BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037274
(245 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
+L +EI HPNI+ Y + + + +L+ GS+ I+ + ++
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 108
Query: 73 MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
H+ G+ + +A +E L+GL YL G H+++ AG+IL
Sbjct: 109 AKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
Query: 119 ----IFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
D TRN PEV+ Y K+DIW GITA++ G P
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 227
Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
+ + ++ L P S V E + K+F M+ +CL DP KRP A
Sbjct: 228 HKYPPMKVLMLTLQNDPPSLETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTA 282
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
+L +EI HPNI+ Y + + + +L+ GS+ I+ + ++
Sbjct: 54 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKH----------IV 103
Query: 73 MSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHILHN------------- 118
H+ G+ + +A +E L+GL YL G H+++ AG+IL
Sbjct: 104 AKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
Query: 119 ----IFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
D TRN PEV+ Y K+DIW GITA++ G P
Sbjct: 164 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY 222
Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
+ + ++ L P S V E + K+F M+ +CL DP KRP A
Sbjct: 223 HKYPPMKVLMLTLQNDPPSLETGVQDKE----MLKKYGKSFRKMISLCLQKDPEKRPTA 277
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 92/240 (38%), Gaps = 44/240 (18%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
++ +EI + P+++ Y + L+ C GS+ I+ R
Sbjct: 70 EIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR----------- 118
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXX 132
+T D +A + TLKGL YL H++I AG+IL N
Sbjct: 119 -----NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAG 173
Query: 133 XXXXXXX------------XPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
PEV+ + Y+C +DIW +GITA++ G P + D+
Sbjct: 174 QLTDXMAKRNXVIGTPFWMAPEVIQ--EIGYNCVADIWSLGITAIEMAEGKPPYA---DI 228
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTL-SKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
M + M + N T L S NF + VK CL P +R A Q+LQ
Sbjct: 229 HPMRAIFM---------IPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATA-TQLLQ 278
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 40/236 (16%)
Query: 9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR-PLNSPA 67
E++ + +E+ + L HPN I + + + C+ + D + ++ PL
Sbjct: 57 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE-- 114
Query: 68 ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------I 119
V+ A+ H L+GL+YL + H+++ AG+IL +
Sbjct: 115 ---------------VEIAAVTHG-ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGD 158
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDD-YYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
F + PEV+ D+ Y K D+W +GIT ++ R+
Sbjct: 159 FGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKP 212
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
L M M S +A NE + S+ F N V CL P RP +E
Sbjct: 213 PLFNMNAM------SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 262
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 29/162 (17%)
Query: 86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
+A +E LKGL YL E H++I A ++L + D DT+
Sbjct: 118 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNXF 176
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
PEV+ Y K+DIW +GITA++ G P S DL M ++L PK
Sbjct: 177 VGTPFWMAPEVIK--QSAYDFKADIWSLGITAIELAKGEPPNS---DLHPM-RVLFLIPK 230
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
++ P + H SK F V+ CL DP RP A+
Sbjct: 231 NS----PPTLEGQH-----SKPFKEFVEACLNKDPRFRPTAK 263
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 40/236 (16%)
Query: 9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR-PLNSPA 67
E++ + +E+ + L HPN I + + + C+ + D + ++ PL
Sbjct: 96 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE-- 153
Query: 68 ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------I 119
V+ A+ H L+GL+YL + H+++ AG+IL +
Sbjct: 154 ---------------VEIAAVTHG-ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGD 197
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDD-YYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
F + PEV+ D+ Y K D+W +GIT ++ R+
Sbjct: 198 FGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL------AERKP 251
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
L M M S +A NE + S+ F N V CL P RP +E
Sbjct: 252 PLFNMNAM------SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 301
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
+A KE LKGL YL E H++I A ++L + D DT+
Sbjct: 122 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNTF 180
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
PEV+ Y K+DIW +GITA++ G P S D+ M ++L PK
Sbjct: 181 VGTPFWMAPEVIQ--QSAYDSKADIWSLGITAIELAKGEPPNS---DMHPM-RVLFLIPK 234
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
+ N T G T K+F + CL DP+ RP A+
Sbjct: 235 N-------NPPTLVGDFT--KSFKEFIDACLNKDPSFRPTAK 267
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 107/277 (38%), Gaps = 78/277 (28%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E++ K +HPNI+P T I+ +L+ + S M Y +A LI
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIADNELWV---------VTSFMAYG-----SAKDLIC 118
Query: 74 SNRHRYGITVDCLAIAH--KETLKGLSYLQGEGLFHKNISAGHIL----HNIFNDDTRNX 127
++ + ++ LAIA+ + LK L Y+ G H+++ A HIL ++ R+
Sbjct: 119 TH---FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN 175
Query: 128 XXXXXXXXXXXX---------------XPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
PEV+ Y KSDI+ +GITA + G +
Sbjct: 176 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 235
Query: 173 PVSRRQDLDIMTKMLMKQPKST-------------SLQVAPNEDTTHGT----------- 208
P +D+ T+ML+++ T L ++P+ +
Sbjct: 236 PF---KDMP-ATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPR 291
Query: 209 ------------RTLSKNFWNMVKICLAPDPAKRPAA 233
RT S +F + V+ CL +P RP+A
Sbjct: 292 PSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA 328
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 107/277 (38%), Gaps = 78/277 (28%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E++ K +HPNI+P T I+ +L+ + S M Y +A LI
Sbjct: 57 LQGELHVSKLFNHPNIVPYRATFIADNELWV---------VTSFMAYG-----SAKDLIC 102
Query: 74 SNRHRYGITVDCLAIAH--KETLKGLSYLQGEGLFHKNISAGHIL----HNIFNDDTRNX 127
++ + ++ LAIA+ + LK L Y+ G H+++ A HIL ++ R+
Sbjct: 103 TH---FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN 159
Query: 128 XXXXXXXXXXXX---------------XPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
PEV+ Y KSDI+ +GITA + G +
Sbjct: 160 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 219
Query: 173 PVSRRQDLDIMTKMLMKQPKST-------------SLQVAPNEDTTHGT----------- 208
P +D+ T+ML+++ T L ++P+ +
Sbjct: 220 PF---KDMP-ATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPR 275
Query: 209 ------------RTLSKNFWNMVKICLAPDPAKRPAA 233
RT S +F + V+ CL +P RP+A
Sbjct: 276 PSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA 312
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 92/247 (37%), Gaps = 50/247 (20%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQR---QLFYAEIACMIGSLDSIMTYRPLNSPAATQ 70
L EI +KHL H NI+ Y S+ ++F ++ GSL +++
Sbjct: 52 LHEEIALHKHLKHKNIVQ-YLGSFSENGFIKIFMEQVPG--GSLSALL------------ 96
Query: 71 LIMSNRHRYGITVD---CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR-- 125
R ++G D + K+ L+GL YL + H++I ++L N ++ +
Sbjct: 97 -----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKIS 151
Query: 126 -----------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
N PE+++ G Y +DIW +G T ++ G P
Sbjct: 152 DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
+ +P++ +V + ++S + C PDP KR A
Sbjct: 212 YE-----------LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACAN 260
Query: 235 AQVLQEM 241
++ E
Sbjct: 261 DLLVDEF 267
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 95/256 (37%), Gaps = 48/256 (18%)
Query: 1 VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
VID + EE EI HPNI+ + + L+ C G++D++M
Sbjct: 69 VIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 61 --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
RPL I V C K+TL L+YL + H+++ AG+IL
Sbjct: 128 LERPLTESQ-------------IQVVC-----KQTLDALNYLHDNKIIHRDLKAGNILFT 169
Query: 119 IFND-----------DTRNXXXXXXXXXXXX-XXPEVV---NFGDDYYSCKSDIWLIGIT 163
+ D +TR PEVV D Y K+D+W +GIT
Sbjct: 170 LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
++ P + ++ K+ +P T S NF + +K CL
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPP-----------TLAQPSRWSSNFKDFLKKCL 278
Query: 224 APDPAKRPAAEAQVLQ 239
+ R +Q+LQ
Sbjct: 279 EKNVDARWTT-SQLLQ 293
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 92/247 (37%), Gaps = 50/247 (20%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQR---QLFYAEIACMIGSLDSIMTYRPLNSPAATQ 70
L EI +KHL H NI+ Y S+ ++F ++ GSL +++
Sbjct: 66 LHEEIALHKHLKHKNIVQ-YLGSFSENGFIKIFMEQVPG--GSLSALL------------ 110
Query: 71 LIMSNRHRYGITVD---CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR-- 125
R ++G D + K+ L+GL YL + H++I ++L N ++ +
Sbjct: 111 -----RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKIS 165
Query: 126 -----------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
N PE+++ G Y +DIW +G T ++ G P
Sbjct: 166 DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
+ +P++ +V + ++S + C PDP KR A
Sbjct: 226 YE-----------LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACAN 274
Query: 235 AQVLQEM 241
++ E
Sbjct: 275 DLLVDEF 281
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 96/257 (37%), Gaps = 49/257 (19%)
Query: 1 VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
VID + EE EI HPNI+ + + L+ C G++D++M
Sbjct: 42 VIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 100
Query: 61 --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
RPL I V C K+TL L+YL + H+++ AG+IL
Sbjct: 101 LERPLTESQ-------------IQVVC-----KQTLDALNYLHDNKIIHRDLKAGNILFT 142
Query: 119 IFND-----------DTRNXXXXXXXXXXXX--XXPEVV---NFGDDYYSCKSDIWLIGI 162
+ D +TR PEVV D Y K+D+W +GI
Sbjct: 143 LDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 202
Query: 163 TALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKIC 222
T ++ P + ++ K+ +P T S NF + +K C
Sbjct: 203 TLIEMAEIEPPHHELNPMRVLLKIAKSEPP-----------TLAQPSRWSSNFKDFLKKC 251
Query: 223 LAPDPAKRPAAEAQVLQ 239
L + R +Q+LQ
Sbjct: 252 LEKNVDARWTT-SQLLQ 267
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 95/256 (37%), Gaps = 48/256 (18%)
Query: 1 VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
VID + EE EI HPNI+ + + L+ C G++D++M
Sbjct: 69 VIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 61 --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
RPL I V C K+TL L+YL + H+++ AG+IL
Sbjct: 128 LERPLTESQ-------------IQVVC-----KQTLDALNYLHDNKIIHRDLKAGNILFT 169
Query: 119 IFND-----------DTRNXXXXXXXXXXXX-XXPEVV---NFGDDYYSCKSDIWLIGIT 163
+ D +TR PEVV D Y K+D+W +GIT
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
++ P + ++ K+ +P T S NF + +K CL
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPP-----------TLAQPSRWSSNFKDFLKKCL 278
Query: 224 APDPAKRPAAEAQVLQ 239
+ R +Q+LQ
Sbjct: 279 EKNVDARWTT-SQLLQ 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 96/256 (37%), Gaps = 48/256 (18%)
Query: 1 VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
VID + EE EI HPNI+ + + L+ C G++D++M
Sbjct: 69 VIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 127
Query: 61 --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
RPL I V C K+TL L+YL + H+++ AG+IL
Sbjct: 128 LERPLTESQ-------------IQVVC-----KQTLDALNYLHDNKIIHRDLKAGNILFT 169
Query: 119 IFND-----------DTRNXXXXXXXXXXXX-XXPEVV---NFGDDYYSCKSDIWLIGIT 163
+ D +TR PEVV D Y K+D+W +GIT
Sbjct: 170 LDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 164 ALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICL 223
++ P + ++ K+ +P T S NF + +K CL
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEPP-----------TLAQPSRWSSNFKDFLKKCL 278
Query: 224 APDPAKRPAAEAQVLQ 239
+ R +Q+LQ
Sbjct: 279 EKNVDARWTT-SQLLQ 293
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
+A +E LKGL YL E H++I A ++L + + DT+
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTF 164
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
PEV+ Y K+DIW +GITA++ G P S + K+L PK
Sbjct: 165 VGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLIPK 218
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
+ N T G SK V+ CL +P+ RP A+
Sbjct: 219 N-------NPPTLEG--NYSKPLKEFVEACLNKEPSFRPTAK 251
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
+A +E LKGL YL E H++I A ++L + + DT+
Sbjct: 126 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTF 184
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
PEV+ Y K+DIW +GITA++ G P S + K+L PK
Sbjct: 185 VGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLIPK 238
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
+ N T G SK V+ CL +P+ RP A+
Sbjct: 239 N-------NPPTLEG--NYSKPLKEFVEACLNKEPSFRPTAK 271
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 29/162 (17%)
Query: 86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
+A +E LKGL YL E H++I A ++L + + DT+
Sbjct: 121 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNXF 179
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
PEV+ Y K+DIW +GITA++ G P S + K+L PK
Sbjct: 180 VGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLIPK 233
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
+ N T G SK V+ CL +P+ RP A+
Sbjct: 234 N-------NPPTLEG--NYSKPLKEFVEACLNKEPSFRPTAK 266
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 29/162 (17%)
Query: 86 LAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFND-------------DTRNXXXXXX 132
+A +E LKGL YL E H++I A ++L + + DT+
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNXF 164
Query: 133 XXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPK 192
PEV+ Y K+DIW +GITA++ G P S + K+L PK
Sbjct: 165 VGTPFWMAPEVIK--QSAYDSKADIWSLGITAIELARGEPPHSELHPM----KVLFLIPK 218
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
+ N T G SK V+ CL +P+ RP A+
Sbjct: 219 N-------NPPTLEG--NYSKPLKEFVEACLNKEPSFRPTAK 251
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 89/247 (36%), Gaps = 48/247 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
++ EI K L HPNII I++ ++ C G L +++
Sbjct: 66 QIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL-------------LERIV 112
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILH--------------- 117
+ ++ +A K+ + L+Y + + HK++ +IL
Sbjct: 113 SAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFG 172
Query: 118 --NIFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVS 175
+F D + PEV F D + K DIW G+ G LP +
Sbjct: 173 LAELFKSDEHSTNAAGTALYMA---PEV--FKRDV-TFKCDIWSAGVVMYFLLTGCLPFT 226
Query: 176 RRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA 235
++ K K+P + R L+ +++K L DP +RP+A A
Sbjct: 227 GTSLEEVQQKATYKEP-----------NYAVECRPLTPQAVDLLKQMLTKDPERRPSA-A 274
Query: 236 QVLQEMW 242
QVL W
Sbjct: 275 QVLHHEW 281
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAA 68
EE EI HP I+ + +L+ C G++D+IM
Sbjct: 50 EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM---------- 99
Query: 69 TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------F 120
+ +R G+T + + ++ L+ L++L + + H+++ AG++L + F
Sbjct: 100 ---LELDR---GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADF 153
Query: 121 NDDTRNXXXXXXXXXXXXX----XPEVV---NFGDDYYSCKSDIWLIGITALQFPCGGLP 173
+N PEVV D Y K+DIW +GIT ++ P
Sbjct: 154 GVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
+ ++ K+ P + + P++ S F + +KI L +P RP+A
Sbjct: 214 HHELNPMRVLLKIAKSDPPTL---LTPSK--------WSVEFRDFLKIALDKNPETRPSA 262
Query: 234 EAQVLQ 239
AQ+L+
Sbjct: 263 -AQLLE 267
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAA 68
EE EI HP I+ + +L+ C G++D+IM
Sbjct: 58 EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM---------- 107
Query: 69 TQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------F 120
+ +R G+T + + ++ L+ L++L + + H+++ AG++L + F
Sbjct: 108 ---LELDR---GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADF 161
Query: 121 NDDTRNXXXXXXXXXXXXX----XPEVV---NFGDDYYSCKSDIWLIGITALQFPCGGLP 173
+N PEVV D Y K+DIW +GIT ++ P
Sbjct: 162 GVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
Query: 174 VSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAA 233
+ ++ K+ P + + P++ S F + +KI L +P RP+A
Sbjct: 222 HHELNPMRVLLKIAKSDPPTL---LTPSK--------WSVEFRDFLKIALDKNPETRPSA 270
Query: 234 EAQVLQ 239
AQ+L+
Sbjct: 271 -AQLLE 275
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 51/256 (19%)
Query: 1 VIDINHQAEEYAKLAREIYRYKHLSH-PNIIPIYKTMISQR------QLFYAEIACMIGS 53
V+D+ EE ++ +EI K SH NI Y I + QL+ C GS
Sbjct: 56 VMDVTGDEEE--EIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGS 113
Query: 54 LDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAG 113
+ ++ N+ + + +A +E L+GLS+L + H++I
Sbjct: 114 VTDLIKNTKGNT---------------LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQ 158
Query: 114 HILHNIFND------------DTRNXXXXXXXXXXXXXXPEVVNFG---DDYYSCKSDIW 158
++L + D PEV+ D Y KSD+W
Sbjct: 159 NVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLW 218
Query: 159 LIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNM 218
+GITA++ G P+ D+ M + + + N ++ SK F +
Sbjct: 219 SLGITAIEMAEGAPPLC---DMHPMRALFL---------IPRNPAPRLKSKKWSKKFQSF 266
Query: 219 VKICLAPDPAKRPAAE 234
++ CL + ++RPA E
Sbjct: 267 IESCLVKNHSQRPATE 282
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 151 YSCKSDIWLIGITALQFPCGGLPVSRRQDL-DIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y +SD+W +GIT + G P + + D +T+++ P Q++ +E+ R
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP----QLSNSEE-----R 256
Query: 210 TLSKNFWNMVKICLAPDPAKRP 231
S +F N V +CL D +KRP
Sbjct: 257 EFSPSFINFVNLCLTKDESKRP 278
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 151 YSCKSDIWLIGITALQFPCGGLPVSR-RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y ++D+W +GI+ ++ G P + D +++TK+L ++P + P G
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP-----PLLP------GHM 254
Query: 210 TLSKNFWNMVKICLAPDPAKRP 231
S +F + VK CL D KRP
Sbjct: 255 GFSGDFQSFVKDCLTKDHRKRP 276
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 45/216 (20%)
Query: 16 REIYRYKHLSHPNIIPIY---KTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
RE K L+H NI+ ++ + ++ ++ E C GSL Y L P+
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF-CPCGSL-----YTVLEEPS----- 104
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXX 132
+ YG+ I ++ + G+++L+ G+ H+NI G+I+ I D
Sbjct: 105 ----NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Query: 133 XXXXXXXXPE--VVNFG-DDY------------------YSCKSDIWLIGITALQFPCGG 171
E V +G ++Y Y D+W IG+T G
Sbjct: 161 GAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220
Query: 172 LPV----SRRQDLDIMTKMLMKQPKS--TSLQVAPN 201
LP R++ ++M K++ +P + +Q A N
Sbjct: 221 LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN 256
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 83/216 (38%), Gaps = 45/216 (20%)
Query: 16 REIYRYKHLSHPNIIPIY---KTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
RE K L+H NI+ ++ + ++ ++ E C GSL Y L P+
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF-CPCGSL-----YTVLEEPS----- 104
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
+ YG+ I ++ + G+++L+ G+ H+NI G+I+ I
Sbjct: 105 ----NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Query: 120 -----FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDY---YSCKSDIWLIGITALQFPCGG 171
DD + E D+ Y D+W IG+T G
Sbjct: 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220
Query: 172 LPV----SRRQDLDIMTKMLMKQPKS--TSLQVAPN 201
LP R++ ++M K++ +P + +Q A N
Sbjct: 221 LPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN 256
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 57 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 104
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
+Y + + L + + L+YL+ + H++I+A ++L +
Sbjct: 105 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 160 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 218 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 257
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 57 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 104
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
+Y + + L + + L+YL+ + H++I+A ++L +
Sbjct: 105 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 160 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 218 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 257
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 59 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 106
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
+Y + + L + + L+YL+ + H++I+A ++L +
Sbjct: 107 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 162 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 219
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 220 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 259
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 54 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 101
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
+Y + + L + + L+YL+ + H++I+A ++L +
Sbjct: 102 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 157 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 214
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 215 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 254
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 62 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 109
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
+Y + + L + + L+YL+ + H++I+A ++L +
Sbjct: 110 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 165 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 223 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 85 KFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVR----------- 132
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
+Y + + L + + L+YL+ + H++I+A ++L +
Sbjct: 133 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 188 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 245
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 246 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 285
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 60 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 107
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
+Y + + L + + L+YL+ + H++I+A ++L +
Sbjct: 108 -----KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 163 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 220
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 221 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 260
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 48/256 (18%)
Query: 3 DINHQAEEY-AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYR 61
D N E++ ++ EI K L HPNII ++ + ++ FY ++T
Sbjct: 81 DDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF-DVFEDKKYFY------------LVTEF 127
Query: 62 PLNSPAATQLIMSNRHRYGITVDC-LAIAHKETLKGLSYLQGEGLFHKNISAGHIL---- 116
Q+I NRH++ +C A K+ L G+ YL + H++I +IL
Sbjct: 128 YEGGELFEQII--NRHKFD---ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENK 182
Query: 117 HNIFNDD----------TRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ 166
+++ N +++ PEV+ Y+ K D+W G+
Sbjct: 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK---KKYNEKCDVWSCGVIMYI 239
Query: 167 FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPD 226
CG P + D DI+ K ++ + + +S ++K+ L D
Sbjct: 240 LLCGYPPFGGQNDQDIIKK----------VEKGKYYFDFNDWKNISDEAKELIKLMLTYD 289
Query: 227 PAKRPAAEAQVLQEMW 242
KR AE + L W
Sbjct: 290 YNKRCTAE-EALNSRW 304
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 93/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 57 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 104
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
++ + + L + + L+YL+ + H++I+A ++L +
Sbjct: 105 -----KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 160 YMEDSTXXKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 218 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 257
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 57 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 104
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
++ + + L + + L+YL+ + H++I+A ++L +
Sbjct: 105 -----KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 159
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 160 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 218 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 257
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 437 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 484
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
++ + + L + + L+YL+ + H++I+A ++L +
Sbjct: 485 -----KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSR 539
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 540 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 598 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 637
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 88/247 (35%), Gaps = 49/247 (19%)
Query: 12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGS--LDSIMTYRPLNSPAAT 69
+KL E+ K L HPNI+ +Y +R +Y + C G D I+ N A
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKLYDFFEDKRN-YYLVMECYKGGELFDEIIHRMKFNEVDAA 139
Query: 70 QLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT----- 124
+I K+ L G++YL + H+++ ++L D
Sbjct: 140 VII------------------KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIV 181
Query: 125 ---------RNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVS 175
PEV+ Y K D+W IG+ G P
Sbjct: 182 DFGLSAVFENQKKMKERLGTAYYIAPEVLR---KKYDEKCDVWSIGVILFILLAGYPPFG 238
Query: 176 RRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEA 235
+ D +I+ K+ + + ++ + G + +++K L D +R +A+
Sbjct: 239 GQTDQEILRKV---EKGKYTFDSPEWKNVSEGAK-------DLIKQMLQFDSQRRISAQ- 287
Query: 236 QVLQEMW 242
Q L+ W
Sbjct: 288 QALEHPW 294
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
K +E + HP+I+ + +I++ ++ C +G L S + R
Sbjct: 437 KFLQEALTMRQFDHPHIVKLI-GVITENPVWIIMELCTLGELRSFLQVR----------- 484
Query: 73 MSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI------------- 119
++ + + L + + L+YL+ + H++I+A ++L +
Sbjct: 485 -----KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL-PVSRRQ 178
+ +D+ PE +NF ++ SD+W+ G+ + G+ P +
Sbjct: 540 YMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
+ D++ ++ L + PN T ++++ C A DP++RP
Sbjct: 598 NNDVIGRI----ENGERLPMPPNCPPT---------LYSLMTKCWAYDPSRRP 637
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 53/227 (23%)
Query: 24 LSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY 79
LSHP ++ +Y + Q + + E C+ D + T R L + A T L M
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS---DYLRTQRGLFA-AETLLGM------ 108
Query: 80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-------------HNIFNDDTRN 126
CL + +G++YL+ + H++++A + L F D +
Sbjct: 109 -----CLDVC-----EGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158
Query: 127 XXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMTK 185
PEV +F YS KSD+W G+ + F G +P R + +++
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSR--YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 216
Query: 186 MLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
+ ST ++ + R S + + ++ C P RPA
Sbjct: 217 I------STGFRL-------YKPRLASTHVYQIMNHCWKERPEDRPA 250
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 84/243 (34%), Gaps = 45/243 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ K L HPNI+ +Y+ +R + G L + R S +IM
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 127
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR-------- 125
K+ L G +YL + H+++ ++L + D
Sbjct: 128 -----------------KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGL 170
Query: 126 ------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD 179
PEV+ Y K D+W G+ CG P + D
Sbjct: 171 SAHFEVGGKMKERLGTAYYIAPEVLR---KKYDEKCDVWSCGVILYILLCGYPPFGGQTD 227
Query: 180 LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
+I +K+ + P + T +S +VK+ L +P+KR +AE + L
Sbjct: 228 QEI-----LKRVEKGKFSFDPPDWT-----QVSDEAKQLVKLMLTYEPSKRISAE-EALN 276
Query: 240 EMW 242
W
Sbjct: 277 HPW 279
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 53/227 (23%)
Query: 24 LSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY 79
LSHP ++ +Y + Q + + E C+ D + T R L + A T L M
Sbjct: 57 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS---DYLRTQRGLFA-AETLLGM------ 106
Query: 80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-------------HNIFNDDTRN 126
CL + +G++YL+ + H++++A + L F D +
Sbjct: 107 -----CLDVC-----EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 156
Query: 127 XXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMTK 185
PEV +F YS KSD+W G+ + F G +P R + +++
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSR--YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 214
Query: 186 MLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
+ ST ++ + R S + + ++ C P RPA
Sbjct: 215 I------STGFRL-------YKPRLASTHVYQIMNHCWKERPEDRPA 248
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 81/235 (34%), Gaps = 44/235 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ K L HPNI+ +Y+ +R + G L + R S +IM
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 110
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR-------- 125
K+ L G +YL + H+++ ++L + D
Sbjct: 111 -----------------KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGL 153
Query: 126 ------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD 179
PEV+ Y K D+W G+ CG P + D
Sbjct: 154 SAHFEVGGKMKERLGTAYYIAPEVLR---KKYDEKCDVWSCGVILYILLCGYPPFGGQTD 210
Query: 180 LDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
+I +K+ + P + T +S +VK+ L +P+KR +AE
Sbjct: 211 QEI-----LKRVEKGKFSFDPPDWT-----QVSDEAKQLVKLMLTYEPSKRISAE 255
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 53/227 (23%)
Query: 24 LSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY 79
LSHP ++ +Y + Q + + E C+ D + T R L + A T L M
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS---DYLRTQRGLFA-AETLLGM------ 108
Query: 80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-------------HNIFNDDTRN 126
CL + +G++YL+ + H++++A + L F D +
Sbjct: 109 -----CLDVC-----EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 158
Query: 127 XXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMTK 185
PEV +F YS KSD+W G+ + F G +P R + +++
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSR--YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 216
Query: 186 MLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
+ ST ++ + R S + + ++ C P RPA
Sbjct: 217 I------STGFRL-------YKPRLASTHVYQIMNHCWKERPEDRPA 250
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 65/181 (35%), Gaps = 38/181 (20%)
Query: 12 AKLAREIYRYKHLSHPNIIPIYKTMISQ-RQLFYAEIACMIGSLDSIMTYRPLNSPAATQ 70
A + +EI + L H N+I + + ++ +Q Y + + + + L+S +
Sbjct: 51 ANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEM-----LDSVPEKR 105
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI--------------- 115
+ H Y + + GL YL +G+ HK+I G++
Sbjct: 106 FPVCQAHGY----------FCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV 155
Query: 116 ---LHNIFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGL 172
LH DDT PE+ N D + K DIW G+T G
Sbjct: 156 AEALHPFAADDT----CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLY 211
Query: 173 P 173
P
Sbjct: 212 P 212
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 53/227 (23%)
Query: 24 LSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY 79
LSHP ++ +Y + Q + + E C+ D + T R L + A T L M
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS---DYLRTQRGLFA-AETLLGM------ 109
Query: 80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-------------HNIFNDDTRN 126
CL + +G++YL+ + H++++A + L F D +
Sbjct: 110 -----CLDVC-----EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159
Query: 127 XXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMTK 185
PEV +F YS KSD+W G+ + F G +P R + +++
Sbjct: 160 TSSTGTKFPVKWASPEVFSFSR--YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 217
Query: 186 MLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
+ ST ++ + R S + + ++ C P RPA
Sbjct: 218 I------STGFRL-------YKPRLASTHVYQIMNHCWRERPEDRPA 251
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 31/170 (18%)
Query: 36 MISQRQLFYAEIACMIG-----SLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH 90
M++ L +A I ++G SL + Y PL S L +HR + L
Sbjct: 84 MLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGS----LLDHVRQHRGALGPQLLLNWG 139
Query: 91 KETLKGLSYLQGEGLFHKNISAGHIL--------------HNIFNDDTRNXXXXXXXXXX 136
+ KG+ YL+ G+ H+N++A ++L ++ D +
Sbjct: 140 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 137 XXXXPEVVNFGDDYYSCKSDIWLIGITALQF------PCGGLPVSRRQDL 180
E ++FG Y+ +SD+W G+T + P GL ++ DL
Sbjct: 200 KWMALESIHFGK--YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL 247
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 53/227 (23%)
Query: 24 LSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY 79
LSHP ++ +Y + Q + + E C+ D + T R L + A T L M
Sbjct: 62 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS---DYLRTQRGLFA-AETLLGM------ 111
Query: 80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-------------HNIFNDDTRN 126
CL + +G++YL+ + H++++A + L F D +
Sbjct: 112 -----CLDVC-----EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161
Query: 127 XXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMTK 185
PEV +F YS KSD+W G+ + F G +P R + +++
Sbjct: 162 TSSTGTKFPVKWASPEVFSFSR--YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 219
Query: 186 MLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
+ ST ++ + R S + + ++ C P RPA
Sbjct: 220 I------STGFRL-------YKPRLASTHVYQIMNHCWRERPEDRPA 253
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 53/227 (23%)
Query: 24 LSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRY 79
LSHP ++ +Y + Q + + E C+ D + T R L + A T L M
Sbjct: 79 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS---DYLRTQRGLFA-AETLLGM------ 128
Query: 80 GITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-------------HNIFNDDTRN 126
CL + +G++YL+ + H++++A + L F D +
Sbjct: 129 -----CLDVC-----EGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 178
Query: 127 XXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMTK 185
PEV +F YS KSD+W G+ + F G +P R + +++
Sbjct: 179 TSSTGTKFPVKWASPEVFSF--SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED 236
Query: 186 MLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
+ ST ++ + R S + + ++ C P RPA
Sbjct: 237 I------STGFRL-------YKPRLASTHVYQIMNHCWKERPEDRPA 270
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 31/170 (18%)
Query: 36 MISQRQLFYAEIACMIG-----SLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAH 90
M++ L +A I ++G SL + Y PL S L +HR + L
Sbjct: 66 MLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGS----LLDHVRQHRGALGPQLLLNWG 121
Query: 91 KETLKGLSYLQGEGLFHKNISAGHIL--------------HNIFNDDTRNXXXXXXXXXX 136
+ KG+ YL+ G+ H+N++A ++L ++ D +
Sbjct: 122 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 137 XXXXPEVVNFGDDYYSCKSDIWLIGITALQF------PCGGLPVSRRQDL 180
E ++FG Y+ +SD+W G+T + P GL ++ DL
Sbjct: 182 KWMALESIHFGK--YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL 229
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/200 (16%), Positives = 76/200 (38%), Gaps = 31/200 (15%)
Query: 1 VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
++D N + ++ EI K+L H +I +Y + + ++F C G L +
Sbjct: 42 IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIIS 101
Query: 61 RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
+ S T+++ ++ + ++Y+ +G H+++ ++L + +
Sbjct: 102 QDRLSEEETRVVF-----------------RQIVSAVAYVHSQGYAHRDLKPENLLFDEY 144
Query: 121 ND-------------DTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQF 167
+ ++ PE++ G Y ++D+W +GI
Sbjct: 145 HKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQ-GKSYLGSEADVWSMGILLYVL 203
Query: 168 PCGGLPVSRRQDLDIMTKML 187
CG LP + + K++
Sbjct: 204 MCGFLPFDDDNVMALYKKIM 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 24/118 (20%)
Query: 7 QAEEYAKLA-REIYRYKHLSHPNIIPIYKTMISQRQL-----FYAEIACMIGSLDSIMTY 60
Q+E +AK A RE+ KH+ H N+I + L FY + M L +M +
Sbjct: 63 QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH 122
Query: 61 RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
L D + + LKGL Y+ G+ H+++ G++ N
Sbjct: 123 EKLGE------------------DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN 162
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 39/242 (16%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQ-LFYAEIACMIGSLDSIMTYRPLNSPAATQL 71
++ RE+ + + HPNII ++ ++ + E+ D + L ATQ
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 113
Query: 72 ---IMSNRH--------RYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
I+ H + + + + + K L G+ HK I AG+ NIF
Sbjct: 114 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK-IEAGNEFKNIF 172
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
PE+VN+ + ++D+W IG+ G P
Sbjct: 173 G-------------TPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGETKQ 217
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ +T + +++ +E+ T L+K+F ++ L DP +R AQ L+
Sbjct: 218 ETLTNI-------SAVNYDFDEEYFSNTSELAKDF---IRRLLVKDPKRRMTI-AQSLEH 266
Query: 241 MW 242
W
Sbjct: 267 SW 268
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 86/236 (36%), Gaps = 49/236 (20%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ + H N++ +Y + + +L+ G+L I+T+ +N
Sbjct: 89 LFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------ 142
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXXX 133
I CL++ L+ LSYL +G+ H++I + IL D R
Sbjct: 143 -------IATVCLSV-----LRALSYLHNQGVIHRDIKSDSIL---LTSDGRIKLSDFGF 187
Query: 134 XXXXX---------------XXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
PEV++ Y + DIW +GI ++ G P
Sbjct: 188 CAQVSKEVPKRKXLVGTPYWMAPEVISRLP--YGTEVDIWSLGIMVIEMIDGEPPYFNEP 245
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
L M ++ P P H ++ + F +++ L +P++R A+
Sbjct: 246 PLQAMRRIRDSLP--------PRVKDLHKVSSVLRGFLDLM---LVREPSQRATAQ 290
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 39/242 (16%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQ-LFYAEIACMIGSLDSIMTYRPLNSPAATQL 71
++ RE+ + + HPNII ++ ++ + E+ D + L ATQ
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 120
Query: 72 ---IMSNRH--------RYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
I+ H + + + + + K L G+ HK I AG+ NIF
Sbjct: 121 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK-IEAGNEFKNIF 179
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
PE+VN+ + ++D+W IG+ G P
Sbjct: 180 G-------------TPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGETKQ 224
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ +T + +++ +E+ T L+K+F ++ L DP +R AQ L+
Sbjct: 225 ETLTNI-------SAVNYDFDEEYFSNTSELAKDF---IRRLLVKDPKRRMXI-AQSLEH 273
Query: 241 MW 242
W
Sbjct: 274 SW 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 39/242 (16%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQ-LFYAEIACMIGSLDSIMTYRPLNSPAATQL 71
++ RE+ + + HPNII ++ ++ + E+ D + L ATQ
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 134
Query: 72 ---IMSNRH--------RYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIF 120
I+ H + + + + + K L G+ HK I AG+ NIF
Sbjct: 135 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK-IEAGNEFKNIF 193
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
PE+VN+ + ++D+W IG+ G P
Sbjct: 194 G-------------TPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGETKQ 238
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ +T + +++ +E+ T L+K+F ++ L DP +R AQ L+
Sbjct: 239 ETLTNI-------SAVNYDFDEEYFSNTSELAKDF---IRRLLVKDPKRRMXI-AQSLEH 287
Query: 241 MW 242
W
Sbjct: 288 SW 289
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 21/93 (22%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y++ + +W +GI CG +P R Q++ E H
Sbjct: 215 YHALPATVWSLGILLYDMVCGDIPFERDQEI--------------------LEAELHFPA 254
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
+S + +++ CLAP P+ RP+ E ++L + W
Sbjct: 255 HVSPDCCALIRRCLAPKPSSRPSLE-EILLDPW 286
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 85/236 (36%), Gaps = 49/236 (20%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ + H N++ +YK+ + +L+ G+L I++ LN
Sbjct: 89 LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQ------ 142
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXXX 133
I C A+ L+ L+YL +G+ H++I + IL + D R
Sbjct: 143 -------IATVCEAV-----LQALAYLHAQGVIHRDIKSDSILLTL---DGRVKLSDFGF 187
Query: 134 XXXXX---------------XXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQ 178
PEV++ Y+ + DIW +GI ++ G P
Sbjct: 188 CAQISKDVPKRKXLVGTPYWMAPEVIS--RSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245
Query: 179 DLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAE 234
+ M ++ P P +H + ++F + L DP +R A+
Sbjct: 246 PVQAMKRLRDSPP--------PKLKNSHKVSPVLRDFLERM---LVRDPQERATAQ 290
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
D+ Q E RE+ L H N+I +Y +++ E+A + LD + ++
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ- 105
Query: 63 LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
++ RY + V +G+ YL+ + H++++A ++L
Sbjct: 106 ------GHFLLGTLSRYAVQV----------AEGMGYLESKRFIHRDLAARNLL 143
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
D+ Q E RE+ L H N+I +Y +++ E+A + LD + ++
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ- 109
Query: 63 LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
++ RY + V +G+ YL+ + H++++A ++L
Sbjct: 110 ------GHFLLGTLSRYAVQV----------AEGMGYLESKRFIHRDLAARNLL 147
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
D+ Q E RE+ L H N+I +Y +++ E+A + LD + ++
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ- 105
Query: 63 LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
++ RY + V +G+ YL+ + H++++A ++L
Sbjct: 106 ------GHFLLGTLSRYAVQV----------AEGMGYLESKRFIHRDLAARNLL 143
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
D+ Q E RE+ L H N+I +Y +++ E+A + LD + ++
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ- 115
Query: 63 LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
++ RY + V +G+ YL+ + H++++A ++L
Sbjct: 116 ------GHFLLGTLSRYAVQV----------AEGMGYLESKRFIHRDLAARNLL 153
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
D+ Q E RE+ L H N+I +Y +++ E+A + LD + ++
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ- 115
Query: 63 LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
++ RY + V +G+ YL+ + H++++A ++L
Sbjct: 116 ------GHFLLGTLSRYAVQV----------AEGMGYLESKRFIHRDLAARNLL 153
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
D+ Q E RE+ L H N+I +Y +++ E+A + LD + ++
Sbjct: 47 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ- 105
Query: 63 LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
++ RY + V +G+ YL+ + H++++A ++L
Sbjct: 106 ------GHFLLGTLSRYAVQV----------AEGMGYLESKRFIHRDLAARNLL 143
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 3 DINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRP 62
D+ Q E RE+ L H N+I +Y +++ E+A + LD + ++
Sbjct: 51 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ- 109
Query: 63 LNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
++ RY + V +G+ YL+ + H++++A ++L
Sbjct: 110 ------GHFLLGTLSRYAVQV----------AEGMGYLESKRFIHRDLAARNLL 147
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 41/192 (21%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAAT 69
+ RE L HP + +Y T +L+ YA+ C++ + I ++
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE------- 131
Query: 70 QLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN----------- 118
C E + L YL G+G+ H+++ +IL N
Sbjct: 132 --------------TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFG 177
Query: 119 ---IFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVS 175
+ + +++ PE++ + S SD+W +G Q G P
Sbjct: 178 TAKVLSPESKQARANSFVGTAQYVSPELLT--EKSASKSSDLWALGCIIYQLVAGLPPFR 235
Query: 176 RRQDLDIMTKML 187
+ I K++
Sbjct: 236 AGNEYLIFQKII 247
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 73/204 (35%), Gaps = 17/204 (8%)
Query: 8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA 67
E+ + +EI K L HPNII +Y+T ++ C G L + ++ + +
Sbjct: 47 VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES 106
Query: 68 ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-FNDDTR- 125
IM + L +AH++ L+ E S L I F R
Sbjct: 107 DAARIMKDVLSAVAYCHKLNVAHRD-------LKPENFLFLTDSPDSPLKLIDFGLAARF 159
Query: 126 --NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIM 183
P+V+ + Y + D W G+ CG P S D ++M
Sbjct: 160 KPGKMMRTKVGTPYYVSPQVL---EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 216
Query: 184 TKM---LMKQPKSTSLQVAPNEDT 204
K+ P+ L V+P ++
Sbjct: 217 LKIREGTFTFPEKDWLNVSPQAES 240
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 38/196 (19%)
Query: 7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGS--LDSIMTYRPLN 64
Q + L RE+ K L HPNI+ +Y+ + FY G D I++ + +
Sbjct: 72 QKTDKESLLREVQLLKQLDHPNIMKLYE-FFEDKGYFYLVGEVYTGGELFDEIISRKRFS 130
Query: 65 SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT 124
A ++I ++ L G++Y+ + H+++ ++L + D
Sbjct: 131 EVDAARII------------------RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA 172
Query: 125 R--------------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
+ PEV++ Y K D+W G+ G
Sbjct: 173 NIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 229
Query: 171 GLPVSRRQDLDIMTKM 186
P + + DI+ K+
Sbjct: 230 CPPFNGANEYDILKKV 245
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 38/196 (19%)
Query: 7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGS--LDSIMTYRPLN 64
Q + L RE+ K L HPNI+ +Y+ + FY G D I++ + +
Sbjct: 66 QKTDKESLLREVQLLKQLDHPNIMKLYE-FFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124
Query: 65 SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT 124
A ++I ++ L G++Y+ + H+++ ++L + D
Sbjct: 125 EVDAARII------------------RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA 166
Query: 125 R--------------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
+ PEV++ Y K D+W G+ G
Sbjct: 167 NIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 223
Query: 171 GLPVSRRQDLDIMTKM 186
P + + DI+ K+
Sbjct: 224 CPPFNGANEYDILKKV 239
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 38/196 (19%)
Query: 7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGS--LDSIMTYRPLN 64
Q + L RE+ K L HPNI+ +Y+ + FY G D I++ + +
Sbjct: 90 QKTDKESLLREVQLLKQLDHPNIMKLYE-FFEDKGYFYLVGEVYTGGELFDEIISRKRFS 148
Query: 65 SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT 124
A ++I ++ L G++Y+ + H+++ ++L + D
Sbjct: 149 EVDAARII------------------RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA 190
Query: 125 R--------------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
+ PEV++ Y K D+W G+ G
Sbjct: 191 NIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 247
Query: 171 GLPVSRRQDLDIMTKM 186
P + + DI+ K+
Sbjct: 248 CPPFNGANEYDILKKV 263
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 73/204 (35%), Gaps = 17/204 (8%)
Query: 8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA 67
E+ + +EI K L HPNII +Y+T ++ C G L + ++ + +
Sbjct: 64 VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES 123
Query: 68 ATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI-FNDDTR- 125
IM + L +AH++ L+ E S L I F R
Sbjct: 124 DAARIMKDVLSAVAYCHKLNVAHRD-------LKPENFLFLTDSPDSPLKLIDFGLAARF 176
Query: 126 --NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIM 183
P+V+ + Y + D W G+ CG P S D ++M
Sbjct: 177 KPGKMMRTKVGTPYYVSPQVL---EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 233
Query: 184 TKM---LMKQPKSTSLQVAPNEDT 204
K+ P+ L V+P ++
Sbjct: 234 LKIREGTFTFPEKDWLNVSPQAES 257
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 38/196 (19%)
Query: 7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGS--LDSIMTYRPLN 64
Q + L RE+ K L HPNI+ +Y+ + FY G D I++ + +
Sbjct: 89 QKTDKESLLREVQLLKQLDHPNIMKLYE-FFEDKGYFYLVGEVYTGGELFDEIISRKRFS 147
Query: 65 SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT 124
A ++I ++ L G++Y+ + H+++ ++L + D
Sbjct: 148 EVDAARII------------------RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDA 189
Query: 125 R--------------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
+ PEV++ Y K D+W G+ G
Sbjct: 190 NIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 246
Query: 171 GLPVSRRQDLDIMTKM 186
P + + DI+ K+
Sbjct: 247 CPPFNGANEYDILKKV 262
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 35/189 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 122
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 123 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 182
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q G P
Sbjct: 183 LSPESKQARANSFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
Query: 179 DLDIMTKML 187
+ I K++
Sbjct: 240 EYLIFQKII 248
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 36/181 (19%)
Query: 24 LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV 83
L HP + +Y T +L++ L+ +L+ R
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLKYIRKIGSFDE 108
Query: 84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------IFNDDTRNXXX 129
C E + L YL G+G+ H+++ +IL N + + +++
Sbjct: 109 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 168
Query: 130 XXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLM 188
PE++ + +CK SD+W +G Q GLP R + ++ + ++
Sbjct: 169 NXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQL-VAGLPPFRAGNEYLIFQKII 224
Query: 189 K 189
K
Sbjct: 225 K 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 36/181 (19%)
Query: 24 LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV 83
L HP + +Y T +L++ L+ +L+ R
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLKYIRKIGSFDE 109
Query: 84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------IFNDDTRNXXX 129
C E + L YL G+G+ H+++ +IL N + + +++
Sbjct: 110 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 169
Query: 130 XXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLM 188
PE++ + +CK SD+W +G Q GLP R + ++ + ++
Sbjct: 170 NXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQL-VAGLPPFRAGNEYLIFQKII 225
Query: 189 K 189
K
Sbjct: 226 K 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 36/191 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 121
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q GLP R
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQL-VAGLPPFRAG 237
Query: 179 DLDIMTKMLMK 189
+ ++ ++K
Sbjct: 238 NEGLIFAKIIK 248
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 35/189 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 119
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q G P
Sbjct: 180 LSPESKQARANAFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 179 DLDIMTKML 187
+ I K++
Sbjct: 237 EYLIFQKII 245
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 35/179 (19%)
Query: 24 LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV 83
L HP + +Y T +L++ L+ +L+ R
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLKYIRKIGSFDE 128
Query: 84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------IFNDDTRNXXX 129
C E + L YL G+G+ H+++ +IL N + + +++
Sbjct: 129 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 188
Query: 130 XXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQDLDIMTKML 187
PE++ + +CK SD+W +G Q G P + I K++
Sbjct: 189 NSFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 35/189 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 119
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q G P
Sbjct: 180 LSPESKQARANXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 179 DLDIMTKML 187
+ I K++
Sbjct: 237 EYLIFQKII 245
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 35/179 (19%)
Query: 24 LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV 83
L HP + +Y T +L++ L+ +L+ R
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLKYIRKIGSFDE 106
Query: 84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------IFNDDTRNXXX 129
C E + L YL G+G+ H+++ +IL N + + +++
Sbjct: 107 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 166
Query: 130 XXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQDLDIMTKML 187
PE++ + +CK SD+W +G Q G P + I K++
Sbjct: 167 NXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 35/189 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 119
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q G P
Sbjct: 180 LSPESKQARANXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 179 DLDIMTKML 187
+ I K++
Sbjct: 237 EYLIFQKII 245
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 35/179 (19%)
Query: 24 LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV 83
L HP + +Y T +L++ L+ +L+ R
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLKYIRKIGSFDE 107
Query: 84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------IFNDDTRNXXX 129
C E + L YL G+G+ H+++ +IL N + + +++
Sbjct: 108 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 167
Query: 130 XXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQDLDIMTKML 187
PE++ + +CK SD+W +G Q G P + I K++
Sbjct: 168 NXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 35/189 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 77 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 119
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 120 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q G P
Sbjct: 180 LSPESKQARANXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 179 DLDIMTKML 187
+ I K++
Sbjct: 237 EYLIFQKII 245
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 40/172 (23%)
Query: 23 HLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR 78
+LSH ++ +Y QR +F Y C++ L + RHR
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM------------------RHR 116
Query: 79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-------------IFNDDTR 125
+ T L + K+ + + YL+ + H++++A + L N + D
Sbjct: 117 FQ-TQQLLEMC-KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
Query: 126 NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSR 176
PEV+ + +S KSDIW G+ + + G +P R
Sbjct: 175 ETSSVGSKFPVRWSPPEVLMYSK--FSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 35/189 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 80 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 122
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 123 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 182
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q G P
Sbjct: 183 LSPESKQARANXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
Query: 179 DLDIMTKML 187
+ I K++
Sbjct: 240 EYLIFQKII 248
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 35/189 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 121
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q G P
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 179 DLDIMTKML 187
+ I K++
Sbjct: 239 EYLIFQKII 247
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 35/189 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 121
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q G P
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 179 DLDIMTKML 187
+ I K++
Sbjct: 239 EYLIFQKII 247
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 70/191 (36%), Gaps = 36/191 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 82 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 124
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 125 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 184
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q GLP R
Sbjct: 185 LSPESKQARANXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQL-VAGLPPFRAG 240
Query: 179 DLDIMTKMLMK 189
+ ++ + ++K
Sbjct: 241 NEYLIFQKIIK 251
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 35/189 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 121
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQ 178
+ +++ PE++ + +CK SD+W +G Q G P
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 179 DLDIMTKML 187
+ I K++
Sbjct: 239 EYLIFQKII 247
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 35/179 (19%)
Query: 24 LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV 83
L HP + +Y T +L++ L+ +L+ R
Sbjct: 71 LDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLKYIRKIGSFDE 113
Query: 84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------IFNDDTRNXXX 129
C E + L YL G+G+ H+++ +IL N + + +++
Sbjct: 114 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 173
Query: 130 XXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQDLDIMTKML 187
PE++ + +CK SD+W +G Q G P + I K++
Sbjct: 174 NXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 35/179 (19%)
Query: 24 LSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITV 83
L HP + +Y T +L++ L+ +L+ R
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLKYIRKIGSFDE 128
Query: 84 DCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------IFNDDTRNXXX 129
C E + L YL G+G+ H+++ +IL N + + +++
Sbjct: 129 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 188
Query: 130 XXXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQDLDIMTKML 187
PE++ + +CK SD+W +G Q G P + I K++
Sbjct: 189 NXFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 29/130 (22%)
Query: 1 VIDINHQAEEYAK-LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACM----IGSLD 55
+IDI E+ K RE+ Y+ H N++ LF ACM + +
Sbjct: 62 LIDIERDNEDQLKAFKREVMAYRQTRHENVV-----------LFMG--ACMSPPHLAIIT 108
Query: 56 SIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI 115
S+ R L S I+ + V+ +E +KG+ YL +G+ HK++ +
Sbjct: 109 SLCKGRTLYSVVRDAKIV-------LDVNKTRQIAQEIVKGMGYLHAKGILHKDLKS--- 158
Query: 116 LHNIFNDDTR 125
N+F D+ +
Sbjct: 159 -KNVFYDNGK 167
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 44/174 (25%)
Query: 23 HLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR 78
+LSH ++ +Y QR +F Y C++ L + RHR
Sbjct: 55 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM------------------RHR 96
Query: 79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN---------------IFNDD 123
+ T L + K+ + + YL+ + H++++A + L N + +D+
Sbjct: 97 FQ-TQQLLEMC-KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154
Query: 124 TRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSR 176
+ PEV+ + +S KSDIW G+ + + G +P R
Sbjct: 155 YTS--SVGSKFPVRWSPPEVLMYSK--FSSKSDIWAFGVLMWEIYSLGKMPYER 204
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 46/242 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + + A
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA--- 115
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ V + H++ + H+++ A ++L
Sbjct: 116 ----RAKFRQIVSAVQYCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFS 160
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
N+ T PE+ G Y + D+W +G+ G LP Q+L
Sbjct: 161 NEFTFGNKLDEFCGSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ + +++ +S + N++K L +P+KR E Q++++
Sbjct: 219 KELRERVLRGKYRIPF-------------YMSTDCENLLKKFLILNPSKRGTLE-QIMKD 264
Query: 241 MW 242
W
Sbjct: 265 RW 266
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 46/242 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + + A
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA--- 115
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ V + H++ + H+++ A ++L
Sbjct: 116 ----RAKFRQIVSAVQYCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFS 160
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
N+ T PE+ G Y + D+W +G+ G LP Q+L
Sbjct: 161 NEFTFGNKLDTFCGSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ + +++ +S + N++K L +P+KR E Q++++
Sbjct: 219 KELRERVLRGKYRIPF-------------YMSTDCENLLKKFLILNPSKRGTLE-QIMKD 264
Query: 241 MW 242
W
Sbjct: 265 RW 266
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 46/242 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + + A
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA--- 115
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ V + H++ + H+++ A ++L
Sbjct: 116 ----RAKFRQIVSAVQYCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFS 160
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
N+ T PE+ G Y + D+W +G+ G LP Q+L
Sbjct: 161 NEFTFGNKLDAFCGAPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ + +++ +S + N++K L +P+KR E Q++++
Sbjct: 219 KELRERVLRGKYRIPF-------------YMSTDCENLLKKFLILNPSKRGTLE-QIMKD 264
Query: 241 MW 242
W
Sbjct: 265 RW 266
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 46/242 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + + A
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA--- 115
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ V + H++ + H+++ A ++L
Sbjct: 116 ----RAKFRQIVSAVQYCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFS 160
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
N+ T PE+ G Y + D+W +G+ G LP Q+L
Sbjct: 161 NEFTFGNKLDTFCGSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ + +++ +S + N++K L +P+KR E Q++++
Sbjct: 219 KELRERVLRGKYRIPF-------------YMSTDCENLLKKFLILNPSKRGTLE-QIMKD 264
Query: 241 MW 242
W
Sbjct: 265 RW 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 93/242 (38%), Gaps = 46/242 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + + A
Sbjct: 59 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA--- 115
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ V + H++ + H+++ A ++L
Sbjct: 116 ----RAKFRQIVSAVQYCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFS 160
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
N+ T PE+ G Y + D+W +G+ G LP Q+L
Sbjct: 161 NEFTFGNKLDTFCGSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ + +++ +S + N++K L +P+KR E Q++++
Sbjct: 219 KELRERVLRGKYRIPF-------------YMSTDCENLLKKFLILNPSKRGTLE-QIMKD 264
Query: 241 MW 242
W
Sbjct: 265 RW 266
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 44/174 (25%)
Query: 23 HLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR 78
+LSH ++ +Y QR +F Y C++ L + RHR
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM------------------RHR 100
Query: 79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN---------------IFNDD 123
+ T L + K+ + + YL+ + H++++A + L N + +D+
Sbjct: 101 FQ-TQQLLEMC-KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 158
Query: 124 TRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSR 176
+ PEV+ + +S KSDIW G+ + + G +P R
Sbjct: 159 YTS--SVGSKFPVRWSPPEVLMYSK--FSSKSDIWAFGVLMWEIYSLGKMPYER 208
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 44/174 (25%)
Query: 23 HLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR 78
+LSH ++ +Y QR +F Y C++ L + RHR
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM------------------RHR 101
Query: 79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN---------------IFNDD 123
+ T L + K+ + + YL+ + H++++A + L N + +D+
Sbjct: 102 FQ-TQQLLEMC-KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
Query: 124 TRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSR 176
+ PEV+ + +S KSDIW G+ + + G +P R
Sbjct: 160 YTS--SVGSKFPVRWSPPEVLMYSK--FSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 44/174 (25%)
Query: 23 HLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR 78
+LSH ++ +Y QR +F Y C++ L + RHR
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM------------------RHR 101
Query: 79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN---------------IFNDD 123
+ T L + K+ + + YL+ + H++++A + L N + +D+
Sbjct: 102 FQ-TQQLLEMC-KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
Query: 124 TRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSR 176
+ PEV+ + +S KSDIW G+ + + G +P R
Sbjct: 160 YTS--SRGSKFPVRWSPPEVLMYSK--FSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 44/174 (25%)
Query: 23 HLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR 78
+LSH ++ +Y QR +F Y C++ L + RHR
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM------------------RHR 107
Query: 79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN---------------IFNDD 123
+ T L + K+ + + YL+ + H++++A + L N + +D+
Sbjct: 108 FQ-TQQLLEMC-KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 165
Query: 124 TRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSR 176
+ PEV+ + +S KSDIW G+ + + G +P R
Sbjct: 166 YTS--SVGSKFPVRWSPPEVLMYSK--FSSKSDIWAFGVLMWEIYSLGKMPYER 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 44/174 (25%)
Query: 23 HLSHPNIIPIYKTMISQRQLF----YAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHR 78
+LSH ++ +Y QR +F Y C++ L + RHR
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM------------------RHR 116
Query: 79 YGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN---------------IFNDD 123
+ T L + K+ + + YL+ + H++++A + L N + +D+
Sbjct: 117 FQ-TQQLLEMC-KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
Query: 124 TRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSR 176
+ PEV+ + +S KSDIW G+ + + G +P R
Sbjct: 175 YTS--SVGSKFPVRWSPPEVLMYSK--FSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 93/242 (38%), Gaps = 46/242 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFY-AEIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + + A
Sbjct: 60 KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA--- 116
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ ++ + + Y + + H+++ A ++L
Sbjct: 117 ----RSKF-----------RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
N+ T PE+ G Y + D+W +G+ G LP Q+L
Sbjct: 162 NEFTVGGKLDAFCGAPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 219
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ + +++ +S + N++K L +P KR E Q++++
Sbjct: 220 KELRERVLRGKYRIPF-------------YMSTDCENLLKRFLVLNPIKRGTLE-QIMKD 265
Query: 241 MW 242
W
Sbjct: 266 RW 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/242 (18%), Positives = 94/242 (38%), Gaps = 46/242 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + + A
Sbjct: 52 KLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA--- 108
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ ++ + + Y + + H+++ A ++L
Sbjct: 109 ----RAKF-----------RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
N+ T PE+ G Y + D+W +G+ G LP Q+L
Sbjct: 154 NEFTFGNKLDTFCGSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 211
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ + +++ +S + N++K L +P+KR E Q++++
Sbjct: 212 KELRERVLRGKYRIPF-------------YMSTDCENLLKKFLILNPSKRGTLE-QIMKD 257
Query: 241 MW 242
W
Sbjct: 258 RW 259
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 92/242 (38%), Gaps = 46/242 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFY-AEIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + + A
Sbjct: 57 KLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA--- 113
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ V + H++ + H+++ A ++L
Sbjct: 114 ----RSKFRQIVSAVQYCHQKR-----------IVHRDLKAENLLLDADMNIKIADFGFS 158
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
N+ T PE+ G Y + D+W +G+ G LP Q+L
Sbjct: 159 NEFTVGGKLDTFCGSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 216
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ + +++ +S + N++K L +P KR E Q++++
Sbjct: 217 KELRERVLRGKYRIPF-------------YMSTDCENLLKRFLVLNPIKRGTLE-QIMKD 262
Query: 241 MW 242
W
Sbjct: 263 RW 264
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 53/244 (21%)
Query: 8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPA 67
A+ A +EI K L+HPN+I Y + I +L G L ++ +
Sbjct: 73 AKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHF-----K 127
Query: 68 ATQLIMSNRHRYGITVD-CLAIAHKETLKGLSYLQGEGLFHKNISAGHI----------- 115
+ ++ R + V C A+ H + + H++I ++
Sbjct: 128 KQKRLIPERTVWKYFVQLCSALEH---------MHSRRVMHRDIKPANVFITATGVVKLG 178
Query: 116 ---LHNIFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIG-----ITALQF 167
L F+ ++ PE ++ ++ Y+ KSDIW +G + ALQ
Sbjct: 179 DLGLGRFFS--SKTTAAHSLVGTPYYMSPERIH--ENGYNFKSDIWSLGCLLYEMAALQS 234
Query: 168 PCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDP 227
P G +++ + L K+ + P++ + R L V +C+ PDP
Sbjct: 235 PFYG------DKMNLYS--LCKKIEQCDYPPLPSDHYSEELRQL-------VNMCINPDP 279
Query: 228 AKRP 231
KRP
Sbjct: 280 EKRP 283
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 84/246 (34%), Gaps = 46/246 (18%)
Query: 12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPAATQ 70
+ EI + HPNI+ + S L+ G L D I+ A++
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR----- 125
LI + L + YL G+ H+++ ++L+ ++D++
Sbjct: 121 LIF------------------QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 126 ---------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSR 176
PEV+ YS D W IG+ A CG P
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEVL--AQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
Query: 177 RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ 236
D + ++L + + S P D +S + + ++ + DP KR E Q
Sbjct: 221 ENDAKLFEQILKAEYEFDS----PYWD------DISDSAKDFIRHLMEKDPEKRFTCE-Q 269
Query: 237 VLQEMW 242
LQ W
Sbjct: 270 ALQHPW 275
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 85/246 (34%), Gaps = 46/246 (18%)
Query: 12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPAATQ 70
+ EI + HPNI+ + S L+ G L D I+ A++
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR----- 125
LI + L + YL G+ H+++ ++L+ ++D++
Sbjct: 121 LIF------------------QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 126 ---------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSR 176
PEV+ YS D W IG+ A CG P
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEVL--AQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
Query: 177 RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ 236
D + ++L + + S P D + +K+F ++ + DP KR E Q
Sbjct: 221 ENDAKLFEQILKAEYEFDS----PYWDDISDS---AKDF---IRHLMEKDPEKRFTCE-Q 269
Query: 237 VLQEMW 242
LQ W
Sbjct: 270 ALQHPW 275
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 85/246 (34%), Gaps = 47/246 (19%)
Query: 12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPAATQ 70
+ + RE+ K L HPNI+ +++ + + G L D I+ + + A +
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR 125
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT------ 124
+I K+ G++Y+ + H+++ +IL D
Sbjct: 126 II------------------KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 125 --------RNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSR 176
+N PEV+ Y K D+W G+ G P
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLR---GTYDEKCDVWSAGVILYILLSGTPPFYG 224
Query: 177 RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ 236
+ + DI+ + ++ RT+S + ++++ L P+ R A Q
Sbjct: 225 KNEYDILKR----------VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA-TQ 273
Query: 237 VLQEMW 242
L+ W
Sbjct: 274 CLEHPW 279
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 85/246 (34%), Gaps = 46/246 (18%)
Query: 12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPAATQ 70
+ EI + HPNI+ + S L+ G L D I+ A++
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR----- 125
LI + L + YL G+ H+++ ++L+ ++D++
Sbjct: 121 LIF------------------QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 126 ---------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSR 176
PEV+ YS D W IG+ A CG P
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEVL--AQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
Query: 177 RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ 236
D + ++L + + S P D + +K+F ++ + DP KR E Q
Sbjct: 221 ENDAKLFEQILKAEYEFDS----PYWDDISDS---AKDF---IRHLMEKDPEKRFTCE-Q 269
Query: 237 VLQEMW 242
LQ W
Sbjct: 270 ALQHPW 275
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 85/246 (34%), Gaps = 47/246 (19%)
Query: 12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPAATQ 70
+ + RE+ K L HPNI+ +++ + + G L D I+ + + A +
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR 125
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT------ 124
+I K+ G++Y+ + H+++ +IL D
Sbjct: 126 II------------------KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 125 --------RNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSR 176
+N PEV+ Y K D+W G+ G P
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLR---GTYDEKCDVWSAGVILYILLSGTPPFYG 224
Query: 177 RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ 236
+ + DI+ + ++ RT+S + ++++ L P+ R A Q
Sbjct: 225 KNEYDILKR----------VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA-TQ 273
Query: 237 VLQEMW 242
L+ W
Sbjct: 274 CLEHPW 279
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 84/246 (34%), Gaps = 46/246 (18%)
Query: 12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPAATQ 70
+ EI + HPNI+ + S L+ G L D I+ A++
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTR----- 125
LI + L + YL G+ H+++ ++L+ ++D++
Sbjct: 121 LIF------------------QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 126 ---------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSR 176
PEV+ YS D W IG+ A CG P
Sbjct: 163 FGLSKMEDPGSVLSTACGTPGYVAPEVL--AQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
Query: 177 RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ 236
D + ++L + + S P D +S + + ++ + DP KR E Q
Sbjct: 221 ENDAKLFEQILKAEYEFDS----PYWD------DISDSAKDFIRHLMEKDPEKRFTCE-Q 269
Query: 237 VLQEMW 242
LQ W
Sbjct: 270 ALQHPW 275
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 44/238 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ + H N++ +Y + + +L+ G+L I+T+ +N
Sbjct: 68 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------ 121
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXXX 133
I CLA+ L+ LS L +G+ H++I + IL + +D
Sbjct: 122 -------IAAVCLAV-----LQALSVLHAQGVIHRDIKSDSIL--LTHDGRVKLSDFGFC 167
Query: 134 XXXXXXXPEVVNF-GDDY-----------YSCKSDIWLIGITALQFPCGGLPVSRRQDLD 181
P G Y Y + DIW +GI ++ G P L
Sbjct: 168 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 227
Query: 182 IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
M KM+ + P H K F + + L DPA+R A A++L+
Sbjct: 228 AM-KMIRD-------NLPPRLKNLHKVSPSLKGFLDRL---LVRDPAQR-ATAAELLK 273
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 38/196 (19%)
Query: 7 QAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGS--LDSIMTYRPLN 64
Q + L RE+ K L HPNI +Y+ + FY G D I++ + +
Sbjct: 66 QKTDKESLLREVQLLKQLDHPNIXKLYE-FFEDKGYFYLVGEVYTGGELFDEIISRKRFS 124
Query: 65 SPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDT 124
A ++I ++ L G++Y + H+++ ++L + D
Sbjct: 125 EVDAARII------------------RQVLSGITYXHKNKIVHRDLKPENLLLESKSKDA 166
Query: 125 R--------------NXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCG 170
+ PEV++ Y K D+W G+ G
Sbjct: 167 NIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLH---GTYDEKCDVWSTGVILYILLSG 223
Query: 171 GLPVSRRQDLDIMTKM 186
P + + DI+ K+
Sbjct: 224 CPPFNGANEYDILKKV 239
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 44/238 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ + H N++ +Y + + +L+ G+L I+T+ +N
Sbjct: 75 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------ 128
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXXX 133
I CLA+ L+ LS L +G+ H++I + IL + +D
Sbjct: 129 -------IAAVCLAV-----LQALSVLHAQGVIHRDIKSDSIL--LTHDGRVKLSDFGFC 174
Query: 134 XXXXXXXPEVVNF-GDDY-----------YSCKSDIWLIGITALQFPCGGLPVSRRQDLD 181
P G Y Y + DIW +GI ++ G P L
Sbjct: 175 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 234
Query: 182 IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
M KM+ + P H K F + + L DPA+R A A++L+
Sbjct: 235 AM-KMIRD-------NLPPRLKNLHKVSPSLKGFLDRL---LVRDPAQR-ATAAELLK 280
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 44/238 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ + H N++ +Y + + +L+ G+L I+T+ +N
Sbjct: 64 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------ 117
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXXX 133
I CLA+ L+ LS L +G+ H++I + IL + +D
Sbjct: 118 -------IAAVCLAV-----LQALSVLHAQGVIHRDIKSDSIL--LTHDGRVKLSDFGFC 163
Query: 134 XXXXXXXPEVVNF-GDDY-----------YSCKSDIWLIGITALQFPCGGLPVSRRQDLD 181
P G Y Y + DIW +GI ++ G P L
Sbjct: 164 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 223
Query: 182 IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
M KM+ + P H K F + + L DPA+R A A++L+
Sbjct: 224 AM-KMIRD-------NLPPRLKNLHKVSPSLKGFLDRL---LVRDPAQR-ATAAELLK 269
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 44/238 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ + H N++ +Y + + +L+ G+L I+T+ +N
Sbjct: 73 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------ 126
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXXX 133
I CLA+ L+ LS L +G+ H++I + IL + +D
Sbjct: 127 -------IAAVCLAV-----LQALSVLHAQGVIHRDIKSDSIL--LTHDGRVKLSDFGFC 172
Query: 134 XXXXXXXPEVVNF-GDDY-----------YSCKSDIWLIGITALQFPCGGLPVSRRQDLD 181
P G Y Y + DIW +GI ++ G P L
Sbjct: 173 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 232
Query: 182 IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
M KM+ + P H K F + + L DPA+R A A++L+
Sbjct: 233 AM-KMIRD-------NLPPRLKNLHKVSPSLKGFLDRL---LVRDPAQR-ATAAELLK 278
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 36/190 (18%)
Query: 12 AKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSL-DSIMTYRPLNSPAATQ 70
+ + RE+ K L HPNI+ +++ + + G L D I+ + + A +
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR 125
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDD------- 123
+I K+ G++Y+ + H+++ +IL D
Sbjct: 126 II------------------KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167
Query: 124 -------TRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSR 176
+N PEV+ Y K D+W G+ G P
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLR---GTYDEKCDVWSAGVILYILLSGTPPFYG 224
Query: 177 RQDLDIMTKM 186
+ + DI+ ++
Sbjct: 225 KNEYDILKRV 234
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 44/238 (18%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ + H N++ +Y + + +L+ G+L I+T+ +N
Sbjct: 118 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQ------ 171
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXXX 133
I CLA+ L+ LS L +G+ H++I + IL + +D
Sbjct: 172 -------IAAVCLAV-----LQALSVLHAQGVIHRDIKSDSIL--LTHDGRVKLSDFGFC 217
Query: 134 XXXXXXXPEVVNF-GDDY-----------YSCKSDIWLIGITALQFPCGGLPVSRRQDLD 181
P G Y Y + DIW +GI ++ G P L
Sbjct: 218 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 277
Query: 182 IMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
M KM+ + P H K F + + L DPA+R A A++L+
Sbjct: 278 AM-KMIRD-------NLPPRLKNLHKVSPSLKGFLDRL---LVRDPAQR-ATAAELLK 323
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 18/118 (15%)
Query: 85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------IFNDDTRNXXXX 130
C E + L YL G+G+ H+++ +IL N + + +++
Sbjct: 138 CTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
Query: 131 XXXXXXXXXXPEVVNFGDDYYSCK-SDIWLIGITALQFPCGGLPVSRRQDLDIMTKML 187
PE++ + +CK SD+W +G Q G P + I K++
Sbjct: 198 XFVGTAQYVSPELLT---EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 252
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/233 (18%), Positives = 88/233 (37%), Gaps = 40/233 (17%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
L H N++ + ++ ++ Y M + S++ Y + +R R +
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYM--AKGSLVDY------------LRSRGRSVLG 287
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN---------DDTRNXXXXXXX 133
DCL + + + YL+G H++++A ++L + N +
Sbjct: 288 GDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 347
Query: 134 XXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMTKMLMKQPK 192
PE + + +S KSD+W GI + + G +P R D++ ++
Sbjct: 348 LPVKWTAPEALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV------ 399
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR 245
++ + + KN W++ D A RP Q+ +++ H R
Sbjct: 400 EKGYKMDAPDGCPPAVYDVMKNCWHL-------DAATRPTF-LQLREQLEHIR 444
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 22/107 (20%)
Query: 96 GLSYLQGEGLFHKNISAGHIL---------------HNIFNDDTRNXXXXXXXXXXXXXX 140
G+ YL+ + H+N++A ++L + DD+
Sbjct: 448 GMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 507
Query: 141 PEVVNFGDDYYSCKSDIWLIGIT---ALQFPCGGLPVSRRQDLDIMT 184
PE +NF +S +SD+W G+T AL + G P + + ++M
Sbjct: 508 PECINFRK--FSSRSDVWSYGVTMWEALSY--GQKPYKKMKGPEVMA 550
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQ 190
PEV+N ++ Y K D W G+ G +P D D ++++L K+
Sbjct: 243 PEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKK 292
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 30/166 (18%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
L H N++ + ++ ++ Y M + S++ Y + +R R +
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYM--AKGSLVDY------------LRSRGRSVLG 115
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXXXXXXXXXXXX---- 138
DCL + + + YL+G H++++A ++L + D+
Sbjct: 116 GDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVL--VSEDNVAKVSDFGLTKEASSTQDT 173
Query: 139 -------XXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSR 176
PE + + +S KSD+W GI + + G +P R
Sbjct: 174 GKLPVKWTAPEALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
+YS +SDIW +G++ ++ G P +++ ++ + P +
Sbjct: 182 HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLP------------SA 229
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH 243
S F + V CL +PA+R A + Q M H
Sbjct: 230 VFSLEFQDFVNKCLIKNPAER----ADLKQLMVH 259
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 26/164 (15%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
L H N++ + ++ ++ Y M + S++ Y + +R R +
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYM--AKGSLVDY------------LRSRGRSVLG 100
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN---------DDTRNXXXXXXX 133
DCL + + + YL+G H++++A ++L + N +
Sbjct: 101 GDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160
Query: 134 XXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSR 176
PE + + +S KSD+W GI + + G +P R
Sbjct: 161 LPVKWTAPEALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 18/103 (17%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
L E+ + H N++ +Y + + +L+ G+L I+T+ +N
Sbjct: 195 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE-------- 246
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
I CLA+ L+ LS L +G+ H++I + IL
Sbjct: 247 -----EQIAAVCLAV-----LQALSVLHAQGVIHRDIKSDSIL 279
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 20/86 (23%)
Query: 154 KSDIWLIGITALQFPCGGLPVSRRQDL--DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTL 211
K+DI+ + +T + G P+ R D +I L + P+ L
Sbjct: 207 KADIFALALTVVX-AAGAEPLPRNGDQWHEIRQGRLPRIPQ-----------------VL 248
Query: 212 SKNFWNMVKICLAPDPAKRPAAEAQV 237
S+ F ++K+ + PDP +RP+A A V
Sbjct: 249 SQEFTELLKVMIHPDPERRPSAMALV 274
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 42/169 (24%)
Query: 92 ETLKGLSYLQGEGLFHKNISAGHIL---------------HNIFNDDTRNXXXXXXXXXX 136
+ KG+++L + H++++A +IL +I ND
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 235
Query: 137 XXXXPEVVNFGDDYYSCKSDIWLIGITALQF------PCGGLPVSRRQDLDIMTKMLMKQ 190
+ N Y+ +SD+W GI + P G+PV + KM+ +
Sbjct: 236 WMAPESIFNC---VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKEG 287
Query: 191 PKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
+ S + AP E ++++K C DP KRP + Q++Q
Sbjct: 288 FRMLSPEHAPAE------------MYDIMKTCWDADPLKRPTFK-QIVQ 323
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 42/169 (24%)
Query: 92 ETLKGLSYLQGEGLFHKNISAGHIL---------------HNIFNDDTRNXXXXXXXXXX 136
+ KG+++L + H++++A +IL +I ND
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 230
Query: 137 XXXXPEVVNFGDDYYSCKSDIWLIGITALQF------PCGGLPVSRRQDLDIMTKMLMKQ 190
+ N Y+ +SD+W GI + P G+PV + KM+ +
Sbjct: 231 WMAPESIFNC---VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKEG 282
Query: 191 PKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
+ S + AP E ++++K C DP KRP + Q++Q
Sbjct: 283 FRMLSPEHAPAE------------MYDIMKTCWDADPLKRPTFK-QIVQ 318
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 42/169 (24%)
Query: 92 ETLKGLSYLQGEGLFHKNISAGHIL---------------HNIFNDDTRNXXXXXXXXXX 136
+ KG+++L + H++++A +IL +I ND
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 212
Query: 137 XXXXPEVVNFGDDYYSCKSDIWLIGITALQF------PCGGLPVSRRQDLDIMTKMLMKQ 190
+ N Y+ +SD+W GI + P G+PV + KM+ +
Sbjct: 213 WMAPESIFNC---VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKEG 264
Query: 191 PKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
+ S + AP E ++++K C DP KRP + Q++Q
Sbjct: 265 FRMLSPEHAPAE------------MYDIMKTCWDADPLKRPTFK-QIVQ 300
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 56/186 (30%)
Query: 91 KETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXX---------------------- 128
++ L+ LSY+ +G+ H+N+ NIF D++RN
Sbjct: 123 RQILEALSYIHSQGIIHRNLKP----XNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 129 --------XXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ----FPCGGLPVSR 176
EV++ G +Y+ K D + +GI + F G V+
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVN- 236
Query: 177 RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ 236
++K+ +S S++ P+ D K ++++ + DP KRP A
Sbjct: 237 ----------ILKKLRSVSIEFPPDFDDNK-----XKVEKKIIRLLIDHDPNKRPGART- 280
Query: 237 VLQEMW 242
+L W
Sbjct: 281 LLNSGW 286
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 42/169 (24%)
Query: 92 ETLKGLSYLQGEGLFHKNISAGHIL---------------HNIFNDDTRNXXXXXXXXXX 136
+ KG+++L + H++++A +IL +I ND
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK 228
Query: 137 XXXXPEVVNFGDDYYSCKSDIWLIGITALQF------PCGGLPVSRRQDLDIMTKMLMKQ 190
+ N Y+ +SD+W GI + P G+PV + KM+ +
Sbjct: 229 WMAPESIFNC---VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKEG 280
Query: 191 PKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
+ S + AP E ++++K C DP KRP + Q++Q
Sbjct: 281 FRMLSPEHAPAE------------MYDIMKTCWDADPLKRPTFK-QIVQ 316
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 66/190 (34%), Gaps = 34/190 (17%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIM 73
+ RE L HP + +Y T +L++ L+ +L+
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG-----------------LSYAKNGELLK 121
Query: 74 SNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN--------------I 119
R C E + L YL G+G+ H+++ +IL N +
Sbjct: 122 YIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
Query: 120 FNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQD 179
+ +++ PE++ + SD+W +G Q GLP R +
Sbjct: 182 LSPESKQARANXFVGTAQYVSPELLT--EKSAXKSSDLWALGCIIYQL-VAGLPPFRAGN 238
Query: 180 LDIMTKMLMK 189
++ ++K
Sbjct: 239 EGLIFAKIIK 248
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKML 187
PEVVN+ D+ S +D+W +G+ A G P D + + +L
Sbjct: 257 PEVVNY--DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNIL 301
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 209 RTLSKNFWNMVKICLAPDPAKRPAAEAQV 237
+ LS+ F ++K+ + PDP +RP+A A V
Sbjct: 250 QVLSQEFTELLKVMIHPDPERRPSAMALV 278
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 209 RTLSKNFWNMVKICLAPDPAKRPAAEAQV 237
+ LS+ F ++K+ + PDP +RP+A A V
Sbjct: 248 QVLSQEFTELLKVMIHPDPERRPSAMALV 276
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 209 RTLSKNFWNMVKICLAPDPAKRPAAEAQV 237
+ LS+ F ++K+ + PDP +RP+A A V
Sbjct: 248 QVLSQEFTELLKVMIHPDPERRPSAMALV 276
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 75/193 (38%), Gaps = 27/193 (13%)
Query: 4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPL 63
I + A A LA E L H N++ + ++ ++ Y M + S++ Y
Sbjct: 43 IKNDATAQAFLA-EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM--AKGSLVDY--- 96
Query: 64 NSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNIFN-- 121
+ +R R + DCL + + + YL+G H++++A ++L + N
Sbjct: 97 ---------LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA 147
Query: 122 -------DDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLP 173
+ PE + + +S KSD+W GI + + G +P
Sbjct: 148 KVSDFGLTKEASSTQDTGKLPVKWTAPEALR--EAAFSTKSDVWSFGILLWEIYSFGRVP 205
Query: 174 VSRRQDLDIMTKM 186
R D++ ++
Sbjct: 206 YPRIPLKDVVPRV 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 40/168 (23%)
Query: 92 ETLKGLSYLQGEGLFHKNISAGHIL--------------HNIFNDDTRNXXXXXXXXXXX 137
+ KG+++L + H++++A +IL +D+
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK 235
Query: 138 XXXPEVVNFGDDYYSCKSDIWLIGITALQF------PCGGLPVSRRQDLDIMTKMLMKQP 191
PE + + Y+ +SD+W GI + P G+PV + KM+ +
Sbjct: 236 WMAPESIF--NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMIKEGF 288
Query: 192 KSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQ 239
+ S + AP E ++++K C DP KRP + Q++Q
Sbjct: 289 RMLSPEHAPAE------------MYDIMKTCWDADPLKRPTFK-QIVQ 323
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 232
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 233 -------HLIRWCLALRPSDRPTFE 250
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 189 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 235
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 236 -------HLIRWCLALRPSDRPTFE 253
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 90/242 (37%), Gaps = 46/242 (19%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + A
Sbjct: 59 KLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA--- 115
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ V + H++ + H+++ A ++L
Sbjct: 116 ----RAKFRQIVSAVQYCHQKF-----------IVHRDLKAENLLLDADXNIKIADFGFS 160
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL 180
N+ T PE+ G Y + D+W +G+ G LP Q+L
Sbjct: 161 NEFTFGNKLDAFCGAPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLPFD-GQNL 218
Query: 181 DIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQE 240
+ + +++ S + N++K L +P+KR E Q+ ++
Sbjct: 219 KELRERVLRGKYRIPFYX-------------STDCENLLKKFLILNPSKRGTLE-QIXKD 264
Query: 241 MW 242
W
Sbjct: 265 RW 266
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
+YS +SDIW +G++ ++ G P+ + ++L + P G
Sbjct: 198 HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL------DYIVNEPPPKLPSGVF 251
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH 243
+L F + V CL +PA+R A + Q M H
Sbjct: 252 SL--EFQDFVNKCLIKNPAER----ADLKQLMVH 279
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIAC 49
E++ + RE++ +L+HPNI+ +Y M + ++ + C
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPC 105
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIAC 49
E++ + RE++ +L+HPNI+ +Y M + ++ + C
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPC 105
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 9 EEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIAC 49
E++ + RE++ +L+HPNI+ +Y M + ++ + C
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPC 105
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IGGQVFFRQRVSSECQ------------ 232
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 233 -------HLIRWCLALRPSDRPTFE 250
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 236
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 237 -------HLIRWCLALRPSDRPTFE 254
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 145
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILIN 181
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 15/90 (16%)
Query: 95 KGLSYLQGEGLFHKNISAGHILHNI-------------FNDDTRNXXXXXXXXXXXXXXP 141
+G+++++ H+++ A +IL + +D P
Sbjct: 122 EGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 181
Query: 142 EVVNFGDDYYSCKSDIWLIGITALQFPCGG 171
E +NFG ++ KSD+W GI ++ G
Sbjct: 182 EAINFGS--FTIKSDVWSFGILLMEIVTYG 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP 200
PEV+ D+ Y D W +G+ + CG LP + + +LM++ +
Sbjct: 178 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------- 228
Query: 201 NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR 245
RTL +++ L DP +R ++ +E+ R
Sbjct: 229 -------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 266
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL----------------RKHDAQFT 116
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 152
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 237
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 238 -------HLIRWCLALRPSDRPTFE 255
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 237
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 238 -------HLIRWCLALRPSDRPTFE 255
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 237
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 238 -------HLIRWCLALRPSDRPTFE 255
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP 200
PEV+ D+ Y D W +G+ + CG LP + + +LM++ +
Sbjct: 179 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------- 229
Query: 201 NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR 245
RTL +++ L DP +R ++ +E+ R
Sbjct: 230 -------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 267
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 236
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 237 -------HLIRWCLALRPSDRPTFE 254
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL----------------RKHDAQFT 145
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILIN 181
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL----------------RKHDAQFT 145
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP 200
PEV+ D+ Y D W +G+ + CG LP + + +LM++ +
Sbjct: 180 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------- 230
Query: 201 NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR 245
RTL +++ L DP +R ++ +E+ R
Sbjct: 231 -------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 268
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 16/118 (13%)
Query: 1 VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
+++ + AE + RE+ K L HPNI+ + L GSL Y
Sbjct: 68 LMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL-----Y 122
Query: 61 RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEG--LFHKNISAGHIL 116
R L+ A + + R R + D KG++YL + H+N+ + ++L
Sbjct: 123 RLLHKSGAREQ-LDERRRLSMAYD--------VAKGMNYLHNRNPPIVHRNLKSPNLL 171
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 18/105 (17%)
Query: 96 GLSYLQGEGLFHKNISAGHIL---------------HNIFNDDTRNXXXXXXXXXXXXXX 140
G+ YL+ + H++++A ++L + DD+
Sbjct: 122 GMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 181
Query: 141 PEVVNFGDDYYSCKSDIWLIGITALQ-FPCGGLPVSRRQDLDIMT 184
PE +NF +S +SD+W G+T + G P + + ++M
Sbjct: 182 PECINFRK--FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA 224
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 279
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 280 -------HLIRWCLALRPSDRPTFE 297
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S Q
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSXECQ------------ 232
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 233 -------HLIRWCLALRPSDRPTFE 250
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/173 (18%), Positives = 66/173 (38%), Gaps = 31/173 (17%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLNSPAATQL 71
KL RE+ K L+HPNI+ +++ + +++ L+ E A D ++ + + A
Sbjct: 60 KLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA--- 116
Query: 72 IMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL-----------HNIF 120
R ++ ++ + + Y + + H+++ A ++L
Sbjct: 117 ----RAKF-----------RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
Query: 121 NDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
N+ T PE+ G Y + D+W +G+ G LP
Sbjct: 162 NEFTVGNKLDTFCGSPPYAAPELFQ-GKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 279
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 280 -------HLIRWCLALRPSDRPTFE 297
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 99/277 (35%), Gaps = 67/277 (24%)
Query: 4 INHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSI-MTY-- 60
I H E+ + + E+ L+H ++ Y + +R A S I M Y
Sbjct: 39 IRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCE 98
Query: 61 -RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI 119
R L ++ + R Y ++ L+ LSY+ +G+ H+++ NI
Sbjct: 99 NRTLYDLIHSENLNQQRDEYWRLF-------RQILEALSYIHSQGIIHRDLKP----MNI 147
Query: 120 FNDDTRNXX------------------------------XXXXXXXXXXXXPEVVNFGDD 149
F D++RN EV++ G
Sbjct: 148 FIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD-GTG 206
Query: 150 YYSCKSDIWLIGITALQ----FPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTT 205
+Y+ K D++ +GI + F G V+ ++K+ +S S++ P+ D
Sbjct: 207 HYNEKIDMYSLGIIFFEMIYPFSTGMERVN-----------ILKKLRSVSIEFPPDFDDN 255
Query: 206 HGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
K ++++ + DP KRP A +L W
Sbjct: 256 K-----MKVEKKIIRLLIDHDPNKRPGART-LLNSGW 286
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 264
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 265 -------HLIRWCLALRPSDRPTFE 282
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 251
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 252 -------HLIRWCLALRPSDRPTFE 269
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 33/160 (20%)
Query: 16 REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
REI K L+HPNI+ + + ++ +L+ ++ S+ + +++ A T
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLY------LVFEFLSMDLKKFMDASALT------ 99
Query: 76 RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------------FN 121
GI + + + L+GL++ + H+++ ++L N F
Sbjct: 100 ----GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG 155
Query: 122 DDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIG 161
R PE++ G YYS DIW +G
Sbjct: 156 VPVRT--YXHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLG 192
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Query: 151 YSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRT 210
++ KSD+W G+ + G P R D +T L + + + P+
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD--------- 255
Query: 211 LSKNFWNMVKICLAPDPAKRP 231
+ + +++ C DPA RP
Sbjct: 256 ---SLYQVMQQCWEADPAVRP 273
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 252
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 253 -------HLIRWCLALRPSDRPTFE 270
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 33/160 (20%)
Query: 16 REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
REI K L+HPNI+ + + ++ +L+ ++ S+ + +++ A T
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLY------LVFEFLSMDLKKFMDASALT------ 101
Query: 76 RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------------FN 121
GI + + + L+GL++ + H+++ ++L N F
Sbjct: 102 ----GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFG 157
Query: 122 DDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIG 161
R PE++ G YYS DIW +G
Sbjct: 158 VPVRT--YXHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLG 194
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 95 KGLSYLQGEGLFHKNISAGHILHN---IFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYY 151
+G+++++ H+++ A +IL + + PE +NFG +
Sbjct: 289 EGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGS--F 346
Query: 152 SCKSDIWLIGITALQFPCGG 171
+ KSD+W GI ++ G
Sbjct: 347 TIKSDVWSFGILLMEIVTYG 366
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP 200
PEV+ D+ Y D W +G+ + CG LP + + +LM++ +
Sbjct: 318 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------- 368
Query: 201 NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR 245
RTL +++ L DP +R ++ +E+ R
Sbjct: 369 -------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 84/224 (37%), Gaps = 47/224 (20%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTM--ISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQ 70
++ +EI K L HPN++ + + + ++ L+ G + + T +PL+ A
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR- 140
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISA--------GHI------L 116
++ +KG+ YL + + H++I GHI +
Sbjct: 141 -----------------FYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGV 183
Query: 117 HNIFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKS-DIWLIGITALQFPCGGLPVS 175
N F + PE ++ +S K+ D+W +G+T F G P
Sbjct: 184 SNEFK--GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
Query: 176 RRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHG-----TRTLSKN 214
+ + + +K+ KS +L+ D TR L KN
Sbjct: 242 DERIMCLHSKI-----KSQALEFPDQPDIAEDLKDLITRMLDKN 280
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 225 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSSECQ------------ 271
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 272 -------HLIRWCLALRPSDRPTFE 289
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAP 200
PEV+ D+ Y D W +G+ + CG LP + + +LM++ +
Sbjct: 321 PEVLE--DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF------- 371
Query: 201 NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWHFR 245
RTL +++ L DP +R ++ +E+ R
Sbjct: 372 -------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 409
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 70/186 (37%), Gaps = 56/186 (30%)
Query: 91 KETLKGLSYLQGEGLFHKNISAGHILHNIFNDDTRNXX---------------------- 128
++ L+ LSY+ +G+ H+++ NIF D++RN
Sbjct: 123 RQILEALSYIHSQGIIHRDLKP----MNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 129 --------XXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQ----FPCGGLPVSR 176
EV++ G +Y+ K D++ +GI + F G V+
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN- 236
Query: 177 RQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQ 236
++K+ +S S++ P+ D K ++++ + DP KRP A
Sbjct: 237 ----------ILKKLRSVSIEFPPDFDDNK-----MKVEKKIIRLLIDHDPNKRPGART- 280
Query: 237 VLQEMW 242
+L W
Sbjct: 281 LLNSGW 286
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IGGQVFFRQRVSSECQ------------ 264
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 265 -------HLIRWCLALRPSDRPTFE 282
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 15/90 (16%)
Query: 95 KGLSYLQGEGLFHKNISAGHILHNI--------FN-----DDTRNXXXXXXXXXXXXXXP 141
+G+++++ H+++ A +IL + F +D P
Sbjct: 295 EGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 354
Query: 142 EVVNFGDDYYSCKSDIWLIGITALQFPCGG 171
E +NFG ++ KSD+W GI ++ G
Sbjct: 355 EAINFGS--FTIKSDVWSFGILLMEIVTYG 382
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IGGQVFFRQRVSSECQ------------ 264
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 265 -------HLIRWCLALRPSDRPTFE 282
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IGGQVFFRQRVSSECQ------------ 265
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 266 -------HLIRWCLALRPSDRPTFE 283
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S+ Q
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IGGQVFFRQRVSSECQ------------ 265
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 266 -------HLIRWCLALRPSDRPTFE 283
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 143
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 179
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 57/160 (35%), Gaps = 33/160 (20%)
Query: 16 REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
REI K L+HPNI+ + + ++ +L Y + L M L
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKL-YLVFEFLHQDLKKFMDASALT----------- 98
Query: 76 RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHNI--------------FN 121
GI + + + L+GLS+ + H+++ ++L N F
Sbjct: 99 ----GIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154
Query: 122 DDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIG 161
R PE++ G YYS DIW +G
Sbjct: 155 VPVRT--YTHEVVTLWYRAPEIL-LGCKYYSTAVDIWSLG 191
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 145
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 116
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 152
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 145
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 145
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 133
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 169
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 141 PEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDL-----DIMTKMLMKQPKSTS 195
PE + Y K DIW +GI +P S + L +I TK + + P +
Sbjct: 219 PEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI-EYPLDRN 277
Query: 196 LQVAP--NEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMW 242
+ P N+ +T LS + +K+ L +PA+R +E L+ W
Sbjct: 278 HFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE-DALKHEW 325
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 145
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 145
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 16/96 (16%)
Query: 23 HLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGIT 82
HPNII + + + + GSLDS + +H T
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----------------RKHDAQFT 145
Query: 83 VDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
V L + G+ YL G H++++A +IL N
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN 181
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 21/176 (11%)
Query: 10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ--LFYAEIACMIGSLDSIMTY------- 60
E L E+ + L HPNI+ Y +I + L+ C G L S++T
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 61 --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI-LH 117
TQL ++ + + + + H++ +L G+ +N+ G L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK----QNVKLGDFGLA 163
Query: 118 NIFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
I N DT PE +N Y+ KSDIW +G + C +P
Sbjct: 164 RILNHDT--SFAKTFVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYEL-CALMP 214
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S Q
Sbjct: 213 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSXECQ------------ 259
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 260 -------HLIRWCLALRPSDRPTFE 277
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 21/176 (11%)
Query: 10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ--LFYAEIACMIGSLDSIMTY------- 60
E L E+ + L HPNI+ Y +I + L+ C G L S++T
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 61 --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI-LH 117
TQL ++ + + + + H++ +L G+ +N+ G L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK----QNVKLGDFGLA 163
Query: 118 NIFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
I N DT PE +N Y+ KSDIW +G + C +P
Sbjct: 164 RILNHDT--SFAKAFVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYEL-CALMP 214
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI--GSLDSIMTYRPLNS 65
A ++ KL RE + L HPNI+ ++ ++ Q + F+ + ++ G L + R S
Sbjct: 45 ARDFQKLEREARICRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYS 102
Query: 66 PAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
A C+ ++ L+ ++Y G+ H+N+ ++L
Sbjct: 103 EADAS-------------HCI----QQILESIAYCHSNGIVHRNLKPENLL 136
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 87/236 (36%), Gaps = 52/236 (22%)
Query: 14 LAREIYRYKHLSHPNIIPIYKTMISQRQ-LFYAEIACMIGSLDSIMTYRPLNSPAATQLI 72
+ RE+ K + HPN+I +++ ++ + E+ D + L AT+ +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 73 --MSNRHRYGITVDCLAIAH----------------KETLKGLSYLQGEGLFHKNISAGH 114
+ N Y + L IAH K +K + + GL HK I G+
Sbjct: 121 KQILNGVYY---LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDF----GLAHK-IDFGN 172
Query: 115 ILHNIFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLPV 174
NIF PE+VN+ + ++D+W IG+ G P
Sbjct: 173 EFKNIFG-------------TPAFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPF 217
Query: 175 SRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKR 230
+ + + +++ ++ T L+K+F ++ L DP KR
Sbjct: 218 LGDTKQETLANV-------SAVNYEFEDEYFSNTSALAKDF---IRRLLVKDPKKR 263
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI--GSLDSIMTYRPLNS 65
A ++ KL RE + L HPNI+ ++ ++ Q + F+ + ++ G L + R S
Sbjct: 46 ARDFQKLEREARICRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYS 103
Query: 66 PAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
A C+ ++ L+ ++Y G+ H+N+ ++L
Sbjct: 104 EADAS-------------HCI----QQILESIAYCHSNGIVHRNLKPENLL 137
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 53 SLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISA 112
SL +M Y PL S + R+ I + L + ++ +G++YL + H+N++A
Sbjct: 92 SLQLVMEYVPLGS------LRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAA 145
Query: 113 GHIL 116
++L
Sbjct: 146 RNVL 149
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S Q
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSXECQ------------ 252
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 253 -------HLIRWCLALRPSDRPTFE 270
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S Q
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSXECQ------------ 251
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 252 -------HLIRWCLALRPSDRPTFE 269
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S Q
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSXECQ------------ 279
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 280 -------HLIRWCLALRPSDRPTFE 297
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI--GSLDSIMTYRPLNS 65
A ++ KL RE + L HPNI+ ++ ++ Q + F+ + ++ G L + R S
Sbjct: 69 ARDFQKLEREARICRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYS 126
Query: 66 PAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
A C+ ++ L+ ++Y G+ H+N+ ++L
Sbjct: 127 EADAS-------------HCI----QQILESIAYCHSNGIVHRNLKPENLL 160
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 20/85 (23%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHGTR 209
Y+ + +W +GI CG +P +++ I ++ +Q S Q
Sbjct: 238 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-IRGQVFFRQRVSXECQ------------ 284
Query: 210 TLSKNFWNMVKICLAPDPAKRPAAE 234
++++ CLA P+ RP E
Sbjct: 285 -------HLIRWCLALRPSDRPTFE 302
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 53 SLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISA 112
SL +M Y PL S + R+ I + L + ++ +G++YL + H+N++A
Sbjct: 92 SLQLVMEYVPLGS------LRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAA 145
Query: 113 GHIL 116
++L
Sbjct: 146 RNVL 149
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 21/111 (18%)
Query: 8 AEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMI--GSLDSIMTYRPLNS 65
A ++ KL RE + L HPNI+ ++ ++ Q + F+ + ++ G L + R S
Sbjct: 46 ARDFQKLEREARICRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYS 103
Query: 66 PAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHIL 116
A C+ ++ L+ ++Y G+ H+N+ ++L
Sbjct: 104 EADAS-------------HCI----QQILESIAYCHSNGIVHRNLKPENLL 137
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 13/93 (13%)
Query: 141 PEVVN--FGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQV 198
PE +N YS KSDIW +GIT ++ P K ++++P S Q+
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEP---SPQL 261
Query: 199 APNEDTTHGTRTLSKNFWNMVKICLAPDPAKRP 231
++ S F + CL + +RP
Sbjct: 262 PADK--------FSAEFVDFTSQCLKKNSKERP 286
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 13 KLAREIYRYKHLSHPNIIPIYKTMISQRQLF 43
+L REI HL HPNI+ +Y +R+++
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIY 99
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 16/118 (13%)
Query: 1 VIDINHQAEEYAKLAREIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTY 60
+++ + AE + RE+ K L HPNI+ + L GSL Y
Sbjct: 68 LMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL-----Y 122
Query: 61 RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEG--LFHKNISAGHIL 116
R L+ A + + R R + D KG++YL + H+++ + ++L
Sbjct: 123 RLLHKSGAREQ-LDERRRLSMAYD--------VAKGMNYLHNRNPPIVHRDLKSPNLL 171
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 16 REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPL-NSPAATQLIMS 74
REI K L H NI+ +Y + ++ +L M L M R + N+P
Sbjct: 52 REISLMKELKHENIVRLYDVIHTENKLTLV-FEFMDNDLKKYMDSRTVGNTPR------- 103
Query: 75 NRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
G+ ++ + + L+GL++ + H+++ ++L N
Sbjct: 104 -----GLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN 142
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 26/104 (25%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPV---SRRQD-------LDIMTKMLMKQPKSTSLQVA 199
+YS +SDIW +G++ ++ G P+ ++D +++ ++ + P
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLP---- 234
Query: 200 PNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVLQEMWH 243
+ S F + V CL +PA+R A + Q M H
Sbjct: 235 --------SGVFSLEFQDFVNKCLIKNPAER----ADLKQLMVH 266
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPV 174
+YS +SDIW +G++ ++ G P+
Sbjct: 189 HYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 141 PEVVN--FGDDYYSCKSDIWLIGITALQF 167
PE +N YS KSDIW +GIT ++
Sbjct: 222 PERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 16 REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
REI KH H NII I+ + E+ +I L +R + +TQ++ +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVY-IIQELMQTDLHRVI----STQMLSDD 112
Query: 76 RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
+Y I +TL+ + L G + H+++ ++L N
Sbjct: 113 HIQYFIY---------QTLRAVKVLHGSNVIHRDLKPSNLLIN 146
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 13/94 (13%)
Query: 141 PEVVN--FGDDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQV 198
PE +N YS KSDIW +GIT ++ P K ++++P S Q+
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP---SPQL 234
Query: 199 APNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPA 232
++ S F + CL + +RP
Sbjct: 235 PADK--------FSAEFVDFTSQCLKKNSKERPT 260
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 16 REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
REI KH H NII I+ + E+ +I L +R + +TQ++ +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVY-IIQELMQTDLHRVI----STQMLSDD 112
Query: 76 RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
+Y I +TL+ + L G + H+++ ++L N
Sbjct: 113 HIQYFIY---------QTLRAVKVLHGSNVIHRDLKPSNLLIN 146
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPV 174
+YS +SDIW +G++ ++ G P+
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPV 174
+YS +SDIW +G++ ++ G P+
Sbjct: 241 HYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 14/103 (13%)
Query: 16 REIYRYKHLSHPNIIPIYKTMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQLIMSN 75
REI KH H NII I+ + E+ +I L +R + +TQ++ +
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVY-IIQELMQTDLHRVI----STQMLSDD 112
Query: 76 RHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
+Y I +TL+ + L G + H+++ ++L N
Sbjct: 113 HIQYFIY---------QTLRAVKVLHGSNVIHRDLKPSNLLIN 146
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 53 SLDSIMTYRPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISA 112
SL +M Y PL S + R+ I + L + ++ +G++YL + H++++A
Sbjct: 109 SLQLVMEYVPLGS------LRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAA 162
Query: 113 GHIL 116
++L
Sbjct: 163 RNVL 166
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPV 174
+YS +SDIW +G++ ++ G P+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPV 174
+YS +SDIW +G++ ++ G P+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPV 174
+YS +SDIW +G++ ++ G P+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 150 YYSCKSDIWLIGITALQFPCGGLPV 174
+YS +SDIW +G++ ++ G P+
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 85/226 (37%), Gaps = 31/226 (13%)
Query: 26 HPNIIPIYKTMISQRQLFYA-EIACMIGSLDSIMTYRPLNSPAATQLIMSNRHRYGITVD 84
HPNII + + L+ A E A LD + R L + A ++N ++
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA--FAIANSTASTLSSQ 139
Query: 85 CLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN-----IFNDDTRNXXXXXXXXXXXXX 139
L + +G+ YL + H+N++A +IL D +
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 199
Query: 140 XP------EVVNFGDDYYSCKSDIWLIGITALQF-PCGGLPVSRRQDLDIMTKMLMKQPK 192
P E +N+ Y+ SD+W G+ + GG P ++ K+ P+
Sbjct: 200 LPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL----PQ 253
Query: 193 STSLQVAPNEDTTHGTRTLSKNFWNMVKICLAPDPAKRPAAEAQVL 238
L+ N D +++++ C P +RP+ AQ+L
Sbjct: 254 GYRLEKPLNCD---------DEVYDLMRQCWREKPYERPSF-AQIL 289
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 23/108 (21%)
Query: 16 REIYRYKHLSHPNIIPIYK-----TMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQ 70
RE+ KHL H N+I + T I Y M L++I+ + L+
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF 135
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
L+ + L+GL Y+ G+ H+++ ++ N
Sbjct: 136 LVY------------------QLLRGLKYIHSAGIIHRDLKPSNVAVN 165
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 21/176 (11%)
Query: 10 EYAKLAREIYRYKHLSHPNIIPIYKTMISQRQ--LFYAEIACMIGSLDSIMTY------- 60
E L E+ + L HPNI+ Y +I + L+ C G L S++T
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 61 --RPLNSPAATQLIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHI-LH 117
TQL ++ + + + + H++ +L G+ +N+ G L
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK----QNVKLGDFGLA 163
Query: 118 NIFNDDTRNXXXXXXXXXXXXXXPEVVNFGDDYYSCKSDIWLIGITALQFPCGGLP 173
I N D PE +N Y+ KSDIW +G + C +P
Sbjct: 164 RILNHD--EDFAKEFVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYEL-CALMP 214
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 148 DDYYSCKSDIWLIGITALQFPCGGLPVSRRQDLDIMTKMLMKQPKSTSLQVAPNEDTTHG 207
+D +D+W + + +P + +++I K+ ++ + T + P
Sbjct: 185 EDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT---IPPG------ 235
Query: 208 TRTLSKNFWNMVKICLAPDPAKRP 231
+S + ++KIC+ DPAKRP
Sbjct: 236 ---ISPHVSKLMKICMNEDPAKRP 256
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 23/108 (21%)
Query: 16 REIYRYKHLSHPNIIPIYK-----TMISQRQLFYAEIACMIGSLDSIMTYRPLNSPAATQ 70
RE+ KHL H N+I + T I Y M L++I+ + L+
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF 127
Query: 71 LIMSNRHRYGITVDCLAIAHKETLKGLSYLQGEGLFHKNISAGHILHN 118
L+ + L+GL Y+ G+ H+++ ++ N
Sbjct: 128 LVY------------------QLLRGLKYIHSAGIIHRDLKPSNVAVN 157
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,979,335
Number of Sequences: 62578
Number of extensions: 253847
Number of successful extensions: 1636
Number of sequences better than 100.0: 247
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 1400
Number of HSP's gapped (non-prelim): 321
length of query: 245
length of database: 14,973,337
effective HSP length: 96
effective length of query: 149
effective length of database: 8,965,849
effective search space: 1335911501
effective search space used: 1335911501
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)