDTQIKRNXFVGTPFWMAPEVIKQSAYDS 183
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNN 636
K+D++S G+ +E+ G P ++ M I P+L+GN+
Sbjct: 184 KADIWSLGITAIELARGEPP------------HSELHPMKVLFLIPKNNPPTLEGNYSKP 231
Query: 637 SAWKAVELALACASHTSSERPTMTDVL 663
E AC + S RPT ++L
Sbjct: 232 LK----EFVEACLNKEPSFRPTAKELL 254
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 389 QFAYSEIQKITNN---FERVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCF--- 436
Q Y+E + N F + LG G FG+V G D +VAVKML S+
Sbjct: 26 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 85
Query: 437 QLLQVKLLMRVH---HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKE------- 486
+ L +L + H H N+ L+G C G + +I EY G L +L+ K E
Sbjct: 86 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKED 145
Query: 487 -HMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIF 545
L + L + AQG+ +L +HRDV + N+LL AKI DFGL+R
Sbjct: 146 GRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 202
Query: 546 SIESSDQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
+ S+ I A P ++ PE +SDV+S+G++L EI +
Sbjct: 203 -MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 30/215 (13%)
Query: 404 RVLGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRN 451
+ LG+G FG+V +D + VAVKML + ++K+L+ + HH N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 452 LTALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW-----------VERL-QIA 498
+ L+G C + G + +I E+ G L YL+ K+ + + +E L +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A
Sbjct: 155 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDA 210
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
P ++ PE +SDV+SFGV+L EI +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 389 QFAYSEIQKITNN---FERVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCF--- 436
Q Y+E + N F + LG G FG+V G D +VAVKML S+
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 437 QLLQVKLLMRVH---HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKE------- 486
+ L +L + H H N+ L+G C G + +I EY G L +L+ K E
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKED 153
Query: 487 -HMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIF 545
L + L + AQG+ +L +HRDV + N+LL AKI DFGL+R
Sbjct: 154 GRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 210
Query: 546 SIESSDQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
+ S+ I A P ++ PE +SDV+S+G++L EI +
Sbjct: 211 -MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 4 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 116
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + T +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTL 169
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 223
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 224 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 34/281 (12%)
Query: 404 RVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSCCF----QLLQVKLLMR-VHHRNLTA 454
R+LG+G FGEVY G +++ VAVK C + + ++M+ + H ++
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
LIG IE +I E G L YL+ K N ++ L + + S Q + + Y
Sbjct: 74 LIGI-IEEEPTWIIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESI 128
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLNW 573
VHRD+ NIL+ K+ DFGLSR IE D +V P ++ PE
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSR--YIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 574 LNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGN 632
SDV+ F V + EI++ G++P D V +L +GD + P L
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQPFFWLENKD-------VIGVLEKGD--RLPKPDLCPP 237
Query: 633 FDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLSLE 673
L C + S+RP T+++ L + +E
Sbjct: 238 V-------LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 271
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 6 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 118
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTL 171
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 225
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 226 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 34/234 (14%)
Query: 389 QFAYSEIQKITNN---FERVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCF--- 436
Q Y+E + N F + LG G FG+V G D +VAVKML S+
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 437 QLLQVKLLMRVH---HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-------- 485
+ L +L + H H N+ L+G C G + +I EY G L +L+ K+
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSY 153
Query: 486 ------EHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADF 539
E L+ + L + AQG+ +L +HRDV + N+LL AKI DF
Sbjct: 154 NPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 210
Query: 540 GLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
GL+R + S+ I A P ++ PE +SDV+S+G++L EI +
Sbjct: 211 GLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 140/333 (42%), Gaps = 51/333 (15%)
Query: 362 RRRNKRVGQ-----KVEMEFENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYH 416
+R N R+G V E+ + D + P + A +KIT R LG+G FG VY
Sbjct: 11 KRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAR---EKIT--MSRELGQGSFGMVYE 65
Query: 417 GSL------DDNQQVAVKMLSSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNM 465
G + +VA+K ++ + + L + ++ + ++ L+G +G
Sbjct: 66 GVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 125
Query: 466 GLIYEYMASGTLDQYLKGKKEHMLN--------WVERLQIAVDSAQGLEYLHYGCKPPIV 517
+I E M G L YL+ + M N + +Q+A + A G+ YL+ V
Sbjct: 126 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFV 182
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG--TPGYLDPEYYVLNWLN 575
HRD+ + N ++ E KI DFG++R I +D G ++ PE
Sbjct: 183 HRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 240
Query: 576 EKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDN 635
SDV+SFGVVL EI T AE +S E +R +++ L DN
Sbjct: 241 TYSDVWSFGVVLWEIAT-------LAEQPYQGLSN-------EQVLRFVMEGGLLDKPDN 286
Query: 636 NSAWKAVELALACASHTSSERPTMTDVLMELKE 668
EL C + RP+ +++ +KE
Sbjct: 287 CPD-MLFELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 133/312 (42%), Gaps = 53/312 (16%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQLL 439
+ +Q EI F LG+ FG+VY G L + Q VA+K L L
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 440 Q-----VKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH------- 487
+ L R+ H N+ L+G + + +I+ Y + G L ++L + H
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 488 -------MLNWVERLQIAVDSAQGLEYL--HYGCKPPIVHRDVKSSNILLNEKLQAKIAD 538
L + + + A G+EYL H+ +VH+D+ + N+L+ +KL KI+D
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISD 188
Query: 539 FGLSR-IFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
GL R +++ + + ++ ++ PE + + SD++S+GVVL E+ + G +P
Sbjct: 189 LGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
Query: 597 VISRAEDDTTHISQWVNSMLAEGDIRN-IVDPSLQGNFDNNSAWKAVELALACASHTSSE 655
+ D + IRN V P D+ AW L + C + S
Sbjct: 248 YCGYSNQDVVEM------------IRNRQVLPCP----DDCPAW-VYALMIECWNEFPSR 290
Query: 656 RPTMTDVLMELK 667
RP D+ L+
Sbjct: 291 RPRFKDIHSRLR 302
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 34/281 (12%)
Query: 404 RVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSCCF----QLLQVKLLMR-VHHRNLTA 454
R+LG+G FGEVY G +++ VAVK C + + ++M+ + H ++
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
LIG IE +I E G L YL+ K N ++ L + + S Q + + Y
Sbjct: 90 LIGI-IEEEPTWIIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESI 144
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLNW 573
VHRD+ NIL+ K+ DFGLSR IE D +V P ++ PE
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSR--YIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 574 LNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGN 632
SDV+ F V + EI++ G++P D V +L +GD + P L
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQPFFWLENKD-------VIGVLEKGD--RLPKPDLCPP 253
Query: 633 FDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLSLE 673
L C + S+RP T+++ L + +E
Sbjct: 254 V-------LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 287
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCI--- 460
+LG GG EV+ L D++ VAVK+L + L R +N AL I
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAV 77
Query: 461 ---------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G ++ EY+ TL + E + +++ D+ Q L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQN 135
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI--STAVAGTPGYLDPEYY 569
I+HRDVK +NIL++ K+ DFG++R + +S + + + AV GT YL PE
Sbjct: 136 G---IIHRDVKPANILISATNAVKVVDFGIARAIA-DSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
+ ++ +SDVYS G VL E++TG P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 405 VLGKGGFGEVYHGSLDDNQQVAVKM--LSSSCCFQ-LLQVKLLMRVHHRNLTALIGYCIE 461
V +G FG V+ L N+ VAVK+ + +Q +V L + H N+ IG
Sbjct: 31 VKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 462 GN----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY------- 510
G ++ LI + G+L +LK ++++W E IA A+GL YLH
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY- 569
G KP I HRD+KS N+LL L A IADFGL+ F S + GT Y+ PE
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 570 -VLNWLNE---KSDVYSFGVVLLEIIT 592
+N+ + + D+Y+ G+VL E+ +
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 4 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 116
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + T +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTL 169
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 223
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 224 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 404 RVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCFQ--LLQVKLLMRVHHRNLTAL 455
RVLG+GGFGEV+ G L +++ K L +Q +++ K+L +VH R + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 456 IGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI--AVDSAQGLEYLHYGC 512
Y E ++ L+ M G + ++ E + E I GLE+LH
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH--- 306
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
+ I++RD+K N+LL++ +I+D GL+ +++ + AGTPG++ PE +
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 573 WLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ D ++ GV L E+I R P +R E
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 34/281 (12%)
Query: 404 RVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSCCF----QLLQVKLLMR-VHHRNLTA 454
R+LG+G FGEVY G +++ VAVK C + + ++M+ + H ++
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
LIG IE +I E G L YL+ K N ++ L + + S Q + + Y
Sbjct: 78 LIGI-IEEEPTWIIMELYPYGELGHYLERNK----NSLKVLTLVLYSLQICKAMAYLESI 132
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLNW 573
VHRD+ NIL+ K+ DFGLSR IE D +V P ++ PE
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSR--YIEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 574 LNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGN 632
SDV+ F V + EI++ G++P D V +L +GD + P L
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQPFFWLENKD-------VIGVLEKGD--RLPKPDLCPP 241
Query: 633 FDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLSLE 673
L C + S+RP T+++ L + +E
Sbjct: 242 V-------LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 6 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 118
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTL 171
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 225
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 226 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVL 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 2 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 114
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + T +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDL 167
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 221
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 222 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 404 RVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCFQ--LLQVKLLMRVHHRNLTAL 455
RVLG+GGFGEV+ G L +++ K L +Q +++ K+L +VH R + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 456 IGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI--AVDSAQGLEYLHYGC 512
Y E ++ L+ M G + ++ E + E I GLE+LH
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH--- 306
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
+ I++RD+K N+LL++ +I+D GL+ +++ + AGTPG++ PE +
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 573 WLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ D ++ GV L E+I R P +R E
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 404 RVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCFQ--LLQVKLLMRVHHRNLTAL 455
RVLG+GGFGEV+ G L +++ K L +Q +++ K+L +VH R + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 456 IGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI--AVDSAQGLEYLHYGC 512
Y E ++ L+ M G + ++ E + E I GLE+LH
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH--- 306
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
+ I++RD+K N+LL++ +I+D GL+ +++ + AGTPG++ PE +
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 573 WLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ D ++ GV L E+I R P +R E
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 125/291 (42%), Gaps = 41/291 (14%)
Query: 382 SFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSC 434
S K RQ+A + + R LGKG FG VY ++ + A+K+L +
Sbjct: 2 SHMSKKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV 56
Query: 435 CFQLL-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVE 493
QL +V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQR 114
Query: 494 RLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
+ A L Y H ++HRD+K N+LL + KIADFG +S+ +
Sbjct: 115 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSR 167
Query: 554 STAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWV 612
T + GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 168 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-- 225
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 226 ----------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 17/210 (8%)
Query: 404 RVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCFQ--LLQVKLLMRVHHRNLTAL 455
RVLG+GGFGEV+ G L +++ K L +Q +++ K+L +VH R + +L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 456 IGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI--AVDSAQGLEYLHYGC 512
Y E ++ L+ M G + ++ E + E I GLE+LH
Sbjct: 251 -AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH--- 306
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
+ I++RD+K N+LL++ +I+D GL+ +++ + AGTPG++ PE +
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE 364
Query: 573 WLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ D ++ GV L E+I R P +R E
Sbjct: 365 EYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCI--- 460
+LG GG EV+ L D++ VAVK+L + L R +N AL I
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAV 77
Query: 461 ---------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G ++ EY+ TL + E + +++ D+ Q L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQN 135
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS--TAVAGTPGYLDPEYY 569
I+HRDVK +NI+++ K+ DFG++R + +S + ++ AV GT YL PE
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAED 603
+ ++ +SDVYS G VL E++TG P + D
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 32/217 (14%)
Query: 404 RVLGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRN 451
+ LG+G FG+V +D + VAVKML + ++K+L+ + HH N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 452 LTALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVER--------------LQ 496
+ L+G C + G + +I E+ G L YL+ K+ + + E +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
+ A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D +
Sbjct: 155 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKG 210
Query: 557 VAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
A P ++ PE +SDV+SFGV+L EI +
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 1 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 113
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + T +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDL 166
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 220
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 221 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 406 LGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNLT 453
LG+G FG+V +D + VAVKML + ++K+L+ + HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 454 ALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW-------------VERLQI-A 498
L+G C + G + +I E+ G L YL+ K+ + + +E L +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDA 201
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
P ++ PE +SDV+SFGV+L EI +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 387 SRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL 439
SRQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 5 SRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 440 -QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIA 498
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYI 117
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + A+
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALC 170
Query: 559 GTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLA 617
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------- 223
Query: 618 EGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 224 -----------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 406 LGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNLT 453
LG+G FG+V +D + VAVKML + ++K+L+ + HH N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 454 ALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW-------------VERLQI-A 498
L+G C + G + +I E+ G L YL+ K+ + + +E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDA 210
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
P ++ PE +SDV+SFGV+L EI +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 406 LGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNLT 453
LG+G FG+V +D + VAVKML + ++K+L+ + HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 454 ALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW-------------VERLQI-A 498
L+G C + G + +I E+ G L YL+ K+ + + +E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX-KDPDXVRKGDA 201
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
P ++ PE +SDV+SFGV+L EI +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 38/274 (13%)
Query: 401 NFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHHR 450
+FE R LGKG FG VY ++ + A+K+L + QL +V++ + H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCH- 125
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+LL + KIADFG +S+ + T + GT YL PE
Sbjct: 126 --SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIE 179
Query: 571 LNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDIRNIVDPSL 629
+EK D++S GV+ E + G+ P + +T IS+ +
Sbjct: 180 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------------------V 221
Query: 630 QGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
+ F + A +L H S+RP + +VL
Sbjct: 222 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 38/282 (13%)
Query: 393 SEIQKITNNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVK 442
S+ Q +FE R LGKG FG VY ++ + A+K+L + QL +V+
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 443 LLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSA 502
+ + H N+ L GY + + LI EY GT+ Y + +K + + A
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELA 122
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPG 562
L Y H ++HRD+K N+LL + KIADFG +S+ + T + GT
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLD 175
Query: 563 YLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDI 621
YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR----------- 224
Query: 622 RNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 225 -------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 2 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 114
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S + T +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTL 167
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
+GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 168 SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 221
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 222 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V +D ++ VAVKML + L+ +M++ H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E + + + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKK 215
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 41/300 (13%)
Query: 373 EMEFENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML- 430
E E ++ + K RQ+A + + R LGKG FG VY ++ + A+K+L
Sbjct: 14 EEELASKQKNEESKKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLF 68
Query: 431 -----SSSCCFQLL-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGK 484
+ QL +V++ + H N+ L GY + + LI EY GT+ Y + +
Sbjct: 69 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQ 126
Query: 485 KEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRI 544
K + + A L Y H ++HRD+K N+LL + KIADFG
Sbjct: 127 KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG---- 179
Query: 545 FSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+S+ + + GT YL PE +EK D++S GV+ E + G+ P + +
Sbjct: 180 WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
Query: 605 T-THISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
T IS+ ++ F + A +L H S+RP + +VL
Sbjct: 240 TYKRISR------------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 38/275 (13%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHH 449
+FE R LGKG FG VY ++ + A+K+L + QL +V++ + H
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ L GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+K N+LL + KIADFG +S+ + T + GT YL PE
Sbjct: 125 ---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 177
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDIRNIVDPS 628
+EK D++S GV+ E + G+ P + +T IS+
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------------------ 219
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 220 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 254
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 38/218 (17%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLSS---SCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+GKG +GEV+ GS + VAVK+ SS F+ ++ + + H N+ I +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 463 NN----MGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH---YGC--K 513
+ + LI Y G+L YL+ L+ V L+I + A GL +LH +G K
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDPEYYV 570
P I HRD+KS NIL+ + Q IAD GL+ + S +S++Q+ GT Y+ PE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS-QSTNQLDVGNNPRVGTKRYMAPEV-- 188
Query: 571 LNWLNE-----------KSDVYSFGVVLLEIITGRRPV 597
L+E + D+++FG+VL E+ RR V
Sbjct: 189 ---LDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 389 QFAYSEIQKITNN---FERVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCF--- 436
Q Y+E + N F + LG G FG+V G D +VAVKML S+
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 437 QLLQVKLLMRVH---HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVE 493
+ L +L + H H N+ L+G C G + +I EY G L +L+ +K +L
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKSRVLETDP 152
Query: 494 RLQIAVDSAQGLEYLHYGCKPP----------IVHRDVKSSNILLNEKLQAKIADFGLSR 543
IA +A + LH+ + +HRDV + N+LL AKI DFGL+R
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 544 IFSIESSDQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
+ S+ I A P ++ PE +SDV+S+G++L EI +
Sbjct: 213 DI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCI--- 460
+LG GG EV+ L D++ VAVK+L + L R +N AL I
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAV 77
Query: 461 ---------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G ++ EY+ TL + E + +++ D+ Q L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQN 135
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS--TAVAGTPGYLDPEYY 569
I+HRDVK +NI+++ K+ DFG++R + +S + ++ AV GT YL PE
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
+ ++ +SDVYS G VL E++TG P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V +D ++ VAVKML + L+ +M++ H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A+G+EYL +HRD+ + N+L+ E KIADFGL+R + + +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ PE +SDV+SFGV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 38/218 (17%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLSS---SCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+GKG +GEV+ GS + VAVK+ SS F+ ++ + + H N+ I +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 463 NN----MGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH---YGC--K 513
+ + LI Y G+L YL+ L+ V L+I + A GL +LH +G K
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDPEYYV 570
P I HRD+KS NIL+ + Q IAD GL+ + S +S++Q+ GT Y+ PE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS-QSTNQLDVGNNPRVGTKRYMAPEV-- 188
Query: 571 LNWLNE-----------KSDVYSFGVVLLEIITGRRPV 597
L+E + D+++FG+VL E+ RR V
Sbjct: 189 ---LDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 38/275 (13%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHH 449
+FE R LGKG FG VY ++ + A+K+L + QL +V++ + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ L GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+K N+LL + KIADFG +S+ + T + GT YL PE
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEMI 178
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDIRNIVDPS 628
+EK D++S GV+ E + G+ P + +T IS+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------------------ 220
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 38/275 (13%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHH 449
+FE R LGKG FG VY ++ + A+K+L + QL +V++ + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ L GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+K N+LL + KIADFG +S+ + A+ GT YL PE
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEMI 178
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDIRNIVDPS 628
+EK D++S GV+ E + G+ P + +T IS+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------------------ 220
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 406 LGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNLT 453
LG+G FG+V +D + VAVKML + ++K+L+ + HH N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 454 ALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW-------------VERLQI-A 498
L+G C + G + +I E+ G L YL+ K+ + + +E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDXVRKGDA 210
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
P ++ PE +SDV+SFGV+L EI +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V +D ++ VAVKML + L+ +M++ H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A+G+EYL +HRD+ + N+L+ E KIADFGL+R + + +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ PE +SDV+SFGV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 106/241 (43%), Gaps = 41/241 (17%)
Query: 389 QFAYSEIQKITNN---FERVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCF--- 436
Q Y+E + N F + LG G FG+V G D +VAVKML S+
Sbjct: 19 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 78
Query: 437 QLLQVKLLMRVH---HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--- 490
+ L +L + H H N+ L+G C G + +I EY G L +L+ K E ML
Sbjct: 79 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSL 138
Query: 491 ------------------WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKL 532
+ L + AQG+ +L +HRDV + N+LL
Sbjct: 139 APGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGH 195
Query: 533 QAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEII 591
AKI DFGL+R + S+ I A P ++ PE +SDV+S+G++L EI
Sbjct: 196 VAKIGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 254
Query: 592 T 592
+
Sbjct: 255 S 255
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 38/275 (13%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHH 449
+FE R LGKG FG VY ++ + A+K+L + QL +V++ + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ L GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+K N+LL + KIADFG +S+ + T + GT YL PE
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEMI 178
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDIRNIVDPS 628
+EK D++S GV+ E + G+ P + +T IS+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------------------ 220
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 6 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY G + Y + +K +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV--YKELQKLSKFDEQRTATY 118
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTL 171
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 225
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 226 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 38/218 (17%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLSS---SCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+GKG +GEV+ GS + VAVK+ SS F+ ++ + + H N+ I +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 463 NN----MGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH---YGC--K 513
+ + LI Y G+L YL+ L+ V L+I + A GL +LH +G K
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIEIFGTQGK 160
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDPEYYV 570
P I HRD+KS NIL+ + Q IAD GL+ + S +S++Q+ GT Y+ PE
Sbjct: 161 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS-QSTNQLDVGNNPRVGTKRYMAPEV-- 217
Query: 571 LNWLNE-----------KSDVYSFGVVLLEIITGRRPV 597
L+E + D+++FG+VL E+ RR V
Sbjct: 218 ---LDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMV 250
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 3 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 57
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 115
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIA+FG +S+ + T +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTL 168
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 222
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 223 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V +D ++ VAVKML + L+ +M++ H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKK 215
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 53/304 (17%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQLLQ-----VK 442
EI F LG+ FG+VY G L + Q VA+K L L +
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 443 LLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH--------------M 488
L R+ H N+ L+G + + +I+ Y + G L ++L + H
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 489 LNWVERLQIAVDSAQGLEYL--HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-IF 545
L + + + A G+EYL H+ +VH+D+ + N+L+ +KL KI+D GL R ++
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVY 179
Query: 546 SIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDD 604
+ + + ++ ++ PE + + SD++S+GVVL E+ + G +P + D
Sbjct: 180 AADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD 238
Query: 605 TTHISQWVNSMLAEGDIRN-IVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
+ IRN V P D+ AW L + C + S RP D+
Sbjct: 239 VVEM------------IRNRQVLPCP----DDCPAW-VYALMIECWNEFPSRRPRFKDIH 281
Query: 664 MELK 667
L+
Sbjct: 282 SRLR 285
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 404 RVLGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQVK-------LLMRVHHRNLTAL 455
R LG G FG V+ S + + A+K+L +L QV+ +L V H + +
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
G + + +I +Y+ G L L+ K + N V + A + LEYLH
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKF-YAAEVCLALEYLH---SKD 126
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
I++RD+K NILL++ KI DFG ++ ++ + GTP Y+ PE N
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPEVVSTKPYN 181
Query: 576 EKSDVYSFGVVLLEIITGRRP 596
+ D +SFG+++ E++ G P
Sbjct: 182 KSIDWWSFGILIYEMLAGYTP 202
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 119/275 (43%), Gaps = 38/275 (13%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHH 449
+FE R LGKG FG VY + + A+K+L + QL +V++ + H
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ L GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+K N+LL + KIADFG +S+ + T + GT YL PE
Sbjct: 123 ---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMI 175
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDIRNIVDPS 628
+EK D++S GV+ E + G+ P + +T IS+
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------------------ 217
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 218 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 252
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 406 LGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNLT 453
LG+G FG+V +D + VAVKML + ++K+L+ + HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 454 ALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW-------------VERLQI-A 498
L+G C + G + +I E+ G L YL+ K+ + + +E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 201
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
P ++ PE +SDV+SFGV+L EI +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 39/221 (17%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLS--------SSCCFQLLQVKLLMRV 447
+ LG+G FG+V +D ++ VAVKML S ++ +K++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK- 99
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVE 493
H+N+ L+G C + + +I EY + G L +YL+ ++ E + + +
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 494 RLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
+ A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 554 STAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 4 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 116
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIA+FG +S+ + T +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTL 169
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 223
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 224 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 39/221 (17%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLS--------SSCCFQLLQVKLLMRV 447
+ LG+G FG+V +D ++ VAVKML S ++ +K++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK- 99
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVE 493
H+N+ L+G C + + +I EY + G L +YL+ ++ E + + +
Sbjct: 100 -HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 494 RLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
+ A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 554 STAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 406 LGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNLT 453
LG+G FG+V +D + VAVKML + ++K+L+ + HH N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 454 ALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW-------------VERLQI-A 498
L+G C + G + +I E+ G L YL+ K+ + + +E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 210
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
P ++ PE +SDV+SFGV+L EI +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 406 LGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNLT 453
LG+G FG+V +D + VAVKML + ++K+L+ + HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 454 ALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW-------------VERLQI-A 498
L+G C + G + +I E+ G L YL+ K+ + + +E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 201
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
P ++ PE +SDV+SFGV+L EI +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 46/309 (14%)
Query: 381 DSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSC 434
D F P + A +KIT R LG+G FG VY G + +VA+K ++ +
Sbjct: 4 DVFVPDEWEVAR---EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 58
Query: 435 CFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML 489
+ L + ++ + ++ L+G +G +I E M G L YL+ + M
Sbjct: 59 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 118
Query: 490 N--------WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGL 541
N + +Q+A + A G+ YL+ VHRD+ + N ++ E KI DFG+
Sbjct: 119 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 175
Query: 542 SRIFSIESSDQISTAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+R I +D G ++ PE SDV+SFGVVL EI T
Sbjct: 176 TR--DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------- 226
Query: 600 RAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTM 659
AE +S E +R +++ L DN EL C + RP+
Sbjct: 227 LAEQPYQGLSN-------EQVLRFVMEGGLLDKPDNCPD-MLFELMRMCWQYNPKMRPSF 278
Query: 660 TDVLMELKE 668
+++ +KE
Sbjct: 279 LEIISSIKE 287
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 389 QFAYSEIQKITNN---FERVLGKGGFGEVYH------GSLDDNQQVAVKMLSSSCCF--- 436
Q Y+E + N F + LG G FG+V G D +VAVKML S+
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 437 QLLQVKLLMRVH---HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHM----- 488
+ L +L + H H N+ L+G C G + +I EY G L +L+ K +
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA 153
Query: 489 -------LNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGL 541
L+ + L + AQG+ +L +HRDV + N+LL AKI DFGL
Sbjct: 154 FAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGL 210
Query: 542 SRIFSIESSDQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
+R + S+ I A P ++ PE +SDV+S+G++L EI +
Sbjct: 211 ARDI-MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 19/212 (8%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ-----LLQVKLLMRVHHRNLTA 454
+ V+G G V ++VA+K ++ C L +++ + + HH N+ +
Sbjct: 18 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 455 LIGYCIEGNNMGLIYEYMASGT-LD--QYLKGKKEHMLNWVERLQIAV---DSAQGLEYL 508
+ + + L+ + ++ G+ LD +++ K EH ++ IA + +GLEYL
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIE---SSDQISTAVAGTPGYLD 565
H K +HRDVK+ NILL E +IADFG+S + + +++ GTP ++
Sbjct: 138 H---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 566 PEYY-VLNWLNEKSDVYSFGVVLLEIITGRRP 596
PE + + K+D++SFG+ +E+ TG P
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 3 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 57
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 115
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXL 168
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 222
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 223 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 43/294 (14%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQ-----LLQVKLL 444
+KIT R LG+G FG VY G + +VA+K ++ + + L + ++
Sbjct: 10 EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 445 MRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVERLQ 496
+ ++ L+G +G +I E M G L YL+ + M N + +Q
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
+A + A G+ YL+ VHRD+ + N ++ E KI DFG++R I +D
Sbjct: 128 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIXETDXXRKG 182
Query: 557 VAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNS 614
G ++ PE SDV+SFGVVL EI T AE +S
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN---- 231
Query: 615 MLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKE 668
E +R +++ L DN +EL C + RP+ +++ +KE
Sbjct: 232 ---EQVLRFVMEGGLLDKPDNCPD-MLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 2 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 114
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTL 167
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 221
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 222 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 38/275 (13%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHH 449
+FE R LGKG FG VY ++ + A+K+L + QL +V++ + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ L GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+K N+LL + KIADFG +S+ + T + GT YL PE
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDIRNIVDPS 628
+EK D++S GV+ E + G+ P + +T IS+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------------------ 220
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 406 LGKGGFGEVYHG---SLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNLT 453
LG+G FG+V +D + VAVKML + ++K+L+ + HH N+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 454 ALIGYCIE-GNNMGLIYEYMASGTLDQYLKGKKEHMLNW-------------VERLQI-A 498
L+G C + G + +I E+ G L YL+ K+ + + +E L +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDA 247
Query: 559 GTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
P ++ PE +SDV+SFGV+L EI +
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 19/212 (8%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ-----LLQVKLLMRVHHRNLTA 454
+ V+G G V ++VA+K ++ C L +++ + + HH N+ +
Sbjct: 13 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 72
Query: 455 LIGYCIEGNNMGLIYEYMASGT-LD--QYLKGKKEHMLNWVERLQIAV---DSAQGLEYL 508
+ + + L+ + ++ G+ LD +++ K EH ++ IA + +GLEYL
Sbjct: 73 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 132
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIE---SSDQISTAVAGTPGYLD 565
H K +HRDVK+ NILL E +IADFG+S + + +++ GTP ++
Sbjct: 133 H---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 566 PEYY-VLNWLNEKSDVYSFGVVLLEIITGRRP 596
PE + + K+D++SFG+ +E+ TG P
Sbjct: 190 PEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 133/315 (42%), Gaps = 46/315 (14%)
Query: 375 EFENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVK 428
E+ + D + P + A +KIT R LG+G FG VY G + +VA+K
Sbjct: 7 EYFSAADVYVPDEWEVAR---EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 429 MLSSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKG 483
++ + + L + ++ + ++ L+G +G +I E M G L YL+
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 484 KKEHMLN--------WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAK 535
+ M N + +Q+A + A G+ YL+ VHRD+ + N ++ E K
Sbjct: 122 LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 178
Query: 536 IADFGLSRIFSIESSDQISTAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITG 593
I DFG++R I +D G ++ PE SDV+SFGVVL EI T
Sbjct: 179 IGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT- 235
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
AE +S E +R +++ L DN EL C +
Sbjct: 236 ------LAEQPYQGLSN-------EQVLRFVMEGGLLDKPDNCPD-MLFELMRMCWQYNP 281
Query: 654 SERPTMTDVLMELKE 668
RP+ +++ +KE
Sbjct: 282 KMRPSFLEIISSIKE 296
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 39/219 (17%)
Query: 406 LGKGGFGEVYHG---SLDDNQ-----QVAVKMLS--------SSCCFQLLQVKLLMRVHH 449
LG+G FG+V +D ++ VAVKML S ++ +K++ + H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 146
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E + + + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKK 261
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 130/309 (42%), Gaps = 46/309 (14%)
Query: 381 DSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSC 434
D + P + A +KIT R LG+G FG VY G + +VA+K ++ +
Sbjct: 7 DVYVPDEWEVAR---EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 61
Query: 435 CFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML 489
+ L + ++ + ++ L+G +G +I E M G L YL+ + M
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 490 N--------WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGL 541
N + +Q+A + A G+ YL+ VHRD+ + N ++ E KI DFG+
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 542 SRIFSIESSDQISTAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+R I +D G ++ PE SDV+SFGVVL EI T
Sbjct: 179 TR--DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------- 229
Query: 600 RAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTM 659
AE +S E +R +++ L DN EL C + RP+
Sbjct: 230 LAEQPYQGLSN-------EQVLRFVMEGGLLDKPDNCPD-MLFELMRMCWQYNPKMRPSF 281
Query: 660 TDVLMELKE 668
+++ +KE
Sbjct: 282 LEIISSIKE 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 133/315 (42%), Gaps = 46/315 (14%)
Query: 375 EFENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVK 428
E+ + D + P + A +KIT R LG+G FG VY G + +VA+K
Sbjct: 7 EYFSAADVYVPDEWEVAR---EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 429 MLSSSCCFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKG 483
++ + + L + ++ + ++ L+G +G +I E M G L YL+
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 484 KKEHMLN--------WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAK 535
+ M N + +Q+A + A G+ YL+ VHRD+ + N ++ E K
Sbjct: 122 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 178
Query: 536 IADFGLSRIFSIESSDQISTAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITG 593
I DFG++R I +D G ++ PE SDV+SFGVVL EI T
Sbjct: 179 IGDFGMTR--DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT- 235
Query: 594 RRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTS 653
AE +S E +R +++ L DN EL C +
Sbjct: 236 ------LAEQPYQGLSN-------EQVLRFVMEGGLLDKPDNCPD-MLFELMRMCWQYNP 281
Query: 654 SERPTMTDVLMELKE 668
RP+ +++ +KE
Sbjct: 282 KMRPSFLEIISSIKE 296
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 4 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATY 116
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXL 169
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 223
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 224 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 31/245 (12%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTAL 455
R +G G FG VY + +++ VA+K +S S + +V+ L ++ H N
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
G + + L+ EY D KK L VE + + QGL YLH
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAVTHGALQGLAYLH---SHN 174
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
++HRDVK+ NILL+E K+ DFG + I + + GTP ++ PE V+ ++
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXFVGTPYWMAPE--VILAMD 226
Query: 576 E-----KSDVYSFGVVLLEIITGRRPVIS-RAEDDTTHISQWVNSMLAEGD----IRNIV 625
E K DV+S G+ +E+ + P+ + A HI+Q + L G RN V
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV 286
Query: 626 DPSLQ 630
D LQ
Sbjct: 287 DSCLQ 291
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V +D ++ VAVKML + L+ +M++ H
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E + + + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYYKK 207
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 133/287 (46%), Gaps = 39/287 (13%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKML---SSSCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+GKG +GEV+ G ++VAVK+ + F+ ++ + + H N+ I I+G
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 463 N----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC-----K 513
+ LI +Y +G+L YLK L+ L++A S GL +LH K
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGK 160
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST---AVAGTPGYLDPEYYV 570
P I HRD+KS NIL+ + IAD GL+ F I ++++ GT Y+ PE V
Sbjct: 161 PAIAHRDLKSKNILVKKNGTCCIADLGLAVKF-ISDTNEVDIPPNTRVGTKRYMPPE--V 217
Query: 571 LNW-LNEK-------SDVYSFGVVLLEIITGRRPVISR-AEDDTTHISQWVNSMLAEGDI 621
L+ LN +D+YSFG++L E+ RR V E+ V S + D+
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPYHDLVPSDPSYEDM 275
Query: 622 RNIV-----DPSLQGNFDNNSAWKAV-ELALACASHTSSERPTMTDV 662
R IV PS + ++ + + +L C +H + R T V
Sbjct: 276 REIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 39/221 (17%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLS--------SSCCFQLLQVKLLMRV 447
+ LG+G FG+V +D ++ VAVKML S ++ +K++ +
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK- 86
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVE 493
H+N+ L+G C + + +I EY + G L +YL+ ++ E + + +
Sbjct: 87 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 494 RLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
+ A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 146 LVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR--DINNIDYY 200
Query: 554 STAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 201 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLSSSCCFQ----LLQVKLLMRV--HH 449
+ LG+G FG+V +D ++ VAVKML + L+ +M++ H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERL 495
+N+ L+G C + + +I EY + G L +YL+ ++ E + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A+G+EYL +HRD+ + N+L+ E +IADFGL+R I + D
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR--DINNIDYYKK 215
Query: 556 AVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 31/245 (12%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTAL 455
R +G G FG VY + +++ VA+K +S S + +V+ L ++ H N
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
G + + L+ EY D KK L VE + + QGL YLH
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAVTHGALQGLAYLH---SHN 135
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
++HRDVK+ NILL+E K+ DFG + I + + GTP ++ PE V+ ++
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXFVGTPYWMAPE--VILAMD 187
Query: 576 E-----KSDVYSFGVVLLEIITGRRPVIS-RAEDDTTHISQWVNSMLAEGD----IRNIV 625
E K DV+S G+ +E+ + P+ + A HI+Q + L G RN V
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV 247
Query: 626 DPSLQ 630
D LQ
Sbjct: 248 DSCLQ 252
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 39/221 (17%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLS--------SSCCFQLLQVKLLMRV 447
+ LG+G FG+V +D ++ VAVKML S ++ +K++ +
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK- 88
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVE 493
H+N+ L+G C + + +I EY + G L +YL+ ++ E + + +
Sbjct: 89 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 494 RLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
+ A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 148 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 202
Query: 554 STAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 203 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMR---------VH 448
++FE++ LG G G V+ S + V + L L++K +R +H
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLH 121
Query: 449 HRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
N ++G+ + + E+M G+LDQ LK + ++ IAV +GL
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGL 179
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YL K I+HRDVK SNIL+N + + K+ DFG+S + D ++ + GT Y+
Sbjct: 180 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMS 233
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV 597
PE + +SD++S G+ L+E+ GR P+
Sbjct: 234 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 130/309 (42%), Gaps = 46/309 (14%)
Query: 381 DSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSC 434
D + P + A +KIT R LG+G FG VY G + +VA+K ++ +
Sbjct: 6 DVYVPDEWEVAR---EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 435 CFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML 489
+ L + ++ + ++ L+G +G +I E M G L YL+ + M
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 490 N--------WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGL 541
N + +Q+A + A G+ YL+ VHRD+ + N ++ E KI DFG+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 542 SRIFSIESSDQISTAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+R I +D G ++ PE SDV+SFGVVL EI T
Sbjct: 178 TR--DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------- 228
Query: 600 RAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTM 659
AE +S E +R +++ L DN EL C + RP+
Sbjct: 229 LAEQPYQGLSN-------EQVLRFVMEGGLLDKPDNCPD-MLFELMRMCWQYNPKMRPSF 280
Query: 660 TDVLMELKE 668
+++ +KE
Sbjct: 281 LEIISSIKE 289
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 123/286 (43%), Gaps = 41/286 (14%)
Query: 387 SRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL 439
SRQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 5 SRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 440 -QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIA 498
+V++ + H N+ L GY + + LI EY GT+ Y + +K +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYI 117
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + +
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLC 170
Query: 559 GTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLA 617
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------- 223
Query: 618 EGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 224 -----------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 130/309 (42%), Gaps = 46/309 (14%)
Query: 381 DSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSC 434
D + P + A +KIT R LG+G FG VY G + +VA+K ++ +
Sbjct: 3 DVYVPDEWEVAR---EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 57
Query: 435 CFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML 489
+ L + ++ + ++ L+G +G +I E M G L YL+ + M
Sbjct: 58 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 117
Query: 490 N--------WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGL 541
N + +Q+A + A G+ YL+ VHRD+ + N ++ E KI DFG+
Sbjct: 118 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 174
Query: 542 SRIFSIESSDQISTAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+R I +D G ++ PE SDV+SFGVVL EI T
Sbjct: 175 TR--DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------- 225
Query: 600 RAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTM 659
AE +S E +R +++ L DN EL C + RP+
Sbjct: 226 LAEQPYQGLSN-------EQVLRFVMEGGLLDKPDNCPD-MLFELMRMCWQYNPKMRPSF 277
Query: 660 TDVLMELKE 668
+++ +KE
Sbjct: 278 LEIISSIKE 286
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMR---------VH 448
++FE++ LG G G V+ S + V + L L++K +R +H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLH 59
Query: 449 HRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
N ++G+ + + E+M G+LDQ LK + ++ IAV +GL
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGL 117
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YL K I+HRDVK SNIL+N + + K+ DFG+S + D ++ + GT Y+
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMS 171
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV 597
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 130/309 (42%), Gaps = 46/309 (14%)
Query: 381 DSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSC 434
D + P + A +KIT R LG+G FG VY G + +VA+K ++ +
Sbjct: 6 DVYVPDEWEVAR---EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 435 CFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML 489
+ L + ++ + ++ L+G +G +I E M G L YL+ + M
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 490 N--------WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGL 541
N + +Q+A + A G+ YL+ VHRD+ + N ++ E KI DFG+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 542 SRIFSIESSDQISTAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+R I +D G ++ PE SDV+SFGVVL EI T
Sbjct: 178 TR--DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------- 228
Query: 600 RAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTM 659
AE +S E +R +++ L DN EL C + RP+
Sbjct: 229 LAEQPYQGLSN-------EQVLRFVMEGGLLDKPDNCPD-MLFELMRMCWQYNPKMRPSF 280
Query: 660 TDVLMELKE 668
+++ +KE
Sbjct: 281 LEIISSIKE 289
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 38/275 (13%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHH 449
+FE R LGKG FG VY ++ + A+K+L + QL +V++ + H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ L GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+K N+LL + KIADFG +S+ + + GT YL PE
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEMI 178
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSMLAEGDIRNIVDPS 628
+EK D++S GV+ E + G+ P + +T IS+
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------------------ 220
Query: 629 LQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 221 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 405 VLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV---HHRNLTALI----G 457
++G+G +G VY GSLD+ + VAVK+ S + + K + RV H N+ I
Sbjct: 20 LIGRGRYGAVYKGSLDE-RPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDER 78
Query: 458 YCIEGN-NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC---- 512
+G L+ EY +G+L +YL H +WV ++A +GL YLH
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYLS---LHTSDWVSSCRLAHSVTRGLAYLHTELPRGD 135
Query: 513 --KPPIVHRDVKSSNILLNEKLQAKIADFGLS------RIFSIESSDQISTAVAGTPGYL 564
KP I HRD+ S N+L+ I+DFGLS R+ D + + GT Y+
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM 195
Query: 565 DPEYY--VLNWLNEKS-----DVYSFGVVLLEII 591
PE +N + +S D+Y+ G++ EI
Sbjct: 196 APEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 130/309 (42%), Gaps = 46/309 (14%)
Query: 381 DSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSC 434
D + P + A +KIT R LG+G FG VY G + +VA+K ++ +
Sbjct: 7 DVYVPDEWEVAR---EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 61
Query: 435 CFQ-----LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML 489
+ L + ++ + ++ L+G +G +I E M G L YL+ + M
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 490 N--------WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGL 541
N + +Q+A + A G+ YL+ VHRD+ + N ++ E KI DFG+
Sbjct: 122 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 542 SRIFSIESSDQISTAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+R I +D G ++ PE SDV+SFGVVL EI T
Sbjct: 179 TR--DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------- 229
Query: 600 RAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTM 659
AE +S E +R +++ L DN EL C + RP+
Sbjct: 230 LAEQPYQGLSN-------EQVLRFVMEGGLLDKPDNCPD-MLFELMRMCWQYNPKMRPSF 281
Query: 660 TDVLMELKE 668
+++ +KE
Sbjct: 282 LEIISSIKE 290
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 116/268 (43%), Gaps = 34/268 (12%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHHRNLTAL 455
R LGKG FG VY ++ + A+K+L + QL +V++ + H N+ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 78 YGYFHDATRVYLILEYAPLGTV--YRELQKLSRFDEQRTATYITELANALSYCH---SKR 132
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
++HRD+K N+LL + KIADFG +S+ + T + GT YL PE +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 576 EKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDN 635
EK D++S GV+ E + G P + +T R I ++ F +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQET---------------YRRI--SRVEFTFPD 231
Query: 636 NSAWKAVELALACASHTSSERPTMTDVL 663
A +L H +S+R T+ +VL
Sbjct: 232 FVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 403 ERVLGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
+RVLGKG FGEV Q+ AVK++S Q L +V+LL ++ H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 455 LIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L + + L+ E G L D+ + K+ + V+ +I G+ Y+H K
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMH---K 144
Query: 514 PPIVHRDVKSSNILLNEKLQ---AKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
IVHRD+K N+LL K + +I DFGLS F E+S ++ + GT Y+ PE
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKI-GTAYYIAPEVLH 201
Query: 571 LNWLNEKSDVYSFGVVLLEIITGRRP 596
+ +EK DV+S GV+L +++G P
Sbjct: 202 GTY-DEKCDVWSTGVILYILLSGCPP 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQ-----LLQVKLL 444
+KIT R LG+G FG VY G + +VA+K ++ + + L + ++
Sbjct: 12 EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 445 MRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVERLQ 496
+ ++ L+G +G +I E M G L YL+ + M N + +Q
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
+A + A G+ YL+ VHRD+ + N ++ E KI DFG++R I +D
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYETDYYRKG 184
Query: 557 VAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNS 614
G ++ PE SDV+SFGVVL EI T AE +S
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN---- 233
Query: 615 MLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKE 668
E +R +++ L DN EL C + RP+ +++ +KE
Sbjct: 234 ---EQVLRFVMEGGLLDKPDNCPD-MLFELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 22/201 (10%)
Query: 406 LGKGGFGEVYHGSLDDNQQ--VAVKMLSSSCCFQLL-----QVKLLMRVHHRNLTALIGY 458
+GKG FGEVY G +D++ + VA+K++ + ++ +L + +T G
Sbjct: 27 IGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 459 CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV---DSAQGLEYLHYGCKPP 515
++ + +I EY+ G+ LK +E IA + +GL+YLH K
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPGP------LEETYIATILREILKGLDYLHSERK-- 137
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
+HRD+K++N+LL+E+ K+ADFG++ + + GTP ++ PE + +
Sbjct: 138 -IHRDIKAANVLLSEQGDVKLADFGVAG--QLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 194
Query: 576 EKSDVYSFGVVLLEIITGRRP 596
K+D++S G+ +E+ G P
Sbjct: 195 FKADIWSLGITAIELAKGEPP 215
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 441 VKLLMRVHHRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
++ L +H N ++G+ + + E+M G+LDQ LK K + ++ I
Sbjct: 62 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSI 121
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
AV +GL YL K I+HRDVK SNIL+N + + K+ DFG+S + D ++ +
Sbjct: 122 AV--LRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSF 173
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV 597
GT Y+ PE + +SD++S G+ L+E+ GR P+
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMR---------VH 448
++FE++ LG G G V+ S + V + L L++K +R +H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLH 59
Query: 449 HRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
N ++G+ + + E+M G+LDQ LK + ++ IAV +GL
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGL 117
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YL K I+HRDVK SNIL+N + + K+ DFG+S + D ++ + GT Y+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMS 171
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV 597
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMR---------VH 448
++FE++ LG G G V+ S + V + L L++K +R +H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLH 59
Query: 449 HRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
N ++G+ + + E+M G+LDQ LK + ++ IAV +GL
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGL 117
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YL K I+HRDVK SNIL+N + + K+ DFG+S + D ++ + GT Y+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMS 171
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV 597
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 107/207 (51%), Gaps = 24/207 (11%)
Query: 403 ERVLGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
+RVLGKG FGEV Q+ AVK++S Q L +V+LL ++ H N+
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 455 LIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L + + L+ E G L D+ + K+ + V+ +I G+ Y+H K
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMH---K 150
Query: 514 PPIVHRDVKSSNILLNEKLQ---AKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
IVHRD+K N+LL K + +I DFGLS F E+S ++ + GT Y+ PE V
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKI-GTAYYIAPE--V 205
Query: 571 LNW-LNEKSDVYSFGVVLLEIITGRRP 596
L+ +EK DV+S GV+L +++G P
Sbjct: 206 LHGTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 122/287 (42%), Gaps = 41/287 (14%)
Query: 386 KSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQL 438
K RQ+A + + R LGKG FG VY ++ + A+K+L + QL
Sbjct: 6 KKRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+V++ + H N+ L GY + + LI EY G + Y + +K +
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV--YKELQKLSKFDEQRTATY 118
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ A L Y H ++HRD+K N+LL + KIADFG +S+ + +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXL 171
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQWVNSML 616
GT YL PE +EK D++S GV+ E + G+ P + +T IS+
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------ 225
Query: 617 AEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
++ F + A +L H S+RP + +VL
Sbjct: 226 ------------VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 260
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 29/215 (13%)
Query: 405 VLGKGGFGEVYHGSLDDNQQ-VAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALIG 457
+LGKG FGEV QQ AVK+++ + L +V+LL ++ H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 458 YCIEGNNMGLIYEYMASGTL-DQYLKGKK--EHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ ++ ++ E G L D+ +K K+ EH + +I G+ Y+H K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH-----DAARIIKQVFSGITYMH---KH 140
Query: 515 PIVHRDVKSSNILLNEK---LQAKIADFGLSRIF--SIESSDQISTAVAGTPGYLDPEYY 569
IVHRD+K NILL K KI DFGLS F + + D+I TA P L Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY- 199
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+EK DV+S GV+L +++G P + E D
Sbjct: 200 -----DEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 125/298 (41%), Gaps = 47/298 (15%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDD------NQQVAVKMLSSSCCF----QLLQVKLLM 445
+KIT R LG+G FG VY G+ D +VAVK ++ S + L +M
Sbjct: 17 EKIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 446 R---VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVER 494
+ HH + L+G +G ++ E MA G L YL+ + N E
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 495 LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS 554
+Q+A + A G+ YL+ VHRD+ + N ++ KI DFG++R I +D
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR 187
Query: 555 TAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
G ++ PE SD++SFGVVL EI T+ Q
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------------TSLAEQPY 233
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECL 670
+ E ++ ++D DN + +L C + RPT +++ LK+ L
Sbjct: 234 QGLSNEQVLKFVMDGGYLDQPDNCPE-RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 449 HRNLTALIGYCIEGNNMG----LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
H NL I G+N+ LI + G+L YLKG +++ W E +A ++G
Sbjct: 68 HENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRG 124
Query: 505 LEYLHY--------GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
L YLH G KP I HRD KS N+LL L A +ADFGL+ F +
Sbjct: 125 LSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHG 184
Query: 557 VAGTPGYLDPEYY--VLNWLNE---KSDVYSFGVVLLEIIT 592
GT Y+ PE +N+ + + D+Y+ G+VL E+++
Sbjct: 185 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 29/215 (13%)
Query: 405 VLGKGGFGEVYHGSLDDNQQ-VAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALIG 457
+LGKG FGEV QQ AVK+++ + L +V+LL ++ H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 458 YCIEGNNMGLIYEYMASGTL-DQYLKGKK--EHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ ++ ++ E G L D+ +K K+ EH + +I G+ Y+H K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH-----DAARIIKQVFSGITYMH---KH 140
Query: 515 PIVHRDVKSSNILLNEK---LQAKIADFGLSRIF--SIESSDQISTAVAGTPGYLDPEYY 569
IVHRD+K NILL K KI DFGLS F + + D+I TA P L Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY- 199
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+EK DV+S GV+L +++G P + E D
Sbjct: 200 -----DEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLS--------SSCCFQLLQVKLLMRV 447
+ LG+G FG+V +D ++ VAVKML S ++ +K++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK- 99
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVE 493
H+N+ L+G C + + +I Y + G L +YL+ ++ E + + +
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 494 RLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
+ A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 554 STAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 29/215 (13%)
Query: 405 VLGKGGFGEVYHGSLDDNQQ-VAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALIG 457
+LGKG FGEV QQ AVK+++ + L +V+LL ++ H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 458 YCIEGNNMGLIYEYMASGTL-DQYLKGKK--EHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ ++ ++ E G L D+ +K K+ EH + +I G+ Y+H K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH-----DAARIIKQVFSGITYMH---KH 140
Query: 515 PIVHRDVKSSNILLNEK---LQAKIADFGLSRIF--SIESSDQISTAVAGTPGYLDPEYY 569
IVHRD+K NILL K KI DFGLS F + + D+I TA P L Y
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY- 199
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+EK DV+S GV+L +++G P + E D
Sbjct: 200 -----DEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMR---------VH 448
++FE++ LG G G V+ S + V + L L++K +R +H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLH 59
Query: 449 HRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
N ++G+ + + E+M G+LDQ LK + ++ IAV +GL
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGL 117
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YL K I+HRDVK SNIL+N + + K+ DFG+S + D ++ + GT Y+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMS 171
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV 597
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMR---------VH 448
++FE++ LG G G V+ S + V + L L++K +R +H
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLH 59
Query: 449 HRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
N ++G+ + + E+M G+LDQ LK + ++ IAV +GL
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGL 117
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YL K I+HRDVK SNIL+N + + K+ DFG+S + D ++ + GT Y+
Sbjct: 118 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMS 171
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV 597
PE + +SD++S G+ L+E+ GR P+
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 403 ERVLGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
+RVLGKG FGEV Q+ AVK++S Q L +V+LL ++ H N+
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 455 LIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L + + L+ E G L D+ + K+ + V+ +I G+ Y+H K
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMH---K 167
Query: 514 PPIVHRDVKSSNILLNEKLQ---AKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
IVHRD+K N+LL K + +I DFGLS F E+S ++ + GT Y+ PE
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKI-GTAYYIAPEVLH 224
Query: 571 LNWLNEKSDVYSFGVVLLEIITGRRP 596
+ +EK DV+S GV+L +++G P
Sbjct: 225 GTY-DEKCDVWSTGVILYILLSGCPP 249
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 124/298 (41%), Gaps = 47/298 (15%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDD------NQQVAVKMLSSSCCF----QLLQVKLLM 445
+KIT R LG+G FG VY G+ D +VAVK ++ S + L +M
Sbjct: 17 EKIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 446 R---VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVER 494
+ HH + L+G +G ++ E MA G L YL+ + N E
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 495 LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS 554
+Q+A + A G+ YL+ VHRD+ + N ++ KI DFG++R I +D
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR 187
Query: 555 TAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
G ++ PE SD++SFGVVL EI T+ Q
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------------TSLAEQPY 233
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECL 670
+ E ++ ++D DN + +L C RPT +++ LK+ L
Sbjct: 234 QGLSNEQVLKFVMDGGYLDQPDNCPE-RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 396 QKITNNFERVLGKGGFGEVYHG-SLDDNQQVAVKM--LSSSCCFQLLQVKLLMRVHHRN- 451
+K FE++ G+G G VY + Q+VA++ L +L+ ++L+ ++N
Sbjct: 19 KKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 452 --LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ L Y + G+ + ++ EY+A G+L + E ++ + + + Q LE+LH
Sbjct: 78 NIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLH 133
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+KS NILL K+ DFG + E S + + + GTP ++ PE
Sbjct: 134 SN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVV 188
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
K D++S G++ +E+I G P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 22/206 (10%)
Query: 403 ERVLGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
+RVLGKG FGEV Q+ AVK++S Q L +V+LL ++ H N+
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 455 LIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L + + L+ E G L D+ + K+ + V+ +I G+ Y+H K
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMH---K 168
Query: 514 PPIVHRDVKSSNILLNEKLQ---AKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
IVHRD+K N+LL K + +I DFGLS F E+S ++ + GT Y+ PE
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKI-GTAYYIAPEVLH 225
Query: 571 LNWLNEKSDVYSFGVVLLEIITGRRP 596
+ +EK DV+S GV+L +++G P
Sbjct: 226 GTY-DEKCDVWSTGVILYILLSGCPP 250
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMR---------VH 448
++FE++ LG G G V+ S + V + L L++K +R +H
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLH 86
Query: 449 HRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
N ++G+ + + E+M G+LDQ LK + ++ IAV +GL
Sbjct: 87 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGL 144
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YL K I+HRDVK SNIL+N + + K+ DFG+S + D ++ + GT Y+
Sbjct: 145 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMS 198
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV 597
PE + +SD++S G+ L+E+ GR P+
Sbjct: 199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 124/298 (41%), Gaps = 47/298 (15%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDD------NQQVAVKMLSSSCCF----QLLQVKLLM 445
+KIT R LG+G FG VY G+ D +VAVK ++ S + L +M
Sbjct: 14 EKIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 71
Query: 446 R---VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVER 494
+ HH + L+G +G ++ E MA G L YL+ + N E
Sbjct: 72 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 495 LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS 554
+Q+A + A G+ YL+ VHRD+ + N ++ KI DFG++R I +D
Sbjct: 130 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIXETDXXR 184
Query: 555 TAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
G ++ PE SD++SFGVVL EI T+ Q
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------------TSLAEQPY 230
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECL 670
+ E ++ ++D DN + +L C RPT +++ LK+ L
Sbjct: 231 QGLSNEQVLKFVMDGGYLDQPDNCPE-RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 287
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 396 QKITNNFERVLGKGGFGEVYHG-SLDDNQQVAVKM--LSSSCCFQLLQVKLLMRVHHRN- 451
+K FE++ G+G G VY + Q+VA++ L +L+ ++L+ ++N
Sbjct: 19 KKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 452 --LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ L Y + G+ + ++ EY+A G+L + E ++ + + + Q LE+LH
Sbjct: 78 NIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLH 133
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+KS NILL K+ DFG + E S + + + GTP ++ PE
Sbjct: 134 SN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVV 188
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
K D++S G++ +E+I G P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 396 QKITNNFERVLGKGGFGEVYHG-SLDDNQQVAVKM--LSSSCCFQLLQVKLLMRVHHRN- 451
+K FE++ G+G G VY + Q+VA++ L +L+ ++L+ ++N
Sbjct: 20 KKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 78
Query: 452 --LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ L Y + G+ + ++ EY+A G+L + E ++ + + + Q LE+LH
Sbjct: 79 NIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLH 134
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+KS NILL K+ DFG + E S + + + GTP ++ PE
Sbjct: 135 SN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVV 189
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
K D++S G++ +E+I G P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQ-----LLQVKLL 444
+KIT R LG+G FG VY G + +VA+K ++ + + L + ++
Sbjct: 12 EKIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 445 MRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVERLQ 496
+ ++ L+G +G +I E M G L YL+ + M N + +Q
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
+A + A G+ YL+ VHRD+ + N + E KI DFG++R I +D
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR--DIYETDYYRKG 184
Query: 557 VAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNS 614
G ++ PE SDV+SFGVVL EI T AE +S
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT-------LAEQPYQGLSN---- 233
Query: 615 MLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKE 668
E +R +++ L DN +EL C + RP+ +++ +KE
Sbjct: 234 ---EQVLRFVMEGGLLDKPDNCPD-MLLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 396 QKITNNFERVLGKGGFGEVYHG-SLDDNQQVAVKM--LSSSCCFQLLQVKLLMRVHHRN- 451
+K FE++ G+G G VY + Q+VA++ L +L+ ++L+ ++N
Sbjct: 19 KKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 452 --LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ L Y + G+ + ++ EY+A G+L + E ++ + + + Q LE+LH
Sbjct: 78 NIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLH 133
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HRD+KS NILL K+ DFG + E S + + + GTP ++ PE
Sbjct: 134 SN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVV 188
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
K D++S G++ +E+I G P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCC----FQLLQVKLLMRVHHRNLTALIGYC 459
+LG GG EV+ L ++ VAVK+L + F L + N A++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 460 IEGNNMG-------LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
G ++ EY+ TL + E + +++ D+ Q L + H
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS--TAVAGTPGYLDPEYYV 570
I+HRDVK +NI+++ K+ DFG++R + +S + ++ AV GT YL PE
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 571 LNWLNEKSDVYSFGVVLLEIITGRRP 596
+ ++ +SDVYS G VL E++TG P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 39/221 (17%)
Query: 404 RVLGKGGFGEVYHG---SLDDNQ-----QVAVKMLS--------SSCCFQLLQVKLLMRV 447
+ LG+G FG+V +D ++ VAVKML S ++ +K++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK- 99
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVE 493
H+N+ L+G C + + +I Y + G L +YL+ ++ E + + +
Sbjct: 100 -HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 494 RLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
+ A+G+EYL +HRD+ + N+L+ E KIADFGL+R I + D
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY 213
Query: 554 STAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
G ++ PE +SDV+SFGV++ EI T
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMR---------VH 448
++FE++ LG G G V+ S + V + L L++K +R +H
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLH 78
Query: 449 HRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
N ++G+ + + E+M G+LDQ LK + ++ IAV +GL
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGL 136
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YL K I+HRDVK SNIL+N + + K+ DFG+S + D ++ + GT Y+
Sbjct: 137 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSYMS 190
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
PE + +SD++S G+ L+E+ GR P+ S
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 391 AYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKM-----LSSSCCFQLLQVKLLM 445
+ E+++ + LG G FG V G VAVKM +S FQ + + +M
Sbjct: 1 GHMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ--EAQTMM 58
Query: 446 RVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
++ H L G C + + ++ EY+++G L YL+ + L + L++ D +G+
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGM 117
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
+L +HRD+ + N L++ L K++DFG++R + ++ S +
Sbjct: 118 AFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSA 173
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
PE + + KSDV++FG+++ E+ + G+ P
Sbjct: 174 PEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP 205
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 403 ERVLGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
+RVLGKG FGEV Q+ AVK++S Q L +V+LL ++ H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 455 LIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L + + L+ E G L D+ + K+ + V+ +I G+ Y H K
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYXH---K 144
Query: 514 PPIVHRDVKSSNILLNEKLQ---AKIADFGLSRIF--SIESSDQISTAVAGTPGYLDPEY 568
IVHRD+K N+LL K + +I DFGLS F S + D+I TA P L Y
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTY 204
Query: 569 YVLNWLNEKSDVYSFGVVLLEIITGRRP 596
+EK DV+S GV+L +++G P
Sbjct: 205 ------DEKCDVWSTGVILYILLSGCPP 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 124/298 (41%), Gaps = 47/298 (15%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDD------NQQVAVKMLSSSCCF----QLLQVKLLM 445
+KIT R LG+G FG VY G+ D +VAVK ++ S + L +M
Sbjct: 17 EKIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 446 R---VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVER 494
+ HH + L+G +G ++ E MA G L YL+ + N E
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 495 LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS 554
+Q+A + A G+ YL+ VHRD+ + N ++ KI DFG++R I +D
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR 187
Query: 555 TAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
G ++ PE SD++SFGVVL EI T+ Q
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------------TSLAEQPY 233
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECL 670
+ E ++ ++D DN + +L C RPT +++ LK+ L
Sbjct: 234 QGLSNEQVLKFVMDGGYLDQPDNCPE-RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMR---------VH 448
++FE++ LG G G V+ S + V + L L++K +R +H
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH------LEIKPAIRNQIIRELQVLH 62
Query: 449 HRNLTALIGY---CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
N ++G+ + + E+M G+LDQ LK + ++ IAV +GL
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGL 120
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
YL K I+HRDVK SNIL+N + + K+ DFG+S + D+++ GT Y+
Sbjct: 121 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDEMANEFVGTRSYMS 174
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
PE + +SD++S G+ L+E+ GR P
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 27/238 (11%)
Query: 380 NDSFAPKSRQFAYSEIQKITNNFERV--LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCF 436
+DS A + S ++ FE V +G G +G+VY G + Q A+K++ +
Sbjct: 4 SDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE 63
Query: 437 Q---LLQVKLLMRV-HHRNLTALIGYCIEGNNMG------LIYEYMASGTLDQYLKGKKE 486
+ ++ +L + HHRN+ G I+ N G L+ E+ +G++ +K K
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG 123
Query: 487 HMLN--WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRI 544
+ L W+ I + +GL +LH + ++HRD+K N+LL E + K+ DFG+S
Sbjct: 124 NTLKEEWI--AYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS-- 176
Query: 545 FSIESSDQISTAVAGTPGYLDPEYYVLN-----WLNEKSDVYSFGVVLLEIITGRRPV 597
++ + GTP ++ PE + + KSD++S G+ +E+ G P+
Sbjct: 177 AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 406 LGKGGFGEV---YHGSLDDNQQ--VAVKMLSSSCCFQLL----QVKLLMRVHHRNLTALI 456
LGKG FG V + L DN VAVK L S Q ++++L +H +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 457 G--YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
G Y + L+ EY+ SG L +L+ + L+ L + +G+EYL G +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYL--GSRR 131
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYYVLNW 573
VHRD+ + NIL+ + KIADFGL+++ ++ + +P + PE N
Sbjct: 132 -CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNI 190
Query: 574 LNEKSDVYSFGVVLLEIIT 592
+ +SDV+SFGVVL E+ T
Sbjct: 191 FSRQSDVWSFGVVLYELFT 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCI--- 460
+LG GG EV+ L ++ VAVK+L + L R +N AL I
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAV 77
Query: 461 ---------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G ++ EY+ TL + E + +++ D+ Q L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQN 135
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS--TAVAGTPGYLDPEYY 569
I+HRDVK +NI+++ K+ DFG++R + +S + ++ AV GT YL PE
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
+ ++ +SDVYS G VL E++TG P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALI 456
+ +GKG F +V + ++VAVK++ SSS +V+++ ++H N+ L
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPI 516
+ L+ EY + G + YL W++ + Q + + Y + I
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAH-----GWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 517 VHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-LNWLN 575
VHRD+K+ N+LL+ + KIADFG S F+ +++ T G+P Y PE + +
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDT-FCGSPPYAAPELFQGKKYDG 184
Query: 576 EKSDVYSFGVVLLEIITGRRP 596
+ DV+S GV+L +++G P
Sbjct: 185 PEVDVWSLGVILYTLVSGSLP 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 51/300 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDD------NQQVAVKMLSSSCCF----QLLQVKLLM 445
+KIT R LG+G FG VY G+ D +VAVK ++ S + L +M
Sbjct: 16 EKIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 73
Query: 446 R---VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVER 494
+ HH + L+G +G ++ E MA G L YL+ + N E
Sbjct: 74 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 495 LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS 554
+Q+A + A G+ YL+ VHRD+ + N ++ KI DFG++R I +D
Sbjct: 132 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR 186
Query: 555 TAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
G ++ PE SD++SFGVVL EI T+ Q
Sbjct: 187 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------------TSLAEQPY 232
Query: 613 NSMLAEGDIRNIVDPSLQGNFD--NNSAWKAVELALACASHTSSERPTMTDVLMELKECL 670
+ E ++ ++D G D +N + +L C RPT +++ LK+ L
Sbjct: 233 QGLSNEQVLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 289
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 118/280 (42%), Gaps = 44/280 (15%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQVAV--------KMLSSSCCFQLLQVKLLMRVHHRNL 452
F+ +G+G F VY G LD V V K+ S + + L + H N+
Sbjct: 29 KFDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNI 87
Query: 453 TALIGY---CIEGNN-MGLIYEYMASGTLDQYLK----GKKEHMLNWVERLQIAVDSAQG 504
++G + L+ E SGTL YLK K + + +W ++ +G
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKG 141
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKL-QAKIADFGLSRIFSIESSDQISTAVAGTPGY 563
L++LH PPI+HRD+K NI + KI D GL+ + + AV GTP +
Sbjct: 142 LQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEF 196
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRN 623
PE Y + +E DVY+FG LE T P S+ N+ + +
Sbjct: 197 XAPEXYEEKY-DESVDVYAFGXCXLEXATSEYPY-----------SECQNAAQIYRRVTS 244
Query: 624 IVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
V P+ +FD + + E+ C ER ++ D+L
Sbjct: 245 GVKPA---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 406 LGKGGFGEV---YHGSLDDNQQ--VAVKMLSSSCCFQLL----QVKLLMRVHHRNLTALI 456
LGKG FG V + L DN VAVK L S Q ++++L +H +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 457 G--YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
G Y ++ L+ EY+ SG L +L+ + L+ L + +G+EYL G +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYL--GSRR 134
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYYVLNW 573
VHRD+ + NIL+ + KIADFGL+++ ++ + +P + PE N
Sbjct: 135 -CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 193
Query: 574 LNEKSDVYSFGVVLLEIIT 592
+ +SDV+SFGVVL E+ T
Sbjct: 194 FSRQSDVWSFGVVLYELFT 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 28/224 (12%)
Query: 402 FERVLGKGGFGEVYHGSLDDNQQVAVKMLSSS---CCFQLLQVKLLMRVHHRNLTALIGY 458
+ +GKG FGEV+ G ++VAVK+ SS F+ ++ + + H N+ I
Sbjct: 33 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 459 CIEGN----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC-- 512
+ N + L+ +Y G+L YL + + +++A+ +A GL +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 513 ---KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDP 566
KP I HRD+KS NIL+ + IAD GL+ + ++D I A GT Y+ P
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 567 EYY--VLNWLN----EKSDVYSFGVVLLEIITGRRPVISRAEDD 604
E +N + +++D+Y+ G+V EI RR I +D
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHED 249
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLSSS---CCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+GKG FGEV+ G ++VAVK+ SS F+ ++ + + H N+ I +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 463 N----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC-----K 513
N + L+ +Y G+L YL + + +++A+ +A GL +LH K
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDPEYY- 569
P I HRD+KS NIL+ + IAD GL+ + ++D I A GT Y+ PE
Sbjct: 128 PAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 186
Query: 570 -VLNWLN----EKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+N + +++D+Y+ G+V EI RR I +D
Sbjct: 187 DSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHED 224
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLSSS---CCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+GKG FGEV+ G ++VAVK+ SS F+ ++ + + H N+ I +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 463 N----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC-----K 513
N + L+ +Y G+L YL + + +++A+ +A GL +LH K
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDPEYY- 569
P I HRD+KS NIL+ + IAD GL+ + ++D I A GT Y+ PE
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 185
Query: 570 -VLNWLN----EKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+N + +++D+Y+ G+V EI RR I +D
Sbjct: 186 DSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHED 223
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 28/224 (12%)
Query: 402 FERVLGKGGFGEVYHGSLDDNQQVAVKMLSSS---CCFQLLQVKLLMRVHHRNLTALIGY 458
+ +GKG FGEV+ G ++VAVK+ SS F+ ++ + + H N+ I
Sbjct: 46 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 459 CIEGN----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC-- 512
+ N + L+ +Y G+L YL + + +++A+ +A GL +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 513 ---KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDP 566
KP I HRD+KS NIL+ + IAD GL+ + ++D I A GT Y+ P
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 567 EYY--VLNWLN----EKSDVYSFGVVLLEIITGRRPVISRAEDD 604
E +N + +++D+Y+ G+V EI RR I +D
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHED 262
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 34/268 (12%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKML------SSSCCFQLL-QVKLLMRVHHRNLTAL 455
R LGKG FG VY ++ + A+K+L + QL +V++ + H N+ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
GY + + LI EY GT+ Y + +K + + A L Y H
Sbjct: 78 YGYFHDATRVYLILEYAPLGTV--YRELQKLSRFDEQRTATYITELANALSYCH---SKR 132
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
++HRD+K N+LL + KIADFG +S+ + + GT YL PE +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEMIEGRMHD 188
Query: 576 EKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDN 635
EK D++S GV+ E + G P + +T R I ++ F +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQET---------------YRRI--SRVEFTFPD 231
Query: 636 NSAWKAVELALACASHTSSERPTMTDVL 663
A +L H +S+R T+ +VL
Sbjct: 232 FVTEGARDLISRLLKHNASQRLTLAEVL 259
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 406 LGKGGFGEV---YHGSLDDNQQ--VAVKMLSSSCCFQLL----QVKLLMRVHHRNLTALI 456
LGKG FG V + L DN VAVK L S Q ++++L +H +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 457 G--YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
G Y ++ L+ EY+ SG L +L+ + L+ L + +G+EYL G +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYL--GSRR 135
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYYVLNW 573
VHRD+ + NIL+ + KIADFGL+++ ++ + +P + PE N
Sbjct: 136 -CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 194
Query: 574 LNEKSDVYSFGVVLLEIIT 592
+ +SDV+SFGVVL E+ T
Sbjct: 195 FSRQSDVWSFGVVLYELFT 213
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLSSS---CCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+GKG FGEV+ G ++VAVK+ SS F+ ++ + + H N+ I +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 463 N----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC-----K 513
N + L+ +Y G+L YL + + +++A+ +A GL +LH K
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 132
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDPEYY- 569
P I HRD+KS NIL+ + IAD GL+ + ++D I A GT Y+ PE
Sbjct: 133 PAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 191
Query: 570 -VLNWLN----EKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+N + +++D+Y+ G+V EI RR I +D
Sbjct: 192 DSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHED 229
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLSSS---CCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+GKG FGEV+ G ++VAVK+ SS F+ ++ + + H N+ I +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 463 N----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC-----K 513
N + L+ +Y G+L YL + + +++A+ +A GL +LH K
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 129
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA---VAGTPGYLDPEYY- 569
P I HRD+KS NIL+ + IAD GL+ + ++D I A GT Y+ PE
Sbjct: 130 PAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 188
Query: 570 -VLNWLN----EKSDVYSFGVVLLEIITGRRPVISRAEDD 604
+N + +++D+Y+ G+V EI RR I +D
Sbjct: 189 DSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHED 226
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 102/206 (49%), Gaps = 30/206 (14%)
Query: 406 LGKGGFGEVYHGSLDDNQQ-VAVKMLSSSCCFQLL-----------QVKLLMRVHHRNLT 453
LG+G FG+V + QQ VA+K +S QLL ++ L + H ++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISR----QLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 454 ALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L ++ ++ EY A G L Y+ KK + R + A +EY H +
Sbjct: 73 KLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCH---R 126
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN- 572
IVHRD+K N+LL++ L KIADFGLS I + + + T+ G+P Y PE V+N
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTS-CGSPNYAAPE--VING 181
Query: 573 --WLNEKSDVYSFGVVLLEIITGRRP 596
+ + DV+S G+VL ++ GR P
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCI--- 460
+LG GG EV+ L ++ VAVK+L + L R +N AL I
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP-SFYLRFRREAQNAAALNHPAIVAV 94
Query: 461 ---------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G ++ EY+ TL + E + +++ D+ Q L + H
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQN 152
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS--TAVAGTPGYLDPEYY 569
I+HRDVK +NI+++ K+ DFG++R + +S + ++ AV GT YL PE
Sbjct: 153 G---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
+ ++ +SDVYS G VL E++TG P
Sbjct: 209 RGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 24/200 (12%)
Query: 406 LGKGGFGE-VYHGSLDDNQQVAVK------MLSSSCCFQLLQVKLLMRVHHRNLTALIGY 458
+G+G FG+ + S +D +Q +K M S +V +L + H N+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 459 CIEGNNMGLIYEYMASGTLDQYLKGKK------EHMLNWVERLQIAVDSAQGLEYLHYGC 512
E ++ ++ +Y G L + + +K + +L+W ++ +A L+++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH--- 142
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+KS NI L + ++ DFG++R+ + S+ +++ A GTP YL PE
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENK 200
Query: 573 WLNEKSDVYSFGVVLLEIIT 592
N KSD+++ G VL E+ T
Sbjct: 201 PYNNKSDIWALGCVLYELCT 220
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 406 LGKGGFGEV---YHGSLDDNQQ--VAVKMLSSSCCFQLL----QVKLLMRVHHRNLTALI 456
LGKG FG V + L DN VAVK L S Q ++++L +H +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 457 G--YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
G Y ++ L+ EY+ SG L +L+ + L+ L + +G+EYL G +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYL--GSRR 147
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-LDPEYYVLNW 573
VHRD+ + NIL+ + KIADFGL+++ ++ + +P + PE N
Sbjct: 148 -CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI 206
Query: 574 LNEKSDVYSFGVVLLEIIT 592
+ +SDV+SFGVVL E+ T
Sbjct: 207 FSRQSDVWSFGVVLYELFT 225
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 124/303 (40%), Gaps = 57/303 (18%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDD------NQQVAVKMLSSSCCF----QLLQVKLLM 445
+KIT R LG+G FG VY G+ D +VAVK ++ S + L +M
Sbjct: 17 EKIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 446 R---VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVER 494
+ HH + L+G +G ++ E MA G L YL+ + N E
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 495 LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS 554
+Q+A + A G+ YL+ VHRD+ + N ++ KI DFG++R D
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR-------DIYE 182
Query: 555 TAVAGTPG-------YLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTH 607
TA G ++ PE SD++SFGVVL EI T+
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------------TSL 228
Query: 608 ISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELK 667
Q + E ++ ++D DN + +L C RPT +++ LK
Sbjct: 229 AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE-RVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
Query: 668 ECL 670
+ L
Sbjct: 288 DDL 290
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 396 QKITNNFERVLGKGGFGEVYHG-SLDDNQQVAVKM--LSSSCCFQLLQVKLLMRVHHRN- 451
+K FE++ G+G G VY + Q+VA++ L +L+ ++L+ ++N
Sbjct: 20 KKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 78
Query: 452 --LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ L Y + G+ + ++ EY+A G+L + E ++ + + + Q LE+LH
Sbjct: 79 NIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLH 134
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
++HR++KS NILL K+ DFG + E S + + + GTP ++ PE
Sbjct: 135 SN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVV 189
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
K D++S G++ +E+I G P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQ-QVAVKMLSSSCC------FQLL-QVKLLMRVHH 449
++FE R LGKG FG VY + VA+K+L S QL ++++ +HH
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
N+ L Y + + LI EY G L Y + +K + I + A L Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGEL--YKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
G K ++HRD+K N+LL K + KIADFG +S+ + + GT YL PE
Sbjct: 141 -GKK--VIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCGTLDYLPPEMI 193
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
NEK D++ GV+ E++ G P S + ++T
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNET 229
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 395 IQKITNNFERV---LGKGGFGEVYHGSLDD---NQQVAVKMLSSSCCFQLLQVKLLMR-V 447
I KI N ++ LG GG VY +D N +VA+K + + +K R V
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREV 62
Query: 448 H------HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDS 501
H H+N+ ++I E + L+ EY+ TL +Y++ ++VD+
Sbjct: 63 HNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG----------PLSVDT 112
Query: 502 A-----QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
A Q L+ + + IVHRD+K NIL++ KI DFG+++ S E+S +
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNH 171
Query: 557 VAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
V GT Y PE +E +D+YS G+VL E++ G P
Sbjct: 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 47/298 (15%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDD------NQQVAVKMLSSSCCF----QLLQVKLLM 445
+KIT R LG+G FG VY G+ D +VAVK ++ S + L +M
Sbjct: 17 EKIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 446 R---VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVER 494
+ HH + L+G +G ++ E MA G L YL+ + N E
Sbjct: 75 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 495 LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS 554
+Q+A + A G+ YL+ VHR++ + N ++ KI DFG++R I +D
Sbjct: 133 IQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR 187
Query: 555 TAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
G ++ PE SD++SFGVVL EI T+ Q
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------------TSLAEQPY 233
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECL 670
+ E ++ ++D DN + +L C + RPT +++ LK+ L
Sbjct: 234 QGLSNEQVLKFVMDGGYLDQPDNCPE-RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 47/298 (15%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSLDD------NQQVAVKMLSSSCCF----QLLQVKLLM 445
+KIT R LG+G FG VY G+ D +VAVK ++ S + L +M
Sbjct: 18 EKIT--LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 75
Query: 446 R---VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN--------WVER 494
+ HH + L+G +G ++ E MA G L YL+ + N E
Sbjct: 76 KGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 495 LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS 554
+Q+A + A G+ YL+ VHR++ + N ++ KI DFG++R I +D
Sbjct: 134 IQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR--DIYETDYYR 188
Query: 555 TAVAG--TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
G ++ PE SD++SFGVVL EI T+ Q
Sbjct: 189 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------------TSLAEQPY 234
Query: 613 NSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECL 670
+ E ++ ++D DN + +L C + RPT +++ LK+ L
Sbjct: 235 QGLSNEQVLKFVMDGGYLDQPDNCPE-RVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 149
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + + GT Y+ PE
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
++ SD+++ G ++ +++ G P
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQ---VKLLMRVH----HRNLTALIG 457
LGKGGF + + S D ++V A K++ S + Q + + + +H H+++ G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ + + + ++ E +L + K +K L E G +YLH + ++
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLH---RNRVI 143
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+K N+ LNE L+ KI DFGL+ +E + + GTP Y+ PE + +
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 578 SDVYSFGVVLLEIITGRRP 596
DV+S G ++ ++ G+ P
Sbjct: 202 VDVWSIGCIMYTLLVGKPP 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQ---VKLLMRVH----HRNLTALIG 457
LGKGGF + + S D ++V A K++ S + Q + + + +H H+++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ + + + ++ E +L + K +K L E G +YLH + ++
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLH---RNRVI 139
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+K N+ LNE L+ KI DFGL+ +E + + GTP Y+ PE + +
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 578 SDVYSFGVVLLEIITGRRP 596
DV+S G ++ ++ G+ P
Sbjct: 198 VDVWSIGCIMYTLLVGKPP 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 34/296 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLSSSCCF------QLLQVKLLM 445
EIQ+ R +G+G FG+V+ G +N +AV + + C + LQ L M
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 446 R-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
R H ++ LIG E N + +I E G L +L+ +K + L+ + A +
Sbjct: 69 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTA 126
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
L YL VHRD+ + N+L++ K+ DFGLSR +E S + P +
Sbjct: 127 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKW 181
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIR 622
+ PE SDV+ FGV + EI+ G +P +D G I
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI------------GRIE 229
Query: 623 NIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLSLEIVRNE 678
N + N L C ++ S RP T++ +L L E + E
Sbjct: 230 N----GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQE 281
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 147
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + A GT Y+ PE
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 34/296 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLSSSCCF------QLLQVKLLM 445
EIQ+ R +G+G FG+V+ G +N +AV + + C + LQ L M
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 446 R-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
R H ++ LIG E N + +I E G L +L+ +K + L+ + A +
Sbjct: 68 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTA 125
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
L YL VHRD+ + N+L++ K+ DFGLSR +E S + P +
Sbjct: 126 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKW 180
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIR 622
+ PE SDV+ FGV + EI+ G +P +D G I
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI------------GRIE 228
Query: 623 NIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLSLEIVRNE 678
N + N L C ++ S RP T++ +L L E + E
Sbjct: 229 N----GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQE 280
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQ---VKLLMRVH----HRNLTALIG 457
LGKGGF + + S D ++V A K++ S + Q + + + +H H+++ G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ + + + ++ E +L + K +K L E G +YLH + ++
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLH---RNRVI 161
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+K N+ LNE L+ KI DFGL+ +E + + GTP Y+ PE + +
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 578 SDVYSFGVVLLEIITGRRP 596
DV+S G ++ ++ G+ P
Sbjct: 220 VDVWSIGCIMYTLLVGKPP 238
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 34/296 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLSSSCCF------QLLQVKLLM 445
EIQ+ R +G+G FG+V+ G +N +AV + + C + LQ L M
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 446 R-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
R H ++ LIG E N + +I E G L +L+ +K + L+ + A +
Sbjct: 63 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTA 120
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
L YL VHRD+ + N+L++ K+ DFGLSR +E S + P +
Sbjct: 121 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKW 175
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIR 622
+ PE SDV+ FGV + EI+ G +P +D G I
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI------------GRIE 223
Query: 623 NIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLSLEIVRNE 678
N + N L C ++ S RP T++ +L L E + E
Sbjct: 224 N----GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQE 275
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQ---VKLLMRVH----HRNLTALIG 457
LGKGGF + + S D ++V A K++ S + Q + + + +H H+++ G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ + + + ++ E +L + K +K L E G +YLH + ++
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLH---RNRVI 163
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+K N+ LNE L+ KI DFGL+ +E + + GTP Y+ PE + +
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 578 SDVYSFGVVLLEIITGRRP 596
DV+S G ++ ++ G+ P
Sbjct: 222 VDVWSIGCIMYTLLVGKPP 240
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQ---VKLLMRVH----HRNLTALIG 457
LGKGGF + + S D ++V A K++ S + Q + + + +H H+++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ + + + ++ E +L + K +K L E G +YLH + ++
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLH---RNRVI 139
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+K N+ LNE L+ KI DFGL+ +E + + GTP Y+ PE + +
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 578 SDVYSFGVVLLEIITGRRP 596
DV+S G ++ ++ G+ P
Sbjct: 198 VDVWSIGCIMYTLLVGKPP 216
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 39/219 (17%)
Query: 402 FERVLGKGGFGEVYHGSLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNL 452
F+ V+G+G FG+V + + A+K + ++++L ++ HH N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERLQIA 498
L+G C + L EY G L +L+ + L+ + L A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
D A+G++YL + +HRD+ + NIL+ E AKIADFGLSR + V
Sbjct: 139 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------YVK 187
Query: 559 GTPGYLDPEYYVLNWLN-----EKSDVYSFGVVLLEIIT 592
T G L + + LN SDV+S+GV+L EI++
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 401 NFERVLGKGGFGEVYHGSLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRN 451
F+ V+G+G FG+V + + A+K + ++++L ++ HH N
Sbjct: 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 452 LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERLQI 497
+ L+G C + L EY G L +L+ + L+ + L
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
A D A+G++YL + +HRD+ + NIL+ E AKIADFGLSR + V
Sbjct: 148 AADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------YV 196
Query: 558 AGTPGYLDPEYYVLNWLN-----EKSDVYSFGVVLLEIIT 592
T G L + + LN SDV+S+GV+L EI++
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQ---VKLLMRVH----HRNLTALIG 457
LGKGGF + + S D ++V A K++ S + Q + + + +H H+++ G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ + + + ++ E +L + K +K L E G +YLH + ++
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLH---RNRVI 137
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+K N+ LNE L+ KI DFGL+ +E + + GTP Y+ PE + +
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 578 SDVYSFGVVLLEIITGRRP 596
DV+S G ++ ++ G+ P
Sbjct: 196 VDVWSIGCIMYTLLVGKPP 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 397 KITN-NFERVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
K+T+ NF VLGKG FG+V +++ A+K+L Q V+ M V R L
Sbjct: 17 KLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTM-VEKRVLAL 75
Query: 455 L--------IGYCIEG-NNMGLIYEYMASGTL----DQYLKGKKEHMLNWVERLQIAVDS 501
L + C + + + + EY+ G L Q K K+ + + + I
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI---- 131
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST-AVAGT 560
GL +LH K I++RD+K N++L+ + KIADFG+ + + D ++T GT
Sbjct: 132 --GLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM---DGVTTREFCGT 183
Query: 561 PGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
P Y+ PE + D +++GV+L E++ G+ P ED+
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLSSSCCF------QLLQVKLLM 445
EIQ+ R +G+G FG+V+ G +N +AV + + C + LQ L M
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 446 R-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
R H ++ LIG E N + +I E G L +L+ +K + L+ + A +
Sbjct: 94 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTA 151
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
L YL VHRD+ + N+L++ K+ DFGLSR +E S + P +
Sbjct: 152 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKW 206
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP--------VISRAED 603
+ PE SDV+ FGV + EI+ G +P VI R E+
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 255
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLSSSCCF------QLLQVKLLM 445
EIQ+ R +G+G FG+V+ G +N +AV + + C + LQ L M
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 446 R-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
R H ++ LIG E N + +I E G L +L+ +K + L+ + A +
Sbjct: 71 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTA 128
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
L YL VHRD+ + N+L++ K+ DFGLSR +E S + P +
Sbjct: 129 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKW 183
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP--------VISRAED 603
+ PE SDV+ FGV + EI+ G +P VI R E+
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 232
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLSSSCCF------QLLQVKLLM 445
EIQ+ R +G+G FG+V+ G +N +AV + + C + LQ L M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 446 R-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
R H ++ LIG E N + +I E G L +L+ +K + L+ + A +
Sbjct: 66 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTA 123
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
L YL VHRD+ + N+L++ K+ DFGLSR +E S + P +
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKW 178
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP--------VISRAED 603
+ PE SDV+ FGV + EI+ G +P VI R E+
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 25/216 (11%)
Query: 404 RVLGKGGFGEVY-----HGSLDDNQQVAVKMLSSSCCFQLLQVK------LLMRVHHRNL 452
+VLG+G FG+V+ GS D Q A+K+L + +V+ +L+ V+H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGS-DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 453 TAL-IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
L + EG + LI +++ G D + + KE M + + A L++LH
Sbjct: 89 VKLHYAFQTEGK-LYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALALDHLH-- 143
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA--GTPGYLDPEYY 569
I++RD+K NILL+E+ K+ DFGLS+ ES D A + GT Y+ PE
Sbjct: 144 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ +D +SFGV++ E++TG P + +T
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLSSSCCF------QLLQVKLLM 445
EIQ+ R +G+G FG+V+ G +N +AV + + C + LQ L M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 446 R-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
R H ++ LIG E N + +I E G L +L+ +K + L+ + A +
Sbjct: 66 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTA 123
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
L YL VHRD+ + N+L++ K+ DFGLSR +E S + P +
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKW 178
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP--------VISRAED 603
+ PE SDV+ FGV + EI+ G +P VI R E+
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 73 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 127
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 188 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 221
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 63/306 (20%)
Query: 404 RVLGKGGFGEVYHGSL------DDNQQVAVKML----SSSCCFQLL-QVKLLMRVHHRNL 452
+ LG+G FG+V + VAVKML S S LL + +L +V+H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK----------------------EHMLN 490
L G C + + LI EY G+L +L+ + E L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 491 WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESS 550
+ + A +QG++YL + +VHRD+ + NIL+ E + KI+DFGLSR E S
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 551 DQISTAVAGTPGYLDPEYYVLNWL-----NEKSDVYSFGVVLLEIIT-GRRPVISRAEDD 604
V + G + ++ + L +SDV+SFGV+L EI+T G P
Sbjct: 206 -----XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG----- 255
Query: 605 TTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLM 664
+ + N++ + +N + + L L C +RP D+
Sbjct: 256 -----------IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 665 ELKECL 670
+L++ +
Sbjct: 305 DLEKMM 310
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLSSSCCF------QLLQVKLLM 445
EIQ+ R +G+G FG+V+ G +N +AV + + C + LQ L M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 446 R-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
R H ++ LIG E N + +I E G L +L+ +K L+ + A +
Sbjct: 66 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTA 123
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
L YL VHRD+ + N+L++ K+ DFGLSR +E S + P +
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTXXKASKGKLPIKW 178
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ PE SDV+ FGV + EI+ G +P
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 63/306 (20%)
Query: 404 RVLGKGGFGEVYHGSL------DDNQQVAVKML----SSSCCFQLL-QVKLLMRVHHRNL 452
+ LG+G FG+V + VAVKML S S LL + +L +V+H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK----------------------EHMLN 490
L G C + + LI EY G+L +L+ + E L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 491 WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESS 550
+ + A +QG++YL + +VHRD+ + NIL+ E + KI+DFGLSR E S
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 551 DQISTAVAGTPGYLDPEYYVLNWL-----NEKSDVYSFGVVLLEIIT-GRRPVISRAEDD 604
V + G + ++ + L +SDV+SFGV+L EI+T G P
Sbjct: 206 -----XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG----- 255
Query: 605 TTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLM 664
+ + N++ + +N + + L L C +RP D+
Sbjct: 256 -----------IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 665 ELKECL 670
+L++ +
Sbjct: 305 DLEKMM 310
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 453 TALIGYCIEGNN---MGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L +C + + GL Y +G L +Y++ K R A + LEYLH
Sbjct: 100 VKLY-FCFQDDEKLYFGL--SYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH 154
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 155 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 63/306 (20%)
Query: 404 RVLGKGGFGEVYHGSL------DDNQQVAVKML----SSSCCFQLL-QVKLLMRVHHRNL 452
+ LG+G FG+V + VAVKML S S LL + +L +V+H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK----------------------EHMLN 490
L G C + + LI EY G+L +L+ + E L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 491 WVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESS 550
+ + A +QG++YL + +VHRD+ + NIL+ E + KI+DFGLSR E S
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 551 DQISTAVAGTPGYLDPEYYVLNWL-----NEKSDVYSFGVVLLEIIT-GRRPVISRAEDD 604
V + G + ++ + L +SDV+SFGV+L EI+T G P
Sbjct: 206 -----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG----- 255
Query: 605 TTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLM 664
+ + N++ + +N + + L L C +RP D+
Sbjct: 256 -----------IPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304
Query: 665 ELKECL 670
+L++ +
Sbjct: 305 DLEKMM 310
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 150
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + + GT Y+ PE
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQ-----VAVKMLSSSCC----FQLLQVKLLM-RVHHRNLT 453
+VLG G FG VY G + VA+K+L+ + + + L+M + H +L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 454 ALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH-----MLNWVERLQIAVDSAQGLEYL 508
L+G C+ + L+ + M G L +Y+ K++ +LNW V A+G+ YL
Sbjct: 81 RLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 133
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
+ +VHRD+ + N+L+ KI DFGL+R+ + + + ++ E
Sbjct: 134 E---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+SDV+S+GV + E++T G +P
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 25/216 (11%)
Query: 404 RVLGKGGFGEVY-----HGSLDDNQQVAVKMLSSSCCFQLLQVK------LLMRVHHRNL 452
+VLG+G FG+V+ GS D Q A+K+L + +V+ +L+ V+H +
Sbjct: 31 KVLGQGSFGKVFLVKKISGS-DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 89
Query: 453 TAL-IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
L + EG + LI +++ G D + + KE M + + A L++LH
Sbjct: 90 VKLHYAFQTEGK-LYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALALDHLH-- 144
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA--GTPGYLDPEYY 569
I++RD+K NILL+E+ K+ DFGLS+ ES D A + GT Y+ PE
Sbjct: 145 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVV 199
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ +D +SFGV++ E++TG P + +T
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 235
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 71 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 125
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 186 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 219
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQVKLL---MRVHHR----NLTAL 455
R LGKGGF + Y + D ++V A K++ S + Q + + + +H ++
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
G+ + + + ++ E +L + K +K + E + QG++YLH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQGVQYLHNN---R 162
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
++HRD+K N+ LN+ + KI DFGL+ IE + + GTP Y+ PE +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 576 EKSDVYSFGVVLLEIITGRRP 596
+ D++S G +L ++ G+ P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 22/234 (9%)
Query: 375 EFENRNDSFA-PKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLS 431
E + D++ P +R + EIQ+ R +G+G FG+V+ G +N +AV + +
Sbjct: 369 EIIDEEDTYTMPSTRDY---EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKT 425
Query: 432 SSCCF------QLLQVKLLMR-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGK 484
C + LQ L MR H ++ LIG E N + +I E G L +L+ +
Sbjct: 426 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVR 484
Query: 485 KEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRI 544
K L+ + A + L YL VHRD+ + N+L++ K+ DFGLSR
Sbjct: 485 K-FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540
Query: 545 FSIESSDQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+E S + P ++ PE SDV+ FGV + EI+ G +P
Sbjct: 541 --MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 25/216 (11%)
Query: 404 RVLGKGGFGEVY-----HGSLDDNQQVAVKMLSSSCCFQLLQVK------LLMRVHHRNL 452
+VLG+G FG+V+ GS D Q A+K+L + +V+ +L+ V+H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGS-DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI 88
Query: 453 TAL-IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
L + EG + LI +++ G D + + KE M + + A L++LH
Sbjct: 89 VKLHYAFQTEGK-LYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALALDHLH-- 143
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA--GTPGYLDPEYY 569
I++RD+K NILL+E+ K+ DFGLS+ ES D A + GT Y+ PE
Sbjct: 144 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVV 198
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ +D +SFGV++ E++TG P + +T
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQ-----VAVKMLSSSCC----FQLLQVKLLM-RVHHRNLT 453
+VLG G FG VY G + VA+K+L+ + + + L+M + H +L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 454 ALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH-----MLNWVERLQIAVDSAQGLEYL 508
L+G C+ + L+ + M G L +Y+ K++ +LNW V A+G+ YL
Sbjct: 104 RLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
+ +VHRD+ + N+L+ KI DFGL+R+ + + + ++ E
Sbjct: 157 E---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 569 YVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+SDV+S+GV + E++T G +P
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 73 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 127
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 188 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 73 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 127
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 188 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 73 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 127
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 188 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 40/212 (18%)
Query: 404 RVLGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNL 452
R +G G +G V Y L Q+VAVK LS FQ L +++LL + H N+
Sbjct: 26 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRP--FQSLIHARRTYRELRLLKHLKHENV 81
Query: 453 TALI-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQG 504
L+ IE + + + L+ +K + EH+ V +L +G
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL------LRG 135
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYL 564
L+Y+H I+HRD+K SN+ +NE + +I DFGL+R +D+ T T Y
Sbjct: 136 LKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYR 187
Query: 565 DPEYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
PE +LNW+ N+ D++S G ++ E++ G+
Sbjct: 188 APE-IMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 73 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 127
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 188 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 221
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 22/234 (9%)
Query: 375 EFENRNDSFA-PKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLS 431
E + D++ P +R + EIQ+ R +G+G FG+V+ G +N +AV + +
Sbjct: 369 EIIDEEDTYTMPSTRDY---EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKT 425
Query: 432 SSCCF------QLLQVKLLMR-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGK 484
C + LQ L MR H ++ LIG E N + +I E G L +L+ +
Sbjct: 426 CKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVR 484
Query: 485 KEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRI 544
K L+ + A + L YL VHRD+ + N+L++ K+ DFGLSR
Sbjct: 485 K-FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRY 540
Query: 545 FSIESSDQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+E S + P ++ PE SDV+ FGV + EI+ G +P
Sbjct: 541 --MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQVKLL---MRVHHR----NLTAL 455
R LGKGGF + Y + D ++V A K++ S + Q + + + +H ++
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
G+ + + + ++ E +L + K +K + E + QG++YLH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQGVQYLHNN---R 162
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
++HRD+K N+ LN+ + KI DFGL+ IE + + GTP Y+ PE +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 576 EKSDVYSFGVVLLEIITGRRP 596
+ D++S G +L ++ G+ P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 127
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPP 211
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 73 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 127
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 188 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 221
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 149
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDW 220
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 124
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPP 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 126
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPP 210
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSL--DDNQQVAVKMLSSSCCF------QLLQVKLLM 445
EIQ+ R +G+G FG+V+ G +N +AV + + C + LQ L M
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 446 R-VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
R H ++ LIG E N + +I E G L +L+ +K L+ + A +
Sbjct: 66 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTA 123
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GY 563
L YL VHRD+ + N+L++ K+ DFGLSR +E S + P +
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKW 178
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP--------VISRAED 603
+ PE SDV+ FGV + EI+ G +P VI R E+
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 73 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 127
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 188 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 221
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 73 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 127
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 188 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 221
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAV-KMLSSSCCFQL----LQVKLLMRVHHRNLTALIGYCI 460
LG G FG+VY + +A K++ + +L +++ +L H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 461 EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
NN+ ++ E+ A G +D + + + QI V Q L+ L+Y I+HRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 521 VKSSNILLNEKLQAKIADFGLS--RIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE-- 576
+K+ NIL K+ADFG+S +I+ D + GTP ++ PE + +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD----SFIGTPYWMAPEVVMCETSKDRP 216
Query: 577 ---KSDVYSFGVVLLEIITGRRP 596
K+DV+S G+ L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 147
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 147
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDN--QQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 40 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 96
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 150
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 151 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 202
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 203 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 125
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPP 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G +GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 36/208 (17%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTALI 456
+G G +G V +VAVK LS FQ + +++LL + H N+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 457 -----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEYL 508
+E N + ++ L+ +K +K +H+ + ++ +GL+Y+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYI 141
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE- 192
Query: 569 YVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 146
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + + GT Y+ PE
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 14 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 68
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW- 126
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 127 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 178
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQ------VAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
+F VLG G F EV Q+ +A K L ++ +L ++ H N+ A
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
L G ++ LI + ++ G L + K + RL V A ++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH---DL 135
Query: 515 PIVHRDVKSSNIL---LNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
IVHRD+K N+L L+E + I+DFGLS++ E + + GTPGY+ PE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRP 596
++ D +S GV+ ++ G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 149
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQVKLL---MRVHHR----NLTAL 455
R LGKGGF + Y + D ++V A K++ S + Q + + + +H ++
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 107
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
G+ + + + ++ E +L + K +K + E + QG++YLH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQGVQYLHNN---R 162
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
++HRD+K N+ LN+ + KI DFGL+ IE + + GTP Y+ PE +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 576 EKSDVYSFGVVLLEIITGRRP 596
+ D++S G +L ++ G+ P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 152
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 213 SACKSSDLWALGCIIYQLVAGLPP 236
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 36/208 (17%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTALI 456
+G G +G V +VAVK LS FQ + +++LL + H N+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 457 -----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEYL 508
+E N + ++ L+ +K +K +H+ + ++ +GL+Y+
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYI 141
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H I+HRD+K SN+ +NE + KI DFGL+R + D+++ VA T Y PE
Sbjct: 142 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVA-TRWYRAPE- 192
Query: 569 YVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 149
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 12 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW- 124
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 125 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 150
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 40/212 (18%)
Query: 404 RVLGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNL 452
R +G G +G V Y L Q+VAVK LS FQ L +++LL + H N+
Sbjct: 34 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRP--FQSLIHARRTYRELRLLKHLKHENV 89
Query: 453 TALI-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQG 504
L+ IE + + + L+ +K + EH+ V +L +G
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQL------LRG 143
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYL 564
L+Y+H I+HRD+K SN+ +NE + +I DFGL+R +D+ T T Y
Sbjct: 144 LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYR 195
Query: 565 DPEYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
PE +LNW+ N+ D++S G ++ E++ G+
Sbjct: 196 APE-IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 147
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R ++D+++ VA T Y PE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVA-TRWYRAPE 199
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 200 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 36/208 (17%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTALI 456
+G G +G V +VAVK LS FQ + +++LL + H N+ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 457 -----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEYL 508
+E N + ++ L+ +K +K +H+ + ++ +GL+Y+
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYI 137
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE- 188
Query: 569 YVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 13 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 67
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW- 125
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 126 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDN--QQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R + D+++ VA T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVA-TRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 149
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 149
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 11 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 65
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW- 123
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 124 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQ-------VKLLMRVHHRNLTAL 455
R LGKGGF + Y + D ++V A K++ S + Q + + + + ++
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF 91
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
G+ + + + ++ E +L + K +K + E + QG++YLH
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQGVQYLHNN---R 146
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN 575
++HRD+K N+ LN+ + KI DFGL+ IE + + GTP Y+ PE +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 576 EKSDVYSFGVVLLEIITGRRP 596
+ D++S G +L ++ G+ P
Sbjct: 205 FEVDIWSLGCILYTLLVGKPP 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 36/208 (17%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTALI 456
+G G +G V +VAVK LS FQ + +++LL + H N+ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 457 -----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEYL 508
+E N + ++ L+ +K +K +H+ + ++ +GL+Y+
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYI 137
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H I+HRD+K SN+ +NE + KI DFGL+R + D+++ VA T Y PE
Sbjct: 138 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVA-TRWYRAPE- 188
Query: 569 YVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 147
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R ++D+++ VA T Y PE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVA-TRWYRAPE 199
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 200 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 147
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R ++D+++ VA T Y PE
Sbjct: 148 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVA-TRWYRAPE 199
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 200 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDN--QQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 36 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 146
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 198
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 199 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 20 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 74
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 75 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 132
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 133 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 184
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 185 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 11 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 65
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW- 123
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 124 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 175
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 176 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALI 456
+ +GKG F +V + ++VAVK++ SSS +V+++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ L+ EY + G + YL G+ + + QI ++Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QK 132
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-LNW 573
IVHRD+K+ N+LL+ + KIADFG S F+ + A G P Y PE + +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKY 189
Query: 574 LNEKSDVYSFGVVLLEIITGRRP 596
+ DV+S GV+L +++G P
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 131
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 10 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW- 122
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 123 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 12 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 124
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 125 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 176
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 40/210 (19%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 IGYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLE 506
+ E N++ L+ M + L+ +K +K +H+ + ++ +GL+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQI------LRGLK 139
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H I+HRD+K SN+ +NE + KI DFGL+R + D+++ VA T Y P
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVA-TRWYRAP 191
Query: 567 EYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
E +LNW+ N+ D++S G ++ E++TGR
Sbjct: 192 E-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGE-VYHGSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 147
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALI 456
+ +GKG F +V + ++VAVK++ SSS +V+++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ L+ EY + G + YL G+ + + QI ++Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QK 132
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-LNW 573
IVHRD+K+ N+LL+ + KIADFG S F+ +++ T G+P Y PE + +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDT-FCGSPPYAAPELFQGKKY 189
Query: 574 LNEKSDVYSFGVVLLEIITGRRP 596
+ DV+S GV+L +++G P
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALI 456
+ +GKG F +V + ++VAVK++ SSS +V+++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ L+ EY + G + YL G+ + + QI ++Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QK 132
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-LNW 573
IVHRD+K+ N+LL+ + KIADFG S F+ +++ T G+P Y PE + +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDT-FCGSPPYAAPELFQGKKY 189
Query: 574 LNEKSDVYSFGVVLLEIITGRRP 596
+ DV+S GV+L +++G P
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 36/208 (17%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTALI 456
+G G +G V +VAVK LS FQ + +++LL + H N+ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 457 -----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEYL 508
+E N + ++ L+ +K +K +H+ + ++ +GL+Y+
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYI 160
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 161 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE- 211
Query: 569 YVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 13 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 67
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 125
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 126 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 7 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 119
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 120 -----CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 171
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 172 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 4 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 58
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 59 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 116
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 117 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 13 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 67
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 125
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 126 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 17 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 71
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 129
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 130 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 35 IGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 145
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 197
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 198 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 35 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 89
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 90 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 147
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 148 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 199
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 200 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 13 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 67
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 125
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 126 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 177
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 178 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 10 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 122
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 123 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 16 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 70
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 71 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 128
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 129 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 181 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 39/219 (17%)
Query: 402 FERVLGKGGFGEVYHGSLDDN---QQVAVKMLSSSCCFQ-----LLQVKLLMRV-HHRNL 452
F+ V+G+G FG+V + + A+K + ++++L ++ HH N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK--------------EHMLNWVERLQIA 498
L+G C + L EY G L +L+ + L+ + L A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
D A+G++YL + +HR++ + NIL+ E AKIADFGLSR + V
Sbjct: 146 ADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV--------YVK 194
Query: 559 GTPGYLDPEYYVLNWLN-----EKSDVYSFGVVLLEIIT 592
T G L + + LN SDV+S+GV+L EI++
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 36/208 (17%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTALI 456
+G G +G V +VAVK LS FQ + +++LL + H N+ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 457 -----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEYL 508
+E N + ++ L+ +K +K +H+ + ++ +GL+Y+
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYI 161
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 162 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE- 212
Query: 569 YVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 37 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 93
Query: 456 IGYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLE 506
+ E N++ L+ M + L+ +K +K +H+ + ++ +GL+
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQI------LRGLK 146
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y P
Sbjct: 147 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 198
Query: 567 EYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
E +LNW+ N+ D++S G ++ E++TGR
Sbjct: 199 E-IMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 401 NFERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHHRNL 452
F ++LG+G F V L +++ A+K+L + +V ++ R+ H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + + Y +G L +Y++ K R A + LEYLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTA-EIVSALEYLH--- 146
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NILLNE + +I DFG +++ S ES + GT Y+ PE
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ SD+++ G ++ +++ G P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 35 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 145
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 197
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 198 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 29 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 85
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 86 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 139
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 140 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 191
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 192 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 26 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 82
Query: 456 IGYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLE 506
+ E N++ L+ M + L+ +K +K +H+ + ++ +GL+
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQI------LRGLK 135
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y P
Sbjct: 136 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 187
Query: 567 EYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
E +LNW+ N+ D++S G ++ E++TGR
Sbjct: 188 E-IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 10 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW- 122
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 123 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQ-VAVKMLSSSCCFQLL-----QVKLLMRVHHRNLTA 454
+F VLG G F EV Q+ VA+K ++ ++ +L ++ H N+ A
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
L G ++ LI + ++ G L + K + RL V A ++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH---DL 135
Query: 515 PIVHRDVKSSNIL---LNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
IVHRD+K N+L L+E + I+DFGLS++ E + + GTPGY+ PE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRP 596
++ D +S GV+ ++ G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 27 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 456 IGYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLE 506
+ E N++ L+ M + L+ +K +K +H+ + ++ +GL+
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQI------LRGLK 136
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y P
Sbjct: 137 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 188
Query: 567 EYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
E +LNW+ N+ D++S G ++ E++TGR
Sbjct: 189 E-IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 28 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 84
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 85 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 138
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 139 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 190
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 191 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQ-VAVKMLSSSCCFQLL-----QVKLLMRVHHRNLTA 454
+F VLG G F EV Q+ VA+K ++ ++ +L ++ H N+ A
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
L G ++ LI + ++ G L + K + RL V A ++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH---DL 135
Query: 515 PIVHRDVKSSNIL---LNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
IVHRD+K N+L L+E + I+DFGLS++ E + + GTPGY+ PE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRP 596
++ D +S GV+ ++ G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 142
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 194
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 195 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 35 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 145
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 197
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 198 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 142
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 194
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 195 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 10 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 122
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 123 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 42 VGSGAYGSVC-AAFDTKTGLRVAVKKLSKP--FQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 152
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 153 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 204
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 205 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAV-KMLSSSCCFQL----LQVKLLMRVHHRNLTALIGYCI 460
LG G FG+VY + +A K++ + +L +++ +L H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 461 EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
NN+ ++ E+ A G +D + + + QI V Q L+ L+Y I+HRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 521 VKSSNILLNEKLQAKIADFGLS--RIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE-- 576
+K+ NIL K+ADFG+S I+ D + GTP ++ PE + +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRRD----SFIGTPYWMAPEVVMCETSKDRP 216
Query: 577 ---KSDVYSFGVVLLEIITGRRP 596
K+DV+S G+ L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQ-VAVKMLSSSCCFQLL-----QVKLLMRVHHRNLTA 454
+F VLG G F EV Q+ VA+K ++ ++ +L ++ H N+ A
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
L G ++ LI + ++ G L + K + RL V A ++YLH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH---DL 135
Query: 515 PIVHRDVKSSNIL---LNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
IVHRD+K N+L L+E + I+DFGLS++ E + + GTPGY+ PE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRP 596
++ D +S GV+ ++ G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 27 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 83
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 137
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 138 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 189
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 190 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 36 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 146
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 198
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 199 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 35 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 91
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 145
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 146 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 197
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 198 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 IGYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLE 506
+ E N++ L+ M + L+ +K +K +H+ + ++ +GL+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQI------LRGLK 139
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y P
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 567 EYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
E +LNW+ N+ D++S G ++ E++TGR
Sbjct: 192 E-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTALI 456
+G G +G V +VAVK LS FQ + +++LL + H N+ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
E N++ L+ M + L+ +K K +H+ + ++ +GL+Y
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCAKLTDDHVQFLIYQI------LRGLKY 136
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 137 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 188
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 189 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 42 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 152
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 153 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 204
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 205 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 42 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 98
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 152
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 153 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 204
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 205 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 IGYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLE 506
+ E N++ L+ M + L+ +K +K +H+ + ++ +GL+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQI------LRGLK 139
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y P
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 191
Query: 567 EYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
E +LNW+ N+ D++S G ++ E++TGR
Sbjct: 192 E-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 142
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 194
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 195 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 36/208 (17%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTALI 456
+G G +G V +VAVK LS FQ + +++LL + H N+ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 457 -----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEYL 508
+E N + ++ L+ +K +K +H+ + ++ +GL+Y+
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYI 161
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H I+HRD+K SN+ +NE + KI DFGL+R + D++ VA T Y PE
Sbjct: 162 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGXVA-TRWYRAPE- 212
Query: 569 YVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQVKLLM---RV-----H 448
+NFE RVLGKG FG+V + + + AVK+L Q V+ M R+ +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYL 508
H LT L + + + E++ G L +++ K + A + L +L
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ--KSRRFDEARARFYAAEIISALMFL 140
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV-AGTPGYLDPE 567
H I++RD+K N+LL+ + K+ADFG+ + + ++TA GTP Y+ PE
Sbjct: 141 H---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPE 194
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
D ++ GV+L E++ G P + EDD
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 402 FERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSS----CCFQLL--QVKLLMRVHHRNLTA 454
++ +GKG F +V + ++VAVK++ + Q L +V+++ ++H N+
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L + L+ EY + G + YL G+ + + QI ++Y H
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH--- 131
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-L 571
+ IVHRD+K+ N+LL+ + KIADFG S F++ +++ T G+P Y PE +
Sbjct: 132 QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV--GNKLDT-FCGSPPYAAPELFQGK 188
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRP 596
+ + DV+S GV+L +++G P
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 16/194 (8%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
++ LL + H N+ L + L+ E+ G L + + + H + + I
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMK 153
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK---LQAKIADFGLSRIFSIESS--DQIS 554
G+ YLH K IVHRD+K NILL K L KI DFGLS FS + D++
Sbjct: 154 QILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG 210
Query: 555 TAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNS 614
TA P L +Y NEK DV+S GV++ ++ G P + + D +
Sbjct: 211 TAYYIAPEVLKKKY------NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264
Query: 615 MLAEGDIRNIVDPS 628
D +NI D +
Sbjct: 265 YFDFNDWKNISDEA 278
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 36 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 146
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 198
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 199 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 41 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 151
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 152 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 203
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 204 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 40/212 (18%)
Query: 404 RVLGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNL 452
R +G G +G V Y L Q+VAVK LS FQ L +++LL + H N+
Sbjct: 34 RPVGSGAYGSVCSAYDARL--RQKVAVKKLSRP--FQSLIHARRTYRELRLLKHLKHENV 89
Query: 453 TALI-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQG 504
L+ IE + + + L+ +K + EH+ V +L +G
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL------LRG 143
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYL 564
L+Y+H I+HRD+K SN+ +NE + +I DFGL+R +D+ T T Y
Sbjct: 144 LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYR 195
Query: 565 DPEYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
PE +LNW+ N+ D++S G ++ E++ G+
Sbjct: 196 APE-IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAV-KMLSSSCCFQL----LQVKLLMRVHHRNLTALIGYCI 460
LG G FG+VY + +A K++ + +L +++ +L H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 461 EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
NN+ ++ E+ A G +D + + + QI V Q L+ L+Y I+HRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 521 VKSSNILLNEKLQAKIADFGLS--RIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE-- 576
+K+ NIL K+ADFG+S I+ D GTP ++ PE + +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF----IGTPYWMAPEVVMCETSKDRP 216
Query: 577 ---KSDVYSFGVVLLEIITGRRP 596
K+DV+S G+ L+E+ P
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPP 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 50 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 106
Query: 456 IGYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLE 506
+ E N++ L+ M + L+ +K +K +H+ + ++ +GL+
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQI------LRGLK 159
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y P
Sbjct: 160 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAP 211
Query: 567 EYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
E +LNW+ N+ D++S G ++ E++TGR
Sbjct: 212 E-IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 41 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 97
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 151
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 152 IHSA---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 203
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 204 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 404 RVLGKGGFGEVYHGSLDDNQ----QVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLT 453
++LG+G FG V G+L +VAVK + Q L + + H N+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 454 ALIGYCIEGNNMGL-----IYEYMASGTLDQYL------KGKKEHMLNWVERLQIAVDSA 502
L+G CIE ++ G+ I +M G L YL G K L + L+ VD A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL--LKFMVDIA 157
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA-VAGTP 561
G+EYL +HRD+ + N +L + + +ADFGLS+ I S D +A P
Sbjct: 158 LGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK--KIYSGDYYRQGRIAKMP 212
Query: 562 -GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ E KSDV++FGV + EI T
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 53 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 163
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 164 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 215
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 216 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 49 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 105
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 159
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 160 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 211
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 212 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 401 NFERVLGK-GGFGEVYHGSLDDNQQVAV-KMLSSSCCFQL----LQVKLLMRVHHRNLTA 454
+F ++G+ G FG+VY + +A K++ + +L +++ +L H N+
Sbjct: 12 DFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
L+ NN+ ++ E+ A G +D + + + QI V Q L+ L+Y
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHDN 127
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
I+HRD+K+ NIL K+ADFG+S + + Q + GTP ++ PE +
Sbjct: 128 KIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 575 NE-----KSDVYSFGVVLLEIITGRRP 596
+ K+DV+S G+ L+E+ P
Sbjct: 187 KDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALI 456
+ +GKG F +V + ++VAV+++ SSS +V+++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ L+ EY + G + YL G+ + + QI ++Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QK 132
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-LNW 573
IVHRD+K+ N+LL+ + KIADFG S F+ +++ T G+P Y PE + +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDT-FCGSPPYAAPELFQGKKY 189
Query: 574 LNEKSDVYSFGVVLLEIITGRRP 596
+ DV+S GV+L +++G P
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQ---VAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTALIG 457
LG G FG V G ++ VA+K+L + + + +++ ++ + + LIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHM--LNWVERLQIAVDSAQGLEYLHYGCKPP 515
C + + L+ E G L ++L GK+E + N E L + G++YL +
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH---QVSMGMKYLE---EKN 130
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLNWL 574
VHRD+ + N+LL + AKI+DFGLS+ + S + + P + PE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 575 NEKSDVYSFGVVLLEIIT-GRRP 596
+ +SDV+S+GV + E ++ G++P
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKP 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCFQLLQVKLLMR--VHHRNLTALIG 457
+ LG+G GEV + + VAVK M + C + ++ ++ + ++H N+ G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ EGN L EY + G L + + + + + + + G+ YLH G I
Sbjct: 72 HRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-GIG--IT 126
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLN-E 576
HRD+K N+LL+E+ KI+DFGL+ +F + +++ + GT Y+ PE + E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
DV+S G+VL ++ G P + D S W
Sbjct: 187 PVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDW 220
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E++K+ +VLG G FG VY G + D + V A+K+L + +
Sbjct: 12 RILKETELRKV-----KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEI 66
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V ++ L+G C+ + + L+ + M G L +++ + + +LNW
Sbjct: 67 LDEAYVMAGVGSPYVSRLLGICLT-STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWC 125
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
+QIA +G+ YL +VHRD+ + N+L+ KI DFGL+R+ I+ ++
Sbjct: 126 --MQIA----KGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEY 176
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 177 HADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCC------FQLL-QVKLLMRVHHRNLTAL 455
R LGKG FG VY N+ + A+K+L S QL ++++ + H N+ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGK----KEHMLNWVERLQIAVDSAQGLEYLHYG 511
Y + + L+ E+ G L + L+ ++ ++E L A LHY
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA---------LHYC 130
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
+ ++HRD+K N+L+ K + KIADFG +S+ + + GT YL PE
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+EK D++ GV+ E + G P S + +T
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 36/208 (17%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTALI 456
+G G +G V + ++AVK LS FQ + +++LL + H N+ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 457 -----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEYL 508
+E N + ++ L+ +K +K +H+ + ++ +GL+Y+
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYI 170
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 171 HSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE- 221
Query: 569 YVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N D++S G ++ E++TGR
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCC------FQLL-QVKLLMRVHHRNLTAL 455
R LGKG FG VY N+ + A+K+L S QL ++++ + H N+ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGK----KEHMLNWVERLQIAVDSAQGLEYLHYG 511
Y + + L+ E+ G L + L+ ++ ++E L A LHY
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA---------LHYC 131
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
+ ++HRD+K N+L+ K + KIADFG +S+ + + GT YL PE
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEG 187
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+EK D++ GV+ E + G P S + +T
Sbjct: 188 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 32 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 88
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 142
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 143 IHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 194
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 195 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCC------FQLL-QVKLLMRVHHRNLTAL 455
R LGKG FG VY N+ + A+K+L S QL ++++ + H N+ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 456 IGYCIEGNNMGLIYEYMASGTLDQYLKGK----KEHMLNWVERLQIAVDSAQGLEYLHYG 511
Y + + L+ E+ G L + L+ ++ ++E L A LHY
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA---------LHYC 130
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
+ ++HRD+K N+L+ K + KIADFG +S+ + + GT YL PE
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+EK D++ GV+ E + G P S + +T
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 404 RVLGKGGFGEVYHGSLDDNQ----QVAVKML-----SSSCCFQLLQVKLLMR-VHHRNLT 453
R+LGKG FG V L +VAVKML +SS + L+ M+ H ++
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 454 ALIGYCIEGNNMG------LIYEYMASGTLDQYLK----GKKEHMLNWVERLQIAVDSAQ 503
L+G + G +I +M G L +L G+ L ++ VD A
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGT--P 561
G+EYL +HRD+ + N +L E + +ADFGLSR I S D A
Sbjct: 149 GMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSR--KIYSGDYYRQGCASKLPV 203
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPV--ISRAEDDTTHISQWVNSMLAE 618
+L E N SDV++FGV + EI+T G+ P I AE + + L
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---------IYNYLIG 254
Query: 619 GDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLMELKECLS 671
G+ ++ +D L C S +RP+ T + MEL+ L
Sbjct: 255 GNRLKQPPECMEEVYD---------LMYQCWSADPKQRPSFTCLRMELENILG 298
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 40/210 (19%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 IGYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLE 506
+ E N++ L+ M + L+ +K +K +H+ + ++ +GL+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKSQKLTDDHVQFLIYQI------LRGLK 139
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H I+HRD+K SN+ +NE + KI DFGL R +D T T Y P
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRAP 191
Query: 567 EYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
E +LNW+ N+ D++S G ++ E++TGR
Sbjct: 192 E-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 53 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 109
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 163
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R + D++ VA T Y PE
Sbjct: 164 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGYVA-TRWYRAPE 215
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 216 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 36 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 92
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 146
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 147 IHSA---DIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 198
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 199 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 101/205 (49%), Gaps = 25/205 (12%)
Query: 405 VLGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
++G GGFG+V+ D + +K + + +VK L ++ H N+ G C +G
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDGF 76
Query: 464 N-----------------MGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLE 506
+ + + E+ GTL+Q+++ ++ L+ V L++ +G++
Sbjct: 77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVD 136
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H +++RD+K SNI L + Q KI DFGL + S++ +D GT Y+ P
Sbjct: 137 YIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLK-NDGKRXRSKGTLRYMSP 190
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEII 591
E ++ D+Y+ G++L E++
Sbjct: 191 EQISSQDYGKEVDLYALGLILAELL 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 15/191 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGL--IYEYMASGTLDQYL-KGKKEHM-LNWVERL 495
+V LL + H N+ I+ N L + EY G L + KG KE L+ L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 496 QIAVDSAQGLEYLHYGCK--PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
++ L+ H ++HRD+K +N+ L+ K K+ DFGL+RI + ++S
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--F 172
Query: 554 STAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVN 613
+ A GTP Y+ PE NEKSD++S G +L E+ P + ++ + +
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-------LA 225
Query: 614 SMLAEGDIRNI 624
+ EG R I
Sbjct: 226 GKIREGKFRRI 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSS----CCFQLL--QVKLLMRVHHRNLTALI 456
+ +GKG F +V + ++VA+K++ + Q L +V+++ ++H N+ L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ LI EY + G + YL G+ + + QI ++Y H +
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH---QK 133
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-LNW 573
IVHRD+K+ N+LL+ + KIADFG S F++ A G P Y PE + +
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKY 190
Query: 574 LNEKSDVYSFGVVLLEIITGRRP 596
+ DV+S GV+L +++G P
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQVAVKM--------LSSSCCFQL 438
R +E +KI +VLG G FG VY G + + ++V + + S ++
Sbjct: 44 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEI 98
Query: 439 L-QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 99 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 156
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 157 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 208
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 209 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI D+GL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 148/310 (47%), Gaps = 47/310 (15%)
Query: 390 FAYSEIQKITNNFERV--LGKGGFGEVYHGSLDDNQQV--AVKML-----SSSCCFQLLQ 440
F S+ ++ ++RV LG G +GEV D V A+K++ S+S +LL+
Sbjct: 27 FITSKKGHLSEMYQRVKKLGSGAYGEVLL-CRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 441 -VKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWVERLQIA 498
V +L + H N+ L + + N L+ E G L D+ + K N V+ I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK---FNEVDAAVII 142
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQ---AKIADFGLSRIFSIESSDQIST 555
G+ YLH K IVHRD+K N+LL K + KI DFGLS +F E+ ++
Sbjct: 143 KQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMKE 197
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD----------T 605
+ GT Y+ PE + +EK DV+S GV+L ++ G P + + + T
Sbjct: 198 RL-GTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT 255
Query: 606 THISQWVNSMLAEGDIRNIVDPSLQGNFDNN---SAWKAVE---LALACASHTSS-ERPT 658
+W N ++EG ++++ LQ FD+ SA +A+E + C+ S E P+
Sbjct: 256 FDSPEWKN--VSEG-AKDLIKQMLQ--FDSQRRISAQQALEHPWIKEMCSKKESGIELPS 310
Query: 659 MTDVLMELKE 668
+ + + +++
Sbjct: 311 LANAIENMRK 320
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 405 VLGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
++G GGFG+V+ D + ++ + + +VK L ++ H N+ G C +G
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWDGF 77
Query: 464 N------------------------------MGLIYEYMASGTLDQYLKGKKEHMLNWVE 493
+ + + E+ GTL+Q+++ ++ L+ V
Sbjct: 78 DYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 137
Query: 494 RLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
L++ +G++Y+H ++HRD+K SNI L + Q KI DFGL + S++ +D
Sbjct: 138 ALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGL--VTSLK-NDGK 191
Query: 554 STAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEII 591
T GT Y+ PE ++ D+Y+ G++L E++
Sbjct: 192 RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 397 KITN-NFERVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
K+T+ NF VLGKG FG+V ++ AVK+L Q V+ M V R L A
Sbjct: 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVL-A 396
Query: 455 LIGY---------CIEG-NNMGLIYEYMASGTL----DQYLKGKKEHMLNWVERLQIAVD 500
L G C + + + + EY+ G L Q + K+ H + + A +
Sbjct: 397 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAE 450
Query: 501 SAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA-VAG 559
A GL +L I++RD+K N++L+ + KIADFG+ + D ++T G
Sbjct: 451 IAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE---NIWDGVTTKXFCG 504
Query: 560 TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
TP Y+ PE + D ++FGV+L E++ G+ P ED+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALI 456
+ +GKG F +V + ++VAVK++ SSS +V++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ L+ EY + G + YL G+ + + QI ++Y H +
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYCH---QK 132
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-LNW 573
IVHRD+K+ N+LL+ KIADFG S F+ + A G P Y PE + +
Sbjct: 133 FIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKY 189
Query: 574 LNEKSDVYSFGVVLLEIITGRRP 596
+ DV+S GV+L +++G P
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 21/202 (10%)
Query: 406 LGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQLLQVKLLMR-------VHHRNLTALIG 457
LG G FG+V G + +VAVK+L+ L V + R H ++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+++ ++ EY++ G L Y+ K L+ E ++ G++Y H + +V
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCH---RHMVV 138
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN---WL 574
HRD+K N+LL+ + AKIADFGLS + S + G+P Y PE V++ +
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRXSCGSPNYAAPE--VISGRLYA 193
Query: 575 NEKSDVYSFGVVLLEIITGRRP 596
+ D++S GV+L ++ G P
Sbjct: 194 GPEVDIWSSGVILYALLCGTLP 215
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 31/225 (13%)
Query: 397 KITN-NFERVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
K+T+ NF VLGKG FG+V ++ AVK+L Q V+ M V R L A
Sbjct: 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTM-VEKRVL-A 75
Query: 455 LIGY---------CIEG-NNMGLIYEYMASGTL----DQYLKGKKEHMLNWVERLQIAVD 500
L G C + + + + EY+ G L Q + K+ H + + A +
Sbjct: 76 LPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------AAE 129
Query: 501 SAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA-VAG 559
A GL +L I++RD+K N++L+ + KIADFG+ + D ++T G
Sbjct: 130 IAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE---NIWDGVTTKXFCG 183
Query: 560 TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDD 604
TP Y+ PE + D ++FGV+L E++ G+ P ED+
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 34/219 (15%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKML--------SSSCCFQLLQVKLLMRVHHRNLTA 454
+V+G+G FGEV L + +V A+K+L + + CF+ + +L+ + +T
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFRE-ERDVLVNGDSKWITT 138
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVER-----LQIAVDSAQGLEYLH 509
L + NN+ L+ +Y G L L ++ + + R + IA+DS L Y
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY-- 196
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
VHRD+K NIL++ ++ADFG + + Q S AV GTP Y+ PE
Sbjct: 197 -------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPE-- 246
Query: 570 VLNWL-------NEKSDVYSFGVVLLEIITGRRPVISRA 601
+L + + D +S GV + E++ G P + +
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 12 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW- 124
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFG +++ E +
Sbjct: 125 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 12 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW- 124
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFG +++ E +
Sbjct: 125 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 114/223 (51%), Gaps = 34/223 (15%)
Query: 387 SRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQ-----VAVKML---SSSCCFQL 438
+R F +E++K+ +VLG G FG V+ G + V +K++ S FQ
Sbjct: 25 ARIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA 79
Query: 439 LQVKLLM--RVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNW 491
+ +L + H ++ L+G C G+++ L+ +Y+ G+L +++ + + +LNW
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 138
Query: 492 VERLQIAVDSAQGLEYLH-YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESS 550
V A+G+ YL +G +VHR++ + N+LL Q ++ADFG++ + +
Sbjct: 139 ------GVQIAKGMYYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 188
Query: 551 DQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
Q+ + A TP ++ E +SDV+S+GV + E++T
Sbjct: 189 -QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 14 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 68
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW- 126
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFG +++ E +
Sbjct: 127 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 178
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 179 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 12 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 124
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFG +++ E +
Sbjct: 125 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 176
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 177 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VL G FG VY G + + ++V A+K L + +
Sbjct: 17 RILKETEFKKI-----KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 71
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW- 129
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 130 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 36/231 (15%)
Query: 394 EIQKITNNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML--------SSSCCFQLLQVK 442
E+Q +FE +V+G+G FGEV + + +++ A+K+L + + CF+ +
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFRE-ERD 126
Query: 443 LLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI----- 497
+L+ + +TAL + N++ L+ +Y G L L ++ + + R I
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
A+DS L Y VHRD+K N+LL+ ++ADFG + + + Q S AV
Sbjct: 187 AIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 558 AGTPGYLDPEYYVLNWLNE-------KSDVYSFGVVLLEIITGRRPVISRA 601
GTP Y+ PE +L + + + D +S GV + E++ G P + +
Sbjct: 238 -GTPDYISPE--ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 285
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 10 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 122
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFG +++ E +
Sbjct: 123 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 174
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 36/231 (15%)
Query: 394 EIQKITNNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML--------SSSCCFQLLQVK 442
E+Q +FE +V+G+G FGEV + + +++ A+K+L + + CF+ +
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFRE-ERD 142
Query: 443 LLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI----- 497
+L+ + +TAL + N++ L+ +Y G L L ++ + + R I
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
A+DS L Y VHRD+K N+LL+ ++ADFG + + + Q S AV
Sbjct: 203 AIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 558 AGTPGYLDPEYYVLNWLNE-------KSDVYSFGVVLLEIITGRRPVISRA 601
GTP Y+ PE +L + + + D +S GV + E++ G P + +
Sbjct: 254 -GTPDYISPE--ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 301
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 404 RVLGKGGFGEVYH----GSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRN 451
RVLGKGG+G+V+ + + A+K+L + + + +L V H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 452 LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
+ LI G + LI EY++ G L +++ ++E + + + L +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLH-- 138
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
+ I++RD+K NI+LN + K+ DFGL + SI ++ GT Y+ PE +
Sbjct: 139 -QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDG-TVTHTFCGTIEYMAPEILMR 195
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRP 596
+ N D +S G ++ +++TG P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALI 456
+ +GKG F +V + ++VAV+++ SSS +V+++ ++H N+ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ L+ EY + G + YL G+ + + QI ++Y H +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH---QK 132
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-LNW 573
IVHRD+K+ N+LL+ + KIADFG S F+ + G+P Y PE + +
Sbjct: 133 FIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKY 189
Query: 574 LNEKSDVYSFGVVLLEIITGRRP 596
+ DV+S GV+L +++G P
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSS----CCFQLL--QVKLLMRVHHRNLTALI 456
+ +GKG F +V + ++VA+K++ + Q L +V+++ ++H N+ L
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ LI EY + G + YL G+ + + QI ++Y H +
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH---QK 130
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV-LNW 573
IVHRD+K+ N+LL+ + KIADFG S F++ ++ T G+P Y PE + +
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV--GGKLDT-FCGSPPYAAPELFQGKKY 187
Query: 574 LNEKSDVYSFGVVLLEIITGRRP 596
+ DV+S GV+L +++G P
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLP 210
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VLG G FG VY G + + ++V A+K L + +
Sbjct: 17 RILKETEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 71
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 129
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFG +++ E +
Sbjct: 130 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEY 181
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VL G FG VY G + + ++V A+K L + +
Sbjct: 10 RILKETEFKKI-----KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 122
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 123 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 31/225 (13%)
Query: 388 RQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQV----AVKMLSSSCCFQ----- 437
R +E +KI +VL G FG VY G + + ++V A+K L + +
Sbjct: 17 RILKETEFKKI-----KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 71
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNWV 492
L + ++ V + ++ L+G C+ + + LI + M G L Y++ K +++LNW
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW- 129
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
V A+G+ YL +VHRD+ + N+L+ KI DFGL+++ E +
Sbjct: 130 -----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 181
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ E + +SDV+S+GV + E++T G +P
Sbjct: 182 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 406 LGKGGFGEVYHGS--LDDN----QQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYC 459
LG+G + VY G L DN +++ ++ + C + +V LL + H N+ L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
++ L++EY LD+ LK + N + + + Q L L Y + ++HR
Sbjct: 70 HTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNW-LNEKS 578
D+K N+L+NE+ + K+ADFGL+R SI + + V T Y P+ + + + +
Sbjct: 125 DLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYSTQI 182
Query: 579 DVYSFGVVLLEIITGR 594
D++ G + E+ TGR
Sbjct: 183 DMWGVGCIFYEMATGR 198
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 114/223 (51%), Gaps = 34/223 (15%)
Query: 387 SRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDNQQ-----VAVKML---SSSCCFQL 438
+R F +E++K+ +VLG G FG V+ G + V +K++ S FQ
Sbjct: 7 ARIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA 61
Query: 439 LQVKLLM--RVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKK-----EHMLNW 491
+ +L + H ++ L+G C G+++ L+ +Y+ G+L +++ + + +LNW
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 120
Query: 492 VERLQIAVDSAQGLEYLH-YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESS 550
V A+G+ YL +G +VHR++ + N+LL Q ++ADFG++ + +
Sbjct: 121 ------GVQIAKGMYYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170
Query: 551 DQISTAVAGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
Q+ + A TP ++ E +SDV+S+GV + E++T
Sbjct: 171 -QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 405 VLGKGGFGEVYHGSLDDNQ-QVAVKMLSS--SCCFQLLQVKLLMRVH--HRNLTALIGYC 459
VLGKG +G VY G NQ ++A+K + S Q L ++ + H H+N+ +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGK------KEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
E + + E + G+L L+ K E + + + QI +GL+YLH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QIL----EGLKYLH---D 140
Query: 514 PPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
IVHRD+K N+L+N KI+DFG S+ + + + GT Y+ PE
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 573 --WLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ +D++S G ++E+ TG+ P E
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPFYELGE 230
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 19/205 (9%)
Query: 404 RVLGKGGFGEVYH----GSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRN 451
RVLGKGG+G+V+ + + A+K+L + + + +L V H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 452 LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
+ LI G + LI EY++ G L +++ ++E + + + L +LH
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLH-- 138
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
+ I++RD+K NI+LN + K+ DFGL + SI ++ GT Y+ PE +
Sbjct: 139 -QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDG-TVTHXFCGTIEYMAPEILMR 195
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRP 596
+ N D +S G ++ +++TG P
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQ---VAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTALIG 457
LG G FG V G ++ VA+K+L + + + +++ ++ + + LIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHML--NWVERLQIAVDSAQGLEYLHYGCKPP 515
C + + L+ E G L ++L GK+E + N E L + G++YL +
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLH---QVSMGMKYLE---EKN 456
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLNWL 574
VHR++ + N+LL + AKI+DFGLS+ + S + + P + PE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 575 NEKSDVYSFGVVLLEIIT-GRRP 596
+ +SDV+S+GV + E ++ G++P
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKP 539
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 404 RVLGKGGFGEVYHGSLD-----DNQQVAVKMLSSSCCFQLL-----QVKLLMRVHHRNLT 453
R LG+G FG+V D + VAVK L C QL ++++L ++H ++
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 454 ALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G C + ++ L+ EY+ G+L YL H + + L A +G+ YLH
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP---RHCVGLAQLLLFAQQICEGMAYLH-- 129
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG-TPGYLDPEYYV 570
+HR + + N+LL+ KI DFGL++ E + G +P + +Y
Sbjct: 130 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVF----WYA 183
Query: 571 LNWLNE-----KSDVYSFGVVLLEIIT 592
L E SDV+SFGV L E++T
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 40/210 (19%)
Query: 406 LGKGGFGEVYHGSLDDN--QQVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 IGYCI------EGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLE 506
+ E N++ L+ M + L+ +K +K +H+ + ++ +GL+
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQI------LRGLK 139
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
Y+H I+HRD+K SN+ +NE + KI DF L+R +D T T Y P
Sbjct: 140 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRWYRAP 191
Query: 567 EYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
E +LNW+ N+ D++S G ++ E++TGR
Sbjct: 192 E-IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 404 RVLGKGGFGEVYHGSLD-----DNQQVAVKMLSSSCCFQLL-----QVKLLMRVHHRNLT 453
R LG+G FG+V D + VAVK L C QL ++++L ++H ++
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 454 ALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G C + ++ L+ EY+ G+L YL H + + L A +G+ YLH
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLP---RHCVGLAQLLLFAQQICEGMAYLH-- 128
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG-TPGYLDPEYYV 570
+HR + + N+LL+ KI DFGL++ E + G +P + +Y
Sbjct: 129 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVF----WYA 182
Query: 571 LNWLNE-----KSDVYSFGVVLLEIIT 592
L E SDV+SFGV L E++T
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 406 LGKGGFGEVYHGSLDD--NQQVAVKMLSSSCCFQLL------QVKLLMRVHHRNLTALIG 457
+G G +G V ++D ++VA+K LS ++ ++ LL + H N+ L+
Sbjct: 50 VGSGAYGSVC-SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV-DSAQGLEYLHYGCKPPI 516
+++ Y++ Q K M E++Q V +GL+Y+H +
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---V 165
Query: 517 VHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL-- 574
VHRD+K N+ +NE + KI DFGL+R +D T T Y PE +L+W+
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPE-VILSWMHY 219
Query: 575 NEKSDVYSFGVVLLEIITGR 594
N+ D++S G ++ E++TG+
Sbjct: 220 NQTVDIWSVGCIMAEMLTGK 239
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 37/230 (16%)
Query: 400 NNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQ-------LLQVKLLMRVHH 449
++FE R +GKG FG+V +D +++ A+K ++ C + +++++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKG----KKEHMLNWVERLQIAVDSAQGL 505
L L + +M ++ + + G L +L+ K+E + ++ L +A+D Q
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
I+HRD+K NILL+E I DF ++ + E+ QI+T +AGT Y+
Sbjct: 135 R---------IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET--QITT-MAGTKPYMA 182
Query: 566 PEYYVLNWLNEKSDVYSF-------GVVLLEIITGRRPVISRAEDDTTHI 608
PE + + K YSF GV E++ GRRP R+ + I
Sbjct: 183 PEMFS----SRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 15/191 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGL--IYEYMASGTLDQYL-KGKKEHM-LNWVERL 495
+V LL + H N+ I+ N L + EY G L + KG KE L+ L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 496 QIAVDSAQGLEYLHYGCK--PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
++ L+ H ++HRD+K +N+ L+ K K+ DFGL+RI + ++S
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--F 172
Query: 554 STAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVN 613
+ GTP Y+ PE NEKSD++S G +L E+ P + ++ + +
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-------LA 225
Query: 614 SMLAEGDIRNI 624
+ EG R I
Sbjct: 226 GKIREGKFRRI 236
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI FGL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 405 VLGKGGFGEVYHGSLDDNQ-QVAVKMLSS--SCCFQLLQVKLLMRVH--HRNLTALIGYC 459
VLGKG +G VY G NQ ++A+K + S Q L ++ + H H+N+ +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGK------KEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
E + + E + G+L L+ K E + + + QI +GL+YLH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-QIL----EGLKYLH---D 126
Query: 514 PPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
IVHRD+K N+L+N KI+DFG S+ + + + GT Y+ PE
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQYMAPEIIDKG 184
Query: 573 --WLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ +D++S G ++E+ TG+ P E
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPPFYELGE 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 39/274 (14%)
Query: 406 LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQ-----LLQVKLLMRVHHRNLTA-LIGY 458
LG+G +G V + Q +AVK + ++ Q L+ + + MR T G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 459 CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERL--QIAVDSAQGLEYLHYGCKPPI 516
++ + E M + +LD++ K + E + +IAV + LE+LH K +
Sbjct: 119 LFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLSV 175
Query: 517 VHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV-AGTPGYLDPEYYVLNWLN 575
+HRDVK SN+L+N Q K+ DFG+S D ++ + AG Y+ PE + LN
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDAGCKPYMAPE-RINPELN 230
Query: 576 E-----KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV-DPSL 629
+ KSD++S G+ ++E+ R P S W ++ +V +PS
Sbjct: 231 QKGYSVKSDIWSLGITMIELAILRFPYDS-----------WGTPF---QQLKQVVEEPSP 276
Query: 630 QGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
Q D SA + V+ C S ERPT +++
Sbjct: 277 QLPADKFSA-EFVDFTSQCLKKNSKERPTYPELM 309
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 25/221 (11%)
Query: 400 NNFE--RVLGKGGFGEVYH----GSLDDNQQVAVKMLSSSCCFQLLQVK------LLMRV 447
++FE +VLG+G FG+V+ D A+K+L + +V+ +L V
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 448 HHRNLTAL-IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLE 506
+H + L + EG + LI +++ G D + + KE M + + A GL+
Sbjct: 88 NHPFVVKLHYAFQTEGK-LYLILDFLRGG--DLFTRLSKEVMFTEEDVKFYLAELALGLD 144
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA--GTPGYL 564
+LH I++RD+K NILL+E+ K+ DFGLS+ E+ D A + GT Y+
Sbjct: 145 HLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----EAIDHEKKAYSFCGTVEYM 197
Query: 565 DPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
PE + +D +S+GV++ E++TG P + +T
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKET 238
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 401 NFERVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQLLQVK--------LLMRVHHRN 451
+F +V+GKG FG+V + AVK+L + + K LL V H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 452 LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
L L + + + +Y+ G L +L+ ++ L R A + A L YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQ-RERCFLEPRARF-YAAEIASALGYLHSL 158
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
IV+RD+K NILL+ + + DFGL + +IE + ST GTP YL PE
Sbjct: 159 N---IVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTST-FCGTPEYLAPEVLHK 213
Query: 572 NWLNEKSDVYSFGVVLLEIITGRRPVISR 600
+ D + G VL E++ G P SR
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 406 LGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
LG G FG V G D VAVK L Q + +V + + HRNL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH-MLNWVERLQIAVDSAQGLEYLHYGCK 513
L G + M ++ E G+L L+ + H +L + R AV A+G+ YL
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLN 572
+HRD+ + N+LL + KI DFGL R + P + PE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 573 WLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQG 631
+ SD + FGV L E+ T G+ P I + SQ ++ + EG+ + Q
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIG------LNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 632 NFDNNSAWKAVELALACASHTSSERPT---MTDVLME 665
++ + + C +H +RPT + D L+E
Sbjct: 244 IYN---------VMVQCWAHKPEDRPTFVALRDFLLE 271
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI D GL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 398 ITNNFERV--LGKGGFGEVYHG-SLDDNQQVAVKMLSSS------CCFQLLQVKLLMRVH 448
+ +E++ +G+G +G V+ + D Q VA+K S L ++++L ++
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
H NL L+ + L++EY L D+Y +G EH++ I + Q +
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----SITWQTLQAV 115
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
+ H K +HRDVK NIL+ + K+ DFG +R+ + SD VA T Y
Sbjct: 116 NFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVA-TRWYRS 170
Query: 566 PEYYVLN-WLNEKSDVYSFGVVLLEIITG 593
PE V + DV++ G V E+++G
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 406 LGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
LG G FG V G D VAVK L Q + +V + + HRNL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH-MLNWVERLQIAVDSAQGLEYLHYGCK 513
L G + M ++ E G+L L+ + H +L + R AV A+G+ YL
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLN 572
+HRD+ + N+LL + KI DFGL R + P + PE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 573 WLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQG 631
+ SD + FGV L E+ T G+ P I + SQ ++ + EG+ + Q
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIG------LNGSQILHKIDKEGERLPRPEDCPQD 247
Query: 632 NFDNNSAWKAVELALACASHTSSERPT---MTDVLME 665
++ + + C +H +RPT + D L+E
Sbjct: 248 IYN---------VMVQCWAHKPEDRPTFVALRDFLLE 275
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 23/217 (10%)
Query: 395 IQKITNNFERVLGKGGFGEVYHGSLDDNQQVAVKMLSSSC-CFQLLQVKLLMRVHHRNLT 453
+ KI+ + VLG G G + + + DN+ VAVK + C F +V+LL R +
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLL-RESDEHPN 79
Query: 454 ALIGYCIEGNNMGLIYEYMA----SGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+ +C E + ++Y+A + TL +Y++ K L +E + + + GL +LH
Sbjct: 80 VIRYFCTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLG-LEPITLLQQTTSGLAHLH 135
Query: 510 YGCKPPIVHRDVKSSNILL-----NEKLQAKIADFGLSRIFSI-ESSDQISTAVAGTPGY 563
IVHRD+K NIL+ + K++A I+DFGL + ++ S + V GT G+
Sbjct: 136 ---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 564 LDPEYYVLNWLNEKS---DVYSFGVVLLEIIT-GRRP 596
+ PE + + D++S G V +I+ G P
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 406 LGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
LG G FG V G D VAVK L Q + +V + + HRNL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH-MLNWVERLQIAVDSAQGLEYLHYGCK 513
L G + M ++ E G+L L+ + H +L + R AV A+G+ YL
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLN 572
+HRD+ + N+LL + KI DFGL R + P + PE
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 573 WLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQG 631
+ SD + FGV L E+ T G+ P I + SQ ++ + EG+ + Q
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIG------LNGSQILHKIDKEGERLPRPEDCPQD 253
Query: 632 NFDNNSAWKAVELALACASHTSSERPT---MTDVLME 665
++ + + C +H +RPT + D L+E
Sbjct: 254 IYN---------VMVQCWAHKPEDRPTFVALRDFLLE 281
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 37/273 (13%)
Query: 406 LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQ-----LLQVKLLMRVHHRNLTA-LIGY 458
LG+G +G V + Q +AVK + ++ Q L+ + + MR T G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 459 CIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERL--QIAVDSAQGLEYLHYGCKPPI 516
++ + E M + +LD++ K + E + +IAV + LE+LH K +
Sbjct: 75 LFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLSV 131
Query: 517 VHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE 576
+HRDVK SN+L+N Q K+ DFG+S + + I AG Y+ PE + LN+
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID---AGCKPYMAPE-RINPELNQ 187
Query: 577 -----KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIV-DPSLQ 630
KSD++S G+ ++E+ R P S T Q ++ +V +PS Q
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWG----TPFQQ----------LKQVVEEPSPQ 233
Query: 631 GNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
D SA + V+ C S ERPT +++
Sbjct: 234 LPADKFSA-EFVDFTSQCLKKNSKERPTYPELM 265
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI D GL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 406 LGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
LG G FG V G D VAVK L Q + +V + + HRNL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH-MLNWVERLQIAVDSAQGLEYLHYGCK 513
L G + M ++ E G+L L+ + H +L + R AV A+G+ YL
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLN 572
+HRD+ + N+LL + KI DFGL R + P + PE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 573 WLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQG 631
+ SD + FGV L E+ T G+ P I + SQ ++ + EG+ + Q
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIG------LNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 632 NFDNNSAWKAVELALACASHTSSERPT---MTDVLME 665
++ + + C +H +RPT + D L+E
Sbjct: 244 IYN---------VMVQCWAHKPEDRPTFVALRDFLLE 271
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 406 LGKGGFGEVYHGSLDD--NQQVAVKMLSSSCCFQLL------QVKLLMRVHHRNLTALIG 457
+G G +G V ++D ++VA+K LS ++ ++ LL + H N+ L+
Sbjct: 32 VGSGAYGSVC-SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV-DSAQGLEYLHYGCKPPI 516
+++ Y++ Q K + E++Q V +GL+Y+H +
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---V 147
Query: 517 VHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL-- 574
VHRD+K N+ +NE + KI DFGL+R +D T T Y PE +L+W+
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPE-VILSWMHY 201
Query: 575 NEKSDVYSFGVVLLEIITGR 594
N+ D++S G ++ E++TG+
Sbjct: 202 NQTVDIWSVGCIMAEMLTGK 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI D GL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LNW+ N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 17/219 (7%)
Query: 395 IQKITNNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSC------CFQLLQVKLLMR 446
Q + ++++ +G+G +G VY + VA+K + + ++ LL
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 447 VHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLE 506
+HH N+ +LI + L++E+M ++ LK + ++ QI + Q L
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
+ + + I+HRD+K N+L+N K+ADFGL+R F I V T Y P
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAP 188
Query: 567 EYYVLNWLNEKS-DVYSFGVVLLEIITGRRPVISRAEDD 604
+ + + S D++S G + E+ITG +P+ DD
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDD 226
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 406 LGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
LG G FG V G D VAVK L Q + +V + + HRNL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH-MLNWVERLQIAVDSAQGLEYLHYGCK 513
L G + M ++ E G+L L+ + H +L + R AV A+G+ YL
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLN 572
+HRD+ + N+LL + KI DFGL R + P + PE
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 573 WLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQG 631
+ SD + FGV L E+ T G+ P I + SQ ++ + EG+ + Q
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEPWIG------LNGSQILHKIDKEGERLPRPEDCPQD 253
Query: 632 NFDNNSAWKAVELALACASHTSSERPT---MTDVLME 665
++ + + C +H +RPT + D L+E
Sbjct: 254 IYN---------VMVQCWAHKPEDRPTFVALRDFLLE 281
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 396 QKITNNFERV--LGKGGFGEVYHGSLDDNQQVAVKMLSSSC------CFQLLQVKLLMRV 447
Q + ++++ +G+G +G VY + VA+K + + ++ LL +
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
HH N+ +LI + L++E+M ++ LK + ++ QI + Q L
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+ + + I+HRD+K N+L+N K+ADFGL+R F I V T Y P+
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPD 189
Query: 568 YYVLNWLNEKS-DVYSFGVVLLEIITGRRPVISRAEDD 604
+ + S D++S G + E+ITG +P+ DD
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDD 226
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 404 RVLGKGGFGEVYHGSLD-----DNQQVAVKMLSSSCCFQL-----LQVKLLMRVHHRNLT 453
R LG+G FG+V D + VAVK L + C Q ++ +L ++H ++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 454 ALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G C + ++ L+ EY+ G+L YL H + + L A +G+ YLH
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLH-- 134
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG-TPGYLDPEYYV 570
+HR++ + N+LL+ KI DFGL++ E + G +P + +Y
Sbjct: 135 -SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVF----WYA 188
Query: 571 LNWLNE-----KSDVYSFGVVLLEIIT 592
L E SDV+SFGV L E++T
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 406 LGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
LG G FG V G D VAVK L Q + +V + + HRNL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH-MLNWVERLQIAVDSAQGLEYLHYGCK 513
L G + M ++ E G+L L+ + H +L + R AV A+G+ YL
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLN 572
+HRD+ + N+LL + KI DFGL R + P + PE
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 573 WLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQG 631
+ SD + FGV L E+ T G+ P I + SQ ++ + EG+ + Q
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPWIG------LNGSQILHKIDKEGERLPRPEDCPQD 247
Query: 632 NFDNNSAWKAVELALACASHTSSERPT---MTDVLME 665
++ + + C +H +RPT + D L+E
Sbjct: 248 IYN---------VMVQCWAHKPEDRPTFVALRDFLLE 275
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 404 RVLGKGGFGEVYHGSLD-----DNQQVAVKMLSSSCCFQL-----LQVKLLMRVHHRNLT 453
R LG+G FG+V D + VAVK L + C Q ++ +L ++H ++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 454 ALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G C + ++ L+ EY+ G+L YL H + + L A +G+ YLH
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLH-- 134
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAG-TPGYLDPEYYV 570
+HR++ + N+LL+ KI DFGL++ E + G +P + +Y
Sbjct: 135 -AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVF----WYA 188
Query: 571 LNWLNE-----KSDVYSFGVVLLEIIT 592
L E SDV+SFGV L E++T
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 24/213 (11%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKMLS-------SSCCFQLLQVKLLMRVHHRNLTALIGY 458
LG G + VY G L+ V V + + + ++ L+ + H N+ L
Sbjct: 13 LGNGTYATVYKG-LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 459 CIEGNNMGLIYEYMASGTLDQYLKGK------KEHMLNWVERLQIAVDSAQGLEYLHYGC 512
N + L++E+M L +Y+ + + LN V+ Q + QGL + H
Sbjct: 72 IHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCH--- 125
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
+ I+HRD+K N+L+N++ Q K+ DFGL+R F I + S V T Y P+ + +
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRAPDVLMGS 183
Query: 573 WLNEKS-DVYSFGVVLLEIITGRRPVISRAEDD 604
S D++S G +L E+ITG +P+ D+
Sbjct: 184 RTYSTSIDIWSCGCILAEMITG-KPLFPGTNDE 215
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 406 LGKGGFGEVYHGSLD----DNQQVAVKMLSSSCCFQ-------LLQVKLLMRVHHRNLTA 454
LG G FG V G D VAVK L Q + +V + + HRNL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEH-MLNWVERLQIAVDSAQGLEYLHYGCK 513
L G + M ++ E G+L L+ + H +L + R AV A+G+ YL
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP-GYLDPEYYVLN 572
+HRD+ + N+LL + KI DFGL R + P + PE
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 573 WLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQG 631
+ SD + FGV L E+ T G+ P I + SQ ++ + EG+ + Q
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPWIG------LNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 632 NFDNNSAWKAVELALACASHTSSERPT---MTDVLME 665
++ + + C +H +RPT + D L+E
Sbjct: 244 IYN---------VMVQCWAHKPEDRPTFVALRDFLLE 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 97/197 (49%), Gaps = 20/197 (10%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAV-KMLSSSCCFQL----LQVKLLMRVHHRNLTALIGYCI 460
LG G FG+VY + +A K++ + +L +++++L H + L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 461 EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
+ ++ E+ G +D + + + QI V Q LE L++ I+HRD
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIML----ELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRD 142
Query: 521 VKSSNILLNEKLQAKIADFGLS--RIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE-- 576
+K+ N+L+ + ++ADFG+S + +++ D + GTP ++ PE + + +
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFIGTPYWMAPEVVMCETMKDTP 198
Query: 577 ---KSDVYSFGVVLLEI 590
K+D++S G+ L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAV-KMLSSSCCFQL----LQVKLLMRVHHRNLTALIGYCI 460
LG G FG+VY + +A K++ + +L +++++L H + L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 461 EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
+ ++ E+ G +D + + + QI V Q LE L++ I+HRD
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIML----ELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRD 134
Query: 521 VKSSNILLNEKLQAKIADFGLS--RIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE-- 576
+K+ N+L+ + ++ADFG+S + +++ D + GTP ++ PE + + +
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFIGTPYWMAPEVVMCETMKDTP 190
Query: 577 ---KSDVYSFGVVLLEIITGRRP 596
K+D++S G+ L+E+ P
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPP 213
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGL--IYEYMASGTLDQYL-KGKKEHM-LNWVERL 495
+V LL + H N+ I+ N L + EY G L + KG KE L+ L
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 496 QIAVDSAQGLEYLHYGCK--PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
++ L+ H ++HRD+K +N+ L+ K K+ DFGL+RI + +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN--HDEDF 172
Query: 554 STAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVN 613
+ GTP Y+ PE NEKSD++S G +L E+ P + ++ + +
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE-------LA 225
Query: 614 SMLAEGDIRNI 624
+ EG R I
Sbjct: 226 GKIREGKFRRI 236
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 401 NFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQ-----LLQVKLLMRV-H 448
+F + LG G FG+V + D VAVKML S + ++K+L + +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML----------------NWV 492
H N+ L+G C G +I EY G L +L+ K++ + +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
+ L + A+G+ +L +HRD+ + NILL KI DFGL+R +S+
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
+ ++ PE +SDV+S+G+ L E+ +
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 401 NFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQ-----LLQVKLLMRV-H 448
+F + LG G FG+V + D VAVKML S + ++K+L + +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML----------------NWV 492
H N+ L+G C G +I EY G L +L+ K++ + +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
+ L + A+G+ +L +HRD+ + NILL KI DFGL+R +S+
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
+ ++ PE +SDV+S+G+ L E+ +
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 39/246 (15%)
Query: 395 IQKITNNF--ERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKL----LMRV 447
I N+F R++G+GGFGEVY D + A+K C ++K+ + +
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK------CLDKKRIKMKQGETLAL 236
Query: 448 HHRNLTALIG-------YCIE-----GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERL 495
+ R + +L+ C+ + + I + M G L +L + + + +
Sbjct: 237 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMR 294
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A + GLE++H +V+RD+K +NILL+E +I+D GL+ FS +
Sbjct: 295 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---- 347
Query: 556 AVAGTPGYLDPEYYVLN---WLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
A GT GY+ PE VL + +D +S G +L +++ G P D I +
Sbjct: 348 ASVGTHGYMAPE--VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 405
Query: 613 NSMLAE 618
+M E
Sbjct: 406 LTMAVE 411
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 39/246 (15%)
Query: 395 IQKITNNF--ERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKL----LMRV 447
I N+F R++G+GGFGEVY D + A+K C ++K+ + +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK------CLDKKRIKMKQGETLAL 237
Query: 448 HHRNLTALIG-------YCIE-----GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERL 495
+ R + +L+ C+ + + I + M G L +L + + + +
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMR 295
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A + GLE++H +V+RD+K +NILL+E +I+D GL+ FS +
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---- 348
Query: 556 AVAGTPGYLDPEYYVLN---WLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
A GT GY+ PE VL + +D +S G +L +++ G P D I +
Sbjct: 349 ASVGTHGYMAPE--VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406
Query: 613 NSMLAE 618
+M E
Sbjct: 407 LTMAVE 412
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGN--NMGLIYEYMASGTLDQY--LKGKKEHMLNWVERL 495
++ +L ++ H N+ L+ + N ++ +++E + G + + LK E + +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ- 144
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
D +G+EYLHY I+HRD+K SN+L+ E KIADFG+S F + SD + +
Sbjct: 145 ----DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--KGSDALLS 195
Query: 556 AVAGTPGYLDPEYYVLN---WLNEKSDVYSFGVVLLEIITGRRPVI 598
GTP ++ PE + + DV++ GV L + G+ P +
Sbjct: 196 NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 401 NFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQ-----LLQVKLLMRV-H 448
+F + LG G FG+V + D VAVKML S + ++K+L + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML----------------NWV 492
H N+ L+G C G +I EY G L +L+ K++ + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
+ L + A+G+ +L +HRD+ + NILL KI DFGL+R +S+
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
+ ++ PE +SDV+S+G+ L E+ +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 401 NFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQ-----LLQVKLLMRV-H 448
+F + LG G FG+V + D VAVKML S + ++K+L + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML----------------NWV 492
H N+ L+G C G +I EY G L +L+ K++ + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
+ L + A+G+ +L +HRD+ + NILL KI DFGL+R +S+
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
+ ++ PE +SDV+S+G+ L E+ +
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 32/225 (14%)
Query: 401 NFERVLGKGGFGEVYHGSL------DDNQQVAVKMLSSSCCFQ-----LLQVKLLMRV-H 448
+F + LG G FG+V + D VAVKML S + ++K+L + +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHML----------------NWV 492
H N+ L+G C G +I EY G L +L+ K++ + +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 493 ERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
+ L + A+G+ +L +HRD+ + NILL KI DFGL+R +S+
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRP 596
+ ++ PE +SDV+S+G+ L E+ + G P
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 404 RVLGKGGFGEVYHGSLD-----DNQQVAVKMLSSSCCFQL-----LQVKLLMRVHHRNLT 453
R LG+G FG+V D + VAVK L + Q ++ +L ++H ++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 454 ALIGYCIEGN--NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
G C + ++ L+ EY+ G+L YL H + + L A +G+ YLH
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYLH-- 151
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
+HRD+ + N+LL+ KI DFGL++ +P + +Y
Sbjct: 152 -AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF----WYAP 206
Query: 572 NWLNE-----KSDVYSFGVVLLEIIT 592
L E SDV+SFGV L E++T
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 404 RVLGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQL-------LQVKLLMRVHHRNLT 453
+ LG+G FG+V YH + Q+VA+K+++ + ++ L + H ++
Sbjct: 20 KTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 77
Query: 454 ALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L + + ++ EY + D Y+ + + R + SA +EY H +
Sbjct: 78 KLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISA--VEYCH---R 131
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN- 572
IVHRD+K N+LL+E L KIADFGLS I + + + T+ G+P Y PE V++
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTS-CGSPNYAAPE--VISG 186
Query: 573 --WLNEKSDVYSFGVVLLEIITGRRP 596
+ + DV+S GV+L ++ R P
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 39/246 (15%)
Query: 395 IQKITNNF--ERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKL----LMRV 447
I N+F R++G+GGFGEVY D + A+K C ++K+ + +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK------CLDKKRIKMKQGETLAL 237
Query: 448 HHRNLTALIG-------YCIE-----GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERL 495
+ R + +L+ C+ + + I + M G L +L + + + +
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMR 295
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A + GLE++H +V+RD+K +NILL+E +I+D GL+ FS +
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---- 348
Query: 556 AVAGTPGYLDPEYYVLN---WLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
A GT GY+ PE VL + +D +S G +L +++ G P D I +
Sbjct: 349 ASVGTHGYMAPE--VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406
Query: 613 NSMLAE 618
+M E
Sbjct: 407 LTMAVE 412
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 39/246 (15%)
Query: 395 IQKITNNF--ERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKL----LMRV 447
I N+F R++G+GGFGEVY D + A+K C ++K+ + +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMK------CLDKKRIKMKQGETLAL 237
Query: 448 HHRNLTALIG-------YCIE-----GNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERL 495
+ R + +L+ C+ + + I + M G L +L + + + +
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMR 295
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
A + GLE++H +V+RD+K +NILL+E +I+D GL+ FS +
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---- 348
Query: 556 AVAGTPGYLDPEYYVLN---WLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
A GT GY+ PE VL + +D +S G +L +++ G P D I +
Sbjct: 349 ASVGTHGYMAPE--VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406
Query: 613 NSMLAE 618
+M E
Sbjct: 407 LTMAVE 412
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 404 RVLGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQL-------LQVKLLMRVHHRNLT 453
+ LG+G FG+V YH + Q+VA+K+++ + ++ L + H ++
Sbjct: 19 KTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 76
Query: 454 ALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L + + ++ EY + D Y+ + + R + SA +EY H +
Sbjct: 77 KLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISA--VEYCH---R 130
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN- 572
IVHRD+K N+LL+E L KIADFGLS I + + + T+ G+P Y PE V++
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTS-CGSPNYAAPE--VISG 185
Query: 573 --WLNEKSDVYSFGVVLLEIITGRRP 596
+ + DV+S GV+L ++ R P
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 404 RVLGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQL-------LQVKLLMRVHHRNLT 453
+ LG+G FG+V YH + Q+VA+K+++ + ++ L + H ++
Sbjct: 10 KTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 67
Query: 454 ALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L + + ++ EY A L Y+ + + R + SA +EY H +
Sbjct: 68 KLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA--VEYCH---R 121
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN- 572
IVHRD+K N+LL+E L KIADFGLS I + + + T+ G+P Y PE V++
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTS-CGSPNYAAPE--VISG 176
Query: 573 --WLNEKSDVYSFGVVLLEIITGRRP 596
+ + DV+S GV+L ++ R P
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 26/206 (12%)
Query: 404 RVLGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQL-------LQVKLLMRVHHRNLT 453
+ LG+G FG+V YH + Q+VA+K+++ + ++ L + H ++
Sbjct: 14 KTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 71
Query: 454 ALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
L + + ++ EY + D Y+ + + R + SA +EY H +
Sbjct: 72 KLYDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQIISA--VEYCH---R 125
Query: 514 PPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN- 572
IVHRD+K N+LL+E L KIADFGLS I + + + T+ G+P Y PE V++
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTS-CGSPNYAAPE--VISG 180
Query: 573 --WLNEKSDVYSFGVVLLEIITGRRP 596
+ + DV+S GV+L ++ R P
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 38/209 (18%)
Query: 406 LGKGGFGEVYHGSLDDNQ--QVAVKMLSSSCCFQLL--------QVKLLMRVHHRNLTAL 455
+G G +G V + D +VAVK LS FQ + +++LL + H N+ L
Sbjct: 30 VGSGAYGSVC-AAFDTKTGLRVAVKKLSRP--FQSIIHAKRTYRELRLLKHMKHENVIGL 86
Query: 456 I-----GYCIEGNNMGLIYEYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEY 507
+ +E N + ++ L+ +K +K +H+ + ++ +GL+Y
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKY 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
+H I+HRD+K SN+ +NE + KI DFGL+R +D T T Y PE
Sbjct: 141 IHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 568 YYVLNWL--NEKSDVYSFGVVLLEIITGR 594
+LN + N+ D++S G ++ E++TGR
Sbjct: 193 -IMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGSLDD--NQQVAVKMLSSSCCFQLLQVKLLMRVHHRN 451
E++ + + + V G G +G V ++D +VA+K L ++ Q +L + +R
Sbjct: 22 EVRAVYRDLQPV-GSGAYGAVC-SAVDGRTGAKVAIKKL-----YRPFQSELFAKRAYRE 74
Query: 452 LTALIGYCIEGNNMGLIYEYMASGTLDQY-------------LKGKKEHMLNWVERLQIA 498
L L+ + N +GL+ + TLD + L +H +R+Q
Sbjct: 75 LR-LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL 133
Query: 499 V-DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
V +GL Y+H I+HRD+K N+ +NE + KI DFGL+R +D
Sbjct: 134 VYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGX 185
Query: 558 AGTPGYLDPEYYVLNWL--NEKSDVYSFGVVLLEIITGR 594
T Y PE +LNW+ + D++S G ++ E+ITG+
Sbjct: 186 VVTRWYRAPE-VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYL 508
H ++ LI + M L+++ M G L YL K L+ E I + + +L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFL 216
Query: 509 HYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
H IVHRD+K NILL++ +Q +++DFG S +E +++ + GTPGYL PE
Sbjct: 217 HANN---IVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPGEKLRE-LCGTPGYLAPEI 270
Query: 569 YVLNW------LNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ ++ D+++ GV+L ++ G P R +
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ 310
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 400 NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV 447
N FE ++LGKG FG+V Y+ ++V V L + ++L
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--KDEVAHTLTENRVLQNS 205
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
H LTAL + + + EY G L + +E + + + L+Y
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 263
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH + +V+RD+K N++L++ KI DFGL + I+ + T GTP YL PE
Sbjct: 264 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKT-FCGTPEYLAPE 319
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
N D + GVV+ E++ GR P
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 400 NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV 447
N FE ++LGKG FG+V Y+ ++V V L + ++L
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--KDEVAHTLTENRVLQNS 208
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
H LTAL + + + EY G L + +E + + + L+Y
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 266
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH + +V+RD+K N++L++ KI DFGL + I+ + T GTP YL PE
Sbjct: 267 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKT-FCGTPEYLAPE 322
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
N D + GVV+ E++ GR P
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 397 KIT-NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKL 443
K+T N+F+ ++LGKG FG+V Y+ ++V + + + ++
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRV 61
Query: 444 LMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQ 503
L H LTAL + + + EY G L + +E + +
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 119
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY 563
LEYLH +V+RD+K N++L++ KI DFGL + I + T GTP Y
Sbjct: 120 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKT-FCGTPEY 174
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
L PE N D + GVV+ E++ GR P
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 394 EIQKITNNFERVLGKGGFGEVY------HGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV 447
+I+KI F+ LG G F EV G L + + K L ++ +L ++
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
H N+ AL N++ L+ + ++ G L + K + + Q L+
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK-----GFYTEKDASTLIRQVLDA 132
Query: 508 LHYGCKPPIVHRDVKSSNILL---NEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYL 564
++Y + IVHRD+K N+L +E+ + I+DFGLS++ E + + GTPGY+
Sbjct: 133 VYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYV 189
Query: 565 DPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
PE ++ D +S GV+ ++ G P
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 397 KIT-NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKL 443
K+T N+F+ ++LGKG FG+V Y+ ++V + + + ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRV 58
Query: 444 LMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQ 503
L H LTAL + + + EY G L + +E + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY 563
LEYLH +V+RD+K N++L++ KI DFGL + I + T GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKT-FCGTPEY 171
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
L PE N D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 397 KIT-NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKL 443
K+T N+F+ ++LGKG FG+V Y+ ++V + + + ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRV 58
Query: 444 LMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQ 503
L H LTAL + + + EY G L + +E + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY 563
LEYLH +V+RD+K N++L++ KI DFGL + I + T GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKE-GISDGATMKT-FCGTPEY 171
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
L PE N D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 25/204 (12%)
Query: 406 LGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQLLQVKLLMR-------VHHRNLTALIG 457
LG G FG+V G +VAVK+L+ L V + R H ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 458 YCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
+ ++ EY++ G L Y+ G+ E M RL + SA ++Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--EARRLFQQILSA--VDYCH---RHM 131
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN--- 572
+VHRD+K N+LL+ + AKIADFGLS + S + G+P Y PE V++
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRTSCGSPNYAAPE--VISGRL 186
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ + D++S GV+L ++ G P
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 395 IQKITNNFERV--LGKGGFGEVY--HGSLDDNQQVAVKMLSSSCCFQ-------LLQVKL 443
Q +++ ++RV LG G +GEV L ++ A+K++ S L +V +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAER-AIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 444 LMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWVERLQIAVDSA 502
L ++ H N+ L + + N L+ E G L D+ + +K + V+ I
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVL 131
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQ---AKIADFGLSRIFSI--ESSDQISTAV 557
G YLH K IVHRD+K N+LL K + KI DFGLS F + + +++ TA
Sbjct: 132 SGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY 188
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
P L +Y +EK DV+S GV+L ++ G P
Sbjct: 189 YIAPEVLRKKY------DEKCDVWSCGVILYILLCGYPP 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 28/171 (16%)
Query: 440 QVKLLMRVHHRNLTALIG--YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
+++LL R+ H+N+ L+ Y E M ++ EY G + ML+ V +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM---------QEMLDSVPEKRF 106
Query: 498 AVDSAQG--------LEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIES 549
V A G LEYLH IVH+D+K N+LL KI+ G++ +
Sbjct: 107 PVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 550 SDQISTAVAGTPGYLDPEYYVLNWLNE----KSDVYSFGVVLLEIITGRRP 596
+D G+P + PE + N L+ K D++S GV L I TG P
Sbjct: 164 ADDTCRTSQGSPAFQPPE--IANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 397 KIT-NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKL 443
K+T N+F+ ++LGKG FG+V Y+ ++V + + + ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRV 58
Query: 444 LMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQ 503
L H LTAL + + + EY G L + +E + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY 563
LEYLH +V+RD+K N++L++ KI DFGL + S GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
L PE N D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 397 KIT-NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKL 443
K+T N+F+ ++LGKG FG+V Y+ ++V + + + ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRV 58
Query: 444 LMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQ 503
L H LTAL + + + EY G L + +E + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY 563
LEYLH +V+RD+K N++L++ KI DFGL + S GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
L PE N D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 397 KIT-NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKL 443
K+T N+F+ ++LGKG FG+V Y+ ++V + + + ++
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRV 63
Query: 444 LMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQ 503
L H LTAL + + + EY G L + +E + +
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 121
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY 563
LEYLH +V+RD+K N++L++ KI DFGL + S GTP Y
Sbjct: 122 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 176
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
L PE N D + GVV+ E++ GR P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 397 KIT-NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKL 443
K+T N+F+ ++LGKG FG+V Y+ ++V + + + ++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KDEVAHTVTESRV 58
Query: 444 LMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQ 503
L H LTAL + + + EY G L + +E + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY 563
LEYLH +V+RD+K N++L++ KI DFGL + S GTP Y
Sbjct: 117 ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEY 171
Query: 564 LDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
L PE N D + GVV+ E++ GR P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ-----LLQVKLLMRVHHRNLTALIGYC 459
LG GGFG V D +QVA+K + L+++++ +++H N+ +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 460 -----IEGNNMGLI-YEYMASGTLDQYLK------GKKEHMLNWVERLQIAVDSAQGLEY 507
+ N++ L+ EY G L +YL G KE + + D + L Y
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRY 136
Query: 508 LHYGCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYL 564
LH I+HRD+K NI+L ++L KI D G ++ ++ T GT YL
Sbjct: 137 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD---QGELCTEFVGTLQYL 190
Query: 565 DPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVI 598
PE D +SFG + E ITG RP +
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ-----LLQVKLLMRVHHRNLTALIGYC 459
LG GGFG V D +QVA+K + L+++++ +++H N+ +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 460 -----IEGNNMGLI-YEYMASGTLDQYLK------GKKEHMLNWVERLQIAVDSAQGLEY 507
+ N++ L+ EY G L +YL G KE + + D + L Y
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRY 137
Query: 508 LHYGCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYL 564
LH I+HRD+K NI+L ++L KI D G ++ ++ T GT YL
Sbjct: 138 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD---QGELCTEFVGTLQYL 191
Query: 565 DPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVI 598
PE D +SFG + E ITG RP +
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 25/204 (12%)
Query: 406 LGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQLLQVKLLMR-------VHHRNLTALIG 457
LG G FG+V G +VAVK+L+ L V + R H ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 458 YCIEGNNMGLIYEYMASGTLDQYL--KGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPP 515
+ ++ EY++ G L Y+ G+ E M RL + SA ++Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEM--EARRLFQQILSA--VDYCH---RHM 131
Query: 516 IVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN--- 572
+VHRD+K N+LL+ + AKIADFGLS + S + G+P Y PE V++
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRDSCGSPNYAAPE--VISGRL 186
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ + D++S GV+L ++ G P
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ +G G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EYM G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ K+ADFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ +G G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EYM G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ K+ADFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 19/224 (8%)
Query: 389 QFAYSEIQKITNN-FE--RVLGKGGFGEVYHGSLDDNQQV--------AVKMLSSSCCFQ 437
Q+ + E Q +T N F RVLGKGGFGEV + ++
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNN-MGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ 496
L + ++L +V+ R + +L Y E + + L+ M G L ++ + +
Sbjct: 232 LNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
A + GLE LH + IV+RD+K NILL++ +I+D GL+ + I
Sbjct: 291 YAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR 345
Query: 557 VAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISR 600
V GT GY+ PE D ++ G +L E+I G+ P R
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 422 NQQVAVKM--LSSSCCFQLL--QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTL 477
+QVAVK L +LL +V ++ HH N+ + + G+ + ++ E++ G L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 478 DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIA 537
+ + +N + + + + L YLH ++HRD+KS +ILL + K++
Sbjct: 130 TDIVTHTR---MNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLS 183
Query: 538 DFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
DFG S E + + GTP ++ PE + D++S G++++E+I G P
Sbjct: 184 DFGFCAQVSKEVPKR--KXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 402 FERVLGKGGFGEVY-----HGSLD--------DNQQVAVKMLSSSCCFQLLQVKLLMRVH 448
F+R LG G FG+V+ L+ D QV ++ + + ++++L +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA-------EIEVLKSLD 78
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYL 508
H N+ + + +NM ++ E G L + + + E +A Q + L
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGY-VAELMKQMMNAL 137
Query: 509 HYGCKPPIVHRDVKSSNILLNE---KLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
Y +VH+D+K NIL + KI DFGL+ +F SD+ ST AGT Y+
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK---SDEHSTNAAGTALYMA 194
Query: 566 PEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
PE + + + K D++S GVV+ ++TG P
Sbjct: 195 PEVFKRD-VTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 26/279 (9%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL------QVKLLMRVHHRNLTALIG 457
++G+G +G V + D + VA+K S +++ ++KLL ++ H NL L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
C + L++E++ LD V++ + + G + H I+
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH-----NII 146
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRD+K NIL+++ K+ DFG +R ++ + ++ T Y PE V + K
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPELLVGDVKYGK 204
Query: 578 S-DVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNN 636
+ DV++ G ++ E+ G P+ D I Q + M+ G N++ P Q F+ N
Sbjct: 205 AVDVWAIGCLVTEMFMG-EPLFPGDSD----IDQLYHIMMCLG---NLI-PRHQELFNKN 255
Query: 637 SAWKAVELALACASHTSSER-PTMTDVLMEL-KECLSLE 673
+ V L R P +++V+++L K+CL ++
Sbjct: 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID 294
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 99/224 (44%), Gaps = 19/224 (8%)
Query: 389 QFAYSEIQKITNN-FE--RVLGKGGFGEVYHGSLDDNQQV--------AVKMLSSSCCFQ 437
Q+ + E Q +T N F RVLGKGGFGEV + ++
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNN-MGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ 496
L + ++L +V+ R + +L Y E + + L+ M G L ++ + +
Sbjct: 232 LNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
A + GLE LH + IV+RD+K NILL++ +I+D GL+ + I
Sbjct: 291 YAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGR 345
Query: 557 VAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISR 600
V GT GY+ PE D ++ G +L E+I G+ P R
Sbjct: 346 V-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 400 NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV 447
N FE ++LGKG FG+V Y+ ++V V L + ++L
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--KDEVAHTLTENRVLQNS 67
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
H LTAL + + + EY G L + +E + + + L+Y
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH + +V+RD+K N++L++ KI DFGL + I+ + GTP YL PE
Sbjct: 126 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMK-XFCGTPEYLAPE 181
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
N D + GVV+ E++ GR P
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 400 NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV 447
N FE ++LGKG FG+V Y+ ++V V L + ++L
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--KDEVAHTLTENRVLQNS 66
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
H LTAL + + + EY G L + +E + + + L+Y
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH + +V+RD+K N++L++ KI DFGL + I+ + GTP YL PE
Sbjct: 125 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMKX-FCGTPEYLAPE 180
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
N D + GVV+ E++ GR P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 400 NNFE--RVLGKGGFGEV----------YHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV 447
N FE ++LGKG FG+V Y+ ++V V L + ++L
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--KDEVAHTLTENRVLQNS 65
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
H LTAL + + + EY G L + +E + + + L+Y
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH + +V+RD+K N++L++ KI DFGL + I+ + GTP YL PE
Sbjct: 124 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE-GIKDGATMK-XFCGTPEYLAPE 179
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
N D + GVV+ E++ GR P
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 12/182 (6%)
Query: 422 NQQVAVKM--LSSSCCFQLL--QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTL 477
+QVAVKM L +LL +V ++ H N+ + + G + ++ E++ G L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 478 DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIA 537
+ + LN + + Q L YLH ++HRD+KS +ILL + K++
Sbjct: 130 TDIVSQVR---LNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLS 183
Query: 538 DFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPV 597
DFG S + + + GTP ++ PE + + D++S G++++E++ G P
Sbjct: 184 DFGFCAQISKDVPKR--KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
Query: 598 IS 599
S
Sbjct: 242 FS 243
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ +G G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ K+ADFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 398 ITNNFERV--LGKGGFGEVY--HGSLDDNQQVAVKMLSSSCCFQ-------LLQVKLLMR 446
+++ ++RV LG G +GEV L ++ A+K++ S L +V +L +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAER-AIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 447 VHHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
+ H N+ L + + N L+ E G L D+ + +K + V+ I G
Sbjct: 61 LDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK---FSEVDAAVIMKQVLSGT 117
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQ---AKIADFGLSRIFSI--ESSDQISTAVAGT 560
YLH K IVHRD+K N+LL K + KI DFGLS F + + +++ TA
Sbjct: 118 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 174
Query: 561 PGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
P L +Y +EK DV+S GV+L ++ G P
Sbjct: 175 PEVLRKKY------DEKCDVWSCGVILYILLCGYPP 204
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 40/250 (16%)
Query: 363 RRNKRVGQKVEMEFEN-RNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDD 421
RR + VG V E E + F R Y+++Q I G+G +G V S D
Sbjct: 18 RRTEGVGPGVPGEVEMVKGQPFDVGPR---YTQLQYI--------GEGAYGMV--SSAYD 64
Query: 422 N---QQVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTA----LIGYCIEGNNMGLIY 469
+ +VA+K +S + C L ++++L+R H N+ L +E I
Sbjct: 65 HVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIV 124
Query: 470 EYMASGTLDQYLKGKK---EHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
+ + L + LK ++ +H+ ++ ++ +GL+Y+H ++HRD+K SN+
Sbjct: 125 QDLMETDLYKLLKSQQLSNDHICYFLYQI------LRGLKYIHSAN---VLHRDLKPSNL 175
Query: 527 LLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNEKS-DVYSFG 584
L+N KI DFGL+RI E T T Y PE + + KS D++S G
Sbjct: 176 LINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 585 VVLLEIITGR 594
+L E+++ R
Sbjct: 236 CILAEMLSNR 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 146
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 148
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 146
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 146
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
LT L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ K+ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
LT L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ K+ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
LT L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ K+ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 393 SEIQKITNNFERVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCFQ-----LLQVKLLMR 446
+EI + N E +G G G+V+ V AVK + S + L+ + ++++
Sbjct: 22 AEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLK 79
Query: 447 VHH-RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERL--QIAVDSAQ 503
H + G I ++ + E M GT + LK + + + ER+ ++ V +
Sbjct: 80 SHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIP--ERILGKMTVAIVK 135
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLS-RIFSIESSDQISTAVA-GTP 561
L YL K ++HRDVK SNILL+E+ Q K+ DFG+S R+ ++ D+ + A P
Sbjct: 136 ALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAP 193
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
+DP + ++DV+S G+ L+E+ TG+ P
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 146
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 151
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 211
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 212 KSIDIWSVGCILAEMLSNR 230
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 395 IQKITNNFERVLGKGGFGEVYHG-SLDDNQQVAVKMLS----SSCCFQLLQ--VKLLMRV 447
Q + FE LGKG F V + Q+ A K+++ S+ Q L+ ++ +
Sbjct: 20 FQSMYQLFEE-LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLL 78
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTL-------DQYLKGKKEHMLNWVERLQIAVD 500
H N+ L E + LI++ + G L + Y + H +
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---------- 128
Query: 501 SAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQA---KIADFGLSRIFSIESSDQISTAV 557
Q LE + + + +VHRD+K N+LL KL+ K+ADFGL+ +E Q
Sbjct: 129 --QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGF 184
Query: 558 AGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
AGTPGYL PE + + D+++ GV+L ++ G P
Sbjct: 185 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 152
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 212
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 213 KSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 143
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 203
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 204 KSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 150
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 394 EIQKITNNFERV--LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ---------LLQV 441
+++ +E++ LG+G F VY + NQ VA+K + + L ++
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 442 KLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASG----TLDQYLKGKKEHMLNWVERLQI 497
KLL + H N+ L+ +N+ L++++M + D L H+ ++
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYM----- 118
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ + QGLEYLH I+HRD+K +N+LL+E K+ADFGL++ F S ++
Sbjct: 119 -LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG--SPNRAYXHQ 172
Query: 558 AGTPGYLDPE-YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAED 603
T Y PE + D+++ G +L E++ R P + D
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSD 218
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 144
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 205 KSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 144
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 205 KSIDIWSVGCILAEMLSNR 223
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 400 NNFERVLGKGGFGEVYHGSLDDNQQ-VAVKM--LSSSCCFQLL--QVKLLMRVHHRNLTA 454
+NF ++ G+G G V ++ + + VAVK L +LL +V ++ H N+
Sbjct: 154 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ + G+ + ++ E++ G L + + +N + + + Q L LH
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-- 267
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
++HRD+KS +ILL + K++DFG S E + + GTP ++ PE
Sbjct: 268 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY 324
Query: 575 NEKSDVYSFGVVLLEIITGRRP 596
+ D++S G++++E++ G P
Sbjct: 325 GPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 150
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 166
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 154
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 215 KSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 146
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 166
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 167 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + +AGTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN-DHICYFLYQILRGLKYIHSA---NVL 150
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 400 NNFERVLGKGGFGEVYHGSLDDNQQ-VAVKM--LSSSCCFQLL--QVKLLMRVHHRNLTA 454
+NF ++ G+G G V ++ + + VAVK L +LL +V ++ H N+
Sbjct: 32 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ + G+ + ++ E++ G L + + +N + + + Q L LH
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-- 145
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
++HRD+KS +ILL + K++DFG S E + + GTP ++ PE
Sbjct: 146 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY 202
Query: 575 NEKSDVYSFGVVLLEIITGRRP 596
+ D++S G++++E++ G P
Sbjct: 203 GPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 32/226 (14%)
Query: 403 ERVLGKGGFGEVYHG-SLDDNQQVAVKMLSS------SCCFQLLQVKLLMRVH-HRNLTA 454
E VLG+G V +L +Q+ AVK++ S F+ +V++L + HRN+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR--EVEMLYQCQGHRNVLE 75
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
LI + E + L++E M G++ ++ K+ H N +E + D A L++LH
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIH-KRRH-FNELEASVVVQDVASALDFLH---NK 130
Query: 515 PIVHRDVKSSNILL---NEKLQAKIADFGLSRIFSIES-SDQIST----AVAGTPGYLDP 566
I HRD+K NIL N+ KI DFGL + IST G+ Y+ P
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 567 EYYVLNWLNEKSDVY-------SFGVVLLEIITGRRPVISRAEDDT 605
E V+ +E++ +Y S GV+L +++G P + R D
Sbjct: 191 E--VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 405 VLGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQVK----LLMRVHHRNLTALIGYC 459
+LG G FG+V+ ++A K++ + +VK ++ ++ H NL L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 460 IEGNNMGLIYEYMASGTL-DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVH 518
N++ L+ EY+ G L D+ + + + L ++ + +G+ ++H + I+H
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIID--ESYNLTELDTILFMKQICEGIRHMH---QMYILH 210
Query: 519 RDVKSSNILL--NEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE 576
D+K NIL + Q KI DFGL+R + +++ GTP +L PE ++++
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNYDFVSF 267
Query: 577 KSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+D++S GV+ +++G P + + +T
Sbjct: 268 PTDMWSVGVIAYMLLSGLSPFLGDNDAET 296
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 400 NNFERVLGKGGFGEVYHGSLDDNQQ-VAVKM--LSSSCCFQLL--QVKLLMRVHHRNLTA 454
+NF ++ G+G G V ++ + + VAVK L +LL +V ++ H N+
Sbjct: 34 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ + G+ + ++ E++ G L + + +N + + + Q L LH
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-- 147
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
++HRD+KS +ILL + K++DFG S E + + GTP ++ PE
Sbjct: 148 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY 204
Query: 575 NEKSDVYSFGVVLLEIITGRRP 596
+ D++S G++++E++ G P
Sbjct: 205 GPEVDIWSLGIMVIEMVDGEPP 226
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA++ +S + C L ++K+L+R H N+ + I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 150
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 143
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++E+ ++ DFG ++ + + GTP YL PE
Sbjct: 144 LH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 195
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 227
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 406 LGKGGFGEVYHGSLD--DNQQVAVKML------SSSCCFQLLQVKLLMRVH-HRNLTALI 456
LGKG +G V+ S+D + VAVK + S+ ++ +L + H N+ L+
Sbjct: 17 LGKGAYGIVW-KSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 457 GYCIEGNN--MGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
N+ + L+++YM + L ++ ++L V + + + ++YLH G
Sbjct: 76 NVLRADNDRDVYLVFDYMETD-LHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-- 129
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIF-------------------SIESSDQIST 555
++HRD+K SNILLN + K+ADFGLSR F + + I T
Sbjct: 130 -LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 556 AVAGTPGYLDPEYYVLNWLNEKS-DVYSFGVVLLEIITGR 594
T Y PE + + K D++S G +L EI+ G+
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 400 NNFERVLGKGGFGEVYHGSL-DDNQQVAVKM--LSSSCCFQLL--QVKLLMRVHHRNLTA 454
+NF ++ G+G G V ++ + VAVK L +LL +V ++ H N+
Sbjct: 23 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ + G+ + ++ E++ G L + + +N + + + Q L LH
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-- 136
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
++HRD+KS +ILL + K++DFG S E + + GTP ++ PE
Sbjct: 137 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY 193
Query: 575 NEKSDVYSFGVVLLEIITGRRP 596
+ D++S G++++E++ G P
Sbjct: 194 GPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 142
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 143 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPE 194
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 226
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 400 NNFERVLGKGGFGEVYHGSLDDNQQ-VAVKM--LSSSCCFQLL--QVKLLMRVHHRNLTA 454
+NF ++ G+G G V ++ + + VAVK L +LL +V ++ H N+
Sbjct: 77 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ + G+ + ++ E++ G L + + +N + + + Q L LH
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-- 190
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
++HRD+KS +ILL + K++DFG S E + + GTP ++ PE
Sbjct: 191 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY 247
Query: 575 NEKSDVYSFGVVLLEIITGRRP 596
+ D++S G++++E++ G P
Sbjct: 248 GPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 28/220 (12%)
Query: 399 TNNFERV--LGKGGFGEVYHG-SLDDNQQVAVK------------MLSSSCCFQLLQVKL 443
T+ +E V +G G +G VY VA+K L S ++ ++
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 444 LMRVHHRNLTALIGYCIEGN-----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIA 498
L H N+ L+ C + L++E++ L YL L +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 126
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
+GL++LH C IVHRD+K NIL+ K+ADFGL+RI+S + + T V
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LTPVV 180
Query: 559 GTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVI 598
T Y PE + + D++S G + E+ R+P+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF 219
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
Query: 489 LNWVERLQIAVD-SAQGLEYLHYGCKPPIVHRDVKSSNILL--NEKLQAKIADFGLSRIF 545
L++V+R ++ + Q LHY I HRD+K N L N+ + K+ DFGLS+ F
Sbjct: 161 LDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220
Query: 546 SIESSDQI--STAVAGTPGYLDPEYYVLNWLNE----KSDVYSFGVVLLEIITGRRPVIS 599
++ + T AGTP ++ PE VLN NE K D +S GV+L ++ G P
Sbjct: 221 YKLNNGEYYGMTTKAGTPYFVAPE--VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPG 278
Query: 600 RAEDDTTHISQWVNSMLA-EGDIRNIVDP 627
+ DT ISQ +N L E N++ P
Sbjct: 279 VNDADT--ISQVLNKKLCFENPNYNVLSP 305
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ K+ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 400 NNFERVLGKGGFGEVYHGSL-DDNQQVAVKM--LSSSCCFQLL--QVKLLMRVHHRNLTA 454
+NF ++ G+G G V ++ + VAVK L +LL +V ++ H N+
Sbjct: 27 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ + G+ + ++ E++ G L + + +N + + + Q L LH
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQG-- 140
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
++HRD+KS +ILL + K++DFG S E + + GTP ++ PE
Sbjct: 141 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY 197
Query: 575 NEKSDVYSFGVVLLEIITGRRP 596
+ D++S G++++E++ G P
Sbjct: 198 GPEVDIWSLGIMVIEMVDGEPP 219
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 54/228 (23%)
Query: 404 RVLGKGGFGEVYHGS--LDD-----------NQQVAVKMLSSSCCFQLLQVKLLMRVHHR 450
+ LG+GGFG V+ +DD N+++A + + + +VK L ++ H
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKV-------MREVKALAKLEHP 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLK-----GKKEHMLNWV---------ER-- 494
+ +E N E + + YL +KE++ +W+ ER
Sbjct: 64 GIVRYFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 495 -LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
L I + A+ +E+LH ++HRD+K SNI K+ DFGL + +Q
Sbjct: 120 CLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 554 ----------STAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEII 591
T GT Y+ PE N + K D++S G++L E++
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQA---KIADFGLSRIFSIESSDQISTAVAG 559
Q LE +++ + IVHRD+K N+LL K + K+ADFGL+ ++ Q AG
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAG 195
Query: 560 TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
TPGYL PE + + D+++ GV+L ++ G P
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ K+ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 177
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPE 229
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 40/233 (17%)
Query: 386 KSRQFAYSEIQKITNNFE--RVLGKGGFGEV---YHGSLDDNQQVAVKMLS----SSCCF 436
+ +F + K ++N++ LGKG F V H + + A K+++ S+ F
Sbjct: 15 RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTT--GLEFAAKIINTKKLSARDF 72
Query: 437 QLLQ--VKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQ-------YLKGKKEH 487
Q L+ ++ ++ H N+ L E + L+++ + G L + Y + H
Sbjct: 73 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132
Query: 488 MLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQA---KIADFGLSRI 544
+ Q LE + Y IVHR++K N+LL K + K+ADFGL+
Sbjct: 133 CIQ------------QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-- 178
Query: 545 FSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
IE +D + AGTPGYL PE + ++ D+++ GV+L ++ G P
Sbjct: 179 --IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L ++ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ K+ DFGL++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIST 555
+IAV + LE+LH K ++HRDVK SN+L+N Q K DFG+S + + I
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID- 196
Query: 556 AVAGTPGYLDPEYYVLNWLNE-----KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQ 610
AG Y PE + LN+ KSD++S G+ +E+ R P S
Sbjct: 197 --AGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS----------- 242
Query: 611 WVNSMLAEGDIRNIV-DPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDV 662
W ++ +V +PS Q D SA + V+ C S ERPT ++
Sbjct: 243 WGTPF---QQLKQVVEEPSPQLPADKFSA-EFVDFTSQCLKKNSKERPTYPEL 291
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 115/235 (48%), Gaps = 31/235 (13%)
Query: 392 YSEIQKITNNFERVLGKGGFGEVYHG-SLDDNQQVAVKML------SSSCCFQLLQVKLL 444
+ ++ K+T+ +LG+G + +V SL + ++ AVK++ S S F+ +V+ L
Sbjct: 10 FEDMYKLTSE---LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFR--EVETL 64
Query: 445 MRVH-HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQ 503
+ ++N+ LI + + L++E + G++ +++ K+ N E ++ D A
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQ--KQKHFNEREASRVVRDVAA 122
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLN--EKLQ-AKIADFGLSRIFSIESS-DQISTAVAG 559
L++LH I HRD+K NIL EK+ KI DF L + +S I+T
Sbjct: 123 ALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 560 TPG----YLDPEYYVL-----NWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
TP Y+ PE + + +++ D++S GVVL +++G P + D
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADC 234
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 42/230 (18%)
Query: 397 KITNNFER--VLGKGGFGEVYHG-SLDDNQQVAVKMLSSS---CCFQLLQVKLLMRVHH- 449
+ ++FE VLG+G FG+V + D++ A+K + + L +V LL ++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 450 ------------RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
RN + + + + + EY +GTL + + LN +R +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQ-QRDEY 118
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-------IFSIE-- 548
Q LE L Y I+HRD+K NI ++E KI DFGL++ I ++
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 549 ----SSDQISTAVAGTPGYLDPEYYVLN---WLNEKSDVYSFGVVLLEII 591
SSD +++A+ GT Y+ E VL+ NEK D+YS G++ E+I
Sbjct: 179 NLPGSSDNLTSAI-GTAMYVATE--VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 150
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+R H N+ + I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 151
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T Y PE + +
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 212 KSIDIWSVGCILAEMLSNR 230
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 403 ERVLGKGGFGEVYHGSLDDNQQ-VAVKMLSSSCCFQLL--QVKLLMRVHHRNLTALIGYC 459
E LG+G VY Q+ A+K+L + +++ ++ +L+R+ H N+ L
Sbjct: 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ L+ E + G L + K + A Q LE + Y + IVHR
Sbjct: 118 ETPTEISLVLELVTGGELFDRIVEK-----GYYSERDAADAVKQILEAVAYLHENGIVHR 172
Query: 520 DVKSSNILLNE---KLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNE 576
D+K N+L KIADFGLS+I +E + T V GTPGY PE
Sbjct: 173 DLKPENLLYATPAPDAPLKIADFGLSKI--VEHQVLMKT-VCGTPGYCAPEILRGCAYGP 229
Query: 577 KSDVYSFGVVLLEIITGRRP 596
+ D++S G++ ++ G P
Sbjct: 230 EVDMWSVGIITYILLCGFEP 249
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLS-------SSCCFQLLQVKLLMRVHHRNLTAL 455
+V+G+G FGEV ++V A+K+LS S F + + +M +
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF-FWEERDIMAFANSPWVVQ 133
Query: 456 IGYCIEGNN-MGLIYEYMASGTLDQYLKG---KKEHMLNWVERLQIAVDSAQGLEYLHYG 511
+ Y + + + ++ EYM G L + ++ + + +A+D+ + +
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---- 189
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
+HRDVK N+LL++ K+ADFG + E + TAV GTP Y+ PE VL
Sbjct: 190 -----IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPE--VL 241
Query: 572 N------WLNEKSDVYSFGVVLLEIITGRRP 596
+ + D +S GV L E++ G P
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 402 FERVLGKGGFGEVYHGSLD-DNQQVAVKMLSSSCCFQLL----QVKLLMRVHHRNLTALI 456
F VLG G F EV+ + A+K + S F+ ++ +L ++ H N+ L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 457 GYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPI 516
+ L+ + ++ G L + + + + V SA ++YLH + I
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA--VKYLH---ENGI 127
Query: 517 VHRDVKSSNILL---NEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNW 573
VHRD+K N+L E + I DFGLS++ E + +STA GTPGY+ PE
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTA-CGTPGYVAPEVLAQKP 183
Query: 574 LNEKSDVYSFGVVLLEIITGRRPVISRAE 602
++ D +S GV+ ++ G P E
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETE 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ---QVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
LG+G FGEV+ ++D Q Q AVK + F+ ++ + + L G EG
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEV-FRAEELMACAGLTSPRIVPLYGAVREG 157
Query: 463 NNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVK 522
+ + E + G+L Q +K ++ L L + +GLEYLH I+H DVK
Sbjct: 158 PWVNIFMELLEGGSLGQLVK--EQGCLPEDRALYYLGQALEGLEYLH---SRRILHGDVK 212
Query: 523 SSNILL-NEKLQAKIADFGLSRIF---SIESSDQISTAVAGTPGYLDPEYYVLNWLNEKS 578
+ N+LL ++ A + DFG + + S + GT ++ PE + + K
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKV 272
Query: 579 DVYSFGVVLLEIITGRRP 596
DV+S ++L ++ G P
Sbjct: 273 DVWSSCCMMLHMLNGCHP 290
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ S L +++ + QGL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 125 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLS-------SSCCFQLLQVKLLMRVHHRNLTAL 455
+V+G+G FGEV ++V A+K+LS S F + + +M +
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF-FWEERDIMAFANSPWVVQ 138
Query: 456 IGYCIEGNN-MGLIYEYMASGTLDQYLKG---KKEHMLNWVERLQIAVDSAQGLEYLHYG 511
+ Y + + + ++ EYM G L + ++ + + +A+D+ + +
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---- 194
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
+HRDVK N+LL++ K+ADFG + E + TAV GTP Y+ PE VL
Sbjct: 195 -----IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPE--VL 246
Query: 572 N------WLNEKSDVYSFGVVLLEIITGRRP 596
+ + D +S GV L E++ G P
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ S L +++ + QGL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ---QVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
LG+G FGEV+ ++D Q Q AVK + F+ ++ + + L G EG
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEV-FRAEELMACAGLTSPRIVPLYGAVREG 138
Query: 463 NNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVK 522
+ + E + G+L Q +K ++ L L + +GLEYLH I+H DVK
Sbjct: 139 PWVNIFMELLEGGSLGQLVK--EQGCLPEDRALYYLGQALEGLEYLH---SRRILHGDVK 193
Query: 523 SSNILL-NEKLQAKIADFGLSRIFSIESSDQ---ISTAVAGTPGYLDPEYYVLNWLNEKS 578
+ N+LL ++ A + DFG + + + + GT ++ PE + + K
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKV 253
Query: 579 DVYSFGVVLLEIITGRRP 596
DV+S ++L ++ G P
Sbjct: 254 DVWSSCCMMLHMLNGCHP 271
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 25/231 (10%)
Query: 406 LGKGGFGEVYH-------GSLDDNQQVAVKM----LSSSCCFQLLQVKLLMRVHHRNLTA 454
+G+G +G+V+ G ++V V+ + S ++ ++ L H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 455 LIGYCI-----EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L C + L++E++ L YL E + + +GL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
+VHRD+K NIL+ Q K+ADFGL+RI+S + + T+V T Y PE
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVL 191
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGD 620
+ + D++S G + E+ RR + R D + + ++ + G+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGE 240
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLS-------SSCCFQLLQVKLLMRVHHRNLTAL 455
+V+G+G FGEV ++V A+K+LS S F + + +M +
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF-FWEERDIMAFANSPWVVQ 138
Query: 456 IGYCIEGNN-MGLIYEYMASGTLDQYLKG---KKEHMLNWVERLQIAVDSAQGLEYLHYG 511
+ Y + + + ++ EYM G L + ++ + + +A+D+ + +
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---- 194
Query: 512 CKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
+HRDVK N+LL++ K+ADFG + E + TAV GTP Y+ PE VL
Sbjct: 195 -----IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPE--VL 246
Query: 572 N------WLNEKSDVYSFGVVLLEIITGRRP 596
+ + D +S GV L E++ G P
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+ H N+ + I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 148
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQA---KIADFGLSRIFSIESSDQISTAVAG 559
Q LE + + + +VHR++K N+LL KL+ K+ADFGL+ +E Q AG
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAG 175
Query: 560 TPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
TPGYL PE + + D+++ GV+L ++ G P
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 40/222 (18%)
Query: 397 KITNNFE--RVLGKGGFGEV---YHGSLDDNQQVAVKMLS----SSCCFQLLQ--VKLLM 445
K ++N++ LGKG F V H + + A K+++ S+ FQ L+ ++
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTT--GLEFAAKIINTKKLSARDFQKLEREARICR 59
Query: 446 RVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQ-------YLKGKKEHMLNWVERLQIA 498
++ H N+ L E + L+++ + G L + Y + H +
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-------- 111
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQA---KIADFGLSRIFSIESSD-QIS 554
Q LE + Y IVHR++K N+LL K + K+ADFGL+ IE +D +
Sbjct: 112 ----QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA----IEVNDSEAW 163
Query: 555 TAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
AGTPGYL PE + ++ D+++ GV+L ++ G P
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 40/222 (18%)
Query: 397 KITNNFE--RVLGKGGFGEV---YHGSLDDNQQVAVKMLS----SSCCFQLLQ--VKLLM 445
K ++N++ LGKG F V H + + A K+++ S+ FQ L+ ++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTT--GLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 446 RVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQ-------YLKGKKEHMLNWVERLQIA 498
++ H N+ L E + L+++ + G L + Y + H +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-------- 112
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQA---KIADFGLSRIFSIESSD-QIS 554
Q LE + Y IVHR++K N+LL K + K+ADFGL+ IE +D +
Sbjct: 113 ----QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA----IEVNDSEAW 164
Query: 555 TAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
AGTPGYL PE + ++ D+++ GV+L ++ G P
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 40/222 (18%)
Query: 397 KITNNFE--RVLGKGGFGEV---YHGSLDDNQQVAVKMLS----SSCCFQLLQ--VKLLM 445
K ++N++ LGKG F V H + + A K+++ S+ FQ L+ ++
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTT--GLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 446 RVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQ-------YLKGKKEHMLNWVERLQIA 498
++ H N+ L E + L+++ + G L + Y + H +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-------- 112
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQA---KIADFGLSRIFSIESSD-QIS 554
Q LE + Y IVHR++K N+LL K + K+ADFGL+ IE +D +
Sbjct: 113 ----QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA----IEVNDSEAW 164
Query: 555 TAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
AGTPGYL PE + ++ D+++ GV+L ++ G P
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 399 TNNFERV--LGKGGFGEVYHG-SLDDNQQVAVKM---------LSSSCCFQLLQVKLLMR 446
T+ +E V +G G +G VY VA+K L S ++ ++ L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 447 VHHRNLTALIGYCIEGN-----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDS 501
H N+ L+ C + L++E++ L YL L +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP 561
+GL++LH C IVHRD+K NIL+ K+ADFGL+RI+S + + V T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LAPVVVTL 175
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVI 598
Y PE + + D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF 211
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 151
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 152 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 203
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 177
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 229
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 37/251 (14%)
Query: 363 RRNKRVGQKVEMEFENRNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGSLDDN 422
R+NK + F NR + K R +++ + +V+G+G FGEV +
Sbjct: 48 RKNKNIDN-----FLNRYEKIVKKIRGL---QMKAEDYDVVKVIGRGAFGEVQLVRHKAS 99
Query: 423 QQV-AVKMLS-------SSCCFQLLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMAS 474
Q+V A+K+LS S F + ++ + + L + + ++ EYM
Sbjct: 100 QKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPG 159
Query: 475 GTLDQYLKG---KKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK 531
G L + ++ + + +A+D+ + ++HRDVK N+LL++
Sbjct: 160 GDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---------GLIHRDVKPDNMLLDKH 210
Query: 532 LQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL------NWLNEKSDVYSFGV 585
K+ADFG TAV GTP Y+ PE VL + + D +S GV
Sbjct: 211 GHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPE--VLKSQGGDGYYGRECDWWSVGV 267
Query: 586 VLLEIITGRRP 596
L E++ G P
Sbjct: 268 FLFEMLVGDTP 278
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 516 IVHRDVKSSNILLNEKLQA---KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
+VHRD+K N+LL K + K+ADFGL+ ++ Q AGTPGYL PE
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKE 181
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ D+++ GV+L ++ G P
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPP 205
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 25/231 (10%)
Query: 406 LGKGGFGEVYH-------GSLDDNQQVAVKM----LSSSCCFQLLQVKLLMRVHHRNLTA 454
+G+G +G+V+ G ++V V+ + S ++ ++ L H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 455 LIGYCI-----EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L C + L++E++ L YL E + + +GL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
+VHRD+K NIL+ Q K+ADFGL+RI+S + + T+V T Y PE
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVL 191
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGD 620
+ + D++S G + E+ RR + R D + + ++ + G+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGE 240
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 149
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 201
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ S L ++ + QGL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 178
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V ++ A+K+L +L ++ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ ++ DFGL++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEY 149
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 201
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ S L ++ + QGL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 25/231 (10%)
Query: 406 LGKGGFGEVYH-------GSLDDNQQVAVKM----LSSSCCFQLLQVKLLMRVHHRNLTA 454
+G+G +G+V+ G ++V V+ + S ++ ++ L H N+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 455 LIGYCI-----EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
L C + L++E++ L YL E + + +GL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
+VHRD+K NIL+ Q K+ADFGL+RI+S + + T+V T Y PE
Sbjct: 138 ---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVL 191
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGD 620
+ + D++S G + E+ RR + R D + + ++ + G+
Sbjct: 192 LQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDVIGLPGE 240
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 399 TNNFERV--LGKGGFGEVYHG-SLDDNQQVAVKM---------LSSSCCFQLLQVKLLMR 446
T+ +E V +G G +G VY VA+K L S ++ ++ L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 447 VHHRNLTALIGYCIEGN-----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDS 501
H N+ L+ C + L++E++ L YL L +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP 561
+GL++LH C IVHRD+K NIL+ K+ADFGL+RI+S + + V T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LDPVVVTL 175
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVI 598
Y PE + + D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF 211
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 180
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 397 KITNNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRV 447
+ NF++V +G+G +G VY + VA+K + + ++ LL +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
+H N+ L+ N + L++E++ L +++ + QGL +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
H ++HRD+K N+L+N + K+ADFGL+R F + V T Y PE
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPE 180
Query: 568 YYV-LNWLNEKSDVYSFGVVLLEIITGR 594
+ + + D++S G + E++T R
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 34/226 (15%)
Query: 397 KITNNFER--VLGKGGFGEVYHG-SLDDNQQVAVKMLSSS---CCFQLLQVKLLMRVHHR 450
+ ++FE VLG+G FG+V + D++ A+K + + L +V LL ++H+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 451 NLTALIGYCIEGNN----MGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDS----- 501
+ +E N M + + +Y + + + L E L D
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-------IFSIE------ 548
Q LE L Y I+HRD+K NI ++E KI DFGL++ I ++
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 549 SSDQISTAVAGTPGYLDPEYYVLN---WLNEKSDVYSFGVVLLEII 591
SSD +++A+ GT Y+ E VL+ NEK D+YS G++ E+I
Sbjct: 183 SSDNLTSAI-GTAMYVATE--VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++ V+
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ K+ADFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 397 KITNNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRV 447
+ NF++V +G+G +G VY + VA+K + + ++ LL +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
+H N+ L+ N + L++E++ L +++ + QGL +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
H ++HRD+K N+L+N + K+ADFGL+R F + V T Y PE
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPE 180
Query: 568 YYV-LNWLNEKSDVYSFGVVLLEIITGR 594
+ + + D++S G + E++T R
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 13/175 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E ++ G L +L K+ L E Q
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLK 122
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK----LQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L +K + K+ DFG++ IE+ ++
Sbjct: 123 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKN 177
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THIS 609
+ GTP ++ PE L ++D++S GV+ +++G P + + +T T+IS
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 231
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY G + +L+ G+ QI + EY
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 157
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N++++++ K+ DFG ++ + + GTP YL PE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 209
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 13/175 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E ++ G L +L K+ L E Q
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLK 115
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK----LQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L +K + K+ DFG++ IE+ ++
Sbjct: 116 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKN 170
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THIS 609
+ GTP ++ PE L ++D++S GV+ +++G P + + +T T+IS
Sbjct: 171 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 224
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + C L ++K+L+ H N+ + I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 148
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ FER+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+ G + +L+ G+ QI + EY
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 177
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 229
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 177
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 399 TNNFERV--LGKGGFGEVYHG-SLDDNQQVAVKM---------LSSSCCFQLLQVKLLMR 446
T+ +E V +G G +G VY VA+K L S ++ ++ L
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 447 VHHRNLTALIGYCIEGN-----NMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDS 501
H N+ L+ C + L++E++ L YL L +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP 561
+GL++LH C IVHRD+K NIL+ K+ADFGL+RI+S + + V T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA---LFPVVVTL 175
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVI 598
Y PE + + D++S G + E+ R+P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 178
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 13/175 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E ++ G L +L K+ L E Q
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLK 136
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK----LQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L +K + K+ DFG++ IE+ ++
Sbjct: 137 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH--KIEAGNEFKN 191
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THIS 609
+ GTP ++ PE L ++D++S GV+ +++G P + + +T T+IS
Sbjct: 192 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 245
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 178
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 178
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ ++ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAGYPPFFA 240
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 35/214 (16%)
Query: 406 LGKGGFGEVYHGSLDD-NQQVAVKML----SSSCCFQLLQVKLLMRVHHRN--------- 451
LG GG G V+ +D +++VA+K + S L ++K++ R+ H N
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 452 -----LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGK--KEHMLNWVERLQIAVDSAQG 504
LT +G E N++ ++ EYM + + +G +EH ++ +L +G
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQL------LRG 132
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQ--ISTAVAGTP 561
L+Y+H ++HRD+K +N+ +N E L KI DFGL+RI S + +S + T
Sbjct: 133 LKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TK 188
Query: 562 GYLDPEYYV-LNWLNEKSDVYSFGVVLLEIITGR 594
Y P + N + D+++ G + E++TG+
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 180
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 403 ERVLGKGGFGEVYHG-SLDDNQQVAVKMLSS------SCCFQLLQVKLLMRVH-HRNLTA 454
E VLG+G V +L +Q+ AVK++ S F+ +V++L + HRN+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFR--EVEMLYQCQGHRNVLE 75
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
LI + E + L++E M G++ ++ K+ H N +E + D A L++LH
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIH-KRRH-FNELEASVVVQDVASALDFLH---NK 130
Query: 515 PIVHRDVKSSNILL---NEKLQAKIADFGLSRIFSIES-SDQIST----AVAGTPGYLDP 566
I HRD+K NIL N+ KI DF L + IST G+ Y+ P
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 567 EYYVLNWLNEKSDVY-------SFGVVLLEIITGRRPVISRAEDDT 605
E V+ +E++ +Y S GV+L +++G P + R D
Sbjct: 191 E--VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 175
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 400 NNFE--RVLGKGGFGEVYH----GSLDDNQQVAVKMLSSSCCFQLLQV--------KLLM 445
NFE +VLG G +G+V+ D + A+K+L + Q + ++L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 446 RVHHRNLTALIGYCIEG-NNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV-DSAQ 503
+ + Y + + LI +Y+ G L +L ++ + V QI V +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEV---QIYVGEIVL 170
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY 563
LE+LH K I++RD+K NILL+ + DFGLS+ F + +++ + GT Y
Sbjct: 171 ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER-AYDFCGTIEY 226
Query: 564 LDPEYYVL--NWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ P+ + ++ D +S GV++ E++TG P E ++
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS 270
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 52/268 (19%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCF---QLLQVKLLMRVHHRNLTALIGY 458
+G+G FGEV+ Q+VA+K M + F L ++K+L + H N+ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 459 CIEGNN-----MGLIY------EYMASGTLDQYLKGKKEHMLNWVER-LQIAVDSAQGLE 506
C + G IY E+ +G L L + L+ ++R +Q+ ++ GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLN---GLY 139
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV--AGTPGYL 564
Y+H + I+HRD+K++N+L+ K+ADFGL+R FS+ + Q + T Y
Sbjct: 140 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 565 DPEYYVLNWLNEKS-----DVYSFGVVLLEIITGRRPVI--SRAEDDTTHISQWVNSMLA 617
PE L E+ D++ G ++ E+ T R P++ + + ISQ S
Sbjct: 197 PPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGS--- 248
Query: 618 EGDIRNIVDPSLQGNFDNNSAWKAVELA 645
+ P + N DN ++ +EL
Sbjct: 249 -------ITPEVWPNVDNYELYEKLELV 269
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 175
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH- 120
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 121 --SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 60 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 116
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 117 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH 173
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T + + M
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 233
Query: 616 LAEG----DIRNIVDPSLQGNFDNNSAWKAVELAL 646
++ ++++ + +N + AVEL L
Sbjct: 234 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 516 IVHRDVKSSNILLNEKLQA---KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
IVHRD+K N+LL K + K+ADFGL+ ++ Q AGTPGYL PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKD 181
Query: 573 WLNEKSDVYSFGVVLLEIITGRRP 596
+ D+++ GV+L ++ G P
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 31/208 (14%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLS----SSCCFQLLQ--VKLLMRVHHRNLTALIGY 458
LGKG F V + Q+ A K+++ S+ Q L+ ++ + H N+ L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 459 CIEGNNMGLIYEYMASGTL-------DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYG 511
E L+++ + G L + Y + H + Q LE +++
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ------------QILESVNHC 119
Query: 512 CKPPIVHRDVKSSNILLNEKLQA---KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
IVHRD+K N+LL K + K+ADFGL+ ++ Q AGTPGYL PE
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 569 YVLNWLNEKSDVYSFGVVLLEIITGRRP 596
+ + D+++ GV+L ++ G P
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 440 QVKLLMRVHHRNLTALIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVE 493
++ LL V+H+N+ +L+ E ++ L+ E M L Q + + +H E
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDH-----E 124
Query: 494 RLQ-IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
R+ + G+++LH I+HRD+K SNI++ KI DFGL+R S++
Sbjct: 125 RMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNF 178
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWV 612
+ T T Y PE + E D++S G ++ E++ G VI + D HI QW
Sbjct: 179 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGS--VIFQGTD---HIDQW- 232
Query: 613 NSMLAE-----GDIRNIVDPSLQGNFDNNSAWKAV 642
N ++ + + + P+++ +N A+ +
Sbjct: 233 NKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGI 267
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 405 VLGKGGFGEVYHGSLDDNQQVAVKMLSSS-------CCFQLLQVKLLMRVHHRNLTALIG 457
++GKG FG+VYHG + +VA++++ F+ +V + H N+ +G
Sbjct: 40 LIGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQLKAFK-REVMAYRQTRHENVVLFMG 96
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
C+ ++ +I TL ++ K +L+ + QIA + +G+ YLH I+
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKI-VLDVNKTRQIAQEIVKGMGYLH---AKGIL 152
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYL------------- 564
H+D+KS N+ + + I DFGL I + + + + G+L
Sbjct: 153 HKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 565 DPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW-VNSMLAEGDIRN 623
D E L ++ SDV++ G + E+ H +W + AE I
Sbjct: 212 DTEEDKLP-FSKHSDVFALGTIWYEL----------------HAREWPFKTQPAEAIIWQ 254
Query: 624 IVDPSLQGNFDNNSAWKAV-ELALACASHTSSERPTMTDVLMELKECL 670
+ ++ N K + ++ L C + ERPT T LM++ E L
Sbjct: 255 M-GTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTK-LMDMLEKL 300
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKE-HMLNWVERLQIAVDSAQGLEYLH 509
N+ L+ N + L++E++ DQ LK + L + I Q L+ L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHV-----DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
+ ++HRD+K N+L+N + K+ADFGL+R F + V T Y PE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEIL 178
Query: 570 V-LNWLNEKSDVYSFGVVLLEIITGR 594
+ + + D++S G + E++T R
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 74 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 130
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 131 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T + + M
Sbjct: 188 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 247
Query: 616 LAEG----DIRNIVDPSLQGNFDNNSAWKAVELAL 646
++ ++++ + +N + AVEL L
Sbjct: 248 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 282
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 36/236 (15%)
Query: 394 EIQKITNNFE--RVLGKGGFGEVYHGSLDDNQQV-AVKML--------SSSCCFQLLQVK 442
E++ ++FE +V+G+G F EV + QV A+K++ CF+ +
Sbjct: 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE-ERD 113
Query: 443 LLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIA---- 498
+L+ R +T L + N + L+ EY G L L E + + R +A
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 499 -VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+DS L Y VHRD+K NILL+ ++ADFG + + + + V
Sbjct: 174 AIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFG--SCLKLRADGTVRSLV 222
Query: 558 A-GTPGYLDPEYY-------VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
A GTP YL PE + D ++ GV E+ G+ P + + +T
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET 278
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 76 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 132
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 133 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T + + M
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 249
Query: 616 LAEG----DIRNIVDPSLQGNFDNNSAWKAVELAL 646
++ ++++ + +N + AVEL L
Sbjct: 250 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ---QVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
LG+G FGEV+ + D Q Q AVK + F++ ++ + + L G EG
Sbjct: 80 LGRGSFGEVHR--MKDKQTGFQCAVKKVRLEV-FRVEELVACAGLSSPRIVPLYGAVREG 136
Query: 463 NNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVK 522
+ + E + G+L Q +K + L L + +GLEYLH I+H DVK
Sbjct: 137 PWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVK 191
Query: 523 SSNILL-NEKLQAKIADFGLSRIF---SIESSDQISTAVAGTPGYLDPEYYVLNWLNEKS 578
+ N+LL ++ +A + DFG + + S + GT ++ PE + + K
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 251
Query: 579 DVYSFGVVLLEIITGRRP 596
D++S ++L ++ G P
Sbjct: 252 DIWSSCCMMLHMLNGCHP 269
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 76 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 132
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 133 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T + + M
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 249
Query: 616 LAEG----DIRNIVDPSLQGNFDNNSAWKAVELAL 646
++ ++++ + +N + AVEL L
Sbjct: 250 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 284
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L ++ + QGL + H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLHQD-LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 179
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ-QVAVKMLS-----SSCCFQLLQVKLLMRVHHRNLTAL--IG 457
+G+G +G V + N+ +VA+K +S + L ++K+L+R H N+ + I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
M +Y D Y K +H+ N +GL+Y+H ++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN-DHICYFLYQILRGLKYIHSAN---VL 150
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ-ISTAVAGTPGYLDPEYYVLNWLNE 576
HRD+K SN+LLN KI DFGL+R+ + T T Y PE + +
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 577 KS-DVYSFGVVLLEIITGR 594
KS D++S G +L E+++ R
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 60 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 116
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 117 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 173
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T + + M
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 233
Query: 616 LAEG----DIRNIVDPSLQGNFDNNSAWKAVELAL 646
++ ++++ + +N + AVEL L
Sbjct: 234 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 268
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L ++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 122 HR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 418 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 474
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 475 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T + + M
Sbjct: 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 591
Query: 616 LAEG----DIRNIVDPSLQGNFDNNSAWKAVELAL 646
++ ++++ + +N + AVEL L
Sbjct: 592 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 626
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 52/268 (19%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCF---QLLQVKLLMRVHHRNLTALIGY 458
+G+G FGEV+ Q+VA+K M + F L ++K+L + H N+ LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 459 CIEGNN-----MGLIY------EYMASGTLDQYLKGKKEHMLNWVER-LQIAVDSAQGLE 506
C + G IY E+ +G L L + L+ ++R +Q+ ++ GL
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLN---GLY 138
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV--AGTPGYL 564
Y+H + I+HRD+K++N+L+ K+ADFGL+R FS+ + Q + T Y
Sbjct: 139 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 565 DPEYYVLNWLNEKS-----DVYSFGVVLLEIITGRRPVI--SRAEDDTTHISQWVNSMLA 617
PE L E+ D++ G ++ E+ T R P++ + + ISQ S
Sbjct: 196 PPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGS--- 247
Query: 618 EGDIRNIVDPSLQGNFDNNSAWKAVELA 645
+ P + N DN ++ +EL
Sbjct: 248 -------ITPEVWPNVDNYELYEKLELV 268
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 54 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 110
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 111 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T + + M
Sbjct: 168 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 227
Query: 616 LAEG----DIRNIVDPSLQGNFDNNSAWKAVELAL 646
++ ++++ + +N + AVEL L
Sbjct: 228 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 262
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 52/268 (19%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCF---QLLQVKLLMRVHHRNLTALIGY 458
+G+G FGEV+ Q+VA+K M + F L ++K+L + H N+ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 459 CIEGNN-----MGLIY------EYMASGTLDQYLKGKKEHMLNWVER-LQIAVDSAQGLE 506
C + G IY E+ +G L L + L+ ++R +Q+ ++ GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLN---GLY 139
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV--AGTPGYL 564
Y+H + I+HRD+K++N+L+ K+ADFGL+R FS+ + Q + T Y
Sbjct: 140 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 565 DPEYYVLNWLNEKS-----DVYSFGVVLLEIITGRRPVI--SRAEDDTTHISQWVNSMLA 617
PE L E+ D++ G ++ E+ T R P++ + + ISQ S
Sbjct: 197 PPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGS--- 248
Query: 618 EGDIRNIVDPSLQGNFDNNSAWKAVELA 645
+ P + N DN ++ +EL
Sbjct: 249 -------ITPEVWPNVDNYELYEKLELV 269
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 56 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 112
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 113 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T +M
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-------AM 222
Query: 616 LAEG-----------DIRNIVDPSLQGNFDNNSAWKAVELAL 646
L +G ++ ++++ + +N + AVEL L
Sbjct: 223 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP YL P
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPA 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 419 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 475
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 476 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 532
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T + + M
Sbjct: 533 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 592
Query: 616 LAEG----DIRNIVDPSLQGNFDNNSAWKAVELAL 646
++ ++++ + +N + AVEL L
Sbjct: 593 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 627
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 438 LLQVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQI 497
L + ++ ++ + + +IG C E + L+ E G L++YL+ + H+ + +++
Sbjct: 66 LAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-QNRHVKD-KNIIEL 122
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV 557
+ G++YL + VHRD+ + N+LL + AKI+DFGLS+ + + +
Sbjct: 123 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 558 AGTP-GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHISQWVNSM 615
P + PE + KSDV+SFGV++ E + G++P + T + + M
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM 239
Query: 616 LAEG----DIRNIVDPSLQGNFDNNSAWKAVELAL 646
++ ++++ + +N + AVEL L
Sbjct: 240 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 274
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y L+ N VA+K LS Q ++ L+ V+H+N+ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ ++ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDH-----ERMSYLLYQMLVGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S GV++ E+I G T HI QW
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG-----GVLFPGTDHIDQW 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y L+ N VA+K LS Q ++ L+ V+H+N+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ ++ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDH-----ERMSYLLYQMLVGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S GV++ E+I G T HI QW
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG-----GVLFPGTDHIDQW 234
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 68/276 (24%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVK---MLSSSCCF---QLLQVKLLMRVHHRNLTALIGY 458
+G+G FGEV+ Q+VA+K M + F L ++K+L + H N+ LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 459 C--------------------IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIA 498
C E + GL+ + TL + +K + +LN
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE-IKRVMQMLLN-------- 136
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAV- 557
GL Y+H + I+HRD+K++N+L+ K+ADFGL+R FS+ + Q +
Sbjct: 137 -----GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 558 -AGTPGYLDPEYYVLNWLNEKS-----DVYSFGVVLLEIITGRRPVI--SRAEDDTTHIS 609
T Y PE L E+ D++ G ++ E+ T R P++ + + IS
Sbjct: 189 RVVTLWYRPPELL----LGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALIS 243
Query: 610 QWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELA 645
Q S + P + N DN ++ +EL
Sbjct: 244 QLCGS----------ITPEVWPNVDNYELYEKLELV 269
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVA----VKMLSSS---CCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY +V +++ + + + ++ LL ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 400 NNFERV--LGKGGFGEVYHGSLDDNQQVA----VKMLSSS---CCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY +V +++ + + + ++ LL ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
N+ L+ N + L++E++ L +++ + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
++HRD+K N+L+N + K+ADFGL+R F + V T Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 571 -LNWLNEKSDVYSFGVVLLEIITGR 594
+ + D++S G + E++T R
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ---QVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+G+G FGEV+ + D Q Q AVK + F++ ++ + + L G EG
Sbjct: 66 VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEV-FRVEELVACAGLSSPRIVPLYGAVREG 122
Query: 463 NNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVK 522
+ + E + G+L Q +K + L L + +GLEYLH I+H DVK
Sbjct: 123 PWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVK 177
Query: 523 SSNILL-NEKLQAKIADFGLSRIF---SIESSDQISTAVAGTPGYLDPEYYVLNWLNEKS 578
+ N+LL ++ +A + DFG + + S + GT ++ PE + + K
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 237
Query: 579 DVYSFGVVLLEIITGRRP 596
D++S ++L ++ G P
Sbjct: 238 DIWSSCCMMLHMLNGCHP 255
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 400 NNFERV--LGKGGFGEVYHGSLD-DNQQVAVKML------SSSCCFQLLQVKLLMRVHHR 450
NF++V +G+G +G VY + VA+K + + ++ LL ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 451 NLTALIGYCIEGNNMGLIYEYM---------ASGTLDQYLKGKKEHMLNWVERLQIAVDS 501
N+ L+ N + L++E++ AS L K ++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLL--------- 112
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP 561
QGL + H ++HRD+K N+L+N + K+ADFGL+R F + V T
Sbjct: 113 -QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TL 166
Query: 562 GYLDPEYYV-LNWLNEKSDVYSFGVVLLEIITGR 594
Y PE + + + D++S G + E++T R
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 400 NNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQV-------KLLMRVHH 449
+ F+R+ LG G FG V + A+K+L +L Q+ ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLK--GKKEHMLNWVERLQIAVDSAQGLEY 507
L L + +N+ ++ EY+A G + +L+ G+ QI + EY
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEY 156
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH +++RD+K N+L++++ ++ DFG ++ + + GTP L PE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPE 208
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVIS 599
+ N+ D ++ GV++ E+ G P +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 28/248 (11%)
Query: 403 ERVLGKGGFG---EVYHGSLDDNQQVAVKMLSS--SCCFQLLQVKLLMRVHHRNLTALIG 457
++ LG+G F + H NQ AVK++S Q L + H N+ L
Sbjct: 16 DKPLGEGSFSICRKCVHKK--SNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHE 73
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIV 517
+ + L+ E + G L + +K KK + E I + ++H +V
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMH---DVGVV 128
Query: 518 HRDVKSSNILL---NEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
HRD+K N+L N+ L+ KI DFG +R+ +Q T Y PE N
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAPELLNQNGY 186
Query: 575 NEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFD 634
+E D++S GV+L +++G+ P S T + + + +GD S +G
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF------SFEG--- 237
Query: 635 NNSAWKAV 642
AWK V
Sbjct: 238 --EAWKNV 243
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 438 LLQVKLLMRVH-HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ 496
L +V +L +V H N+ L L+++ M G L YL K L+ E +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRK 128
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
I + + LH K IVHRD+K NILL++ + K+ DFG S ++ +++ +
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR-S 182
Query: 557 VAGTPGYLDPEYYVLNW------LNEKSDVYSFGVVLLEIITGRRPVISRAE 602
V GTP YL PE + ++ D++S GV++ ++ G P R +
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 406 LGKGGFGEVYHGSLD-DNQQVAVKMLSSS------CCFQLLQVKLLMRVHHRNLTAL--- 455
+G G +G V QQVA+K + ++ L ++K+L H N+ A+
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 456 ----IGYCIEGNNMGLIYEYMASGTLDQYLKGKK----EHMLNWVERLQIAVDSAQGLEY 507
+ Y E ++ ++ + M S L Q + + EH+ ++ +L +GL+Y
Sbjct: 123 LRPTVPYG-EFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL------LRGLKY 174
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ--ISTAVAGTPGYLD 565
+H ++HRD+K SN+L+NE + KI DFG++R ++ T T Y
Sbjct: 175 MHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 566 PEYYV-LNWLNEKSDVYSFGVVLLEIITGRR 595
PE + L+ + D++S G + E++ R+
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 422 NQQVAVKMLSSSCCFQLLQVKLLMRV-HHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQ 479
N + AVK++ S ++++L+R H N+ L +G + ++ E M G L D+
Sbjct: 47 NMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDK 106
Query: 480 YLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKL----QAK 535
L+ K + E + + +EYLH +VHRD+K SNIL ++ +
Sbjct: 107 ILRQK---FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIR 160
Query: 536 IADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRR 595
I DFG ++ E+ ++ T ++ PE + D++S GV+L ++TG
Sbjct: 161 ICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
Query: 596 PVISRAEDDT 605
P + DDT
Sbjct: 219 P-FANGPDDT 227
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQ---QVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEG 462
+G+G FGEV+ + D Q Q AVK + F++ ++ + + L G EG
Sbjct: 82 VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEV-FRVEELVACAGLSSPRIVPLYGAVREG 138
Query: 463 NNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVK 522
+ + E + G+L Q +K + L L + +GLEYLH I+H DVK
Sbjct: 139 PWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVK 193
Query: 523 SSNILL-NEKLQAKIADFGLSRIF---SIESSDQISTAVAGTPGYLDPEYYVLNWLNEKS 578
+ N+LL ++ +A + DFG + + S + GT ++ PE + + K
Sbjct: 194 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 253
Query: 579 DVYSFGVVLLEIITGRRP 596
D++S ++L ++ G P
Sbjct: 254 DIWSSCCMMLHMLNGCHP 271
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 406 LGKGGFGEVYHGSLD-DNQQVAVKMLSSS------CCFQLLQVKLLMRVHHRNLTAL--- 455
+G G +G V QQVA+K + ++ L ++K+L H N+ A+
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 456 ----IGYCIEGNNMGLIYEYMASGTLDQYLKGKK----EHMLNWVERLQIAVDSAQGLEY 507
+ Y E ++ ++ + M S L Q + + EH+ ++ +L +GL+Y
Sbjct: 122 LRPTVPYG-EFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL------LRGLKY 173
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ--ISTAVAGTPGYLD 565
+H ++HRD+K SN+L+NE + KI DFG++R ++ T T Y
Sbjct: 174 MHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 566 PEYYV-LNWLNEKSDVYSFGVVLLEIITGRR 595
PE + L+ + D++S G + E++ R+
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y LD N VA+K LS Q ++ L+ V+H+N+ +L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ L+ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDH-----ERMSYLLYQMLXGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 234
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 120
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 121 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 175
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 176 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 224
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 120
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 121 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 175
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 176 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 224
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 438 LLQVKLLMRVH-HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ 496
L +V +L +V H N+ L L+++ M G L YL K L+ E +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRK 128
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
I + + LH K IVHRD+K NILL++ + K+ DFG S ++ +++
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR-E 182
Query: 557 VAGTPGYLDPEYYVLNW------LNEKSDVYSFGVVLLEIITGRRPVISRAE 602
V GTP YL PE + ++ D++S GV++ ++ G P R +
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 234
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 438 LLQVKLLMRVH-HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ 496
L +V +L +V H N+ L L+++ M G L YL K L+ E +
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRK 115
Query: 497 IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTA 556
I + + LH K IVHRD+K NILL++ + K+ DFG S ++ +++
Sbjct: 116 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLR-E 169
Query: 557 VAGTPGYLDPEYYVLNW------LNEKSDVYSFGVVLLEIITGRRPVISRAE 602
V GTP YL PE + ++ D++S GV++ ++ G P R +
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 221
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 397 KITNNFER--VLGKGGFGEVYHG-SLDDNQQVAVKMLSSS---CCFQLLQVKLLMRVHHR 450
+ ++FE VLG+G FG+V + D++ A+K + + L +V LL ++H+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 451 NLTALIGYCIEGNNM----GLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDS----- 501
+ +E N + + +Y + + + L E L D
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR-------IFSIE------ 548
Q LE L Y I+HR++K NI ++E KI DFGL++ I ++
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 549 SSDQISTAVAGTPGYLDPEYYVLN---WLNEKSDVYSFGVVLLEII 591
SSD +++A+ GT Y+ E VL+ NEK D YS G++ E I
Sbjct: 183 SSDNLTSAI-GTAXYVATE--VLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCC-----FQLLQVKLLMRVHHRNLTALIG 457
RV+G+G + +V L ++ A++++ +Q + + N L+G
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 458 Y--CIEGNN-MGLIYEYMASGTLDQYLKGKK----EHMLNWVERLQIAVDSAQGLEYLHY 510
C + + + + EY+ G L +++ ++ EH + + +A L YLH
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLH- 170
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
+ I++RD+K N+LL+ + K+ D+G+ + + D ST GTP Y+ PE
Sbjct: 171 --ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTST-FCGTPNYIAPEILR 226
Query: 571 LNWLNEKSDVYSFGVVLLEIITGRRP--VISRAEDDTTHISQWVNSMLAEGDIR 622
D ++ GV++ E++ GR P ++ +++ + ++ ++ E IR
Sbjct: 227 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 43/202 (21%)
Query: 484 KKEHMLNWVER------------LQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK 531
+KE++ +W+ R L I + A+ +E+LH ++HRD+K SNI
Sbjct: 144 RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMD 200
Query: 532 LQAKIADFGLSRIFSIESSDQ----------ISTAVAGTPGYLDPEYYVLNWLNEKSDVY 581
K+ DFGL + +Q GT Y+ PE N + K D++
Sbjct: 201 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIF 260
Query: 582 SFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKA 641
S G++L E++ + R T D+RN+ P L F +
Sbjct: 261 SLGLILFELLYSFSTQMERVRIIT--------------DVRNLKFPLL---FTQKYPQEH 303
Query: 642 VELALACASHTSSERPTMTDVL 663
+ + S + +ERP TD++
Sbjct: 304 M-MVQDMLSPSPTERPEATDII 324
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 42/219 (19%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQL-------------LQVKLLMRVHH 449
+ LG G GEV ++VA+K++S F + ++++L +++H
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPALNVETEIEILKKLNH 73
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV------DSAQ 503
+ + + + + ++ E M G L + G K RL+ A
Sbjct: 74 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLL 124
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
++YLH + I+HRD+K N+LL+ E KI DFG S+I E+S + + GT
Sbjct: 125 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETS--LMRTLCGT 178
Query: 561 PGYLDPEYYV---LNWLNEKSDVYSFGVVLLEIITGRRP 596
P YL PE V N D +S GV+L ++G P
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 42/219 (19%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQL-------------LQVKLLMRVHH 449
+ LG G GEV ++VA+K++S F + ++++L +++H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPALNVETEIEILKKLNH 74
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV------DSAQ 503
+ + + + + ++ E M G L + G K RL+ A
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLL 125
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
++YLH + I+HRD+K N+LL+ E KI DFG S+I E+S + + GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETS--LMRTLCGT 179
Query: 561 PGYLDPEYYV---LNWLNEKSDVYSFGVVLLEIITGRRP 596
P YL PE V N D +S GV+L ++G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 42/219 (19%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQL-------------LQVKLLMRVHH 449
+ LG G GEV ++VA+K++S F + ++++L +++H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPALNVETEIEILKKLNH 74
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV------DSAQ 503
+ + + + + ++ E M G L + G K RL+ A
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLL 125
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
++YLH + I+HRD+K N+LL+ E KI DFG S+I E+S + + GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETS--LMRTLCGT 179
Query: 561 PGYLDPEYYV---LNWLNEKSDVYSFGVVLLEIITGRRP 596
P YL PE V N D +S GV+L ++G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y LD N VA+K LS Q ++ L+ V+H+N+ +L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ L+ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDH-----ERMSYLLYQMLXGIKHLH 136
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 137 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 190
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 227
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y LD N VA+K LS Q ++ L+ V+H+N+ +L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ L+ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDH-----ERMSYLLYQMLXGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 234
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 42/219 (19%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQL-------------LQVKLLMRVHH 449
+ LG G GEV ++VA+K++S F + ++++L +++H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPALNVETEIEILKKLNH 74
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV------DSAQ 503
+ + + + + ++ E M G L + G K RL+ A
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLL 125
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
++YLH + I+HRD+K N+LL+ E KI DFG S+I E+S + + GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETS--LMRTLCGT 179
Query: 561 PGYLDPEYYV---LNWLNEKSDVYSFGVVLLEIITGRRP 596
P YL PE V N D +S GV+L ++G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y LD N VA+K LS Q ++ L+ V+H+N+ +L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ L+ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDH-----ERMSYLLYQMLCGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 234
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L + H N+ L ++ LI E +A G L +L K+ L E +
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLK 121
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNE----KLQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L + K + KI DFGL+ I+ ++
Sbjct: 122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKN 176
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 177 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L +V H N+ L ++ LI E ++ G L +L K+ L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK----LQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L +K K+ DFGL+ IE +
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN 177
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L +V H N+ L ++ LI E ++ G L +L K+ L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK----LQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L +K K+ DFGL+ IE +
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN 177
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y L+ N VA+K LS Q ++ L+ V+H+N+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ ++ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDH-----ERMSYLLYQMLVGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E+I G T HI QW
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQW 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L +V H N+ L ++ LI E ++ G L +L K+ L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK----LQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L +K K+ DFGL+ IE +
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN 177
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L +V H N+ L ++ LI E ++ G L +L K+ L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK----LQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L +K K+ DFGL+ IE +
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN 177
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 28/230 (12%)
Query: 400 NNF----ERVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
NNF + LG+G F V S Q+ A K L Q + ++L H +
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEIL---HEIAVLE 83
Query: 455 LIGYCIEGNNMG----------LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQG 504
L C N+ LI EY A G + + M++ + +++ +G
Sbjct: 84 LAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEG 143
Query: 505 LEYLHYGCKPPIVHRDVKSSNILLNEKL---QAKIADFGLSRIFSIESSDQISTAVAGTP 561
+ YLH + IVH D+K NILL+ KI DFG+SR I + ++ + GTP
Sbjct: 144 VYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGTP 197
Query: 562 GYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT-THISQ 610
YL PE + + +D+++ G++ ++T P + +T +ISQ
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ 247
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR--IFSIESSDQI 553
+I + + + L +L K I+HRD+K SNILL+ K+ DFG+S + SI +
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 554 STAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
P +DP + + +SDV+S G+ L E+ TGR P
Sbjct: 187 GCRPYMAPERIDPSASRQGY-DVRSDVWSLGITLYELATGRFP 228
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L +V H N+ L ++ LI E ++ G L +L K+ L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK----LQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L +K K+ DFGL+ IE +
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN 177
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 42/219 (19%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQL-------------LQVKLLMRVHH 449
+ LG G GEV ++VA+K++S F + ++++L +++H
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRK-FAIGSAREADPALNVETEIEILKKLNH 80
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV------DSAQ 503
+ + + + + ++ E M G L + G K RL+ A
Sbjct: 81 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLL 131
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
++YLH + I+HRD+K N+LL+ E KI DFG S+I E+S + + GT
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETS--LMRTLCGT 185
Query: 561 PGYLDPEYYV---LNWLNEKSDVYSFGVVLLEIITGRRP 596
P YL PE V N D +S GV+L ++G P
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQL-------------LQVKLLMRVHH 449
+ LG G GEV ++VA++++S F + ++++L +++H
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRK-FAIGSAREADPALNVETEIEILKKLNH 199
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV------DSAQ 503
+ + + + + ++ E M G L + G K RL+ A
Sbjct: 200 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLL 250
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
++YLH + I+HRD+K N+LL+ E KI DFG S+I S + + GT
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGT 304
Query: 561 PGYLDPEYYV---LNWLNEKSDVYSFGVVLLEIITGRRP 596
P YL PE V N D +S GV+L ++G P
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 37/216 (17%)
Query: 402 FERVLGKGGFGEVYHGSLDD--------NQQVAVKMLS------SSCCFQLLQVKLLMRV 447
F LG+G F +++ G + +V +K+L S F+ ++ ++
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE--AASMMSKL 69
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
H++L G C+ G+ L+ E++ G+LD YLK K ++ +N + +L++A A + +
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHF 128
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQ--------AKIADFGLSRIFSIESSDQISTAVAG 559
L ++H +V + NILL + K++D G+S ++ D + +
Sbjct: 129 LEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS--ITVLPKDILQERIPW 183
Query: 560 TPGYL--DPEYYVLNWLNEKSDVYSFGVVLLEIITG 593
P +P+ LN +D +SFG L EI +G
Sbjct: 184 VPPECIENPKN-----LNLATDKWSFGTTLWEICSG 214
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQL-------------LQVKLLMRVHH 449
+ LG G GEV ++VA++++S F + ++++L +++H
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRK-FAIGSAREADPALNVETEIEILKKLNH 213
Query: 450 RNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV------DSAQ 503
+ + + + + ++ E M G L + G K RL+ A
Sbjct: 214 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK--------RLKEATCKLYFYQMLL 264
Query: 504 GLEYLHYGCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
++YLH + I+HRD+K N+LL+ E KI DFG S+I S + + GT
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGT 318
Query: 561 PGYLDPEYYV---LNWLNEKSDVYSFGVVLLEIITGRRP 596
P YL PE V N D +S GV+L ++G P
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y L+ N VA+K LS Q ++ L+ V+H+N+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ ++ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDH-----ERMSYLLYQMLCGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E+I G T HI QW
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQW 234
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 422 NQQVAVKMLSSSCCFQLLQVKLLMRV-HHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQ 479
N + AVK++ S ++++L+R H N+ L +G ++ L+ E M G L D+
Sbjct: 52 NMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDK 111
Query: 480 YLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQ----AK 535
L+ K + E + + +EYLH +VHRD+K SNIL ++ +
Sbjct: 112 ILRQK---FFSEREASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLR 165
Query: 536 IADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRR 595
I DFG ++ E+ ++ T ++ PE +E D++S G++L ++ G
Sbjct: 166 ICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 596 PVISRAEDDTTHISQWVNS 614
P + D I + S
Sbjct: 224 PFANGPSDTPEEILTRIGS 242
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALIGYC 459
+G+G +G VY + + A+K + + ++ +L + H N+ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ L++E+ LDQ LK + +E + Q L + Y ++HR
Sbjct: 70 HTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKS- 578
D+K N+L+N + + KIADFGL+R F I V T Y P+ VL + S
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPD--VLMGSKKYST 180
Query: 579 --DVYSFGVVLLEIITGRR--PVISRAE 602
D++S G + E++ G P +S A+
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP 561
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A P
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLP 256
Query: 562 -GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ PE +SDV+SFGV+L EI +
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP 561
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A P
Sbjct: 203 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLP 258
Query: 562 -GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ PE +SDV+SFGV+L EI +
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 440 QVKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV 499
+V +L +V H N+ L ++ LI E ++ G L +L K+ L+ E
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIK 122
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEK----LQAKIADFGLSRIFSIESSDQIST 555
G+ YLH I H D+K NI+L +K K+ DFGL+ IE +
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN 177
Query: 556 AVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDT 605
+ GTP ++ PE L ++D++S GV+ +++G P + + +T
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 422 NQQVAVKMLSSSCCFQLLQVKLLMRV-HHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQ 479
N + AVK++ S ++++L+R H N+ L +G ++ L+ E M G L D+
Sbjct: 52 NMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDK 111
Query: 480 YLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQ----AK 535
L+ K + E + + +EYLH +VHRD+K SNIL ++ +
Sbjct: 112 ILRQK---FFSEREASFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLR 165
Query: 536 IADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRR 595
I DFG ++ E+ ++ T ++ PE +E D++S G++L ++ G
Sbjct: 166 ICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 596 PVISRAEDDTTHISQWVNS 614
P + D I + S
Sbjct: 224 PFANGPSDTPEEILTRIGS 242
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALIGYC 459
+G+G +G VY + + A+K + + ++ +L + H N+ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ L++E+ LDQ LK + +E + Q L + Y ++HR
Sbjct: 70 HTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKS- 578
D+K N+L+N + + KIADFGL+R F I V T Y P+ VL + S
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPD--VLMGSKKYST 180
Query: 579 --DVYSFGVVLLEIITGRR--PVISRAE 602
D++S G + E++ G P +S A+
Sbjct: 181 TIDIWSVGCIFAEMVNGAPLFPGVSEAD 208
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 19/244 (7%)
Query: 392 YSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQVAVKMLSSSCCFQLL-----QVKLLM 445
Y E+ K E + G GGF +V + + VA+K++ + L +++ L
Sbjct: 5 YDELLKYYELHETI-GTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 446 RVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
+ H+++ L N + ++ EY G L Y+ + L+ E + +
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAV 121
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLD 565
Y+H HRD+K N+L +E + K+ DFGL + T G+ Y
Sbjct: 122 AYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC-CGSLAYAA 177
Query: 566 PEYYV-LNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRNI 624
PE ++L ++DV+S G++L ++ G P DD ++ + M + D+
Sbjct: 178 PELIQGKSYLGSEADVWSMGILLYVLMCGFLPF-----DDDNVMALYKKIMRGKYDVPKW 232
Query: 625 VDPS 628
+ PS
Sbjct: 233 LSPS 236
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP 561
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A P
Sbjct: 210 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLP 265
Query: 562 -GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ PE +SDV+SFGV+L EI +
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP 561
A+G+E+L +HRD+ + NILL+EK KI DFGL+R + D + A P
Sbjct: 208 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLP 263
Query: 562 -GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ PE +SDV+SFGV+L EI +
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y L+ N VA+K LS Q ++ L+ V+H+N+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ ++ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDH-----ERMSYLLYQMLCGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E+I G T HI QW
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQW 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAV-KMLSSSCCFQLLQVK----LLMRVHHRNLTALIGYCI 460
LG G FG V+ +V V K +++ VK ++ ++HH L L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 461 EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRD 520
+ M LI E+++ G L + + ++ ++ E + + +GL+++H + IVH D
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLD 174
Query: 521 VKSSNILLNEKLQA--KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKS 578
+K NI+ K + KI DFGL+ + D+I T + PE + +
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKL---NPDEIVKVTTATAEFAAPEIVDREPVGFYT 231
Query: 579 DVYSFGVVLLEIITGRRPVISRAEDD 604
D+++ GV+ +++G P EDD
Sbjct: 232 DMWAIGVLGYVLLSGLSPFA--GEDD 255
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y L+ N VA+K LS Q ++ L+ V+H+N+ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ ++ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDH-----ERMSYLLYQMLCGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E+I G T HI QW
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQW 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKML-----SSSCCFQLLQVK----LLMRVHHRNLTA 454
V+GKG F V + + QQ AVK++ +SS +K + + H ++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSA---QGLEYLHYG 511
L+ + +++E+M L + + + + E AV S Q LE L Y
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE----AVASHYMRQILEALRYC 146
Query: 512 CKPPIVHRDVKSSNILLNEK---LQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
I+HRDVK N+LL K K+ DFG++ + S ++ GTP ++ PE
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHFMAPEV 204
Query: 569 YVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ DV+ GV+L +++G P E
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCC-----FQLLQVKLLMRVHHRNLTALIG 457
RV+G+G + +V L ++ A+K++ +Q + + N L+G
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 458 Y--CIEGNN-MGLIYEYMASGTLDQYLKGKK----EHMLNWVERLQIAVDSAQGLEYLHY 510
C + + + + EY+ G L +++ ++ EH + + +A L YLH
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLH- 138
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
+ I++RD+K N+LL+ + K+ D+G+ + + D ++ GTP Y+ PE
Sbjct: 139 --ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGD-TTSXFCGTPNYIAPEILR 194
Query: 571 LNWLNEKSDVYSFGVVLLEIITGRRP--VISRAEDDTTHISQWVNSMLAEGDIR 622
D ++ GV++ E++ GR P ++ +++ + ++ ++ E IR
Sbjct: 195 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 248
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ------LLQVKLLMRVHHRNLTALI 456
+G G G V Y LD N VA+K LS Q ++ L+ V+H+N+ +L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 457 GYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEYLH 509
E ++ L+ E M L Q ++ + +H ER+ + G+++LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKHLH 143
Query: 510 YGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVI 197
Query: 570 VLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 58/297 (19%)
Query: 403 ERVLGKGGFGEV-YHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV-HHRNLTALIGYC- 459
E++LG G G V + GS +ML C L+++KLL H N+ YC
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCS 77
Query: 460 ----------IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+E N+ L + D+ LK +KE+ N + L+ A G+ +LH
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY--NPISLLR---QIASGVAHLH 132
Query: 510 YGCKPPIVHRDVKSSNILLN-------------EKLQAKIADFGL-SRIFSIESSDQIS- 554
I+HRD+K NIL++ E L+ I+DFGL ++ S +SS + +
Sbjct: 133 ---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 555 TAVAGTPGYLDPEYY-------VLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTT 606
+GT G+ PE L D++S G V I++ G+ P D +
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF----GDKYS 245
Query: 607 HISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
S + + + +++ + D SL +A +L H +RPT VL
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIA--------EATDLISQMIDHDPLKRPTAMKVL 294
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCC-----FQLLQVKLLMRVHHRNLTALIG 457
RV+G+G + +V L ++ A+K++ +Q + + N L+G
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 458 Y--CIEGNN-MGLIYEYMASGTLDQYLKGKK----EHMLNWVERLQIAVDSAQGLEYLHY 510
C + + + + EY+ G L +++ ++ EH + + +A L YLH
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLH- 127
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
+ I++RD+K N+LL+ + K+ D+G+ + + D ++ GTP Y+ PE
Sbjct: 128 --ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGD-TTSXFCGTPNYIAPEILR 183
Query: 571 LNWLNEKSDVYSFGVVLLEIITGRRP--VISRAEDDTTHISQWVNSMLAEGDIR 622
D ++ GV++ E++ GR P ++ +++ + ++ ++ E IR
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCC-----FQLLQVKLLMRVHHRNLTALIG 457
RV+G+G + +V L ++ A+K++ +Q + + N L+G
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 458 Y--CIEGNN-MGLIYEYMASGTLDQYLKGKK----EHMLNWVERLQIAVDSAQGLEYLHY 510
C + + + + EY+ G L +++ ++ EH + + +A L YLH
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLH- 123
Query: 511 GCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYV 570
+ I++RD+K N+LL+ + K+ D+G+ + + D ++ GTP Y+ PE
Sbjct: 124 --ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGD-TTSXFCGTPNYIAPEILR 179
Query: 571 LNWLNEKSDVYSFGVVLLEIITGRRP--VISRAEDDTTHISQWVNSMLAEGDIR 622
D ++ GV++ E++ GR P ++ +++ + ++ ++ E IR
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 233
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 406 LGKGGFGEVYHGSLDDNQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALIGYC 459
+G+G +G VY + + A+K + + ++ +L + H N+ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 460 IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ L++E+ LDQ LK + +E + Q L + Y ++HR
Sbjct: 70 HTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 520 DVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKS- 578
D+K N+L+N + + KIADFGL+R F I V T Y P+ VL + S
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPD--VLMGSKKYST 180
Query: 579 --DVYSFGVVLLEIITGRR--PVISRAE 602
D++S G + E++ G P +S A+
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 142
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 196
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 235
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 141
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 195
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 86
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 140
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 141 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 194
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 195 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 233
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 179
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 180 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 233
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 272
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 135
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 189
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 228
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 87
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 141
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 195
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 52/259 (20%)
Query: 392 YSEIQKITNNF--ERVLGKGGFGEVYHGS----LDDNQQVAVKML--SSSCCFQLLQVKL 443
Y + +++N F E +G+G F VY + + +++A+K L +S +++
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 444 LMRVHHRNLTALIGYCIEGNNMGLI-YEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSA 502
L ++ + YC N+ +I Y+ + L L++ E + ++
Sbjct: 73 LTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-----LSFQEVREYMLNLF 127
Query: 503 QGLEYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSR---IFSIE--------- 548
+ L+ +H +G IVHRDVK SN L N +L+ + DFGL++ IE
Sbjct: 128 KALKRIHQFG----IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEA 183
Query: 549 --------------SSDQISTAVAGTPGYLDPEYYVLNWLNEKS---DVYSFGVVLLEII 591
S Q AGTPG+ PE VL ++ D++S GV+ L ++
Sbjct: 184 QQERCSQNKCSICLSRRQQVAPRAGTPGFRAPE--VLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 592 TGRRPVISRAEDDTTHISQ 610
+GR P +A DD T ++Q
Sbjct: 242 SGRYP-FYKASDDLTALAQ 259
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 81
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 135
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 189
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 228
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 406 LGKGGFGEVYHGSLDD--NQQVAVKML------SSSCCFQLLQVKLLMRVHHRNLTALIG 457
LG+G +GEVY ++D N+ VA+K + + +V LL + HRN+ L
Sbjct: 42 LGEGTYGEVYK-AIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 458 YCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH-YGCKPPI 516
+ + LI+EY A L +Y+ + + ++ + G+ + H C
Sbjct: 101 VIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQL--INGVNFCHSRRC---- 153
Query: 517 VHRDVKSSNILL-----NEKLQAKIADFGLSRIFSI 547
+HRD+K N+LL +E KI DFGL+R F I
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 88
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 142
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 196
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 235
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 134
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 188
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 227
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y LD N VA+K LS FQ ++ L+ V+H+N+ +
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ L+ E M L Q ++ + +H ER+ + G+++
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 179
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 180 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 233
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ R ++ D +I QW
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMV--RHKILFPGRD---YIDQW 272
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y L+ N VA+K LS FQ ++ L+ V+H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ ++ E M L Q ++ + +H ER+ + G+++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 141
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYYRAPE 195
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E+I G T HI QW
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQW 234
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y L+ N VA+K LS FQ ++ L+ V+H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ ++ E M L Q ++ + +H ER+ + G+++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 141
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 195
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E+I G T HI QW
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQW 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y L+ N VA+K LS FQ ++ L+ V+H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ ++ E M L Q ++ + +H ER+ + G+++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 141
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 195
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E+I G T HI QW
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQW 234
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 402 FERVLGKGGFGEVYHGSLDD--------NQQVAVKMLS------SSCCFQLLQVKLLMRV 447
F LG+G F +++ G + +V +K+L S F+ ++ ++
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE--AASMMSKL 69
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEY 507
H++L G C G+ L+ E++ G+LD YLK K ++ +N + +L++A A + +
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAWAMHF 128
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQ--------AKIADFGLSRIFSIESSDQISTAVAG 559
L ++H +V + NILL + K++D G+S ++ D + +
Sbjct: 129 LEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS--ITVLPKDILQERIPW 183
Query: 560 TPGYL--DPEYYVLNWLNEKSDVYSFGVVLLEIITG 593
P +P+ LN +D +SFG L EI +G
Sbjct: 184 VPPECIENPKN-----LNLATDKWSFGTTLWEICSG 214
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 120/295 (40%), Gaps = 58/295 (19%)
Query: 403 ERVLGKGGFGEV-YHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV-HHRNLTALIGYC- 459
E++LG G G V + GS +ML C L+++KLL H N+ YC
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCS 95
Query: 460 ----------IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+E N+ L + D+ LK +KE+ N + L+ A G+ +LH
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY--NPISLLR---QIASGVAHLH 150
Query: 510 YGCKPPIVHRDVKSSNILLN-------------EKLQAKIADFGLSRIFSIESSDQISTA 556
I+HRD+K NIL++ E L+ I+DFGL + ++S
Sbjct: 151 ---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRX 205
Query: 557 ----VAGTPGYLDPEYY---VLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHI 608
+GT G+ PE L D++S G V I++ G+ P D +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF----GDKYSRE 261
Query: 609 SQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
S + + + +++ + D SL +A +L H +RPT VL
Sbjct: 262 SNIIRGIFSLDEMKCLHDRSLIA--------EATDLISQMIDHDPLKRPTAMKVL 308
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y L+ N VA+K LS FQ ++ L+ V+H+N+
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 88
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ ++ E M L Q ++ + +H ER+ + G+++
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 142
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 196
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E+I G T HI QW
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQW 235
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 120/295 (40%), Gaps = 58/295 (19%)
Query: 403 ERVLGKGGFGEV-YHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV-HHRNLTALIGYC- 459
E++LG G G V + GS +ML C L+++KLL H N+ YC
Sbjct: 38 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCS 95
Query: 460 ----------IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+E N+ L + D+ LK +KE+ N + L+ A G+ +LH
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY--NPISLLR---QIASGVAHLH 150
Query: 510 YGCKPPIVHRDVKSSNILLN-------------EKLQAKIADFGLSRIFSIESSDQISTA 556
I+HRD+K NIL++ E L+ I+DFGL + ++S
Sbjct: 151 ---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRX 205
Query: 557 ----VAGTPGYLDPEYY---VLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDDTTHI 608
+GT G+ PE L D++S G V I++ G+ P D +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF----GDKYSRE 261
Query: 609 SQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
S + + + +++ + D SL +A +L H +RPT VL
Sbjct: 262 SNIIRGIFSLDEMKCLHDRSLIA--------EATDLISQMIDHDPLKRPTAMKVL 308
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 422 NQQVAVKMLSSSCCFQLLQVKLLMRV-HHRNLTALIGYCIEGNNMGLIYEYMASGTL-DQ 479
N + AVK++ S ++++L+R H N+ L +G + ++ E G L D+
Sbjct: 47 NXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDK 106
Query: 480 YLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKL----QAK 535
L+ K + E + + +EYLH +VHRD+K SNIL ++ +
Sbjct: 107 ILRQK---FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIR 160
Query: 536 IADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRR 595
I DFG ++ + + + + T ++ PE + D++S GV+L +TG
Sbjct: 161 ICDFGFAK--QLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYT 218
Query: 596 PVISRAEDDT 605
P + DDT
Sbjct: 219 P-FANGPDDT 227
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 440 QVKLLMRVHHRNLTALIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVE 493
++ LL V+H+N+ +L+ E ++ L+ E M L Q + + +H E
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDH-----E 126
Query: 494 RLQ-IAVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQ 552
R+ + G+++LH I+HRD+K SNI++ KI DFGL+R ++
Sbjct: 127 RMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNF 180
Query: 553 ISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ T T Y PE + D++S G ++ E++ G VI + D HI QW
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG--CVIFQGTD---HIDQW 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVR 77
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 135
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 180
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVR 77
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 135
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 180
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 406 LGKGGFGEVY---HGSLDDNQQVAVKMLSSSCCFQLL--QVKLLMRVHHRNLTALIGYCI 460
LG G FG V+ + +N M + + +++ + + H L L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 461 EGNNMGLIYEYMASGTLDQYLKGKKEH-MLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ N M +IYE+M+ G L + K EH ++ E ++ +GL ++H VH
Sbjct: 119 DDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHL 173
Query: 520 DVKSSNILLNEKL--QAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
D+K NI+ K + K+ DFGL+ + S +++T GT + PE +
Sbjct: 174 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 230
Query: 578 SDVYSFGVVLLEIITGRRPVISRAEDDT 605
+D++S GV+ +++G P +D+T
Sbjct: 231 TDMWSVGVLSYILLSGLSPFGGENDDET 258
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 406 LGKGGFGEVY---HGSLDDNQQVAVKMLSSSCCFQLL--QVKLLMRVHHRNLTALIGYCI 460
LG G FG V+ + +N M + + +++ + + H L L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 461 EGNNMGLIYEYMASGTLDQYLKGKKEH-MLNWVERLQIAVDSAQGLEYLHYGCKPPIVHR 519
+ N M +IYE+M+ G L + K EH ++ E ++ +GL ++H VH
Sbjct: 225 DDNEMVMIYEFMSGGEL--FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHL 279
Query: 520 DVKSSNILLNEKL--QAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
D+K NI+ K + K+ DFGL+ + S +++T GT + PE +
Sbjct: 280 DLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYY 336
Query: 578 SDVYSFGVVLLEIITGRRPVISRAEDDT 605
+D++S GV+ +++G P +D+T
Sbjct: 337 TDMWSVGVLSYILLSGLSPFGGENDDET 364
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 46 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 105
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 163
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 164 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 208
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 209 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 169
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 170 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 214
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 56 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 115
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 173
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 174 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 218
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 219 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 54 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 113
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 171
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 172 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 216
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 217 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y L+ N VA+K LS FQ ++ L+ V+H+N+
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 89
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ ++ E M L Q ++ + +H ER+ + G+++
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 143
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T Y PE
Sbjct: 144 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYYRAPE 197
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E+I G T HI QW
Sbjct: 198 VILGMGYKENVDIWSVGCIMGEMIKG-----GVLFPGTDHIDQW 236
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 120/299 (40%), Gaps = 62/299 (20%)
Query: 403 ERVLGKGGFGEV-YHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRV-HHRNLTALIGYC- 459
E++LG G G V + GS +ML C L+++KLL H N+ YC
Sbjct: 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCS 77
Query: 460 ----------IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLH 509
+E N+ L + D+ LK +KE+ N + L+ A G+ +LH
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY--NPISLLR---QIASGVAHLH 132
Query: 510 YGCKPPIVHRDVKSSNILLN-------------EKLQAKIADFGLSRIFSIESSDQISTA 556
I+HRD+K NIL++ E L+ I+DFGL + ++S
Sbjct: 133 ---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK--KLDSGQXXFRX 187
Query: 557 ----VAGTPGYLDPEYY-------VLNWLNEKSDVYSFGVVLLEIIT-GRRPVISRAEDD 604
+GT G+ PE L D++S G V I++ G+ P D
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF----GDK 243
Query: 605 TTHISQWVNSMLAEGDIRNIVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVL 663
+ S + + + +++ + D SL +A +L H +RPT VL
Sbjct: 244 YSRESNIIRGIFSLDEMKCLHDRSLIA--------EATDLISQMIDHDPLKRPTAMKVL 294
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 23 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 82
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 140
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 141 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 185
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 186 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 404 RVLGKGGFGEVYHGSLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
+V+G G FG V+ L ++ +VA+K + F+ +++++ V H N+ L +
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNG 105
Query: 464 N------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
+ + L+ EY+ Y K K+ + L I + Q L L Y
Sbjct: 106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQT-----MPMLLIKLYMYQLLRSLAYIHSI 160
Query: 515 PIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGYLDPE--YYVL 571
I HRD+K N+LL+ K+ DFG ++I I +S + Y PE +
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSXICSRY--YRAPELIFGAT 217
Query: 572 NWLNEKSDVYSFGVVLLEIITGR 594
N+ D++S G V+ E++ G+
Sbjct: 218 NY-TTNIDIWSTGCVMAELMQGQ 239
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 31 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 90
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 148
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 149 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 193
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 194 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 392 YSEIQKITNNFERVLGKGGFGEVYHG-SLDDNQQVAVKML----------SSSCCFQLLQ 440
Y +++KI G+G +G V+ + + ++ VA+K + SS+ L +
Sbjct: 4 YEKLEKI--------GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA----LRE 51
Query: 441 VKLLMRVHHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVD 500
+ LL + H+N+ L + L++E+ DQ LK + ++ +
Sbjct: 52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-----DQDLKKYFDSCNGDLDPEIVKSF 106
Query: 501 SAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGT 560
Q L+ L + ++HRD+K N+L+N + K+ADFGL+R F I + +A T
Sbjct: 107 LFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV--RCYSAEVVT 164
Query: 561 PGYLDPEYYVLNWLNEKS-DVYSFGVVLLEIITGRRPVI 598
Y P+ L S D++S G + E+ RP+
Sbjct: 165 LWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLF 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 156
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 214
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 215 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 259
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 260 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 38/220 (17%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 135
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTP-- 561
Y+H +G I HRD+K N+LL+ K+ DFG S+ Q+ V G P
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFG--------SAKQL---VRGEPNV 180
Query: 562 GYLDPEYYVLNWL-------NEKSDVYSFGVVLLEIITGR 594
Y+ YY L DV+S G VL E++ G+
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVR 77
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ + Y + K+ + +V+ + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 135
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 188
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
+I E M G L ++ + + E +I D +++LH I HRDVK N+
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENL 140
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSF 583
L K + K+ DFG F+ E++ TP Y+ PE ++ D++S
Sbjct: 141 LYTSKEKDAVLKLTDFG----FAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 196
Query: 584 GVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 197 GVIMYILLCGFPPFYS 212
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
+I E M G L ++ + + E +I D +++LH I HRDVK N+
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENL 159
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSF 583
L K + K+ DFG F+ E++ TP Y+ PE ++ D++S
Sbjct: 160 LYTSKEKDAVLKLTDFG----FAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 215
Query: 584 GVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 216 GVIMYILLCGFPPFYS 231
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 34/227 (14%)
Query: 395 IQKITNNFE--RVLGKGGFGEVYHGSLDDNQQ-VAVKMLSSS-----CCFQLLQVKLLMR 446
+ I+++F+ +LG+G +G V + + VA+K + L ++K+L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 447 VHHRNLTALIGY----CIEGNNMGLIYEYMASGTLDQYLKGK---KEHMLNWVERLQIAV 499
H N+ + E N I + + L + + + +H+ ++ + AV
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS----- 554
G ++HRD+K SN+L+N K+ DFGL+RI ++D
Sbjct: 126 KVLHGSN---------VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 555 ---TAVAGTPGYLDPEYYVLNWLNEKS-DVYSFGVVLLEIITGRRPV 597
T T Y PE + + ++ DV+S G +L E+ RRP+
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 502 AQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTP 561
A+G+E+L +HRD+ + NILL+E KI DFGL+R ++ D + P
Sbjct: 209 ARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDI-YKNPDYVRKGDTRLP 264
Query: 562 -GYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
++ PE + KSDV+S+GV+L EI +
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 34/228 (14%)
Query: 395 IQKITNNFE--RVLGKGGFGEVYHGSLDDNQQ-VAVKMLSSS-----CCFQLLQVKLLMR 446
+ I+++F+ +LG+G +G V + + VA+K + L ++K+L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 447 VHHRNLTALIGY----CIEGNNMGLIYEYMASGTLDQYLKGK---KEHMLNWVERLQIAV 499
H N+ + E N I + + L + + + +H+ ++ + AV
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQIS----- 554
G ++HRD+K SN+L+N K+ DFGL+RI ++D
Sbjct: 126 KVLHGSN---------VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 555 ---TAVAGTPGYLDPEYYVLNWLNEKS-DVYSFGVVLLEIITGRRPVI 598
T T Y PE + + ++ DV+S G +L E+ RRP+
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIF 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 31/215 (14%)
Query: 405 VLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCF-----QLLQVKLLMRVHHRNLTALIGY 458
+LG+G V+ G + A+K+ ++ Q+ + ++L +++H+N+ L +
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--F 73
Query: 459 CIEGNNMG----LIYEYMASGTLDQYLKG-KKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
IE LI E+ G+L L+ + L E L + D G+ +L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 514 PPIVHRDVKSSNIL--LNEKLQA--KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
IVHR++K NI+ + E Q+ K+ DFG +R +E +Q ++ GT YL P+ Y
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR--ELEDDEQF-VSLYGTEEYLHPDMY 187
Query: 570 ---VLNWLNEKS-----DVYSFGVVLLEIITGRRP 596
VL ++K D++S GV TG P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 34/227 (14%)
Query: 395 IQKITNNFE--RVLGKGGFGEVYHGSLDDNQQ-VAVKMLSSS-----CCFQLLQVKLLMR 446
+ I+++F+ +LG+G +G V + + VA+K + L ++K+L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 447 VHHRNLTALIGY----CIEGNNMGLIYEYMASGTLDQYLKGK---KEHMLNWVERLQIAV 499
H N+ + E N I + + L + + + +H+ ++ + AV
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 500 DSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSD------QI 553
G ++HRD+K SN+L+N K+ DFGL+RI ++D Q
Sbjct: 126 KVLHGSN---------VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 554 STAV--AGTPGYLDPEYYVLNWLNEKS-DVYSFGVVLLEIITGRRPV 597
S V T Y PE + + ++ DV+S G +L E+ RRP+
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 32/223 (14%)
Query: 394 EIQKITNNFERVLGKGGFGEVYHGS-LDDNQQVAVKMLSSSCCFQ---LLQVKLLMR--V 447
E+ ++ RVL +GGF VY + ++ A+K L S+ + ++Q M+
Sbjct: 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS 83
Query: 448 HHRNLT-----ALIGYCIEGNNMG----LIYEYMASGTLDQYLKGKKEHM-LNWVERLQI 497
H N+ A IG E ++ G L+ + G L ++LK + L+ L+I
Sbjct: 84 GHPNIVQFCSAASIGK--EESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKI 141
Query: 498 AVDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFS----IESSDQI 553
+ + ++++H KPPI+HRD+K N+LL+ + K+ DFG + S S Q
Sbjct: 142 FYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 554 STAVA------GTPGYLDPEYYVL--NW-LNEKSDVYSFGVVL 587
V TP Y PE L N+ + EK D+++ G +L
Sbjct: 201 RALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 169
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 170 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 222
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 31/215 (14%)
Query: 405 VLGKGGFGEVYHGSLDDNQQV-AVKMLSSSCCF-----QLLQVKLLMRVHHRNLTALIGY 458
+LG+G V+ G + A+K+ ++ Q+ + ++L +++H+N+ L +
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL--F 73
Query: 459 CIEGNNMG----LIYEYMASGTLDQYLKG-KKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
IE LI E+ G+L L+ + L E L + D G+ +L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 514 PPIVHRDVKSSNIL--LNEKLQA--KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYY 569
IVHR++K NI+ + E Q+ K+ DFG +R +E +Q + GT YL P+ Y
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR--ELEDDEQF-VXLYGTEEYLHPDMY 187
Query: 570 ---VLNWLNEKS-----DVYSFGVVLLEIITGRRP 596
VL ++K D++S GV TG P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 26 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 85
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 143
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 144 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 196
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 37 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 96
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 154
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 155 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 207
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 89
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 147
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 148 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 200
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 89
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 147
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 148 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 200
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 397 KITNNFE--RVLGKGGFGEVYHGS-LDDNQQVAVKMLSSSCCF-QLLQVKLLMRVHH--R 450
++ N F R +G G FGE+Y G+ + N++VA+K+ + QLL + R+
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGT 63
Query: 451 NLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHY 510
+ + + +EG+ L+ + + D + ++ L V L +A +E++H
Sbjct: 64 GIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTV--LMLADQMINRVEFVHS 121
Query: 511 GCKPPIVHRDVKSSNILLN---EKLQAKIADFGLSRIFSIESSDQI-----STAVAGTPG 562
+HRD+K N L+ Q I DFGL++ + S+ Q + + GT
Sbjct: 122 KS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR 178
Query: 563 YLDPEYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
Y ++ + + D+ S G VL+ + G P
Sbjct: 179 YASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 19 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 78
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 136
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 137 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 189
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 135
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 188
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 449 HRNLTALIGYCIE----GNNMGLIYEYMASGTLDQYLKGKKE--HMLNWVERLQIAVDSA 502
H N+ L+ YC+ + L+ + GTL ++ K+ + L + L + +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGL--SRIFSIESSDQIST----- 555
+GLE +H HRD+K +NILL ++ Q + D G +E S Q T
Sbjct: 145 RGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWA 201
Query: 556 AVAGTPGYLDPEYYVLN---WLNEKSDVYSFGVVLLEIITGRRP 596
A T Y PE + + ++E++DV+S G VL ++ G P
Sbjct: 202 AQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 135
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 188
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 135
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 136 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 188
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 449 HRNLTALIGYC--IEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLE 506
H N+ ++G C + LI +M G+L L +++ + ++ A+D A+G+
Sbjct: 66 HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA 125
Query: 507 YLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDP 566
+LH +P I + S +++++E + A+I+ + FS +S ++ P L
Sbjct: 126 FLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVK--FSFQSPGRMYAPAWVAPEALQK 182
Query: 567 EYYVLNWLNEKSDVYSFGVVLLEIITGRRP 596
+ N +D++SF V+L E++T P
Sbjct: 183 KPEDTN--RRSADMWSFAVLLWELVTREVP 210
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 396 QKITNNFERVLGKGGFGEVYHGSL-DDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
Q+++ +V+G G FG VY L D + VA+K + F+ +++++ ++ H N+
Sbjct: 22 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 81
Query: 455 LIGYCIEGNN------MGLIYEYMASGTL---DQYLKGKKEHMLNWVERLQIAVDSAQGL 505
L + + L+ +Y+ Y + K+ + +V+ + + L
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSL 139
Query: 506 EYLH-YGCKPPIVHRDVKSSNILLNEKLQA-KIADFGLSRIFSIESSDQISTAVAGTPGY 563
Y+H +G I HRD+K N+LL+ K+ DFG ++ + +S + Y
Sbjct: 140 AYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRY--Y 192
Query: 564 LDPEY-YVLNWLNEKSDVYSFGVVLLEIITGR 594
PE + DV+S G VL E++ G+
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKML----------SSSCCFQLLQVKLLMRVHHRNLTA 454
+G+G +G V+ + + ++ VA+K + SS+ L ++ LL + H+N+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA----LREICLLKELKHKNIVR 65
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKP 514
L + L++E+ DQ LK + ++ + Q L+ L +
Sbjct: 66 LHDVLHSDKKLTLVFEFC-----DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 515 PIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWL 574
++HRD+K N+L+N + K+A+FGL+R F I + +A T Y P+ L
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKL 178
Query: 575 NEKS-DVYSFGVVLLEIITGRRPVI 598
S D++S G + E+ RP+
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLF 203
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 518 HRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEK 577
HRDVK NIL++ A + DFG++ + E Q+ V GT Y PE + + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 578 SDVYSFGVVLLEIITGRRP 596
+D+Y+ VL E +TG P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 248 LTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSLPADLVER 307
L G I P A LT + +L +++ ++SG P+FLS++ +L L+ N L+G+LP +
Sbjct: 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL 148
Query: 308 SNNGSLTLSVDGN 320
N + ++ DGN
Sbjct: 149 PN--LVGITFDGN 159
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSL 300
L ++ + ++G I + + + + LD S N+LSGT P +S LP+L + N+++G++
Sbjct: 106 LYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165
Query: 301 P 301
P
Sbjct: 166 P 166
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 265 LDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSLP 301
LDL NN + GT P+ L++L L +LN+ N L G +P
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 238 IISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSL-RALNLKRNKL 296
+++L+ S + L+G + P ++L + + N +SG P+ L ++ + RN+L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 297 TGSLP 301
TG +P
Sbjct: 187 TGKIP 191
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 240 SLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGS 299
S+ +S + LTG+I P FANL + F+DLS N L G + + ++L +N L
Sbjct: 178 SMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236
Query: 300 LPADLVERSNNG 311
L + ++ NG
Sbjct: 237 LGKVGLSKNLNG 248
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 56/282 (19%)
Query: 405 VLGKGGFGEVYHGS-LDDNQQVAVKML-------------SSSCCFQLLQVKLLMRVH-- 448
+LGKGGFG V+ G L D QVA+K++ S +C L+V LL +V
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTC---PLEVALLWKVGAG 94
Query: 449 --HRNLTALIGYCIEGNNMGLIYEY-MASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGL 505
H + L+ + L+ E + + L Y+ +K + R +
Sbjct: 95 GGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT-EKGPLGEGPSRCFFG-QVVAAI 152
Query: 506 EYLHYGCKPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYL 564
++ H +VHRD+K NIL++ + AK+ DFG + D+ T GT Y
Sbjct: 153 QHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL----HDEPYTDFDGTRVYS 205
Query: 565 DPEYYVLNWLNE-KSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQWVNSMLAEGDIRN 623
PE+ + + + V+S G++L +++ G P E D +
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPF----ERD-----------------QE 244
Query: 624 IVDPSLQGNFDNNSAWKAVELALACASHTSSERPTMTDVLME 665
I++ L +F + + L C + S RP++ ++L++
Sbjct: 245 ILEAEL--HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y L+ N VA+K LS FQ ++ L+ V+H+N+
Sbjct: 26 IGSGAQGIVCAAYDAILERN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 81
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ ++ E M L Q ++ + +H ER+ + G+++
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 135
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 189
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ + ++ D +I QW
Sbjct: 190 VILGMGYKENVDLWSVGCIMGEMVCHK--ILFPGRD---YIDQW 228
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 21/211 (9%)
Query: 406 LGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQ------------LLQVKLLMRVHHRNL 452
LG G FG V+ + N++V VK + + L++ +L RV H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 453 TALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
++ L+ E SG LD + + L+ I + YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL-- 148
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLN 572
I+HRD+K NI++ E K+ DFG + ++ GT Y PE + N
Sbjct: 149 -KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTIEYCAPEVLMGN 204
Query: 573 -WLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ + +++S GV L ++ P E
Sbjct: 205 PYRGPELEMWSLGVTLYTLVFEENPFCELEE 235
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y L+ N VA+K LS FQ ++ L+ V+H+N+
Sbjct: 37 IGSGAQGIVCAAYDAILERN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 92
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ ++ E M L Q ++ + +H ER+ + G+++
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 146
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + + T T Y PE
Sbjct: 147 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 200
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ + ++ D +I QW
Sbjct: 201 VILGMGYKENVDLWSVGCIMGEMVCHK--ILFPGRD---YIDQW 239
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 248 LTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSLPADL 304
LTGEI +N T + ++ LSNN L+G P+++ +L +L L L N +G++PA+L
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 242 NLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSLP 301
N++S G SP F N ++ FLD+S N LSG P+ + +P L LNL N ++GS+P
Sbjct: 611 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Query: 302 ADL 304
++
Sbjct: 671 DEV 673
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 234 NPSRIIS-LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLK 292
NP + L L ++G TG+I P +N + + L LS N LSGT P L L LR L L
Sbjct: 388 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 447
Query: 293 RNKLTGSLPADLV 305
N L G +P +L+
Sbjct: 448 LNMLEGEIPQELM 460
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSL 300
++LS++ LTGEI + L + L LSNNS SG P L SL L+L N G++
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 301 PADLVERS 308
PA + ++S
Sbjct: 552 PAAMFKQS 559
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSL 300
LNL + ++G I +L + LDLS+N L G P+ +S L L ++L N L+G +
Sbjct: 658 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 717
Query: 301 P 301
P
Sbjct: 718 P 718
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSL 300
L++SS+ + I P+ + +A++ LD+S N LSG F +S L+ LN+ N+ G +
Sbjct: 202 LDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 260
Query: 301 P 301
P
Sbjct: 261 P 261
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 214 DPCVPKNYWWDGLNCSYEDNNPSRIISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLS 273
+PC + + G DNN S + L++S + L+G I ++ + L+L +N +S
Sbjct: 608 NPCNITSRVYGGHTSPTFDNNGSMMF-LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDIS 666
Query: 274 GTFPEFLSKLPSLRALNLKRNKLTGSLP 301
G+ P+ + L L L+L NKL G +P
Sbjct: 667 GSIPDEVGDLRGLNILDLSSNKLDGRIP 694
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 234 NPSRIISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKR 293
N S ++SL+LS + L+G I +L+ + L L N L G P+ L + +L L L
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 472
Query: 294 NKLTGSLPADLVERSNNGSLTLS 316
N LTG +P+ L +N ++LS
Sbjct: 473 NDLTGEIPSGLSNCTNLNWISLS 495
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 236 SRIISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNK 295
S + L++S + L+G+ S + T ++ L++S+N G P L SL+ L+L NK
Sbjct: 220 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENK 277
Query: 296 LTGSLPADLVERSNNGSLTLSVDGN 320
TG +P D + + + L + GN
Sbjct: 278 FTGEIP-DFLSGACDTLTGLDLSGN 301
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 236 SRIISLNLSSSGLTGEISPYFAN--LTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKR 293
+ +++L+LSS+ +G I P ++ L L NN +G P LS L +L+L
Sbjct: 365 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 424
Query: 294 NKLTGSLPADL 304
N L+G++P+ L
Sbjct: 425 NYLSGTIPSSL 435
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEF--LSKLPSLRALN 290
L+LSS+ L G I + LT + +DLSNN+LSG PE P + LN
Sbjct: 682 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLN 733
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 238 IISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFP-EFLSKLPSLRALNLKRNKL 296
+ L+LS + G + P+F + + +E L LS+N+ SG P + L K+ L+ L+L N+
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 297 TGSLPADLVERS 308
+G LP L S
Sbjct: 353 SGELPESLTNLS 364
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 236 SRIISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNK 295
S++ L L + L GEI + +E L L N L+G P LS +L ++L N+
Sbjct: 439 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 498
Query: 296 LTGSLP 301
LTG +P
Sbjct: 499 LTGEIP 504
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTG 298
L +S + ++G++ + +EFLD+S+N+ S P FL +L+ L++ NKL+G
Sbjct: 180 LAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSG 234
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 398 ITNNFERV--LGKGGFGEVYH-GSLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTA 454
+F+R+ LG G +GEV+ S +D + AVK S + + L V
Sbjct: 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 455 LIGYCIEGNNM----GLIYEYMASGTLDQYLKGK--KEHMLNWVERLQIAV------DSA 502
C+ G++Y L L G ++H W L A D+
Sbjct: 115 QHPCCVRLEQAWEEGGILY-------LQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTL 167
Query: 503 QGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPG 562
L +LH +VH DVK +NI L + + K+ DFGL + ++ G P
Sbjct: 168 LALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPR 221
Query: 563 YLDPEYYVLNWLNEKSDVYSFGVVLLEI 590
Y+ PE ++ +DV+S G+ +LE+
Sbjct: 222 YMAPELLQGSY-GTAADVFSLGLTILEV 248
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 248 LTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSLPADL 304
LTGEI +N T + ++ LSNN L+G P+++ +L +L L L N +G++PA+L
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 242 NLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSLP 301
N++S G SP F N ++ FLD+S N LSG P+ + +P L LNL N ++GS+P
Sbjct: 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Query: 302 ADL 304
++
Sbjct: 674 DEV 676
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 234 NPSRIIS-LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLK 292
NP + L L ++G TG+I P +N + + L LS N LSGT P L L LR L L
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 293 RNKLTGSLPADLV 305
N L G +P +L+
Sbjct: 451 LNMLEGEIPQELM 463
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSL 300
++LS++ LTGEI + L + L LSNNS SG P L SL L+L N G++
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 301 PADLVERS 308
PA + ++S
Sbjct: 555 PAAMFKQS 562
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSL 300
LNL + ++G I +L + LDLS+N L G P+ +S L L ++L N L+G +
Sbjct: 661 LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720
Query: 301 P 301
P
Sbjct: 721 P 721
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTGSL 300
L++SS+ + I P+ + +A++ LD+S N LSG F +S L+ LN+ N+ G +
Sbjct: 205 LDVSSNNFSTGI-PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263
Query: 301 P 301
P
Sbjct: 264 P 264
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 214 DPCVPKNYWWDGLNCSYEDNNPSRIISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLS 273
+PC + + G DNN S + L++S + L+G I ++ + L+L +N +S
Sbjct: 611 NPCNITSRVYGGHTSPTFDNNGSMMF-LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDIS 669
Query: 274 GTFPEFLSKLPSLRALNLKRNKLTGSLP 301
G+ P+ + L L L+L NKL G +P
Sbjct: 670 GSIPDEVGDLRGLNILDLSSNKLDGRIP 697
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 234 NPSRIISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKR 293
N S ++SL+LS + L+G I +L+ + L L N L G P+ L + +L L L
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475
Query: 294 NKLTGSLPADLVERSNNGSLTLS 316
N LTG +P+ L +N ++LS
Sbjct: 476 NDLTGEIPSGLSNCTNLNWISLS 498
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 236 SRIISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNK 295
S + L++S + L+G+ S + T ++ L++S+N G P L SL+ L+L NK
Sbjct: 223 SALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENK 280
Query: 296 LTGSLPADLVERSNNGSLTLSVDGN 320
TG +P D + + + L + GN
Sbjct: 281 FTGEIP-DFLSGACDTLTGLDLSGN 304
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 236 SRIISLNLSSSGLTGEISPYFAN--LTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKR 293
+ +++L+LSS+ +G I P ++ L L NN +G P LS L +L+L
Sbjct: 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427
Query: 294 NKLTGSLPADL 304
N L+G++P+ L
Sbjct: 428 NYLSGTIPSSL 438
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEF--LSKLPSLRALN 290
L+LSS+ L G I + LT + +DLSNN+LSG PE P + LN
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLN 736
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 238 IISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFP-EFLSKLPSLRALNLKRNKL 296
+ L+LS + G + P+F + + +E L LS+N+ SG P + L K+ L+ L+L N+
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 297 TGSLPADLVERS 308
+G LP L S
Sbjct: 356 SGELPESLTNLS 367
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 236 SRIISLNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNK 295
S++ L L + L GEI + +E L L N L+G P LS +L ++L N+
Sbjct: 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501
Query: 296 LTGSLP 301
LTG +P
Sbjct: 502 LTGEIP 507
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 241 LNLSSSGLTGEISPYFANLTAIEFLDLSNNSLSGTFPEFLSKLPSLRALNLKRNKLTG 298
L +S + ++G++ + +EFLD+S+N+ S P FL +L+ L++ NKL+G
Sbjct: 183 LAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSG 237
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 397 KITNNFE--RVLGKGGFGEVYHG-SLDDNQQVAVKMLSS------SCCFQLLQVKLLMRV 447
K+ +N+E ++G+G +G VY + N+ VA+K ++ C L ++ +L R+
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 448 HHRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKG--KKEHMLNWVERLQIAVDSAQGL 505
+ L I + + Y+ D LK K L I + G
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSR 543
+++H + I+HRD+K +N LLN+ KI DFGL+R
Sbjct: 145 KFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 162
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 163 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 218
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 219 LGVIMYILLCGYPPFYS 235
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y L+ N VA+K LS FQ ++ L+ V+H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ ++ E M L Q ++ + +H ER+ + G+++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 141
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + +S + V T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVV-TRYYRAPE 195
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ + ++ D +I QW
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVCHK--ILFPGRD---YIDQW 234
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 96 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 152
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 153 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 208
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 209 LGVIMYILLCGYPPFYS 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 91 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 147
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 148 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 203
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 204 LGVIMYILLCGYPPFYS 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 146
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 147 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 203 LGVIMYILLCGYPPFYS 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 98 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 154
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 155 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 210
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 211 LGVIMYILLCGYPPFYS 227
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 97 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 153
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 154 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 209
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 210 LGVIMYILLCGYPPFYS 226
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV---DSAQGL 505
H N+ I N + ++ +MA G+ + H ++ + L IA + L
Sbjct: 69 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC---THFMDGMNELAIAYILQGVLKAL 125
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-- 563
+Y+H+ VHR VK+S+IL++ + K+ GL S+ S Q V P Y
Sbjct: 126 DYIHHMG---YVHRSVKASHILIS--VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 180
Query: 564 -----LDPEYYV--LNWLNEKSDVYSFGVVLLEIITGRRP 596
L PE L + KSD+YS G+ E+ G P
Sbjct: 181 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKML-----SSSCCFQLLQVK----LLMRVHHRNLTA 454
V+GKG F V + + QQ AVK++ +SS +K + + H ++
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSA---QGLEYLHYG 511
L+ + +++E+M L + + + + E AV S Q LE L Y
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE----AVASHYMRQILEALRYC 148
Query: 512 CKPPIVHRDVKSSNILLNEK---LQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
I+HRDVK +LL K K+ FG++ + S ++ GTP ++ PE
Sbjct: 149 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHFMAPEV 206
Query: 569 YVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ DV+ GV+L +++G P E
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 22/214 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKML-----SSSCCFQLLQVK----LLMRVHHRNLTA 454
V+GKG F V + + QQ AVK++ +SS +K + + H ++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSA---QGLEYLHYG 511
L+ + +++E+M L + + + + E AV S Q LE L Y
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE----AVASHYMRQILEALRYC 146
Query: 512 CKPPIVHRDVKSSNILLNEK---LQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEY 568
I+HRDVK +LL K K+ FG++ + S ++ GTP ++ PE
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHFMAPEV 204
Query: 569 YVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAE 602
+ DV+ GV+L +++G P E
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 192
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 193 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 248
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 249 LGVIMYILLCGYPPFYS 265
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 148
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 149 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 205 LGVIMYILLCGYPPFYS 221
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 449 HRNLTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAV---DSAQGL 505
H N+ I N + ++ +MA G+ + H ++ + L IA + L
Sbjct: 85 HPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC---THFMDGMNELAIAYILQGVLKAL 141
Query: 506 EYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGY-- 563
+Y+H+ VHR VK+S+IL++ + K+ GL S+ S Q V P Y
Sbjct: 142 DYIHHMG---YVHRSVKASHILIS--VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 196
Query: 564 -----LDPEYYV--LNWLNEKSDVYSFGVVLLEIITGRRP 596
L PE L + KSD+YS G+ E+ G P
Sbjct: 197 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 198
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 199 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 254
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 255 LGVIMYILLCGYPPFYS 271
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 148
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 149 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 204
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 205 LGVIMYILLCGYPPFYS 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENL 146
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D++S
Sbjct: 147 LYTSKRPNAILKLTDFG----FAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWS 202
Query: 583 FGVVLLEIITGRRPVIS 599
GV++ ++ G P S
Sbjct: 203 LGVIMYILLCGYPPFYS 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 406 LGKGGFGEV---YHGSLDDNQQVAVKMLSSSCCFQ--------LLQVKLLMRVHHRNLTA 454
+G G G V Y L+ N VA+K LS FQ ++ L+ V+H+N+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRP--FQNQTHAKRAYRELVLMKCVNHKNIIG 87
Query: 455 LIGYCI------EGNNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQ-IAVDSAQGLEY 507
L+ E ++ ++ E M L Q ++ + +H ER+ + G+++
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDH-----ERMSYLLYQMLCGIKH 141
Query: 508 LHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPE 567
LH I+HRD+K SNI++ KI DFGL+R + +S + V T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVV-TRYYRAPE 195
Query: 568 YYVLNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTTHISQW 611
+ E D++S G ++ E++ + ++ D +I QW
Sbjct: 196 VILGMGYKENVDLWSVGCIMGEMVCHK--ILFPGRD---YIDQW 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 35/213 (16%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQL----------LQVKLLMRVH--HRN 451
+LG GGFG VY G + DN VA+K + ++V LL +V
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 452 LTALIGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLNWV-ERLQIAVDSA-----QGL 505
+ L+ + ++ LI E M + + +++ ER + + A Q L
Sbjct: 75 VIRLLDWFERPDSFVLILERMEP----------VQDLFDFITERGALQEELARSFFWQVL 124
Query: 506 EYLHYGCKPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYL 564
E + + ++HRD+K NIL++ + + K+ DFG + D + T GT Y
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYS 180
Query: 565 DPEYYVLNWLNEKS-DVYSFGVVLLEIITGRRP 596
PE+ + + +S V+S G++L +++ G P
Sbjct: 181 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 20/132 (15%)
Query: 467 LIYEYMASGTL---DQY--LKGKKEHMLNWVERLQIAVDSA-QGLEYLHYGCKPPIVHRD 520
+IYEYM + ++ D+Y + K ++ ++ + S Y+H + I HRD
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRD 177
Query: 521 VKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVAGTPG---YLDPEYYV--LNWLN 575
VK SNIL+++ + K++DFG ES + + G+ G ++ PE++ ++
Sbjct: 178 VKPSNILMDKNGRVKLSDFG-------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNG 230
Query: 576 EKSDVYSFGVVL 587
K D++S G+ L
Sbjct: 231 AKVDIWSLGICL 242
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 403 ERVLGKGGFGEVYHGSLDDN--QQVAVKMLSS------SCCFQLLQVKLLMRVHHRNLTA 454
+ ++G+G +G VY + D N + VA+K ++ C L ++ +L R+ +
Sbjct: 31 KHLIGRGSYGYVY-LAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIR 89
Query: 455 LIGYCIEGNNMGLIYEYMASGTLDQYLKG--KKEHMLNWVERLQIAVDSAQGLEYLHYGC 512
L I + + Y+ D LK K L I + G ++H
Sbjct: 90 LYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG 149
Query: 513 KPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQI 553
I+HRD+K +N LLN+ K+ DFGL+R + E I
Sbjct: 150 ---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNI 187
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 467 LIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNI 526
++ E + G L ++ + + E +I + ++YLH I HRDVK N+
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH---SINIAHRDVKPENL 192
Query: 527 LLNEKLQ---AKIADFGLSRIFSIESSDQIS-TAVAGTPGYLDPEYYVLNWLNEKSDVYS 582
L K K+ DFG F+ E++ S T TP Y+ PE ++ D +S
Sbjct: 193 LYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWS 248
Query: 583 FGVVLLEIITGRRPVIS 599
GV+ ++ G P S
Sbjct: 249 LGVIXYILLCGYPPFYS 265
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 102/241 (42%), Gaps = 38/241 (15%)
Query: 379 RNDSFAPKSRQFAYSEIQKITNNFERVLGKGGFGEVYHGS-LDDNQQVAVKMLSSSCCFQ 437
R F P + Y + + I R LG G F V+ + +N VA+K++ +
Sbjct: 3 RPGGFHPAFKGEPYKDARYI---LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT 59
Query: 438 LL---QVKLLMRVHHRN------------LTALIGYCIEGNN---MGLIYEYMASGTLDQ 479
++KLL RV+ + L L + +G N + +++E + L
Sbjct: 60 EAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL-- 117
Query: 480 YLKGKKEHM-LNWVERLQIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILL------NEKL 532
L K EH + + QI+ GL+Y+H C I+H D+K N+L+ +
Sbjct: 118 ALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLI 175
Query: 533 QAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVLNWLNEKSDVYSFGVVLLEIIT 592
Q KIAD G + + ++ I T Y PE + +D++S ++ E+IT
Sbjct: 176 QIKIADLGNACWYDEHYTNSIQTR-----EYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
Query: 593 G 593
G
Sbjct: 231 G 231
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL---QVKLL--MRVHHRNLTALIG 457
+V+GKG FG+V +Q VA+KM+ + F ++++L +R ++ T +
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 458 YCIEG----NNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
+ +E N++ + +E + S L + +K K + + A Q L+ LH K
Sbjct: 163 HMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---K 218
Query: 514 PPIVHRDVKSSNILLNEKLQA--KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
I+H D+K NILL ++ ++ K+ DFG S ++ T + + Y PE +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYTXIQ-SRFYRAPEVILG 273
Query: 572 NWLNEKSDVYSFGVVLLEIITG 593
D++S G +L E++TG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 403 ERVLGKGGFGEVYHGSLDDNQQVAVK-------------MLSSS--CCFQLLQVKLLMRV 447
+R + G +G V G + VA+K +LS S C L +++LL
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 448 HHRNLTALIGYCIE-----GNNMGLIYEYM----ASGTLDQYLKGKKEHMLNWVERLQIA 498
HH N+ L + + + L+ E M A DQ + +H+ ++ + +
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILL- 145
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
GL LH + +VHRD+ NILL + I DF L+R +++D T
Sbjct: 146 -----GLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYV 194
Query: 559 GTPGYLDPEYYV-LNWLNEKSDVYSFGVVLLEII 591
Y PE + + D++S G V+ E+
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 404 RVLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLL---QVKLL--MRVHHRNLTALIG 457
+V+GKG FG+V +Q VA+KM+ + F ++++L +R ++ T +
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 458 YCIEG----NNMGLIYEYMASGTLDQYLKGKKEHMLNWVERLQIAVDSAQGLEYLHYGCK 513
+ +E N++ + +E + S L + +K K + + A Q L+ LH K
Sbjct: 163 HMLENFTFRNHICMTFE-LLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---K 218
Query: 514 PPIVHRDVKSSNILLNEKLQA--KIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
I+H D+K NILL ++ ++ K+ DFG S ++ T + + Y PE +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYTXIQ-SRFYRAPEVILG 273
Query: 572 NWLNEKSDVYSFGVVLLEIITG 593
D++S G +L E++TG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 403 ERVLGKGGFGEVYHGSLDDNQQVAVK-------------MLSSS--CCFQLLQVKLLMRV 447
+R + G +G V G + VA+K +LS S C L +++LL
Sbjct: 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF 86
Query: 448 HHRNLTALIGYCIE-----GNNMGLIYEYM----ASGTLDQYLKGKKEHMLNWVERLQIA 498
HH N+ L + + + L+ E M A DQ + +H+ ++ + +
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILL- 145
Query: 499 VDSAQGLEYLHYGCKPPIVHRDVKSSNILLNEKLQAKIADFGLSRIFSIESSDQISTAVA 558
GL LH + +VHRD+ NILL + I DF L+R +++D T
Sbjct: 146 -----GLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYV 194
Query: 559 GTPGYLDPEYYV-LNWLNEKSDVYSFGVVLLEII 591
Y PE + + D++S G V+ E+
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 393 SEIQKITNNFER---VLGKGGFGEVYHGSLDDN--------QQVAVKMLSSSCCFQLLQV 441
SE +++ + FE +G+G +G VY D +Q+ +S S C ++
Sbjct: 13 SERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC---REI 69
Query: 442 KLLMRVHHRNLTAL--IGYCIEGNNMGLIYEYMASGTLDQYLKGKKEHMLN----WVERL 495
LL + H N+ +L + + L+++Y A L +K + N + R
Sbjct: 70 ALLRELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 496 QIAVDSAQGLEYLHYGCKPPIVHRDVKSSNILL----NEKLQAKIADFGLSRIFS--IES 549
+ Q L+ +HY ++HRD+K +NIL+ E+ + KIAD G +R+F+ ++
Sbjct: 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 188
Query: 550 SDQISTAVAGTPGYLDPEYYV-LNWLNEKSDVYSFGVVLLEIITGRRPVISRAEDDTT 606
+ V T Y PE + + D+++ G + E++T R ED T
Sbjct: 189 LADLDPVVV-TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT 245
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
+LG GGFG VY G + DN VA+K + ++ RV + ++ +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV---PMEVVLLKKVSSG 86
Query: 464 NMGLI-----YEYMASGTLDQYLKGKKEHMLNWV-ERLQIAVDSA-----QGLEYLHYGC 512
G+I +E S L + + +++ ER + + A Q LE + +
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 513 KPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
++HRD+K NIL++ + + K+ DFG + D + T GT Y PE+
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRY 202
Query: 572 NWLNEKS-DVYSFGVVLLEIITGRRP 596
+ + +S V+S G++L +++ G P
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
+LG GGFG VY G + DN VA+K + ++ RV + ++ +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV---PMEVVLLKKVSSG 71
Query: 464 NMGLI-----YEYMASGTLDQYLKGKKEHMLNWV-ERLQIAVDSA-----QGLEYLHYGC 512
G+I +E S L + + +++ ER + + A Q LE + +
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 513 KPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
++HRD+K NIL++ + + K+ DFG + D + T GT Y PE+
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRY 187
Query: 572 NWLNEKS-DVYSFGVVLLEIITGRRP 596
+ + +S V+S G++L +++ G P
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
+LG GGFG VY G + DN VA+K + ++ RV + ++ +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV---PMEVVLLKKVSSG 99
Query: 464 NMGLI-----YEYMASGTLDQYLKGKKEHMLNWV-ERLQIAVDSA-----QGLEYLHYGC 512
G+I +E S L + + +++ ER + + A Q LE + +
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 513 KPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
++HRD+K NIL++ + + K+ DFG + D + T GT Y PE+
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRY 215
Query: 572 NWLNEKS-DVYSFGVVLLEIITGRRP 596
+ + +S V+S G++L +++ G P
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
+LG GGFG VY G + DN VA+K + ++ RV + ++ +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV---PMEVVLLKKVSSG 86
Query: 464 NMGLI-----YEYMASGTLDQYLKGKKEHMLNWV-ERLQIAVDSA-----QGLEYLHYGC 512
G+I +E S L + + +++ ER + + A Q LE + +
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 513 KPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
++HRD+K NIL++ + + K+ DFG + D + T GT Y PE+
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRY 202
Query: 572 NWLNEKS-DVYSFGVVLLEIITGRRP 596
+ + +S V+S G++L +++ G P
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
+LG GGFG VY G + DN VA+K + ++ RV + ++ +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV---PMEVVLLKKVSSG 72
Query: 464 NMGLI-----YEYMASGTLDQYLKGKKEHMLNWV-ERLQIAVDSA-----QGLEYLHYGC 512
G+I +E S L + + +++ ER + + A Q LE + +
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 513 KPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
++HRD+K NIL++ + + K+ DFG + D + T GT Y PE+
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRY 188
Query: 572 NWLNEKS-DVYSFGVVLLEIITGRRP 596
+ + +S V+S G++L +++ G P
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
+LG GGFG VY G + DN VA+K + ++ RV + ++ +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV---PMEVVLLKKVSSG 106
Query: 464 NMGLI-----YEYMASGTLDQYLKGKKEHMLNWV-ERLQIAVDSA-----QGLEYLHYGC 512
G+I +E S L + + +++ ER + + A Q LE + +
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 513 KPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
++HRD+K NIL++ + + K+ DFG + D + T GT Y PE+
Sbjct: 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRY 222
Query: 572 NWLNEKS-DVYSFGVVLLEIITGRRP 596
+ + +S V+S G++L +++ G P
Sbjct: 223 HRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 405 VLGKGGFGEVYHG-SLDDNQQVAVKMLSSSCCFQLLQVKLLMRVHHRNLTALIGYCIEGN 463
+LG GGFG VY G + DN VA+K + ++ RV + ++ +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV---PMEVVLLKKVSSG 114
Query: 464 NMGLI-----YEYMASGTLDQYLKGKKEHMLNWV-ERLQIAVDSA-----QGLEYLHYGC 512
G+I +E S L + + +++ ER + + A Q LE + +
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 513 KPPIVHRDVKSSNILLN-EKLQAKIADFGLSRIFSIESSDQISTAVAGTPGYLDPEYYVL 571
++HRD+K NIL++ + + K+ DFG + D + T GT Y PE+
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRY 230
Query: 572 NWLNEKS-DVYSFGVVLLEIITGRRP 596
+ + +S V+S G++L +++ G P
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIP 256
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,933,916
Number of Sequences: 62578
Number of extensions: 804535
Number of successful extensions: 4830
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 239
Number of HSP's that attempted gapping in prelim test: 2124
Number of HSP's gapped (non-prelim): 1336
length of query: 704
length of database: 14,973,337
effective HSP length: 106
effective length of query: 598
effective length of database: 8,340,069
effective search space: 4987361262
effective search space used: 4987361262
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)