BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037271
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FTA0|GEML4_ARATH GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1
Length = 222
Score = 239 bits (610), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 119/178 (66%), Positives = 144/178 (80%), Gaps = 5/178 (2%)
Query: 2 VDSVLKRVNKLGKRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFKQLF 61
V S+LKR K+ D F +GV++ ++ PK+TETVK KLSLGA+ILQVGG+EKIFK+LF
Sbjct: 47 VKSILKR-----KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLF 101
Query: 62 AVKEEEKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGELIRVHYKVLI 121
V E EKL K QCYLSTTAGPIAGLLFIS++K+AFCSERS+K S +G++IRVHYKV I
Sbjct: 102 RVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSI 161
Query: 122 PLGKIKRVNQSVNMKKQSEKYIEVYTVDGFDFWFMGFLNYQKAFKYLQQAISQSCTDD 179
PL KI RVNQS N KK S+KY+EV TVDGFDFWFMGFL+YQKAF L++A+S S D+
Sbjct: 162 PLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALSLSFEDN 219
>sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370
PE=3 SV=1
Length = 219
Score = 236 bits (601), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/162 (70%), Positives = 137/162 (84%)
Query: 14 KRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKLLKAC 73
K+ D+F +GV++ +LGPK+TETVK KLSLGA+ILQ+GG+EKI+K+LF V +EEKL KA
Sbjct: 55 KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114
Query: 74 QCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGELIRVHYKVLIPLGKIKRVNQSV 133
QCYLSTTAGPIAGLLFIS++K+AFCSERS+K S +GEL RVHYKV IPL KI VNQS
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQ 174
Query: 134 NMKKQSEKYIEVYTVDGFDFWFMGFLNYQKAFKYLQQAISQS 175
N K S+KY+EV TVDGFDFWFMGFL+YQKAF L+QA+S S
Sbjct: 175 NTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALSLS 216
>sp|Q9FMW6|GEML6_ARATH GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2
Length = 218
Score = 225 bits (573), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 134/161 (83%)
Query: 14 KRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKLLKAC 73
K+ D+F +G ++ +LGPK+TETVK KLSLGAKILQ+GG+EKI+K+LF V ++EKL KA
Sbjct: 55 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAY 114
Query: 74 QCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGELIRVHYKVLIPLGKIKRVNQSV 133
QCYLSTTAGPIAGLLFIS++K+AFCSERS+K S +G L RVHYKV IPL KI VNQS
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQ 174
Query: 134 NMKKQSEKYIEVYTVDGFDFWFMGFLNYQKAFKYLQQAISQ 174
N KK S+KY+E+ T+D FDFWFMGF++YQKAF L++A++
Sbjct: 175 NTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNN 215
>sp|Q9FMW5|GEML7_ARATH GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1
Length = 210
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/161 (64%), Positives = 134/161 (83%)
Query: 14 KRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKLLKAC 73
K+ D+F +G ++ +LGPK+TETVK KLSLGAKILQ+GG+EKI+K+LF V ++EKL KA
Sbjct: 47 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106
Query: 74 QCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGELIRVHYKVLIPLGKIKRVNQSV 133
QCYLSTT G IAGLLFIS++K+AFCSERS+K S +G+L RVHYKV IPL KI VNQS
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQ 166
Query: 134 NMKKQSEKYIEVYTVDGFDFWFMGFLNYQKAFKYLQQAISQ 174
N KK S++Y+EV TVD +DFWFMGF++YQKAF L++A+++
Sbjct: 167 NTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNE 207
>sp|Q9LYV6|GEML5_ARATH GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1
Length = 272
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 110/173 (63%)
Query: 1 KVDSVLKRVNKLGKRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFKQL 60
++ V+ + ++A+ A + +++ GP ++ET GK++L AK + GG E +F+Q+
Sbjct: 89 PLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQI 148
Query: 61 FAVKEEEKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGELIRVHYKVL 120
F + E L K CYLSTT GP+AG +++S +VAFCS+R L F + G+ +Y+V+
Sbjct: 149 FGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVV 208
Query: 121 IPLGKIKRVNQSVNMKKQSEKYIEVYTVDGFDFWFMGFLNYQKAFKYLQQAIS 173
+PL + VN V + EKYI++ TVDG DFWFMGF+NY+KA +L ++S
Sbjct: 209 VPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVS 261
>sp|Q8S8F8|GEM_ARATH GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1
SV=1
Length = 299
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Query: 7 KRVNKLGKRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFKQLFAVKEE 66
KRV + K+ ++ A +H+R P + G+++ K+ GG EKIF+Q F E
Sbjct: 127 KRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPE 186
Query: 67 EKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGELIRVHYKVLIPLGKI 126
E+LL + CYLST+AGP+ G+L+IS+ K+A+CS+ L Y + + +YKV+IPL ++
Sbjct: 187 EQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLS-YKNGDQTEWSYYKVVIPLHQL 245
Query: 127 KRVNQSVNMKKQSEKYIEVYTVDGFDFWFMGFLNYQKAFKYLQQAI 172
K VN S ++ +EKYI+V +VD +FWFMGFLNY A LQ ++
Sbjct: 246 KAVNPSASIVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291
>sp|Q9SE96|GEML1_ARATH GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1
Length = 259
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 113/179 (63%), Gaps = 10/179 (5%)
Query: 2 VDSVLKRVNKLGK-------RADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGME 54
+DSV + K GK +A++ A +H++ GP + + +++ G KIL GG E
Sbjct: 78 MDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYE 137
Query: 55 KIFKQLFAVKEEEKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGE-LI 113
K+FKQ F +EKLLK CYLST+AGP+ G++++ST K+AF S+ L + +GE +
Sbjct: 138 KVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSY--KEGEQTL 195
Query: 114 RVHYKVLIPLGKIKRVNQSVNMKKQSEKYIEVYTVDGFDFWFMGFLNYQKAFKYLQQAI 172
+YKV++P ++K VN S + S+KYI+V ++D +FWFMGF+ Y+ A K LQ+A+
Sbjct: 196 WSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEAV 254
>sp|Q9M122|GEML2_ARATH GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1
Length = 233
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 116/181 (64%), Gaps = 8/181 (4%)
Query: 3 DSVLKRVNKLGKR-------ADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEK 55
D VL+ +N+ GK+ A+ G+K+H++ P I++ +LS G K++ GG E+
Sbjct: 47 DKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPER 106
Query: 56 IFKQLFAVKEEEKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSK-GELIR 114
+F++ F V EKLL + CY+STT+GP+ G+++IS ++AFCS+ +++ SS G +
Sbjct: 107 VFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVA 166
Query: 115 VHYKVLIPLGKIKRVNQSVNMKKQSEKYIEVYTVDGFDFWFMGFLNYQKAFKYLQQAISQ 174
+YKV++ KI ++ S N+ K SE+Y+ + T DGF+FWFMGF++Y AF L +A+
Sbjct: 167 AYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCLNKALLN 226
Query: 175 S 175
S
Sbjct: 227 S 227
>sp|Q9M063|GEML3_ARATH Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100
PE=3 SV=2
Length = 239
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 21/166 (12%)
Query: 7 KRVNKLGKRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFKQLFAVKEE 66
+RV + +A++ A +H G+++ K+L GG EKIF+Q F E
Sbjct: 86 RRVGEAAMKAESLAGNTWQHP------LRAAMGRIAQSTKVLAEGGYEKIFRQTFETVPE 139
Query: 67 EKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGELIRVHYKVLIPLGKI 126
E+L + CYLST+AGP+ G+L++ST K+A+CS+ SL V+IPL ++
Sbjct: 140 EQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSL---------------VVIPLHQL 184
Query: 127 KRVNQSVNMKKQSEKYIEVYTVDGFDFWFMGFLNYQKAFKYLQQAI 172
K VN S++ +EKYI+V +VD +FWFMGFLNY+ A LQ +
Sbjct: 185 KSVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTL 230
>sp|Q9FGS8|C2GR2_ARATH C2 and GRAM domain-containing protein At5g50170 OS=Arabidopsis
thaliana GN=At5g50170 PE=2 SV=1
Length = 1027
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 57 FKQLFAVKEEEKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSE---RSLKFY 106
F++LF + EE LLK CYL P+ G LF+S VAF S KFY
Sbjct: 694 FQKLFGLPHEEFLLKEYTCYLKRKL-PVQGKLFLSARIVAFYSNVFGHKTKFY 745
>sp|Q6ZNJ1|NBEL2_HUMAN Neurobeachin-like protein 2 OS=Homo sapiens GN=NBEAL2 PE=1 SV=2
Length = 2754
Score = 36.2 bits (82), Expect = 0.14, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 64 KEEEKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGELIRVHYKVLIPL 123
++ EKL+ + +C L T + GLL ++T+ V F + + + +G + Y PL
Sbjct: 1915 EQREKLVLSAECQLVTVVAVVPGLLEVTTQNVYFYDGSTERVETEEG----IGYDFRRPL 1970
Query: 124 GKIKRVN-QSVNMKKQSEKYIEVYTVDGFDFWFMGFLNY 161
+++ V+ + N+++ + +E++ +D ++ FLN+
Sbjct: 1971 AQLREVHLRRFNLRRSA---LELFFIDQANY----FLNF 2002
>sp|Q6C8M8|ATG26_YARLI Sterol 3-beta-glucosyltransferase OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=ATG26 PE=3 SV=3
Length = 1456
Score = 34.7 bits (78), Expect = 0.32, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 57 FKQLFAVKEEEKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSKGELIRVH 116
F++ FA+ EE+L+ + C+L P G +++ST V F S +R
Sbjct: 829 FQKRFALGTEERLIASYHCHLHRGGIPTYGKMYVSTNYVTFRS------------FLRTK 876
Query: 117 YKVLIPLGKIKRVNQSVNMKKQSEKYIEVYTVDGFDFWFMGF 158
+++PL ++ + K V T+ G++ F F
Sbjct: 877 TLMIVPLKVVENATKDSGFKFGYSGL--VLTIQGYEEIFFEF 916
>sp|Q6ZQA0|NBEL2_MOUSE Neurobeachin-like protein 2 OS=Mus musculus GN=Nbeal2 PE=2 SV=2
Length = 2742
Score = 33.9 bits (76), Expect = 0.61, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 50 VGGMEKIFKQLFAVKEEEKLLKACQCYLSTTAGPIAGLLFISTEKVAFCSERSLKFYSSK 109
+ +E + + ++ EKL+ + +C L T + GLL I+T+ V F + + + +
Sbjct: 1889 LAALESLMEAAELDEKREKLVLSAECQLVTVVAVVPGLLEITTQHVYFYDGSTERVETEE 1948
Query: 110 GELIRVHYKVLIPLGKIKRVN-QSVNMKKQSEKYIEVYTVDGFDFWFMGFLNY 161
G + + PL +++ V+ + N+++ + +E++ +D ++ FLN+
Sbjct: 1949 G----IGHDFRRPLAQLREVHLRRFNLRRSA---LELFFIDQSNY----FLNF 1990
>sp|Q8UCT2|URE1_AGRT5 Urease subunit alpha OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=ureC PE=3 SV=1
Length = 569
Score = 33.5 bits (75), Expect = 0.82, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 1 KVDSVLK--RVNKLGKRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFK 58
K D LK R++ +GK A N + + +GP TE + G+ KIL GGM+
Sbjct: 85 KADVGLKNGRIHAIGK-AGNPDTQPGVTIIVGPS-TEAIAGE----GKILTAGGMDAHIH 138
Query: 59 QLFAVKEEEKLLKACQCYLSTTAGPIAGLL 88
+ + EE L+ C L +GP G L
Sbjct: 139 YICPQQIEEALMSGVTCMLGGGSGPAHGTL 168
>sp|A8GM76|SECF_RICAH Protein translocase subunit SecF OS=Rickettsia akari (strain
Hartford) GN=secF PE=3 SV=1
Length = 308
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 18 NFASGVKEHVRL--GPKITET--VKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKLLKAC 73
+FA G+ VRL P + + V G+L +G +LQ G E+ F + EE L+K
Sbjct: 49 DFAGGIVIEVRLDQAPDLPKMRGVLGELGIGEVVLQNFGSERDLSIRFGISSEENLMKNI 108
Query: 74 QC 75
+
Sbjct: 109 EL 110
>sp|Q875K1|ERG6_CLAL4 Sterol 24-C-methyltransferase OS=Clavispora lusitaniae (strain ATCC
42720) GN=ERG6 PE=3 SV=1
Length = 375
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 8 RVNKLGKRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFKQL 60
R +K+G+ G+ E + L PK ++ V G L A L GG +K+F +
Sbjct: 311 RTSKIGRTVTTNVVGLMEKIGLAPKGSKQVTGALEDAAVNLVAGGEQKLFTPM 363
>sp|A8GQT5|SECF_RICRS Protein translocase subunit SecF OS=Rickettsia rickettsii (strain
Sheila Smith) GN=secF PE=2 SV=1
Length = 308
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 18 NFASGVKEHVRL--GPKITET--VKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKLLKAC 73
+FA G+ VRL P + + V GKL +G +LQ G E+ F EE L+K
Sbjct: 49 DFAGGIVIEVRLDQAPDLPKMRGVLGKLGIGEVVLQNFGSERDLSIRFGSNSEENLMKNI 108
Query: 74 QC 75
+
Sbjct: 109 EL 110
>sp|A8F0L9|SECF_RICM5 Protein translocase subunit SecF OS=Rickettsia massiliae (strain
Mtu5) GN=secF PE=3 SV=2
Length = 308
Score = 31.2 bits (69), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 18 NFASGVKEHVRL--GPKITET--VKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKLLKAC 73
+FA G+ VRL P + + V GKL +G +LQ G E+ F EE L+K
Sbjct: 49 DFAGGIVIEVRLDQAPDLPKMRGVLGKLGIGEVVLQNFGSERDLSIRFGSSSEENLMKNI 108
Query: 74 QC 75
+
Sbjct: 109 EL 110
>sp|Q92JB3|SECF_RICCN Protein translocase subunit SecF OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=secF PE=3 SV=1
Length = 308
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 18 NFASGVKEHVRL--GPKITET--VKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKLLKAC 73
+FA G+ VRL P + + V GKL +G +LQ G E+ F EE L+K
Sbjct: 49 DFAGGIVIEVRLDQAPDLPKMRGVLGKLGIGEVVLQNFGSERDLSIRFGSSSEENLMKNI 108
Query: 74 QC 75
+
Sbjct: 109 EL 110
>sp|Q1RH99|SECF_RICBR Protein translocase subunit SecF OS=Rickettsia bellii (strain
RML369-C) GN=secF PE=3 SV=1
Length = 303
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 18 NFASGVKEHVRLG-----PKITETVKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKLLKA 72
+FA G+ VRL PK+ + V G+L +G +LQ G E+ F E+ L+K
Sbjct: 49 DFAGGIVIEVRLDQTPDLPKMRQ-VLGELGIGEVVLQNFGSERDLSIRFGSSSEDNLMKN 107
Query: 73 CQCYLST 79
+ ST
Sbjct: 108 IELIKST 114
>sp|A8GYD9|SECF_RICB8 Protein translocase subunit SecF OS=Rickettsia bellii (strain OSU
85-389) GN=secF PE=3 SV=1
Length = 303
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 18 NFASGVKEHVRLG-----PKITETVKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKLLKA 72
+FA G+ VRL PK+ + V G+L +G +LQ G E+ F E+ L+K
Sbjct: 49 DFAGGIVIEVRLDQTPDLPKMRQ-VLGELGIGEVVLQNFGSERDLSIRFGSSSEDNLMKN 107
Query: 73 CQCYLST 79
+ ST
Sbjct: 108 IELIKST 114
>sp|Q32N22|TAF1B_XENLA TATA box-binding protein-associated factor RNA polymerase I subunit
B OS=Xenopus laevis GN=taf1b PE=2 SV=1
Length = 582
Score = 30.0 bits (66), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 118 KVLIPLGKIKRVNQSVNMKKQSEKYIEVYTVDGFDF 153
+V + LGKI+ +++ + K++ EK E Y +GF F
Sbjct: 48 EVFVNLGKIQYISRGLRKKRKQEKGWEWYVCEGFQF 83
>sp|Q2SR96|PURA_MYCCT Adenylosuccinate synthetase OS=Mycoplasma capricolum subsp.
capricolum (strain California kid / ATCC 27343 / NCTC
10154) GN=purA PE=3 SV=1
Length = 432
Score = 30.0 bits (66), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 10 NKLGKRADNFASGVKEHVRLGPKITETVKGKLSLGAKILQVGGMEKIFKQLFAVKEEEKL 69
NKL +R + S + R+G + V K ++ +VGG++++F LF V + E+
Sbjct: 290 NKLRERGREYGSNTGKPRRIG--WLDLVALKYAI-----RVGGIDQLFLTLFDVLDTEEK 342
Query: 70 LKACQCY 76
+K C Y
Sbjct: 343 IKICTAY 349
>sp|O81866|P2A02_ARATH Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2
PE=2 SV=1
Length = 194
Score = 30.0 bits (66), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 107 SSKGELIRVHYKVLIPLGKIKRVNQSVNMKKQSEKYIEV 145
S+KG RV++K+++P G+ K ++VN+ +++ K++E+
Sbjct: 114 SAKGWDFRVNFKLVLPTGETKERRENVNLLERN-KWVEI 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,024,896
Number of Sequences: 539616
Number of extensions: 2266253
Number of successful extensions: 6510
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 6491
Number of HSP's gapped (non-prelim): 32
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)