Query 037262
Match_columns 107
No_of_seqs 146 out of 1144
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 17:44:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037262.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037262hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f75_P Toxopain-2, cathepsin L 99.8 2.1E-21 7E-26 129.0 7.3 66 42-107 16-81 (106)
2 2l95_A Crammer, LP06209P; cyst 99.8 2.5E-20 8.6E-25 117.6 4.8 58 49-107 8-69 (80)
3 3tnx_A Papain; hydrolase, cyto 99.8 1.1E-19 3.9E-24 141.9 7.5 75 27-107 48-122 (363)
4 3qj3_A Cathepsin L-like protei 99.7 3E-18 1E-22 132.2 6.2 68 40-107 11-82 (331)
5 3qt4_A Cathepsin-L-like midgut 99.7 1E-17 3.6E-22 129.2 4.9 66 42-107 18-87 (329)
6 1pci_A Procaricain; zymogen, h 99.7 2.3E-17 7.9E-22 126.7 6.3 67 41-107 12-78 (322)
7 2c0y_A Procathepsin S; proenzy 99.6 8.5E-17 2.9E-21 123.2 4.6 65 43-107 4-72 (315)
8 1by8_A Protein (procathepsin K 99.6 1E-16 3.5E-21 122.7 4.4 62 46-107 6-71 (314)
9 1cs8_A Human procathepsin L; p 99.6 1.4E-16 4.8E-21 122.0 5.1 61 46-107 7-71 (316)
10 2o6x_A Procathepsin L1, secret 99.6 9E-16 3.1E-20 117.3 4.6 58 49-107 3-64 (310)
11 1xkg_A DER P I, major mite fec 99.3 7.5E-13 2.6E-17 101.3 5.0 51 50-107 7-57 (312)
12 3pdf_A Cathepsin C, dipeptidyl 98.4 3.6E-08 1.2E-12 78.6 0.0 42 66-107 135-177 (441)
13 3hhi_A Cathepsin B-like cystei 97.2 4.6E-05 1.6E-09 58.3 0.0 38 70-107 3-42 (325)
14 3pbh_A Procathepsin B; thiol p 95.0 0.0044 1.5E-07 47.0 0.1 28 78-106 11-38 (317)
15 3j1r_A Archaeal adhesion filam 60.0 8.7 0.0003 18.6 2.4 17 6-22 2-18 (26)
16 4gd5_A Phosphate ABC transport 45.0 2.4 8.4E-05 30.2 -1.4 7 3-9 4-10 (279)
17 2pq4_B Periplasmic nitrate red 28.4 64 0.0022 16.3 3.4 14 1-14 1-14 (35)
18 3uor_A ABC transporter sugar b 27.1 22 0.00075 26.8 1.3 14 49-62 42-55 (458)
No 1
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.85 E-value=2.1e-21 Score=129.01 Aligned_cols=66 Identities=30% Similarity=0.626 Sum_probs=62.2
Q ss_pred CChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCceeecccCCCCCcccC
Q 037262 42 RTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 42 ~~~~~~~~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~~~sy~lglN~FaDlT~eEf 107 (107)
.++..+...|+.|+.+|+|.|.+..|+..|+.+|++|++.|++||+++.+|++|+|+|||||++||
T Consensus 16 ~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~sy~lglN~FaDLT~eEF 81 (106)
T 3f75_P 16 WKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEF 81 (106)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSCCSEEECCCTTTTCCHHHH
T ss_pred cCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCcccccCCHHHH
Confidence 456778999999999999999998999999999999999999999988899999999999999996
No 2
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.80 E-value=2.5e-20 Score=117.59 Aligned_cols=58 Identities=36% Similarity=0.576 Sum_probs=54.2
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC----CCCceeecccCCCCCcccC
Q 037262 49 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 49 ~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~----~~sy~lglN~FaDlT~eEf 107 (107)
..|+.|+.+|+|.|.+..|+..| .+|++|++.|++||.. ..+|++|+|+|||||++||
T Consensus 8 ~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf 69 (80)
T 2l95_A 8 EEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF 69 (80)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH
Confidence 57999999999999988899999 9999999999999975 4789999999999999996
No 3
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=99.79 E-value=1.1e-19 Score=141.94 Aligned_cols=75 Identities=45% Similarity=0.921 Sum_probs=65.3
Q ss_pred cccccccccccCCCCCChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCceeecccCCCCCccc
Q 037262 27 IVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEE 106 (107)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~~~sy~lglN~FaDlT~eE 106 (107)
++.+..++ +.+++.+...|++|+.+|+|.|.+.+|+.+|+.+|++|+++|++||+++.+|++|+|+|+|||.+|
T Consensus 48 ~~~y~~~d------l~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eE 121 (363)
T 3tnx_A 48 IVGYSQND------LTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDE 121 (363)
T ss_dssp ------CC------SSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHH
T ss_pred ccCCChhh------hcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHH
Confidence 34455555 667889999999999999999999999999999999999999999999899999999999999999
Q ss_pred C
Q 037262 107 Y 107 (107)
Q Consensus 107 f 107 (107)
|
T Consensus 122 f 122 (363)
T 3tnx_A 122 F 122 (363)
T ss_dssp H
T ss_pred H
Confidence 6
No 4
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=99.73 E-value=3e-18 Score=132.18 Aligned_cols=68 Identities=29% Similarity=0.430 Sum_probs=62.0
Q ss_pred CCCChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC----CCCceeecccCCCCCcccC
Q 037262 40 SWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 40 ~~~~~~~~~~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~----~~sy~lglN~FaDlT~eEf 107 (107)
+.+.+..+...|+.|+.+|+|.|.+..|+.+|+.+|++|+++|++||++ +.+|++|+|+|+|||.+||
T Consensus 11 ~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf 82 (331)
T 3qj3_A 11 SALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEM 82 (331)
T ss_dssp --CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHH
Confidence 3556788999999999999999999899999999999999999999975 6899999999999999996
No 5
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=99.69 E-value=1e-17 Score=129.20 Aligned_cols=66 Identities=30% Similarity=0.512 Sum_probs=59.9
Q ss_pred CChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC----CCCceeecccCCCCCcccC
Q 037262 42 RTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 42 ~~~~~~~~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~----~~sy~lglN~FaDlT~eEf 107 (107)
.++..+...|+.|+.+|+|.|.+..|+..|+.+|++|+++|++||++ +.+|++|+|+|+|||.+||
T Consensus 18 ~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf 87 (329)
T 3qt4_A 18 LPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEF 87 (329)
T ss_dssp --CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHH
T ss_pred cCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHH
Confidence 34567889999999999999999889999999999999999999974 5899999999999999996
No 6
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=99.69 E-value=2.3e-17 Score=126.74 Aligned_cols=67 Identities=45% Similarity=0.907 Sum_probs=61.9
Q ss_pred CCChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCceeecccCCCCCcccC
Q 037262 41 WRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 41 ~~~~~~~~~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~~~sy~lglN~FaDlT~eEf 107 (107)
+.+++.+...|+.|+.+|+|.|.+..|+..|+.+|++|+++|++||+++.+|++|+|+|+|||.+||
T Consensus 12 ~~~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~~g~N~FaDlt~eEf 78 (322)
T 1pci_A 12 LTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEF 78 (322)
T ss_dssp CTHHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSCTTTTSCHHHH
T ss_pred ccchHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCceEEecCccccCCHHHH
Confidence 3456778899999999999999998999999999999999999999877899999999999999986
No 7
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=99.64 E-value=8.5e-17 Score=123.22 Aligned_cols=65 Identities=32% Similarity=0.562 Sum_probs=58.8
Q ss_pred ChHHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC----CCCceeecccCCCCCcccC
Q 037262 43 TDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 43 ~~~~~~~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~----~~sy~lglN~FaDlT~eEf 107 (107)
.+..+...|+.|+.+|+|.|.+..|+..|+.+|++|+++|++||++ ..+|++|+|+|+|||.+||
T Consensus 4 ~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf 72 (315)
T 2c0y_A 4 KDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEV 72 (315)
T ss_dssp CCGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHH
Confidence 3445678999999999999998889999999999999999999974 3789999999999999986
No 8
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=99.64 E-value=1e-16 Score=122.68 Aligned_cols=62 Identities=34% Similarity=0.557 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC----CCCceeecccCCCCCcccC
Q 037262 46 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 46 ~~~~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~----~~sy~lglN~FaDlT~eEf 107 (107)
.++..|+.|+.+|+|.|.+..|+..|+.+|++|+++|++||++ ..+|++|+|+|+|||.+||
T Consensus 6 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf 71 (314)
T 1by8_A 6 ILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEV 71 (314)
T ss_dssp THHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHH
Confidence 4678899999999999999899999999999999999999974 3789999999999999986
No 9
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=99.63 E-value=1.4e-16 Score=122.04 Aligned_cols=61 Identities=28% Similarity=0.662 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC----CCCceeecccCCCCCcccC
Q 037262 46 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 46 ~~~~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~----~~sy~lglN~FaDlT~eEf 107 (107)
.+...|+.|+.+|+|.| +..|+..|+.+|++|+++|++||++ ..+|++|+|+|+|||.+||
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf 71 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEF 71 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHH
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHH
Confidence 46789999999999999 7789999999999999999999974 5799999999999999986
No 10
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=99.58 E-value=9e-16 Score=117.27 Aligned_cols=58 Identities=36% Similarity=0.719 Sum_probs=54.1
Q ss_pred HHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcC----CCCceeecccCCCCCcccC
Q 037262 49 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 49 ~~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~----~~sy~lglN~FaDlT~eEf 107 (107)
..|+.|+.+|+|.|.+..|+.+| .+|++|+++|++||++ +.+|++|+|+|+|||.+||
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf 64 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEF 64 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHH
Confidence 57999999999999988899999 9999999999999975 5789999999999999986
No 11
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=99.34 E-value=7.5e-13 Score=101.34 Aligned_cols=51 Identities=24% Similarity=0.531 Sum_probs=47.7
Q ss_pred HHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHhcCCCCceeecccCCCCCcccC
Q 037262 50 MFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEY 107 (107)
Q Consensus 50 ~F~~f~~~~~K~Y~~~~E~~~R~~~F~~N~~~I~~hN~~~~sy~lglN~FaDlT~eEf 107 (107)
.|+.|+.+|+|.|.+..|+..|+.+|++|+++|++ |. + |+|+|+|||.+||
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~---~---g~N~F~Dlt~eEf 57 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG---G---AINHLSDLSLDEF 57 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC---C---CCCTTTTSCHHHH
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc---C---CCCcccCCCHHHH
Confidence 59999999999999989999999999999999999 75 2 9999999999986
No 12
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=98.39 E-value=3.6e-08 Score=78.58 Aligned_cols=42 Identities=12% Similarity=0.285 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCceee-cccCCCCCcccC
Q 037262 66 GEKEKRFEIFKENLRFIDEHNSENRTYKVG-LNRFADLTNEEY 107 (107)
Q Consensus 66 ~E~~~R~~~F~~N~~~I~~hN~~~~sy~lg-lN~FaDlT~eEf 107 (107)
.++.+|+.+|++|+++|++||++..+|+++ +|+|+|||.+||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~~~~~~~~~n~faDlT~eEf 177 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDM 177 (441)
T ss_dssp -------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCceEeecccccccCCHHHH
Confidence 455789999999999999999887899998 899999999997
No 13
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=97.23 E-value=4.6e-05 Score=58.31 Aligned_cols=38 Identities=16% Similarity=0.112 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhcC-CCCceeecc-cCCCCCcccC
Q 037262 70 KRFEIFKENLRFIDEHNSE-NRTYKVGLN-RFADLTNEEY 107 (107)
Q Consensus 70 ~R~~~F~~N~~~I~~hN~~-~~sy~lglN-~FaDlT~eEf 107 (107)
.|+.....+.++|+++|++ +.+|++|+| +|+|||.+||
T Consensus 3 ~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~ 42 (325)
T 3hhi_A 3 VAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREA 42 (325)
T ss_dssp ----------------------------------------
T ss_pred cccccccccHHHHHHHHhCCCCceEEecccccccCCHHHH
Confidence 4567777889999999986 579999999 8999999997
No 14
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=94.98 E-value=0.0044 Score=46.97 Aligned_cols=28 Identities=21% Similarity=0.342 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCCCCceeecccCCCCCccc
Q 037262 78 NLRFIDEHNSENRTYKVGLNRFADLTNEE 106 (107)
Q Consensus 78 N~~~I~~hN~~~~sy~lglN~FaDlT~eE 106 (107)
+.++|+.+|+.+.+|++|+| |+|+|.||
T Consensus 11 ~~~~i~~~N~~~~~~~~~~n-f~~~~~e~ 38 (317)
T 3pbh_A 11 SDELVNYVNKRNTTWQAGHN-FYNVDMSY 38 (317)
T ss_dssp CHHHHHHHHHHTCSEEECCC-CSSCCHHH
T ss_pred cHHHHHHHHCCCCCeEEeec-cccCCHHH
Confidence 46789999977889999999 99988876
No 15
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=60.00 E-value=8.7 Score=18.60 Aligned_cols=17 Identities=47% Similarity=0.759 Sum_probs=11.9
Q ss_pred hhHHHHHHHHHHHHHhh
Q 037262 6 SPTMAMFLLFLFTVSSA 22 (107)
Q Consensus 6 ~~~~~~~l~~~~a~~~~ 22 (107)
||...++||++.|++++
T Consensus 2 spiVA~~lLIviav~aa 18 (26)
T 3j1r_A 2 SPVIATLLLILIAVAAA 18 (26)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHH
Confidence 57777888888666553
No 16
>4gd5_A Phosphate ABC transporter, phosphate-binding PROT; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE; 1.70A {Clostridium perfringens}
Probab=45.05 E-value=2.4 Score=30.25 Aligned_cols=7 Identities=14% Similarity=0.615 Sum_probs=0.0
Q ss_pred CCchhHH
Q 037262 3 LFRSPTM 9 (107)
Q Consensus 3 ~~~~~~~ 9 (107)
|+|+.++
T Consensus 4 M~kk~~~ 10 (279)
T 4gd5_A 4 MFKKRLI 10 (279)
T ss_dssp -------
T ss_pred cHHHHHH
Confidence 4555544
No 17
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=28.43 E-value=64 Score=16.33 Aligned_cols=14 Identities=29% Similarity=0.188 Sum_probs=10.7
Q ss_pred CCCCchhHHHHHHH
Q 037262 1 MGLFRSPTMAMFLL 14 (107)
Q Consensus 1 ~~~~~~~~~~~~l~ 14 (107)
|.+.|+.++...-.
T Consensus 1 M~lsRR~FLK~~aa 14 (35)
T 2pq4_B 1 MKLSRRSFMKANAV 14 (35)
T ss_dssp CCCCSHHHHHHHHH
T ss_pred CCCcHHHHHHHHHH
Confidence 88999998775443
No 18
>3uor_A ABC transporter sugar binding protein; ALFA/beta protein, periplasmic-binding protein, maltose, SUG binding protein; 2.20A {Xanthomonas axonopodis PV}
Probab=27.10 E-value=22 Score=26.78 Aligned_cols=14 Identities=7% Similarity=0.100 Sum_probs=7.5
Q ss_pred HHHHHHHHHhCCcc
Q 037262 49 AMFEAWLVKHGKAY 62 (107)
Q Consensus 49 ~~F~~f~~~~~K~Y 62 (107)
..++....+|++.|
T Consensus 42 ~~~~~~~~~F~~~~ 55 (458)
T 3uor_A 42 EVVAELVADFEKQN 55 (458)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHC
Confidence 34555555555555
Done!