Query 037275
Match_columns 992
No_of_seqs 939 out of 6302
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 18:01:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037275.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037275hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 8.2E-80 2.8E-84 759.6 40.6 603 3-618 7-754 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.1E-62 3.7E-67 607.0 29.3 520 50-579 100-742 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.1E-58 3.9E-63 566.8 35.2 564 38-605 4-627 (680)
4 4eco_A Uncharacterized protein 100.0 7.8E-59 2.7E-63 559.2 22.1 523 6-604 28-630 (636)
5 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-56 5.6E-61 547.6 36.5 536 53-600 7-597 (680)
6 3t6q_A CD180 antigen; protein- 100.0 4.1E-56 1.4E-60 536.8 35.3 495 75-582 34-565 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 2E-56 6.7E-61 557.0 26.7 546 38-606 14-593 (844)
8 3t6q_A CD180 antigen; protein- 100.0 8.8E-56 3E-60 533.9 30.6 506 41-557 15-564 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 3.8E-55 1.3E-59 528.3 34.5 518 51-588 33-569 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 7.6E-56 2.6E-60 539.7 24.2 490 5-578 266-865 (876)
11 3j0a_A TOLL-like receptor 5; m 100.0 2.8E-54 9.7E-59 537.5 38.6 527 54-605 8-565 (844)
12 3vq2_A TLR4, TOLL-like recepto 100.0 2.5E-55 8.6E-60 529.9 26.6 489 50-557 56-562 (606)
13 2z81_A CD282 antigen, TOLL-lik 100.0 1.9E-51 6.5E-56 490.0 23.6 495 37-583 3-516 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 1.1E-50 3.8E-55 486.0 27.4 511 52-605 30-561 (570)
15 4asz_A BDNF/NT-3 growth factor 100.0 1.2E-51 4.2E-56 442.8 13.3 265 679-985 13-290 (299)
16 4fih_A Serine/threonine-protei 100.0 1E-50 3.5E-55 440.1 19.6 250 679-977 74-323 (346)
17 3omv_A RAF proto-oncogene seri 100.0 3.7E-51 1.3E-55 438.4 15.9 264 678-987 35-303 (307)
18 4aoj_A High affinity nerve gro 100.0 7.7E-51 2.6E-55 442.9 18.4 265 679-985 41-320 (329)
19 4b9d_A Serine/threonine-protei 100.0 4.2E-51 1.4E-55 443.8 13.3 251 679-977 24-276 (350)
20 4g3f_A NF-kappa-beta-inducing 100.0 2.1E-50 7.2E-55 436.5 18.0 261 678-986 57-318 (336)
21 4gt4_A Tyrosine-protein kinase 100.0 2.1E-50 7.2E-55 435.1 15.9 261 680-982 27-304 (308)
22 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.5E-50 8.4E-55 430.3 15.4 249 679-976 32-283 (311)
23 3fpq_A Serine/threonine-protei 100.0 8.3E-50 2.8E-54 424.9 18.0 249 682-977 29-282 (290)
24 4fie_A Serine/threonine-protei 100.0 1.4E-49 4.9E-54 441.9 20.2 251 678-977 150-400 (423)
25 2z63_A TOLL-like receptor 4, v 100.0 2.5E-48 8.6E-53 465.6 31.0 510 58-605 15-536 (570)
26 3hyh_A Carbon catabolite-derep 100.0 3.7E-49 1.2E-53 415.9 18.0 247 678-977 12-262 (275)
27 3hmm_A TGF-beta receptor type- 100.0 7.9E-49 2.7E-53 424.6 19.5 285 679-985 3-298 (303)
28 4g8a_A TOLL-like receptor 4; l 100.0 4.6E-48 1.6E-52 470.0 27.4 514 75-607 53-613 (635)
29 4ase_A Vascular endothelial gr 100.0 6.4E-49 2.2E-53 431.0 17.9 272 674-985 59-348 (353)
30 4eco_A Uncharacterized protein 100.0 1.8E-48 6.1E-53 469.0 22.3 515 5-604 24-604 (636)
31 2z7x_B TOLL-like receptor 1, v 100.0 6.4E-48 2.2E-52 455.9 24.0 482 53-605 3-511 (520)
32 4g31_A Eukaryotic translation 100.0 2.9E-48 9.8E-53 417.6 17.8 264 678-977 4-279 (299)
33 2z81_A CD282 antigen, TOLL-lik 100.0 1.1E-47 3.6E-52 457.6 22.4 486 76-604 7-514 (549)
34 3ubd_A Ribosomal protein S6 ki 100.0 1.2E-48 4E-53 417.9 11.5 243 679-972 24-271 (304)
35 4ecn_A Leucine-rich repeat pro 100.0 6.4E-47 2.2E-51 461.2 26.6 470 74-605 323-871 (876)
36 4g8a_A TOLL-like receptor 4; l 100.0 3E-46 1E-50 454.0 30.6 508 83-605 40-585 (635)
37 4b99_A Mitogen-activated prote 100.0 3.8E-46 1.3E-50 416.5 17.1 284 679-977 54-344 (398)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.1E-45 1.8E-49 434.5 26.2 462 53-585 34-518 (562)
39 2z7x_B TOLL-like receptor 1, v 100.0 5.4E-46 1.9E-50 439.4 14.8 447 50-557 21-485 (520)
40 4f9c_A Cell division cycle 7-r 100.0 5.8E-45 2E-49 403.0 17.7 210 676-904 18-253 (361)
41 3v5w_A G-protein coupled recep 100.0 1.1E-43 3.9E-48 411.3 17.9 250 678-977 188-449 (689)
42 3uto_A Twitchin; kinase, muscl 100.0 1.6E-43 5.5E-48 415.7 18.2 253 678-977 156-410 (573)
43 1ogq_A PGIP-2, polygalacturona 100.0 3.3E-43 1.1E-47 385.0 18.8 294 3-303 1-302 (313)
44 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.1E-42 1E-46 410.6 21.0 444 50-557 52-514 (562)
45 3v47_A TOLL-like receptor 5B a 100.0 1.5E-41 5.1E-46 394.5 25.6 403 34-585 4-416 (455)
46 1jl5_A Outer protein YOPM; leu 100.0 5.4E-42 1.9E-46 394.0 19.4 422 68-601 5-430 (454)
47 3fxz_A Serine/threonine-protei 100.0 1.2E-41 4E-46 370.3 20.4 251 678-977 19-269 (297)
48 3v47_A TOLL-like receptor 5B a 100.0 1.9E-41 6.5E-46 393.6 23.0 397 30-557 9-412 (455)
49 3s95_A LIMK-1, LIM domain kina 100.0 1.4E-41 4.7E-46 373.0 18.0 273 678-989 9-287 (310)
50 2qkw_B Protein kinase; three-h 100.0 3.2E-41 1.1E-45 372.0 19.9 288 669-986 29-317 (321)
51 3soc_A Activin receptor type-2 100.0 3.5E-41 1.2E-45 371.4 20.0 285 678-985 23-319 (322)
52 3uim_A Brassinosteroid insensi 100.0 1.7E-41 5.8E-46 375.3 16.6 289 664-981 15-308 (326)
53 3ugc_A Tyrosine-protein kinase 100.0 2.1E-41 7E-46 368.9 16.3 281 678-987 9-294 (295)
54 3fe3_A MAP/microtubule affinit 100.0 5.7E-41 1.9E-45 369.1 17.7 249 677-977 13-264 (328)
55 3p86_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45 364.5 19.8 265 676-988 34-302 (309)
56 2nru_A Interleukin-1 receptor- 100.0 7.9E-40 2.7E-44 358.6 26.6 284 665-984 11-306 (307)
57 2c30_A Serine/threonine-protei 100.0 2.4E-40 8.2E-45 364.1 22.1 263 666-977 22-294 (321)
58 3zgw_A Maternal embryonic leuc 100.0 6.6E-41 2.3E-45 370.3 17.7 252 677-978 8-261 (347)
59 1jl5_A Outer protein YOPM; leu 100.0 4.3E-40 1.5E-44 378.2 23.4 408 49-582 10-434 (454)
60 4euu_A Serine/threonine-protei 100.0 2.8E-40 9.5E-45 364.1 20.2 273 679-982 9-307 (319)
61 2yab_A Death-associated protei 100.0 2.9E-40 9.8E-45 367.7 20.1 252 678-977 11-272 (361)
62 3q4u_A Activin receptor type-1 100.0 8E-40 2.7E-44 357.6 23.3 268 678-982 7-300 (301)
63 2psq_A Fibroblast growth facto 100.0 2.3E-40 8E-45 371.3 19.0 267 678-986 80-366 (370)
64 1o6l_A RAC-beta serine/threoni 100.0 5.3E-40 1.8E-44 362.2 21.0 249 678-977 4-260 (337)
65 3cbl_A C-FES, proto-oncogene t 100.0 1.7E-40 5.7E-45 374.0 17.1 261 678-985 113-375 (377)
66 3kul_A Ephrin type-A receptor 100.0 2.5E-40 8.7E-45 364.6 18.2 263 678-986 48-315 (325)
67 3g2f_A Bone morphogenetic prot 100.0 3E-40 1E-44 367.1 18.7 296 677-988 11-322 (336)
68 4aw2_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 375.2 18.6 263 671-977 66-338 (437)
69 3tki_A Serine/threonine-protei 100.0 1.9E-40 6.4E-45 365.1 15.7 254 678-977 6-261 (323)
70 1tki_A Titin; serine kinase, m 100.0 3.8E-40 1.3E-44 362.1 18.1 252 678-977 4-257 (321)
71 2izr_A Casein kinase I isoform 100.0 1.2E-39 4E-44 360.8 22.0 269 679-986 9-283 (330)
72 3op5_A Serine/threonine-protei 100.0 4E-40 1.4E-44 369.6 18.5 281 678-987 34-332 (364)
73 4eqm_A Protein kinase; transfe 100.0 3E-40 1E-44 358.8 16.6 261 679-984 11-275 (294)
74 4hcu_A Tyrosine-protein kinase 100.0 6.4E-40 2.2E-44 351.9 18.6 257 679-985 10-267 (269)
75 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.4E-40 1.9E-44 352.3 17.9 258 678-985 7-265 (268)
76 2pmi_A Negative RE, cyclin-dep 100.0 8.7E-40 3E-44 359.4 19.8 280 678-977 4-293 (317)
77 3c0i_A Peripheral plasma membr 100.0 1.2E-39 4E-44 363.3 21.0 256 678-977 23-286 (351)
78 3vhe_A Vascular endothelial gr 100.0 1.8E-40 6.2E-45 372.5 14.0 276 670-985 13-356 (359)
79 1csn_A Casein kinase-1; phosph 100.0 1.7E-39 5.8E-44 354.5 21.1 272 678-987 9-286 (298)
80 3lb7_A RAF proto-oncogene seri 100.0 5.5E-40 1.9E-44 358.8 17.1 265 678-988 35-304 (307)
81 3niz_A Rhodanese family protei 100.0 1E-39 3.5E-44 357.5 19.4 275 678-977 20-300 (311)
82 3soa_A Calcium/calmodulin-depe 100.0 1.2E-39 4.2E-44 372.1 20.7 255 676-977 8-267 (444)
83 2y0a_A Death-associated protei 100.0 1.8E-39 6.3E-44 357.9 21.3 252 678-977 10-271 (326)
84 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.4E-40 1.5E-44 365.3 15.1 250 677-977 21-280 (353)
85 4dc2_A Protein kinase C IOTA t 100.0 1.9E-39 6.6E-44 363.9 20.5 253 678-972 51-307 (396)
86 3qup_A Tyrosine-protein kinase 100.0 5E-40 1.7E-44 363.0 15.0 273 677-986 21-300 (323)
87 2qol_A Ephrin receptor; recept 100.0 7.7E-40 2.6E-44 367.2 16.7 262 678-985 44-310 (373)
88 2zv2_A Calcium/calmodulin-depe 100.0 1.9E-39 6.6E-44 353.7 19.4 252 678-977 12-292 (298)
89 3o0g_A Cell division protein k 100.0 1E-39 3.5E-44 354.7 17.2 274 679-977 2-282 (292)
90 4hgt_A Casein kinase I isoform 100.0 5.1E-39 1.8E-43 350.3 22.6 273 677-988 7-284 (296)
91 3g33_A Cell division protein k 100.0 8.2E-40 2.8E-44 358.5 16.3 279 677-977 7-296 (308)
92 2bdw_A Hypothetical protein K1 100.0 1.8E-39 6E-44 362.7 19.1 254 677-978 27-285 (362)
93 4f0f_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44 352.2 18.5 254 678-982 18-287 (287)
94 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.3E-39 4.5E-44 358.5 17.8 247 678-977 8-258 (336)
95 3uzp_A CKI-delta, CKID, casein 100.0 6.9E-39 2.3E-43 349.3 22.9 272 678-988 8-284 (296)
96 3gni_B Strad alpha; kinase fol 100.0 1.5E-39 5.2E-44 368.6 18.4 287 678-978 24-334 (389)
97 4eut_A Serine/threonine-protei 100.0 8.2E-40 2.8E-44 370.9 16.0 288 678-985 8-310 (396)
98 4fr4_A YANK1, serine/threonine 100.0 2.2E-39 7.7E-44 362.2 19.3 250 678-976 14-270 (384)
99 3v8s_A RHO-associated protein 100.0 1.7E-39 5.8E-44 366.6 18.5 259 672-977 62-329 (410)
100 3gen_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 349.2 20.0 258 678-985 23-281 (283)
101 3qd2_B Eukaryotic translation 100.0 3.2E-39 1.1E-43 358.3 20.0 265 677-977 4-325 (332)
102 1kob_A Twitchin; kinase, intra 100.0 1.7E-39 5.8E-44 364.8 17.8 253 678-977 50-304 (387)
103 3l9p_A Anaplastic lymphoma kin 100.0 7.4E-40 2.5E-44 367.0 14.9 267 678-986 70-347 (367)
104 1k9a_A Carboxyl-terminal SRC k 100.0 6E-39 2E-43 369.6 22.7 255 678-986 192-447 (450)
105 1xjd_A Protein kinase C, theta 100.0 1.1E-39 3.7E-44 360.7 15.7 251 675-976 13-268 (345)
106 1fot_A TPK1 delta, CAMP-depend 100.0 3.8E-39 1.3E-43 352.9 19.8 246 678-977 5-258 (318)
107 3rp9_A Mitogen-activated prote 100.0 1.9E-39 6.4E-44 376.0 18.3 205 679-893 53-279 (458)
108 3poz_A Epidermal growth factor 100.0 1.3E-39 4.3E-44 359.7 16.0 259 679-985 15-279 (327)
109 3uc3_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 360.5 19.4 254 678-978 19-275 (361)
110 3lxl_A Tyrosine-protein kinase 100.0 1.9E-39 6.6E-44 358.7 16.8 280 679-987 23-306 (327)
111 4e5w_A Tyrosine-protein kinase 100.0 3.4E-39 1.1E-43 352.8 18.5 275 679-983 21-301 (302)
112 3kex_A Receptor tyrosine-prote 100.0 3.2E-39 1.1E-43 356.4 17.8 259 679-985 13-277 (325)
113 1t46_A HOMO sapiens V-KIT hard 100.0 1.9E-39 6.6E-44 356.8 16.0 269 678-987 22-310 (313)
114 3ttj_A Mitogen-activated prote 100.0 2.6E-39 8.8E-44 372.9 17.6 278 678-977 61-355 (464)
115 4agu_A Cyclin-dependent kinase 100.0 2.5E-39 8.6E-44 355.3 16.7 277 678-977 2-284 (311)
116 3brb_A Proto-oncogene tyrosine 100.0 2.4E-39 8.1E-44 355.8 16.4 275 676-987 31-311 (313)
117 2x4f_A Myosin light chain kina 100.0 3.1E-39 1E-43 362.1 17.5 248 683-977 93-342 (373)
118 1rjb_A FL cytokine receptor; k 100.0 4.2E-39 1.5E-43 358.9 18.4 271 677-988 43-338 (344)
119 3a8x_A Protein kinase C IOTA t 100.0 6.4E-39 2.2E-43 355.4 19.6 253 678-972 8-264 (345)
120 1ob3_A PFPK5, cell division co 100.0 1.4E-39 4.7E-44 352.9 13.9 272 679-977 2-280 (288)
121 2w4o_A Calcium/calmodulin-depe 100.0 2E-39 6.8E-44 360.9 15.4 251 678-977 52-305 (349)
122 1luf_A Muscle-specific tyrosin 100.0 1.1E-39 3.6E-44 363.8 13.2 272 676-989 44-340 (343)
123 3llt_A Serine/threonine kinase 100.0 2.3E-39 7.8E-44 363.5 16.0 210 667-901 23-262 (360)
124 2v62_A Serine/threonine-protei 100.0 1.9E-39 6.5E-44 361.2 15.1 272 679-983 37-327 (345)
125 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.1E-39 2.1E-43 356.0 19.2 246 678-977 40-293 (350)
126 3tt0_A Basic fibroblast growth 100.0 9.8E-39 3.4E-43 360.4 21.1 267 678-986 68-354 (382)
127 2ac3_A MAP kinase-interacting 100.0 1.1E-38 3.9E-43 351.0 21.1 275 678-977 11-295 (316)
128 2i0e_A Protein kinase C-beta I 100.0 4.5E-39 1.6E-43 356.9 17.9 250 677-977 18-276 (353)
129 1mp8_A Focal adhesion kinase 1 100.0 1.9E-39 6.5E-44 350.5 14.5 261 678-987 14-279 (281)
130 2vd5_A DMPK protein; serine/th 100.0 4.3E-39 1.5E-43 363.5 18.0 263 670-977 52-327 (412)
131 1opk_A P150, C-ABL, proto-onco 100.0 3.2E-39 1.1E-43 376.0 17.4 258 678-983 219-477 (495)
132 3f3z_A Calcium/calmodulin-depe 100.0 1.2E-38 4.1E-43 343.7 20.5 252 677-977 7-261 (277)
133 1qcf_A Haematopoetic cell kina 100.0 2.8E-39 9.6E-44 373.1 16.7 262 678-989 187-449 (454)
134 2w1i_A JAK2; chromosomal rearr 100.0 4.8E-39 1.6E-43 355.3 17.5 281 678-987 40-325 (326)
135 3ork_A Serine/threonine protei 100.0 1.6E-39 5.5E-44 356.5 13.5 266 678-983 11-280 (311)
136 2ivs_A Proto-oncogene tyrosine 100.0 3.4E-39 1.2E-43 354.9 16.2 266 678-985 22-312 (314)
137 3dtc_A Mitogen-activated prote 100.0 4.4E-39 1.5E-43 345.8 16.6 254 678-982 6-271 (271)
138 2eva_A TAK1 kinase - TAB1 chim 100.0 4.8E-39 1.7E-43 351.7 17.0 257 679-986 8-265 (307)
139 3kfa_A Tyrosine-protein kinase 100.0 4.6E-39 1.6E-43 349.1 16.6 262 677-986 11-273 (288)
140 2id5_A Lingo-1, leucine rich r 100.0 2.3E-38 7.8E-43 369.7 23.7 331 172-607 33-363 (477)
141 3n9x_A Phosphotransferase; mal 100.0 6.7E-39 2.3E-43 367.4 18.7 212 678-899 25-253 (432)
142 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-39 6.1E-44 352.2 12.8 261 678-984 23-288 (289)
143 3kn6_A Ribosomal protein S6 ki 100.0 6.3E-39 2.2E-43 353.2 17.1 251 684-977 16-270 (325)
144 2a2a_A Death-associated protei 100.0 2.2E-38 7.6E-43 349.1 21.5 252 678-977 11-272 (321)
145 3eb0_A Putative uncharacterize 100.0 6.3E-39 2.2E-43 362.3 17.3 281 675-977 3-321 (383)
146 3kmu_A ILK, integrin-linked ki 100.0 7.7E-39 2.6E-43 344.1 17.0 255 678-984 9-270 (271)
147 3t9t_A Tyrosine-protein kinase 100.0 9.9E-39 3.4E-43 342.3 17.8 258 678-985 7-265 (267)
148 1qpc_A LCK kinase; alpha beta 100.0 2E-38 6.9E-43 342.2 20.0 263 678-990 12-275 (279)
149 2wqm_A Serine/threonine-protei 100.0 1.7E-38 5.7E-43 348.5 19.7 267 678-987 31-300 (310)
150 3f66_A Hepatocyte growth facto 100.0 5.8E-39 2E-43 350.1 15.9 268 678-989 24-296 (298)
151 4fvq_A Tyrosine-protein kinase 100.0 1.6E-39 5.6E-44 352.8 11.4 253 678-984 7-275 (289)
152 3p1a_A MYT1 kinase, membrane-a 100.0 1.2E-38 3.9E-43 349.4 18.0 245 679-977 57-304 (311)
153 1nxk_A MAP kinase-activated pr 100.0 1.9E-38 6.6E-43 359.2 20.2 258 678-978 60-322 (400)
154 1cm8_A Phosphorylated MAP kina 100.0 1E-38 3.5E-43 357.5 17.7 277 678-977 24-307 (367)
155 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-38 3.7E-43 350.9 17.5 276 681-989 33-315 (318)
156 3kk8_A Calcium/calmodulin depe 100.0 2.4E-38 8.2E-43 342.7 19.9 252 678-977 5-261 (284)
157 3oz6_A Mitogen-activated prote 100.0 1.8E-38 6.1E-43 359.5 19.6 212 676-901 6-234 (388)
158 3qyz_A Mitogen-activated prote 100.0 1.8E-38 6.2E-43 356.1 19.4 283 678-977 26-313 (364)
159 2y94_A 5'-AMP-activated protei 100.0 9.3E-39 3.2E-43 367.0 17.4 248 678-977 15-266 (476)
160 2qr7_A Ribosomal protein S6 ki 100.0 1.8E-38 6.2E-43 351.3 18.9 253 677-977 20-277 (342)
161 3is5_A Calcium-dependent prote 100.0 9.6E-39 3.3E-43 345.6 16.3 253 679-977 22-278 (285)
162 2i1m_A Macrophage colony-stimu 100.0 1.1E-38 3.7E-43 353.9 17.1 271 676-987 43-329 (333)
163 2a19_B Interferon-induced, dou 100.0 8.5E-39 2.9E-43 346.3 15.8 258 677-987 9-277 (284)
164 3lzb_A Epidermal growth factor 100.0 5E-39 1.7E-43 354.6 14.2 260 678-985 14-279 (327)
165 2eue_A Carbon catabolite derep 100.0 1.4E-38 4.7E-43 342.7 17.3 247 678-977 12-262 (275)
166 3dls_A PAS domain-containing s 100.0 7.8E-39 2.7E-43 353.9 15.6 245 676-978 21-275 (335)
167 2buj_A Serine/threonine-protei 100.0 8.1E-39 2.8E-43 352.3 15.6 277 678-986 28-308 (317)
168 3hko_A Calcium/calmodulin-depe 100.0 1.4E-38 4.9E-43 354.9 17.7 267 674-977 21-330 (345)
169 3a62_A Ribosomal protein S6 ki 100.0 1.6E-38 5.6E-43 350.5 17.9 249 678-977 16-276 (327)
170 3c1x_A Hepatocyte growth facto 100.0 4.7E-39 1.6E-43 360.3 13.7 267 680-990 90-361 (373)
171 2xir_A Vascular endothelial gr 100.0 4.4E-39 1.5E-43 354.4 13.2 277 671-987 19-313 (316)
172 2r5t_A Serine/threonine-protei 100.0 5.8E-39 2E-43 358.5 14.4 251 678-979 37-291 (373)
173 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.1E-39 3.1E-43 368.3 16.4 262 678-989 183-445 (452)
174 3i6u_A CDS1, serine/threonine- 100.0 1.5E-38 5.2E-43 362.6 18.1 254 676-977 132-399 (419)
175 3mtl_A Cell division protein k 100.0 2.8E-39 9.7E-44 356.4 11.6 275 679-977 2-281 (324)
176 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.4E-39 8.3E-44 357.8 10.8 280 673-977 28-318 (329)
177 2yex_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 342.6 16.9 254 678-977 6-261 (276)
178 3cc6_A Protein tyrosine kinase 100.0 9.6E-39 3.3E-43 345.1 15.2 260 678-986 11-275 (281)
179 3pls_A Macrophage-stimulating 100.0 1.8E-38 6.3E-43 346.3 17.5 268 680-990 22-293 (298)
180 2pvf_A Fibroblast growth facto 100.0 3.1E-38 1.1E-42 350.0 19.6 267 678-986 34-320 (334)
181 3nsz_A CK II alpha, casein kin 100.0 2.6E-38 8.8E-43 350.5 18.7 272 679-977 36-319 (330)
182 1u5q_A Serine/threonine protei 100.0 1.7E-38 6E-43 352.6 17.3 247 679-978 54-306 (348)
183 2jii_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 358.7 13.3 273 679-987 42-339 (352)
184 1t4h_A Serine/threonine-protei 100.0 2.2E-38 7.7E-43 343.9 17.7 251 680-977 27-282 (290)
185 2acx_A G protein-coupled recep 100.0 1.5E-38 5E-43 369.4 17.2 254 678-977 183-444 (576)
186 3sv0_A Casein kinase I-like; t 100.0 8.4E-38 2.9E-42 359.8 23.3 272 678-986 6-280 (483)
187 1b6c_B TGF-B superfamily recep 100.0 1.3E-37 4.5E-42 346.7 24.1 282 670-988 33-340 (342)
188 3gxj_A TGF-beta receptor type- 100.0 6.4E-40 2.2E-44 358.8 5.2 271 679-986 3-299 (303)
189 3cok_A Serine/threonine-protei 100.0 2.7E-38 9.1E-43 341.1 17.5 251 677-977 9-262 (278)
190 3mdy_A Bone morphogenetic prot 100.0 3E-37 1E-41 343.1 26.4 282 671-986 29-333 (337)
191 4ejn_A RAC-alpha serine/threon 100.0 9.2E-39 3.2E-43 368.4 14.6 249 678-977 147-404 (446)
192 1mqb_A Ephrin type-A receptor 100.0 2E-38 6.8E-43 350.9 16.6 263 679-987 44-312 (333)
193 3fdn_A Serine/threonine-protei 100.0 2.4E-38 8.1E-43 341.6 16.8 248 678-978 8-258 (279)
194 1u59_A Tyrosine-protein kinase 100.0 2.7E-38 9.3E-43 342.6 17.3 265 679-990 9-278 (287)
195 1byg_A CSK, protein (C-termina 100.0 2.2E-38 7.6E-43 341.7 16.5 255 678-986 20-275 (278)
196 2h34_A Serine/threonine-protei 100.0 1.3E-38 4.5E-43 348.7 14.8 265 675-986 30-298 (309)
197 3bhy_A Death-associated protei 100.0 7.4E-38 2.5E-42 338.6 20.5 257 679-983 5-273 (283)
198 3ll6_A Cyclin G-associated kin 100.0 5.2E-38 1.8E-42 349.3 19.7 271 678-986 27-310 (337)
199 3kvw_A DYRK2, dual specificity 100.0 4.6E-38 1.6E-42 359.5 19.7 200 678-902 96-303 (429)
200 1ua2_A CAK, cell division prot 100.0 3.9E-38 1.3E-42 350.8 18.2 276 674-977 5-291 (346)
201 4aaa_A Cyclin-dependent kinase 100.0 1.3E-38 4.3E-43 352.7 14.2 278 678-978 24-307 (331)
202 1xbb_A Tyrosine-protein kinase 100.0 2.7E-38 9.4E-43 343.3 16.6 264 677-988 14-283 (291)
203 2y7j_A Phosphorylase B kinase 100.0 1.4E-37 4.7E-42 348.3 22.4 259 671-977 86-359 (365)
204 3dbq_A Dual specificity protei 100.0 1.2E-38 4.2E-43 354.4 13.7 252 678-978 8-274 (343)
205 2jam_A Calcium/calmodulin-depe 100.0 3E-38 1E-42 345.3 16.6 251 678-977 8-261 (304)
206 3bz5_A Internalin-J, INLJ; leu 100.0 2.1E-37 7.3E-42 356.1 24.2 359 66-582 34-392 (457)
207 1p4o_A Insulin-like growth fac 100.0 3.2E-39 1.1E-43 356.4 8.6 274 673-988 19-303 (322)
208 3pg1_A Mitogen-activated prote 100.0 8.7E-38 3E-42 350.9 20.3 288 670-977 13-316 (362)
209 3mi9_A Cell division protein k 100.0 8.7E-38 3E-42 349.2 20.2 282 678-977 16-311 (351)
210 3byv_A Rhoptry kinase; malaria 100.0 3.9E-39 1.3E-43 363.2 9.3 260 678-986 72-370 (377)
211 2clq_A Mitogen-activated prote 100.0 5.7E-38 2E-42 341.8 17.9 253 680-977 23-278 (295)
212 1j1b_A Glycogen synthase kinas 100.0 3.4E-38 1.2E-42 359.9 16.7 277 679-977 54-336 (420)
213 3mwu_A Calmodulin-domain prote 100.0 1E-37 3.6E-42 363.8 21.1 252 678-978 21-277 (486)
214 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.1E-38 2.1E-42 363.9 18.8 256 678-976 184-447 (543)
215 1fvr_A Tyrosine-protein kinase 100.0 5.9E-38 2E-42 346.8 17.8 264 679-987 25-303 (327)
216 3lij_A Calcium/calmodulin depe 100.0 8E-38 2.7E-42 365.3 19.6 252 678-978 36-292 (494)
217 2xrw_A Mitogen-activated prote 100.0 9.8E-38 3.3E-42 350.8 19.5 278 678-977 24-318 (371)
218 2w5a_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 344.2 11.5 259 678-980 5-270 (279)
219 2x7f_A TRAF2 and NCK-interacti 100.0 4.1E-38 1.4E-42 348.2 16.0 264 671-977 16-286 (326)
220 2zmd_A Dual specificity protei 100.0 3.3E-38 1.1E-42 356.3 15.4 251 679-978 56-321 (390)
221 3eqc_A Dual specificity mitoge 100.0 2.4E-38 8.2E-43 355.0 14.2 200 678-901 32-233 (360)
222 3lm5_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 348.6 14.6 265 667-977 16-287 (327)
223 2vgo_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 336.8 19.0 247 678-977 13-262 (284)
224 2fst_X Mitogen-activated prote 100.0 1.3E-38 4.4E-43 356.1 11.3 277 678-977 28-311 (367)
225 2rku_A Serine/threonine-protei 100.0 8.7E-38 3E-42 340.0 17.3 250 678-978 14-266 (294)
226 3com_A Serine/threonine-protei 100.0 1E-37 3.6E-42 343.0 18.1 253 676-977 26-278 (314)
227 4e7w_A Glycogen synthase kinas 100.0 6.9E-38 2.4E-42 354.4 17.1 276 679-977 40-321 (394)
228 3bz5_A Internalin-J, INLJ; leu 100.0 7.6E-37 2.6E-41 351.5 25.9 360 84-600 28-387 (457)
229 3q5i_A Protein kinase; CDPK, m 100.0 2E-37 6.7E-42 363.0 21.4 252 677-977 34-301 (504)
230 1o6v_A Internalin A; bacterial 100.0 1.4E-36 4.7E-41 352.8 28.3 191 72-305 44-234 (466)
231 2owb_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42 346.9 16.7 249 678-977 40-291 (335)
232 3a7i_A MST3 kinase, serine/thr 100.0 2.4E-37 8.1E-42 338.2 20.5 250 678-978 21-271 (303)
233 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.7E-38 1.6E-42 353.1 15.2 259 677-986 63-341 (365)
234 2yfx_A Tyrosine-protein kinase 100.0 6.1E-38 2.1E-42 346.7 15.7 266 678-985 29-305 (327)
235 2ycf_A Serine/threonine-protei 100.0 1.2E-37 4E-42 343.6 17.9 253 677-977 8-274 (322)
236 2h8h_A Proto-oncogene tyrosine 100.0 3.5E-38 1.2E-42 370.6 14.5 262 678-989 266-528 (535)
237 2j7t_A Serine/threonine-protei 100.0 2.5E-38 8.7E-43 345.8 12.2 253 678-977 18-275 (302)
238 3nyv_A Calmodulin-domain prote 100.0 5.9E-38 2E-42 366.1 15.7 251 678-977 25-281 (484)
239 2i6l_A Mitogen-activated prote 100.0 8E-38 2.7E-42 345.0 15.9 279 678-977 10-305 (320)
240 3e3p_A Protein kinase, putativ 100.0 2.3E-37 7.7E-42 347.4 19.7 289 671-977 15-314 (360)
241 2h6d_A 5'-AMP-activated protei 100.0 1.7E-37 5.8E-42 334.4 17.8 249 678-978 10-262 (276)
242 2r3i_A Cell division protein k 100.0 5.6E-38 1.9E-42 342.6 14.2 276 678-977 2-283 (299)
243 1o6v_A Internalin A; bacterial 100.0 2.6E-36 9E-41 350.4 29.2 347 147-581 46-392 (466)
244 2ozo_A Tyrosine-protein kinase 100.0 8.7E-38 3E-42 372.3 16.7 256 686-988 343-602 (613)
245 2b9h_A MAP kinase FUS3, mitoge 100.0 9.4E-38 3.2E-42 349.5 16.0 280 678-977 10-305 (353)
246 4fl3_A Tyrosine-protein kinase 100.0 1.7E-37 5.6E-42 370.6 18.9 255 685-987 375-634 (635)
247 1x8b_A WEE1HU, WEE1-like prote 100.0 1.3E-37 4.6E-42 337.8 16.4 248 677-977 9-279 (289)
248 2wtk_C Serine/threonine-protei 100.0 4.9E-37 1.7E-41 336.1 20.7 256 677-978 3-264 (305)
249 3q60_A ROP5B; pseudokinase, tr 100.0 5.6E-38 1.9E-42 353.1 13.3 260 678-977 61-352 (371)
250 3pfq_A PKC-B, PKC-beta, protei 100.0 2.5E-37 8.4E-42 371.7 19.6 250 677-977 339-597 (674)
251 1wak_A Serine/threonine-protei 100.0 3.8E-37 1.3E-41 350.8 20.1 278 678-977 36-391 (397)
252 1u46_A ACK-1, activated CDC42 100.0 8.5E-38 2.9E-42 339.7 13.9 262 678-985 17-285 (291)
253 1phk_A Phosphorylase kinase; g 100.0 4.2E-37 1.4E-41 335.4 19.2 254 676-977 14-283 (298)
254 2vx3_A Dual specificity tyrosi 100.0 2.5E-37 8.7E-42 349.1 18.0 203 676-901 51-261 (382)
255 1blx_A Cyclin-dependent kinase 100.0 2.8E-37 9.5E-42 341.6 17.6 280 676-977 8-296 (326)
256 3fme_A Dual specificity mitoge 100.0 7.4E-38 2.5E-42 340.0 12.4 255 678-977 6-266 (290)
257 2vwi_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 345.1 9.0 272 676-977 12-287 (303)
258 1z57_A Dual specificity protei 100.0 7.4E-37 2.5E-41 340.3 19.8 274 678-977 13-328 (339)
259 1vzo_A Ribosomal protein S6 ki 100.0 1.6E-37 5.4E-42 346.6 14.3 255 678-978 53-322 (355)
260 4exu_A Mitogen-activated prote 100.0 2.4E-37 8.3E-42 347.6 15.4 276 678-977 41-323 (371)
261 3rgf_A Cyclin-dependent kinase 100.0 6.8E-37 2.3E-41 348.5 18.4 210 679-902 20-240 (405)
262 3an0_A Dual specificity mitoge 100.0 1.8E-37 6E-42 345.1 12.4 255 678-977 50-310 (340)
263 2wei_A Calmodulin-domain prote 100.0 1.2E-36 4.2E-41 329.6 18.0 254 675-977 18-276 (287)
264 2id5_A Lingo-1, leucine rich r 100.0 2E-36 6.8E-41 353.2 21.0 329 148-582 33-361 (477)
265 1zy4_A Serine/threonine-protei 100.0 5.9E-37 2E-41 335.2 15.4 265 677-977 4-283 (303)
266 3fhr_A MAP kinase-activated pr 100.0 9.7E-37 3.3E-41 337.7 16.5 257 678-977 27-287 (336)
267 3oja_B Anopheles plasmodium-re 100.0 2.5E-36 8.7E-41 361.3 21.1 177 23-232 4-184 (597)
268 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.4E-37 1.2E-41 339.8 12.4 263 677-986 31-304 (319)
269 2j0j_A Focal adhesion kinase 1 100.0 9.8E-37 3.3E-41 365.4 16.3 259 678-985 389-652 (656)
270 2pml_X PFPK7, Ser/Thr protein 100.0 3.5E-37 1.2E-41 344.1 11.0 265 678-977 30-322 (348)
271 2eu9_A Dual specificity protei 100.0 3.5E-36 1.2E-40 337.2 19.0 274 678-977 18-333 (355)
272 3coi_A Mitogen-activated prote 100.0 1.1E-36 3.7E-41 340.4 14.1 275 679-977 24-305 (353)
273 1q8y_A SR protein kinase; tran 100.0 2E-36 6.7E-41 341.6 15.6 278 678-977 18-333 (373)
274 3a99_A Proto-oncogene serine/t 100.0 1.6E-36 5.6E-41 333.7 14.6 243 676-977 40-293 (320)
275 3cek_A Dual specificity protei 100.0 1.8E-36 6.3E-41 332.7 14.5 256 674-978 23-293 (313)
276 2iwi_A Serine/threonine-protei 100.0 2.8E-36 9.6E-41 331.1 15.5 246 673-977 25-283 (312)
277 3qa8_A MGC80376 protein; kinas 100.0 1.7E-36 5.7E-41 355.0 14.2 286 677-983 12-308 (676)
278 3o6n_A APL1; leucine-rich repe 100.0 4.2E-35 1.4E-39 332.4 24.2 349 28-457 3-353 (390)
279 3aln_A Dual specificity mitoge 100.0 2.8E-36 9.4E-41 333.5 12.1 259 678-977 21-285 (327)
280 2dyl_A Dual specificity mitoge 100.0 7.4E-36 2.5E-40 328.9 14.4 252 678-977 24-283 (318)
281 4fcg_A Uncharacterized protein 100.0 1.1E-35 3.8E-40 327.1 15.4 274 4-307 23-316 (328)
282 2rio_A Serine/threonine-protei 100.0 1.8E-35 6E-40 339.0 16.8 257 680-977 16-295 (434)
283 3o6n_A APL1; leucine-rich repe 100.0 5E-35 1.7E-39 331.8 19.6 174 396-605 206-379 (390)
284 3uqc_A Probable conserved tran 100.0 3E-35 1E-39 317.1 15.4 232 679-986 31-267 (286)
285 3p23_A Serine/threonine-protei 100.0 3.6E-35 1.2E-39 335.0 14.2 250 679-977 24-283 (432)
286 3dzo_A Rhoptry kinase domain; 100.0 7.7E-35 2.6E-39 331.3 15.1 251 678-977 77-363 (413)
287 1ogq_A PGIP-2, polygalacturona 100.0 1E-34 3.5E-39 317.6 15.3 256 348-605 51-309 (313)
288 2pzi_A Probable serine/threoni 100.0 1.1E-34 3.8E-39 351.8 16.2 248 679-986 80-330 (681)
289 3m2w_A MAP kinase-activated pr 100.0 4.2E-34 1.4E-38 311.4 17.8 236 678-977 16-256 (299)
290 4fmz_A Internalin; leucine ric 100.0 1.6E-32 5.6E-37 306.0 24.8 307 167-577 40-346 (347)
291 3oja_B Anopheles plasmodium-re 100.0 6.6E-33 2.3E-37 331.7 20.9 334 243-603 50-383 (597)
292 4fmz_A Internalin; leucine ric 100.0 2.4E-32 8.1E-37 304.7 23.9 306 70-431 40-345 (347)
293 2vuw_A Serine/threonine-protei 100.0 4.3E-33 1.5E-37 308.9 16.4 247 678-976 19-329 (336)
294 2ft3_A Biglycan; proteoglycan, 100.0 6.2E-32 2.1E-36 298.9 22.5 290 148-575 34-331 (332)
295 1xku_A Decorin; proteoglycan, 100.0 2.3E-31 7.9E-36 294.2 22.6 125 149-304 33-157 (330)
296 2ft3_A Biglycan; proteoglycan, 100.0 4.3E-31 1.5E-35 292.2 23.6 292 53-406 36-331 (332)
297 1xku_A Decorin; proteoglycan, 100.0 8.4E-31 2.9E-35 289.7 25.2 193 55-306 36-230 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 4.6E-35 1.6E-39 340.5 -14.5 358 74-433 3-412 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.5E-34 5E-39 336.3 -13.7 365 147-554 3-412 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 1.1E-29 3.9E-34 283.4 15.5 288 29-339 21-318 (353)
301 3zyj_A Leucine-rich repeat-con 100.0 3E-29 1E-33 288.7 18.1 258 348-607 65-324 (440)
302 2z66_A Variable lymphocyte rec 100.0 6.7E-30 2.3E-34 279.3 11.8 215 367-607 74-294 (306)
303 4fcg_A Uncharacterized protein 100.0 5E-31 1.7E-35 290.0 2.4 289 11-337 15-316 (328)
304 1ozn_A Reticulon 4 receptor; N 100.0 3.5E-29 1.2E-33 270.5 16.2 236 347-607 32-268 (285)
305 3zyi_A Leucine-rich repeat-con 100.0 3.8E-29 1.3E-33 288.9 17.4 239 348-588 76-314 (452)
306 2z80_A TOLL-like receptor 2, v 100.0 4.1E-29 1.4E-33 278.8 13.6 191 367-582 120-319 (353)
307 3g06_A SSPH2 (leucine-rich rep 100.0 7.1E-29 2.4E-33 293.1 14.5 294 25-443 9-308 (622)
308 3ogk_B Coronatine-insensitive 100.0 1.5E-31 5.1E-36 321.4 -9.8 189 35-229 39-253 (592)
309 1wwl_A Monocyte differentiatio 100.0 7.8E-30 2.7E-34 279.0 4.2 268 28-336 21-310 (312)
310 2z66_A Variable lymphocyte rec 100.0 1.9E-28 6.3E-33 267.8 14.4 248 38-304 7-260 (306)
311 3ogk_B Coronatine-insensitive 100.0 2.4E-30 8.2E-35 310.9 -3.4 427 89-571 64-545 (592)
312 3zyi_A Leucine-rich repeat-con 99.9 2E-27 7E-32 274.4 18.8 251 349-605 56-308 (452)
313 3zyj_A Leucine-rich repeat-con 99.9 1.8E-27 6.2E-32 273.8 18.0 252 348-605 44-297 (440)
314 3oja_A Leucine-rich immune mol 99.9 7.4E-29 2.5E-33 287.7 6.0 243 323-605 35-287 (487)
315 1wwl_A Monocyte differentiatio 99.9 9.6E-29 3.3E-33 270.3 5.0 255 69-362 38-311 (312)
316 3g06_A SSPH2 (leucine-rich rep 99.9 1.6E-26 5.4E-31 273.0 21.8 268 75-467 41-308 (622)
317 4azs_A Methyltransferase WBDD; 99.9 2.3E-28 7.8E-33 287.2 3.5 186 686-897 241-437 (569)
318 1ozn_A Reticulon 4 receptor; N 99.9 1.6E-26 5.4E-31 249.6 17.4 196 362-583 71-267 (285)
319 3o53_A Protein LRIM1, AGAP0063 99.9 1.2E-27 4.1E-32 262.3 4.3 250 262-581 28-280 (317)
320 3o53_A Protein LRIM1, AGAP0063 99.9 1.8E-27 6.3E-32 260.8 5.1 257 197-524 12-270 (317)
321 2p1m_B Transport inhibitor res 99.9 1.6E-29 5.4E-34 304.0 -13.5 459 36-576 33-543 (594)
322 2z62_A TOLL-like receptor 4, v 99.9 1.1E-25 3.8E-30 241.7 17.7 213 347-585 28-245 (276)
323 3oja_A Leucine-rich immune mol 99.9 3.5E-26 1.2E-30 265.2 10.8 224 368-605 31-255 (487)
324 2o6q_A Variable lymphocyte rec 99.9 3.7E-25 1.3E-29 236.5 16.6 217 35-281 2-218 (270)
325 2o6q_A Variable lymphocyte rec 99.9 1.7E-24 5.9E-29 231.3 20.4 206 349-582 18-223 (270)
326 1p9a_G Platelet glycoprotein I 99.9 5.6E-25 1.9E-29 237.0 16.0 202 348-581 11-212 (290)
327 2z62_A TOLL-like receptor 4, v 99.9 1E-24 3.4E-29 234.2 16.4 224 353-605 13-242 (276)
328 2p1m_B Transport inhibitor res 99.9 8.1E-28 2.8E-32 289.1 -8.8 90 487-577 427-519 (594)
329 1p9a_G Platelet glycoprotein I 99.9 5.3E-24 1.8E-28 229.4 17.6 206 367-603 6-211 (290)
330 3en9_A Glycoprotease, O-sialog 99.9 1.5E-24 5.2E-29 253.3 10.7 193 680-899 337-539 (540)
331 3m19_A Variable lymphocyte rec 99.9 1.4E-23 4.9E-28 221.5 15.4 193 35-234 2-194 (251)
332 3rfs_A Internalin B, repeat mo 99.9 6.9E-24 2.4E-28 226.8 11.9 181 368-582 60-240 (272)
333 3rfs_A Internalin B, repeat mo 99.9 1.3E-22 4.4E-27 216.9 16.7 202 243-457 18-219 (272)
334 3m19_A Variable lymphocyte rec 99.9 2.7E-22 9.4E-27 211.7 17.7 181 372-580 15-195 (251)
335 4glp_A Monocyte differentiatio 99.9 4.8E-23 1.7E-27 224.9 12.0 200 348-578 92-308 (310)
336 3goz_A Leucine-rich repeat-con 99.9 2.9E-24 1E-28 240.1 2.3 86 78-163 2-96 (362)
337 3goz_A Leucine-rich repeat-con 99.9 2.7E-24 9.1E-29 240.4 0.9 268 55-343 3-305 (362)
338 2xwt_C Thyrotropin receptor; s 99.9 1.7E-22 5.9E-27 211.6 14.4 200 347-574 31-236 (239)
339 2ast_B S-phase kinase-associat 99.9 2.4E-24 8.2E-29 238.8 -1.3 273 34-369 33-315 (336)
340 4glp_A Monocyte differentiatio 99.9 1.3E-22 4.3E-27 221.6 11.8 226 75-335 65-307 (310)
341 2xwt_C Thyrotropin receptor; s 99.9 2.1E-22 7.1E-27 211.0 12.7 206 359-598 23-237 (239)
342 2ca6_A RAN GTPase-activating p 99.9 2.7E-24 9.2E-29 243.0 -3.2 258 259-581 23-320 (386)
343 3cvr_A Invasion plasmid antige 99.9 2.6E-22 8.8E-27 234.0 11.9 208 28-291 33-253 (571)
344 2ast_B S-phase kinase-associat 99.9 9.8E-23 3.3E-27 225.8 5.5 254 100-393 49-315 (336)
345 1zar_A RIO2 kinase; serine kin 99.9 6.1E-22 2.1E-26 211.6 10.5 162 674-883 85-274 (282)
346 1h6u_A Internalin H; cell adhe 99.9 2.5E-21 8.5E-26 210.7 14.4 191 349-580 43-233 (308)
347 4ay9_X Follicle-stimulating ho 99.9 2.7E-21 9.4E-26 214.7 14.5 242 38-332 9-256 (350)
348 1h6u_A Internalin H; cell adhe 99.8 2.7E-21 9.4E-26 210.3 13.6 148 72-232 39-186 (308)
349 2ca6_A RAN GTPase-activating p 99.8 6.4E-23 2.2E-27 231.7 0.6 166 66-232 24-229 (386)
350 4ay9_X Follicle-stimulating ho 99.8 6.9E-21 2.4E-25 211.5 16.2 241 77-358 12-257 (350)
351 2v9t_B SLIT homolog 2 protein 99.8 2.3E-21 7.8E-26 199.6 9.6 125 483-607 71-195 (220)
352 2v70_A SLIT-2, SLIT homolog 2 99.8 3.7E-21 1.3E-25 198.0 9.5 130 477-606 66-195 (220)
353 4b8c_D Glucose-repressible alc 99.8 1.3E-21 4.3E-26 237.3 6.8 240 5-278 129-369 (727)
354 2o6s_A Variable lymphocyte rec 99.8 1.1E-20 3.9E-25 193.1 11.2 181 37-240 6-186 (208)
355 2o6s_A Variable lymphocyte rec 99.8 1E-19 3.6E-24 185.9 16.2 181 77-269 10-190 (208)
356 3e6j_A Variable lymphocyte rec 99.8 5.8E-20 2E-24 190.5 14.4 163 29-208 10-172 (229)
357 3cvr_A Invasion plasmid antige 99.8 3.7E-20 1.3E-24 215.8 14.0 190 322-565 59-255 (571)
358 2xot_A Amphoterin-induced prot 99.8 4.7E-20 1.6E-24 205.6 12.6 181 374-582 21-207 (361)
359 1dce_A Protein (RAB geranylger 99.8 1.1E-21 3.6E-26 230.4 -5.6 221 39-308 286-549 (567)
360 2xot_A Amphoterin-induced prot 99.8 1.4E-19 4.7E-24 201.8 10.2 179 398-604 21-206 (361)
361 3e6j_A Variable lymphocyte rec 99.8 6.6E-19 2.3E-23 182.5 14.5 95 486-581 82-176 (229)
362 1h6t_A Internalin B; cell adhe 99.8 2.6E-19 8.9E-24 192.9 9.9 186 353-579 30-215 (291)
363 1h6t_A Internalin B; cell adhe 99.8 5.9E-19 2E-23 190.1 12.4 174 71-284 43-216 (291)
364 2v9t_B SLIT homolog 2 protein 99.8 1E-18 3.6E-23 179.7 12.6 153 374-554 14-166 (220)
365 2v70_A SLIT-2, SLIT homolog 2 99.8 1E-18 3.4E-23 179.8 11.7 156 374-557 14-170 (220)
366 1w8a_A SLIT protein; signaling 99.8 4.1E-19 1.4E-23 178.5 7.9 120 488-607 50-169 (192)
367 1m9s_A Internalin B; cell inva 99.8 1.8E-18 6.2E-23 204.1 14.2 177 71-287 40-216 (605)
368 1m9s_A Internalin B; cell inva 99.8 2.8E-18 9.6E-23 202.5 14.9 202 170-443 20-221 (605)
369 1zth_A RIO1 serine protein kin 99.8 2.5E-18 8.6E-23 181.5 11.9 137 681-840 49-219 (258)
370 1dce_A Protein (RAB geranylger 99.7 1.2E-20 4.2E-25 221.4 -6.9 192 369-584 347-553 (567)
371 2wfh_A SLIT homolog 2 protein 99.7 2.4E-18 8.3E-23 172.7 8.1 158 422-608 13-170 (193)
372 4b8c_D Glucose-repressible alc 99.7 1.4E-18 4.8E-23 210.6 6.1 189 353-577 207-404 (727)
373 3sb4_A Hypothetical leucine ri 99.7 2.6E-18 8.8E-23 189.0 7.4 156 64-226 13-184 (329)
374 4ezg_A Putative uncharacterize 99.7 9.1E-18 3.1E-22 169.6 10.4 154 71-232 41-194 (197)
375 4ezg_A Putative uncharacterize 99.7 2.4E-17 8.3E-22 166.5 13.1 154 94-305 40-194 (197)
376 1xeu_A Internalin C; cellular 99.7 1E-17 3.5E-22 177.3 10.6 166 52-233 21-186 (263)
377 1xeu_A Internalin C; cellular 99.7 9.3E-18 3.2E-22 177.7 9.3 174 72-286 17-190 (263)
378 1w8a_A SLIT protein; signaling 99.7 2.8E-17 9.6E-22 165.1 12.3 176 398-605 11-188 (192)
379 3sb4_A Hypothetical leucine ri 99.7 1.7E-17 5.7E-22 182.5 6.9 197 243-449 100-327 (329)
380 2wfh_A SLIT homolog 2 protein 99.6 5.1E-16 1.7E-20 155.8 11.1 130 472-605 14-144 (193)
381 2ell_A Acidic leucine-rich nuc 99.6 8.2E-16 2.8E-20 150.9 11.1 135 419-580 24-163 (168)
382 2ell_A Acidic leucine-rich nuc 99.6 1.1E-15 3.6E-20 150.1 10.8 134 72-208 22-160 (168)
383 2o6r_A Variable lymphocyte rec 99.6 2E-15 6.8E-20 149.5 11.0 109 474-582 34-142 (177)
384 2je0_A Acidic leucine-rich nuc 99.6 1.2E-15 4.1E-20 146.4 8.4 128 419-573 17-149 (149)
385 4gyi_A RIO2 kinase; protein ki 99.6 4.9E-16 1.7E-20 169.2 4.6 136 680-840 96-265 (397)
386 4fdw_A Leucine rich hypothetic 99.6 3.4E-14 1.2E-18 159.2 17.5 252 262-576 130-382 (401)
387 2je0_A Acidic leucine-rich nuc 99.6 5.5E-15 1.9E-19 141.7 9.0 128 147-300 17-148 (149)
388 4fdw_A Leucine rich hypothetic 99.5 5.2E-14 1.8E-18 157.7 17.4 198 349-580 159-361 (401)
389 2o6r_A Variable lymphocyte rec 99.5 2.1E-14 7.1E-19 142.2 12.0 83 38-135 7-89 (177)
390 1ds9_A Outer arm dynein; leuci 99.5 2.6E-16 8.8E-21 159.1 -3.3 153 72-232 16-185 (198)
391 3g39_A Variable lymphocyte rec 99.5 1.7E-14 5.7E-19 141.4 9.4 108 472-582 13-120 (170)
392 1ds9_A Outer arm dynein; leuci 99.5 1.6E-16 5.6E-21 160.5 -5.5 89 485-577 86-185 (198)
393 4fs7_A Uncharacterized protein 99.5 3.3E-13 1.1E-17 152.1 19.4 238 262-569 156-393 (394)
394 2r9u_A Variable lymphocyte rec 99.5 3.5E-14 1.2E-18 139.6 9.4 108 472-582 16-123 (174)
395 1a9n_A U2A', U2A'; complex (nu 99.5 1.4E-14 4.7E-19 143.3 6.5 91 486-578 58-154 (176)
396 1a9n_A U2A', U2A'; complex (nu 99.5 1.2E-14 4.1E-19 143.6 6.1 133 69-232 14-153 (176)
397 4fs7_A Uncharacterized protein 99.5 6.9E-13 2.4E-17 149.5 19.1 149 363-545 245-393 (394)
398 3g39_A Variable lymphocyte rec 99.4 2.6E-13 8.8E-18 132.9 9.9 109 493-604 10-119 (170)
399 2r9u_A Variable lymphocyte rec 99.4 4.7E-13 1.6E-17 131.5 10.1 108 494-604 14-122 (174)
400 2ifg_A High affinity nerve gro 99.4 2.4E-13 8.4E-18 150.6 6.7 130 473-605 13-146 (347)
401 3un9_A NLR family member X1; l 99.3 3.9E-14 1.3E-18 157.2 -5.8 135 97-231 71-223 (372)
402 4gt6_A Cell surface protein; l 99.2 1.5E-10 5.2E-15 130.2 19.5 42 509-551 327-368 (394)
403 3un9_A NLR family member X1; l 99.2 3.8E-13 1.3E-17 149.2 -2.3 160 394-578 71-253 (372)
404 2ifg_A High affinity nerve gro 99.2 1.6E-11 5.5E-16 135.9 10.2 133 422-582 11-146 (347)
405 3tm0_A Aminoglycoside 3'-phosp 99.2 4.3E-11 1.5E-15 126.7 11.5 147 674-838 9-212 (263)
406 4gt6_A Cell surface protein; l 99.2 1.3E-09 4.4E-14 122.6 23.7 84 362-448 256-339 (394)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 5.6E-10 1.9E-14 118.0 6.9 137 679-838 20-213 (264)
408 4h09_A Hypothetical leucine ri 98.9 3.6E-08 1.2E-12 110.3 20.8 163 370-563 193-355 (379)
409 2ra8_A Uncharacterized protein 98.9 4.4E-10 1.5E-14 123.3 4.1 180 50-232 107-320 (362)
410 2ra8_A Uncharacterized protein 98.9 7E-10 2.4E-14 121.7 4.6 183 367-575 135-341 (362)
411 4h09_A Hypothetical leucine ri 98.8 1.7E-07 5.9E-12 104.6 21.7 147 364-540 210-356 (379)
412 3dxp_A Putative acyl-COA dehyd 98.8 7.1E-09 2.4E-13 115.0 9.7 145 683-839 42-248 (359)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 4.3E-09 1.5E-13 113.7 6.2 195 684-898 25-287 (304)
414 3rw6_A Nuclear RNA export fact 98.7 5E-10 1.7E-14 116.2 -2.4 98 37-135 77-209 (267)
415 3rw6_A Nuclear RNA export fact 98.5 2.6E-08 8.8E-13 103.3 3.1 80 489-570 167-257 (267)
416 3r70_A Aminoglycoside phosphot 98.4 6.2E-07 2.1E-11 97.4 11.3 136 680-839 38-237 (320)
417 1io0_A Tropomodulin; LRR prote 98.4 1.5E-08 5.1E-13 100.2 -3.4 46 66-111 28-78 (185)
418 3d1u_A Putative fructosamine-3 98.3 3.1E-06 1.1E-10 89.8 12.1 76 683-768 19-97 (288)
419 1io0_A Tropomodulin; LRR prote 98.3 1.8E-07 6E-12 92.4 1.6 93 485-577 58-164 (185)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 3.3E-06 1.1E-10 89.3 11.3 135 686-838 31-222 (272)
421 3tdw_A Gentamicin resistance p 98.2 7.1E-06 2.4E-10 88.2 11.9 137 684-839 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.3E-05 4.6E-10 88.1 10.6 78 681-769 43-122 (362)
423 3ats_A Putative uncharacterize 98.0 1.1E-05 3.6E-10 89.2 9.4 84 684-769 25-121 (357)
424 2olc_A MTR kinase, methylthior 97.9 3.9E-05 1.3E-09 85.9 11.1 76 684-766 35-120 (397)
425 3rfe_A Platelet glycoprotein I 97.9 9.3E-06 3.2E-10 74.3 4.8 87 519-607 11-100 (130)
426 3e4g_A ATP synthase subunit S, 97.7 1.1E-05 3.8E-10 77.2 1.7 84 492-575 61-150 (176)
427 3f7w_A Putative fructosamine-3 97.6 0.0002 6.7E-09 76.1 11.4 77 681-767 17-96 (288)
428 2q83_A YTAA protein; 2635576, 97.6 0.00015 5.1E-09 79.4 10.6 148 685-838 38-251 (346)
429 3e4g_A ATP synthase subunit S, 97.6 1.7E-05 5.8E-10 75.9 1.4 34 99-132 62-95 (176)
430 3jr1_A Putative fructosamine-3 97.4 0.00062 2.1E-08 72.6 10.5 142 683-835 40-232 (312)
431 1pgv_A TMD-1, tropomodulin TMD 97.3 1.6E-05 5.4E-10 77.7 -2.9 122 66-208 33-170 (197)
432 2pyw_A Uncharacterized protein 97.2 0.00071 2.4E-08 76.1 9.7 77 809-895 232-313 (420)
433 1pgv_A TMD-1, tropomodulin TMD 97.2 9.7E-05 3.3E-09 72.1 1.5 74 261-334 91-169 (197)
434 3dxq_A Choline/ethanolamine ki 97.1 0.0016 5.4E-08 69.5 10.6 72 683-768 22-95 (301)
435 2ppq_A HSK, HK, homoserine kin 97.0 0.0031 1E-07 68.0 11.3 166 668-838 6-216 (322)
436 1zyl_A Hypothetical protein YI 96.8 0.0068 2.3E-07 65.5 12.6 167 666-839 8-223 (328)
437 2qg7_A Ethanolamine kinase PV0 96.8 0.0067 2.3E-07 68.3 12.4 75 684-768 113-188 (458)
438 3feg_A Choline/ethanolamine ki 96.7 0.0045 1.5E-07 67.8 9.9 144 684-838 55-253 (379)
439 3csv_A Aminoglycoside phosphot 96.6 0.014 4.9E-07 63.0 13.5 144 685-839 24-217 (333)
440 3rfe_A Platelet glycoprotein I 96.5 0.0026 9E-08 57.9 5.5 57 495-553 11-68 (130)
441 1nw1_A Choline kinase (49.2 KD 96.4 0.012 4E-07 66.1 10.9 73 684-767 78-158 (429)
442 3c5i_A Choline kinase; choline 96.4 0.0051 1.7E-07 67.8 7.9 73 685-767 39-120 (369)
443 2yle_A Protein spire homolog 1 96.1 0.042 1.4E-06 53.7 11.6 103 766-897 33-135 (229)
444 3i1a_A Spectinomycin phosphotr 95.7 0.014 4.8E-07 63.2 7.2 31 809-839 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.6 0.051 1.7E-06 59.6 11.1 144 685-838 58-279 (401)
446 3mes_A Choline kinase; malaria 94.5 0.12 4.3E-06 57.2 10.4 74 685-768 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 90.8 0.8 2.7E-05 50.5 10.2 29 811-839 246-280 (401)
448 4ann_A ESSB; membrane protein, 80.0 1.5 5.1E-05 42.8 4.4 83 783-901 77-160 (215)
449 4ano_A ESSB; membrane protein, 74.2 5.6 0.00019 38.9 6.7 82 783-900 81-164 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 70.0 0.47 1.6E-05 53.3 -2.4 61 682-745 145-213 (463)
451 2ks1_B Epidermal growth factor 54.0 1.9 6.5E-05 29.9 -0.8 10 643-652 31-40 (44)
452 2l2t_A Receptor tyrosine-prote 43.2 7.2 0.00025 27.0 0.8 9 644-652 31-39 (44)
453 2lz0_A Uncharacterized protein 41.0 61 0.0021 27.1 6.5 46 358-404 7-52 (100)
454 2k1k_A Ephrin type-A receptor 37.4 8.5 0.00029 25.7 0.4 15 635-649 23-37 (38)
455 2lz0_A Uncharacterized protein 32.1 61 0.0021 27.1 5.0 42 507-549 11-52 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.2e-80 Score=759.62 Aligned_cols=603 Identities=29% Similarity=0.466 Sum_probs=468.9
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCCCCcCCCCCCceEeeEEcCCCCeEEEeeccccccCCc---cC------------
Q 037275 3 VPSNETDRLALLAIGSQLEDDPLGVTSSWNNSTNLCQWTGVTCGHRHQRVTKLDLSNRTIGGT---LS------------ 67 (992)
Q Consensus 3 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~---l~------------ 67 (992)
..+.++||+|||+||+++. ||. .+++|+.++|||+|.||+|+ .++|+.|||+++.+.|. +|
T Consensus 7 ~~~~~~~~~all~~k~~~~-~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLP-DKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCS-CTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred ccCCHHHHHHHHHHHhhCC-Ccc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 4567899999999999996 777 89999989999999999998 68999999999998876 44
Q ss_pred -----------CCCCCCCcCCeeeccCCCCCccCCc--cccCCCCCCEEEeecccCCCCCCccc-ccCCCCcEeeccccc
Q 037275 68 -----------PYVGNLSFLRYLNLADNNFHGEIPH--QIGRLVRLEALVLANNSFSGKIPTNL-SRCSNLISFNARRNN 133 (992)
Q Consensus 68 -----------~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~L~l~~n~ 133 (992)
+.++.+++|++|||++|.+.|.+|. .++.+++|++|+|++|.+++.+|..+ .++++|++|++++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 5778888888999999888888888 88888888888888888887777765 677777777777777
Q ss_pred ccccCChhh--c----------------------ccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCC
Q 037275 134 LVGEIPAEL--G----------------------YNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPN 189 (992)
Q Consensus 134 l~~~~p~~~--~----------------------~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 189 (992)
+++..|..+ . ..+++|++|+|++|.+++.+|. ++++++|++|++++|.+.+.+|.
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccH
Confidence 775555431 1 2455666666666666665555 77777777777777777767777
Q ss_pred ccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhcccc
Q 037275 190 NLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASN 269 (992)
Q Consensus 190 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~ 269 (992)
.|+++++|++|+|++|++++.+|.. .+++|++|++++|++++.+|..++..+++|++|++++|++.+.+|..|+++++
T Consensus 242 ~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~ 319 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSL 319 (768)
T ss_dssp HTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTT
T ss_pred HHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCC
Confidence 7777777777777777777665554 66777777777777777777777766688888888888888888888888888
Q ss_pred Cceeeecccccccccccc-ccccCccceEecCCCCCCCCCCCCchhhh-------------------hccC--CCcceEe
Q 037275 270 LVELTLFDNQFRGKVSIY-FRSLKNLEWLNLGSNNLGTGEANDLDFLT-------------------LLTN--CTELTAI 327 (992)
Q Consensus 270 L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~~-------------------~l~~--~~~L~~L 327 (992)
|++|++++|++++.++.. |..+++|++|+|++|+++..-+..+..+. .+.. +++|+.|
T Consensus 320 L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L 399 (768)
T 3rgz_A 320 LESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399 (768)
T ss_dssp CCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEE
T ss_pred ccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEE
Confidence 888888888888666654 88888888888888887633222222211 1111 4556666
Q ss_pred ecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccc
Q 037275 328 GLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFL 407 (992)
Q Consensus 328 ~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 407 (992)
++++|++.+.+|..+..+. +|+.|++++|++++.+|..+..+++|++|++++|++++.+|..+..+++|++|+|++|++
T Consensus 400 ~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 400 YLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp ECCSSEEEEECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred ECCCCccccccCHHHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 6666666666666666654 477777777777777777777777777777777777767777777777777777777777
Q ss_pred cccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccc-
Q 037275 408 AGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPL- 486 (992)
Q Consensus 408 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~- 486 (992)
++.+|..+.++++|++|+|++|++++.+|.+++.+++|++|++++|++++.+|..+... +.++.|++++|.++|.+|.
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC-RSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGC-TTCCEEECCSSEEESBCCGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCC-CCCCEEECCCCccCCcCChH
Confidence 77777777777777777777777777777777777777777777777777666665543 3344667777776665554
Q ss_pred ---------------------------------------------------------------------cccCCCCccEE
Q 037275 487 ---------------------------------------------------------------------EVGNLKNLVYF 497 (992)
Q Consensus 487 ---------------------------------------------------------------------~~~~l~~L~~L 497 (992)
.++.+++|++|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 34456789999
Q ss_pred eeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCc
Q 037275 498 NISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFE 577 (992)
Q Consensus 498 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 577 (992)
||++|+++|.+|..|+.+++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|++||+++|+++
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccCCcccccccCCCCcCCCCCCCCCCCCCCCCCC
Q 037275 578 GEVPTKGVFSNKTGISLSGNGKVCGGLDELNLPPCPSRGLK 618 (992)
Q Consensus 578 ~~~~~~~~~~~~~~~~l~~N~~~C~~~~~~~~~~~~~~~~~ 618 (992)
|.+|..+.|..+...++.|||++||.|. ++|+.....
T Consensus 718 g~iP~~~~~~~~~~~~~~gN~~Lcg~~l----~~C~~~~~~ 754 (768)
T 3rgz_A 718 GPIPEMGQFETFPPAKFLNNPGLCGYPL----PRCDPSNAD 754 (768)
T ss_dssp EECCSSSSGGGSCGGGGCSCTEEESTTS----CCCCSCC--
T ss_pred ccCCCchhhccCCHHHhcCCchhcCCCC----cCCCCCccC
Confidence 9999999999999999999999999875 478765543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.1e-62 Score=606.99 Aligned_cols=520 Identities=34% Similarity=0.513 Sum_probs=407.9
Q ss_pred CeEEEeeccccccCCccCC--CCCCCCcCCeeeccCCCCCccCCccc-cCCCCCCEEEeecccCCCCCCcc---------
Q 037275 50 QRVTKLDLSNRTIGGTLSP--YVGNLSFLRYLNLADNNFHGEIPHQI-GRLVRLEALVLANNSFSGKIPTN--------- 117 (992)
Q Consensus 50 ~~v~~ldl~~~~l~~~l~~--~l~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~Ls~n~l~~~~p~~--------- 117 (992)
.+++.|||++|.+.|.+|. .++.+++|++|||++|.+.+.+|..+ ..+++|++|+|++|++++..|..
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 4577888888888887777 78888888888888887776666554 44555555555444444332221
Q ss_pred ----------------cccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEe---
Q 037275 118 ----------------LSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINV--- 178 (992)
Q Consensus 118 ----------------l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l--- 178 (992)
++.+++|++|++++|++++.+|. + .++++|++|+|++|.+++.+|..+.++++|++|++
T Consensus 180 L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l-~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n 257 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-L-GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSN 257 (768)
T ss_dssp CCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-C-TTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSS
T ss_pred CCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-c-ccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCC
Confidence 13445555555555555544444 2 24555555555555555555555555555555554
Q ss_pred -------------------cCCcccCCcCCccCCC-CcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCcc
Q 037275 179 -------------------LGNGLWGRIPNNLGNL-RNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLD 238 (992)
Q Consensus 179 -------------------~~n~l~~~~~~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~ 238 (992)
++|.+.+.+|..+..+ ++|++|+|++|++++.+|..+.++++|++|++++|++.|.+|..
T Consensus 258 ~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~ 337 (768)
T 3rgz_A 258 QFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 337 (768)
T ss_dssp CCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHH
T ss_pred cccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHH
Confidence 4555544566666554 67777777777777667777777777777777777777677766
Q ss_pred ccccccccchhhccccccCCCCchhhhccc-cCceeeeccccccccccccccc--cCccceEecCCCCCCCCCCCCchhh
Q 037275 239 IGVSLPKLLGFIVAENNFAGSIPESLSNAS-NLVELTLFDNQFRGKVSIYFRS--LKNLEWLNLGSNNLGTGEANDLDFL 315 (992)
Q Consensus 239 ~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~ 315 (992)
.+..+++|+.|++++|++.+.+|..+..++ +|++|++++|++++..+..+.. +++|++|++++|+++... +
T Consensus 338 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~------p 411 (768)
T 3rgz_A 338 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI------P 411 (768)
T ss_dssp HHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEEC------C
T ss_pred HHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcccccc------C
Confidence 566677777777777777777777777776 7777777777777666666655 677777777777776422 2
Q ss_pred hhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCC
Q 037275 316 TLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELK 395 (992)
Q Consensus 316 ~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 395 (992)
..+.++++|+.|++++|++.+.+|..+..+. +|+.|++++|++++.+|..+..+++|++|++++|++++.+|..+..++
T Consensus 412 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 490 (768)
T 3rgz_A 412 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred HHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC
Confidence 4578899999999999999999999998886 599999999999999999999999999999999999999999999999
Q ss_pred CCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhc--------
Q 037275 396 NLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSIS-------- 467 (992)
Q Consensus 396 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~-------- 467 (992)
+|++|+|++|++++.+|..+..+++|++|+|++|++++.+|..++.+++|+.|++++|+++|.+|..++...
T Consensus 491 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~ 570 (768)
T 3rgz_A 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFI 570 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTT
T ss_pred CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999998776421
Q ss_pred -------------------------------------------------------------ccccccccccccccCcccc
Q 037275 468 -------------------------------------------------------------TLSLSLDLSYNLLSGTLPL 486 (992)
Q Consensus 468 -------------------------------------------------------------~~~~~L~l~~N~l~~~~~~ 486 (992)
..++.|||++|+++|.+|.
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~ 650 (768)
T 3rgz_A 571 AGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPK 650 (768)
T ss_dssp CSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCG
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCH
Confidence 3456799999999999999
Q ss_pred cccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCc
Q 037275 487 EVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFL 566 (992)
Q Consensus 487 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 566 (992)
.++++++|+.|+|++|+++|.+|..|+++++|+.|+|++|+++|.+|..+..+++|++|||++|+|+|.+|.. ..+.++
T Consensus 651 ~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~ 729 (768)
T 3rgz_A 651 EIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETF 729 (768)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGS
T ss_pred HHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999964 345566
Q ss_pred ceEecCCCcCccc
Q 037275 567 EYLNLSYNHFEGE 579 (992)
Q Consensus 567 ~~L~l~~N~l~~~ 579 (992)
....+.+|+.-|-
T Consensus 730 ~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 730 PPAKFLNNPGLCG 742 (768)
T ss_dssp CGGGGCSCTEEES
T ss_pred CHHHhcCCchhcC
Confidence 6677888875543
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.1e-58 Score=566.79 Aligned_cols=564 Identities=20% Similarity=0.191 Sum_probs=444.2
Q ss_pred CceEeeEEcCC---------CCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecc
Q 037275 38 CQWTGVTCGHR---------HQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANN 108 (992)
Q Consensus 38 c~w~gv~c~~~---------~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n 108 (992)
|.+..|.|+.. ..+++.|||++|.+.+..+..++.+++|++|+|++|.+++..|..|+.+++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 45556677532 346899999999998777778999999999999999999888999999999999999999
Q ss_pred cCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcC
Q 037275 109 SFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIP 188 (992)
Q Consensus 109 ~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 188 (992)
++++..+..|+.+++|++|++++|+++ .+|+..+.++++|++|+|++|.+++..|..++++++|++|++++|.+.+..+
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred ccCccChhhhccCCCCCEEECCCCccC-ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 999433447999999999999999998 5665555589999999999999998889999999999999999999977766
Q ss_pred CccC--CCCcccEEeccCcccccccCcccccc---------------------------CCCcEEeccCCccCCCCCccc
Q 037275 189 NNLG--NLRNLILLNLGENRFSGIVPPSIFNI---------------------------SSLENVFLPTNRFNGSLPLDI 239 (992)
Q Consensus 189 ~~l~--~l~~L~~L~L~~n~l~~~~p~~l~~l---------------------------~~L~~L~l~~N~l~~~~~~~~ 239 (992)
..+. .+++|+.|++++|++++..|..+..+ ++|++|++++|.+.+..|..+
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 6654 45899999999999998878777655 456777777777775544433
Q ss_pred ccccc--ccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCC-CCCCCchh--
Q 037275 240 GVSLP--KLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGT-GEANDLDF-- 314 (992)
Q Consensus 240 ~~~~~--~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~-- 314 (992)
..++ +|+.|++++|++.+..|..|+.+++|++|++++|++++..+..|..+++|++|++++|.... ++...+..
T Consensus 243 -~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~ 321 (680)
T 1ziw_A 243 -LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 321 (680)
T ss_dssp -GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC
T ss_pred -hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC
Confidence 3343 48888888888887777888888888888888888888888888888888888888765431 00000000
Q ss_pred hhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccc--cccCCCccCC--CcccEEEccCCcCCCCCCcc
Q 037275 315 LTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQIS--GIIPTGIRNL--VNLVELCMDDNKLTGTIPHA 390 (992)
Q Consensus 315 ~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~--~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~ 390 (992)
...+..+++|+.|++++|++.+..+..+..+. .|++|++++|.+. ......|..+ ++|+.|++++|++++..|.+
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~ 400 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA 400 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTT
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhcccc-CCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhh
Confidence 01466788899999999999988887777765 4888888888743 2333344433 57888888888888888888
Q ss_pred ccCCCCCcEEeccCccccccCC-CCCCCccccCceeccCCcccCCCCCCcccccccccccccccccc--ccCchhhhhhc
Q 037275 391 IGELKNLQLLYLDSNFLAGGIP-TSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELT--GALPPQILSIS 467 (992)
Q Consensus 391 ~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~--~~~p~~~~~~~ 467 (992)
|..+++|+.|+|++|++++.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.+. +.+|..+. ..
T Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~-~l 479 (680)
T 1ziw_A 401 FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ-PL 479 (680)
T ss_dssp TTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTT-TC
T ss_pred hhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccc-cC
Confidence 8888899999999998876555 57888888999999999888888888888889999999888886 34555443 34
Q ss_pred ccccccccccccccCcccccccCCCCccEEeeecccccccCC--------cccccccccceeeccCCcccccCCcccccc
Q 037275 468 TLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIP--------VTLSACTSLQQLYLQGNSFSGSIPSSLSSL 539 (992)
Q Consensus 468 ~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 539 (992)
..++.|++++|++++..+..|..+++|++|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..|.++
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 556678899999887777778888899999999998886422 237788889999999998885555678888
Q ss_pred CCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCC-C-ccCCcccccccCCCCcCCCCC
Q 037275 540 KSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTK-G-VFSNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 540 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~-~~~~~~~~~l~~N~~~C~~~~ 605 (992)
++|+.|+|++|+|++..+..|..+++|+.|++++|++++.++.. . .++.++.+++.+|||.|+|..
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99999999999998777777888889999999999888876642 2 467788888899999988863
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.8e-59 Score=559.15 Aligned_cols=523 Identities=20% Similarity=0.248 Sum_probs=329.8
Q ss_pred CHHHHHHHHHHHhhccCCCCCCC-------CCCcCCCCCCce---EeeEEcCCCCeEEEeeccccccCCccCCCCCCCCc
Q 037275 6 NETDRLALLAIGSQLEDDPLGVT-------SSWNNSTNLCQW---TGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSF 75 (992)
Q Consensus 6 ~~~~~~~ll~~~~~~~~~~~~~~-------~~w~~~~~~c~w---~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~ 75 (992)
...|+.||.+|++++..+.+... ++|+.+++||.| .||+|+.. ++|+.|||+++.+.|.+|+.++++++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 34799999999999866655433 389999999999 99999865 89999999999999999999999999
Q ss_pred CCeeeccCCCC------Cc------cCCccccCCCCCCEEEeecccCCCCCCccccc-CCCCcEeecccccccccCChhh
Q 037275 76 LRYLNLADNNF------HG------EIPHQIGRLVRLEALVLANNSFSGKIPTNLSR-CSNLISFNARRNNLVGEIPAEL 142 (992)
Q Consensus 76 L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~-l~~L~~L~l~~n~l~~~~p~~~ 142 (992)
|++|||++|.+ .+ .+|... +..|+ ++++.|.+.+.+|..+.. +..+..+++....+..
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~------ 177 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK------ 177 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC------
T ss_pred ceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc------
Confidence 99999999977 22 455444 56667 888888888777776653 2233333333222210
Q ss_pred ccccccccccccc--ccccCCCCCCccccccccceEEecCCcccCC-----------------cCCccC--CCCcccEEe
Q 037275 143 GYNWLKLENLTIA--DNHLTGHFPASIGNLSTLERINVLGNGLWGR-----------------IPNNLG--NLRNLILLN 201 (992)
Q Consensus 143 ~~~l~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-----------------~~~~l~--~l~~L~~L~ 201 (992)
.....++.+.+. +|++++ +|+.++++++|++|+|++|.+.+. +|..++ ++++|++|+
T Consensus 178 -~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~ 255 (636)
T 4eco_A 178 -SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255 (636)
T ss_dssp -CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred -ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE
Confidence 011233333333 467776 777777777777777777777664 777777 777777777
Q ss_pred ccCcccccccCccccccCCCcEEeccCCc-cCC-CCCccccc-----cccccchhhccccccCCCCch--hhhccccCce
Q 037275 202 LGENRFSGIVPPSIFNISSLENVFLPTNR-FNG-SLPLDIGV-----SLPKLLGFIVAENNFAGSIPE--SLSNASNLVE 272 (992)
Q Consensus 202 L~~n~l~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~~~~~~~-----~~~~L~~l~l~~n~l~~~~p~--~l~~l~~L~~ 272 (992)
|++|++.+.+|..++++++|++|++++|+ ++| .+|..++. .+++|+.|++++|+++ .+|. .++++++|++
T Consensus 256 L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~ 334 (636)
T 4eco_A 256 VYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGM 334 (636)
T ss_dssp EECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCE
T ss_pred ecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCE
Confidence 77777777777777777777777777776 665 55554432 1255555555555555 5555 6666666666
Q ss_pred eeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCc-ceEeecCCCcCCCcCCccccccccccee
Q 037275 273 LTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTE-LTAIGLDDNRFGGVLPHSIANLSSTMTD 351 (992)
Q Consensus 273 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~-L~~L~l~~n~l~~~~~~~~~~l~~~L~~ 351 (992)
|++++|++++.+| .|..+++|++|+|++|+++.++. .+..+++ |+.|++++|++. .+|..+....
T Consensus 335 L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~-------~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~----- 400 (636)
T 4eco_A 335 LECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPA-------NFCGFTEQVENLSFAHNKLK-YIPNIFDAKS----- 400 (636)
T ss_dssp EECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCT-------TSEEECTTCCEEECCSSCCS-SCCSCCCTTC-----
T ss_pred EeCcCCcCccchh-hhCCCCCCCEEECCCCccccccH-------hhhhhcccCcEEEccCCcCc-ccchhhhhcc-----
Confidence 6666666665555 66666666666666666654332 2344444 555555555554 3343333221
Q ss_pred EEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCcccc-------CCCCCcEEeccCccccccCCCCCCCccccCce
Q 037275 352 IVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIG-------ELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNL 424 (992)
Q Consensus 352 L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 424 (992)
+++|++|++++|++++..|..|. .+++|+.|+|++|++++..+..+..+++|+.|
T Consensus 401 ------------------l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L 462 (636)
T 4eco_A 401 ------------------VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSI 462 (636)
T ss_dssp ------------------SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEE
T ss_pred ------------------cCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEE
Confidence 12455555555555544444444 44455555555555552222223334555555
Q ss_pred eccCCcccCCCCCC-cccc-------ccccccccccccccccCchhhhhhcccccccccccccccCccccccc--CCCCc
Q 037275 425 ALSSNDLQGSIPPS-LGNC-------KNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVG--NLKNL 494 (992)
Q Consensus 425 ~L~~N~l~~~~~~~-~~~l-------~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~--~l~~L 494 (992)
+|++|+|+ .+|.. +... ++|+.| +|++|+++ .+|..+. .+++|
T Consensus 463 ~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L-------------------------~Ls~N~l~-~lp~~~~~~~l~~L 515 (636)
T 4eco_A 463 NLMGNMLT-EIPKNSLKDENENFKNTYLLTSI-------------------------DLRFNKLT-KLSDDFRATTLPYL 515 (636)
T ss_dssp ECCSSCCS-BCCSSSSEETTEECTTGGGCCEE-------------------------ECCSSCCC-BCCGGGSTTTCTTC
T ss_pred ECCCCCCC-CcCHHHhccccccccccCCccEE-------------------------ECcCCcCC-ccChhhhhccCCCc
Confidence 55555555 23322 2211 144444 33333333 3444444 56666
Q ss_pred cEEeeecccccccCCcccccccccceeec------cCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcce
Q 037275 495 VYFNISVNRFSGEIPVTLSACTSLQQLYL------QGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEY 568 (992)
Q Consensus 495 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L------~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 568 (992)
++|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|++|+|++|+| +.+|..+. ++|+.
T Consensus 516 ~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~ 591 (636)
T 4eco_A 516 VGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISV 591 (636)
T ss_dssp CEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCE
T ss_pred CEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCE
Confidence 666666666664 5666666666666666 67888888999999999999999999999 47777665 78999
Q ss_pred EecCCCcCcccCCCCC---ccCCcccccccCCCCcCCCC
Q 037275 569 LNLSYNHFEGEVPTKG---VFSNKTGISLSGNGKVCGGL 604 (992)
Q Consensus 569 L~l~~N~l~~~~~~~~---~~~~~~~~~l~~N~~~C~~~ 604 (992)
|++++|++.+...... .......+.+..+...|+|+
T Consensus 592 L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~C~ 630 (636)
T 4eco_A 592 LDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQDIRGCD 630 (636)
T ss_dssp EECCSCTTCEEECTTTHHHHHTTCCEEECCTTSEEESCG
T ss_pred EECcCCCCccccHHhcchhhhcccceeecCCccccCCCc
Confidence 9999998886443221 11222333444444555554
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.6e-56 Score=547.62 Aligned_cols=536 Identities=18% Similarity=0.170 Sum_probs=460.2
Q ss_pred EEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccc
Q 037275 53 TKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRN 132 (992)
Q Consensus 53 ~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n 132 (992)
+.+|.+++++ ..+|..+. +++++|+|++|++++..|..|..+++|++|+|++|++++..|..++++++|++|++++|
T Consensus 7 ~~~~cs~~~L-~~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKL-TQVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCC-SSCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCc-cccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 4689999998 56887765 79999999999999766778999999999999999999888999999999999999999
Q ss_pred cccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccC
Q 037275 133 NLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVP 212 (992)
Q Consensus 133 ~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p 212 (992)
+++ .+|...+.++++|++|+|++|.+++..|..|+++++|++|++++|.+.+..|..++++++|++|++++|++++..+
T Consensus 84 ~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 84 ELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred ccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 998 7888766689999999999999998777899999999999999999998889999999999999999999997666
Q ss_pred cccc--ccCCCcEEeccCCccCCCCCccccc--------------------------cccccchhhccccccCCCCchhh
Q 037275 213 PSIF--NISSLENVFLPTNRFNGSLPLDIGV--------------------------SLPKLLGFIVAENNFAGSIPESL 264 (992)
Q Consensus 213 ~~l~--~l~~L~~L~l~~N~l~~~~~~~~~~--------------------------~~~~L~~l~l~~n~l~~~~p~~l 264 (992)
..+. .+++|++|++++|++++..|..+.. ..++|+.|++++|.+.+..|..|
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 6554 5689999999999998655543221 12567888889999998888889
Q ss_pred hcccc--CceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCc-----
Q 037275 265 SNASN--LVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGV----- 337 (992)
Q Consensus 265 ~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~----- 337 (992)
..++. |++|++++|++++..+..|..+++|++|+|++|+++.+... .+..+++|+.|++++|...+.
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~~~~~~~~~~~~ 316 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSH------SLHGLFNVRYLNLKRSFTKQSISLAS 316 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTT------TTTTCTTCCEEECTTCBCCC------
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChh------hhcCCCCccEEeccchhhhccccccc
Confidence 88865 99999999999988889999999999999999999876543 467788999999998876642
Q ss_pred CCc----ccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCC--CCccccCC--CCCcEEeccCccccc
Q 037275 338 LPH----SIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGT--IPHAIGEL--KNLQLLYLDSNFLAG 409 (992)
Q Consensus 338 ~~~----~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l--~~L~~L~L~~N~l~~ 409 (992)
+|. .+..+ .+|++|++++|+++++.+..|.++++|++|++++|.+... .+..|..+ ++|+.|++++|++++
T Consensus 317 lp~i~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~ 395 (680)
T 1ziw_A 317 LPKIDDFSFQWL-KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISK 395 (680)
T ss_dssp CCEECTTTTTTC-TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCE
T ss_pred ccccChhhcccC-CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCe
Confidence 222 34444 4699999999999999999999999999999999986532 23334433 589999999999999
Q ss_pred cCCCCCCCccccCceeccCCcccCCCC-CCccccccccccccccccccccCchhhhhhccccccccccccccc--Ccccc
Q 037275 410 GIPTSLGNLTLLTNLALSSNDLQGSIP-PSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLS--GTLPL 486 (992)
Q Consensus 410 ~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~--~~~~~ 486 (992)
..|..|..+++|+.|++++|++++.+| ..|.++++|++|++++|++++. ++..+...+.++.|++++|.++ +..|.
T Consensus 396 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~~~~L~~L~l~~n~l~~~~~~p~ 474 (680)
T 1ziw_A 396 IESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQL-TRNSFALVPSLQRLMLRRVALKNVDSSPS 474 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEEC-CTTTTTTCTTCCEEECTTSCCBCTTCSSC
T ss_pred EChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCccee-ChhhhhcCcccccchhccccccccccCCc
Confidence 999999999999999999999987665 6899999999999999999854 4445555677889999999997 57889
Q ss_pred cccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCC--------ccccccCCCCEEECCCcccCCCChh
Q 037275 487 EVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIP--------SSLSSLKSIKELDMSSNNLSGQIPE 558 (992)
Q Consensus 487 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~p~ 558 (992)
.|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|++|+|++|+|+...+.
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~ 554 (680)
T 1ziw_A 475 PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVE 554 (680)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHH
Confidence 99999999999999999998888889999999999999999986532 2378999999999999999966556
Q ss_pred hhhcCCCcceEecCCCcCcccCCCC-CccCCcccccccCCCCc
Q 037275 559 YLENLSFLEYLNLSYNHFEGEVPTK-GVFSNKTGISLSGNGKV 600 (992)
Q Consensus 559 ~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~~~~~~l~~N~~~ 600 (992)
.|..+++|+.|++++|++++.++.. ..++.++.+++.+|...
T Consensus 555 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 597 (680)
T 1ziw_A 555 VFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLIT 597 (680)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred HcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCC
Confidence 7999999999999999999877653 45688999999999653
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.1e-56 Score=536.78 Aligned_cols=495 Identities=19% Similarity=0.140 Sum_probs=255.8
Q ss_pred cCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccc
Q 037275 75 FLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTI 154 (992)
Q Consensus 75 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L 154 (992)
++++|||++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|++++|++++..|..+. ++++|++|++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L 112 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALS-GPKALKHLFF 112 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTS-SCTTCCEEEC
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhc-ccccccEeec
Confidence 445555555555544455555555555555555555544455555555555555555555533333332 4555555555
Q ss_pred cccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCc--EEeccCCccC
Q 037275 155 ADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLE--NVFLPTNRFN 232 (992)
Q Consensus 155 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~--~L~l~~N~l~ 232 (992)
++|.+++..|..++++++|++|++++|.+.+..+..+..+++|++|++++|++++..|..+..+++|+ .|++++|++.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 55555544445555555555555555555443323333355555555555555544444555555555 5555555555
Q ss_pred CCCCccccccccccchhhccccc--------------------------cCCCCchhhhccc--cCceeeeccccccccc
Q 037275 233 GSLPLDIGVSLPKLLGFIVAENN--------------------------FAGSIPESLSNAS--NLVELTLFDNQFRGKV 284 (992)
Q Consensus 233 ~~~~~~~~~~~~~L~~l~l~~n~--------------------------l~~~~p~~l~~l~--~L~~L~L~~N~l~~~~ 284 (992)
+..|.. + ....|+.+++++|. .....+..+..+. +|++|++++|.+++..
T Consensus 193 ~~~~~~-~-~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~ 270 (606)
T 3t6q_A 193 GIEPGA-F-DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS 270 (606)
T ss_dssp EECTTT-T-TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCC
T ss_pred ccChhH-h-hhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccC
Confidence 333222 1 12344444444443 1111122233322 5666666666666666
Q ss_pred cccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccC
Q 037275 285 SIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIP 364 (992)
Q Consensus 285 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~ 364 (992)
+..|..+++|++|++++|+++.++. .+..+++|+.|++++|++.+..|..+..++ +|++|++++|.+.+.+|
T Consensus 271 ~~~~~~l~~L~~L~l~~n~l~~lp~-------~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~ 342 (606)
T 3t6q_A 271 SNTFHCFSGLQELDLTATHLSELPS-------GLVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLELG 342 (606)
T ss_dssp TTTTTTCTTCSEEECTTSCCSCCCS-------SCCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCBCC
T ss_pred HHHhccccCCCEEeccCCccCCCCh-------hhcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCcccccc
Confidence 6566666666666666666655433 245555666666666666655555555543 36666666665554333
Q ss_pred C-CccCCCcccEEEccCCcCCCCC--CccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCC-cc
Q 037275 365 T-GIRNLVNLVELCMDDNKLTGTI--PHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPS-LG 440 (992)
Q Consensus 365 ~-~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~ 440 (992)
. .+..+++|++|++++|.+++.. +..+..+++|++|++++|++++..|..|..+++|+.|++++|++++..+.. +.
T Consensus 343 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 422 (606)
T 3t6q_A 343 TGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQ 422 (606)
T ss_dssp SSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTT
T ss_pred hhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhh
Confidence 3 3555666666666666655433 445555666666666666665555555666666666666666665443332 55
Q ss_pred ccccccccccccccccccCchhhhhhcccccccccccccccCc---ccccccCCCCccEEeeecccccccCCcccccccc
Q 037275 441 NCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGT---LPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTS 517 (992)
Q Consensus 441 ~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 517 (992)
.+++|++|++++|.+++..|..+ ...+.++.|++++|.+++. .+..+..+++|++|+|++|++++..|..|.++++
T Consensus 423 ~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 501 (606)
T 3t6q_A 423 NLHLLKVLNLSHSLLDISSEQLF-DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKM 501 (606)
T ss_dssp TCTTCCEEECTTCCCBTTCTTTT-TTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CcccCCEEECCCCccCCcCHHHH-hCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccC
Confidence 55666666555555553333222 2233344455555555431 1133445555555555555555444455555555
Q ss_pred cceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 518 LQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 518 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
|++|+|++|++++..|..+.++++| +|+|++|++++.+|..+..+++|+.|++++|+|.|.|+.
T Consensus 502 L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 502 MNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred CCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 5555555555555455555555555 555555555544444455555555555555555554443
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2e-56 Score=557.01 Aligned_cols=546 Identities=20% Similarity=0.196 Sum_probs=444.7
Q ss_pred CceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccC-CccccCCCCCCEEEeecccCCCCCCc
Q 037275 38 CQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEI-PHQIGRLVRLEALVLANNSFSGKIPT 116 (992)
Q Consensus 38 c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~ 116 (992)
|.|..|.+ ...+++.|||++|.+.+..+..++.+++|++|||++|.+.+.+ |..|+++++|++|+|++|++++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56777776 5567999999999998888899999999999999999776677 77899999999999999999988899
Q ss_pred ccccCCCCcEeecccccccccCChh-hcccccccccccccccccCCCCC-CccccccccceEEecCCcccCCcCCccCCC
Q 037275 117 NLSRCSNLISFNARRNNLVGEIPAE-LGYNWLKLENLTIADNHLTGHFP-ASIGNLSTLERINVLGNGLWGRIPNNLGNL 194 (992)
Q Consensus 117 ~l~~l~~L~~L~l~~n~l~~~~p~~-~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 194 (992)
.|+++++|++|+|++|++++.+|.. .+.++++|++|+|++|.+++..| ..|+++++|++|++++|.+.+..+..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999777664 45588999999999999987655 578999999999999999988888888888
Q ss_pred --CcccEEeccCcccccccCccccccCC------CcEEeccCCccCCCCCccccccc--cccchhhcc---------ccc
Q 037275 195 --RNLILLNLGENRFSGIVPPSIFNISS------LENVFLPTNRFNGSLPLDIGVSL--PKLLGFIVA---------ENN 255 (992)
Q Consensus 195 --~~L~~L~L~~n~l~~~~p~~l~~l~~------L~~L~l~~N~l~~~~~~~~~~~~--~~L~~l~l~---------~n~ 255 (992)
++|+.|+|++|.+.+..|..+..+.+ |++|++++|.+++.++..+...+ .++..+.+. .++
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999888887777665 99999999999887776655432 344555544 344
Q ss_pred cCCCCchhhhcc--ccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCc
Q 037275 256 FAGSIPESLSNA--SNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNR 333 (992)
Q Consensus 256 l~~~~p~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~ 333 (992)
+....+..|..+ ++|++|++++|.+.+..+..|..+++|+.|+|++|+++.+... .+..+++|+.|++++|+
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~------~~~~l~~L~~L~Ls~N~ 325 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADE------AFYGLDNLQVLNLSYNL 325 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTT------TTTTCSSCCEEEEESCC
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChH------HhcCCCCCCEEECCCCC
Confidence 444445555554 6899999999999988889999999999999999999876553 46678899999999999
Q ss_pred CCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCC
Q 037275 334 FGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPT 413 (992)
Q Consensus 334 l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 413 (992)
+.+..|..+..++ +|+.|++++|+++++.+..|..+++|++|+|++|.+++. + .+++|+.|++++|+++ .+|.
T Consensus 326 l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~-~l~~ 398 (844)
T 3j0a_A 326 LGELYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLV-TLPK 398 (844)
T ss_dssp CSCCCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCC-CCCC
T ss_pred CCccCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCcc-cccc
Confidence 9988888888776 599999999999988888899999999999999999843 2 3788999999999998 4554
Q ss_pred CCCCccccCceeccCCcccCCCC-CCccccccccccccccccccccCchhhhhhccccccccccccccc-----Cccccc
Q 037275 414 SLGNLTLLTNLALSSNDLQGSIP-PSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLS-----GTLPLE 487 (992)
Q Consensus 414 ~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~-----~~~~~~ 487 (992)
. ..+++.|++++|++++... ..+..+++|+.|++++|++++..+...+.....++.|++++|.++ +..+..
T Consensus 399 ~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~ 475 (844)
T 3j0a_A 399 I---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDV 475 (844)
T ss_dssp C---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSC
T ss_pred c---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhh
Confidence 3 4578899999999985322 224578899999999999987666555656677888999999987 344566
Q ss_pred ccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcc
Q 037275 488 VGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLE 567 (992)
Q Consensus 488 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 567 (992)
|.++++|++|+|++|++++.+|..|.++++|+.|+|++|+|++..+..+. ++|+.|+|++|+|++..|..| .+|+
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~ 550 (844)
T 3j0a_A 476 FEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLS 550 (844)
T ss_dssp SSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCC
T ss_pred hcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcC
Confidence 88899999999999999988888899999999999999999977777666 899999999999998888765 4788
Q ss_pred eEecCCCcCcccCCCCCccCCcc--cccccCCC--CcCCCCCC
Q 037275 568 YLNLSYNHFEGEVPTKGVFSNKT--GISLSGNG--KVCGGLDE 606 (992)
Q Consensus 568 ~L~l~~N~l~~~~~~~~~~~~~~--~~~l~~N~--~~C~~~~~ 606 (992)
.|++++|++.|.|+..+...++. ...+.|.+ ..|..|..
T Consensus 551 ~l~l~~Np~~C~c~~~~f~~~~~~~~~~~~~~~~~~~C~~p~~ 593 (844)
T 3j0a_A 551 VLDITHNKFICECELSTFINWLNHTNVTIAGPPADIYCVYPDS 593 (844)
T ss_dssp EEEEEEECCCCSSSCCSHHHHHHHTTTTTCCCGGGCCCSSCSS
T ss_pred EEEecCCCcccccccHHHHHHHHhcCcccccccccCccCCchh
Confidence 99999999999988655444332 22233332 46766654
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=8.8e-56 Score=533.85 Aligned_cols=506 Identities=20% Similarity=0.165 Sum_probs=442.5
Q ss_pred EeeEEcCC---------CCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCC
Q 037275 41 TGVTCGHR---------HQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFS 111 (992)
Q Consensus 41 ~gv~c~~~---------~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 111 (992)
..|.|... ...++.|||++|.+.+..|..++.+++|++|+|++|++.+..|..|+.+++|++|+|++|+++
T Consensus 15 ~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~ 94 (606)
T 3t6q_A 15 KTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLI 94 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCS
T ss_pred ceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCccc
Confidence 35778643 246899999999998878889999999999999999999888999999999999999999999
Q ss_pred CCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCcc
Q 037275 112 GKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNL 191 (992)
Q Consensus 112 ~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l 191 (992)
+..|..|+.+++|++|++++|++++ ++...+.++++|++|++++|.+++..+..+..+++|++|++++|.+.+..|..|
T Consensus 95 ~~~~~~~~~l~~L~~L~L~~n~i~~-l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 95 FMAETALSGPKALKHLFFIQTGISS-IDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp EECTTTTSSCTTCCEEECTTSCCSC-GGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred ccChhhhcccccccEeeccccCccc-CCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 8889999999999999999999994 433334589999999999999997554555569999999999999988888889
Q ss_pred CCCCccc--EEeccCcccccccCccccccCCCcEEeccCCccC-------------------------CCCCcccccccc
Q 037275 192 GNLRNLI--LLNLGENRFSGIVPPSIFNISSLENVFLPTNRFN-------------------------GSLPLDIGVSLP 244 (992)
Q Consensus 192 ~~l~~L~--~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~-------------------------~~~~~~~~~~~~ 244 (992)
+.+++|+ .|++++|++++..|..+ ...+|++|++++|... ..++...+..+.
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~ 252 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEPGAF-DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECTTTT-TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGG
T ss_pred hhhcccceeEEecCCCccCccChhHh-hhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhh
Confidence 9999999 99999999997666554 4568999999887510 122233333333
Q ss_pred --ccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCC
Q 037275 245 --KLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCT 322 (992)
Q Consensus 245 --~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~ 322 (992)
+++.+++++|++.+..+..|+.+++|++|++++|+++ ..|..+..+++|++|++++|+++.+.+ ..+..++
T Consensus 253 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~------~~~~~l~ 325 (606)
T 3t6q_A 253 EMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQ------ISASNFP 325 (606)
T ss_dssp GSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGG------GCGGGCT
T ss_pred cCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCch------hhhhccC
Confidence 7899999999999998888999999999999999999 566778999999999999999987543 3467889
Q ss_pred cceEeecCCCcCCCcCCcc-cccccccceeEEeeCCcccccc--CCCccCCCcccEEEccCCcCCCCCCccccCCCCCcE
Q 037275 323 ELTAIGLDDNRFGGVLPHS-IANLSSTMTDIVIAGNQISGII--PTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQL 399 (992)
Q Consensus 323 ~L~~L~l~~n~l~~~~~~~-~~~l~~~L~~L~l~~n~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (992)
+|+.|++++|.+.+.+|.. +..+ .+|++|++++|++++.. +..+..+++|++|++++|++.+..|..|..+++|+.
T Consensus 326 ~L~~L~l~~n~~~~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 404 (606)
T 3t6q_A 326 SLTHLSIKGNTKRLELGTGCLENL-ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404 (606)
T ss_dssp TCSEEECCSCSSCCBCCSSTTTTC-TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSE
T ss_pred cCCEEECCCCCcccccchhhhhcc-CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCe
Confidence 9999999999999877766 5544 56999999999999877 888999999999999999999888999999999999
Q ss_pred EeccCccccccCCC-CCCCccccCceeccCCcccCCCCCCccccccccccccccccccccC-c-hhhhhhcccccccccc
Q 037275 400 LYLDSNFLAGGIPT-SLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGAL-P-PQILSISTLSLSLDLS 476 (992)
Q Consensus 400 L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-p-~~~~~~~~~~~~L~l~ 476 (992)
|++++|++++..+. .+..+++|++|++++|.+++..|..+..+++|++|++++|++++.. + ...+.....++.|+++
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls 484 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLS 484 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECT
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECC
Confidence 99999999977665 4899999999999999999988999999999999999999998632 2 2445666778899999
Q ss_pred cccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCC
Q 037275 477 YNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQI 556 (992)
Q Consensus 477 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 556 (992)
+|++++..|..|..+++|++|+|++|++++..|..|..++.| .|+|++|++++..|..+..+++|+.|+|++|+++...
T Consensus 485 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 485 FCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 999998889999999999999999999999999999999999 9999999999988999999999999999999998644
Q ss_pred h
Q 037275 557 P 557 (992)
Q Consensus 557 p 557 (992)
+
T Consensus 564 ~ 564 (606)
T 3t6q_A 564 S 564 (606)
T ss_dssp G
T ss_pred C
Confidence 4
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.8e-55 Score=528.25 Aligned_cols=518 Identities=19% Similarity=0.167 Sum_probs=305.2
Q ss_pred eEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecc
Q 037275 51 RVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNAR 130 (992)
Q Consensus 51 ~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~ 130 (992)
+++.|||++|.+.+..+..++.+++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|+++
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 34555555555544444455555555555555555554444445555555555555555554445555555555555555
Q ss_pred cccccccCChhhcccccccccccccccccCC-CCCCccccccccceEEecCCcccCCcCCccCCCCccc----EEeccCc
Q 037275 131 RNNLVGEIPAELGYNWLKLENLTIADNHLTG-HFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLI----LLNLGEN 205 (992)
Q Consensus 131 ~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~----~L~L~~n 205 (992)
+|+++ .+|...+.++++|++|++++|.+++ .+|..|+++++|++|++++|.+.+..|..|+.+++|+ +|++++|
T Consensus 113 ~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 113 ETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred CCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 55554 2222222345555555555555543 3455555555555555555555444444444444433 4555555
Q ss_pred ccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCC------CCchhhhccc--cCceeee-c
Q 037275 206 RFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAG------SIPESLSNAS--NLVELTL-F 276 (992)
Q Consensus 206 ~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~------~~p~~l~~l~--~L~~L~L-~ 276 (992)
.+++..+..+ ...+|++|++++|.+.+.........++.++.+.+..+.+.+ ..+..+..+. .++.+++ .
T Consensus 192 ~l~~~~~~~~-~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAF-QGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTT-TTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccc-cCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 5553222222 222455555555544432222222333333333332222211 1111111111 2334444 5
Q ss_pred cccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeC
Q 037275 277 DNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAG 356 (992)
Q Consensus 277 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~ 356 (992)
.|.+.+..+. +..+++|+.|++++|.++.++ .+..+++|+.|++++|.+ +.+| .+ .+ +.|++|++++
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l~~n~l-~~lp-~~-~l-~~L~~L~l~~ 337 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSIIRCQL-KQFP-TL-DL-PFLKSLTLTM 337 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEEESCCC-SSCC-CC-CC-SSCCEEEEES
T ss_pred cccccccccc-cccCCCCCEEEecCccchhhh--------hccccccCCEEEcccccC-cccc-cC-CC-CccceeeccC
Confidence 6666766666 778888888888888887654 256677888888888888 5666 33 33 4688888888
Q ss_pred CccccccCCCccCCCcccEEEccCCcCCCC--CCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCC
Q 037275 357 NQISGIIPTGIRNLVNLVELCMDDNKLTGT--IPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGS 434 (992)
Q Consensus 357 n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 434 (992)
|...+.. .+..+++|++|++++|++++. .|..+..+++|+.|++++|++++ +|..+..+++|+.|++++|++.+.
T Consensus 338 n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~ 414 (606)
T 3vq2_A 338 NKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRV 414 (606)
T ss_dssp CSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEEST
T ss_pred CcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCc
Confidence 8555433 566788888888888888755 37777888888888888888874 557788888888888888888876
Q ss_pred CC-CCccccccccccccccccccccCchhhhhhcccccccccccccccC-cccccccCCCCccEEeeecccccccCCccc
Q 037275 435 IP-PSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSG-TLPLEVGNLKNLVYFNISVNRFSGEIPVTL 512 (992)
Q Consensus 435 ~~-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 512 (992)
.| ..+..+++|++|++++|++++..|..+. ....++.|++++|.+++ .+|..++.+++|++|+|++|++++..|..|
T Consensus 415 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 493 (606)
T 3vq2_A 415 TEFSAFLSLEKLLYLDISYTNTKIDFDGIFL-GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 493 (606)
T ss_dssp TTTTTTTTCTTCCEEECTTSCCEECCTTTTT-TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cChhhhhccccCCEEECcCCCCCccchhhhc-CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhh
Confidence 66 5777888888887777777755544433 33445566777777665 356666667777777777777766666666
Q ss_pred ccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCC-CcceEecCCCcCcccCCCCCccCC
Q 037275 513 SACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLS-FLEYLNLSYNHFEGEVPTKGVFSN 588 (992)
Q Consensus 513 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~~~ 588 (992)
.++++|++|+|++|++++.+|..|.++++|++|+|++|+|+ .+|..+..++ +|++|++++|+|.|.++..+...+
T Consensus 494 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~ 569 (606)
T 3vq2_A 494 DTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQW 569 (606)
T ss_dssp TTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTT
T ss_pred cccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHHHHHH
Confidence 66777777777777776666666777777777777777766 4555566665 477777777777766665433333
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.6e-56 Score=539.71 Aligned_cols=490 Identities=19% Similarity=0.249 Sum_probs=325.1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCCcCCC-----CC--Cce------------EeeEEcCCCCeEEEeeccccccCCc
Q 037275 5 SNETDRLALLAIGSQLEDDPLGVTSSWNNST-----NL--CQW------------TGVTCGHRHQRVTKLDLSNRTIGGT 65 (992)
Q Consensus 5 ~~~~~~~~ll~~~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~ldl~~~~l~~~ 65 (992)
+..+|++||++||+++. +| +|+.+. +| |.| .||+|+. +++|+.|||+++++.|.
T Consensus 266 ~~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp HHHHHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEE
T ss_pred cchHHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCc
Confidence 34579999999999984 54 786443 55 999 9999986 68999999999999999
Q ss_pred cCCCCCCCCcCCeeec-cCCCCCccCCccccC------------------------------------------------
Q 037275 66 LSPYVGNLSFLRYLNL-ADNNFHGEIPHQIGR------------------------------------------------ 96 (992)
Q Consensus 66 l~~~l~~l~~L~~L~L-~~n~l~~~~p~~~~~------------------------------------------------ 96 (992)
+|+.+++|++|++||| ++|.+.|..|-....
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 889888764422111
Q ss_pred ---CCCCCEEEee--cccCCCCCCcccccCCCCcEeecccccccc-cCChhhcccccccccccccccccCCCCCCccc--
Q 037275 97 ---LVRLEALVLA--NNSFSGKIPTNLSRCSNLISFNARRNNLVG-EIPAELGYNWLKLENLTIADNHLTGHFPASIG-- 168 (992)
Q Consensus 97 ---l~~L~~L~Ls--~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-- 168 (992)
...++.+.++ .|++++ +|..|+++++|+.|+|++|++++ .+|... +..+.|.+++.+|+.++
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~---------~~~s~n~~~g~iP~~l~f~ 488 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDW---------EDANSDYAKQYENEELSWS 488 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSC---------SCTTSHHHHHHTTSCCCGG
T ss_pred cccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccc---------cccccccccccCChhhhhc
Confidence 1112222222 245554 55555555555555555555554 122111 01111333335888877
Q ss_pred cccccceEEecCCcccCCcCCccCCCCcccEEeccCcc-ccc-ccCccccccC-------CCcEEeccCCccCCCCCc-c
Q 037275 169 NLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENR-FSG-IVPPSIFNIS-------SLENVFLPTNRFNGSLPL-D 238 (992)
Q Consensus 169 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~p~~l~~l~-------~L~~L~l~~N~l~~~~~~-~ 238 (992)
++++|++|+|++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|..++.++ +|++|+|++|+++ .+|. .
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~ 567 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASA 567 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChh
Confidence 88888888888888888888888888888999998887 887 7787777665 8888888888877 4443 1
Q ss_pred ccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhc
Q 037275 239 IGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLL 318 (992)
Q Consensus 239 ~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l 318 (992)
.++++++|++|+|++|+++ .+| .|..+++|++|+|++|+++.++. .+
T Consensus 568 ------------------------~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~-------~l 614 (876)
T 4ecn_A 568 ------------------------SLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPE-------DF 614 (876)
T ss_dssp ------------------------HHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCCT-------TS
T ss_pred ------------------------hhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccchH-------HH
Confidence 3444444555555555444 233 44444555555555554443322 13
Q ss_pred cCCCc-ceEeecCCCcCCCcCCccccccc-ccceeEEeeCCccccccCCC---cc--CCCcccEEEccCCcCCCCCCcc-
Q 037275 319 TNCTE-LTAIGLDDNRFGGVLPHSIANLS-STMTDIVIAGNQISGIIPTG---IR--NLVNLVELCMDDNKLTGTIPHA- 390 (992)
Q Consensus 319 ~~~~~-L~~L~l~~n~l~~~~~~~~~~l~-~~L~~L~l~~n~i~~~~~~~---~~--~l~~L~~L~L~~N~l~~~~~~~- 390 (992)
..+++ |+.|++++|++. .+|..+.... .+|+.|++++|++.+.+|.. +. .+++|+.|+|++|+++ .+|..
T Consensus 615 ~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~ 692 (876)
T 4ecn_A 615 CAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTEL 692 (876)
T ss_dssp CEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHH
T ss_pred hhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHH
Confidence 34444 555555555544 3444443332 13555556666555544322 12 2347778888888887 44443
Q ss_pred ccCCCCCcEEeccCccccccCCCCCCC--------ccccCceeccCCcccCCCCCCcc--ccccccccccccccccccCc
Q 037275 391 IGELKNLQLLYLDSNFLAGGIPTSLGN--------LTLLTNLALSSNDLQGSIPPSLG--NCKNLIELHMADIELTGALP 460 (992)
Q Consensus 391 ~~~l~~L~~L~L~~N~l~~~~~~~~~~--------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~l~~n~l~~~~p 460 (992)
+..+++|+.|+|++|+|+ .+|..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|++++|
T Consensus 693 ~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N------- 763 (876)
T 4ecn_A 693 FATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYN------- 763 (876)
T ss_dssp HHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSS-------
T ss_pred HccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCC-------
Confidence 447778888888888877 44443332 337888888888888 5677665 7777777744444
Q ss_pred hhhhhhcccccccccccccccCcccccccCCCCccEEeeec------ccccccCCcccccccccceeeccCCcccccCCc
Q 037275 461 PQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISV------NRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPS 534 (992)
Q Consensus 461 ~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 534 (992)
.+++ +|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|+| +.+|.
T Consensus 764 ------------------~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~ 823 (876)
T 4ecn_A 764 ------------------CFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDE 823 (876)
T ss_dssp ------------------CCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred ------------------CCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCH
Confidence 4443 566666777777777755 777788888888888888888888888 57787
Q ss_pred cccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcc
Q 037275 535 SLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEG 578 (992)
Q Consensus 535 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 578 (992)
.+. ++|+.|+|++|++....+..+.....+..+.|.+|++..
T Consensus 824 ~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 824 KLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp CCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred hhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccc
Confidence 765 589999999998887777777776677788888887765
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-54 Score=537.55 Aligned_cols=527 Identities=18% Similarity=0.168 Sum_probs=450.5
Q ss_pred EeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCC-CcccccCCCCcEeecccc
Q 037275 54 KLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKI-PTNLSRCSNLISFNARRN 132 (992)
Q Consensus 54 ~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~l~~n 132 (992)
.+|.+++++ ..+|. ..++|++|||++|.+++..|..|..+++|++|+|++|.+.+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L-~~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNL-TQVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCS-SCCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCC-CCCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 455566677 45676 5689999999999999888999999999999999999777677 788999999999999999
Q ss_pred cccccCChhhcccccccccccccccccCCCCCCc--cccccccceEEecCCcccCCcC-CccCCCCcccEEeccCccccc
Q 037275 133 NLVGEIPAELGYNWLKLENLTIADNHLTGHFPAS--IGNLSTLERINVLGNGLWGRIP-NNLGNLRNLILLNLGENRFSG 209 (992)
Q Consensus 133 ~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~ 209 (992)
++.+..|..+. ++++|++|+|++|.+++.+|.. |.++++|++|++++|.+.+..+ ..|+++++|++|+|++|.+++
T Consensus 84 ~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 84 KIYFLHPDAFQ-GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCEECTTSSC-SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred cCcccCHhHcc-CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 99966666665 8999999999999999877765 9999999999999999977655 579999999999999999998
Q ss_pred ccCcccccc--CCCcEEeccCCccCCCCCcccccc-----ccccchhhccccccCCCCchhhhcc---ccCceeeec---
Q 037275 210 IVPPSIFNI--SSLENVFLPTNRFNGSLPLDIGVS-----LPKLLGFIVAENNFAGSIPESLSNA---SNLVELTLF--- 276 (992)
Q Consensus 210 ~~p~~l~~l--~~L~~L~l~~N~l~~~~~~~~~~~-----~~~L~~l~l~~n~l~~~~p~~l~~l---~~L~~L~L~--- 276 (992)
..+..+..+ ++|+.|+++.|.+.+..|..+... ...|+.|++++|++.+.+|..+... .++..|.++
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 889999888 899999999999998777654321 1248999999999998888877654 567788776
Q ss_pred ------ccccccccccccccc--CccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCccccccccc
Q 037275 277 ------DNQFRGKVSIYFRSL--KNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSST 348 (992)
Q Consensus 277 ------~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~ 348 (992)
.|.+.+.....|..+ ++|++|+|++|.+..+... .+..+++|+.|++++|++.+..|..+..+. +
T Consensus 243 ~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~ 315 (844)
T 3j0a_A 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR------VFETLKDLKVLNLAYNKINKIADEAFYGLD-N 315 (844)
T ss_dssp CBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSC------CSSSCCCCCEEEEESCCCCEECTTTTTTCS-S
T ss_pred ccccccccccCCCChhhhhccccCCccEEECCCCcccccChh------hhhcCCCCCEEECCCCcCCCCChHHhcCCC-C
Confidence 344444555566665 7899999999999876543 467889999999999999999888888775 6
Q ss_pred ceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccC
Q 037275 349 MTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSS 428 (992)
Q Consensus 349 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 428 (992)
|++|++++|++++..|..|..+++|++|++++|++.+..+..|..+++|+.|+|++|.+++. ..+++|+.|++++
T Consensus 316 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~ 390 (844)
T 3j0a_A 316 LQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSG 390 (844)
T ss_dssp CCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEES
T ss_pred CCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCC
Confidence 99999999999999999999999999999999999988888999999999999999999842 2378899999999
Q ss_pred CcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccc-cccCCCCccEEeeeccccc--
Q 037275 429 NDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPL-EVGNLKNLVYFNISVNRFS-- 505 (992)
Q Consensus 429 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-- 505 (992)
|+++ .+|.. ..+++.|++++|++++.-........+.++.|+|++|++++..+. .+..+++|++|+|++|.++
T Consensus 391 N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 466 (844)
T 3j0a_A 391 NKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLA 466 (844)
T ss_dssp CCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSS
T ss_pred CCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccc
Confidence 9999 45654 467899999999998654444444566788999999999965543 4667899999999999997
Q ss_pred ---ccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 506 ---GEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 506 ---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
+..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|++++.+|.
T Consensus 467 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~ 544 (844)
T 3j0a_A 467 WETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD 544 (844)
T ss_dssp CCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC
T ss_pred cccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh
Confidence 44556789999999999999999999999999999999999999999987777766 8999999999999998885
Q ss_pred CCccCCcccccccCCCCcCCCCC
Q 037275 583 KGVFSNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 583 ~~~~~~~~~~~l~~N~~~C~~~~ 605 (992)
.+..+..+++.+|||.|+|+.
T Consensus 545 --~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 545 --VFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp --CCSSCCEEEEEEECCCCSSSC
T ss_pred --HhCCcCEEEecCCCccccccc
Confidence 467899999999999998864
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.5e-55 Score=529.86 Aligned_cols=489 Identities=18% Similarity=0.104 Sum_probs=422.6
Q ss_pred CeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeec
Q 037275 50 QRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNA 129 (992)
Q Consensus 50 ~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l 129 (992)
.+++.|||++|.+.+..|..++.+++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..++++++|++|++
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 46899999999998877889999999999999999999877999999999999999999999666688999999999999
Q ss_pred ccccccc-cCChhhcccccccccccccccccCCCCCCccccccccc----eEEecCCcccCCcCCccCCCCcccEEeccC
Q 037275 130 RRNNLVG-EIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLE----RINVLGNGLWGRIPNNLGNLRNLILLNLGE 204 (992)
Q Consensus 130 ~~n~l~~-~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~ 204 (992)
++|++++ .+|..+. ++++|++|++++|.+++..|..++.+.+|+ +|++++|.+.+..+..+.. .+|+.|++++
T Consensus 136 ~~n~l~~~~lp~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~ 213 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFS-NLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRG 213 (606)
T ss_dssp CSSCCCCCCCCGGGG-TCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEES
T ss_pred CCCcccceechHhHh-hcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccC-ceeeeeeccC
Confidence 9999986 6788776 899999999999999998899999988876 7999999997655555555 4999999999
Q ss_pred cccc-cccCccccccCCCcEEeccCCccCCC-----CCcccccccc--ccchhhc-cccccCCCCchhhhccccCceeee
Q 037275 205 NRFS-GIVPPSIFNISSLENVFLPTNRFNGS-----LPLDIGVSLP--KLLGFIV-AENNFAGSIPESLSNASNLVELTL 275 (992)
Q Consensus 205 n~l~-~~~p~~l~~l~~L~~L~l~~N~l~~~-----~~~~~~~~~~--~L~~l~l-~~n~l~~~~p~~l~~l~~L~~L~L 275 (992)
|.++ +..|..+.++++|+.+++..+.+.+. ++...+..+. .++.+.+ ..|.+.+.+|. +..+++|+.|++
T Consensus 214 n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l 292 (606)
T 3vq2_A 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSL 292 (606)
T ss_dssp CCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEE
T ss_pred CccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEe
Confidence 9997 45788899999999999877665532 1112222222 3444555 67788888887 999999999999
Q ss_pred ccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEee
Q 037275 276 FDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIA 355 (992)
Q Consensus 276 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~ 355 (992)
++|.+.... .+..+++|++|++++|+++.++. + .+++|+.|++++|+..+.. .+..+ ++|++|+++
T Consensus 293 ~~~~~~~l~--~l~~~~~L~~L~l~~n~l~~lp~--------~-~l~~L~~L~l~~n~~~~~~--~~~~l-~~L~~L~ls 358 (606)
T 3vq2_A 293 AGVSIKYLE--DVPKHFKWQSLSIIRCQLKQFPT--------L-DLPFLKSLTLTMNKGSISF--KKVAL-PSLSYLDLS 358 (606)
T ss_dssp ESCCCCCCC--CCCTTCCCSEEEEESCCCSSCCC--------C-CCSSCCEEEEESCSSCEEC--CCCCC-TTCCEEECC
T ss_pred cCccchhhh--hccccccCCEEEcccccCccccc--------C-CCCccceeeccCCcCccch--hhccC-CCCCEEECc
Confidence 999998544 88999999999999999977652 4 7899999999999666544 34444 469999999
Q ss_pred CCcccccc--CCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCC-CCCCCccccCceeccCCccc
Q 037275 356 GNQISGII--PTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIP-TSLGNLTLLTNLALSSNDLQ 432 (992)
Q Consensus 356 ~n~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 432 (992)
+|++++.. |..+..+++|++|++++|.++ .+|..+..+++|+.|++++|++++..| ..+.++++|+.|++++|+++
T Consensus 359 ~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 437 (606)
T 3vq2_A 359 RNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTK 437 (606)
T ss_dssp SSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCE
T ss_pred CCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCC
Confidence 99999874 788999999999999999998 466889999999999999999998777 68999999999999999999
Q ss_pred CCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCccc
Q 037275 433 GSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTL 512 (992)
Q Consensus 433 ~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 512 (992)
+..|..+..+++|++|++++|++++.+++..+.....++.|++++|.+++..|..|..+++|++|+|++|++++..|..|
T Consensus 438 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 517 (606)
T 3vq2_A 438 IDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHY 517 (606)
T ss_dssp ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGT
T ss_pred ccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHc
Confidence 98999999999999999999999986545555566777889999999999889999999999999999999999889999
Q ss_pred ccccccceeeccCCcccccCCccccccC-CCCEEECCCcccCCCCh
Q 037275 513 SACTSLQQLYLQGNSFSGSIPSSLSSLK-SIKELDMSSNNLSGQIP 557 (992)
Q Consensus 513 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p 557 (992)
..+++|+.|+|++|+|+ .+|..+..++ +|++|++++|.+...-+
T Consensus 518 ~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 518 NQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred cCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999999999999999 6777799997 59999999999986444
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.9e-51 Score=489.97 Aligned_cols=495 Identities=16% Similarity=0.186 Sum_probs=379.3
Q ss_pred CCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCc
Q 037275 37 LCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPT 116 (992)
Q Consensus 37 ~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 116 (992)
.|.|.|| |+. +++++ ..+|+.+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~----------~~~~l-~~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSF-TSIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EEC----------TTSCC-SSCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EEC----------CCCcc-ccccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999998 843 44555 46777664 7899999999999977788899999999999999999977778
Q ss_pred ccccCCCCcEeecccccccccCChhhcccccccccccccccccCC-CCCCccccccccceEEecCCcccCCcC-CccCCC
Q 037275 117 NLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTG-HFPASIGNLSTLERINVLGNGLWGRIP-NNLGNL 194 (992)
Q Consensus 117 ~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l 194 (992)
.|+.+++|++|++++|+++ .+|...+.++++|++|+|++|.+++ ..|..++++++|++|++++|.+.+.+| ..|.++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTTCTTCCEEECTTSCCC-SCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hccccccCCEEECCCCccC-ccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 8999999999999999998 4555544589999999999999986 357889999999999999998545555 679999
Q ss_pred CcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCC--c-hhhhccccCc
Q 037275 195 RNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSI--P-ESLSNASNLV 271 (992)
Q Consensus 195 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~--p-~~l~~l~~L~ 271 (992)
++|++|++++|++++..|..+..+++|++|+++.|.+. .+|...+..+++|+.|++++|++.+.. | .....+++|+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~ 226 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCC
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhccc
Confidence 99999999999999889999999999999999999886 556555556888999999999988742 2 2234578899
Q ss_pred eeeeccccccccccc----cccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCC----cccc
Q 037275 272 ELTLFDNQFRGKVSI----YFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLP----HSIA 343 (992)
Q Consensus 272 ~L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~----~~~~ 343 (992)
+|++++|.+++..+. .+..+.+|+.|++++|.+..+..-.......+..+.+|+.|.+.++.+..... ..+.
T Consensus 227 ~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~ 306 (549)
T 2z81_A 227 KLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVY 306 (549)
T ss_dssp EEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHH
T ss_pred ceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhh
Confidence 999999998865543 34567889999999988766433222223345667778888888877653210 0111
Q ss_pred cccccceeEEeeCCccccccCCCc-cCCCcccEEEccCCcCCCCCC---ccccCCCCCcEEeccCccccccCC--CCCCC
Q 037275 344 NLSSTMTDIVIAGNQISGIIPTGI-RNLVNLVELCMDDNKLTGTIP---HAIGELKNLQLLYLDSNFLAGGIP--TSLGN 417 (992)
Q Consensus 344 ~l~~~L~~L~l~~n~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~ 417 (992)
....+++.|++++|+++. +|..+ ..+++|++|+|++|++++..| ..++.+++|+.|+|++|++++..+ ..+..
T Consensus 307 ~~~~~L~~L~l~~n~l~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 385 (549)
T 2z81_A 307 SLLEKVKRITVENSKVFL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLT 385 (549)
T ss_dssp HHSTTCCEEEEESSCCCC-CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGG
T ss_pred hhcccceEEEeccCcccc-CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhc
Confidence 223467778888887763 44443 567788888888888776543 236677778888888888774322 34667
Q ss_pred ccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEE
Q 037275 418 LTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYF 497 (992)
Q Consensus 418 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L 497 (992)
+++|++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+ .++|++|
T Consensus 386 l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~--------------------------~l~~~~--~~~L~~L 436 (549)
T 2z81_A 386 LKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR--------------------------VVKTCI--PQTLEVL 436 (549)
T ss_dssp CTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS--------------------------CCCTTS--CTTCSEE
T ss_pred CCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc--------------------------cccchh--cCCceEE
Confidence 777888888888877 56777777777777766666554 222222 2589999
Q ss_pred eeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCc
Q 037275 498 NISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFE 577 (992)
Q Consensus 498 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 577 (992)
+|++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..+..+++|+.|++++|+|.
T Consensus 437 ~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 510 (549)
T 2z81_A 437 DVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510 (549)
T ss_dssp ECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBC
T ss_pred ECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCcc
Confidence 99999998643 57889999999999998 6776 567899999999999999988888999999999999999999
Q ss_pred ccCCCC
Q 037275 578 GEVPTK 583 (992)
Q Consensus 578 ~~~~~~ 583 (992)
|.+|..
T Consensus 511 ~~~~~~ 516 (549)
T 2z81_A 511 CSCPRI 516 (549)
T ss_dssp CCHHHH
T ss_pred CCCccH
Confidence 988853
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=485.98 Aligned_cols=511 Identities=20% Similarity=0.185 Sum_probs=274.5
Q ss_pred EEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeeccc
Q 037275 52 VTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARR 131 (992)
Q Consensus 52 v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~ 131 (992)
++.|||++|.+.+..+..+..+++|++|||++|++++..|..|+.+++|++|+|++|++++..|..|+.+++|++|++++
T Consensus 30 l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 109 (570)
T 2z63_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (570)
T ss_dssp CCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccc
Confidence 44455555544433344444455555555555544433344444455555555555554433334444455555555555
Q ss_pred ccccccCChhhcccccccccccccccccCC-CCCCccccccccceEEecCCcccCCcCCccCCCCcc----cEEeccCcc
Q 037275 132 NNLVGEIPAELGYNWLKLENLTIADNHLTG-HFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNL----ILLNLGENR 206 (992)
Q Consensus 132 n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L----~~L~L~~n~ 206 (992)
|+++ .+|...+.++++|++|++++|.+++ .+|..|+++++|++|++++|.+.+..+..++.+++| +.|++++|.
T Consensus 110 n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 110 TNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp SCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred cccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 5444 2332222244445555555544443 234444444455555555444444444444444444 444445544
Q ss_pred cccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccc------cCCCCchhhhccc--cCceeeeccc
Q 037275 207 FSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENN------FAGSIPESLSNAS--NLVELTLFDN 278 (992)
Q Consensus 207 l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~------l~~~~p~~l~~l~--~L~~L~L~~N 278 (992)
+++..|..+..+ +|++|++++|.............++.+..+.+..+. +.......+..+. .++.+++++|
T Consensus 189 l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 189 MNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred ceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 444333333332 444444444422211000001111111111111000 0001111111111 2334444444
Q ss_pred -cccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCC
Q 037275 279 -QFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGN 357 (992)
Q Consensus 279 -~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n 357 (992)
.+.+..+..|..+++|++|++++|.++.++. .+..+ +|+.|++++|.+. .+|.. ..+.|+.|++++|
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~-------~~~~~-~L~~L~l~~n~~~-~l~~~---~l~~L~~L~l~~n 335 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD-------FSYNF-GWQHLELVNCKFG-QFPTL---KLKSLKRLTFTSN 335 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEECSCCB-------CCSCC-CCSEEEEESCBCS-SCCBC---BCSSCCEEEEESC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccchhhhh-------hhccC-CccEEeeccCccc-ccCcc---cccccCEEeCcCC
Confidence 4444444555555555555555555544332 12333 4455555555444 22221 1123444555555
Q ss_pred ccccccCCCccCCCcccEEEccCCcCCCCC--CccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCC
Q 037275 358 QISGIIPTGIRNLVNLVELCMDDNKLTGTI--PHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSI 435 (992)
Q Consensus 358 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 435 (992)
.+.+..+. ..+++|++|++++|++++.. +..+..+++|++|++++|++++..+. +..+++|+.|++++|.+.+..
T Consensus 336 ~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~ 412 (570)
T 2z63_A 336 KGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMS 412 (570)
T ss_dssp BSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCT
T ss_pred cccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCcccccc
Confidence 44443332 34445555555555544322 34444455555555555555433222 444555555555555554433
Q ss_pred C-CCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeeccccc-ccCCcccc
Q 037275 436 P-PSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFS-GEIPVTLS 513 (992)
Q Consensus 436 ~-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~ 513 (992)
+ ..+..+++|+ .|++++|.+++..|..+..+++|++|++++|.++ +.+|..+.
T Consensus 413 ~~~~~~~l~~L~-------------------------~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~ 467 (570)
T 2z63_A 413 EFSVFLSLRNLI-------------------------YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFT 467 (570)
T ss_dssp TSCTTTTCTTCC-------------------------EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCT
T ss_pred chhhhhcCCCCC-------------------------EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhh
Confidence 3 2344444444 4577777777778888999999999999999998 57899999
Q ss_pred cccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCCcc-CCccc-
Q 037275 514 ACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGVF-SNKTG- 591 (992)
Q Consensus 514 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~~~~~- 591 (992)
.+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|+++|.+|....+ .|+..
T Consensus 468 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~ 547 (570)
T 2z63_A 468 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKN 547 (570)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHT
T ss_pred cccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhc
Confidence 9999999999999999988999999999999999999999988888999999999999999999999987655 44432
Q ss_pred -ccccCCCCcCCCCC
Q 037275 592 -ISLSGNGKVCGGLD 605 (992)
Q Consensus 592 -~~l~~N~~~C~~~~ 605 (992)
..+.+.+ .|++|.
T Consensus 548 ~~~~~~~~-~C~~~~ 561 (570)
T 2z63_A 548 SQKEQGSA-KCSGSG 561 (570)
T ss_dssp GGGEESCC-BBTTTC
T ss_pred cccCCCch-hhCCCC
Confidence 3455666 887764
No 15
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.2e-51 Score=442.75 Aligned_cols=265 Identities=24% Similarity=0.419 Sum_probs=210.8
Q ss_pred cCCCCCCccccccceEEEEeEEC-----CCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLG-----ENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++|+|.+ .
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-----G 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-----C
Confidence 46788899999999999999874 3578999999976555566789999999999999999999999753 4
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccc-------hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQ-------QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD 826 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 826 (992)
+..++|||||++|+|.++++..... .....++|.+++.|+.|||+||+|||++ +||||||||+|||++++
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 5679999999999999999875421 1234699999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCC
Q 037275 827 LVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQG 905 (992)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~ 905 (992)
+.+||+|||+|+....... ........||+.|||||++.+..|+.++|||||||++|||+| |+.||.+....
T Consensus 165 ~~~Ki~DFGla~~~~~~~~------~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~- 237 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN- 237 (299)
T ss_dssp GCEEECCCSCHHHHTGGGC------EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-
T ss_pred CcEEECCcccceecCCCCc------eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 9999999999986643211 111233468999999999999999999999999999999999 99999764221
Q ss_pred ccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 906 LTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
+++.....+.. ...+ ...+.++.+++.+||+.||++|||++||.+.|+++.+.
T Consensus 238 ----------------~~~~~i~~~~~-~~~p----------~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 238 ----------------EVIECITQGRV-LQRP----------RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ----------------HHHHHHHHTCC-CCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHcCCC-CCCC----------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11111111111 0011 11234688999999999999999999999999988654
No 16
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1e-50 Score=440.10 Aligned_cols=250 Identities=21% Similarity=0.299 Sum_probs=207.5
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQAI 758 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 758 (992)
..|++.++||+|+||+||+|++..+|+.||||+++.......+.+.+|+.+|++++|||||++++++. +.+.+|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-----~~~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCEEEE
Confidence 46999999999999999999999999999999998776666778999999999999999999999964 4567899
Q ss_pred EEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccce
Q 037275 759 VYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAK 838 (992)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (992)
|||||++|+|.+++... .+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 149 vmEy~~gg~L~~~l~~~-------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EECCCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 99999999999999753 489999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCCh
Q 037275 839 FLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALPD 918 (992)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 918 (992)
.+... .......+||+.|||||++.+..|+.++||||+||++|||++|++||.+....
T Consensus 219 ~~~~~--------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-------------- 276 (346)
T 4fih_A 219 QVSKE--------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-------------- 276 (346)
T ss_dssp ECCSS--------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------------
T ss_pred ecCCC--------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------------
Confidence 76532 12234568999999999999999999999999999999999999999753211
Q ss_pred hHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 919 KVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.+..... .... . .........++.+++.+||+.||++|||++|+++
T Consensus 277 ---~~~~~i~~-~~~~----~----~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 277 ---KAMKMIRD-NLPP----R----LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ---HHHHHHHH-SSCC----C----CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---HHHHHHHc-CCCC----C----CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111110 0000 0 0001122346889999999999999999999976
No 17
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-51 Score=438.42 Aligned_cols=264 Identities=27% Similarity=0.400 Sum_probs=203.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.++||+|+||+||+|++. ..||||+++.... ...+.|.+|+.++++++|||||+++|++.. +.
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~ 105 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------Ce
Confidence 357888999999999999999974 2599999874432 234679999999999999999999998642 23
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++|||||++|+|.++++.... .+++.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~~-----~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFG 177 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCS
T ss_pred EEEEEEcCCCCCHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeecc
Confidence 6899999999999999976543 499999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccC---CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG---GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
+|+...... .........||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+......
T Consensus 178 la~~~~~~~------~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~------ 245 (307)
T 3omv_A 178 LATVKSRWS------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ------ 245 (307)
T ss_dssp SCBC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH------
T ss_pred CceecccCC------cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH------
Confidence 998764321 1122344579999999999864 4689999999999999999999999976422110
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
+...+ .......... ......+.++.+++.+||+.||++||||+||++.|+.++..+.
T Consensus 246 -------~~~~~----~~~~~~p~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 246 -------IIFMV----GRGYASPDLS------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -------HHHHH----HTTCCCCCST------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -------HHHHH----hcCCCCCCcc------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 00111 0010000000 0011234568899999999999999999999999998876653
No 18
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7.7e-51 Score=442.86 Aligned_cols=265 Identities=26% Similarity=0.420 Sum_probs=205.4
Q ss_pred cCCCCCCccccccceEEEEeEEC-----CCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLG-----ENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
++|.+.++||+|+||+||+|++. .+++.||||+++.......++|.+|+++|++++|||||+++|+|.+ .
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-----G 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----C
Confidence 46677889999999999999874 3688999999976555566789999999999999999999999753 4
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccc---------hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQ---------QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD 824 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 824 (992)
...++|||||++|+|.++++..... ....+++|.+++.|+.|||+||+|||++ +||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 5679999999999999999875422 1124699999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCcc
Q 037275 825 QDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFN 903 (992)
Q Consensus 825 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~ 903 (992)
+++.+||+|||+|+....... ........||+.|||||++.+..|+.++|||||||++|||+| |+.||.+...
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~------~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~ 266 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDY------YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266 (329)
T ss_dssp TTTEEEECCCC----------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH
T ss_pred CCCcEEEcccccceeccCCCc------ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999987643321 112234569999999999999999999999999999999999 9999976422
Q ss_pred CCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 037275 904 QGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRAR 983 (992)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 983 (992)
. +++.....+. ....+. ..+.++.+++.+||+.||++||||+||++.|+.+.
T Consensus 267 ~-----------------~~~~~i~~g~-~~~~p~----------~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 267 T-----------------EAIDCITQGR-ELERPR----------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp H-----------------HHHHHHHHTC-CCCCCT----------TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred H-----------------HHHHHHHcCC-CCCCcc----------cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 1 1111111111 011111 12356889999999999999999999999999986
Q ss_pred Hh
Q 037275 984 DT 985 (992)
Q Consensus 984 ~~ 985 (992)
+.
T Consensus 319 ~~ 320 (329)
T 4aoj_A 319 QA 320 (329)
T ss_dssp HS
T ss_pred hC
Confidence 54
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.2e-51 Score=443.83 Aligned_cols=251 Identities=20% Similarity=0.313 Sum_probs=200.6
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
++|++.+.||+|+||+||+|++..+|+.||||+++.... ...+.+.+|++++++++|||||++++++. +.+.+
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~-----~~~~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE-----ENGSL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE-----ECCEE
Confidence 589999999999999999999999999999999975432 23467899999999999999999999954 45678
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
|+|||||++|+|.+++...+. ..+++.+++.|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~----~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKG----VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred EEEEeCCCCCcHHHHHHHcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccccc
Confidence 999999999999999976542 2578999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhC
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
|+..... .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+...
T Consensus 172 a~~~~~~--------~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------------- 230 (350)
T 4b9d_A 172 ARVLNST--------VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM------------- 230 (350)
T ss_dssp ESCCCHH--------HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-------------
T ss_pred ceeecCC--------cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-------------
Confidence 9865421 1112345799999999999999999999999999999999999999976321
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.+++.......+.. . ......++.+++.+||+.||++|||++|+++
T Consensus 231 ----~~~~~~i~~~~~~~-----~------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 231 ----KNLVLKIISGSFPP-----V------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ----HHHHHHHHHTCCCC-----C------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHcCCCCC-----C------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11122222111110 0 0112345889999999999999999999986
No 20
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.1e-50 Score=436.46 Aligned_cols=261 Identities=24% Similarity=0.293 Sum_probs=207.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.+.|++.++||+|+||+||+|++..+|+.||||+++.... ..+|+.++++++|||||++++++. +...+|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~-----~~~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVR-----EGPWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEE-----ETTEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEE-----ECCEEE
Confidence 3467888899999999999999999999999999974332 247999999999999999999964 456679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC-cEEEeeccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL-VAHLGDFGL 836 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~ 836 (992)
+|||||++|+|.++++... .+++..+..++.||+.||+|||++ +||||||||+|||++.+| .+||+|||+
T Consensus 127 ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQMG------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp EEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred EEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCC
Confidence 9999999999999997643 589999999999999999999999 999999999999999988 699999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhC
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
|+.+....... ........+||+.|||||++.+..|+.++||||+||++|||+||++||.+..... ..........
T Consensus 198 a~~~~~~~~~~---~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~~ 273 (336)
T 4g3f_A 198 ALCLQPDGLGK---SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEPP 273 (336)
T ss_dssp CEEC---------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSCC
T ss_pred CeEccCCCccc---ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCCC
Confidence 99876432211 1112234579999999999999999999999999999999999999998743332 1211111110
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
+ . ... ......++.+++.+||+.||++|||+.|+++.|.++....
T Consensus 274 ~----------------~---~~~------~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 274 P----------------I---REI------PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp G----------------G---GGS------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred C----------------c---hhc------CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 0 0 000 0112345889999999999999999999999998887654
No 21
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.1e-50 Score=435.13 Aligned_cols=261 Identities=25% Similarity=0.399 Sum_probs=206.3
Q ss_pred CCCCCCccccccceEEEEeEEC-----CCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 680 DFSSSNMIGQGSFGFVYKGNLG-----ENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
++++.++||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|.+ .
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-----~ 101 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-----D 101 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----S
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-----C
Confidence 5667789999999999999963 357899999996443 3345789999999999999999999999754 3
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccc----------hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQ----------QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL 823 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 823 (992)
...++|||||++|+|.+++...... .....+++.++++|+.|||+||+|||++ +||||||||+|||+
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLV 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEE
Confidence 4569999999999999999764321 1124689999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCc
Q 037275 824 DQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMF 902 (992)
Q Consensus 824 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~ 902 (992)
++++.+||+|||+|+...... .........||+.|||||++.++.|+.++|||||||++|||+| |+.||.+..
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~------~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~ 252 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAAD------YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGG------CBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred CCCCCEEECCcccceeccCCC------ceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999998664321 1122344579999999999999999999999999999999999 899997642
Q ss_pred cCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 037275 903 NQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRA 982 (992)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 982 (992)
.. +++.....+.. . .. ..+.+.++.+++.+||+.||++||||+||++.|+..
T Consensus 253 ~~-----------------~~~~~i~~~~~-~----~~------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 253 NQ-----------------DVVEMIRNRQV-L----PC------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HH-----------------HHHHHHHTTCC-C----CC------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HH-----------------HHHHHHHcCCC-C----CC------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 21 11111111110 0 01 112345688999999999999999999999998753
No 22
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.5e-50 Score=430.34 Aligned_cols=249 Identities=21% Similarity=0.334 Sum_probs=207.4
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
++|++.++||+|+||+||+|++..+|+.||||++... .....+.+.+|++++++++|||||++++++ .+.+.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF-----QDDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCCE
Confidence 4799999999999999999999999999999999743 344567899999999999999999999995 45667
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
+|+|||||++|+|.+++.+.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 899999999999999998643 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
+|+.+.... ........+||+.|||||++.+..|+.++||||+||++|||+||++||.+...
T Consensus 178 la~~~~~~~------~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------------ 239 (311)
T 4aw0_A 178 TAKVLSPES------KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE------------ 239 (311)
T ss_dssp TCEECCTTT------TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH------------
T ss_pred CceecCCCC------CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------------
Confidence 999875432 12233456899999999999999999999999999999999999999976321
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVV 976 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 976 (992)
.++...+....+.. +. ....++.+++.+||+.||++|||++|++
T Consensus 240 -----~~~~~~i~~~~~~~------p~------~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 240 -----GLIFAKIIKLEYDF------PE------KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -----HHHHHHHHHTCCCC------CT------TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -----HHHHHHHHcCCCCC------Cc------ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11222222221110 00 1134578999999999999999999974
No 23
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.3e-50 Score=424.89 Aligned_cols=249 Identities=25% Similarity=0.388 Sum_probs=197.5
Q ss_pred CCCCccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEEEE
Q 037275 682 SSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQAIV 759 (992)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 759 (992)
++.++||+|+||+||+|.+..+++.||+|++.... ....+.+.+|++++++++|||||++++++... ..+...+++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEEEEE
Confidence 56678999999999999999999999999996443 22346789999999999999999999987542 2335668999
Q ss_pred EEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCCeeeC-CCCcEEEeeccc
Q 037275 760 YEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPP--VVHGDLKPSNVLLD-QDLVAHLGDFGL 836 (992)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfg~ 836 (992)
||||++|+|.+++.+.. .+++..+..++.||+.||+|||++ + ||||||||+|||++ .++.+||+|||+
T Consensus 108 mEy~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGl 178 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTG
T ss_pred EeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcC
Confidence 99999999999997643 589999999999999999999998 6 99999999999997 479999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhC
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
|+.... ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+................
T Consensus 179 a~~~~~----------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~ 247 (290)
T 3fpq_A 179 ATLKRA----------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK 247 (290)
T ss_dssp GGGCCT----------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC
T ss_pred CEeCCC----------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC
Confidence 975432 12234579999999998865 6999999999999999999999999753221110000000000
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.. .......++.+++.+||+.||++|||++|+++
T Consensus 248 ~~~--------------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 248 PAS--------------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CGG--------------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCC--------------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 00011235789999999999999999999975
No 24
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.4e-49 Score=441.86 Aligned_cols=251 Identities=21% Similarity=0.299 Sum_probs=208.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.+.|++.++||+|+||+||+|++..+|+.||||++........+.+.+|+.+|++++|||||++++++. ..+.+|
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-----~~~~~~ 224 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELW 224 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEE-----ECCEEE
Confidence 357999999999999999999999999999999998776667778999999999999999999999964 456789
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+|||||++|+|.++++.. .+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|
T Consensus 225 iVmEy~~gG~L~~~i~~~-------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla 294 (423)
T 4fie_A 225 VVMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 294 (423)
T ss_dssp EEEECCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTC
T ss_pred EEEeCCCCCcHHHHHhcc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccc
Confidence 999999999999999743 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALP 917 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~ 917 (992)
+.+... .......+||+.|||||++.+..|+.++||||+||++|||++|++||.+....
T Consensus 295 ~~~~~~--------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------------- 353 (423)
T 4fie_A 295 AQVSKE--------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------------- 353 (423)
T ss_dssp EECCSS--------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-------------
T ss_pred eECCCC--------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-------------
Confidence 876532 12234568999999999999999999999999999999999999999753111
Q ss_pred hhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 918 DKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.+..+.. .... .. ........++.+++.+||+.||++|||++|+++
T Consensus 354 ----~~~~~i~~-~~~~----~~----~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 354 ----KAMKMIRD-NLPP----RL----KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ----HHHHHHHH-SCCC----CC----SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----HHHHHHHc-CCCC----CC----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111110 0000 00 000112345889999999999999999999986
No 25
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-48 Score=465.55 Aligned_cols=510 Identities=20% Similarity=0.169 Sum_probs=388.8
Q ss_pred cccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeeccccccccc
Q 037275 58 SNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGE 137 (992)
Q Consensus 58 ~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 137 (992)
++.++ ..+|..+. +++++|||++|++++..+..|..+++|++|+|++|++++..|..|+++++|++|++++|+++ .
T Consensus 15 ~~~~l-~~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~ 90 (570)
T 2z63_A 15 MELNF-YKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-S 90 (570)
T ss_dssp CSSCC-SSCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-E
T ss_pred CCCCc-cccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC-c
Confidence 33344 45666543 57999999999999777778999999999999999999766788999999999999999998 5
Q ss_pred CChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccC-CcCCccCCCCcccEEeccCcccccccCcccc
Q 037275 138 IPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWG-RIPNNLGNLRNLILLNLGENRFSGIVPPSIF 216 (992)
Q Consensus 138 ~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 216 (992)
+|+..+.++++|++|++++|.+++..+..++++++|++|++++|.+.+ .+|..|+++++|++|++++|++++..|..+.
T Consensus 91 ~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 170 (570)
T 2z63_A 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 170 (570)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGH
T ss_pred cCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHcc
Confidence 555555588999999999999996656679999999999999999876 4688899999999999999999977778888
Q ss_pred ccCCC----cEEeccCCccCCCCCccccccccccchhhccccccC-CCCchhhhccccCceeeecccccccccccccccc
Q 037275 217 NISSL----ENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFA-GSIPESLSNASNLVELTLFDNQFRGKVSIYFRSL 291 (992)
Q Consensus 217 ~l~~L----~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 291 (992)
.+++| +.|++++|.+.+..| ..+... +|+.+++++|... ..++..+..+++++.+.+..+.+.. .
T Consensus 171 ~l~~L~~~~~~L~l~~n~l~~~~~-~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~--------~ 240 (570)
T 2z63_A 171 VLHQMPLLNLSLDLSLNPMNFIQP-GAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN--------E 240 (570)
T ss_dssp HHHTCTTCCCEEECTTCCCCEECT-TTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCC--------C
T ss_pred chhccchhhhhcccCCCCceecCH-HHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccC--------c
Confidence 88888 888999888874333 333222 5555655555332 1234445555555544443322110 0
Q ss_pred CccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCC-cCCCcCCcccccccccceeEEeeCCccccccCCCccCC
Q 037275 292 KNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDN-RFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNL 370 (992)
Q Consensus 292 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l 370 (992)
+.+..++...+.. +..+ .++.++++++ .+.+..|..+..+. +|+.|++++|.++ .+|..+..+
T Consensus 241 ----------~~l~~~~~~~~~~---l~~l-~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~l~-~l~~~~~~~ 304 (570)
T 2z63_A 241 ----------GNLEKFDKSALEG---LCNL-TIEEFRLAYLDYYLDDIIDLFNCLT-NVSSFSLVSVTIE-RVKDFSYNF 304 (570)
T ss_dssp ----------SSCEECCTTTTGG---GGGS-EEEEEEEEETTEEESCSTTTTGGGT-TCSEEEEESCEEC-SCCBCCSCC
T ss_pred ----------hhhhhcchhhhcc---cccc-chhhhhhhcchhhhhhchhhhcCcC-cccEEEecCccch-hhhhhhccC
Confidence 1111122221211 1111 3566666666 66666666666554 5788888888877 466677777
Q ss_pred CcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCC--CCCcccccccccc
Q 037275 371 VNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSI--PPSLGNCKNLIEL 448 (992)
Q Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L 448 (992)
+|++|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|+.|++++|++++.. |..+..+++|++|
T Consensus 305 -~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L 378 (570)
T 2z63_A 305 -GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYL 378 (570)
T ss_dssp -CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEE
T ss_pred -CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEE
Confidence 8888888888887 4554 4677888888888887765554 67788888888888887543 5667778888888
Q ss_pred ccccccccccCchhhhhhcccccccccccccccCccc-ccccCCCCccEEeeecccccccCCcccccccccceeeccCCc
Q 037275 449 HMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLP-LEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNS 527 (992)
Q Consensus 449 ~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 527 (992)
++++|.+++. |.. +.....++.|++++|.+++..+ ..+..+++|++|++++|.+++..|..|.++++|++|+|++|+
T Consensus 379 ~l~~n~l~~~-~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 456 (570)
T 2z63_A 379 DLSFNGVITM-SSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 456 (570)
T ss_dssp ECCSCSEEEE-EEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCE
T ss_pred ECCCCccccc-ccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCc
Confidence 8888888743 333 4445566778999999887665 578999999999999999999999999999999999999999
Q ss_pred cc-ccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCC-CCccCCcccccccCCCCcCCCCC
Q 037275 528 FS-GSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPT-KGVFSNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 528 l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~l~~N~~~C~~~~ 605 (992)
++ +.+|..+..+++|++|+|++|++++..|..|..+++|++|++++|++++.++. ...++.++.+++.+|++.|.|+.
T Consensus 457 l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 457 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 98 57899999999999999999999998899999999999999999999998775 35678899999999999998865
No 26
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.7e-49 Score=415.93 Aligned_cols=247 Identities=28% Similarity=0.387 Sum_probs=189.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||+||+|++..+|+.||||+++... ......+.+|++++++++|||||++++++ .+.+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~-----~~~~ 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKD 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EECC
Confidence 468999999999999999999999999999999996432 33456789999999999999999999995 4456
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+ +|+|.+++.+.. .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DF 156 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHHSC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCS
T ss_pred EEEEEEeCC-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeec
Confidence 789999999 679999997643 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
|+|+...... .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.+... .
T Consensus 157 Gla~~~~~~~---------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-----~---- 218 (275)
T 3hyh_A 157 GLSNIMTDGN---------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----P---- 218 (275)
T ss_dssp SCC------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----H----
T ss_pred CCCeecCCCC---------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-----H----
Confidence 9998654321 2234579999999999998876 5799999999999999999999975311 1
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.+........+. .+. ....++.+++.+||+.||++|||++|+++
T Consensus 219 --------~~~~~i~~~~~~--~p~----------~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 219 --------VLFKNISNGVYT--LPK----------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --------HHHHHHHHTCCC--CCT----------TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --------HHHHHHHcCCCC--CCC----------CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111111111110 000 11345789999999999999999999986
No 27
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=7.9e-49 Score=424.65 Aligned_cols=285 Identities=23% Similarity=0.296 Sum_probs=206.8
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQAI 758 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 758 (992)
++|.+.++||+|+||+||+|++ +|+.||||+++.... .......|+..+.+++|||||+++|+|.+.+ ......++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 3577889999999999999998 589999999864321 1222344566667889999999999986532 22346799
Q ss_pred EEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 759 VYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHH-----CQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
|||||++|+|.++++.. .+++..+.+++.|+++||+|||++ ..++||||||||+|||++.++.+||+|
T Consensus 79 V~Ey~~~gsL~~~l~~~-------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EecCCCCCcHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 99999999999999753 489999999999999999999975 245899999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCC------CcCcccchhhHHHHHHHHHhCCCCCCCCccCCcc
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG------EASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLT 907 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~ 907 (992)
||+|+........ ........+||+.|||||++.+. .++.++|||||||++|||+||++||....+....
T Consensus 152 FGla~~~~~~~~~----~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 152 LGLAVRHDSATDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp CTTCEEEETTTTE----ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred CCCCccccCCCCc----eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 9999876543211 11122345799999999998754 4788999999999999999999888654333222
Q ss_pred HHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 908 LHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
+....... .....+....... ..+..........+....+.+++.+||+.||++||||.||++.|+++.++
T Consensus 228 ~~~~~~~~--~~~~~~~~~~~~~-----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 228 YYDLVPSD--PSVEEMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp TTTTSCSS--CCHHHHHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred chhccccc--chHHHHHHHHhcc-----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 21111100 0111111111100 11111112223345667899999999999999999999999999998765
No 28
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.6e-48 Score=470.01 Aligned_cols=514 Identities=18% Similarity=0.164 Sum_probs=345.9
Q ss_pred cCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccc
Q 037275 75 FLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTI 154 (992)
Q Consensus 75 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L 154 (992)
++++|||++|+|++..|.+|.++++|++|+|++|+|++..|..|+++++|++|+|++|+++ .+|...+.++++|++|+|
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEEC
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEEC
Confidence 4566666666666434445666666666666666666434445666666666666666665 455555556666666666
Q ss_pred cccccCCCCCCccccccccceEEecCCcccC-CcCCccCCCCcccEEeccCcccccccCccccccCCCc----EEeccCC
Q 037275 155 ADNHLTGHFPASIGNLSTLERINVLGNGLWG-RIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLE----NVFLPTN 229 (992)
Q Consensus 155 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~----~L~l~~N 229 (992)
++|++++..+..|+++++|++|++++|.+.+ ..|..++.+++|++|+|++|++++..|..+..+.+++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 6666665444556666666666666666643 2455556666666666666666655555555444332 4555666
Q ss_pred ccCCCCCccccccccccchhhccccccC-------------------------------CCCchhhhccccCceeeeccc
Q 037275 230 RFNGSLPLDIGVSLPKLLGFIVAENNFA-------------------------------GSIPESLSNASNLVELTLFDN 278 (992)
Q Consensus 230 ~l~~~~~~~~~~~~~~L~~l~l~~n~l~-------------------------------~~~p~~l~~l~~L~~L~L~~N 278 (992)
.+. .++...+. ...+..+.+.+|... ......+..+..+..+++..+
T Consensus 212 ~l~-~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 212 PMN-FIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp CCC-EECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred ccc-ccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 555 22222221 112233333333222 222233444444444444443
Q ss_pred ccc---ccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEee
Q 037275 279 QFR---GKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIA 355 (992)
Q Consensus 279 ~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~ 355 (992)
... ......+..+.+++.+.+.+|.+..+. .+.....|+.|++.+|.+.+..+..+ ..++.+.+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--------~~~~~~~L~~L~l~~~~~~~~~~~~l----~~L~~l~l~ 357 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--------DFSYNFGWQHLELVNCKFGQFPTLKL----KSLKRLTFT 357 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--------GGGSCCCCSEEEEESCEESSCCCCBC----TTCCEEEEE
T ss_pred hhcccccchhhhhhhhccccccccccccccccc--------ccccchhhhhhhcccccccCcCcccc----hhhhhcccc
Confidence 322 122334556667777777777665432 35556778888888888876655433 347778888
Q ss_pred CCccccccCCCccCCCcccEEEccCCcCCC--CCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccC
Q 037275 356 GNQISGIIPTGIRNLVNLVELCMDDNKLTG--TIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQG 433 (992)
Q Consensus 356 ~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 433 (992)
+|.+... .....+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+++|+.++++.|.+..
T Consensus 358 ~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~ 434 (635)
T 4g8a_A 358 SNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ 434 (635)
T ss_dssp SCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEES
T ss_pred cccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccc
Confidence 8887643 334578899999999998853 45667778889999999999887 456678888999999998887765
Q ss_pred CCC-CCccccccccccccccccccccCchhhhhhccccccccccccccc-CcccccccCCCCccEEeeecccccccCCcc
Q 037275 434 SIP-PSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLS-GTLPLEVGNLKNLVYFNISVNRFSGEIPVT 511 (992)
Q Consensus 434 ~~~-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 511 (992)
..+ ..|..+++++.++++.|.+.+. ++..+.....++.|++++|.+. +..|..|..+++|++|+|++|+|++..|..
T Consensus 435 ~~~~~~~~~l~~l~~l~ls~n~l~~~-~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~ 513 (635)
T 4g8a_A 435 MSEFSVFLSLRNLIYLDISHTHTRVA-FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 513 (635)
T ss_dssp TTSSCTTTTCTTCCEEECTTSCCEEC-CTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred cccccccccccccccccccccccccc-cccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHH
Confidence 443 4678889999999999998854 4455555666778899998754 457788999999999999999999888999
Q ss_pred cccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcC-CCcceEecCCCcCcccCCCCCccCCcc
Q 037275 512 LSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENL-SFLEYLNLSYNHFEGEVPTKGVFSNKT 590 (992)
Q Consensus 512 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~~~~~ 590 (992)
|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+ ++|++|+|++|+|.|.|...+...|++
T Consensus 514 f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl~ 593 (635)
T 4g8a_A 514 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIK 593 (635)
T ss_dssp TTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHHH
T ss_pred HcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHHH
Confidence 9999999999999999998888889999999999999999999989989888 689999999999999998655544443
Q ss_pred cc---cccCCCCcCCCCCCC
Q 037275 591 GI---SLSGNGKVCGGLDEL 607 (992)
Q Consensus 591 ~~---~l~~N~~~C~~~~~~ 607 (992)
.. ........|+.|...
T Consensus 594 ~~~~~~~~~~~~~C~~P~~~ 613 (635)
T 4g8a_A 594 DQRQLLVEVERMECATPSDK 613 (635)
T ss_dssp HTTTTBSCGGGCBBCSSTTT
T ss_pred hCCCccCCCCCceeCCchHH
Confidence 21 112234678887654
No 29
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.4e-49 Score=431.02 Aligned_cols=272 Identities=22% Similarity=0.337 Sum_probs=213.8
Q ss_pred HHHHhcCCCCCCccccccceEEEEeEECCC-----CeEEEEEEeeccCC-CchhHHHHHHHHHHhccC-CcceeEEEEee
Q 037275 674 LSKATNDFSSSNMIGQGSFGFVYKGNLGEN-----GMMVAVKVINLKQK-GASNGFVAECQALRNIRH-RNLIKIITICS 746 (992)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~~~ 746 (992)
.+...++|++.+.||+|+||+||+|++... ++.||||+++.... ...+.+.+|++++++++| ||||+++|+|.
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 334567899999999999999999997533 46899999964433 234678999999999965 89999999974
Q ss_pred cccccCcceEEEEEEeccCCCHHHHHhhcccc----------hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccC
Q 037275 747 SIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQ----------QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDL 816 (992)
Q Consensus 747 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dl 816 (992)
. .....++|||||++|+|.++++..... .....+++.++..++.|||+||+|||++ +||||||
T Consensus 139 ~----~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 139 K----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp C----TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred e----cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 3 334569999999999999999865431 1124589999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CC
Q 037275 817 KPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RR 895 (992)
Q Consensus 817 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~ 895 (992)
||+|||+++++.+||+|||+|+....+.. ........||+.|||||++.+..|+.++|||||||++|||+| |+
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~------~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTT------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCC------ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCC
Confidence 99999999999999999999987654321 112234568999999999999999999999999999999998 99
Q ss_pred CCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 037275 896 RPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDV 975 (992)
Q Consensus 896 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 975 (992)
.||.+..... .+...+. .......+. ....++.+++.+||+.||++|||++||
T Consensus 286 ~Pf~~~~~~~-------------~~~~~i~----~g~~~~~p~----------~~~~~~~~li~~c~~~dP~~RPt~~ei 338 (353)
T 4ase_A 286 SPYPGVKIDE-------------EFCRRLK----EGTRMRAPD----------YTTPEMYQTMLDCWHGEPSQRPTFSEL 338 (353)
T ss_dssp CSSTTCCCSH-------------HHHHHHH----HTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCCHHH-------------HHHHHHH----cCCCCCCCc----------cCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence 9998643221 1111111 111111111 123458899999999999999999999
Q ss_pred HHHHHHHHHh
Q 037275 976 VAKLCRARDT 985 (992)
Q Consensus 976 l~~L~~~~~~ 985 (992)
++.|+++.+.
T Consensus 339 l~~L~~llq~ 348 (353)
T 4ase_A 339 VEHLGNLLQA 348 (353)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 30
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.8e-48 Score=468.98 Aligned_cols=515 Identities=17% Similarity=0.205 Sum_probs=378.3
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCCcCCCCC----CceEe-eEEcCC--CCeEEEeeccccccCCccCCCCCCCCcCC
Q 037275 5 SNETDRLALLAIGSQLEDDPLGVTSSWNNSTNL----CQWTG-VTCGHR--HQRVTKLDLSNRTIGGTLSPYVGNLSFLR 77 (992)
Q Consensus 5 ~~~~~~~~ll~~~~~~~~~~~~~~~~w~~~~~~----c~w~g-v~c~~~--~~~v~~ldl~~~~l~~~l~~~l~~l~~L~ 77 (992)
...++.+.-.|+++-...- .-..|....+. |.|.. ..|..= ...|+. | .-.+++
T Consensus 24 ~~~~~~~d~~aL~~~~~~~---~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C-~---------------~~~~V~ 84 (636)
T 4eco_A 24 RTAEYIKDYLALKEIWDAL---NGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL-N---------------SNGRVT 84 (636)
T ss_dssp CCCHHHHHHHHHHHHHHHT---TGGGCCCCC------CCCCCSSCGGGTTCCTTEEE-C---------------TTCCEE
T ss_pred hhhhHHHHHHHHHHHHHHc---CCCCcccCCcCCccCCCCCCCCCcccccCCCCeEE-c---------------CCCCEE
Confidence 3455566777777776432 12578644322 47852 222211 011221 1 014789
Q ss_pred eeeccCCCCCccCCccccCCCCCCEEEeecccC------CC------CCCcccccCCCCcEeecccccccccCChhhccc
Q 037275 78 YLNLADNNFHGEIPHQIGRLVRLEALVLANNSF------SG------KIPTNLSRCSNLISFNARRNNLVGEIPAELGYN 145 (992)
Q Consensus 78 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l------~~------~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~ 145 (992)
.|+|++|++.|.+|++|+.|++|++|+|++|.+ .| .+|... +..|+ ++++.|.+.+.+|..+...
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~ 161 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDL 161 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHH
Confidence 999999999999999999999999999999987 33 445444 55666 8888888888888777655
Q ss_pred ccccccccccccccCCCCCCccccccccceEEe--cCCcccCCcCCccCCCCcccEEeccCcccccc-------------
Q 037275 146 WLKLENLTIADNHLTGHFPASIGNLSTLERINV--LGNGLWGRIPNNLGNLRNLILLNLGENRFSGI------------- 210 (992)
Q Consensus 146 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l--~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~------------- 210 (992)
+.++..+++....+.. .....++.+.+ .+|++.+ +|..|+++++|++|+|++|++++.
T Consensus 162 ~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~ 234 (636)
T 4eco_A 162 IKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEY 234 (636)
T ss_dssp HHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHH
T ss_pred HHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccch
Confidence 5666666666544432 12223443433 3688888 999999999999999999999985
Q ss_pred ----cCcccc--ccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeecccc-ccc-
Q 037275 211 ----VPPSIF--NISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQ-FRG- 282 (992)
Q Consensus 211 ----~p~~l~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~- 282 (992)
+|..++ ++++|++|++++|++.+. +|..|+++++|++|++++|+ +++
T Consensus 235 ~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~-------------------------~p~~l~~l~~L~~L~Ls~n~~l~~~ 289 (636)
T 4eco_A 235 AQQYKTEDLKWDNLKDLTDVEVYNCPNLTK-------------------------LPTFLKALPEMQLINVACNRGISGE 289 (636)
T ss_dssp HHHHTTSCCCGGGCTTCCEEEEECCTTCSS-------------------------CCTTTTTCSSCCEEECTTCTTSCHH
T ss_pred hcccCchhhhhcccCCCCEEEecCCcCCcc-------------------------ChHHHhcCCCCCEEECcCCCCCccc
Confidence 899999 999999999999988754 45566677777777777777 776
Q ss_pred ccccccccc------CccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeC
Q 037275 283 KVSIYFRSL------KNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAG 356 (992)
Q Consensus 283 ~~~~~~~~l------~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~ 356 (992)
..|..+..+ ++|++|+|++|+++.++. ...+.++++|+.|++++|++.|.+| .+..+. +|++|++++
T Consensus 290 ~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~-----~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~-~L~~L~L~~ 362 (636)
T 4eco_A 290 QLKDDWQALADAPVGEKIQIIYIGYNNLKTFPV-----ETSLQKMKKLGMLECLYNQLEGKLP-AFGSEI-KLASLNLAY 362 (636)
T ss_dssp HHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCC-----HHHHTTCTTCCEEECCSCCCEEECC-CCEEEE-EESEEECCS
T ss_pred cchHHHHhhhccccCCCCCEEECCCCcCCccCc-----hhhhccCCCCCEEeCcCCcCccchh-hhCCCC-CCCEEECCC
Confidence 666666665 778888888887775442 0135667777777777777777777 565554 577788888
Q ss_pred CccccccCCCccCCCc-ccEEEccCCcCCCCCCccccCCC--CCcEEeccCccccccCCCCCC-------CccccCceec
Q 037275 357 NQISGIIPTGIRNLVN-LVELCMDDNKLTGTIPHAIGELK--NLQLLYLDSNFLAGGIPTSLG-------NLTLLTNLAL 426 (992)
Q Consensus 357 n~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L 426 (992)
|+++ .+|..+..+++ |++|++++|+++ .+|..+..+. +|+.|++++|++++..|..|. .+++|+.|+|
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~L 440 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEEC
T ss_pred Cccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEEC
Confidence 8877 66777888888 888888888887 6777776654 788888888888877777777 6777888888
Q ss_pred cCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccc
Q 037275 427 SSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSG 506 (992)
Q Consensus 427 ~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 506 (992)
++|+++...+..+..+++|++|++++|+++ .+|...+.. .+..+.++++|++|+|++|+++
T Consensus 441 s~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~-----------------~~~~~~~l~~L~~L~Ls~N~l~- 501 (636)
T 4eco_A 441 SNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKD-----------------ENENFKNTYLLTSIDLRFNKLT- 501 (636)
T ss_dssp CSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEE-----------------TTEECTTGGGCCEEECCSSCCC-
T ss_pred cCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhcc-----------------ccccccccCCccEEECcCCcCC-
Confidence 888887433333455777777777776666 444332211 0112334569999999999999
Q ss_pred cCCcccc--cccccceeeccCCcccccCCccccccCCCCEEEC------CCcccCCCChhhhhcCCCcceEecCCCcCcc
Q 037275 507 EIPVTLS--ACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDM------SSNNLSGQIPEYLENLSFLEYLNLSYNHFEG 578 (992)
Q Consensus 507 ~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 578 (992)
.+|..+. .+++|+.|+|++|+|++ +|..+.++++|++|+| ++|++.+.+|..+..+++|+.|+|++|++.
T Consensus 502 ~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~- 579 (636)
T 4eco_A 502 KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR- 579 (636)
T ss_dssp BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-
T ss_pred ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-
Confidence 6788886 99999999999999997 8999999999999999 568889999999999999999999999994
Q ss_pred cCCCCCccCCcccccccCCCCcCCCC
Q 037275 579 EVPTKGVFSNKTGISLSGNGKVCGGL 604 (992)
Q Consensus 579 ~~~~~~~~~~~~~~~l~~N~~~C~~~ 604 (992)
.+|.. .++.++.+++++|++.|-..
T Consensus 580 ~ip~~-~~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 580 KVNEK-ITPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp BCCSC-CCTTCCEEECCSCTTCEEEC
T ss_pred ccCHh-HhCcCCEEECcCCCCccccH
Confidence 55543 44889999999999988543
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.4e-48 Score=455.93 Aligned_cols=482 Identities=17% Similarity=0.154 Sum_probs=318.3
Q ss_pred EEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccc
Q 037275 53 TKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRN 132 (992)
Q Consensus 53 ~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n 132 (992)
+.+|++++++. .+|+.+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+.+++|++|++++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 36899999985 6887776 89999999999999766778999999999999999999777889999999999999999
Q ss_pred cccccCChhhcccccccccccccccccCC-CCCCccccccccceEEecCCcccCCcCCccCCCCcc--cEEeccCccc--
Q 037275 133 NLVGEIPAELGYNWLKLENLTIADNHLTG-HFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNL--ILLNLGENRF-- 207 (992)
Q Consensus 133 ~l~~~~p~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L--~~L~L~~n~l-- 207 (992)
+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+.+ ..+..+++| +.|++++|++
T Consensus 80 ~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 998 77776 67889999999999886 467888889999999999988855 356677777 8888888888
Q ss_pred ccccCccccccC-CCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeecccc-------
Q 037275 208 SGIVPPSIFNIS-SLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQ------- 279 (992)
Q Consensus 208 ~~~~p~~l~~l~-~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~------- 279 (992)
.+..|..+..+. +...+++++|++.+.++... +.++++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~------------------------~~~l~~L~~L~l~~n~~~~~~~~ 208 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVS------------------------VKTVANLELSNIKCVLEDNKCSY 208 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCC------------------------CTTCSEEEECCEEECCSTTTTHH
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhh------------------------hhcccceeeccccccccccccce
Confidence 667777777665 34455666776665555444 4445555555555554
Q ss_pred ccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCcc
Q 037275 280 FRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQI 359 (992)
Q Consensus 280 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i 359 (992)
+.+.++ .|..+++|+.|++++|.++.... ..+......++ |++|++++|++
T Consensus 209 ~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~---~~~~~~~~~~~-------------------------L~~L~l~~n~l 259 (520)
T 2z7x_B 209 FLSILA-KLQTNPKLSNLTLNNIETTWNSF---IRILQLVWHTT-------------------------VWYFSISNVKL 259 (520)
T ss_dssp HHHHHH-GGGGCTTCCEEEEEEEEEEHHHH---HHHHHHHHTSS-------------------------CSEEEEEEEEE
T ss_pred eecchh-hhccccchhhccccccccCHHHH---HHHHHHhhhCc-------------------------ccEEEeecccc
Confidence 443333 45555555555555554432100 00000001123 44444444444
Q ss_pred ccccCCCc-----cCCCcccEEEccCCcCCCCCC-ccccCC---CCCcEEeccCccccccCCCCCCCccccCceeccCCc
Q 037275 360 SGIIPTGI-----RNLVNLVELCMDDNKLTGTIP-HAIGEL---KNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSND 430 (992)
Q Consensus 360 ~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 430 (992)
++.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|++++|+
T Consensus 260 ~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~ 335 (520)
T 2z7x_B 260 QGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNL 335 (520)
T ss_dssp ESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSC
T ss_pred cCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCc
Confidence 44444444 5555566666666655 223 333333 45666666666554221 12455556666666666
Q ss_pred ccCCCCCCccccccccccccccccccc--cCchhhhhhcccccccccccccccCcccc-cccCCCCccEEeeeccccccc
Q 037275 431 LQGSIPPSLGNCKNLIELHMADIELTG--ALPPQILSISTLSLSLDLSYNLLSGTLPL-EVGNLKNLVYFNISVNRFSGE 507 (992)
Q Consensus 431 l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~~~~~~~~L~l~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~ 507 (992)
+++..|..+..+++|++|++++|++++ .+|.. +.....++.|++++|.+++.+|. .+..+++|++|++++|++++.
T Consensus 336 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 414 (520)
T 2z7x_B 336 LTDTVFENCGHLTELETLILQMNQLKELSKIAEM-TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414 (520)
T ss_dssp CCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHH-HTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGG
T ss_pred cChhhhhhhccCCCCCEEEccCCccCccccchHH-HhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcc
Confidence 665555556666666666555555553 22222 22233344557777777764554 377888899999999998877
Q ss_pred CCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCCc-c
Q 037275 508 IPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGV-F 586 (992)
Q Consensus 508 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~ 586 (992)
.|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|++|++++|+++|.|+..+. .
T Consensus 415 ~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~ 491 (520)
T 2z7x_B 415 IFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 491 (520)
T ss_dssp GGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHH
T ss_pred hhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCchHHHH
Confidence 776664 68899999999988 7787777889999999999999843334488888899999999999888875433 2
Q ss_pred CCcccc-cccCCCCcCCCCC
Q 037275 587 SNKTGI-SLSGNGKVCGGLD 605 (992)
Q Consensus 587 ~~~~~~-~l~~N~~~C~~~~ 605 (992)
.++... ........|+.|.
T Consensus 492 ~~~~~~~~~~~~~~~C~~p~ 511 (520)
T 2z7x_B 492 RWLNKNSQKEQGSAKCSGSG 511 (520)
T ss_dssp HHHHHTTTTEESCCBBTTTC
T ss_pred HHHHhccccCCCCCCcCCcc
Confidence 222111 1122445677653
No 32
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.9e-48 Score=417.62 Aligned_cols=264 Identities=23% Similarity=0.386 Sum_probs=192.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccc------
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDF------ 750 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 750 (992)
.++|++.+.||+|+||+||+|+++.+|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 4578999999999999999999999999999999975443 234678999999999999999999998765331
Q ss_pred -cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcE
Q 037275 751 -KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVA 829 (992)
Q Consensus 751 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 829 (992)
....+.|+|||||++|+|.+++...... ...++..++.++.||++||+|||++ +|+||||||+|||++.++.+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTI---EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSG---GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCC---ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 2344579999999999999999865432 2356777899999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCCCc----ccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCC
Q 037275 830 HLGDFGLAKFLSSSPLDTAV----ETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQG 905 (992)
Q Consensus 830 kl~Dfg~a~~~~~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~ 905 (992)
||+|||+|+........... .........+||+.|||||++.+..|+.++||||+||++|||++ ||....+..
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~ 234 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV 234 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH
Confidence 99999999987654321111 11122345679999999999999999999999999999999996 775421110
Q ss_pred ccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 906 LTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..+........|. ...+......+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~p~---------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTLTDVRNLKFPP---------------------------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHTTCCCH---------------------------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhcCCCCC---------------------------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000000001110 11122344678999999999999999999986
No 33
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.1e-47 Score=457.64 Aligned_cols=486 Identities=18% Similarity=0.223 Sum_probs=325.2
Q ss_pred CCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccccccccccccc
Q 037275 76 LRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIA 155 (992)
Q Consensus 76 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~ 155 (992)
..+.|+++|+++ .+|..+. ++|++|+|++|++++..|..|+.+++|++|++++|++++..|..+ ..+++|++|+|+
T Consensus 7 ~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~-~~l~~L~~L~Ls 82 (549)
T 2z81_A 7 SGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAF-YSLGSLEHLDLS 82 (549)
T ss_dssp TSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTT-TTCTTCCEEECT
T ss_pred CceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhc-cccccCCEEECC
Confidence 345688888888 7887664 789999999999987777888888888888888888874333333 467778888888
Q ss_pred ccccCCCCCCccccccccceEEecCCcccC-CcCCccCCCCcccEEeccCcccccccC-ccccccCCCcEEeccCCccCC
Q 037275 156 DNHLTGHFPASIGNLSTLERINVLGNGLWG-RIPNNLGNLRNLILLNLGENRFSGIVP-PSIFNISSLENVFLPTNRFNG 233 (992)
Q Consensus 156 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~l~~N~l~~ 233 (992)
+|.+++..|..|+++++|++|++++|.+.+ ..|..++++++|++|++++|++.+.+| ..+.++++|++|++++|++++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 888776666667777778888887777754 345677777777777777777333343 567777777777777777664
Q ss_pred CCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCch
Q 037275 234 SLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLD 313 (992)
Q Consensus 234 ~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 313 (992)
. +|..++.+++|++|++++|.+.......+..+++|++|++++|+++..+....
T Consensus 163 ~-------------------------~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~- 216 (549)
T 2z81_A 163 Y-------------------------QSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPL- 216 (549)
T ss_dssp E-------------------------CTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCC-
T ss_pred c-------------------------ChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccccccccc-
Confidence 3 34445555555555555555553333333445555555555555554322111
Q ss_pred hhhhccCCCcceEeecCCCcCCCcCCccccc---ccccceeEEeeCCcccccc------CCCccCCCcccEEEccCCcCC
Q 037275 314 FLTLLTNCTELTAIGLDDNRFGGVLPHSIAN---LSSTMTDIVIAGNQISGII------PTGIRNLVNLVELCMDDNKLT 384 (992)
Q Consensus 314 ~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~---l~~~L~~L~l~~n~i~~~~------~~~~~~l~~L~~L~L~~N~l~ 384 (992)
.....+++|+.|++++|.+.+..+..+.. ....++.+++++|.+.+.. ...+..+.+|+.|++.++.+.
T Consensus 217 --~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~ 294 (549)
T 2z81_A 217 --PVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIP 294 (549)
T ss_dssp --SSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCS
T ss_pred --chhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccc
Confidence 11233455555666665555443332221 1124555666666555421 123445566666666666554
Q ss_pred CC-----CCccccCCCCCcEEeccCccccccCCCCC-CCccccCceeccCCcccCCC---CCCccccccccccccccccc
Q 037275 385 GT-----IPHAIGELKNLQLLYLDSNFLAGGIPTSL-GNLTLLTNLALSSNDLQGSI---PPSLGNCKNLIELHMADIEL 455 (992)
Q Consensus 385 ~~-----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~l~~n~l 455 (992)
.. .+..+....+|+.|++++|+++ .+|..+ ..+++|++|++++|++++.. +..++.+++|++|++++|++
T Consensus 295 ~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l 373 (549)
T 2z81_A 295 QFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHL 373 (549)
T ss_dssp CGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCC
T ss_pred hhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcc
Confidence 21 1122233456666777766665 444443 35666667777777666543 23356666677777777766
Q ss_pred cccCc-hhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCc
Q 037275 456 TGALP-PQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPS 534 (992)
Q Consensus 456 ~~~~p-~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 534 (992)
++..+ ...+.....++.|++++|+++ .+|..+..+++|++|++++|++++ +|..+. ++|++|+|++|+|++.+
T Consensus 374 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~-- 447 (549)
T 2z81_A 374 RSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS-- 447 (549)
T ss_dssp CCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC--
T ss_pred cccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc--
Confidence 63221 133444455666788888888 678889999999999999999984 454442 58999999999999643
Q ss_pred cccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCC-CCccCCcccccccCCCCcCCCC
Q 037275 535 SLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPT-KGVFSNKTGISLSGNGKVCGGL 604 (992)
Q Consensus 535 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~l~~N~~~C~~~ 604 (992)
..+++|++|+|++|+|+ .+|. ...+++|++|+|++|++++.+|. ...++.++.+++.+|+|.|+|+
T Consensus 448 --~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 448 --LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp --CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred --ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 57899999999999999 6665 46799999999999999998876 4677889999999999999885
No 34
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.2e-48 Score=417.90 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=191.1
Q ss_pred cCCCCCCccccccceEEEEeEEC---CCCeEEEEEEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLG---ENGMMVAVKVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
++|++.+.||+|+||+||+|+.. .+++.||||+++... ......+.+|++++++++|||||++++++. +.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-----~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ-----TE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE-----ET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----EC
Confidence 47999999999999999999873 467899999996432 223456889999999999999999999954 45
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
+..|+|||||++|+|.+++.+.. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+|.+||+|
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 67899999999999999998643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||+|+..... .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....
T Consensus 170 FGla~~~~~~--------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------- 232 (304)
T 3ubd_A 170 FGLSKESIDH--------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--------- 232 (304)
T ss_dssp SEEEEC-------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------
T ss_pred cccceeccCC--------CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH---------
Confidence 9999865432 12233467999999999999999999999999999999999999999763211
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM 972 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 972 (992)
+.+.......+. .+. ....++.+++.+||+.||++|||+
T Consensus 233 --------~~~~~i~~~~~~--~p~----------~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 233 --------ETMTMILKAKLG--MPQ----------FLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --------HHHHHHHHCCCC--CCT----------TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred --------HHHHHHHcCCCC--CCC----------cCCHHHHHHHHHHcccCHHHCCCC
Confidence 111111111110 000 113458899999999999999995
No 35
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.4e-47 Score=461.25 Aligned_cols=470 Identities=19% Similarity=0.217 Sum_probs=367.0
Q ss_pred CcCCeeeccCCCCCccCCccccCCCCCCEEEe-ecccCCCCCCcccccCC-CCc-----Eeec----------ccccccc
Q 037275 74 SFLRYLNLADNNFHGEIPHQIGRLVRLEALVL-ANNSFSGKIPTNLSRCS-NLI-----SFNA----------RRNNLVG 136 (992)
Q Consensus 74 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~l~~l~-~L~-----~L~l----------~~n~l~~ 136 (992)
.+++.|+|++|++.|.+|++|+.|++|++|+| ++|.++|..|-...... .+. .+.. ...++.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 99999877553321110 000 0000 0000000
Q ss_pred cCC----------hhhcccccccccccccc--cccCCCCCCccccccccceEEecCCcccC-----------------Cc
Q 037275 137 EIP----------AELGYNWLKLENLTIAD--NHLTGHFPASIGNLSTLERINVLGNGLWG-----------------RI 187 (992)
Q Consensus 137 ~~p----------~~~~~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-----------------~~ 187 (992)
.++ .........++.+.+.. |.+++ +|..|+++++|++|+|++|.+.+ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 000 00001234566666655 99997 89999999999999999999987 39
Q ss_pred CCccC--CCCcccEEeccCcccccccCccccccCCCcEEeccCCc-cCC-CCCccccccccccchhhccccccCCCCchh
Q 037275 188 PNNLG--NLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNR-FNG-SLPLDIGVSLPKLLGFIVAENNFAGSIPES 263 (992)
Q Consensus 188 ~~~l~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~-l~~-~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~ 263 (992)
|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+.. ++..
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~------------------L~~~ 543 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR------------------LADD 543 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHH------------------HHHC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHh------------------hhhc
Confidence 99988 99999999999999999999999999999999999998 775 44433220 0112
Q ss_pred hhccccCceeeeccccccccccc--cccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcc
Q 037275 264 LSNASNLVELTLFDNQFRGKVSI--YFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHS 341 (992)
Q Consensus 264 l~~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~ 341 (992)
+..+++|++|+|++|+++ .+|. .|.++++|++|+|++|+++.++ .+..+++|+.|++++|++. .+|..
T Consensus 544 ~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp--------~~~~L~~L~~L~Ls~N~l~-~lp~~ 613 (876)
T 4ecn_A 544 EDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLE--------AFGTNVKLTDLKLDYNQIE-EIPED 613 (876)
T ss_dssp TTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCC--------CCCTTSEESEEECCSSCCS-CCCTT
T ss_pred ccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccch--------hhcCCCcceEEECcCCccc-cchHH
Confidence 334459999999999999 6676 8999999999999999998655 3788899999999999999 88988
Q ss_pred cccccccceeEEeeCCccccccCCCccCCCc--ccEEEccCCcCCCCCCccc---c--CCCCCcEEeccCccccccCCCC
Q 037275 342 IANLSSTMTDIVIAGNQISGIIPTGIRNLVN--LVELCMDDNKLTGTIPHAI---G--ELKNLQLLYLDSNFLAGGIPTS 414 (992)
Q Consensus 342 ~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~ 414 (992)
+..+..+|+.|+|++|+++ .+|..+..+.. |+.|+|++|++.+.+|... . .+++|+.|+|++|+++ .+|..
T Consensus 614 l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~ 691 (876)
T 4ecn_A 614 FCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTE 691 (876)
T ss_dssp SCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHH
T ss_pred HhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHH
Confidence 9888766999999999999 67888887755 9999999999998766432 2 3458999999999999 55554
Q ss_pred -CCCccccCceeccCCcccCCCCCCcccc--------ccccccccccccccccCchhhhhhcccccccccccccccCccc
Q 037275 415 -LGNLTLLTNLALSSNDLQGSIPPSLGNC--------KNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLP 485 (992)
Q Consensus 415 -~~~l~~L~~L~L~~N~l~~~~~~~~~~l--------~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~ 485 (992)
+..+++|+.|+|++|+|+ .+|..+... ++|+.| +|++|+++ .+|
T Consensus 692 ~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L-------------------------~Ls~N~L~-~lp 744 (876)
T 4ecn_A 692 LFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTI-------------------------DLRFNKLT-SLS 744 (876)
T ss_dssp HHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEE-------------------------ECCSSCCC-CCC
T ss_pred HHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEE-------------------------ECCCCCCc-cch
Confidence 458899999999999999 566544332 266666 55555565 677
Q ss_pred cccc--CCCCccEEeeecccccccCCcccccccccceeeccC------CcccccCCccccccCCCCEEECCCcccCCCCh
Q 037275 486 LEVG--NLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQG------NSFSGSIPSSLSSLKSIKELDMSSNNLSGQIP 557 (992)
Q Consensus 486 ~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 557 (992)
..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|..|.++++|+.|+|++|+| +.+|
T Consensus 745 ~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip 822 (876)
T 4ecn_A 745 DDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVD 822 (876)
T ss_dssp GGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCC
T ss_pred HHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccC
Confidence 7776 89999999999999997 788999999999999976 888999999999999999999999999 5888
Q ss_pred hhhhcCCCcceEecCCCcCcccCCCCC-ccCCcccccccCCCCcC--CCCC
Q 037275 558 EYLENLSFLEYLNLSYNHFEGEVPTKG-VFSNKTGISLSGNGKVC--GGLD 605 (992)
Q Consensus 558 ~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~~~~~~~~l~~N~~~C--~~~~ 605 (992)
..+. ++|+.|||++|++....+... .........+.+|++.| +|+.
T Consensus 823 ~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I~gC~~ 871 (876)
T 4ecn_A 823 EKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDIRGCDA 871 (876)
T ss_dssp SCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEEESCGG
T ss_pred Hhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccccCCCCC
Confidence 8765 699999999999986544321 11223455667776655 6653
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3e-46 Score=454.01 Aligned_cols=508 Identities=19% Similarity=0.172 Sum_probs=397.8
Q ss_pred CCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCC
Q 037275 83 DNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGH 162 (992)
Q Consensus 83 ~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~ 162 (992)
+.+++ .+|..+. +.+++|||++|+|++..|..|+++++|++|||++|+++ .+|+..+.++++|++|+|++|++++.
T Consensus 40 ~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l~~l 115 (635)
T 4g8a_A 40 ELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSL 115 (635)
T ss_dssp TSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcCCCC
Confidence 33444 6676553 47999999999999656678999999999999999998 78887777999999999999999977
Q ss_pred CCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccc-cCccccccCCCcEEeccCCccCCCCCccccc
Q 037275 163 FPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGI-VPPSIFNISSLENVFLPTNRFNGSLPLDIGV 241 (992)
Q Consensus 163 ~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 241 (992)
.+..|.++++|++|++++|++.+..+..|+++++|++|+|++|++++. .|..+..+++|++|++++|++++..+. .+.
T Consensus 116 ~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~l~ 194 (635)
T 4g8a_A 116 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT-DLR 194 (635)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG-GGH
T ss_pred CHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc-ccc
Confidence 677899999999999999999877777899999999999999999853 578889999999999999999854443 333
Q ss_pred cccccc----hhhccccccCCCCchhhhccccCceeeeccccccc-cccccccccCccceEecCCCCCCC------CCCC
Q 037275 242 SLPKLL----GFIVAENNFAGSIPESLSNASNLVELTLFDNQFRG-KVSIYFRSLKNLEWLNLGSNNLGT------GEAN 310 (992)
Q Consensus 242 ~~~~L~----~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~------~~~~ 310 (992)
.+.++. .+.++.|.+....+..+ ....+..+++.+|.... ..+..+..+..++...+..+.... ....
T Consensus 195 ~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~ 273 (635)
T 4g8a_A 195 VLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKS 273 (635)
T ss_dssp HHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTT
T ss_pred chhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccc
Confidence 344333 46678888886555544 44567888998886652 334456666666665554332211 1111
Q ss_pred Cchh---------------------hhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccC
Q 037275 311 DLDF---------------------LTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRN 369 (992)
Q Consensus 311 ~~~~---------------------~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~ 369 (992)
.+.. ...+..+.+++.+.+.++.+....+ +.. ...++.|++.+|.+.+..+. .
T Consensus 274 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~-~~~L~~L~l~~~~~~~~~~~---~ 347 (635)
T 4g8a_A 274 ALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKD--FSY-NFGWQHLELVNCKFGQFPTL---K 347 (635)
T ss_dssp TTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGG--GGS-CCCCSEEEEESCEESSCCCC---B
T ss_pred ccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccc--ccc-chhhhhhhcccccccCcCcc---c
Confidence 1110 1112333445555555555543322 111 23477788888887765443 4
Q ss_pred CCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccc--cCCCCCCCccccCceeccCCcccCCCCCCccccccccc
Q 037275 370 LVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAG--GIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIE 447 (992)
Q Consensus 370 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 447 (992)
+..|+.++++.|.+... ..+..+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+.. .+..+..+++|+.
T Consensus 348 l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~ 424 (635)
T 4g8a_A 348 LKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEH 424 (635)
T ss_dssp CTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCE
T ss_pred chhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccc
Confidence 56778888888877632 334568899999999998863 345556677889999999999884 5667889999999
Q ss_pred cccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccc-cccCCcccccccccceeeccCC
Q 037275 448 LHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRF-SGEIPVTLSACTSLQQLYLQGN 526 (992)
Q Consensus 448 L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~L~~N 526 (992)
+++.+|......+...+.....+..+++++|.+++..+..+..++.|++|+|++|.+ .+..|..|..+++|++|+|++|
T Consensus 425 l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N 504 (635)
T 4g8a_A 425 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 504 (635)
T ss_dssp EECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred hhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCC
Confidence 999999998888888888888889999999999999999999999999999999985 4468889999999999999999
Q ss_pred cccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCC-Ccc-CCcccccccCCCCcCCCC
Q 037275 527 SFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTK-GVF-SNKTGISLSGNGKVCGGL 604 (992)
Q Consensus 527 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~-~~~~~~~l~~N~~~C~~~ 604 (992)
+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++.+|.. ..+ +.++.+++.+|||.|+|.
T Consensus 505 ~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 505 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred ccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999999999999999999999999999999999999999999999988763 333 678999999999999985
Q ss_pred C
Q 037275 605 D 605 (992)
Q Consensus 605 ~ 605 (992)
.
T Consensus 585 ~ 585 (635)
T 4g8a_A 585 H 585 (635)
T ss_dssp G
T ss_pred c
Confidence 3
No 37
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-46 Score=416.54 Aligned_cols=284 Identities=23% Similarity=0.282 Sum_probs=205.7
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecc-cccCcce
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSI-DFKGVDF 755 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~~~ 755 (992)
++|++.++||+|+||+||+|++..+|+.||||+++.... ...+.+.+|+++|++++|||||++++++... .+.+...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 579999999999999999999999999999999964432 2345688999999999999999999987643 2445678
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.|+|||||+ |+|.+++.... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEeCCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecc
Confidence 899999995 68999997543 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
+|+.+...... ........+||+.|||||++.+. .++.++||||+||++|||++|++||.+....+ .+......
T Consensus 204 la~~~~~~~~~----~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~ 278 (398)
T 4b99_A 204 MARGLCTSPAE----HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMV 278 (398)
T ss_dssp TCBCC-----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHH
T ss_pred eeeecccCccc----cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHh
Confidence 99876432211 12233456899999999998875 56899999999999999999999998743221 11111111
Q ss_pred h--CChhHHHHHHhhHhHhhhccCCCCCCccc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 A--LPDKVMEIVDSVLLLEVQASNSRSCGDER-LRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
. .+..............+........+... ........++.+++.+||+.||++||||+|+++
T Consensus 279 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 279 LGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 1 01110000000000000000000000000 000012346789999999999999999999975
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.1e-45 Score=434.53 Aligned_cols=462 Identities=17% Similarity=0.154 Sum_probs=307.4
Q ss_pred EEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccc
Q 037275 53 TKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRN 132 (992)
Q Consensus 53 ~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n 132 (992)
+.+|+++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+.+++|++|++++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 78999999996 4887665 89999999999999777789999999999999999999777899999999999999999
Q ss_pred cccccCChhhcccccccccccccccccCC-CCCCccccccccceEEecCCcccCCcCCccCCCCcc--cEEeccCccc--
Q 037275 133 NLVGEIPAELGYNWLKLENLTIADNHLTG-HFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNL--ILLNLGENRF-- 207 (992)
Q Consensus 133 ~l~~~~p~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L--~~L~L~~n~l-- 207 (992)
+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+.+. .+..+++| +.|++++|++
T Consensus 111 ~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 111 RLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp CCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred cCC-ccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 998 78877 68999999999999996 3468899999999999999998653 45555566 9999999999
Q ss_pred ccccCccccccC-CCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeecccc-----cc
Q 037275 208 SGIVPPSIFNIS-SLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQ-----FR 281 (992)
Q Consensus 208 ~~~~p~~l~~l~-~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~-----l~ 281 (992)
++..|..+..+. ..-.++++.|.+.+.++... +..+++|+.|++++|+ +.
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~------------------------~~~l~~L~~L~l~~n~~~~~~l~ 239 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMS------------------------VNALGHLQLSNIKLNDENCQRLM 239 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEE------------------------ESSEEEEEEEEEECCSTTHHHHH
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhc------------------------ccccceEEEecccccccccchHH
Confidence 777888887765 12255677777765544433 3445555556665553 11
Q ss_pred ccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCccc-----ccccccceeEEeeC
Q 037275 282 GKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSI-----ANLSSTMTDIVIAG 356 (992)
Q Consensus 282 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~-----~~l~~~L~~L~l~~ 356 (992)
+ ....|..+++|+.|+++++.++... +.........++|++|++++|.+.+.+|..+ ..+ ..|..+++..
T Consensus 240 ~-~~~~l~~l~~L~~L~L~~~~l~~~~---~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L-~~L~~~~~~~ 314 (562)
T 3a79_B 240 T-FLSELTRGPTLLNVTLQHIETTWKC---SVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETAL-KSLMIEHVKN 314 (562)
T ss_dssp H-HHHHHHSCSSCEEEEEEEEEECHHH---HHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSC-CEEEEEEEEE
T ss_pred H-HHHHHhccCcceEEEecCCcCcHHH---HHHHHHhhhcccccEEEEeccEeeccccchhhhcccccc-hheehhhccc
Confidence 1 1123455556666665555443210 1111111122355555555555555555444 111 1233333333
Q ss_pred CccccccC-CCccC---CCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCccc
Q 037275 357 NQISGIIP-TGIRN---LVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQ 432 (992)
Q Consensus 357 n~i~~~~~-~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 432 (992)
|.+ .+| ..+.. ..+|++|++++|.+.... ....+++|++|++++|++++..|..+.++++|+.|++++|+++
T Consensus 315 ~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 390 (562)
T 3a79_B 315 QVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390 (562)
T ss_dssp CCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCC
T ss_pred cee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcC
Confidence 333 111 11111 134555555555543211 1134555555555555555545555555555555555555555
Q ss_pred CCC--CCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccc-cccCCCCccEEeeecccccccCC
Q 037275 433 GSI--PPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPL-EVGNLKNLVYFNISVNRFSGEIP 509 (992)
Q Consensus 433 ~~~--~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~ 509 (992)
+.. |..|..+++|++| ++++|++++.+|. .+..+++|++|+|++|++++..|
T Consensus 391 ~~~~~~~~~~~l~~L~~L-------------------------~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 391 NFFKVALMTKNMSSLETL-------------------------DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445 (562)
T ss_dssp BTTHHHHTTTTCTTCCEE-------------------------ECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG
T ss_pred CcccchhhhcCCCCCCEE-------------------------ECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchh
Confidence 321 2334445555444 6666666653443 47788899999999999887666
Q ss_pred cccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCCc
Q 037275 510 VTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGV 585 (992)
Q Consensus 510 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 585 (992)
..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|++|++++|+|.|.|+..+.
T Consensus 446 ~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 446 RCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp SSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHH
T ss_pred hhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHH
Confidence 6554 68899999999988 6777777889999999999999843333488889999999999999988876444
No 39
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-46 Score=439.40 Aligned_cols=447 Identities=20% Similarity=0.247 Sum_probs=332.6
Q ss_pred CeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeec
Q 037275 50 QRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNA 129 (992)
Q Consensus 50 ~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l 129 (992)
.+++.|||++|.+.+..|..++.+++|++|+|++|++++..|..|+.+++|++|+|++|+++ .+|.. .+++|++|++
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 57899999999998777788999999999999999999877999999999999999999999 78877 8999999999
Q ss_pred ccccccc-cCChhhcccccccccccccccccCCCCCCcccccccc--ceEEecCCcc--cCCcCCccCCCC-cccEEecc
Q 037275 130 RRNNLVG-EIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTL--ERINVLGNGL--WGRIPNNLGNLR-NLILLNLG 203 (992)
Q Consensus 130 ~~n~l~~-~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~l~~n~l--~~~~~~~l~~l~-~L~~L~L~ 203 (992)
++|++++ .+|..+. ++++|++|++++|.+++ ..+..+++| ++|++++|.+ .+..|..+..+. +...++++
T Consensus 98 ~~N~l~~~~~p~~~~-~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 173 (520)
T 2z7x_B 98 SFNAFDALPICKEFG-NMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFP 173 (520)
T ss_dssp CSSCCSSCCCCGGGG-GCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECC
T ss_pred cCCccccccchhhhc-cCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEec
Confidence 9999996 4677765 89999999999999986 567888888 9999999999 888898888876 45577889
Q ss_pred CcccccccCc-cccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccc
Q 037275 204 ENRFSGIVPP-SIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRG 282 (992)
Q Consensus 204 ~n~l~~~~p~-~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 282 (992)
+|++.+.++. .+..+++|+.|++++|.-..... .+.+.+| .++.+++|+.|++++|.+++
T Consensus 174 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~------------------~~~~~~~-~l~~l~~L~~L~l~~~~l~~ 234 (520)
T 2z7x_B 174 TNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS------------------YFLSILA-KLQTNPKLSNLTLNNIETTW 234 (520)
T ss_dssp SSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTH------------------HHHHHHH-GGGGCTTCCEEEEEEEEEEH
T ss_pred cCcchhhhhhhhhhcccceeeccccccccccccc------------------eeecchh-hhccccchhhccccccccCH
Confidence 9998876554 67789999999999987110000 0111222 45555666666666665553
Q ss_pred ccccccc---ccCccceEecCCCCCC-CCCCCCchhhhhccCCCcceEeecCCCcCCCcCC-ccccccc--ccceeEEee
Q 037275 283 KVSIYFR---SLKNLEWLNLGSNNLG-TGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLP-HSIANLS--STMTDIVIA 355 (992)
Q Consensus 283 ~~~~~~~---~l~~L~~L~L~~N~l~-~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~-~~~~~l~--~~L~~L~l~ 355 (992)
.....+. ..++|++|++++|+++ .++...+.. ....+++|+.+++++|.+ .+| ..+..+. .+++.|+++
T Consensus 235 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~--~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 235 NSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDY--SGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp HHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCC--CSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred HHHHHHHHHhhhCcccEEEeecccccCccccchhhc--ccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 3222111 1345666666666655 333221100 014555666666666666 333 3333321 237777777
Q ss_pred CCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccc--cCCCCCCCccccCceeccCCcccC
Q 037275 356 GNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAG--GIPTSLGNLTLLTNLALSSNDLQG 433 (992)
Q Consensus 356 ~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~ 433 (992)
+|.+.... .+..+++|++|++++|++++..|..+..+++|+.|+|++|++++ .+|..+..+++|++|++++|++++
T Consensus 311 ~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 388 (520)
T 2z7x_B 311 GTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388 (520)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBC
T ss_pred CCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCc
Confidence 77765432 12577788888888888887788888888888888888888875 445667788888888888888886
Q ss_pred CCCC-CccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCccc
Q 037275 434 SIPP-SLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTL 512 (992)
Q Consensus 434 ~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 512 (992)
.+|. .+..+++|++|++++ |++++..|..+. ++|++|+|++|+++ .+|..+
T Consensus 389 ~l~~~~~~~l~~L~~L~Ls~-------------------------N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 389 DEKKGDCSWTKSLLSLNMSS-------------------------NILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp CGGGCSCCCCTTCCEEECCS-------------------------SCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGG
T ss_pred ccccchhccCccCCEEECcC-------------------------CCCCcchhhhhc--ccCCEEECCCCccc-ccchhh
Confidence 4444 467777777775555 445445555443 79999999999999 788878
Q ss_pred ccccccceeeccCCcccccCCcc-ccccCCCCEEECCCcccCCCCh
Q 037275 513 SACTSLQQLYLQGNSFSGSIPSS-LSSLKSIKELDMSSNNLSGQIP 557 (992)
Q Consensus 513 ~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p 557 (992)
..+++|++|+|++|+|++ +|.. |..+++|++|+|++|++++..+
T Consensus 441 ~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 441 VKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 899999999999999995 5554 9999999999999999997544
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.8e-45 Score=402.97 Aligned_cols=210 Identities=25% Similarity=0.350 Sum_probs=172.2
Q ss_pred HHhcCCCCCCccccccceEEEEeEEC---CCCeEEEEEEeeccCCCchhHHHHHHHHHHhc-cCCcceeEEEEeeccccc
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLG---ENGMMVAVKVINLKQKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFK 751 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 751 (992)
...++|++.++||+|+||+||+|+++ .+++.||+|++... ....++.+|+++++.+ +||||+++++++ .
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~-----~ 90 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCF-----R 90 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEE-----E
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEE-----E
Confidence 44678999999999999999999874 46789999998533 3456788999999998 699999999985 4
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC-CcEE
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD-LVAH 830 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~k 830 (992)
..++.++||||+++|+|.+++. .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+|
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN---------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEE
T ss_pred ECCEEEEEEeCCCcccHHHHHc---------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEE
Confidence 4567899999999999999984 388999999999999999999999 99999999999999877 7999
Q ss_pred EeecccceecCCCCCCCC--------------------cccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHH
Q 037275 831 LGDFGLAKFLSSSPLDTA--------------------VETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLL 889 (992)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ 889 (992)
|+|||+|+.......... ..........+||+.|||||++.+. .|+.++||||+||++|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 999999987654321100 0011122345799999999998775 5899999999999999
Q ss_pred HHHhCCCCCCCCccC
Q 037275 890 EMFTRRRPTDGMFNQ 904 (992)
Q Consensus 890 elltg~~pf~~~~~~ 904 (992)
||++|+.||....++
T Consensus 239 ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 239 SLLSGRYPFYKASDD 253 (361)
T ss_dssp HHHHTCSSSSCCSSH
T ss_pred HHHHCCCCCCCCCCH
Confidence 999999999764443
No 41
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.1e-43 Score=411.32 Aligned_cols=250 Identities=24% Similarity=0.296 Sum_probs=198.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHH---HHHHHhccCCcceeEEEEeeccccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAE---CQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E---~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
.++|++.++||+|+||+||+|+++.+|+.||||+++.. .........+| +.+++.++|||||++++++ .
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f-----~ 262 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----H 262 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE-----E
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE-----E
Confidence 46899999999999999999999999999999999643 12223333444 5666777999999999984 4
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEE
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHL 831 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 831 (992)
+.+.+|+|||||+||+|.+++.+.. .+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||
T Consensus 263 ~~~~lylVmEy~~GGdL~~~l~~~~------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 263 TPDKLSFILDLMNGGDLHYHLSQHG------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEE
T ss_pred ECCEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEe
Confidence 5677899999999999999998643 589999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHE 910 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~ 910 (992)
+|||+|+.+.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|++||.+..... ..
T Consensus 334 ~DFGlA~~~~~~~----------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~- 400 (689)
T 3v5w_A 334 SDLGLACDFSKKK----------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KH- 400 (689)
T ss_dssp CCCTTCEECSSCC----------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HH-
T ss_pred cccceeeecCCCC----------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HH-
Confidence 9999998765321 234579999999999864 579999999999999999999999997632221 11
Q ss_pred HHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 037275 911 FARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERME-----MRDVVA 977 (992)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 977 (992)
.+.......... .+ .....++.+++.+||+.||++|++ ++||++
T Consensus 401 -----------~i~~~i~~~~~~------~p------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 401 -----------EIDRMTLTMAVE------LP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -----------HHHHHHHHCCCC------CC------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -----------HHHHhhcCCCCC------CC------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 111111111100 00 011345789999999999999998 677754
No 42
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.6e-43 Score=415.74 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=206.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|+++.+|+.||+|++........+.+.+|+.+|+.++|||||++++++ .+...++
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-----~~~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE-----ECSSEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEE
Confidence 46899999999999999999999999999999999765555567789999999999999999999995 4566789
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC--CcEEEeecc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD--LVAHLGDFG 835 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg 835 (992)
+|||||++|+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 231 iv~E~~~gg~L~~~i~~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTS-----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEeecCCCcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecc
Confidence 99999999999999975432 489999999999999999999999 99999999999999854 899999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
+|+.+.... .....+||+.|||||++.+..|+.++||||+||++|||++|++||.+....
T Consensus 303 ~a~~~~~~~---------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~----------- 362 (573)
T 3uto_A 303 LTAHLDPKQ---------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD----------- 362 (573)
T ss_dssp SCEECCTTS---------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----------
T ss_pred ceeEccCCC---------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----------
Confidence 999875421 123357999999999999999999999999999999999999999863221
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.+.......+.. .. ........++.+++.+||+.||++|||+.|+++
T Consensus 363 ------~~~~~i~~~~~~~------~~--~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 363 ------ETLRNVKSCDWNM------DD--SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ------HHHHHHHTTCCCC------CS--GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ------HHHHHHHhCCCCC------Cc--ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111111111100 00 000112345789999999999999999999986
No 43
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.3e-43 Score=385.04 Aligned_cols=294 Identities=28% Similarity=0.457 Sum_probs=258.7
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCCCCCcCCCCCCc--eEeeEEcCCC--CeEEEeeccccccCC--ccCCCCCCCCcC
Q 037275 3 VPSNETDRLALLAIGSQLEDDPLGVTSSWNNSTNLCQ--WTGVTCGHRH--QRVTKLDLSNRTIGG--TLSPYVGNLSFL 76 (992)
Q Consensus 3 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~ldl~~~~l~~--~l~~~l~~l~~L 76 (992)
+.|.++|++||++||+++. ||. .+++|+.+++||. |.||+|+..+ ++|+.|||+++.+.+ .+|+.++.+++|
T Consensus 1 ~~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDLG-NPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CCSCHHHHHHHHHHHHHTT-CCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCCHHHHHHHHHHHHhcC-Ccc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 4699999999999999984 665 7899988899998 9999998655 799999999999999 899999999999
Q ss_pred CeeeccC-CCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccccccccccccc
Q 037275 77 RYLNLAD-NNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIA 155 (992)
Q Consensus 77 ~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~ 155 (992)
++|+|++ |.+.+.+|..|+.+++|++|+|++|++++.+|..++.+++|++|++++|++++.+|..+. .+++|++|+|+
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS-SLPNLVGITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG-GCTTCCEEECC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHh-cCCCCCeEECc
Confidence 9999995 999999999999999999999999999999999999999999999999999988998876 79999999999
Q ss_pred ccccCCCCCCcccccc-ccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCC
Q 037275 156 DNHLTGHFPASIGNLS-TLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGS 234 (992)
Q Consensus 156 ~n~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 234 (992)
+|.+++.+|..++.++ +|++|++++|.+.+.+|..+..+. |+.|+|++|++++..|..+..+++|++|++++|++++.
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee
Confidence 9999999999999998 999999999999989999999987 99999999999998999999999999999999999866
Q ss_pred CCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCC
Q 037275 235 LPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNN 303 (992)
Q Consensus 235 ~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 303 (992)
+|. +..+++|++|++++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 237 ~~~--~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 237 LGK--VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGG--CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cCc--ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 554 345667777777777777677777777777777777777777666654 566666666666665
No 44
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.1e-42 Score=410.59 Aligned_cols=444 Identities=19% Similarity=0.211 Sum_probs=338.3
Q ss_pred CeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeec
Q 037275 50 QRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNA 129 (992)
Q Consensus 50 ~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l 129 (992)
..++.|||++|.+.+..+..++.+++|++|+|++|++++..|+.|..+++|++|+|++|+++ .+|.. .+++|++|++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 46899999999998777789999999999999999999878999999999999999999999 78877 8999999999
Q ss_pred ccccccc-cCChhhcccccccccccccccccCCCCCCcccccccc--ceEEecCCcc--cCCcCCccCCCC--cccEEec
Q 037275 130 RRNNLVG-EIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTL--ERINVLGNGL--WGRIPNNLGNLR--NLILLNL 202 (992)
Q Consensus 130 ~~n~l~~-~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~l~~n~l--~~~~~~~l~~l~--~L~~L~L 202 (992)
++|++++ .+|..+. ++++|++|++++|.+++ ..+..+++| ++|++++|.+ .+..|..|..+. .| .+++
T Consensus 129 s~N~l~~l~~p~~~~-~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l 203 (562)
T 3a79_B 129 SFNDFDVLPVCKEFG-NLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVF 203 (562)
T ss_dssp CSSCCSBCCCCGGGG-GCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEE
T ss_pred CCCCccccCchHhhc-ccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEe
Confidence 9999985 3445554 89999999999999986 356666666 9999999999 888888888765 33 6688
Q ss_pred cCcccccccCc-cccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeecccccc
Q 037275 203 GENRFSGIVPP-SIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFR 281 (992)
Q Consensus 203 ~~n~l~~~~p~-~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 281 (992)
++|.+.+.++. .+..+++|+.|++++|+..-. .+. .....+..+++|+.|+++++.+.
T Consensus 204 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~--------------------~l~-~~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 204 HPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ--------------------RLM-TFLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH--------------------HHH-HHHHHHHSCSSCEEEEEEEEEEC
T ss_pred cCccchhhhhhhcccccceEEEecccccccccc--------------------hHH-HHHHHHhccCcceEEEecCCcCc
Confidence 99998876654 466789999999999852200 000 11224555566666666665554
Q ss_pred cccccc---ccccCccceEecCCCCCC-CCCCCCchhhhhccCCCcceEeecCCCcCCCcCC-cccccc--cccceeEEe
Q 037275 282 GKVSIY---FRSLKNLEWLNLGSNNLG-TGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLP-HSIANL--SSTMTDIVI 354 (992)
Q Consensus 282 ~~~~~~---~~~l~~L~~L~L~~N~l~-~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~-~~~~~l--~~~L~~L~l 354 (992)
+..... .....+|++|++++|+++ .++...+.. ...+++.|+.++++.|.+ .+| ..+..+ ..++++|++
T Consensus 263 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~--~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l 338 (562)
T 3a79_B 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTY--SETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSI 338 (562)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCC--CSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEE
T ss_pred HHHHHHHHHhhhcccccEEEEeccEeeccccchhhhc--ccccchheehhhccccee--ecChhhhhhhhccCcceEEEc
Confidence 321111 112236667777776665 333322111 124556666666666665 333 222222 124888899
Q ss_pred eCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCcccccc--CCCCCCCccccCceeccCCccc
Q 037275 355 AGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGG--IPTSLGNLTLLTNLALSSNDLQ 432 (992)
Q Consensus 355 ~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~ 432 (992)
++|.+.... ....+++|++|++++|++++..|..+..+++|+.|+|++|++++. .|..|.++++|+.|++++|+++
T Consensus 339 ~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~ 416 (562)
T 3a79_B 339 SDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416 (562)
T ss_dssp ESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCB
T ss_pred cCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCC
Confidence 999876432 126889999999999999988999999999999999999999963 3567999999999999999999
Q ss_pred CCCCC-CccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcc
Q 037275 433 GSIPP-SLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVT 511 (992)
Q Consensus 433 ~~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 511 (992)
+.+|. .+..+++|++|++++|+++ +..|..+. ++|++|+|++|+++ .+|..
T Consensus 417 ~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~~~~~l~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 417 SHAYDRTCAWAESILVLNLSSNMLT-------------------------GSVFRCLP--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp SCCSSCCCCCCTTCCEEECCSSCCC-------------------------GGGGSSCC--TTCSEEECCSSCCC-CCCTT
T ss_pred CccChhhhcCcccCCEEECCCCCCC-------------------------cchhhhhc--CcCCEEECCCCcCc-ccChh
Confidence 84554 5888899998866555544 34444443 69999999999999 67777
Q ss_pred cccccccceeeccCCcccccCCcc-ccccCCCCEEECCCcccCCCCh
Q 037275 512 LSACTSLQQLYLQGNSFSGSIPSS-LSSLKSIKELDMSSNNLSGQIP 557 (992)
Q Consensus 512 ~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p 557 (992)
+..+++|++|+|++|+|++ +|.. |..+++|+.|+|++|.+.+..+
T Consensus 469 ~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 469 VTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred hcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 7799999999999999995 5555 9999999999999999997555
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.5e-41 Score=394.47 Aligned_cols=403 Identities=18% Similarity=0.205 Sum_probs=223.3
Q ss_pred CCCCCceEe--eEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCC
Q 037275 34 STNLCQWTG--VTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFS 111 (992)
Q Consensus 34 ~~~~c~w~g--v~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 111 (992)
+...|.|.+ |.|+.. ++ ..+|. + .++|++|||++|++++..|..|+.+++|++|+|++|.+.
T Consensus 4 ~~~~c~~~~~~~~c~~~------------~l-~~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~ 67 (455)
T 3v47_A 4 GTSECSVIGYNAICINR------------GL-HQVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPG 67 (455)
T ss_dssp ---CCEEETTEEECCSS------------CC-SSCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTT
T ss_pred ccceeEEEccccCcCCC------------Cc-ccCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCccc
Confidence 345677776 666432 33 34554 2 267788888888887666777777788888888777776
Q ss_pred CCC-CcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCc
Q 037275 112 GKI-PTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNN 190 (992)
Q Consensus 112 ~~~-p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~ 190 (992)
+.+ |..|+.+++|++|++++|+++ +..|..|+++++|++|++++|.+.+..|..
T Consensus 68 ~~i~~~~~~~l~~L~~L~Ls~n~l~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 122 (455)
T 3v47_A 68 LVIRNNTFRGLSSLIILKLDYNQFL-------------------------QLETGAFNGLANLEVLTLTQCNLDGAVLSG 122 (455)
T ss_dssp CEECTTTTTTCTTCCEEECTTCTTC-------------------------EECTTTTTTCTTCCEEECTTSCCBTHHHHS
T ss_pred ceECcccccccccCCEEeCCCCccC-------------------------ccChhhccCcccCCEEeCCCCCCCccccCc
Confidence 444 344555555555555555554 333444444555555555555554333322
Q ss_pred --cCCCCcccEEeccCcccccccCcc-ccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhcc
Q 037275 191 --LGNLRNLILLNLGENRFSGIVPPS-IFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNA 267 (992)
Q Consensus 191 --l~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l 267 (992)
|.++++|++|+|++|++++..|.. +.++++|++|++++|++.+..| ..+..+
T Consensus 123 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------------------------~~l~~l 177 (455)
T 3v47_A 123 NFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICE-------------------------EDLLNF 177 (455)
T ss_dssp STTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCT-------------------------TTSGGG
T ss_pred ccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccCh-------------------------hhhhcc
Confidence 455555555555555555443433 4444444444444444432211 111111
Q ss_pred --ccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccc
Q 037275 268 --SNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANL 345 (992)
Q Consensus 268 --~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l 345 (992)
.+|+.|++++|.+.+..+..+. ......+..+++|+.|++++|++.+..|..+...
T Consensus 178 ~~~~L~~L~l~~n~l~~~~~~~~~----------------------~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~ 235 (455)
T 3v47_A 178 QGKHFTLLRLSSITLQDMNEYWLG----------------------WEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDA 235 (455)
T ss_dssp TTCEEEEEECTTCBCTTCSTTCTT----------------------HHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHH
T ss_pred ccccccccccccCcccccchhhcc----------------------ccccccccccceeeeEecCCCcccccchhhhhcc
Confidence 2333333333333322211110 0000111122333333333333333333222221
Q ss_pred cccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCC--ccccCc
Q 037275 346 SSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGN--LTLLTN 423 (992)
Q Consensus 346 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~ 423 (992)
. ..++|+.|++++|.+.+.. +..+.+.+..+..+.. .++|+.
T Consensus 236 ~----------------------~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~ 279 (455)
T 3v47_A 236 I----------------------AGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKT 279 (455)
T ss_dssp T----------------------TTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCE
T ss_pred c----------------------cccceeeEeeccccccccc--------------cchhhhccCcccccccccccCceE
Confidence 0 0133444444444333210 0111111111122222 235556
Q ss_pred eeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeeccc
Q 037275 424 LALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNR 503 (992)
Q Consensus 424 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 503 (992)
|++++|.+++..|..|..+++|++|+++ +|.+++..|..|..+++|++|+|++|+
T Consensus 280 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls-------------------------~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 334 (455)
T 3v47_A 280 CDLSKSKIFALLKSVFSHFTDLEQLTLA-------------------------QNEINKIDDNAFWGLTHLLKLNLSQNF 334 (455)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECT-------------------------TSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEecCccccccchhhcccCCCCCEEECC-------------------------CCcccccChhHhcCcccCCEEECCCCc
Confidence 6666666665555556666666555333 333333445566677788888888888
Q ss_pred ccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCC
Q 037275 504 FSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTK 583 (992)
Q Consensus 504 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 583 (992)
+++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|++++|+|+|.+|..
T Consensus 335 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 335 LGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred cCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 88777888888999999999999999888999999999999999999999877778899999999999999999999865
Q ss_pred Cc
Q 037275 584 GV 585 (992)
Q Consensus 584 ~~ 585 (992)
..
T Consensus 415 ~~ 416 (455)
T 3v47_A 415 DY 416 (455)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.4e-42 Score=394.04 Aligned_cols=422 Identities=23% Similarity=0.279 Sum_probs=190.2
Q ss_pred CCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccccc
Q 037275 68 PYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWL 147 (992)
Q Consensus 68 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~ 147 (992)
|.-...++|++|++++|++ |.+|++|+.+++|++|++++|+++|.+|.+++.+++|+.++++.|.. .
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~------------~ 71 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD------------R 71 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH------------H
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc------------c
Confidence 3334567788888888888 58888888888888888888888888888888877776665555432 2
Q ss_pred ccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEecc
Q 037275 148 KLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLP 227 (992)
Q Consensus 148 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 227 (992)
++++|++++|.+++ +|.. .++|++|++++|.+.+ +|.. +++|++|++++|++++ +|.. .++|++|+++
T Consensus 72 ~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~ 139 (454)
T 1jl5_A 72 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVS 139 (454)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECC
T ss_pred CCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECc
Confidence 45566666666653 3332 2456666666666643 4432 2455666666666553 2221 1455555555
Q ss_pred CCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCC
Q 037275 228 TNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTG 307 (992)
Q Consensus 228 ~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 307 (992)
+|++++ + | .++++++|++|++++|++++. |.. ..+|++|++++|+++.+
T Consensus 140 ~n~l~~-l-------------------------p-~~~~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~l 188 (454)
T 1jl5_A 140 NNQLEK-L-------------------------P-ELQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLEEL 188 (454)
T ss_dssp SSCCSS-C-------------------------C-CCTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSSC
T ss_pred CCCCCC-C-------------------------c-ccCCCCCCCEEECCCCcCccc-CCC---cccccEEECcCCcCCcC
Confidence 555542 2 2 244444444444444444432 111 12455555555554443
Q ss_pred CCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCC
Q 037275 308 EANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTI 387 (992)
Q Consensus 308 ~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 387 (992)
+ .+..+++|+.|++++|++.+ +|.. ..+|++|++++|+++ .+| .+..+++|++|++++|++++ +
T Consensus 189 ~--------~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l 252 (454)
T 1jl5_A 189 P--------ELQNLPFLTAIYADNNSLKK-LPDL----PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-L 252 (454)
T ss_dssp C--------CCTTCTTCCEEECCSSCCSS-CCCC----CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-C
T ss_pred c--------cccCCCCCCEEECCCCcCCc-CCCC----cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-c
Confidence 2 13444455555555555543 2211 124666666666666 344 36777777777777777764 3
Q ss_pred CccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhc
Q 037275 388 PHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSIS 467 (992)
Q Consensus 388 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~ 467 (992)
|.. +++|+.|++++|++++ +|.. .++|+.|++++|++++ +|.. .++|+.|++++|++++ ++ ...
T Consensus 253 ~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~----~~~ 316 (454)
T 1jl5_A 253 PDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LC----DLP 316 (454)
T ss_dssp CSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-EC----CCC
T ss_pred ccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-cc----CCc
Confidence 432 3667777777777774 4433 2567777777777774 2211 1466666666666653 11 111
Q ss_pred ccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccc--cCCccccccCCCCEE
Q 037275 468 TLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSG--SIPSSLSSLKSIKEL 545 (992)
Q Consensus 468 ~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L 545 (992)
..++.|++++|++++ +|.. +++|++|++++|++++ +|. .+++|++|++++|++++ .+|..+..+
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L------ 382 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL------ 382 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE------
T ss_pred CcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh------
Confidence 234445555555553 3332 3566666666666663 343 34566666666666665 444444332
Q ss_pred ECCCcccCCCChhhhhcCCCcceEecCCCcCcc--cCCCCCccCCcccccccCCCCcC
Q 037275 546 DMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEG--EVPTKGVFSNKTGISLSGNGKVC 601 (992)
Q Consensus 546 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~~~~~~~~l~~N~~~C 601 (992)
+.|++.+.+|.. +++|++|++++|++++ .+| +.+..+.+.+|...|
T Consensus 383 --~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP-----~sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 383 --RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIP-----ESVEDLRMNSERVVD 430 (454)
T ss_dssp --ECCC----------------------------------------------------
T ss_pred --hhcccccccccc---cCcCCEEECCCCcCCccccch-----hhHhheeCcCcccCC
Confidence 234444444442 3788899999999887 333 235556666665544
No 47
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.2e-41 Score=370.33 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=206.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.++||+|+||+||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++.. ....+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-----CCEEE
Confidence 4689999999999999999999988999999999987766677889999999999999999999998643 45679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.+++... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 94 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEECCTTCBHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEECCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 999999999999999753 388999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALP 917 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~ 917 (992)
....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.....
T Consensus 164 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------------ 223 (297)
T 3fxz_A 164 AQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------------ 223 (297)
T ss_dssp EECCSTT--------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------------
T ss_pred eecCCcc--------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH------------
Confidence 8765422 12234569999999999999999999999999999999999999997532110
Q ss_pred hhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 918 DKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
............ ..........+.+++.+||+.||++|||++|+++
T Consensus 224 -----~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 224 -----ALYLIATNGTPE---------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -----HHHHHHHHCSCC---------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----HHHHHHhCCCCC---------CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000000000000 0001122345889999999999999999999986
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.9e-41 Score=393.60 Aligned_cols=397 Identities=17% Similarity=0.158 Sum_probs=256.1
Q ss_pred CCcCCCCCCceEeeEEcC-CCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccC-CccccCCCCCCEEEeec
Q 037275 30 SWNNSTNLCQWTGVTCGH-RHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEI-PHQIGRLVRLEALVLAN 107 (992)
Q Consensus 30 ~w~~~~~~c~w~gv~c~~-~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~ 107 (992)
.|....-.|.+.|++.-. ...+++.|||++|.+.+..|..++.+++|++|+|++|.+.+.+ |..|..+++|++|+|++
T Consensus 9 ~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 9 SVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp EEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred EEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 443333447776665422 3457999999999998888999999999999999999998666 56799999999999999
Q ss_pred ccCCCCCCcccccCCCCcEeecccccccccCChh-hcccccccccccccccccCCCCCCc-cccccccceEEecCCcccC
Q 037275 108 NSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAE-LGYNWLKLENLTIADNHLTGHFPAS-IGNLSTLERINVLGNGLWG 185 (992)
Q Consensus 108 n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~-~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~ 185 (992)
|++++..|..|+++++|++|++++|++++.+|.. .+..+++|++|+|++|.+++..|.. +.++++|++|++++|.+.+
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 9999888999999999999999999988654443 2234555666666666555544444 4555555555555555544
Q ss_pred CcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhh
Q 037275 186 RIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLS 265 (992)
Q Consensus 186 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~ 265 (992)
..|..+..+. ..+|+.|++++|.+.+..+..+. ......+.
T Consensus 169 ~~~~~l~~l~----------------------~~~L~~L~l~~n~l~~~~~~~~~-----------------~~~~~~~~ 209 (455)
T 3v47_A 169 ICEEDLLNFQ----------------------GKHFTLLRLSSITLQDMNEYWLG-----------------WEKCGNPF 209 (455)
T ss_dssp CCTTTSGGGT----------------------TCEEEEEECTTCBCTTCSTTCTT-----------------HHHHCCTT
T ss_pred cChhhhhccc----------------------cccccccccccCcccccchhhcc-----------------cccccccc
Confidence 4444444330 03445555555544421111100 00111233
Q ss_pred ccccCceeeecccccccccccccccc---CccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCccc
Q 037275 266 NASNLVELTLFDNQFRGKVSIYFRSL---KNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSI 342 (992)
Q Consensus 266 ~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~ 342 (992)
.+++|++|++++|++++..+..+..+ .+|+.|++++|.+..... ..+
T Consensus 210 ~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--------------------~~~---------- 259 (455)
T 3v47_A 210 KNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF--------------------GHT---------- 259 (455)
T ss_dssp TTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT--------------------TCC----------
T ss_pred ccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc--------------------chh----------
Confidence 45677777777777776666665544 566666666665432110 001
Q ss_pred ccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccC
Q 037275 343 ANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLT 422 (992)
Q Consensus 343 ~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 422 (992)
.+.+..+..+..+ ..++|+.|++++|++++..|..|..+++|+
T Consensus 260 ---------------~~~~~~~~~~~~~----------------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 302 (455)
T 3v47_A 260 ---------------NFKDPDNFTFKGL----------------------EASGVKTCDLSKSKIFALLKSVFSHFTDLE 302 (455)
T ss_dssp ---------------SSCCCCTTTTGGG----------------------TTSCCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred ---------------hhccCcccccccc----------------------cccCceEEEecCccccccchhhcccCCCCC
Confidence 1111111111111 123455555555555555555555555555
Q ss_pred ceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecc
Q 037275 423 NLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVN 502 (992)
Q Consensus 423 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 502 (992)
+|+|++|++++..|..|..+++|++|+++ +|.+++..|..|..+++|++|+|++|
T Consensus 303 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls-------------------------~N~l~~~~~~~~~~l~~L~~L~Ls~N 357 (455)
T 3v47_A 303 QLTLAQNEINKIDDNAFWGLTHLLKLNLS-------------------------QNFLGSIDSRMFENLDKLEVLDLSYN 357 (455)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECC-------------------------SSCCCEECGGGGTTCTTCCEEECCSS
T ss_pred EEECCCCcccccChhHhcCcccCCEEECC-------------------------CCccCCcChhHhcCcccCCEEECCCC
Confidence 55555555555555556566666555333 33333344566777888888888888
Q ss_pred cccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCCh
Q 037275 503 RFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIP 557 (992)
Q Consensus 503 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 557 (992)
++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..|
T Consensus 358 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 358 HIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 8888888889999999999999999997777778899999999999999998776
No 49
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=373.02 Aligned_cols=273 Identities=22% Similarity=0.371 Sum_probs=215.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.++||+|+||+||+|++..+++.||+|++........+.+.+|++++++++||||+++++++.+ ....+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-----DKRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-----CCeeE
Confidence 3578899999999999999999998999999999865555566789999999999999999999999653 45679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDS-----QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccc
Confidence 99999999999999986433 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCc------ccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 838 KFLSSSPLDTAV------ETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 838 ~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+........... ..........||+.|+|||++.+..++.++|||||||++|||++|..||..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~--- 232 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF--- 232 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS---
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH---
Confidence 876543321110 00111124579999999999999999999999999999999999999987643321111
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhc
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGR 989 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 989 (992)
........+... ...+ ...+.+++.+||+.||++|||++|+++.|+++++.+.+.
T Consensus 233 -----~~~~~~~~~~~~--------~~~~----------~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~ 287 (310)
T 3s95_A 233 -----GLNVRGFLDRYC--------PPNC----------PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH 287 (310)
T ss_dssp -----SBCHHHHHHHTC--------CTTC----------CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHC
T ss_pred -----hhhhhccccccC--------CCCC----------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCc
Confidence 001111111100 0111 234889999999999999999999999999998876543
No 50
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.2e-41 Score=371.96 Aligned_cols=288 Identities=32% Similarity=0.481 Sum_probs=224.0
Q ss_pred ccHHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecc
Q 037275 669 ISYAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSI 748 (992)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 748 (992)
+++.++...+++|++.+.||+|+||+||+|++. +++.||||++........+.+.+|+.+++.++||||+++++++.
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-- 105 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD-- 105 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC--
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc--
Confidence 334455667889999999999999999999975 78999999987666666788999999999999999999999964
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 828 (992)
.....++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 106 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 106 ---ERNEMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177 (321)
T ss_dssp ---CTTCCEEEEECCTTCBTGGGSSSSCCC--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCC
T ss_pred ---CCCeEEEEEEcCCCCcHHHHHhccCCC--ccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCC
Confidence 345669999999999999998754321 23589999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCC-cc
Q 037275 829 AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQG-LT 907 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~-~~ 907 (992)
+||+|||+++...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ..
T Consensus 178 ~kl~Dfg~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~ 251 (321)
T 2qkw_B 178 PKITDFGISKKGTELD------QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251 (321)
T ss_dssp EEECCCTTCEECSSSS------CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCC
T ss_pred EEEeeccccccccccc------ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHH
Confidence 9999999998654321 1112233468999999999988899999999999999999999999998653322 11
Q ss_pred HHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 908 LHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
...+...... ..... .............+....+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 252 ~~~~~~~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 252 LAEWAVESHN-----------NGQLE--QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp HHHHTHHHHT-----------TTCCC--SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHhhhccc-----------cccHH--HhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 2221111000 00000 000000111223566788999999999999999999999999999987643
No 51
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.5e-41 Score=371.40 Aligned_cols=285 Identities=23% Similarity=0.338 Sum_probs=215.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.++||+|+||+||+|++. ++.||||++.... .......+|+.++++++||||+++++++..... .....+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS-VDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCC-CCceEE
Confidence 458999999999999999999984 8999999996432 234456678999999999999999999865322 244579
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcC-------CCCeEeccCCCCCeeeCCCCcEE
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHC-------QPPVVHGDLKPSNVLLDQDLVAH 830 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-------~~~ivH~Dlkp~NIll~~~~~~k 830 (992)
+||||+++|+|.++++.. .+++..++.++.|++.||+|||+.. .++|+||||||+||+++.++.+|
T Consensus 99 lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN-------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred EEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 999999999999999753 3899999999999999999999751 23799999999999999999999
Q ss_pred EeecccceecCCCCCCCCcccCCCCCcccccccccccccccC-----CCcCcccchhhHHHHHHHHHhCCCCCCCCccCC
Q 037275 831 LGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-----GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQG 905 (992)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~ 905 (992)
|+|||+|+....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..+..
T Consensus 172 L~DFg~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 245 (322)
T 3soc_A 172 IADFGLALKFEAGKS------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY 245 (322)
T ss_dssp ECCCTTCEEECTTSC------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCC
T ss_pred EccCCcccccccccC------ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchh
Confidence 999999987754321 112233569999999999876 356778999999999999999999998755443
Q ss_pred ccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 906 LTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
...........+ ....+.+.... ...+..............++.+++.+||+.||++|||++||++.|+++.+.
T Consensus 246 ~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 246 MLPFEEEIGQHP-SLEDMQEVVVH-----KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCTTHHHHCSSC-CHHHHHHHHTT-----SCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccchhhhhccCC-chhhhhhhhhc-----ccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 222111111111 11111111111 111111122222334567799999999999999999999999999998764
No 52
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.7e-41 Score=375.31 Aligned_cols=289 Identities=33% Similarity=0.612 Sum_probs=226.7
Q ss_pred cCCCcccHHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEE
Q 037275 664 QQFPMISYAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKII 742 (992)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~ 742 (992)
.+...+++.++....++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+.++++++||||++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 34556889999999999999999999999999999865 78999999986443 22344789999999999999999999
Q ss_pred EEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCee
Q 037275 743 TICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVL 822 (992)
Q Consensus 743 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 822 (992)
+++.. ....++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++..++|+||||||+||+
T Consensus 94 ~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil 166 (326)
T 3uim_A 94 GFCMT-----PTERLLVYPYMANGSVASCLRERPES--QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL 166 (326)
T ss_dssp EEECC-----SSCCEEEEECCTTCBHHHHHHCCSTT--CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEE
T ss_pred EEEec-----CCceEEEEEeccCCCHHHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEE
Confidence 99643 44558999999999999999875432 345899999999999999999999986678999999999999
Q ss_pred eCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCC-
Q 037275 823 LDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGM- 901 (992)
Q Consensus 823 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~- 901 (992)
++.++.+||+|||+++...... ........||+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 239 (326)
T 3uim_A 167 LDEEFEAVVGDFGLAKLMDYKD-------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239 (326)
T ss_dssp ECTTCCEEECCCSSCEECCSSS-------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHH
T ss_pred ECCCCCEEeccCccccccCccc-------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccc
Confidence 9999999999999998765321 11223345899999999998889999999999999999999999999642
Q ss_pred --ccCCccHHHHHhhhCChh-HHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 902 --FNQGLTLHEFARTALPDK-VMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 902 --~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
.........+........ .....+ .........+....+.+++.+||+.||++|||++||++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 305 (326)
T 3uim_A 240 LANDDDVMLLDWVKGLLKEKKLEALVD--------------VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305 (326)
T ss_dssp HTTTSCSBHHHHHTTTTSSCCSTTSSC--------------TTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred cccccchhHHHHHHHHhhchhhhhhcC--------------hhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHH
Confidence 112222333332222111 000000 001112235667889999999999999999999999999
Q ss_pred HHH
Q 037275 979 LCR 981 (992)
Q Consensus 979 L~~ 981 (992)
|++
T Consensus 306 L~~ 308 (326)
T 3uim_A 306 LEG 308 (326)
T ss_dssp HHT
T ss_pred hcC
Confidence 975
No 53
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.1e-41 Score=368.86 Aligned_cols=281 Identities=22% Similarity=0.350 Sum_probs=210.2
Q ss_pred hcCCCCCCccccccceEEEEeE----ECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGN----LGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.+.||+|+||+||+|+ ...+++.||||++........+.+.+|+.++++++||||+++++++... +.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---HH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CC
Confidence 4588999999999999999998 4568899999999755555567889999999999999999999987532 23
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 157 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CceEEEEEeCCCCCHHHHHHhccc-----ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEcc
Confidence 446899999999999999986543 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||+++....... .........++..|+|||++.+..++.++|||||||++|||++|..||...... ......
T Consensus 158 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~ 229 (295)
T 3ugc_A 158 FGLTKVLPQDKE-----FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIG 229 (295)
T ss_dssp CCSCC------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHC
T ss_pred CcccccccCCcc-----eeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhc
Confidence 999987654321 111222345788899999999999999999999999999999999998652111 111111
Q ss_pred hhC-ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 914 TAL-PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 914 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
... .................... ......++.+++.+||+.||++|||++|+++.|+++++.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 230 NDKQGQMIVFHLIELLKNNGRLPR----------PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp TTCCTHHHHHHHHHHHHTTCCCCC----------CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred CccccchhHHHHHHHHhccCcCCC----------CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 111 11111111111111110000 11224568999999999999999999999999999988764
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.7e-41 Score=369.08 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=203.6
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
..++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++. ...
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~~~ 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-----TEK 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECC
Confidence 35689999999999999999999988999999999975432 23456889999999999999999999964 455
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DF 158 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVAHG------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADF 158 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECST
T ss_pred EEEEEEECCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeec
Confidence 6799999999999999997643 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcC-cccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEAS-MTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
|++...... .......||+.|+|||++.+..+. .++||||+||++|+|++|+.||.+...
T Consensus 159 G~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---------- 219 (328)
T 3fe3_A 159 GFSNEFTVG---------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------- 219 (328)
T ss_dssp TCCGGGSSS---------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH----------
T ss_pred cCceecCCC---------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH----------
Confidence 999765432 122345699999999999888765 799999999999999999999976321
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.+.......+.+.. + .....++.+++.+||+.||++|||++|+++
T Consensus 220 -------~~~~~~i~~~~~~~------p------~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 220 -------KELRERVLRGKYRI------P------FYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -------HHHHHHHHHCCCCC------C------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -------HHHHHHHHhCCCCC------C------CCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111111100 0 011345789999999999999999999975
No 55
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-40 Score=364.49 Aligned_cols=265 Identities=28% Similarity=0.398 Sum_probs=200.8
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
...++|++.+.||+|+||+||+|++ +++.||||++..... ...+.+.+|++++++++||||+++++++. ..
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~ 106 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT-----QP 106 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----ST
T ss_pred CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----EC
Confidence 3456899999999999999999988 588999999864432 23357889999999999999999999964 34
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCCeeeCCCCcEEE
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPP--VVHGDLKPSNVLLDQDLVAHL 831 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl 831 (992)
...++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL 180 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGA---REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKV 180 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTH---HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEE
T ss_pred CceEEEEecCCCCcHHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEE
Confidence 456999999999999999986542 23489999999999999999999999 8 999999999999999999999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 181 ~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~------- 245 (309)
T 3p86_A 181 CDFGLSRLKASTF--------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA------- 245 (309)
T ss_dssp CCCC-------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-------
T ss_pred CCCCCCccccccc--------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------
Confidence 9999997544321 1223456899999999999999999999999999999999999999753211
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhh
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLG 988 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 988 (992)
+............ .. ......++.+++.+||+.||++|||++|+++.|+++.+...+
T Consensus 246 ----------~~~~~~~~~~~~~----~~------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 246 ----------QVVAAVGFKCKRL----EI------PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp ----------HHHHHHHHSCCCC----CC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred ----------HHHHHHHhcCCCC----CC------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 0000000000000 00 011234588999999999999999999999999998876544
No 56
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.9e-40 Score=358.65 Aligned_cols=284 Identities=30% Similarity=0.471 Sum_probs=222.9
Q ss_pred CCCcccHHHHHHHhcCCCCC------CccccccceEEEEeEECCCCeEEEEEEeeccC----CCchhHHHHHHHHHHhcc
Q 037275 665 QFPMISYAELSKATNDFSSS------NMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ----KGASNGFVAECQALRNIR 734 (992)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~ 734 (992)
....+++.++..++++|... ++||+|+||+||+|+. +++.||||++.... ....+.+.+|+.++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 45678999999999998877 8999999999999997 58899999986432 233567899999999999
Q ss_pred CCcceeEEEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 037275 735 HRNLIKIITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHG 814 (992)
Q Consensus 735 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~ 814 (992)
||||+++++++.. ....++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ +|+||
T Consensus 89 h~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~ 157 (307)
T 2nru_A 89 HENLVELLGFSSD-----GDDLCLVYVYMPNGSLLDRLSCLDG---TPPLSWHMRCKIAQGAANGINFLHEN---HHIHR 157 (307)
T ss_dssp CTTBCCEEEEECS-----SSSCEEEEECCTTCBHHHHHHTGGG---CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCeEEEEEEEec-----CCceEEEEEecCCCcHHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecC
Confidence 9999999999643 4456999999999999999975432 24589999999999999999999999 99999
Q ss_pred cCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhC
Q 037275 815 DLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTR 894 (992)
Q Consensus 815 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg 894 (992)
||||+||+++.++.+||+|||.+........ ........||+.|+|||++.+ .++.++|||||||++|+|++|
T Consensus 158 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g 230 (307)
T 2nru_A 158 DIKSANILLDEAFTAKISDFGLARASEKFAQ------TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230 (307)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSCSS------CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHEEEcCCCcEEEeecccccccccccc------cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHC
Confidence 9999999999999999999999987653211 111233568999999998765 588999999999999999999
Q ss_pred CCCCCCCccCCccHHHHHhhh--CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 037275 895 RRPTDGMFNQGLTLHEFARTA--LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM 972 (992)
Q Consensus 895 ~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 972 (992)
+.||........ ...+.... ....+.+.+++.. ..........+.+++.+||+.||++|||+
T Consensus 231 ~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 294 (307)
T 2nru_A 231 LPAVDEHREPQL-LLDIKEEIEDEEKTIEDYIDKKM---------------NDADSTSVEAMYSVASQCLHEKKNKRPDI 294 (307)
T ss_dssp CCSBCTTBSSSB-TTHHHHHHHTTSCCHHHHSCSSC---------------SCCCHHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred CCCcccCcchHH-HHHHHHHhhhhhhhhhhhccccc---------------cccchHHHHHHHHHHHHHcCCCcccCcCH
Confidence 999987543321 11111110 1111122211100 11224456779999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 037275 973 RDVVAKLCRARD 984 (992)
Q Consensus 973 ~evl~~L~~~~~ 984 (992)
+||++.|+++.+
T Consensus 295 ~~l~~~L~~l~~ 306 (307)
T 2nru_A 295 KKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhc
Confidence 999999998754
No 57
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.4e-40 Score=364.15 Aligned_cols=263 Identities=22% Similarity=0.297 Sum_probs=211.7
Q ss_pred CCcccHHHHHHHhcC----------CCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccC
Q 037275 666 FPMISYAELSKATND----------FSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRH 735 (992)
Q Consensus 666 ~~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 735 (992)
.+.+++++++.+++. |+..++||+|+||.||+|++..+|+.||||++........+.+.+|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 356788888877764 6677899999999999999988999999999987666667789999999999999
Q ss_pred CcceeEEEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEecc
Q 037275 736 RNLIKIITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGD 815 (992)
Q Consensus 736 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 815 (992)
|||+++++++.. ....++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+|||
T Consensus 102 ~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~D 166 (321)
T 2c30_A 102 FNVVEMYKSYLV-----GEELWVLMEFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRD 166 (321)
T ss_dssp TTBCCEEEEEEE-----TTEEEEEECCCCSCBHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CCcceEEEEEEE-----CCEEEEEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCC
Confidence 999999998653 34679999999999999998643 489999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCC
Q 037275 816 LKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRR 895 (992)
Q Consensus 816 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 895 (992)
|||+||+++.++.+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 167 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~ 238 (321)
T 2c30_A 167 IKSDSILLTLDGRVKLSDFGFCAQISKDV--------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238 (321)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECCSSS--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred CCHHHEEECCCCcEEEeeeeeeeecccCc--------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999999998765321 1123456999999999999999999999999999999999999
Q ss_pred CCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 037275 896 RPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDV 975 (992)
Q Consensus 896 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 975 (992)
.||...... + ....... .. .... .........+.+++.+||+.||++|||++|+
T Consensus 239 ~pf~~~~~~-----~------------~~~~~~~-~~----~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 292 (321)
T 2c30_A 239 PPYFSDSPV-----Q------------AMKRLRD-SP----PPKL----KNSHKVSPVLRDFLERMLVRDPQERATAQEL 292 (321)
T ss_dssp CTTTTSCHH-----H------------HHHHHHH-SS----CCCC----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCCCCHH-----H------------HHHHHhc-CC----CCCc----CccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 999753211 0 0000000 00 0000 0011123458899999999999999999999
Q ss_pred HH
Q 037275 976 VA 977 (992)
Q Consensus 976 l~ 977 (992)
++
T Consensus 293 l~ 294 (321)
T 2c30_A 293 LD 294 (321)
T ss_dssp HT
T ss_pred hc
Confidence 86
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.6e-41 Score=370.34 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=196.4
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
..++|++.+.||+|+||+||+|++..+|+.||||++.... ......+.+|++++++++||||+++++++. ....
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~-----~~~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLE-----TANK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCE
Confidence 3568999999999999999999999899999999996443 234567899999999999999999999964 4456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG 153 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQD------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFG 153 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEecc
Confidence 799999999999999997543 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
+|....... ........||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+....
T Consensus 154 ~a~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~---------- 216 (347)
T 3zgw_A 154 LCAKPKGNK-------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM---------- 216 (347)
T ss_dssp TCBC---------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH----------
T ss_pred CcccccCCC-------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----------
Confidence 987654321 112234569999999999988775 88999999999999999999999753111
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
+.......+.+.. .. ....++.+++.+||+.||++|||++|+++.
T Consensus 217 -------~~~~~i~~~~~~~--p~----------~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 217 -------ALYKKIMRGKYDV--PK----------WLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -------HHHHHHHHTCCCC--CT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -------HHHHHHHcCCCCC--CC----------CCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1111111111100 00 112457889999999999999999999863
No 59
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.3e-40 Score=378.25 Aligned_cols=408 Identities=23% Similarity=0.265 Sum_probs=192.7
Q ss_pred CCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCC-------------CEEEeecccCCCCCC
Q 037275 49 HQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRL-------------EALVLANNSFSGKIP 115 (992)
Q Consensus 49 ~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~n~l~~~~p 115 (992)
..+++.++++++.+ |.+|+.++++++|++|++++|.+.|.+|.+++.+++| ++|++++|+++ .+|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCC
Confidence 35688999999999 9999999999999999999999999999999999987 56666666655 344
Q ss_pred cccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCC
Q 037275 116 TNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLR 195 (992)
Q Consensus 116 ~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 195 (992)
.. .++|++|++++|++++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|.+.+ +| .|++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~ 153 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSS 153 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCC
Confidence 31 2455555555555553 4432 2345555555555552 2221 1345555555555533 44 355555
Q ss_pred cccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeee
Q 037275 196 NLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTL 275 (992)
Q Consensus 196 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L 275 (992)
+|++|++++|++++ +|..+ .+|++|++++|+++ + +| .++.+++|++|++
T Consensus 154 ~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~-------------------------~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 154 FLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLE-------------------------E-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCS-------------------------S-CC-CCTTCTTCCEEEC
T ss_pred CCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCC-------------------------c-Cc-cccCCCCCCEEEC
Confidence 55555555555543 33322 24444444444444 3 33 3566666666666
Q ss_pred ccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEee
Q 037275 276 FDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIA 355 (992)
Q Consensus 276 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~ 355 (992)
++|++++.+. . ..+|++|++++|+++.++. +..+++|+.|++++|++.+ +|.. ...|+.|+++
T Consensus 203 ~~N~l~~l~~-~---~~~L~~L~l~~n~l~~lp~--------~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~ 265 (454)
T 1jl5_A 203 DNNSLKKLPD-L---PLSLESIVAGNNILEELPE--------LQNLPFLTTIYADNNLLKT-LPDL----PPSLEALNVR 265 (454)
T ss_dssp CSSCCSSCCC-C---CTTCCEEECCSSCCSSCCC--------CTTCTTCCEEECCSSCCSS-CCSC----CTTCCEEECC
T ss_pred CCCcCCcCCC-C---cCcccEEECcCCcCCcccc--------cCCCCCCCEEECCCCcCCc-cccc----ccccCEEECC
Confidence 6666664222 1 1466666666666654431 4456666666666666664 2221 2346666666
Q ss_pred CCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCC
Q 037275 356 GNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSI 435 (992)
Q Consensus 356 ~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 435 (992)
+|++++ +|.. +++|++|++++|++++. |.. .++|+.|++++|++++ ++.. .++|+.|++++|++++ +
T Consensus 266 ~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-l 332 (454)
T 1jl5_A 266 DNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-L 332 (454)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-C
T ss_pred CCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-c
Confidence 666664 3322 25666777777766641 211 1466677777776664 2211 1356667777777664 4
Q ss_pred CCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccc--cCCcccc
Q 037275 436 PPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSG--EIPVTLS 513 (992)
Q Consensus 436 ~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~ 513 (992)
|.. +++|+.| ++++|+++ .+|. .+++|++|++++|++++ .+|..+.
T Consensus 333 p~~---~~~L~~L-------------------------~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~ 380 (454)
T 1jl5_A 333 PAL---PPRLERL-------------------------IASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVE 380 (454)
T ss_dssp CCC---CTTCCEE-------------------------ECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCC
T ss_pred ccc---CCcCCEE-------------------------ECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHH
Confidence 433 3455555 55555555 4454 46889999999999987 5665554
Q ss_pred cccccceeeccCCcccccCCccccccCCCCEEECCCcccCC--CChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 514 ACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSG--QIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 514 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
. |+.|.+.+.+|.. +++|+.|++++|++++ .+|. +|+.|.+.+|.+.+..+.
T Consensus 381 ~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 381 D--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPYEF 434 (454)
T ss_dssp E--------EECCC---------------------------------------------------------
T ss_pred h--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCcccc
Confidence 3 3457777777763 5789999999999986 5554 466777888888876553
No 60
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=364.09 Aligned_cols=273 Identities=19% Similarity=0.258 Sum_probs=212.7
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
++|++.++||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.. ......+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCceEE
Confidence 57899999999999999999999899999999997433 3345678899999999999999999998753 2344679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee----CCCCcEEEee
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL----DQDLVAHLGD 833 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~D 833 (992)
+||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 86 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGG---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred EEEeCCCCCCHHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 99999999999999986543 23489999999999999999999999 99999999999999 7888999999
Q ss_pred cccceecCCCCCCCCcccCCCCCccccccccccccccc--------CCCcCcccchhhHHHHHHHHHhCCCCCCCCccCC
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM--------GGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQG 905 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~ 905 (992)
||+++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.......
T Consensus 160 fg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 230 (319)
T 4euu_A 160 FGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230 (319)
T ss_dssp CTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG
T ss_pred CCCceecCCCC---------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc
Confidence 99998765432 122346899999999876 5788999999999999999999999997543322
Q ss_pred ccHHHHHhhhCChhHHHHHHhhHhHhhhc-------------cCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 037275 906 LTLHEFARTALPDKVMEIVDSVLLLEVQA-------------SNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM 972 (992)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 972 (992)
.... .+.......... ......+............+.+++.+||+.||++|||+
T Consensus 231 ~~~~-------------~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~ 297 (319)
T 4euu_A 231 RNKE-------------VMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGF 297 (319)
T ss_dssp GCHH-------------HHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCH
T ss_pred hhHH-------------HHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccH
Confidence 1111 111111111000 00001111112235567789999999999999999999
Q ss_pred HHHHHHHHHH
Q 037275 973 RDVVAKLCRA 982 (992)
Q Consensus 973 ~evl~~L~~~ 982 (992)
+|+++...+.
T Consensus 298 ~ell~h~~d~ 307 (319)
T 4euu_A 298 DQFFAETSDI 307 (319)
T ss_dssp HHHHHHHHHH
T ss_pred HHhhhccHHH
Confidence 9999887754
No 61
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.9e-40 Score=367.71 Aligned_cols=252 Identities=22% Similarity=0.323 Sum_probs=203.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC------chhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG------ASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
.++|++.+.||+|+||+||+|++..+|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----- 85 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE----- 85 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE-----
Confidence 45799999999999999999999999999999999754322 3467899999999999999999999954
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC----
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL---- 827 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 827 (992)
.....++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 86 NRTDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCcc
Confidence 4567799999999999999997543 589999999999999999999999 999999999999998877
Q ss_pred cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCcc
Q 037275 828 VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLT 907 (992)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~ 907 (992)
.+||+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+....
T Consensus 157 ~vkl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--- 224 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--- 224 (361)
T ss_dssp CEEECCCSSCEECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---
T ss_pred CEEEEecCCceEcCCCC---------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---
Confidence 79999999998765421 123356999999999999999999999999999999999999999763211
Q ss_pred HHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 908 LHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+ .........+.. . ..........+.+++.+||..||++|||+.|+++
T Consensus 225 --~------------~~~~i~~~~~~~------~--~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 225 --E------------TLANITAVSYDF------D--EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --H------------HHHHHHTTCCCC------C--HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --H------------HHHHHHhcCCCC------C--chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 111111000000 0 0000112345889999999999999999999985
No 62
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=8e-40 Score=357.60 Aligned_cols=268 Identities=22% Similarity=0.386 Sum_probs=206.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHh--ccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRN--IRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||+||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++... ......
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCce
Confidence 46899999999999999999998 6899999998533 34556677777776 7999999999987542 234566
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeccCCCCCeeeCCCC
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIH--------HHCQPPVVHGDLKPSNVLLDQDL 827 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~ 827 (992)
.++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTS
T ss_pred eEEehhhccCCCHHHHHhhc-------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCC
Confidence 79999999999999999643 4899999999999999999999 77 999999999999999999
Q ss_pred cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC------CcCcccchhhHHHHHHHHHhC-------
Q 037275 828 VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG------EASMTGDVYSFGILLLEMFTR------- 894 (992)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg------- 894 (992)
.+||+|||+|+........ .........||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~ 226 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQ----LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226 (301)
T ss_dssp CEEECCCTTCEEEETTTTE----EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CEEEeeCCCeeeccccccc----ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccc
Confidence 9999999999876543211 11112334799999999998876 566799999999999999999
Q ss_pred ---CCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCC
Q 037275 895 ---RRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERME 971 (992)
Q Consensus 895 ---~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 971 (992)
+.||................... ...+..............++.+++.+||+.||++|||
T Consensus 227 ~~~~~pf~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 289 (301)
T 3q4u_A 227 EDYKPPFYDVVPNDPSFEDMRKVVCV-----------------DQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 289 (301)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTT-----------------SCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCC
T ss_pred ccccccccccCCCCcchhhhhHHHhc-----------------cCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCC
Confidence 77776543333222222111100 0001111111122345678999999999999999999
Q ss_pred HHHHHHHHHHH
Q 037275 972 MRDVVAKLCRA 982 (992)
Q Consensus 972 ~~evl~~L~~~ 982 (992)
++||++.|+++
T Consensus 290 ~~~i~~~L~~i 300 (301)
T 3q4u_A 290 ALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999999875
No 63
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.3e-40 Score=371.28 Aligned_cols=267 Identities=22% Similarity=0.384 Sum_probs=210.2
Q ss_pred hcCCCCCCccccccceEEEEeEEC-------CCCeEEEEEEeeccCC-CchhHHHHHHHHHHhc-cCCcceeEEEEeecc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLG-------ENGMMVAVKVINLKQK-GASNGFVAECQALRNI-RHRNLIKIITICSSI 748 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 748 (992)
.++|++.+.||+|+||+||+|++. .++..||||+++.... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC--
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc--
Confidence 468899999999999999999863 3567899999964432 2346789999999999 8999999999964
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccch----------hhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCC
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQ----------EARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKP 818 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 818 (992)
.....++||||+++|+|.+++....... ....+++.+++.++.||+.||+|||++ +|+||||||
T Consensus 158 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 158 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred ---cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 3445699999999999999998754210 123589999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCC
Q 037275 819 SNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRP 897 (992)
Q Consensus 819 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p 897 (992)
+||+++.++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p 305 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTT------CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred hhEEECCCCCEEEccccCCcccCcccce------ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999876543211 11223457889999999999999999999999999999999 9999
Q ss_pred CCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 898 TDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 898 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
|.+..... ....+.. ...... ......++.+++.+||+.||++|||+.|+++
T Consensus 306 ~~~~~~~~--------------~~~~~~~----~~~~~~----------~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 306 YPGIPVEE--------------LFKLLKE----GHRMDK----------PANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp STTCCGGG--------------HHHHHHT----TCCCCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHHH--------------HHHHHhc----CCCCCC----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 97642211 1111100 000000 0112345889999999999999999999999
Q ss_pred HHHHHHHhh
Q 037275 978 KLCRARDTF 986 (992)
Q Consensus 978 ~L~~~~~~~ 986 (992)
.|+++....
T Consensus 358 ~L~~il~~~ 366 (370)
T 2psq_A 358 DLDRILTLT 366 (370)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999987643
No 64
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.3e-40 Score=362.20 Aligned_cols=249 Identities=26% Similarity=0.335 Sum_probs=203.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||+||+|+...+|+.||+|+++.. .......+.+|+.+++.++||||+++++++. ...
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~-----~~~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-----THD 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE-----CSS
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEE-----eCC
Confidence 35899999999999999999999989999999999743 3445677899999999999999999999854 455
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeec
Confidence 7799999999999999997543 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+....
T Consensus 150 G~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---------- 211 (337)
T 1o6l_A 150 GLCKEGISD--------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---------- 211 (337)
T ss_dssp TTCBCSCCT--------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH----------
T ss_pred cchhhcccC--------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH----------
Confidence 999854321 11233457999999999999999999999999999999999999999753111
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM-----EMRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 977 (992)
............ .+ .....++.+++.+||+.||++|| +++||++
T Consensus 212 -------~~~~~i~~~~~~------~p------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 212 -------RLFELILMEEIR------FP------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -------HHHHHHHHCCCC------CC------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -------HHHHHHHcCCCC------CC------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 111111111100 00 01134588999999999999999 8999875
No 65
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.7e-40 Score=374.01 Aligned_cols=261 Identities=27% Similarity=0.397 Sum_probs=208.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|++++++++||||+++++++.. ....
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~ 187 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQPI 187 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-----SSSC
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-----CCCc
Confidence 4578899999999999999999988899999999864322 233568899999999999999999999643 3456
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred EEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 999999999999999986432 489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 915 (992)
++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||.+....
T Consensus 260 s~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----------- 322 (377)
T 3cbl_A 260 SREEADGVY------AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----------- 322 (377)
T ss_dssp CEECTTSEE------ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----------
T ss_pred ceecCCCce------eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----------
Confidence 986543211 111122346788999999998899999999999999999998 99999764221
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
...+.+.. ....... ...+.++.+++.+||+.||++|||++||++.|+++.+.
T Consensus 323 ---~~~~~~~~----~~~~~~~----------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 323 ---QTREFVEK----GGRLPCP----------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ---HHHHHHHT----TCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHc----CCCCCCC----------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 01111111 0000000 11234588999999999999999999999999998764
No 66
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=364.61 Aligned_cols=263 Identities=26% Similarity=0.398 Sum_probs=206.5
Q ss_pred hcCCCCCCccccccceEEEEeEECCC---CeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGEN---GMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.+.||+|+||+||+|++..+ +..||||+++... ....+.+.+|+.++++++||||+++++++. ..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT-----RG 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----GG
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eC
Confidence 35788899999999999999999744 4569999997442 233467899999999999999999999964 34
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHDG-----QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CccEEEeeCCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECC
Confidence 556999999999999999975432 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 912 (992)
||+++........ ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....
T Consensus 195 fg~a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-------- 261 (325)
T 3kul_A 195 FGLSRVLEDDPDA-----AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-------- 261 (325)
T ss_dssp CSSCEECC----C-----CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------
T ss_pred CCcccccccCccc-----eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------
Confidence 9999877543211 111223346788999999998999999999999999999999 99999753221
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
+........ .... ........+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 262 ---------~~~~~~~~~-~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 262 ---------DVISSVEEG-YRLP----------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp ---------HHHHHHHTT-CCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred ---------HHHHHHHcC-CCCC----------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 111111100 0000 00112346889999999999999999999999999987654
No 67
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=367.08 Aligned_cols=296 Identities=22% Similarity=0.318 Sum_probs=211.8
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHH--HHhccCCcceeEEEEeecccccCcc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQA--LRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
..++|++.+.||+|+||+||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++......+..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred ChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 356899999999999999999988 68999999996432 3344445444 4458999999999877665566677
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcC------CCCeEeccCCCCCeeeCCCCc
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHC------QPPVVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~ 828 (992)
.+++||||+++|+|.+++.... .++..++.++.|++.||+|||+.. .++|+||||||+||+++.++.
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 158 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT-------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT 158 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSC
T ss_pred eEEEEEecCCCCcHHHHHhhcc-------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCc
Confidence 7899999999999999997543 588899999999999999999862 238999999999999999999
Q ss_pred EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC-------CCcCcccchhhHHHHHHHHHhCCCCCCCC
Q 037275 829 AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-------GEASMTGDVYSFGILLLEMFTRRRPTDGM 901 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~elltg~~pf~~~ 901 (992)
+||+|||+++.+...................||+.|+|||++.+ ..++.++|||||||++|||++|..||...
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 99999999988765432222112223344579999999999877 46778999999999999999997776443
Q ss_pred ccCCccHHHHHhhh-CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 037275 902 FNQGLTLHEFARTA-LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLC 980 (992)
Q Consensus 902 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 980 (992)
.........+.... ......+. ...... .......+...........++.+++.+||+.||++|||++|+++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 239 ESVPEYQMAFQTEVGNHPTFEDM-QVLVSR---EKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp SCCCCCCCTTHHHHCSSCCHHHH-HHHHTT---SCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred cchhHHHHhhhcccCCCchHHHH-Hhhhcc---cccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 22211111111111 11111111 111100 01111112222223345667999999999999999999999999999
Q ss_pred HHHHhhhh
Q 037275 981 RARDTFLG 988 (992)
Q Consensus 981 ~~~~~~~~ 988 (992)
++.+.+..
T Consensus 315 ~ll~~~~~ 322 (336)
T 3g2f_A 315 ELMMIWER 322 (336)
T ss_dssp HHHHCCCC
T ss_pred HHHHHHHh
Confidence 99887654
No 68
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.3e-40 Score=375.19 Aligned_cols=263 Identities=21% Similarity=0.237 Sum_probs=207.0
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeec
Q 037275 671 YAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSS 747 (992)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 747 (992)
+.++....++|++.++||+|+||+||+|++..+++.||+|+++.. .......+.+|+.+++.++||||+++++++.
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~- 144 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ- 144 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE-
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-
Confidence 445555678999999999999999999999989999999999642 2333455889999999999999999999864
Q ss_pred ccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC
Q 037275 748 IDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL 827 (992)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 827 (992)
+....++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 145 ----~~~~~~lV~Ey~~gg~L~~~l~~~~~-----~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 145 ----DDNNLYLVMDYYVGGDLLTLLSKFED-----RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp ----CSSEEEEEECCCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred ----eCCEEEEEEecCCCCcHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCC
Confidence 45667999999999999999986432 489999999999999999999999 999999999999999999
Q ss_pred cEEEeecccceecCCCCCCCCcccCCCCCccccccccccccccc-----CCCcCcccchhhHHHHHHHHHhCCCCCCCCc
Q 037275 828 VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM-----GGEASMTGDVYSFGILLLEMFTRRRPTDGMF 902 (992)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 902 (992)
.+||+|||+|+...... .......+||+.|+|||++. ...++.++|||||||++|||++|+.||.+..
T Consensus 213 ~vkL~DFGla~~~~~~~-------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 285 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDG-------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285 (437)
T ss_dssp CEEECCCTTCEECCTTS-------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred CEEEcchhhhhhcccCC-------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999998764321 11123357999999999986 5679999999999999999999999997632
Q ss_pred cCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 037275 903 NQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTE--RMEMRDVVA 977 (992)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 977 (992)
.. +....+.........+... .....++.+++.+||..+|++ ||+++|+++
T Consensus 286 ~~-----------------~~~~~i~~~~~~~~~p~~~-------~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 286 LV-----------------ETYGKIMNHKERFQFPTQV-------TDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HH-----------------HHHHHHHTHHHHCCCCSSC-------CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hh-----------------HHHHhhhhccccccCCccc-------ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 11 1111111111100000000 011345789999999998888 999999875
No 69
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.9e-40 Score=365.14 Aligned_cols=254 Identities=22% Similarity=0.296 Sum_probs=202.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+.+++.++||||+++++++. .....
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe-----cCCeE
Confidence 4689999999999999999999998999999999964432 23466889999999999999999999864 45567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeec
Confidence 99999999999999986543 489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
++.+.... .........||+.|+|||++.+..+ +.++||||+||++|+|++|+.||............+....
T Consensus 152 a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~ 225 (323)
T 3tki_A 152 ATVFRYNN------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225 (323)
T ss_dssp CEECEETT------EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC
T ss_pred cceeccCC------cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc
Confidence 98654321 1122234579999999999988775 7789999999999999999999986543322222221111
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
... .........+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~--------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 226 TYL--------------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TTS--------------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccC--------------------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000 000112345789999999999999999999975
No 70
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-40 Score=362.09 Aligned_cols=252 Identities=18% Similarity=0.285 Sum_probs=203.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|++..+++.||+|++... ......+.+|+.+++.++||||+++++++. +....+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFE-----SMEELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEE-----ETTEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEe-----cCCEEE
Confidence 46899999999999999999999999999999998643 334566889999999999999999999964 345679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC--CCcEEEeecc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ--DLVAHLGDFG 835 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg 835 (992)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 78 lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSA-----FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEECCCCCCBHHHHHTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEeCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 9999999999999997543 2489999999999999999999999 9999999999999987 7899999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+....
T Consensus 150 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----------- 209 (321)
T 1tki_A 150 QARQLKPGD---------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ----------- 209 (321)
T ss_dssp TCEECCTTC---------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----------
T ss_pred CCeECCCCC---------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----------
Confidence 998765321 122346899999999999988999999999999999999999999763221
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.........+.. ..........++.+++.+||..||++|||+.|+++
T Consensus 210 ------~~~~~i~~~~~~~--------~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 210 ------QIIENIMNAEYTF--------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ------HHHHHHHHTCCCC--------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ------HHHHHHHcCCCCC--------ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111111110000 00000112346889999999999999999999987
No 71
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.2e-39 Score=360.84 Aligned_cols=269 Identities=20% Similarity=0.255 Sum_probs=210.7
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCcceEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+.+++++ +||||+++++++.. ....+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-----~~~~~ 81 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC-----GKYNA 81 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE-----TTEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEec-----CCccE
Confidence 57899999999999999999998899999999986443 345688999999999 99999999998643 45679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc-----EEEe
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV-----AHLG 832 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~ 832 (992)
+||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 82 lv~e~~-~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCD-----RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp EEEECC-CCBHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred EEEEeC-CCCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 999999 999999998643 2589999999999999999999999 9999999999999999887 9999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
|||+++........... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ..+..
T Consensus 153 DFg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~ 229 (330)
T 2izr_A 153 DFALAKEYIDPETKKHI-PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERY 229 (330)
T ss_dssp CCTTCEESBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHH
T ss_pred EcccceeeecCCCCccc-cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHH
Confidence 99999976543221111 1112345679999999999999999999999999999999999999998753221 11111
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
........... .+ ......+ ++.+++..||+.||.+||++++|.+.|+++.+..
T Consensus 230 ------------~~i~~~~~~~~------~~-~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 230 ------------QKIGDTKRATP------IE-VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp ------------HHHHHHHHHSC------HH-HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ------------HHHHhhhccCC------HH-HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 10000000000 00 0000012 6899999999999999999999999999887654
No 72
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4e-40 Score=369.58 Aligned_cols=281 Identities=17% Similarity=0.245 Sum_probs=212.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCC-----CeEEEEEEeeccCCC-----------chhHHHHHHHHHHhccCCcceeE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGEN-----GMMVAVKVINLKQKG-----------ASNGFVAECQALRNIRHRNLIKI 741 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~ 741 (992)
.++|++.+.||+|+||+||+|.+..+ ++.||||++...... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 45899999999999999999998654 578999998643311 11223445556677789999999
Q ss_pred EEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCe
Q 037275 742 ITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNV 821 (992)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 821 (992)
++++... ..+..+.++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||
T Consensus 114 ~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Ni 183 (364)
T 3op5_A 114 WGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEANA-----KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNL 183 (364)
T ss_dssp EEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred Eeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHE
Confidence 9997652 23346679999999 999999998643 2599999999999999999999999 999999999999
Q ss_pred eeC--CCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCC
Q 037275 822 LLD--QDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTD 899 (992)
Q Consensus 822 ll~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 899 (992)
+++ .++.+||+|||+|+.+......... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~ 262 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAY-AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE 262 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCS-SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEecCCCCeEEEEECCcceecccCCccccc-ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 998 8899999999999876543221111 1122244569999999999999999999999999999999999999998
Q ss_pred CCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 037275 900 GMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKL 979 (992)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 979 (992)
+.... .................+++..+.. ...+.++.+++..||+.||++||++++|++.|
T Consensus 263 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l 324 (364)
T 3op5_A 263 DNLKD-PKYVRDSKIRYRENIASLMDKCFPA-----------------ANAPGEIAKYMETVKLLDYTEKPLYENLRDIL 324 (364)
T ss_dssp GGTTC-HHHHHHHHHHHHHCHHHHHHHHSCT-----------------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred ccccC-HHHHHHHHHHhhhhHHHHHHHhccc-----------------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 64322 1222222222222333333322100 11134688999999999999999999999999
Q ss_pred HHHHHhhh
Q 037275 980 CRARDTFL 987 (992)
Q Consensus 980 ~~~~~~~~ 987 (992)
+++.+...
T Consensus 325 ~~~~~~~~ 332 (364)
T 3op5_A 325 LQGLKAIG 332 (364)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99887653
No 73
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3e-40 Score=358.82 Aligned_cols=261 Identities=22% Similarity=0.398 Sum_probs=203.7
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC---chhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG---ASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
++|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|+.++++++||||+++++++. ....
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~~~ 85 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE-----EDDC 85 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE-----CSSE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee-----eCCe
Confidence 5799999999999999999999989999999998644332 2357889999999999999999999953 4566
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 156 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFG 156 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCS
T ss_pred EEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCC
Confidence 799999999999999997643 589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
+++...... ........||+.|+|||++.+..++.++||||+||++|+|++|+.||.+....... .......
T Consensus 157 ~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~-~~~~~~~ 228 (294)
T 4eqm_A 157 IAKALSETS-------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-IKHIQDS 228 (294)
T ss_dssp SSTTC--------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH-HHHHSSC
T ss_pred Ccccccccc-------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHhhcc
Confidence 998654321 11223356899999999999999999999999999999999999999763221100 0000000
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM-EMRDVVAKLCRARD 984 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~ 984 (992)
.+..... .....+..+.+++.+||+.||++|| +++++.+.|+++..
T Consensus 229 ~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 229 VPNVTTD-----------------------VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp CCCHHHH-----------------------SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred CCCcchh-----------------------cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 0100000 0011234688999999999999999 89999998887643
No 74
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.4e-40 Score=351.86 Aligned_cols=257 Identities=25% Similarity=0.430 Sum_probs=207.7
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQAI 758 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 758 (992)
++|++.+.||+|+||+||+|++. +++.||+|++... ....+.+.+|++++++++||||+++++++. .....++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 82 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAPICL 82 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSSEEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCceEE
Confidence 57889999999999999999997 6888999999643 334567999999999999999999999964 3455799
Q ss_pred EEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccce
Q 037275 759 VYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAK 838 (992)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (992)
||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++
T Consensus 83 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 154 (269)
T 4hcu_A 83 VFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTR 154 (269)
T ss_dssp EEECCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGG
T ss_pred EEEeCCCCcHHHHHHhcCc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccc
Confidence 9999999999999976443 489999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhCC
Q 037275 839 FLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTALP 917 (992)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 917 (992)
...... ........+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||......
T Consensus 155 ~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------------- 214 (269)
T 4hcu_A 155 FVLDDQ-------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------------- 214 (269)
T ss_dssp GBCCHH-------HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------------
T ss_pred cccccc-------cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-------------
Confidence 654321 112233457889999999998999999999999999999999 99999753211
Q ss_pred hhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 918 DKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
+........ ..... ......++.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 215 ----~~~~~~~~~-~~~~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 215 ----EVVEDISTG-FRLYK----------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ----HHHHHHHTT-CCCCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----HHHHHHhcC-ccCCC----------CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 111111000 00000 001134588999999999999999999999999998764
No 75
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.4e-40 Score=352.28 Aligned_cols=258 Identities=28% Similarity=0.410 Sum_probs=207.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|++. ++..||+|+++... ...+.+.+|++++++++||||+++++++. .....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCS-----KEYPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCceE
Confidence 457899999999999999999986 67889999996433 34567899999999999999999999963 445679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 151 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGK-----GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMT 151 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCE
T ss_pred EEEEccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccc
Confidence 99999999999999976542 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
........ .......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||......
T Consensus 152 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------------ 212 (268)
T 3sxs_A 152 RYVLDDQY-------VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS------------ 212 (268)
T ss_dssp EECCTTCE-------EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH------------
T ss_pred eecchhhh-------hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH------------
Confidence 87654321 11223456788999999998899999999999999999999 99999753211
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
+.......... .... ......+.+++.+||+.||++|||++|+++.|+++++.
T Consensus 213 -----~~~~~~~~~~~-~~~~----------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 213 -----EVVLKVSQGHR-LYRP----------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -----HHHHHHHTTCC-CCCC----------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -----HHHHHHHcCCC-CCCC----------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 00110000000 0000 01134588999999999999999999999999988654
No 76
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.7e-40 Score=359.35 Aligned_cols=280 Identities=21% Similarity=0.334 Sum_probs=191.9
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.+.||+|+||+||+|.+..+++.||+|+++... ......+.+|+.++++++||||+++++++. ..+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH-----TENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC-----CTTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEE-----ECCeE
Confidence 458999999999999999999999899999999997543 334567889999999999999999999954 45567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||++ |+|.+++...........+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999997 69999998654332334589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..... .........
T Consensus 155 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~ 225 (317)
T 2pmi_A 155 ARAFGIPV--------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIM 225 (317)
T ss_dssp CEETTSCC--------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred ceecCCCc--------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHh
Confidence 98764321 112234689999999998764 68999999999999999999999998643221 111111100
Q ss_pred -C-ChhHHHHHHhhHhHhhhccCCCCCCccc------cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 -L-PDKVMEIVDSVLLLEVQASNSRSCGDER------LRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
. ++......... ..+............ ........++.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 226 GTPNESLWPSVTKL--PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CSCCTTTCGGGGGC--TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCChhHhhhhhhh--hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 00000000000 000000000000000 000012346899999999999999999999975
No 77
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-39 Score=363.29 Aligned_cols=256 Identities=20% Similarity=0.308 Sum_probs=203.0
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-----CCchhHHHHHHHHHHhccCCcceeEEEEeecccccC
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-----KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKG 752 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 752 (992)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++. .
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~ 97 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS-----S 97 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----E
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-----e
Confidence 357999999999999999999999899999999986321 224577899999999999999999999864 3
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc---E
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV---A 829 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~ 829 (992)
....++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred CCEEEEEEeCCCCCCHHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 45679999999999999988754321 23589999999999999999999999 9999999999999987654 9
Q ss_pred EEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHH
Q 037275 830 HLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLH 909 (992)
Q Consensus 830 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~ 909 (992)
||+|||++....... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+...
T Consensus 173 kl~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------ 238 (351)
T 3c0i_A 173 KLGGFGVAIQLGESG--------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------ 238 (351)
T ss_dssp EECCCTTCEECCTTS--------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------
T ss_pred EEecCcceeEecCCC--------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------
Confidence 999999998765421 112335699999999999999999999999999999999999999976311
Q ss_pred HHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 910 EFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+ .........+.. ..........++.+++.+||+.||++|||+.|+++
T Consensus 239 ~------------~~~~i~~~~~~~--------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 239 R------------LFEGIIKGKYKM--------NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp H------------HHHHHHHTCCCC--------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred H------------HHHHHHcCCCCC--------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 011111000000 00000112346889999999999999999999985
No 78
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.8e-40 Score=372.46 Aligned_cols=276 Identities=21% Similarity=0.341 Sum_probs=214.7
Q ss_pred cHHHHHHHhcCCCCCCccccccceEEEEeE-----ECCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhc-cCCcceeEE
Q 037275 670 SYAELSKATNDFSSSNMIGQGSFGFVYKGN-----LGENGMMVAVKVINLKQK-GASNGFVAECQALRNI-RHRNLIKII 742 (992)
Q Consensus 670 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~ 742 (992)
...+.....++|++.+.||+|+||.||+|+ ...+++.||||+++.... ...+.+.+|+++++++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 344555567899999999999999999998 455679999999964332 2345689999999999 799999999
Q ss_pred EEeecccccCcceEEEEEEeccCCCHHHHHhhcccch-------------------------------------------
Q 037275 743 TICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQ------------------------------------------- 779 (992)
Q Consensus 743 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------- 779 (992)
+++.. .....++||||+++|+|.+++.......
T Consensus 93 ~~~~~----~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 93 GACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp EEECS----TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeec----CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 99753 2344699999999999999998754210
Q ss_pred -----------------hhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccceecCC
Q 037275 780 -----------------EARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFLSS 842 (992)
Q Consensus 780 -----------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (992)
....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 012289999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhCChhHH
Q 037275 843 SPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTALPDKVM 921 (992)
Q Consensus 843 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 921 (992)
... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||.+...... ..
T Consensus 246 ~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-------------~~ 306 (359)
T 3vhe_A 246 DPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------------FC 306 (359)
T ss_dssp CTT------CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-------------HH
T ss_pred ccc------chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-------------HH
Confidence 221 112234568899999999999999999999999999999998 9999976432211 11
Q ss_pred HHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 922 EIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
..+. ........ .....++.+++.+||+.||++|||++||++.|+++...
T Consensus 307 ~~~~----~~~~~~~~----------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 307 RRLK----EGTRMRAP----------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHH----HTCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHH----cCCCCCCC----------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 1111 00000000 01134588999999999999999999999999998764
No 79
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.7e-39 Score=354.49 Aligned_cols=272 Identities=16% Similarity=0.197 Sum_probs=212.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|+.+++.+ +|++++++++++. .....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-----~~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-----EGLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEE-----ETTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCcee
Confidence 35799999999999999999999889999999998533 2345688999999999 7999999999853 44567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc-----EEE
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV-----AHL 831 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl 831 (992)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl 152 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGR-----KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYV 152 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred EEEEEec-CCCHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEE
Confidence 9999999 9999999986532 489999999999999999999999 9999999999999987776 999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+|||+++........... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+...... .+.
T Consensus 153 ~Dfg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~ 229 (298)
T 1csn_A 153 VDFGMVKFYRDPVTKQHI-PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQK 229 (298)
T ss_dssp CCCTTCEESBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHH
T ss_pred EECccccccccccccccc-cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHH
Confidence 999999987654321111 11223456799999999999999999999999999999999999999987432211 110
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
. ..+.......... ........++.+++.+||+.||++|||+++|++.|+++.+...
T Consensus 230 ~--------~~~~~~~~~~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 230 Y--------ERIGEKKQSTPLR-----------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp H--------HHHHHHHHHSCHH-----------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred H--------HHHHhhccCccHH-----------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 0 0000000000000 0000123568999999999999999999999999999987654
No 80
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5.5e-40 Score=358.80 Aligned_cols=265 Identities=27% Similarity=0.407 Sum_probs=202.5
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.++||+|+||+||+|++. ..+|+|+++.... ...+.+.+|+.++++++||||+++++++.. ..
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred ccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc------Cc
Confidence 458999999999999999999874 3589998864433 234678999999999999999999998532 33
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg 177 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCC
T ss_pred EEEEEecCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCC
Confidence 5899999999999999975443 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCccccccccccccccc---CCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM---GGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
+|+...... .........||+.|+|||++. +..++.++|||||||++|||++|+.||......+...
T Consensus 178 ~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~---- 247 (307)
T 3lb7_A 178 LATVKSRWS------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII---- 247 (307)
T ss_dssp SSCC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH----
T ss_pred Cceeccccc------ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH----
Confidence 998654321 112223346899999999886 5678999999999999999999999997643221100
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLG 988 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 988 (992)
..+. ........... .......+.+++.+||+.||++|||+.||++.|+.+...+..
T Consensus 248 ---------~~~~----~~~~~~~~~~~------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 248 ---------FMVG----RGYASPDLSKL------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp ---------HHHH----HTCCCCCSTTS------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred ---------HHHh----cCCCCcchhhh------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 0000 00000000000 011234688999999999999999999999999999876543
No 81
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1e-39 Score=357.51 Aligned_cols=275 Identities=23% Similarity=0.333 Sum_probs=200.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.++||+|+||+||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++. ....
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH-----SERC 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----CSSC
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc-----cCCE
Confidence 468999999999999999999996 68999999986443 223467889999999999999999999954 4556
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++ +|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 164 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDENKT-----GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFG 164 (311)
T ss_dssp EEEEEECCSE-EHHHHHHTCTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEcCCCC-CHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCc
Confidence 7999999974 88888876543 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
+++...... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+....+. .......
T Consensus 165 ~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~ 235 (311)
T 3niz_A 165 LARAFGIPV--------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSI 235 (311)
T ss_dssp TCEETTSCC--------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHH
T ss_pred CceecCCCc--------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHH
Confidence 998764321 11223468999999999876 5689999999999999999999999987544322 2221111
Q ss_pred h---CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 A---LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
. .+..+....+................ ..........++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 236 LGTPNPREWPQVQELPLWKQRTFQVFEKKP-WSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HCCCCTTTSGGGTTSHHHHSCCCCCCCCCC-HHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HCCCChHHhhhhhccchhhhcccccccCCc-HHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1 11111100000000000000000000 00000112346889999999999999999999985
No 82
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=372.13 Aligned_cols=255 Identities=19% Similarity=0.261 Sum_probs=203.2
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
...++|++.+.||+|+||+||+|.+..+|+.||+|++..... ...+.+.+|+.++++++||||+++++++. ..
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-----~~ 82 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS-----EE 82 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE-----CS
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE-----EC
Confidence 345689999999999999999999999999999999975432 23456889999999999999999999854 45
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC---CCCcEE
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD---QDLVAH 830 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~k 830 (992)
...++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+|
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~~------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vk 153 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVARE------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVK 153 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEE
T ss_pred CEEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEE
Confidence 66799999999999999998643 489999999999999999999999 999999999999998 567899
Q ss_pred EeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHH
Q 037275 831 LGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHE 910 (992)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~ 910 (992)
|+|||+|....... .......||+.|+|||++.+..++.++||||+||++|+|++|++||.+....
T Consensus 154 L~DFG~a~~~~~~~--------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~------ 219 (444)
T 3soa_A 154 LADFGLAIEVEGEQ--------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH------ 219 (444)
T ss_dssp ECCCSSCBCCCTTC--------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------
T ss_pred EccCceeEEecCCC--------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH------
Confidence 99999998665321 1223457999999999999999999999999999999999999999753211
Q ss_pred HHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 911 FARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.......+.+.... ........++.+++.+||+.||++|||+.|+++
T Consensus 220 -----------~~~~~i~~~~~~~~~--------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 220 -----------RLYQQIKAGAYDFPS--------PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp -----------HHHHHHHHTCCCCCT--------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -----------HHHHHHHhCCCCCCc--------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111111111111000 000112345889999999999999999999986
No 83
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=357.92 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=202.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC------chhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG------ASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
.++|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----- 84 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE----- 84 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----
Confidence 34689999999999999999999989999999999754321 3567899999999999999999999964
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC----
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL---- 827 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 827 (992)
.....++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLAEKE------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTSS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSC
T ss_pred eCCEEEEEEEcCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCC
Confidence 4556799999999999999997543 589999999999999999999999 999999999999999887
Q ss_pred cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCcc
Q 037275 828 VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLT 907 (992)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~ 907 (992)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+..... .
T Consensus 156 ~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~ 225 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGN---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-T 225 (326)
T ss_dssp CEEECCCTTCEECCTTS---------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-H
T ss_pred CEEEEECCCCeECCCCC---------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-H
Confidence 89999999998765321 1223468999999999998999999999999999999999999997632110 0
Q ss_pred HHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 908 LHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
............ ..........+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 226 LANVSAVNYEFE------------------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHTCCCCC------------------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCCCcC------------------------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000000000 0000112345789999999999999999999986
No 84
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=365.33 Aligned_cols=250 Identities=24% Similarity=0.304 Sum_probs=198.6
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccC
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKG 752 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 752 (992)
..++|++.++||+|+||+||+|++..+++.||||+++.. .......+.+|..+++.+ +||||+++++++. .
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-----~ 95 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ-----T 95 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----C
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE-----e
Confidence 356899999999999999999999989999999999743 233456688999999988 7999999999853 4
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEe
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLG 832 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 832 (992)
....++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 96 PDRLFFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEc
Confidence 556799999999999999997643 489999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
|||+|+..... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||.+....
T Consensus 167 DFG~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------- 230 (353)
T 3txo_A 167 DFGMCKEGICN--------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-------- 230 (353)
T ss_dssp CCTTCBCSCC-----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------
T ss_pred cccceeecccC--------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--------
Confidence 99999753321 12233457999999999999889999999999999999999999999763211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM------RDVVA 977 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 977 (992)
+........... .+ .....++.+++.+||+.||++||++ +|+++
T Consensus 231 ---------~~~~~i~~~~~~------~p------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 231 ---------DLFEAILNDEVV------YP------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---------HHHHHHHHCCCC------CC------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---------HHHHHHHcCCCC------CC------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 111111111110 00 0113457899999999999999998 66654
No 85
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.9e-39 Score=363.92 Aligned_cols=253 Identities=22% Similarity=0.283 Sum_probs=198.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.++||+|+||+||+|++..+++.||+|+++... ......+.+|..+++++ +||||+++++++. ..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~-----~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE-----CS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE-----EC
Confidence 468999999999999999999999999999999997542 33345688999999887 8999999999854 45
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEee
Confidence 67799999999999999997643 589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||+|+.... ........+||+.|+|||++.+..++.++||||+||++|||++|+.||..........
T Consensus 197 FGla~~~~~--------~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~----- 263 (396)
T 4dc2_A 197 YGMCKEGLR--------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD----- 263 (396)
T ss_dssp CTTCBCCCC--------TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC----------
T ss_pred cceeeeccc--------CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccc-----
Confidence 999985322 1122344679999999999999999999999999999999999999997532211100
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM 972 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 972 (992)
......+.......... .+ .....++.+++.+||+.||++||++
T Consensus 264 ---~~~~~~~~~~i~~~~~~------~p------~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 264 ---QNTEDYLFQVILEKQIR------IP------RSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----CCHHHHHHHHHHCCCC------CC------TTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---hhhHHHHHHHHhccccC------CC------CcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 00000111111111110 00 0123457899999999999999996
No 86
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=5e-40 Score=362.98 Aligned_cols=273 Identities=22% Similarity=0.374 Sum_probs=197.2
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCe---EEEEEEeecc--CCCchhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGM---MVAVKVINLK--QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
..++|++.+.||+|+||+||+|++..++. .||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34589999999999999999999876654 8999999654 334457789999999999999999999997653322
Q ss_pred C-cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEE
Q 037275 752 G-VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAH 830 (992)
Q Consensus 752 ~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 830 (992)
+ ....++||||+++|+|.+++...........+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 1 123489999999999999998665433334689999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHH
Q 037275 831 LGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLH 909 (992)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~ 909 (992)
|+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||.+..... ..
T Consensus 178 l~Dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~ 249 (323)
T 3qup_A 178 VADFGLSRKIYSGDY------YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--IY 249 (323)
T ss_dssp ECCCCC-----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HH
T ss_pred Eeecccccccccccc------ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--HH
Confidence 999999987654321 111223456889999999999999999999999999999999 999997643221 00
Q ss_pred HHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 910 EFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
........ .. .......++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 250 ---------------~~~~~~~~-~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 250 ---------------NYLIGGNR-LK----------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ---------------HHHHTTCC-CC----------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ---------------HHHhcCCC-CC----------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 00000000 00 00112345889999999999999999999999999987643
No 87
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.7e-40 Score=367.21 Aligned_cols=262 Identities=27% Similarity=0.463 Sum_probs=196.5
Q ss_pred hcCCCCCCccccccceEEEEeEEC---CCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLG---ENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~ 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-----S 118 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-----C
Confidence 357999999999999999999875 457789999996543 2334678999999999999999999999643 4
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 190 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred CceEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECc
Confidence 456999999999999999976532 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 912 (992)
||+++....... .........+++.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 191 fg~a~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-------- 257 (373)
T 2qol_A 191 FGLGRVLEDDPE-----AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-------- 257 (373)
T ss_dssp C---------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------
T ss_pred CccccccccCCc-----cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------
Confidence 999987654321 1111122345788999999999999999999999999999998 99999753211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
.....+.. ...... ......++.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 258 ------~~~~~i~~----~~~~~~----------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 258 ------DVIKAVDE----GYRLPP----------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp ------HHHHHHHT----TEECCC----------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ------HHHHHHHc----CCCCCC----------CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 01111110 000000 011235688999999999999999999999999998764
No 88
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=353.73 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=195.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--------------------------CchhHHHHHHHHHH
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--------------------------GASNGFVAECQALR 731 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 731 (992)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999998999999999864321 12356889999999
Q ss_pred hccCCcceeEEEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 037275 732 NIRHRNLIKIITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPV 811 (992)
Q Consensus 732 ~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 811 (992)
+++||||+++++++.. ......++||||+++++|.+++.. ..+++..++.++.|++.||+|||++ +|
T Consensus 92 ~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPTL-------KPLSEDQARFYFQDLIKGIEYLHYQ---KI 158 (298)
T ss_dssp TCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSCS-------SCCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 9999999999999754 234577999999999999886532 2589999999999999999999999 99
Q ss_pred EeccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCC---cCcccchhhHHHHH
Q 037275 812 VHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGE---ASMTGDVYSFGILL 888 (992)
Q Consensus 812 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il 888 (992)
+||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||++
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l 230 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSS--------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred eccCCCHHHEEECCCCCEEEecCCCcccccccc--------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence 999999999999999999999999998765321 1122346899999999987765 47889999999999
Q ss_pred HHHHhCCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCC
Q 037275 889 LEMFTRRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTE 968 (992)
Q Consensus 889 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 968 (992)
|+|++|+.||.+... . ............ .+. ......++.+++.+||+.||++
T Consensus 231 ~~l~~g~~pf~~~~~-----~------------~~~~~~~~~~~~------~~~----~~~~~~~l~~li~~~l~~dp~~ 283 (298)
T 2zv2_A 231 YCFVFGQCPFMDERI-----M------------CLHSKIKSQALE------FPD----QPDIAEDLKDLITRMLDKNPES 283 (298)
T ss_dssp HHHHHSSCSSCCSSH-----H------------HHHHHHHHCCCC------CCS----SSCCCHHHHHHHHHHTCSCTTT
T ss_pred HHHHHCCCCCCCccH-----H------------HHHHHHhcccCC------CCC----ccccCHHHHHHHHHHhhcChhh
Confidence 999999999975311 0 011111100000 000 0112345889999999999999
Q ss_pred CCCHHHHHH
Q 037275 969 RMEMRDVVA 977 (992)
Q Consensus 969 RPs~~evl~ 977 (992)
|||++|+++
T Consensus 284 R~s~~e~l~ 292 (298)
T 2zv2_A 284 RIVVPEIKL 292 (298)
T ss_dssp SCCHHHHTT
T ss_pred CCCHHHHhc
Confidence 999999975
No 89
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1e-39 Score=354.74 Aligned_cols=274 Identities=18% Similarity=0.283 Sum_probs=200.0
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
++|++.++||+|+||+||+|++..+++.||+|++..... .....+.+|+.++++++||||+++++++. .....
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE-----eCCEE
Confidence 578999999999999999999998999999999975433 23467889999999999999999999964 34567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+++ ++.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTT-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEecCCC-CHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 999999975 6666665433 2489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCC-cCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGE-ASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
++...... .......||+.|+|||++.+.. ++.++||||+||++|||++|..||....+............
T Consensus 148 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~ 219 (292)
T 3o0g_A 148 ARAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219 (292)
T ss_dssp CEECCSCC--------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHH
T ss_pred ceecCCcc--------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh
Confidence 98764321 1223346899999999987765 89999999999999999998888644322211122211111
Q ss_pred CC---hhHHHHHHhhHhHhhhccCC-CCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LP---DKVMEIVDSVLLLEVQASNS-RSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.. ..+... .. ...+..... ...............++.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 220 GTPTEEQWPSM-TK--LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCTTTCTTG-GG--STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhhhhh-cc--cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 000000 00 000000000 0000000001123456789999999999999999999985
No 90
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.1e-39 Score=350.31 Aligned_cols=273 Identities=21% Similarity=0.268 Sum_probs=210.6
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
..++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+.+++.++|++++..++++. ......
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEE----EETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeec----CCCCce
Confidence 3568999999999999999999998899999999875432 3345889999999999998888887764 345567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee---CCCCcEEEee
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL---DQDLVAHLGD 833 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 833 (992)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred EEEEEcc-CCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEec
Confidence 9999999 9999999985432 489999999999999999999999 99999999999999 7889999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCc--cHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGL--TLHEF 911 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~--~~~~~ 911 (992)
||.++........... .........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+...... .....
T Consensus 152 fg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 230 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHI-PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230 (296)
T ss_dssp CTTCEECBCTTTCCBC-CCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH
T ss_pred CccceeccCcccCccC-CCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhh
Confidence 9999987654321111 11223456799999999999999999999999999999999999999987533221 11111
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhh
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLG 988 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 988 (992)
.....+...... ......++.+++.+||+.||++|||++||++.|+++..+...
T Consensus 231 ~~~~~~~~~~~~-----------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 231 SEKKMSTPIEVL-----------------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp HHHHHHSCHHHH-----------------------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred hcccccchhhhh-----------------------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 111000000000 001134689999999999999999999999999999876543
No 91
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=358.52 Aligned_cols=279 Identities=23% Similarity=0.318 Sum_probs=204.3
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-----CchhHHHHHHHHHHhcc---CCcceeEEEEeecc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-----GASNGFVAECQALRNIR---HRNLIKIITICSSI 748 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 748 (992)
..++|++.++||+|+||+||+|++..+++.||||++..... .....+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 35689999999999999999999988999999999974331 22356778888887775 99999999998765
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 828 (992)
........++||||+. |+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 5444556899999996 699999986543 2489999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccH
Q 037275 829 AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTL 908 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~ 908 (992)
+||+|||.++..... .......||+.|+|||++.+..++.++||||+||++|||++|++||.+..... ..
T Consensus 159 ~kl~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~ 228 (308)
T 3g33_A 159 VKLADFGLARIYSYQ---------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QL 228 (308)
T ss_dssp EEECSCSCTTTSTTC---------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HH
T ss_pred EEEeeCccccccCCC---------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HH
Confidence 999999999865432 12234568999999999999999999999999999999999999997643221 11
Q ss_pred HHHHhhh-CCh--hHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 909 HEFARTA-LPD--KVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 909 ~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
....... .+. .+..... .....+.. ...........+...++.+++.+||+.||++|||+.|+++
T Consensus 229 ~~i~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 229 GKIFDLIGLPPEDDWPRDVS-LPRGAFPP---RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHHHCCCCTTTSCSSCS-SCGGGSCC---CCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhCCCChhhccchhh-ccccccCC---CCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1111100 000 0000000 00000000 0000000000122456889999999999999999999985
No 92
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.8e-39 Score=362.71 Aligned_cols=254 Identities=20% Similarity=0.306 Sum_probs=203.3
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
..++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++. ...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~ 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EES 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCC
Confidence 45689999999999999999999998999999999975432 23456889999999999999999999864 455
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC---cEEE
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL---VAHL 831 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 831 (992)
..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTTCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 6799999999999999997543 489999999999999999999999 999999999999997654 5999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+....
T Consensus 173 ~DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------- 236 (362)
T 2bdw_A 173 ADFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------- 236 (362)
T ss_dssp CCCTTCBCCTTCC---------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------
T ss_pred eecCcceEecCCc---------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-------
Confidence 9999998665321 123356999999999999999999999999999999999999999753211
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
+.........+.. + .........++.+++.+||+.||++|||+.|+++.
T Consensus 237 ----------~~~~~i~~~~~~~------~--~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 237 ----------RLYAQIKAGAYDY------P--SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ----------HHHHHHHHTCCCC------C--TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ----------HHHHHHHhCCCCC------C--cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111111100 0 00011123458899999999999999999999864
No 93
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.7e-39 Score=352.19 Aligned_cols=254 Identities=24% Similarity=0.400 Sum_probs=201.5
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCc-------hhHHHHHHHHHHhccCCcceeEEEEeecccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGA-------SNGFVAECQALRNIRHRNLIKIITICSSIDF 750 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 750 (992)
.++|++.+.||+|+||+||+|++..+++.||+|++....... .+.+.+|+.++++++||||+++++++.+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 358999999999999999999999899999999986443222 16789999999999999999999986432
Q ss_pred cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCCeeeCCCCc
Q 037275 751 KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPP--VVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~ 828 (992)
. ++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ + |+||||||+||+++.++.
T Consensus 96 ---~--~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~ 162 (287)
T 4f0f_A 96 ---P--RMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDE 162 (287)
T ss_dssp ---T--EEEEECCTTCBHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCT
T ss_pred ---C--eEEEEecCCCCHHHHHhcccC-----CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCC
Confidence 1 699999999999999875432 589999999999999999999999 8 999999999999988776
Q ss_pred -----EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccc--cCCCcCcccchhhHHHHHHHHHhCCCCCCCC
Q 037275 829 -----AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYG--MGGEASMTGDVYSFGILLLEMFTRRRPTDGM 901 (992)
Q Consensus 829 -----~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 901 (992)
+||+|||+++.... ......||+.|+|||++ ....++.++||||+||++|||++|+.||...
T Consensus 163 ~~~~~~kl~Dfg~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 231 (287)
T 4f0f_A 163 NAPVCAKVADFGLSQQSVH-----------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231 (287)
T ss_dssp TCSCCEEECCCTTCBCCSS-----------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CCceeEEeCCCCccccccc-----------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 99999999974332 12234689999999998 3456789999999999999999999999764
Q ss_pred ccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 037275 902 FNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCR 981 (992)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 981 (992)
........... ........ . ......++.+++.+||+.||++|||++|+++.|++
T Consensus 232 ~~~~~~~~~~~---------------~~~~~~~~----~------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 232 SYGKIKFINMI---------------REEGLRPT----I------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CCCHHHHHHHH---------------HHSCCCCC----C------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred cccHHHHHHHH---------------hccCCCCC----C------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 33211111110 00000000 0 01123468899999999999999999999999986
Q ss_pred H
Q 037275 982 A 982 (992)
Q Consensus 982 ~ 982 (992)
+
T Consensus 287 l 287 (287)
T 4f0f_A 287 L 287 (287)
T ss_dssp C
T ss_pred C
Confidence 3
No 94
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-39 Score=358.54 Aligned_cols=247 Identities=26% Similarity=0.359 Sum_probs=200.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||+||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++. ...
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~~~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-----TPT 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCC
Confidence 46899999999999999999999989999999998643 2334567899999999999999999999964 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+ +|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKK------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCS
T ss_pred EEEEEEECC-CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEe
Confidence 679999999 789999987543 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
|++...... .......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||.+....... .
T Consensus 153 G~s~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-~---- 218 (336)
T 3h4j_B 153 GLSNIMTDG---------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-K---- 218 (336)
T ss_dssp SCTBTTTTS---------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-C----
T ss_pred ccceeccCC---------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-H----
Confidence 999865432 12233469999999999988876 68999999999999999999999764222100 0
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
... ... ...+ .....++.+++.+||+.||++|||++|+++
T Consensus 219 -~i~-----------~~~------~~~p------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 219 -KVN-----------SCV------YVMP------DFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp -CCC-----------SSC------CCCC------TTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred -HHH-----------cCC------CCCc------ccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 000 000 0000 011345789999999999999999999975
No 95
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.9e-39 Score=349.28 Aligned_cols=272 Identities=22% Similarity=0.273 Sum_probs=213.0
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+.+++.++|++++..++++.. .....+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA----EGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEE----ETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccC----CCCceE
Confidence 468999999999999999999998899999999986433 34568899999999999988877776532 445679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee---CCCCcEEEeec
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL---DQDLVAHLGDF 834 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Df 834 (992)
+||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 82 lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEec-CCCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 999999 8999999975432 489999999999999999999999 99999999999999 48889999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCC--ccHHHHH
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQG--LTLHEFA 912 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~--~~~~~~~ 912 (992)
|.+............ .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... .......
T Consensus 153 g~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 231 (296)
T 3uzp_A 153 GLAKKYRDARTHQHI-PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS 231 (296)
T ss_dssp TTCEECBCTTTCCBC-CCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred CCccccccccccccc-ccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhc
Confidence 999887654321111 1122345679999999999999999999999999999999999999998743221 1111111
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLG 988 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 988 (992)
....+..... . ......++.+++.+||+.||++|||++||++.|+++......
T Consensus 232 ~~~~~~~~~~-----~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 232 EKKMSTPIEV-----L------------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp HHHHHSCHHH-----H------------------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ccccCCchHH-----H------------------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 1100000000 0 001134589999999999999999999999999999876543
No 96
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.5e-39 Score=368.62 Aligned_cols=287 Identities=18% Similarity=0.171 Sum_probs=206.1
Q ss_pred hcCCCCCCccccc--cceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQG--SFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.++||+| +||+||+|++..+++.||||+++.... ...+.+.+|+.+++.++||||+++++++. ..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----AD 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE-----EC
Confidence 4589999999999 999999999998999999999975432 23466788999999999999999999964 34
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~d 171 (389)
T 3gni_B 99 NELWVVTSFMAYGSAKDLICTHFM----DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSG 171 (389)
T ss_dssp TEEEEEEECCTTCBHHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred CEEEEEEEccCCCCHHHHHhhhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcc
Confidence 567999999999999999986532 2589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccC--CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG--GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
||.+............ .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+...... ....
T Consensus 172 fg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~ 249 (389)
T 3gni_B 172 LRSNLSMISHGQRQRV-VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEK 249 (389)
T ss_dssp GGGCEECEETTEECSC-BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC
T ss_pred cccceeeccccccccc-cccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHH
Confidence 9998765432211111 1122334578999999999887 5799999999999999999999999987433322 1111
Q ss_pred HhhhCChhHHH-------H---HHh-----hHhHhhhc---cCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 037275 912 ARTALPDKVME-------I---VDS-----VLLLEVQA---SNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMR 973 (992)
Q Consensus 912 ~~~~~~~~~~~-------~---~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 973 (992)
.....+..... . ... ........ ..................++.+++.+||+.||++|||++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ 329 (389)
T 3gni_B 250 LNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSAS 329 (389)
T ss_dssp --------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred hcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHH
Confidence 11111100000 0 000 00000000 000000000001122345689999999999999999999
Q ss_pred HHHHH
Q 037275 974 DVVAK 978 (992)
Q Consensus 974 evl~~ 978 (992)
|+++.
T Consensus 330 ell~h 334 (389)
T 3gni_B 330 TLLNH 334 (389)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 99853
No 97
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=370.94 Aligned_cols=288 Identities=19% Similarity=0.236 Sum_probs=215.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.++||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.. .+....
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCCee
Confidence 357899999999999999999999899999999997433 3345678899999999999999999998753 234467
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee----CCCCcEEEe
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL----DQDLVAHLG 832 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~ 832 (992)
++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~ 158 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSN---AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLT 158 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGG---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred EEEEecCCCCCHHHHHHhhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEe
Confidence 999999999999999986542 22489999999999999999999999 99999999999999 778889999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccC--------CCcCcccchhhHHHHHHHHHhCCCCCCCCccC
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG--------GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQ 904 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 904 (992)
|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 159 DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 229 (396)
T 4eut_A 159 DFGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (396)
T ss_dssp CGGGCEECCCGG---------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT
T ss_pred cCCCceEccCCC---------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 999998765321 1223468999999998765 56788999999999999999999999764333
Q ss_pred CccHHHHHhh--hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 037275 905 GLTLHEFART--ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRA 982 (992)
Q Consensus 905 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 982 (992)
.......... ..+......+....... .......+............+.+++.+||+.||++|||++|+++.++++
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 230 RRNKEVMYKIITGKPSGAISGVQKAENGP--IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp TTCHHHHHHHHHSCCTTCCEEEECSTTCC--EEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred cchHHHHHHHhcCCCcccchhheeccCCC--cccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 2221111110 00000000000000000 0000011111122355677889999999999999999999999999887
Q ss_pred HHh
Q 037275 983 RDT 985 (992)
Q Consensus 983 ~~~ 985 (992)
.+.
T Consensus 308 l~~ 310 (396)
T 4eut_A 308 LHR 310 (396)
T ss_dssp HTC
T ss_pred hhc
Confidence 654
No 98
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=362.24 Aligned_cols=250 Identities=24% Similarity=0.339 Sum_probs=201.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++. ...
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-----~~~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ-----DEE 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eCC
Confidence 35799999999999999999999999999999999643 2345577889999999999999999999854 455
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+.+|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 159 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQNV------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDF 159 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEecc
Confidence 6799999999999999997643 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccC---CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG---GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
|+|+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+
T Consensus 160 G~a~~~~~~---------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~- 227 (384)
T 4fr4_A 160 NIAAMLPRE---------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKE- 227 (384)
T ss_dssp TTCEECCTT---------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHH-
T ss_pred ceeeeccCC---------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHH-
Confidence 999876532 12234579999999999864 458999999999999999999999997532221 111
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCC-HHHHH
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERME-MRDVV 976 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl 976 (992)
.......... ..+ .....++.+++.+||+.||++||+ +++++
T Consensus 228 -----------~~~~~~~~~~------~~p------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 228 -----------IVHTFETTVV------TYP------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp -----------HHHHHHHCCC------CCC------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred -----------HHHHHhhccc------CCC------CcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 1111100000 000 011345889999999999999999 66654
No 99
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-39 Score=366.56 Aligned_cols=259 Identities=19% Similarity=0.229 Sum_probs=206.0
Q ss_pred HHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecc
Q 037275 672 AELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSI 748 (992)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 748 (992)
.++....++|++.++||+|+||+||+|++..+++.||+|+++.. .......+.+|+.+++.++||||+++++++.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-- 139 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-- 139 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--
Confidence 44555678999999999999999999999999999999999642 2334456889999999999999999999854
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 828 (992)
+....++||||+++|+|.++++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 140 ---~~~~~~lV~E~~~gg~L~~~l~~~-------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 140 ---DDRYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp ---CSSEEEEEECCCTTEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred ---ECCEEEEEEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCC
Confidence 456779999999999999999743 388999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCC----cCcccchhhHHHHHHHHHhCCCCCCCCccC
Q 037275 829 AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGE----ASMTGDVYSFGILLLEMFTRRRPTDGMFNQ 904 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlG~il~elltg~~pf~~~~~~ 904 (992)
+||+|||+|+...... .......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+....
T Consensus 207 ikL~DFG~a~~~~~~~-------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~ 279 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEG-------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279 (410)
T ss_dssp EEECCCTTCEECCTTS-------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred EEEeccceeEeeccCC-------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh
Confidence 9999999998765421 11123457999999999987655 889999999999999999999999753211
Q ss_pred CccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 037275 905 GLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTE--RMEMRDVVA 977 (992)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 977 (992)
+....+.........+.. .....++.+++.+||..+|++ ||+++||++
T Consensus 280 -----------------~~~~~i~~~~~~~~~p~~--------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 280 -----------------GTYSKIMNHKNSLTFPDD--------NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp -----------------HHHHHHHTHHHHCCCCTT--------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred -----------------hHHHHHHhccccccCCCc--------ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 111111111111000000 011345889999999999998 999999975
No 100
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.3e-39 Score=349.20 Aligned_cols=258 Identities=25% Similarity=0.423 Sum_probs=205.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|++. ++..||+|+++.. ....+.+.+|++++++++||||+++++++. .....+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 95 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-----KQRPIF 95 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSSEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCC-CCCHHHHHHHHHHHhcCCCCCEeeEEEEEe-----cCCCeE
Confidence 457899999999999999999987 7889999999743 334577899999999999999999999963 445679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 96 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~ 167 (283)
T 3gen_A 96 IITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLS 167 (283)
T ss_dssp EEECCCTTCBHHHHHHCGGG-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGG
T ss_pred EEEeccCCCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccc
Confidence 99999999999999976432 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
+...... ........+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||......
T Consensus 168 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------------ 228 (283)
T 3gen_A 168 RYVLDDE-------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------------ 228 (283)
T ss_dssp GGBCCHH-------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------------
T ss_pred ccccccc-------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------------
Confidence 8654321 111223457889999999998899999999999999999998 99999753211
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
+....... ....... ......+.+++.+||+.||++|||++|+++.|+++.++
T Consensus 229 -----~~~~~~~~-~~~~~~~----------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 229 -----ETAEHIAQ-GLRLYRP----------HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp -----HHHHHHHT-TCCCCCC----------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----HHHHHHhc-ccCCCCC----------CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 00110000 0000000 01124588999999999999999999999999998764
No 101
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.2e-39 Score=358.27 Aligned_cols=265 Identities=25% Similarity=0.367 Sum_probs=202.5
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccc-----
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDF----- 750 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 750 (992)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3567999999999999999999999899999999997543 3345778999999999999999999998754321
Q ss_pred -----------------------------------------------cCcceEEEEEEeccCCCHHHHHhhcccchhhcc
Q 037275 751 -----------------------------------------------KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARS 783 (992)
Q Consensus 751 -----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~ 783 (992)
....+.++||||+++|+|.+++...... ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~---~~ 160 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL---ED 160 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG---GG
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc---cc
Confidence 1223479999999999999999876532 34
Q ss_pred cCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCc----ccCCCCCccc
Q 037275 784 LTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAV----ETPSSSKGIK 859 (992)
Q Consensus 784 l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~----~~~~~~~~~~ 859 (992)
.++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........... ..........
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 67778999999999999999999 9999999999999999999999999999987654211110 0012234457
Q ss_pred ccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCC
Q 037275 860 GTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRS 939 (992)
Q Consensus 860 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (992)
||+.|+|||++.+..++.++||||+||++|||++|..|+... . ..........
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~------------~~~~~~~~~~-------- 290 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------V------------RIITDVRNLK-------- 290 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------H------------HHHHHHHTTC--------
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------H------------HHHHHhhccC--------
Confidence 999999999999999999999999999999999987764210 0 0000000000
Q ss_pred CCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 940 CGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 940 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..........++.+++.+||+.||++|||++|+++
T Consensus 291 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 291 ---FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp ---CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ---CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 00011223445789999999999999999999985
No 102
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=364.79 Aligned_cols=253 Identities=19% Similarity=0.267 Sum_probs=204.0
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|.+..+++.||+|++..........+.+|+.+++.++||||+++++++. .....+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE-----DKYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-----CSSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEE-----eCCEEE
Confidence 458999999999999999999999899999999997554445567899999999999999999999964 456679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC--CCcEEEeecc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ--DLVAHLGDFG 835 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg 835 (992)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 125 lv~E~~~gg~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAED-----YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEECCCCCBHHHHTTCTT-----CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 9999999999999997543 2489999999999999999999999 9999999999999974 4789999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+....
T Consensus 197 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~----------- 256 (387)
T 1kob_A 197 LATKLNPDE---------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL----------- 256 (387)
T ss_dssp TCEECCTTS---------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----------
T ss_pred cceecCCCc---------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-----------
Confidence 998765321 112346899999999999999999999999999999999999999763211
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.+.......... .. ........++.+++.+||+.||++|||+.|+++
T Consensus 257 ------~~~~~i~~~~~~~--~~------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 257 ------ETLQNVKRCDWEF--DE------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ------HHHHHHHHCCCCC--CS------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ------HHHHHHHhCCCCC--Cc------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 0111111100000 00 000112345889999999999999999999986
No 103
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.4e-40 Score=367.01 Aligned_cols=267 Identities=23% Similarity=0.364 Sum_probs=206.8
Q ss_pred hcCCCCCCccccccceEEEEeEE-----CCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNL-----GENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
.++|++.++||+|+||+||+|+. ..+++.||||+++... ......+.+|+.++++++||||+++++++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 35789999999999999999994 4467899999986332 2334568899999999999999999999643
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccc-hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC---
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQ-QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL--- 827 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 827 (992)
....++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 146 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 221 (367)
T 3l9p_A 146 -SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 221 (367)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred -CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCc
Confidence 44559999999999999999876432 1223589999999999999999999999 999999999999999555
Q ss_pred cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCc
Q 037275 828 VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGL 906 (992)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~ 906 (992)
.+||+|||+|+...... .........||+.|+|||++.+..++.++|||||||++|||++ |..||.+....
T Consensus 222 ~~kL~DFG~a~~~~~~~------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-- 293 (367)
T 3l9p_A 222 VAKIGDFGMARDIYRAG------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-- 293 (367)
T ss_dssp CEEECCCHHHHHHHHHS------SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred eEEECCCcccccccccc------ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 59999999998653221 1112233467899999999999999999999999999999998 99999763211
Q ss_pred cHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 907 TLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
+......... ..... ......+.+++.+||+.||++|||++||++.|+.+.+..
T Consensus 294 ---------------~~~~~i~~~~-~~~~~----------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 294 ---------------EVLEFVTSGG-RMDPP----------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp ---------------HHHHHHHTTC-CCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ---------------HHHHHHHcCC-CCCCC----------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 1111111000 00000 112345889999999999999999999999999887643
No 104
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6e-39 Score=369.60 Aligned_cols=255 Identities=30% Similarity=0.392 Sum_probs=206.4
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.++||+|+||.||+|++. ++.||||+++... ..+.+.+|+.++++++||||+++++++.. .....+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEEC----TTSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEc----CCCceE
Confidence 457888999999999999999984 7899999996433 56789999999999999999999998753 334579
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 264 iv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 336 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 336 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCT----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCc
Confidence 99999999999999986542 2478999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
+..... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....+ ...
T Consensus 337 ~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~------ 397 (450)
T 1k9a_A 337 KEASST-----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP------ 397 (450)
T ss_dssp EECC-----------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHH------
T ss_pred cccccc-----------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH------
Confidence 854321 111246889999999999999999999999999999998 999998643221 111
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
.+. ..+..... .....++.+++.+||+.||++|||+.|+++.|+++....
T Consensus 398 ------~i~----~~~~~~~p----------~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 398 ------RVE----KGYKMDAP----------DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp ------HHH----TTCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ------HHH----cCCCCCCC----------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 110 00000001 112356889999999999999999999999999987654
No 105
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-39 Score=360.65 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=201.9
Q ss_pred HHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhc-cCCcceeEEEEeecccc
Q 037275 675 SKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNI-RHRNLIKIITICSSIDF 750 (992)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 750 (992)
....++|++.++||+|+||+||+|++..+++.||+|+++... ......+..|..+++.+ +||||+++++++.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~---- 88 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ---- 88 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE----
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE----
Confidence 445678999999999999999999999999999999997432 34556788899999887 9999999999854
Q ss_pred cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEE
Q 037275 751 KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAH 830 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 830 (992)
+....++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 89 -~~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vk 158 (345)
T 1xjd_A 89 -TKENLFFVMEYLNGGDLMYHIQSCH------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIK 158 (345)
T ss_dssp -CSSEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred -eCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEE
Confidence 4566799999999999999997643 489999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHH
Q 037275 831 LGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHE 910 (992)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~ 910 (992)
|+|||+|+..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+....
T Consensus 159 L~DFG~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------ 224 (345)
T 1xjd_A 159 IADFGMCKENMLG--------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE------ 224 (345)
T ss_dssp ECCCTTCBCCCCT--------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------
T ss_pred EeEChhhhhcccC--------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH------
Confidence 9999999754321 11234457999999999999999999999999999999999999999753211
Q ss_pred HHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 037275 911 FARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMR-DVV 976 (992)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 976 (992)
+.......... . .+ .....++.+++.+||+.||++||++. ||+
T Consensus 225 -----------~~~~~i~~~~~--~----~p------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 225 -----------ELFHSIRMDNP--F----YP------RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -----------HHHHHHHHCCC--C----CC------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -----------HHHHHHHhCCC--C----CC------cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11111111110 0 00 01134588999999999999999997 654
No 106
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-39 Score=352.87 Aligned_cols=246 Identities=25% Similarity=0.317 Sum_probs=202.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||+||+|+...+|+.||+|+++.. .....+.+.+|+.+++.++||||+++++++. +..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ-----DAQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE-----CSS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE-----eCC
Confidence 45799999999999999999999989999999999743 2344567889999999999999999999854 456
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQ------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeec
Confidence 7799999999999999997643 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+....
T Consensus 151 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---------- 209 (318)
T 1fot_A 151 GFAKYVPDV-----------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM---------- 209 (318)
T ss_dssp SSCEECSSC-----------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH----------
T ss_pred CcceecCCc-----------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH----------
Confidence 999865431 12346899999999999999999999999999999999999999753211
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM-----EMRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 977 (992)
+........... .+ .....++.+++.+||+.||++|| +++|+++
T Consensus 210 -------~~~~~i~~~~~~------~p------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 210 -------KTYEKILNAELR------FP------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -------HHHHHHHHCCCC------CC------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -------HHHHHHHhCCCC------CC------CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 111111111100 00 01134588999999999999999 8888874
No 107
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-39 Score=376.03 Aligned_cols=205 Identities=23% Similarity=0.361 Sum_probs=160.2
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
++|++.++||+|+||+||+|++..+++.||||++..... ...+.+.+|+.++++++||||+++++++...........
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 689999999999999999999998999999999864322 234678899999999999999999999876655666788
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+ +|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEecc-ccchhhhcccCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 9999998 579999997543 589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCc-------------------ccCCCCCcccccccccccccc-cCCCcCcccchhhHHHHHHHHHh
Q 037275 837 AKFLSSSPLDTAV-------------------ETPSSSKGIKGTVGYIAPEYG-MGGEASMTGDVYSFGILLLEMFT 893 (992)
Q Consensus 837 a~~~~~~~~~~~~-------------------~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~ellt 893 (992)
|+........... .........+||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 9876532211000 001123456789999999976 56679999999999999999999
No 108
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.3e-39 Score=359.74 Aligned_cols=259 Identities=23% Similarity=0.400 Sum_probs=200.5
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeE----EEEEEeecc-CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMM----VAVKVINLK-QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
++|++.++||+|+||+||+|++..+++. ||+|.++.. .....+.+.+|+.++++++||||+++++++...
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 89 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----
Confidence 4789999999999999999998767665 577777533 234557899999999999999999999997542
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
..++|+||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 90 -~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~D 160 (327)
T 3poz_A 90 -TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp -SEEEEEECCTTCBHHHHHHHSTT-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred -CeEEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEcc
Confidence 25799999999999999986543 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 912 (992)
||+|+....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.....
T Consensus 161 fg~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------- 227 (327)
T 3poz_A 161 FGLAKLLGAEEK------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------- 227 (327)
T ss_dssp TTHHHHHTTTCC-------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-------
T ss_pred CcceeEccCCcc------cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-------
Confidence 999987654321 112223457889999999999999999999999999999999 999997642221
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
....+... .... .......++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 228 -------~~~~~~~~----~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 228 -------ISSILEKG----ERLP----------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -------HHHHHHTT----CCCC----------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -------HHHHHHcC----CCCC----------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 11111110 0000 0011234588999999999999999999999999988754
No 109
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.4e-39 Score=360.54 Aligned_cols=254 Identities=22% Similarity=0.290 Sum_probs=193.4
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|++..+++.||||++.... ...+.+.+|+.+++.++||||+++++++. .....+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVIL-----TPTHLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEe-----eCCEEE
Confidence 458999999999999999999999999999999996433 34467889999999999999999999964 445679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc--EEEeecc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV--AHLGDFG 835 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg 835 (992)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 93 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAG------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 9999999999999997543 489999999999999999999999 9999999999999987765 9999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcc-cchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMT-GDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
+|+..... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||.+...... .
T Consensus 164 ~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~------ 227 (361)
T 3uc3_A 164 YSKSSVLH---------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-Y------ 227 (361)
T ss_dssp CC------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-H------
T ss_pred cccccccc---------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-H------
Confidence 99743221 12233469999999999988877655 8999999999999999999986433221 1
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
...+.......+.. +.. .....++.+++.+||+.||++|||+.|+++.
T Consensus 228 ------~~~~~~~~~~~~~~------~~~----~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 228 ------RKTIQRILSVKYSI------PDD----IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ------HHHHHHHHTTCCCC------CTT----SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ------HHHHHHHhcCCCCC------CCc----CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 11111111111100 000 0113457899999999999999999999864
No 110
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.9e-39 Score=358.74 Aligned_cols=280 Identities=21% Similarity=0.271 Sum_probs=212.2
Q ss_pred cCCCCCCccccccceEEEEeE----ECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGN----LGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
++|++.+.||+|+||.||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++.. .+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCCc
Confidence 578999999999999999999 456889999999976555556778999999999999999999998653 3456
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHRA-----RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCG
T ss_pred eEEEEEeecCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccc
Confidence 67999999999999999986543 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|.++....... .........||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ...+...
T Consensus 172 g~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~--~~~~~~~ 244 (327)
T 3lxl_A 172 GLAKLLPLDKD-----YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGCE 244 (327)
T ss_dssp GGCEECCTTCS-----EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH--HHHCC--
T ss_pred ccceecccCCc-----cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh--hhhcccc
Confidence 99987654321 1112233458889999999998899999999999999999999999986521110 0000000
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
.............. ...... ........+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 245 ~~~~~~~~~~~~~~-~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 245 RDVPALSRLLELLE-EGQRLP----------APPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp --CCHHHHHHHHHH-TTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred cccccHHHHHHHhh-cccCCC----------CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 00111111111111 110000 011224568999999999999999999999999998876543
No 111
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.4e-39 Score=352.80 Aligned_cols=275 Identities=23% Similarity=0.366 Sum_probs=207.9
Q ss_pred cCCCCCCccccccceEEEEeE----ECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGN----LGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.+|++.+.||+|+||.||+|+ ...+++.||+|+++... ....+.+.+|+.++++++||||+++++++.. .+.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCC
Confidence 468899999999999999999 45689999999997443 3345778999999999999999999999754 233
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ceEEEEEEeCCCCcHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECc
Confidence 557899999999999999975442 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||.+........ .........||..|+|||++.+..++.++||||+||++|+|++|+.|+..... .......
T Consensus 170 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~ 241 (302)
T 4e5w_A 170 FGLTKAIETDKE-----YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA---LFLKMIG 241 (302)
T ss_dssp CTTCEECCTTCC-----EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH---HHHHHHC
T ss_pred ccccccccCCCc-----ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh---HHhhccC
Confidence 999987754321 11222344688899999999999999999999999999999999998643110 0001111
Q ss_pred hhCChh-HHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 037275 914 TALPDK-VMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRAR 983 (992)
Q Consensus 914 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 983 (992)
...... ....... ....... .. ......++.+++.+||+.||++|||++|+++.|+++.
T Consensus 242 ~~~~~~~~~~~~~~-~~~~~~~----~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 242 PTHGQMTVTRLVNT-LKEGKRL----PC------PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp SCCGGGHHHHHHHH-HHTTCCC----CC------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccccCHHHHHHH-HhccCCC----CC------CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111 1111111 1111100 00 0122356899999999999999999999999999875
No 112
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.2e-39 Score=356.37 Aligned_cols=259 Identities=23% Similarity=0.363 Sum_probs=203.0
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeE----EEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMM----VAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
++|++.++||+|+||+||+|++..+++. ||+|++.... ......+.+|+.++++++||||+++++++. .
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------G 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------B
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------C
Confidence 4788999999999999999999777765 7777764332 334456789999999999999999999863 2
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQHRG-----ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSSGG-----GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECS
T ss_pred CccEEEEEeCCCCCHHHHHHHccc-----cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECC
Confidence 346899999999999999986532 488999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 912 (992)
||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....
T Consensus 159 fg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-------- 224 (325)
T 3kex_A 159 FGVADLLPPDDK------QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-------- 224 (325)
T ss_dssp CSGGGGSCCCTT------CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--------
T ss_pred CCcccccCcccc------cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--------
Confidence 999987654321 112233467889999999998999999999999999999999 99999864221
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
.....+.. . ........ ...++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 225 ------~~~~~~~~---~-~~~~~~~~----------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 225 ------EVPDLLEK---G-ERLAQPQI----------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ------HHHHHHHT---T-CBCCCCTT----------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ------HHHHHHHc---C-CCCCCCCc----------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11111110 0 00000011 122478899999999999999999999999987643
No 113
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.9e-39 Score=356.76 Aligned_cols=269 Identities=22% Similarity=0.389 Sum_probs=212.0
Q ss_pred hcCCCCCCccccccceEEEEeEE-----CCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhc-cCCcceeEEEEeecccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNL-----GENGMMVAVKVINLKQK-GASNGFVAECQALRNI-RHRNLIKIITICSSIDF 750 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 750 (992)
.++|++.+.||+|+||+||+|++ ..+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~--- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI--- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec---
Confidence 46899999999999999999985 45678999999974433 2346789999999999 99999999999643
Q ss_pred cCcceEEEEEEeccCCCHHHHHhhcccc------------hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCC
Q 037275 751 KGVDFQAIVYEYMQNGSLEDWLHQSEDQ------------QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKP 818 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 818 (992)
....++||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+||||||
T Consensus 99 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp 173 (313)
T 1t46_A 99 --GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAA 173 (313)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred --CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCcc
Confidence 44569999999999999999865421 1123589999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCC
Q 037275 819 SNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRP 897 (992)
Q Consensus 819 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p 897 (992)
+||+++.++.+||+|||.++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 247 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDSN------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCTT------SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred ceEEEcCCCCEEEcccccccccccccc------ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999987654321 111223457889999999988899999999999999999999 9999
Q ss_pred CCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 898 TDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 898 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
|.+..... .....+.. ...... ......++.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~-------------~~~~~~~~----~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 248 YPGMPVDS-------------KFYKMIKE----GFRMLS----------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp STTCCSSH-------------HHHHHHHH----TCCCCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcccchh-------------HHHHHhcc----CCCCCC----------cccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 97643221 11111111 000000 0112345889999999999999999999999
Q ss_pred HHHHHHHhhh
Q 037275 978 KLCRARDTFL 987 (992)
Q Consensus 978 ~L~~~~~~~~ 987 (992)
.|+++.+...
T Consensus 301 ~L~~~~~~~~ 310 (313)
T 1t46_A 301 LIEKQISEST 310 (313)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhh
Confidence 9999887654
No 114
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.6e-39 Score=372.86 Aligned_cols=278 Identities=18% Similarity=0.222 Sum_probs=200.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc--CCCchhHHHHHHHHHHhccCCcceeEEEEeecccc-cCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK--QKGASNGFVAECQALRNIRHRNLIKIITICSSIDF-KGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 754 (992)
.++|++.++||+|+||+||+|.+..+++.||||++... .....+.+.+|+.+++.++||||+++++++..... ....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999999999999999999643 23345678899999999999999999999765332 3446
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~--------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCC-CHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEE
Confidence 77999999976 56666642 388999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+|+..... .......||+.|+|||++.+..|+.++||||+||++|||++|+.||.+....+ .+......
T Consensus 209 G~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~ 278 (464)
T 3ttj_A 209 GLARTAGTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQ 278 (464)
T ss_dssp CCC-----C---------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred EeeeecCCC---------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh
Confidence 999865432 12234578999999999999999999999999999999999999998743211 11111111
Q ss_pred hC-C-hhHHHHHHhhHhHhhhccCCC------------CCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 AL-P-DKVMEIVDSVLLLEVQASNSR------------SCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~~-~-~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.. + ......+.............. ..............++.+++.+||+.||++|||++|+++
T Consensus 279 lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 10 0 000000000000000000000 000011111223567899999999999999999999986
No 115
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=355.34 Aligned_cols=277 Identities=21% Similarity=0.323 Sum_probs=199.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC--chhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG--ASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||+||+|++..+|+.||+|++...... ..+.+.+|+.++++++||||+++++++. ....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-----RKRR 76 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-----cCCe
Confidence 35899999999999999999999989999999998644332 2456789999999999999999999964 3456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 77 ~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 147 (311)
T 4agu_A 77 LHLVFEYCDHTVLHELDRYQR------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFG 147 (311)
T ss_dssp EEEEEECCSEEHHHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEEeCCCchHHHHHhhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCC
Confidence 799999999999999887543 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
.+....... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+....+. .......
T Consensus 148 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~ 218 (311)
T 4agu_A 148 FARLLTGPS--------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKT 218 (311)
T ss_dssp TCEECC--------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH
T ss_pred CchhccCcc--------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH
Confidence 998765321 11223468999999999876 5789999999999999999999999986432211 1111111
Q ss_pred --hCChhHHHHHHhh-HhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 --ALPDKVMEIVDSV-LLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 --~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
............. ..........................+.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 219 LGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred hcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 1111111111110 00000000000000000001123456889999999999999999999985
No 116
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.4e-39 Score=355.84 Aligned_cols=275 Identities=24% Similarity=0.410 Sum_probs=203.7
Q ss_pred HHhcCCCCCCccccccceEEEEeEECC---CCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccc
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGE---NGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDF 750 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 750 (992)
...++|.+.+.||+|+||.||+|.... +++.||+|+++.... ...+.+.+|+.++++++||||+++++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 345678899999999999999998754 456899999875432 234668999999999999999999999876544
Q ss_pred cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEE
Q 037275 751 KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAH 830 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 830 (992)
.+....++||||+++|+|.+++...........+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 44456799999999999999997554333345699999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHH
Q 037275 831 LGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLH 909 (992)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~ 909 (992)
|+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+..... ..
T Consensus 188 l~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~ 259 (313)
T 3brb_A 188 VADFGLSKKIYSGDY------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MY 259 (313)
T ss_dssp ECSCSCC----------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HH
T ss_pred EeecCcceecccccc------cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HH
Confidence 999999987643221 111223457889999999999999999999999999999999 889987642221 00
Q ss_pred HHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 910 EFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
........ .. ........+.+++.+||+.||++|||+.|+++.|+++.+.+.
T Consensus 260 ---------------~~~~~~~~-~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 260 ---------------DYLLHGHR-LK----------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp ---------------HHHHTTCC-CC----------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ---------------HHHHcCCC-CC----------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 00000000 00 001123468899999999999999999999999999987653
No 117
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=362.06 Aligned_cols=248 Identities=22% Similarity=0.297 Sum_probs=195.4
Q ss_pred CCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEEEEEEe
Q 037275 683 SSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQAIVYEY 762 (992)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 762 (992)
..+.||+|+||.||+|++..+|+.||+|+++.......+.+.+|++++++++||||+++++++. .....++||||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~~lv~E~ 167 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE-----SKNDIVLVMEY 167 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSEEEEEEEC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEE-----ECCEEEEEEeC
Confidence 3568999999999999999899999999997655555678999999999999999999999964 34567999999
Q ss_pred ccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee--CCCCcEEEeecccceec
Q 037275 763 MQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL--DQDLVAHLGDFGLAKFL 840 (992)
Q Consensus 763 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~Dfg~a~~~ 840 (992)
+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 168 ~~~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~ 239 (373)
T 2x4f_A 168 VDGGELFDRIIDESY-----NLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239 (373)
T ss_dssp CTTCEEHHHHHHTGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEEC
T ss_pred CCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceec
Confidence 999999999875432 489999999999999999999999 99999999999999 67789999999999876
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCChhH
Q 037275 841 SSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALPDKV 920 (992)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 920 (992)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 240 ~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---------------- 294 (373)
T 2x4f_A 240 KPRE---------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA---------------- 294 (373)
T ss_dssp CTTC---------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH----------------
T ss_pred CCcc---------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH----------------
Confidence 5322 122346899999999999999999999999999999999999999764221
Q ss_pred HHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 921 MEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.+.......... . .........++.+++.+||+.||++|||++|+++
T Consensus 295 -~~~~~i~~~~~~~------~--~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 295 -ETLNNILACRWDL------E--DEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -HHHHHHHHTCCCS------C--SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -HHHHHHHhccCCC------C--hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111111110000 0 0000112356889999999999999999999987
No 118
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-39 Score=358.94 Aligned_cols=271 Identities=21% Similarity=0.357 Sum_probs=206.9
Q ss_pred HhcCCCCCCccccccceEEEEeEE-----CCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhc-cCCcceeEEEEeeccc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNL-----GENGMMVAVKVINLKQ-KGASNGFVAECQALRNI-RHRNLIKIITICSSID 749 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 749 (992)
..++|++.+.||+|+||+||+|++ ..+++.||||++.... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-- 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee--
Confidence 356899999999999999999997 3456789999996432 33457789999999999 89999999999643
Q ss_pred ccCcceEEEEEEeccCCCHHHHHhhcccc-----------------hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 037275 750 FKGVDFQAIVYEYMQNGSLEDWLHQSEDQ-----------------QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVV 812 (992)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~iv 812 (992)
....++||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+
T Consensus 121 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 121 ---SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp ---SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ---CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 44569999999999999999865421 0113489999999999999999999999 999
Q ss_pred eccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHH
Q 037275 813 HGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMF 892 (992)
Q Consensus 813 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell 892 (992)
||||||+||+++.++.+||+|||++........ ........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 268 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSN------YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCcc------ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHH
Confidence 999999999999999999999999986643221 11123345788999999998889999999999999999999
Q ss_pred h-CCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCC
Q 037275 893 T-RRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERME 971 (992)
Q Consensus 893 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 971 (992)
| |..||.+..... . ....+.. ....... .....++.+++.+||+.||++|||
T Consensus 269 t~g~~p~~~~~~~~-~------------~~~~~~~----~~~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 269 SLGVNPYPGIPVDA-N------------FYKLIQN----GFKMDQP----------FYATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp TTSCCSSTTCCCSH-H------------HHHHHHT----TCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred cCCCCCcccCCcHH-H------------HHHHHhc----CCCCCCC----------CCCCHHHHHHHHHHcCCCchhCcC
Confidence 8 999997643221 1 1111110 0000000 111345889999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh
Q 037275 972 MRDVVAKLCRARDTFLG 988 (992)
Q Consensus 972 ~~evl~~L~~~~~~~~~ 988 (992)
+.|+++.|+.+.+....
T Consensus 322 ~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 322 FPNLTSFLGCQLADAEE 338 (344)
T ss_dssp HHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998766543
No 119
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.4e-39 Score=355.40 Aligned_cols=253 Identities=22% Similarity=0.281 Sum_probs=198.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC---CchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK---GASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|..+++++ +||||+++++++. ..
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~-----~~ 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TE 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CS
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE-----eC
Confidence 3578999999999999999999999999999999975432 2345678899999988 8999999999853 45
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~D 153 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 153 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEe
Confidence 67799999999999999997543 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...........
T Consensus 154 FG~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---- 221 (345)
T 3a8x_A 154 YGMCKEGLRP--------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ---- 221 (345)
T ss_dssp GGGCBCSCCT--------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC----------
T ss_pred ccccccccCC--------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc----
Confidence 9999853321 1123345799999999999999999999999999999999999999975322110000
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM 972 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 972 (992)
............... ..+ .....++.+++.+||+.||++||++
T Consensus 222 ----~~~~~~~~~i~~~~~------~~p------~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 222 ----NTEDYLFQVILEKQI------RIP------RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----CHHHHHHHHHHCCC------CCC------TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----ccHHHHHHHHHcCCC------CCC------CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 000011111111110 000 0123458899999999999999996
No 120
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-39 Score=352.87 Aligned_cols=272 Identities=22% Similarity=0.322 Sum_probs=196.7
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
++|++.+.||+|+||+||+|++ .+++.||+|++.... ......+.+|+.++++++||||+++++++. .....
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-----TKKRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-----CSSCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc-----cCCeE
Confidence 5789999999999999999999 478999999986443 223467889999999999999999999964 34567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+++ +|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 146 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCEG-----GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGL 146 (288)
T ss_dssp EEEEECCSE-EHHHHHHTSTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred EEEEEecCC-CHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcc
Confidence 999999975 99999876432 489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+ .........
T Consensus 147 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~ 217 (288)
T 1ob3_A 147 ARAFGIPV--------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRIL 217 (288)
T ss_dssp HHHHCC-----------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred ccccCccc--------cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHH
Confidence 98664321 112234689999999998764 58999999999999999999999998643221 111111100
Q ss_pred C---ChhHHHHHHhhHhHhhhccCCCCC-CccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 L---PDKVMEIVDSVLLLEVQASNSRSC-GDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
. ...+... .. ...+........ ............++.+++.+||+.||++|||++|+++
T Consensus 218 ~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 218 GTPNSKNWPNV-TE--LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCTTTSTTG-GG--STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCChhhchhh-hc--ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0000000 00 000000000000 0000000112356789999999999999999999975
No 121
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=360.86 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=187.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|++..+++.||||+++... ..+.+.+|++++++++||||+++++++. .....+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~ 124 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFE-----TPTEIS 124 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEE-----CSSEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEe-----cCCeEE
Confidence 467999999999999999999999899999999996432 3456889999999999999999999964 345679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC---CCcEEEeec
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ---DLVAHLGDF 834 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Df 834 (992)
+||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 125 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEKG------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp EEECCCCSCBHHHHHTTCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccC
Confidence 9999999999999997543 489999999999999999999999 9999999999999975 889999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..........
T Consensus 196 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~---- 262 (349)
T 2w4o_A 196 GLSKIVEHQV---------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR---- 262 (349)
T ss_dssp C-------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH----
T ss_pred ccccccCccc---------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH----
Confidence 9998654321 122346899999999999999999999999999999999999999753221111111
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
........ . .....+...++.+++.+||+.||++|||+.|+++
T Consensus 263 ------------i~~~~~~~--~------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 263 ------------ILNCEYYF--I------SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ------------HHTTCCCC--C------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ------------HHhCCCcc--C------CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11000000 0 0000112346889999999999999999999986
No 122
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=363.83 Aligned_cols=272 Identities=23% Similarity=0.403 Sum_probs=209.8
Q ss_pred HHhcCCCCCCccccccceEEEEeEEC-----CCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeeccc
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLG-----ENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSID 749 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 749 (992)
...++|++.+.||+|+||.||+|++. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++..
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 121 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-- 121 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc--
Confidence 34678999999999999999999986 3458999999974432 234678999999999999999999999643
Q ss_pred ccCcceEEEEEEeccCCCHHHHHhhcccch------------------hhcccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 037275 750 FKGVDFQAIVYEYMQNGSLEDWLHQSEDQQ------------------EARSLTLIQRINIIIDVASAIEYIHHHCQPPV 811 (992)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 811 (992)
....++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||++ +|
T Consensus 122 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i 195 (343)
T 1luf_A 122 ---GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF 195 (343)
T ss_dssp ---SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred ---CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 455699999999999999998753210 124689999999999999999999999 99
Q ss_pred EeccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHH
Q 037275 812 VHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEM 891 (992)
Q Consensus 812 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 891 (992)
+||||||+||+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||
T Consensus 196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el 269 (343)
T 1luf_A 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269 (343)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC------BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ecCCCCcceEEECCCCeEEEeecCCCcccccCcc------ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHH
Confidence 9999999999999999999999999986643211 1122334578999999999988999999999999999999
Q ss_pred Hh-CCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC
Q 037275 892 FT-RRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM 970 (992)
Q Consensus 892 lt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 970 (992)
++ |+.||.+.... +.......... ...+ ......+.+++.+||+.||++||
T Consensus 270 ~t~g~~p~~~~~~~-----------------~~~~~~~~~~~-----~~~~------~~~~~~l~~li~~~l~~~p~~Rp 321 (343)
T 1luf_A 270 FSYGLQPYYGMAHE-----------------EVIYYVRDGNI-----LACP------ENCPLELYNLMRLCWSKLPADRP 321 (343)
T ss_dssp HTTTCCTTTTSCHH-----------------HHHHHHHTTCC-----CCCC------TTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HhcCCCcCCCCChH-----------------HHHHHHhCCCc-----CCCC------CCCCHHHHHHHHHHcccCcccCC
Confidence 99 99999753211 11111110000 0000 11234588999999999999999
Q ss_pred CHHHHHHHHHHHHHhhhhc
Q 037275 971 EMRDVVAKLCRARDTFLGR 989 (992)
Q Consensus 971 s~~evl~~L~~~~~~~~~~ 989 (992)
|+.|+++.|+++.+.+.+.
T Consensus 322 s~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 322 SFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp CHHHHHHHHHHTTC-----
T ss_pred CHHHHHHHHHHHHhhhhhh
Confidence 9999999999998776543
No 123
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.3e-39 Score=363.46 Aligned_cols=210 Identities=26% Similarity=0.337 Sum_probs=179.6
Q ss_pred CcccHHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-----CCcceeE
Q 037275 667 PMISYAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR-----HRNLIKI 741 (992)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~ 741 (992)
..+++.+-....++|++.++||+|+||+||+|++..+++.||||+++. .......+..|+.+++.+. ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 344555555567799999999999999999999998999999999863 2233456788999999996 9999999
Q ss_pred EEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCe
Q 037275 742 ITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNV 821 (992)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 821 (992)
++++.. ....++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||
T Consensus 102 ~~~~~~-----~~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 168 (360)
T 3llt_A 102 HGKFMY-----YDHMCLIFEPL-GPSLYEIITRNNY----NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENI 168 (360)
T ss_dssp EEEEEE-----TTEEEEEECCC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cceeeE-----CCeeEEEEcCC-CCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccE
Confidence 998653 45679999999 8999999986542 2589999999999999999999999 999999999999
Q ss_pred eeCC-------------------------CCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcC
Q 037275 822 LLDQ-------------------------DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEAS 876 (992)
Q Consensus 822 ll~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 876 (992)
+++. ++.+||+|||+|+..... .....||+.|+|||++.+..++
T Consensus 169 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~ 237 (360)
T 3llt_A 169 LLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----------HGSIINTRQYRAPEVILNLGWD 237 (360)
T ss_dssp EESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----------CCSCCSCGGGCCHHHHTTCCCC
T ss_pred EEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----------CcCccCcccccCcHHHcCCCCC
Confidence 9975 789999999999864421 1234689999999999999999
Q ss_pred cccchhhHHHHHHHHHhCCCCCCCC
Q 037275 877 MTGDVYSFGILLLEMFTRRRPTDGM 901 (992)
Q Consensus 877 ~~~DiwSlG~il~elltg~~pf~~~ 901 (992)
.++||||+||++|||++|+.||.+.
T Consensus 238 ~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 238 VSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CccchHHHHHHHHHHHHCCCCCCCC
Confidence 9999999999999999999999864
No 124
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=361.24 Aligned_cols=272 Identities=19% Similarity=0.259 Sum_probs=202.3
Q ss_pred cCCCCCCccccccceEEEEeEECC---CCeEEEEEEeeccCCC-----------chhHHHHHHHHHHhccCCcceeEEEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGE---NGMMVAVKVINLKQKG-----------ASNGFVAECQALRNIRHRNLIKIITI 744 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~~ 744 (992)
++|++.+.||+|+||+||+|++.. ++..||+|++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 579999999999999999999976 7889999998644321 12346678888999999999999998
Q ss_pred eecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC
Q 037275 745 CSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD 824 (992)
Q Consensus 745 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 824 (992)
+... +.+....++||||+ +++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 117 ~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 117 GLTE-FKGRSYRFMVMERL-GIDLQKISGQNG------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccc-cCCCcEEEEEEecc-CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc
Confidence 7652 24467789999999 999999997543 589999999999999999999999 999999999999998
Q ss_pred CCC--cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCc
Q 037275 825 QDL--VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMF 902 (992)
Q Consensus 825 ~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 902 (992)
.++ .+||+|||+|+.+......... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 264 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQY-QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL 264 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCC-CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT
T ss_pred cCCCCcEEEEeCCCceecccccccccc-hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 887 9999999999876532211110 1111234579999999999999999999999999999999999999996532
Q ss_pred cCCccHHHHHh---hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 037275 903 NQGLTLHEFAR---TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKL 979 (992)
Q Consensus 903 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 979 (992)
........... ...+....... .......++.+++.+||+.||++|||++||++.|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 323 (345)
T 2v62_A 265 KDPVAVQTAKTNLLDELPQSVLKWA---------------------PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323 (345)
T ss_dssp TCHHHHHHHHHHHHHTTTHHHHHHS---------------------CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred cccHHHHHHHHhhcccccHHHHhhc---------------------cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 22111111111 01111110000 0001234689999999999999999999999999
Q ss_pred HHHH
Q 037275 980 CRAR 983 (992)
Q Consensus 980 ~~~~ 983 (992)
+++.
T Consensus 324 ~~~~ 327 (345)
T 2v62_A 324 NPHG 327 (345)
T ss_dssp CTTC
T ss_pred hccC
Confidence 8753
No 125
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.1e-39 Score=356.00 Aligned_cols=246 Identities=21% Similarity=0.256 Sum_probs=202.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||.||+|++..+|+.||+|++... .....+.+.+|+.+++.++||||+++++++. +..
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK-----DNS 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----cCC
Confidence 35899999999999999999999989999999999643 2344567889999999999999999999854 456
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIG------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccc
Confidence 7799999999999999998643 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 186 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---------- 244 (350)
T 1rdq_E 186 GFAKRVKGR-----------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---------- 244 (350)
T ss_dssp TTCEECSSC-----------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------
T ss_pred ccceeccCC-----------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH----------
Confidence 999875432 12346999999999999999999999999999999999999999753111
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERME-----MRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 977 (992)
+........... .+ .....++.+++.+||+.||++||+ ++||++
T Consensus 245 -------~~~~~i~~~~~~------~p------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 245 -------QIYEKIVSGKVR------FP------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -------HHHHHHHHCCCC------CC------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -------HHHHHHHcCCCC------CC------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 111111111100 00 011345889999999999999998 888764
No 126
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=360.44 Aligned_cols=267 Identities=23% Similarity=0.356 Sum_probs=210.1
Q ss_pred hcCCCCCCccccccceEEEEeEECC-------CCeEEEEEEeeccCC-CchhHHHHHHHHHHhc-cCCcceeEEEEeecc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGE-------NGMMVAVKVINLKQK-GASNGFVAECQALRNI-RHRNLIKIITICSSI 748 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 748 (992)
.++|.+.++||+|+||+||+|++.. .+..||||+++.... .....+.+|+++++++ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~- 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-
Confidence 4588999999999999999999742 346899999964432 2346789999999999 99999999999643
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccc----------hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCC
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQ----------QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKP 818 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 818 (992)
....++||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+||||||
T Consensus 147 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 147 ----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp ----SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred ----CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 44569999999999999999875421 1123589999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCC
Q 037275 819 SNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRP 897 (992)
Q Consensus 819 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p 897 (992)
+||+++.++.+||+|||+|+....... ........+|+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p 293 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDY------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCT------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ceEEEcCCCcEEEcccCcccccccccc------cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999987654321 112233457889999999999999999999999999999999 9999
Q ss_pred CCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 898 TDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 898 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
|.+.... ++....... ...... .....++.+++.+||+.||++|||++||++
T Consensus 294 ~~~~~~~-----------------~~~~~~~~~-~~~~~~----------~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 345 (382)
T 3tt0_A 294 YPGVPVE-----------------ELFKLLKEG-HRMDKP----------SNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345 (382)
T ss_dssp STTCCHH-----------------HHHHHHHTT-CCCCCC----------SSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHH-----------------HHHHHHHcC-CCCCCC----------ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9753211 111111100 000000 112345889999999999999999999999
Q ss_pred HHHHHHHhh
Q 037275 978 KLCRARDTF 986 (992)
Q Consensus 978 ~L~~~~~~~ 986 (992)
.|+++.+..
T Consensus 346 ~L~~~~~~~ 354 (382)
T 3tt0_A 346 DLDRIVALT 354 (382)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHH
Confidence 999997654
No 127
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.1e-38 Score=350.97 Aligned_cols=275 Identities=20% Similarity=0.257 Sum_probs=200.1
Q ss_pred hcCCCCC-CccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSS-NMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++. ++||+|+||+||+|++..+++.||||++..........+.+|+++++++ +||||+++++++. ....
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~-----~~~~ 85 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE-----EEDR 85 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe-----eCCE
Confidence 3468775 7899999999999999889999999999766666677899999999985 7999999999964 3456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc---EEEe
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV---AHLG 832 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 832 (992)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~ 156 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHKRR------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKIC 156 (316)
T ss_dssp EEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEEC
T ss_pred EEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEE
Confidence 799999999999999997643 589999999999999999999999 9999999999999988775 9999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccC-----CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCcc
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-----GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLT 907 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~ 907 (992)
|||++............ .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+..
T Consensus 157 Dfg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 235 (316)
T 2ac3_A 157 DFDLGSGIKLNGDCSPI-STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235 (316)
T ss_dssp CTTCCC--------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC
T ss_pred EccCccccccCCccccc-cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc
Confidence 99999865432111100 1112233469999999999875 56889999999999999999999999875433211
Q ss_pred HHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 908 LHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.... ...+.....+......... ..+. ........++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~--~~~~~~~~~~~~~i~~~~~------~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 236 WDRG--EACPACQNMLFESIQEGKY------EFPD--KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp C------CCHHHHHHHHHHHHHCCC------CCCH--HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccc--ccchhHHHHHHHHHhccCc------ccCc--hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1100 0000001111111111100 0000 000112356889999999999999999999986
No 128
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.5e-39 Score=356.87 Aligned_cols=250 Identities=24% Similarity=0.306 Sum_probs=201.6
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccC
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKG 752 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 752 (992)
..++|++.++||+|+||+||+|++..+++.||+|+++.. .....+.+.+|..++..+ +||+|+++++++ ..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~ 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE-----EC
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE-----Ec
Confidence 356899999999999999999999988999999999743 234556788999999988 899999999985 34
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEe
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLG 832 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 832 (992)
....++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred CCEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEE
Confidence 567799999999999999997543 489999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
|||+|+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 164 DFG~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-------- 227 (353)
T 2i0e_A 164 DFGMCKENIWD--------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-------- 227 (353)
T ss_dssp CCTTCBCCCCT--------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------
T ss_pred eCCcccccccC--------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--------
Confidence 99999854321 11233457999999999999999999999999999999999999999753211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERME-----MRDVVA 977 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 977 (992)
++.......... .+ .....++.+++.+||+.||++||+ ++||++
T Consensus 228 ---------~~~~~i~~~~~~------~p------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 228 ---------ELFQSIMEHNVA------YP------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ---------HHHHHHHHCCCC------CC------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ---------HHHHHHHhCCCC------CC------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 111111111110 00 012345889999999999999996 466654
No 129
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.9e-39 Score=350.53 Aligned_cols=261 Identities=22% Similarity=0.324 Sum_probs=197.2
Q ss_pred hcCCCCCCccccccceEEEEeEECC---CCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGE---NGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.+.||+|+||.||+|.+.. .+..||+|+++.... ...+.+.+|+.++++++||||+++++++. .
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------E 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------S
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------c
Confidence 4588999999999999999999854 356799999864332 23467899999999999999999999863 2
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRKY-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CccEEEEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECc
Confidence 345899999999999999975432 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 912 (992)
||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+ ....
T Consensus 160 fg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~- 229 (281)
T 1mp8_A 160 FGLSRYMEDSTY-------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGR- 229 (281)
T ss_dssp --------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH-
T ss_pred cccccccCcccc-------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHH-
Confidence 999987654221 11122346789999999988899999999999999999997 999997643221 1000
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
+ ..... .. ........+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 230 -----------i---~~~~~-~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 230 -----------I---ENGER-LP----------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp -----------H---HTTCC-CC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----------H---HcCCC-CC----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 0 00000 00 001123458899999999999999999999999999877643
No 130
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=363.51 Aligned_cols=263 Identities=23% Similarity=0.269 Sum_probs=205.1
Q ss_pred cHHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEee
Q 037275 670 SYAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICS 746 (992)
Q Consensus 670 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 746 (992)
.+.+.....++|++.++||+|+||+||+|+...+|+.||+|+++... ......+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556789999999999999999999999899999999996422 233456889999999999999999999854
Q ss_pred cccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC
Q 037275 747 SIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD 826 (992)
Q Consensus 747 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 826 (992)
+....++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 132 -----~~~~~~lVmE~~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~ 198 (412)
T 2vd5_A 132 -----DENYLYLVMEYYVGGDLLTLLSKFGE-----RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRC 198 (412)
T ss_dssp -----CSSEEEEEECCCCSCBHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred -----eCCEEEEEEcCCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCC
Confidence 45677999999999999999986432 489999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCCCCCcccCCCCCccccccccccccccc-------CCCcCcccchhhHHHHHHHHHhCCCCCC
Q 037275 827 LVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM-------GGEASMTGDVYSFGILLLEMFTRRRPTD 899 (992)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwSlG~il~elltg~~pf~ 899 (992)
+.+||+|||+|+....... ......+||+.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 199 g~vkL~DFGla~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 271 (412)
T 2vd5_A 199 GHIRLADFGSCLKLRADGT-------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271 (412)
T ss_dssp SCEEECCCTTCEECCTTSC-------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred CCEEEeechhheeccCCCc-------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCC
Confidence 9999999999987653211 1122357999999999987 4578999999999999999999999997
Q ss_pred CCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCC---CCHHHHH
Q 037275 900 GMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTER---MEMRDVV 976 (992)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl 976 (992)
+.... +....+........... .......++.+++.+||. +|++| |+++|++
T Consensus 272 ~~~~~-----------------~~~~~i~~~~~~~~~p~-------~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~ 326 (412)
T 2vd5_A 272 ADSTA-----------------ETYGKIVHYKEHLSLPL-------VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFR 326 (412)
T ss_dssp CSSHH-----------------HHHHHHHTHHHHCCCC-----------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHH
T ss_pred CCCHH-----------------HHHHHHHhcccCcCCCc-------cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHh
Confidence 63211 11111111000000000 001123468899999999 99998 5898886
Q ss_pred H
Q 037275 977 A 977 (992)
Q Consensus 977 ~ 977 (992)
+
T Consensus 327 ~ 327 (412)
T 2vd5_A 327 T 327 (412)
T ss_dssp T
T ss_pred c
Confidence 4
No 131
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.2e-39 Score=375.96 Aligned_cols=258 Identities=24% Similarity=0.445 Sum_probs=209.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
..+|++.++||+|+||.||+|++..++..||||+++.. ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEec-----CCcEE
Confidence 34688899999999999999999888999999999643 3356789999999999999999999999743 34569
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 293 lv~E~~~~g~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred EEEEccCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 99999999999999986432 2589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
+....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....
T Consensus 366 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~------------ 426 (495)
T 1opk_A 366 RLMTGDTY-------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------ 426 (495)
T ss_dssp ECCTTCCE-------ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------------
T ss_pred eeccCCce-------eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH------------
Confidence 87653321 11223456789999999998999999999999999999999 99999764321
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRAR 983 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 983 (992)
...+.+.. ....... .....++.+++.+||+.||++|||+.||++.|+.+.
T Consensus 427 --~~~~~~~~----~~~~~~~----------~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 427 --QVYELLEK----DYRMERP----------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp --GHHHHHHT----TCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --HHHHHHHc----CCCCCCC----------CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11111111 1100000 112346889999999999999999999999998764
No 132
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.2e-38 Score=343.65 Aligned_cols=252 Identities=21% Similarity=0.234 Sum_probs=204.0
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
..++|++.+.||+|+||+||+|++..++..||+|++........+.+.+|++++++++||||+++++++. .....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE-----DNTDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCeE
Confidence 3457999999999999999999999899999999998766667788999999999999999999999964 45567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee---CCCCcEEEee
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL---DQDLVAHLGD 833 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 833 (992)
++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~D 152 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHKR------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLID 152 (277)
T ss_dssp EEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEe
Confidence 99999999999999987643 489999999999999999999999 99999999999999 7889999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||.+....... ......||+.|+|||++.+. ++.++||||+|+++|+|++|+.||....... .......
T Consensus 153 fg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~ 221 (277)
T 3f3z_A 153 FGLAARFKPGK---------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIRE 221 (277)
T ss_dssp CTTCEECCTTS---------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred cccceeccCcc---------chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHh
Confidence 99998765322 22334689999999987654 8999999999999999999999997632210 0000000
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
...... ..........+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~~~~------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 222 GTFTFP------------------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CCCCCC------------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCCC------------------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 0000012356889999999999999999999985
No 133
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.8e-39 Score=373.09 Aligned_cols=262 Identities=26% Similarity=0.428 Sum_probs=209.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|++. ++..||||+++... ...+.+.+|+.++++++||||+++++++. ....+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~~~ 258 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPIY 258 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSCE
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCccE
Confidence 457888999999999999999996 57889999997433 45678999999999999999999999863 23468
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.++++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 259 lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a 331 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 331 (454)
T ss_dssp EEECCCTTCBHHHHHHSHHH----HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGG
T ss_pred EEEeecCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCc
Confidence 99999999999999986532 2588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
+...... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....
T Consensus 332 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~------------ 392 (454)
T 1qcf_A 332 RVIEDNE-------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP------------ 392 (454)
T ss_dssp GGBCCHH-------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------------
T ss_pred eEcCCCc-------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH------------
Confidence 8764321 111123346889999999998899999999999999999999 99999763211
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhc
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGR 989 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 989 (992)
++..... ........ .....++.+++.+||+.||++|||+++|++.|+++......+
T Consensus 393 -----~~~~~i~-~~~~~~~~----------~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~ 449 (454)
T 1qcf_A 393 -----EVIRALE-RGYRMPRP----------ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQ 449 (454)
T ss_dssp -----HHHHHHH-HTCCCCCC----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCCS
T ss_pred -----HHHHHHH-cCCCCCCC----------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccccc
Confidence 1111111 11110001 112356889999999999999999999999999886654443
No 134
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=355.28 Aligned_cols=281 Identities=22% Similarity=0.359 Sum_probs=213.3
Q ss_pred hcCCCCCCccccccceEEEEeEE----CCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNL----GENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++.. .+.
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---cCC
Confidence 45688999999999999999984 55799999999976655566789999999999999999999998753 223
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~D 188 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 188 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred CceEEEEECCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEec
Confidence 456899999999999999986542 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||++......... ........++..|+|||++.+..++.++|||||||++|||++|..||...... ......
T Consensus 189 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~ 260 (326)
T 2w1i_A 189 FGLTKVLPQDKEY-----YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIG 260 (326)
T ss_dssp CTTCEECCSSCSE-----EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHC
T ss_pred Ccchhhccccccc-----cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhc
Confidence 9999876543211 11122335778899999998888999999999999999999999987642110 111111
Q ss_pred hhCC-hhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 914 TALP-DKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 914 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
.... ......+........... .......++.+++.+||+.||++|||+.||++.|+++++.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 261 NDKQGQMIVFHLIELLKNNGRLP----------RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp TTCCTHHHHHHHHHHHHTTCCCC----------CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred cccchhhhHHHHHHHhhcCCCCC----------CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1111 001101111111100000 011223568999999999999999999999999999998765
No 135
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.6e-39 Score=356.48 Aligned_cols=266 Identities=22% Similarity=0.362 Sum_probs=198.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCc---hhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGA---SNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||.||+|++..+++.||||+++...... ...+.+|+.++++++||||+++++++.... ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 458999999999999999999998899999999997543222 356889999999999999999999875432 2234
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred ccEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 5699999999999999997543 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+++....... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+..............
T Consensus 161 g~a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 235 (311)
T 3ork_A 161 GIARAIADSGN-----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235 (311)
T ss_dssp SCC-----------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC
T ss_pred cCccccccccc-----ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC
Confidence 99987654221 1122234568999999999999999999999999999999999999997632211000000000
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH-HHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVV-AKLCRAR 983 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl-~~L~~~~ 983 (992)
..+. .........++.+++.+||+.||++||++.+++ +.+.+..
T Consensus 236 ~~~~-------------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 236 PIPP-------------------------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp CCCH-------------------------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CCCc-------------------------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 0000 000011234588999999999999999766654 4555443
No 136
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.4e-39 Score=354.93 Aligned_cols=266 Identities=22% Similarity=0.357 Sum_probs=209.8
Q ss_pred hcCCCCCCccccccceEEEEeEE-----CCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNL-----GENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
.++|.+.+.||+|+||.||+|++ ..+++.||||+++... ....+.+.+|+.++++++||||+++++++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----- 96 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----- 96 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe-----
Confidence 56889999999999999999987 3456899999996433 233467889999999999999999999964
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccch------------------hhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQ------------------EARSLTLIQRINIIIDVASAIEYIHHHCQPPVVH 813 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH 813 (992)
.....++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||++ +|+|
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 3445699999999999999998754310 123589999999999999999999999 9999
Q ss_pred ccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh
Q 037275 814 GDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT 893 (992)
Q Consensus 814 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 893 (992)
|||||+||+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++||||+||++|||++
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 247 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDS------YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSC------EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred cccchheEEEcCCCCEEEcccccccccccccc------ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHh
Confidence 99999999999999999999999987654321 111223457889999999998899999999999999999999
Q ss_pred -CCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 037275 894 -RRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM 972 (992)
Q Consensus 894 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 972 (992)
|+.||.+.... .....+.. ...... .......+.+++.+||+.||++|||+
T Consensus 248 ~g~~p~~~~~~~--------------~~~~~~~~----~~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~ 299 (314)
T 2ivs_A 248 LGGNPYPGIPPE--------------RLFNLLKT----GHRMER----------PDNCSEEMYRLMLQCWKQEPDKRPVF 299 (314)
T ss_dssp TSCCSSTTCCGG--------------GHHHHHHT----TCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCCCCCHH--------------HHHHHhhc----CCcCCC----------CccCCHHHHHHHHHHccCChhhCcCH
Confidence 99999764321 11111110 000000 01123458899999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 037275 973 RDVVAKLCRARDT 985 (992)
Q Consensus 973 ~evl~~L~~~~~~ 985 (992)
.|+++.|+++.+.
T Consensus 300 ~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 300 ADISKDLEKMMVK 312 (314)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998764
No 137
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.4e-39 Score=345.84 Aligned_cols=254 Identities=24% Similarity=0.380 Sum_probs=191.5
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC----CchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK----GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.++||+|+||.||+|++ .++.||||+++.... ...+.+.+|+++++.++||||+++++++.. .
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-----E 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-----C
T ss_pred hhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-----C
Confidence 35789999999999999999998 488999999864322 234678999999999999999999999643 4
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC--------
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ-------- 825 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------- 825 (992)
...++||||+++++|.+++... .+++..++.++.|++.||+|||++...+|+||||||+||+++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~ 151 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSGK-------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS 151 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCS
T ss_pred CceEEEEEcCCCCCHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccccc
Confidence 4569999999999999998632 4899999999999999999999991112999999999999986
Q ss_pred CCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCC
Q 037275 826 DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQG 905 (992)
Q Consensus 826 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~ 905 (992)
++.+||+|||.+....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.+.....
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 221 (271)
T 3dtc_A 152 NKILKITDFGLAREWHRTT----------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA 221 (271)
T ss_dssp SCCEEECCCCC-----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH
T ss_pred CcceEEccCCccccccccc----------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 7789999999998654321 123458999999999998899999999999999999999999997632110
Q ss_pred ccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 037275 906 LTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRA 982 (992)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 982 (992)
............ . ........+.+++.+||+.||++|||+.|+++.|+++
T Consensus 222 -----------------~~~~~~~~~~~~----~------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 222 -----------------VAYGVAMNKLAL----P------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -----------------HHHHHHTSCCCC----C------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -----------------HHHhhhcCCCCC----C------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 000000000000 0 0011234588999999999999999999999999764
No 138
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=351.68 Aligned_cols=257 Identities=26% Similarity=0.425 Sum_probs=198.1
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQAI 758 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 758 (992)
++|++.+.||+|+||+||+|++ .++.||||++. .....+.+.+|+.++++++||||+++++++.+ ..++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~l 76 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACLN-------PVCL 76 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECS--STTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------TTEE
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEec--ChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------CcEE
Confidence 5788999999999999999998 47899999985 33456778999999999999999999998642 2489
Q ss_pred EEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc-EEEeecccc
Q 037275 759 VYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV-AHLGDFGLA 837 (992)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a 837 (992)
||||+++|+|.+++..... ...+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++
T Consensus 77 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~ 153 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153 (307)
T ss_dssp EEECCTTCBHHHHHHCSSS---EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-
T ss_pred EEEcCCCCCHHHHHhccCC---CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccc
Confidence 9999999999999986542 234788999999999999999999931128999999999999988886 799999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALP 917 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~ 917 (992)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 154 ~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---------- 212 (307)
T 2eva_A 154 CDIQTH-----------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR---------- 212 (307)
T ss_dssp ----------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH----------
T ss_pred cccccc-----------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH----------
Confidence 754321 12235899999999999999999999999999999999999999754222100
Q ss_pred hhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 918 DKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
.......... ... .......+.+++.+||+.||++|||++|+++.|+++.+.+
T Consensus 213 -----~~~~~~~~~~-~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 213 -----IMWAVHNGTR-PPL----------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp -----HHHHHHTTCC-CCC----------BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred -----HHHHHhcCCC-CCc----------ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 0000000000 000 0112345889999999999999999999999999987654
No 139
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.6e-39 Score=349.09 Aligned_cols=262 Identities=24% Similarity=0.434 Sum_probs=212.2
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
..++|++.+.||+|+||+||+|.+..+++.||+|++.. .....+.+.+|+.++++++||||+++++++. .....
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 84 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPF 84 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS-CSTHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCCE
Confidence 45688999999999999999999998899999999863 3345677899999999999999999999964 44567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+++++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred EEEEEcCCCCcHHHHHHhccc----CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcc
Confidence 999999999999999986543 3589999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~ 915 (992)
+....... ........+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.+....
T Consensus 158 ~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~----------- 219 (288)
T 3kfa_A 158 SRLMTGDT-------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----------- 219 (288)
T ss_dssp GGTSCSSS-------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----------
T ss_pred ceeccCCc-------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----------
Confidence 98665322 111223457889999999998899999999999999999999 99999763221
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
...+.+.. ....... ......+.+++.+||+.||++|||++|+++.|+++....
T Consensus 220 ---~~~~~~~~----~~~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 220 ---QVYELLEK----DYRMERP----------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ---GHHHHHHT----TCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHhc----cCCCCCC----------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 11111111 0000000 112345889999999999999999999999999887653
No 140
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=369.68 Aligned_cols=331 Identities=22% Similarity=0.240 Sum_probs=238.5
Q ss_pred ccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhc
Q 037275 172 TLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIV 251 (992)
Q Consensus 172 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l 251 (992)
+|++|+|++|.+.+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~------------------ 94 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL------------------ 94 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCS------------------
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCc------------------
Confidence 45555555555544445555555555555555555555445555555555555555555441
Q ss_pred cccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCC
Q 037275 252 AENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDD 331 (992)
Q Consensus 252 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~ 331 (992)
..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+
T Consensus 95 -------~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l--------------------------- 140 (477)
T 2id5_A 95 -------IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL--------------------------- 140 (477)
T ss_dssp -------CCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTC---------------------------
T ss_pred -------cCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCcc---------------------------
Confidence 1122344455555555555555555454555555555544444443
Q ss_pred CcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccC
Q 037275 332 NRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGI 411 (992)
Q Consensus 332 n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 411 (992)
+++.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++.+..
T Consensus 141 ----------------------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 141 ----------------------------VYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp ----------------------------CEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred ----------------------------ceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 3344556677778888888888887666667888888888888888888777
Q ss_pred CCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCC
Q 037275 412 PTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNL 491 (992)
Q Consensus 412 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l 491 (992)
+..|..+++|+.|++++|.+.+.+|.......+|++| ++++|.+++..+..+..+
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L-------------------------~l~~n~l~~~~~~~~~~l 247 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSL-------------------------SITHCNLTAVPYLAVRHL 247 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEE-------------------------EEESSCCCSCCHHHHTTC
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEE-------------------------ECcCCcccccCHHHhcCc
Confidence 7788888888888888887766666665555566666 445555554444568889
Q ss_pred CCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEec
Q 037275 492 KNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNL 571 (992)
Q Consensus 492 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 571 (992)
++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|++
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 327 (477)
T 2id5_A 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLIL 327 (477)
T ss_dssp TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEEC
T ss_pred cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEc
Confidence 99999999999999888888999999999999999999999999999999999999999999888888999999999999
Q ss_pred CCCcCcccCCCCCccCCcccccccCCCCcCCCCCCC
Q 037275 572 SYNHFEGEVPTKGVFSNKTGISLSGNGKVCGGLDEL 607 (992)
Q Consensus 572 ~~N~l~~~~~~~~~~~~~~~~~l~~N~~~C~~~~~~ 607 (992)
++|+|.|.|+..+.+.+.....+.++...|++|..+
T Consensus 328 ~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~~ 363 (477)
T 2id5_A 328 DSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFV 363 (477)
T ss_dssp CSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGGG
T ss_pred cCCCccCccchHhHHhhhhccccCccCceeCCchHH
Confidence 999999999877666666667788999999887643
No 141
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.7e-39 Score=367.42 Aligned_cols=212 Identities=24% Similarity=0.332 Sum_probs=172.0
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.++||+|+||+||+|++..+++.||||++..... ...+.+.+|+.++++++||||+++++++..........
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 3589999999999999999999999999999999964322 23467889999999999999999999987655555567
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||++ |+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCC-cCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 899999996 59999997543 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcc--------------cCCCCCcccccccccccccc-cCCCcCcccchhhHHHHHHHHHhCCCCCC
Q 037275 836 LAKFLSSSPLDTAVE--------------TPSSSKGIKGTVGYIAPEYG-MGGEASMTGDVYSFGILLLEMFTRRRPTD 899 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~--------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlG~il~elltg~~pf~ 899 (992)
+|+............ ........+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 999875432110000 00123456799999999985 56679999999999999999998655554
No 142
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-39 Score=352.22 Aligned_cols=261 Identities=28% Similarity=0.427 Sum_probs=193.9
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.++||+|+||+||+|++. ..||+|+++.... ...+.+.+|+.++++++||||+++++++. ...
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~ 93 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST------APQ 93 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc------CCc
Confidence 458999999999999999999874 3599999965433 23467899999999999999999999742 234
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 165 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHASET-----KFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFG 165 (289)
T ss_dssp CEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred cEEEEEecCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccce
Confidence 5899999999999999975543 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCccccccccccccccc---CCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM---GGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
+++...... .........||+.|+|||++. +..++.++|||||||++|+|++|+.||........
T Consensus 166 ~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------ 233 (289)
T 3og7_A 166 LATEKSRWS------GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ------ 233 (289)
T ss_dssp ------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH------
T ss_pred ecccccccc------ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH------
Confidence 998654321 111223356899999999886 56788899999999999999999999976432211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARD 984 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 984 (992)
....+.. ..... ... ........++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 234 -------~~~~~~~---~~~~~-~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 234 -------IIEMVGR---GSLSP-DLS------KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -------HHHHHHH---TSCCC-CTT------SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -------HHHHhcc---cccCc-chh------hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 1111110 00000 000 0011223568999999999999999999999999998753
No 143
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.3e-39 Score=353.24 Aligned_cols=251 Identities=22% Similarity=0.264 Sum_probs=179.2
Q ss_pred CCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-CCcceeEEEEeecccccCcceEEEEEEe
Q 037275 684 SNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR-HRNLIKIITICSSIDFKGVDFQAIVYEY 762 (992)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~ 762 (992)
.+.||+|+||+||+|++..+++.||||++... ....+.+|+.+++.+. ||||+++++++. +....++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~-----~~~~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFH-----DQLHTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSSEEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEE-----cCCEEEEEEEc
Confidence 47899999999999999989999999998633 3466789999999997 999999999964 45567999999
Q ss_pred ccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC---cEEEeeccccee
Q 037275 763 MQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL---VAHLGDFGLAKF 839 (992)
Q Consensus 763 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~ 839 (992)
+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++.
T Consensus 88 ~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 88 LNGGELFERIKKKK------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp CCSCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 99999999998643 589999999999999999999999 999999999999997766 899999999986
Q ss_pred cCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCChh
Q 037275 840 LSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALPDK 919 (992)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 919 (992)
..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+...... ...
T Consensus 159 ~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------~~~ 220 (325)
T 3kn6_A 159 KPPDN--------QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT----------CTS 220 (325)
T ss_dssp CCC------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------------CCC
T ss_pred cCCCC--------CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc----------ccc
Confidence 54321 122334689999999999999999999999999999999999999986432110 001
Q ss_pred HHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 920 VMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..+.......+.+. ...........++.+++.+||+.||++|||++|+++
T Consensus 221 ~~~~~~~i~~~~~~--------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 221 AVEIMKKIKKGDFS--------FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHHHTTTCCC--------CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHHHHHHcCCCC--------CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 11122211111110 000011123456889999999999999999999873
No 144
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.2e-38 Score=349.09 Aligned_cols=252 Identities=23% Similarity=0.320 Sum_probs=202.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC------chhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG------ASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
.++|++.+.||+|+||.||+|++..+|+.||+|++...... ..+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 85 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE----- 85 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe-----
Confidence 45799999999999999999999989999999999754322 3567899999999999999999999964
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC----
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL---- 827 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 827 (992)
.....++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 86 NRTDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHTCS------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred cCCEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcC
Confidence 4456799999999999999997543 488999999999999999999999 999999999999999888
Q ss_pred cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCcc
Q 037275 828 VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLT 907 (992)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~ 907 (992)
.+||+|||.+....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..... .
T Consensus 157 ~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~ 226 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-T 226 (321)
T ss_dssp CEEECCCTTCEECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-H
T ss_pred CEEEccCccceecCccc---------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-H
Confidence 79999999998765421 1223468999999999999999999999999999999999999997632110 0
Q ss_pred HHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 908 LHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
........... ... ........+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~i~~~~~~~-~~~-----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 227 LANITSVSYDF-DEE-----------------------FFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHTTCCCC-CHH-----------------------HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHhccccc-Chh-----------------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000000000 000 00112345889999999999999999999986
No 145
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-39 Score=362.35 Aligned_cols=281 Identities=21% Similarity=0.245 Sum_probs=200.5
Q ss_pred HHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccc----
Q 037275 675 SKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDF---- 750 (992)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 750 (992)
....++|++.++||+|+||+||+|++..+|+.||||++..... ...+|+++++.++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3456789999999999999999999998999999999864322 22379999999999999999999754322
Q ss_pred -----------------------------cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHH
Q 037275 751 -----------------------------KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIE 801 (992)
Q Consensus 751 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~ 801 (992)
.+..+.++||||++ |+|.+.+...... ...+++..++.++.|+++||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS--GRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHH
Confidence 34456789999997 5888888753321 346899999999999999999
Q ss_pred HHHhcCCCCeEeccCCCCCeeeC-CCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCccc
Q 037275 802 YIHHHCQPPVVHGDLKPSNVLLD-QDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTG 879 (992)
Q Consensus 802 ~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~ 879 (992)
|||++ +|+||||||+||+++ .++.+||+|||.|+...... ......||+.|+|||++.+. .++.++
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~ 223 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---------PSVAYICSRFYRAPELMLGATEYTPSI 223 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---------CCCCCCCCSSCCCHHHHTTCSSCCTHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---------CCcCcccCCCccCHHHhcCCCCCCcch
Confidence 99999 999999999999997 68899999999998764322 12334689999999988775 589999
Q ss_pred chhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCcc---ccchHHHHHHHHH
Q 037275 880 DVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDE---RLRTEERLVAVVE 956 (992)
Q Consensus 880 DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~ 956 (992)
||||+||++|||++|+.||.+....+ .+..............+... ...+........... .........++.+
T Consensus 224 DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (383)
T 3eb0_A 224 DLWSIGCVFGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRM--NPHYTEVRFPTLKAKDWRKILPEGTPSLAID 300 (383)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHH--CTTC--CCCCCCCCCCHHHHSCTTCCHHHHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHh--CcccccccCCccCcccHHhhCCCCCCHHHHH
Confidence 99999999999999999998743221 12222221111111111100 000000000000000 0001113456899
Q ss_pred HHhhccCCCCCCCCCHHHHHH
Q 037275 957 TGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 957 li~~cl~~dP~~RPs~~evl~ 977 (992)
++.+||+.||++|||+.|+++
T Consensus 301 li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 301 LLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhhCCCHHHHhc
Confidence 999999999999999999984
No 146
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=7.7e-39 Score=344.06 Aligned_cols=255 Identities=23% Similarity=0.358 Sum_probs=202.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||+||+|++ .++.||||+++.... ...+.+.+|+.++++++||||+++++++... ....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCCC
Confidence 35899999999999999999999 488999999975432 2345789999999999999999999997542 2356
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCCeeeCCCCcEEEee
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPP--VVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
.++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ + |+||||||+||+++.++.++|+|
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~ 156 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISM 156 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred eEeeecccCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEe
Confidence 6999999999999999986542 2589999999999999999999998 7 99999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCc---ccchhhHHHHHHHHHhCCCCCCCCccCCccHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASM---TGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHE 910 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~ 910 (992)
||++..... ....||+.|+|||++.+..++. ++|||||||++|||++|+.||.+.....
T Consensus 157 ~~~~~~~~~-------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----- 218 (271)
T 3kmu_A 157 ADVKFSFQS-------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME----- 218 (271)
T ss_dssp GGSCCTTSC-------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-----
T ss_pred ccceeeecc-------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-----
Confidence 998754221 2235899999999988765554 7999999999999999999997532210
Q ss_pred HHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 037275 911 FARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARD 984 (992)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 984 (992)
............ ..+ .....++.+++.+||+.||++|||++|+++.|+++.+
T Consensus 219 ------------~~~~~~~~~~~~----~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 219 ------------IGMKVALEGLRP----TIP------PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ------------HHHHHHHSCCCC----CCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ------------HHHHHHhcCCCC----CCC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 001111000000 000 1123458899999999999999999999999998754
No 147
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.9e-39 Score=342.33 Aligned_cols=258 Identities=25% Similarity=0.421 Sum_probs=207.4
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ...+.+.+|++++++++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCCeE
Confidence 357889999999999999999996 68899999997443 345678999999999999999999999643 44569
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 80 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 151 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 151 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEeCCCCCcHHHHHhhCcc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccc
Confidence 99999999999999976532 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
....... ........+++.|+|||++.+..++.++||||+|+++|+|++ |+.||......
T Consensus 152 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------------ 212 (267)
T 3t9t_A 152 RFVLDDQ-------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------------ 212 (267)
T ss_dssp GGBCCHH-------HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------------
T ss_pred ccccccc-------ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH------------
Confidence 8654321 111223457889999999988899999999999999999999 89998753211
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
+........ ...... ......+.+++.+||+.||++|||++|+++.|+++.++
T Consensus 213 -----~~~~~i~~~-~~~~~~----------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 213 -----EVVEDISTG-FRLYKP----------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -----HHHHHHHTT-CCCCCC----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----HHHHHHhcC-CcCCCC----------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111111000 000000 01134588999999999999999999999999998764
No 148
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2e-38 Score=342.24 Aligned_cols=263 Identities=26% Similarity=0.450 Sum_probs=208.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||.||+|++. ++..||+|++... ....+.+.+|++++++++||||+++++++.. ...+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 83 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EPIY 83 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCC-cccHHHHHHHHHHHHhCCCcCcceEEEEEcC------CCcE
Confidence 457899999999999999999986 6788999998643 3346789999999999999999999998642 2358
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||++++++.+||+|||.+
T Consensus 84 ~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 156 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLA 156 (279)
T ss_dssp EEEECCTTCBHHHHTTSHHH----HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccc
Confidence 99999999999999975432 2589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
........ .......+++.|+|||++.+..++.++||||||+++|||++ |+.||.+.... +
T Consensus 157 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~------ 218 (279)
T 1qpc_A 157 RLIEDNEY-------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----E------ 218 (279)
T ss_dssp EECSSSCE-------ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----H------
T ss_pred ccccCccc-------ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----H------
Confidence 87654321 11223456889999999988899999999999999999999 99999753211 0
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhcc
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGRM 990 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 990 (992)
....... ...... ......++.+++.+||+.||++|||++++++.|+++.....++.
T Consensus 219 ------~~~~~~~-~~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 275 (279)
T 1qpc_A 219 ------VIQNLER-GYRMVR----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQY 275 (279)
T ss_dssp ------HHHHHHT-TCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC----
T ss_pred ------HHHHHhc-ccCCCC----------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCCC
Confidence 1111000 000000 01123468899999999999999999999999999988766554
No 149
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.7e-38 Score=348.54 Aligned_cols=267 Identities=24% Similarity=0.343 Sum_probs=200.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.++++++||||+++++++.. ..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DN 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TT
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CC
Confidence 457999999999999999999998899999999997432 2234668899999999999999999999653 44
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKKQ--KRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred cEEEEEecCCCCCHHHHHHHhccc--ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEec
Confidence 679999999999999999764321 34589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|++....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||.+..... .
T Consensus 181 g~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~----- 244 (310)
T 2wqm_A 181 GLGRFFSSKT--------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---Y----- 244 (310)
T ss_dssp --------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH---H-----
T ss_pred cceeeecCCC--------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH---H-----
Confidence 9998654321 11223468999999999999999999999999999999999999997532111 0
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
............. . .......++.+++.+||+.||++|||++||++.|+++.+...
T Consensus 245 -------~~~~~~~~~~~~~-----~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 245 -------SLCKKIEQCDYPP-----L-----PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp -------HHHHHHHTTCSCC-----C-----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -------HHHHHhhcccCCC-----C-----cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 1111111000000 0 001123458899999999999999999999999999987654
No 150
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.8e-39 Score=350.12 Aligned_cols=268 Identities=25% Similarity=0.395 Sum_probs=206.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCC---CeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGEN---GMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
..+|++.++||+|+||+||+|++..+ ...||+|.+..... ...+.+.+|+.++++++||||+++++++.. ..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~ 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SE 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc----CC
Confidence 45688899999999999999997533 34689998864332 334678999999999999999999998643 34
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 171 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVAD 171 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECS
T ss_pred CceEEEEeCCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECc
Confidence 556899999999999999975432 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 912 (992)
||.++........ .........+|+.|+|||.+.+..++.++||||+|+++|+|++ |.+||.+..... ......
T Consensus 172 fg~a~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~~ 246 (298)
T 3f66_A 172 FGLARDMYDKEYY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLL 246 (298)
T ss_dssp CGGGCCCSCGGGC----BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-HHHHHH
T ss_pred ccccccccccchh----ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHHh
Confidence 9999876543211 1122334567889999999999999999999999999999999 566665432221 111110
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhc
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGR 989 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 989 (992)
... . ... .......+.+++.+||+.||++|||++|+++.|+++.+.+.++
T Consensus 247 ~~~----------------~-~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 247 QGR----------------R-LLQ----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp TTC----------------C-CCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred cCC----------------C-CCC----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 000 0 000 0011245889999999999999999999999999999887664
No 151
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.6e-39 Score=352.80 Aligned_cols=253 Identities=19% Similarity=0.357 Sum_probs=200.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCC-------eEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENG-------MMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDF 750 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 750 (992)
.++|++.+.||+|+||+||+|++..++ ..||+|++........+.+.+|+.++++++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC--- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC---
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe---
Confidence 357889999999999999999987665 5799999976666667889999999999999999999999643
Q ss_pred cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc--
Q 037275 751 KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV-- 828 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-- 828 (992)
....++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 84 --~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 153 (289)
T 4fvq_A 84 --GDENILVQEFVKFGSLDTYLKKNKN-----CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRK 153 (289)
T ss_dssp --TTCCEEEEECCTTCBHHHHHHHTGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGG
T ss_pred --CCCCEEEEECCCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccc
Confidence 3455899999999999999986543 389999999999999999999999 9999999999999998886
Q ss_pred ------EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCC
Q 037275 829 ------AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGM 901 (992)
Q Consensus 829 ------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~ 901 (992)
+||+|||.+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|..|+...
T Consensus 154 ~~~~~~~kl~Dfg~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (289)
T 4fvq_A 154 TGNPPFIKLSDPGISITVLP------------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221 (289)
T ss_dssp GTBCCEEEECCCCSCTTTSC------------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccccceeeeccCcccccccC------------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence 99999999864432 122357889999999887 67899999999999999999955444321
Q ss_pred ccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 037275 902 FNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCR 981 (992)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 981 (992)
.+.. . ...... .. ....... ..++.+++.+||+.||++|||++|+++.|++
T Consensus 222 ~~~~----~---------~~~~~~----~~--~~~~~~~----------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 222 LDSQ----R---------KLQFYE----DR--HQLPAPK----------AAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp SCHH----H---------HHHHHH----TT--CCCCCCS----------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred cchH----H---------HHHHhh----cc--CCCCCCC----------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1110 0 000000 00 0000001 2247889999999999999999999999998
Q ss_pred HHH
Q 037275 982 ARD 984 (992)
Q Consensus 982 ~~~ 984 (992)
+..
T Consensus 273 l~~ 275 (289)
T 4fvq_A 273 LFT 275 (289)
T ss_dssp CC-
T ss_pred hcC
Confidence 754
No 152
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=349.38 Aligned_cols=245 Identities=24% Similarity=0.303 Sum_probs=191.1
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC--chhHHHHHHHHHHhc-cCCcceeEEEEeecccccCcce
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG--ASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 755 (992)
++|++.++||+|+||+||+|++..+++.||||++...... .......|+..+.++ +||||+++++++. ....
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-----~~~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-----EGGI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-----eCCE
Confidence 5799999999999999999999989999999998643322 223445566665555 8999999999964 3456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWGA-----SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred EEEEEecc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence 79999999 7799999876542 599999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.+.. .........
T Consensus 203 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~~~~ 268 (311)
T 3p1a_A 203 LLVELGTAG---------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQQLRQGY 268 (311)
T ss_dssp TCEECC---------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHHHHTTTC
T ss_pred eeeecccCC---------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHhccC
Confidence 998765321 1223458999999998876 78999999999999999999977664310 111111111
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.+... ......++.+++.+||+.||++|||++|+++
T Consensus 269 ~~~~~--------------------------~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 269 LPPEF--------------------------TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CCHHH--------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCccc--------------------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11000 0112345899999999999999999999985
No 153
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.9e-38 Score=359.16 Aligned_cols=258 Identities=20% Similarity=0.271 Sum_probs=194.6
Q ss_pred hcCCCCC-CccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHh-ccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSS-NMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRN-IRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|.+. ++||+|+||+||+|.+..+++.||||+++. ...+.+|+.++.+ .+||||+++++++... +.+...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 3466666 689999999999999999999999999852 3457788888754 5899999999987531 234567
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC---CCcEEEe
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ---DLVAHLG 832 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 832 (992)
.++||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEeCCCCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 8999999999999999986532 2589999999999999999999999 9999999999999987 7899999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.......
T Consensus 207 DFG~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----- 272 (400)
T 1nxk_A 207 DFGFAKETTSH---------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----- 272 (400)
T ss_dssp CCTTCEECC--------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-----
T ss_pred ecccccccCCC---------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-----
Confidence 99999865432 1123456899999999999999999999999999999999999999764332110
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
...... .....+.... ........++.+++.+||+.||++|||++|+++.
T Consensus 273 -----~~~~~~---i~~~~~~~~~--------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 273 -----PGMKTR---IRMGQYEFPN--------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -----CSHHHH---HHHTCCCCCT--------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----HHHHHH---HHcCcccCCC--------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000000 0001110000 0001123458899999999999999999999874
No 154
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=357.48 Aligned_cols=277 Identities=21% Similarity=0.257 Sum_probs=198.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeeccc-ccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSID-FKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 754 (992)
.++|++.+.||+|+||.||+|.+..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 3579999999999999999999998999999999854322 23456889999999999999999999976532 12234
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+ +++|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEee
Confidence 569999999 88999999752 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
|+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ .+.....
T Consensus 173 g~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~ 240 (367)
T 1cm8_A 173 GLARQADSE-----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMK 240 (367)
T ss_dssp TTCEECCSS-----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred ecccccccc-----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 999875421 223468999999999877 679999999999999999999999998643221 1111111
Q ss_pred hh--CChhHHHHHHhhHhHhhhccCCCCCC-ccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TA--LPDKVMEIVDSVLLLEVQASNSRSCG-DERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.. .+......+.......+......... .-..........+.+++.+||+.||++|||++|+++
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 241 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 11 11111111100000000000000000 000001122456889999999999999999999986
No 155
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-38 Score=350.91 Aligned_cols=276 Identities=25% Similarity=0.374 Sum_probs=208.9
Q ss_pred CCCCCccccccceEEEEeEE----CCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 681 FSSSNMIGQGSFGFVYKGNL----GENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
|++.++||+|+||+||+|.+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++.. .+...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED---AGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---TTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec---CCCce
Confidence 48999999999999987754 45789999999975432 234668999999999999999999999754 23456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH-------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred EEEEEecccCCcHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcc
Confidence 79999999999999999753 389999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
.+........ .........+|+.|+|||++.+..++.++||||+||++|+|++|+.||...... ... ...
T Consensus 180 ~a~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~---~~~--~~~ 249 (318)
T 3lxp_A 180 LAKAVPEGHE-----YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK---FLE--LIG 249 (318)
T ss_dssp GCEECCTTCS-----EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHH--HHC
T ss_pred cccccccccc-----ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh---hhh--hhc
Confidence 9987754321 111223345788999999999989999999999999999999999998652111 000 001
Q ss_pred CChhHHHH--HHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhc
Q 037275 916 LPDKVMEI--VDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGR 989 (992)
Q Consensus 916 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 989 (992)
........ +........... .......++.+++.+||+.||++|||++|+++.|+++.+++.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 250 IAQGQMTVLRLTELLERGERLP----------RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp SCCHHHHHHHHHHHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ccccchhHHHHHHHHhcccCCC----------CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 11111110 111110000000 01122356899999999999999999999999999999887654
No 156
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.4e-38 Score=342.68 Aligned_cols=252 Identities=21% Similarity=0.314 Sum_probs=202.0
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++. ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE-----cCCE
Confidence 4689999999999999999999998999999999975432 23466889999999999999999999964 4456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc---EEEe
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV---AHLG 832 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 832 (992)
.++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 699999999999999987543 589999999999999999999999 9999999999999976655 9999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
|||.+....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.+....
T Consensus 151 Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------- 213 (284)
T 3kk8_A 151 DFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-------- 213 (284)
T ss_dssp CCTTCEECCSSC---------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------
T ss_pred eceeeEEcccCc---------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--------
Confidence 999998765321 123356899999999999999999999999999999999999999753211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.............. .........++.+++.+||+.||++|||++|+++
T Consensus 214 ---------~~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 214 ---------RLYAQIKAGAYDYP--------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ---------HHHHHHHHTCCCCC--------TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---------HHHHHHHhccccCC--------chhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11111111110000 0000112345889999999999999999999986
No 157
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-38 Score=359.54 Aligned_cols=212 Identities=23% Similarity=0.377 Sum_probs=167.1
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc--CCCchhHHHHHHHHHHhcc-CCcceeEEEEeecccccC
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK--QKGASNGFVAECQALRNIR-HRNLIKIITICSSIDFKG 752 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 752 (992)
...++|++.+.||+|+||+||+|.+..+|+.||||++... .......+.+|+.+++++. ||||+++++++.. .+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~~ 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---DN 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---TT
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---CC
Confidence 3467899999999999999999999999999999998533 2233456789999999997 9999999999753 23
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEe
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLG 832 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 832 (992)
....++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRAN-------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHHT-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred CCEEEEEecccC-cCHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEec
Confidence 456799999997 5999998753 488999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCCC-------------cccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCC
Q 037275 833 DFGLAKFLSSSPLDTA-------------VETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPT 898 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~-------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf 898 (992)
|||+|+.......... ..........+||+.|+|||++.+ ..++.++||||+||++|||++|++||
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 231 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence 9999987643211100 001122344679999999999876 67899999999999999999999999
Q ss_pred CCC
Q 037275 899 DGM 901 (992)
Q Consensus 899 ~~~ 901 (992)
.+.
T Consensus 232 ~~~ 234 (388)
T 3oz6_A 232 PGS 234 (388)
T ss_dssp CCS
T ss_pred CCC
Confidence 874
No 158
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.8e-38 Score=356.13 Aligned_cols=283 Identities=22% Similarity=0.240 Sum_probs=207.9
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.++||+|+||.||+|.+..+++.||||++..... .....+.+|++++++++||||+++++++...........
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 4589999999999999999999998999999999964332 233678899999999999999999999876555556678
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||++ |+|.+++... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEcccC-cCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 99999996 5999998643 489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
++....... .........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+....+ .+.......
T Consensus 175 a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~ 248 (364)
T 3qyz_A 175 ARVADPDHD-----HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGIL 248 (364)
T ss_dssp CEECCGGGC-----BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHH
T ss_pred eEecCCCCC-----ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHh
Confidence 987653211 1112234579999999998654 458999999999999999999999998743322 122221111
Q ss_pred C--ChhHHHHHHhhHhHhhhccCCCCCCcc-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 L--PDKVMEIVDSVLLLEVQASNSRSCGDE-RLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
. +..............+........... .........++.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1 111000000000000000000000000 0000112356889999999999999999999985
No 159
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=9.3e-39 Score=367.04 Aligned_cols=248 Identities=26% Similarity=0.369 Sum_probs=202.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|.+.+.||+|+||.||+|++..+|+.||||++... .......+.+|+.+++.++||||+++++++. ...
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~-----~~~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS-----TPS 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECC
Confidence 35799999999999999999999989999999999643 2234567899999999999999999999964 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSSS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEec
Confidence 6799999999999999997543 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
|++....... ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+....
T Consensus 161 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--------- 222 (476)
T 2y94_A 161 GLSNMMSDGE---------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--------- 222 (476)
T ss_dssp SSCEECCTTC---------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---------
T ss_pred cchhhccccc---------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---------
Confidence 9998765321 1223469999999999988765 68999999999999999999999753211
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
........+.+. .+ .....++.+++.+||+.||++|||++|+++
T Consensus 223 --------~~~~~i~~~~~~------~p------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 223 --------TLFKKICDGIFY------TP------QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --------HHHHHHHTTCCC------CC------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------HHHHHHhcCCcC------CC------ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 111111111100 00 011245889999999999999999999986
No 160
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.8e-38 Score=351.28 Aligned_cols=253 Identities=23% Similarity=0.295 Sum_probs=198.6
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCcce
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 755 (992)
..++|++.+.||+|+||+||+|.+..+++.||||++..... ...+|++++.++ +||||+++++++. +...
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYD-----DGKY 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEE-----CSSE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEE-----cCCE
Confidence 35679999999999999999999999999999999964432 235788888888 7999999999953 4567
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC----CcEEE
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD----LVAHL 831 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl 831 (992)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++..+ +.+||
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQK------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred EEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEE
Confidence 799999999999999997643 489999999999999999999999 99999999999998443 35999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+|||+++...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... .
T Consensus 162 ~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~---- 227 (342)
T 2qr7_A 162 CDFGFAKQLRAEN--------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--T---- 227 (342)
T ss_dssp CCCTTCEECBCTT--------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--C----
T ss_pred EECCCcccCcCCC--------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--C----
Confidence 9999998765321 1223356899999999998888999999999999999999999999763221 1
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..++......+.+..... .......++.+++.+||+.||++|||+.|+++
T Consensus 228 --------~~~~~~~i~~~~~~~~~~--------~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 228 --------PEEILARIGSGKFSLSGG--------YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --------HHHHHHHHHHCCCCCCST--------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --------HHHHHHHHccCCcccCcc--------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111121111111110000 00112345889999999999999999999986
No 161
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.6e-39 Score=345.56 Aligned_cols=253 Identities=24% Similarity=0.335 Sum_probs=197.2
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
++|++.++||+|+||+||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++. .....+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~~ 96 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE-----DYHNMY 96 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee-----cCCeEE
Confidence 57899999999999999999999899999999997543 334678899999999999999999999964 445679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee---CCCCcEEEeec
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL---DQDLVAHLGDF 834 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Df 834 (992)
+||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQAR--GKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEeCCCCcHHHHHHhhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 999999999999999764321 34689999999999999999999999 99999999999999 45678999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|++....... ......||+.|+|||++. +.++.++||||+||++|||++|+.||.+.... +
T Consensus 172 g~a~~~~~~~---------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-----~---- 232 (285)
T 3is5_A 172 GLAELFKSDE---------HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-----E---- 232 (285)
T ss_dssp CCCCC-------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----H----
T ss_pred ecceecCCcc---------cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-----H----
Confidence 9998654321 123346899999999875 56899999999999999999999999763211 0
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.......... ...... .....++.+++.+||+.||++|||++|+++
T Consensus 233 --------~~~~~~~~~~-----~~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 233 --------VQQKATYKEP-----NYAVEC----RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --------HHHHHHHCCC-----CCCC------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred --------HHhhhccCCc-----cccccc----CcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000000 000000 001345789999999999999999999985
No 162
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.1e-38 Score=353.88 Aligned_cols=271 Identities=22% Similarity=0.356 Sum_probs=211.1
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCC-----eEEEEEEeeccCC-CchhHHHHHHHHHHhc-cCCcceeEEEEeecc
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENG-----MMVAVKVINLKQK-GASNGFVAECQALRNI-RHRNLIKIITICSSI 748 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 748 (992)
...++|++.+.||+|+||+||+|.+..++ ..||+|++..... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 121 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH- 121 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec-
Confidence 34568999999999999999999986555 3799999864432 2346789999999999 89999999999643
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccch--------hhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCC
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQ--------EARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSN 820 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~N 820 (992)
....++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+||||||+|
T Consensus 122 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 194 (333)
T 2i1m_A 122 ----GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194 (333)
T ss_dssp ----SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ----CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccce
Confidence 445699999999999999998654210 023579999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCC
Q 037275 821 VLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTD 899 (992)
Q Consensus 821 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~ 899 (992)
|+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 195 Il~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 268 (333)
T 2i1m_A 195 VLLTNGHVAKIGDFGLARDIMNDSN------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 268 (333)
T ss_dssp CEEEGGGEEEBCCCGGGCCGGGCTT------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred EEECCCCeEEECccccccccccccc------eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCc
Confidence 9999999999999999986543221 111223457889999999988899999999999999999999 999997
Q ss_pred CCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 037275 900 GMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKL 979 (992)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 979 (992)
+..... .....+.. ........ .....+.+++.+||+.||++|||+.||++.|
T Consensus 269 ~~~~~~-------------~~~~~~~~----~~~~~~~~----------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L 321 (333)
T 2i1m_A 269 GILVNS-------------KFYKLVKD----GYQMAQPA----------FAPKNIYSIMQACWALEPTHRPTFQQICSFL 321 (333)
T ss_dssp TCCSSH-------------HHHHHHHH----TCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ccchhH-------------HHHHHHhc----CCCCCCCC----------CCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 643221 11111111 11000000 1134588999999999999999999999999
Q ss_pred HHHHHhhh
Q 037275 980 CRARDTFL 987 (992)
Q Consensus 980 ~~~~~~~~ 987 (992)
+++.....
T Consensus 322 ~~~~~~~~ 329 (333)
T 2i1m_A 322 QEQAQEDR 329 (333)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 99876543
No 163
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=8.5e-39 Score=346.29 Aligned_cols=258 Identities=21% Similarity=0.352 Sum_probs=207.2
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccc------
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDF------ 750 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 750 (992)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ..+.+|++++++++||||+++++++....+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3457999999999999999999998899999999996432 456789999999999999999998754222
Q ss_pred -----cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC
Q 037275 751 -----KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ 825 (992)
Q Consensus 751 -----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 825 (992)
......++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG----EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 224567999999999999999986532 3689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCC
Q 037275 826 DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQG 905 (992)
Q Consensus 826 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~ 905 (992)
++.+||+|||.+....... ......|++.|+|||++.+..++.++||||||+++|+|++|..|+...
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---- 224 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG---------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---- 224 (284)
T ss_dssp TTEEEECCCTTCEESSCCS---------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----
T ss_pred CCCEEECcchhheeccccc---------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----
Confidence 9999999999998765422 122345899999999999999999999999999999999999886321
Q ss_pred ccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 906 LTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
. ........... . ......+.+++.+||+.||++|||+.|+++.|..+.+.
T Consensus 225 ---~------------~~~~~~~~~~~--------~------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 225 ---S------------KFFTDLRDGII--------S------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp ---H------------HHHHHHHTTCC--------C------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred ---H------------HHHHHhhcccc--------c------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 0 00000000000 0 01123478999999999999999999999999988765
Q ss_pred hh
Q 037275 986 FL 987 (992)
Q Consensus 986 ~~ 987 (992)
..
T Consensus 276 ~~ 277 (284)
T 2a19_B 276 PE 277 (284)
T ss_dssp --
T ss_pred CC
Confidence 44
No 164
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=354.61 Aligned_cols=260 Identities=22% Similarity=0.394 Sum_probs=200.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEE----EEEEeecc-CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccC
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMV----AVKVINLK-QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKG 752 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 752 (992)
.++|++.++||+|+||+||+|++..+++.| |+|.+... .....+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC----
Confidence 357999999999999999999997777654 66666432 334567899999999999999999999997532
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEe
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLG 832 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 832 (992)
..++|+||+.+|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 90 --~~~~v~~~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~ 159 (327)
T 3lzb_A 90 --TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp --SEEEEECCCSSCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred --CceEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEc
Confidence 25899999999999999986543 489999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~ 911 (992)
|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.....
T Consensus 160 DfG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------ 227 (327)
T 3lzb_A 160 DFGLAKLLGAEEK------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------ 227 (327)
T ss_dssp CTTC----------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------
T ss_pred cCcceeEccCccc------cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------
Confidence 9999987653321 112223457889999999999999999999999999999999 999997643221
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
....+.. ...... ......++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 228 --------~~~~~~~----~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 228 --------ISSILEK----GERLPQ----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --------HHHHHHT----TCCCCC----------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred --------HHHHHHc----CCCCCC----------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1111111 000000 011234588999999999999999999999999998754
No 165
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-38 Score=342.68 Aligned_cols=247 Identities=27% Similarity=0.373 Sum_probs=179.5
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. ...
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 86 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKD 86 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCC
Confidence 358999999999999999999998899999999986432 233567899999999999999999999964 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+ ++++.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 87 ~~~lv~e~~-~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Df 156 (275)
T 2eue_A 87 EIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp CEEEEEECC-CEEHHHHHHTSS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCS
T ss_pred eEEEEehhc-CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeec
Confidence 679999999 678888887543 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
|.+....... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+....
T Consensus 157 g~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------- 218 (275)
T 2eue_A 157 GLSNIMTDGN---------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------- 218 (275)
T ss_dssp SCC------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH---------
T ss_pred ccceeccCcc---------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH---------
Confidence 9997654321 1223458999999999888765 78999999999999999999999753211
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
............ .+ ......+.+++.+||+.||++|||++|+++
T Consensus 219 --------~~~~~~~~~~~~------~~------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 219 --------VLFKNISNGVYT------LP------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --------HHHHHHHHTCCC------CC------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --------HHHHHHHhCCCC------CC------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 111111111000 00 012345889999999999999999999975
No 166
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.8e-39 Score=353.90 Aligned_cols=245 Identities=23% Similarity=0.340 Sum_probs=201.4
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--------CchhHHHHHHHHHHhccCCcceeEEEEeec
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--------GASNGFVAECQALRNIRHRNLIKIITICSS 747 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 747 (992)
...++|++.+.||+|+||+||+|++..+++.||||+++.... .....+.+|+.++++++||||+++++++.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~- 99 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE- 99 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE-
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 345689999999999999999999999999999999975431 13346788999999999999999999964
Q ss_pred ccccCcceEEEEEEeccCC-CHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC
Q 037275 748 IDFKGVDFQAIVYEYMQNG-SLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD 826 (992)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 826 (992)
.....++||||+.+| +|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 100 ----~~~~~~lv~e~~~~g~~l~~~~~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 166 (335)
T 3dls_A 100 ----NQGFFQLVMEKHGSGLDLFAFIDRHP------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAED 166 (335)
T ss_dssp ----CSSEEEEEEECCTTSCBHHHHHHTCC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred ----eCCEEEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCC
Confidence 455679999999777 9999997653 489999999999999999999999 99999999999999999
Q ss_pred CcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccCC
Q 037275 827 LVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQG 905 (992)
Q Consensus 827 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~ 905 (992)
+.+||+|||+++...... ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......
T Consensus 167 ~~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~- 236 (335)
T 3dls_A 167 FTIKLIDFGSAAYLERGK---------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET- 236 (335)
T ss_dssp SCEEECCCTTCEECCTTC---------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-
T ss_pred CcEEEeecccceECCCCC---------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-
Confidence 999999999998765422 1223468999999999988876 78999999999999999999999752110
Q ss_pred ccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 906 LTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
...... .. .....++.+++.+||+.||++|||++|+++.
T Consensus 237 ------~~~~~~------------------~~----------~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ------VEAAIH------------------PP----------YLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ------TTTCCC------------------CS----------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ------HhhccC------------------CC----------cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00 0012458899999999999999999999874
No 167
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.1e-39 Score=352.34 Aligned_cols=277 Identities=19% Similarity=0.239 Sum_probs=210.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||.||+|++..+++.||||++........+.+.+|+.++++++||||+++++++... .......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCceeE
Confidence 45799999999999999999999889999999998765555667889999999999999999999987532 12345779
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDK--GNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEeCCCCcHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999999864321 34689999999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCCCCCc-ccCCCCCcccccccccccccccCCC---cCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 838 KFLSSSPLDTAV-ETPSSSKGIKGTVGYIAPEYGMGGE---ASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 838 ~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
............ ..........||+.|+|||++.+.. ++.++|||||||++|||++|+.||..............
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~- 260 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV- 260 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH-
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh-
Confidence 765321100000 0000012234799999999987653 78899999999999999999999864322211111111
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
.. .... + .......++.+++.+||+.||++|||++|+++.|+++....
T Consensus 261 -----------~~----~~~~------~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 261 -----------QN----QLSI------P----QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp -----------HC----C--C------C----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred -----------hc----cCCC------C----ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 00 0000 0 00112345889999999999999999999999999876543
No 168
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-38 Score=354.91 Aligned_cols=267 Identities=21% Similarity=0.262 Sum_probs=202.0
Q ss_pred HHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc-----CCCchhHHHHHHHHHHhccCCcceeEEEEeecc
Q 037275 674 LSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK-----QKGASNGFVAECQALRNIRHRNLIKIITICSSI 748 (992)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 748 (992)
+....++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|+.++++++||||+++++++.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-- 98 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE-- 98 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc--
Confidence 345566899999999999999999999999999999998643 2345678899999999999999999999964
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccch----------------------------------hhcccCHHHHHHHHH
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQ----------------------------------EARSLTLIQRINIII 794 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------------------------------~~~~l~~~~~~~i~~ 794 (992)
.....++||||+++|+|.+++....... ....+++..++.++.
T Consensus 99 ---~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 99 ---DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp ---CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred ---cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 4556799999999999999996321110 012356788899999
Q ss_pred HHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC--cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC
Q 037275 795 DVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL--VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG 872 (992)
Q Consensus 795 qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 872 (992)
|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++.+...... .........||+.|+|||++.+
T Consensus 176 qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~ 248 (345)
T 3hko_A 176 QIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG----EYYGMTTKAGTPYFVAPEVLNT 248 (345)
T ss_dssp HHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHHTC
T ss_pred HHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCcc----ccccccccCCCccccCchhhcc
Confidence 999999999999 999999999999998776 8999999999876432111 1112234568999999999865
Q ss_pred --CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHH
Q 037275 873 --GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEER 950 (992)
Q Consensus 873 --~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 950 (992)
..++.++|||||||++|||++|+.||.+....+ . ...+... ... .........
T Consensus 249 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~------------~~~~~~~----~~~--------~~~~~~~~~ 303 (345)
T 3hko_A 249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD-T------------ISQVLNK----KLC--------FENPNYNVL 303 (345)
T ss_dssp SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H------------HHHHHHC----CCC--------TTSGGGGGS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHH-H------------HHHHHhc----ccc--------cCCcccccC
Confidence 678999999999999999999999997642211 0 0111110 000 000011112
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 951 LVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 951 ~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..++.+++.+||+.||++|||+.|+++
T Consensus 304 ~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 304 SPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 346889999999999999999999986
No 169
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.6e-38 Score=350.47 Aligned_cols=249 Identities=21% Similarity=0.304 Sum_probs=191.1
Q ss_pred hcCCCCCCccccccceEEEEeEEC---CCCeEEEEEEeeccC----CCchhHHHHHHHHHHhccCCcceeEEEEeecccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLG---ENGMMVAVKVINLKQ----KGASNGFVAECQALRNIRHRNLIKIITICSSIDF 750 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 750 (992)
.++|++.++||+|+||.||+|+.. .+++.||+|+++... ......+.+|+.+++.++||||+++++++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---- 91 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ---- 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE----
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE----
Confidence 458999999999999999999984 588999999996432 233456788999999999999999999864
Q ss_pred cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEE
Q 037275 751 KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAH 830 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 830 (992)
.....++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 92 -~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 92 -TGGKLYLILEYLSGGELFMQLEREG------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp -CSSCEEEEEECCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred -cCCEEEEEEeCCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 3556799999999999999997543 488999999999999999999999 999999999999999999999
Q ss_pred EeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHH
Q 037275 831 LGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHE 910 (992)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~ 910 (992)
|+|||+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 162 l~Dfg~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------ 227 (327)
T 3a62_A 162 LTDFGLCKESIHD--------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------ 227 (327)
T ss_dssp ECCCSCC------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------
T ss_pred EEeCCcccccccC--------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------
Confidence 9999999754321 11223456899999999999999999999999999999999999999763211
Q ss_pred HHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 037275 911 FARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM-----EMRDVVA 977 (992)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 977 (992)
+........... .+ .....++.+++.+||+.||++|| +++|+++
T Consensus 228 -----------~~~~~i~~~~~~------~p------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 228 -----------KTIDKILKCKLN------LP------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -----------HHHHHHHHTCCC------CC------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -----------HHHHHHHhCCCC------CC------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 111111111100 00 01134588999999999999999 7778765
No 170
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-39 Score=360.27 Aligned_cols=267 Identities=25% Similarity=0.412 Sum_probs=198.7
Q ss_pred CCCCCCccccccceEEEEeEECCC---CeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 680 DFSSSNMIGQGSFGFVYKGNLGEN---GMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.|++.++||+|+||+||+|++..+ +..||+|.++... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----~~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC----CSSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CCCC
Confidence 466778999999999999997432 3468999986433 3345778999999999999999999998643 3345
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG 237 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFG 237 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred eEEEEECCCCCCHHHHHhhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecc
Confidence 6899999999999999976432 478999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~ 914 (992)
+++........ .........+|+.|+|||++.+..++.++|||||||++|||++ |.+||.+....+ .......
T Consensus 238 ~a~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~ 311 (373)
T 3c1x_A 238 LARDMYDKEFD----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQ 311 (373)
T ss_dssp ------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHT
T ss_pred ccccccccccc----cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHc
Confidence 99866433211 1112233457889999999999999999999999999999999 777886543221 1111100
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhcc
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGRM 990 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 990 (992)
.. ..... ......+.+++.+||+.||++|||++|+++.|+++.+.+.+..
T Consensus 312 ---------------~~-~~~~p----------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 312 ---------------GR-RLLQP----------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp ---------------TC-CCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred ---------------CC-CCCCC----------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 00 00000 1123458899999999999999999999999999998876543
No 171
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.4e-39 Score=354.44 Aligned_cols=277 Identities=21% Similarity=0.339 Sum_probs=214.3
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEeEE-----CCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhc-cCCcceeEEE
Q 037275 671 YAELSKATNDFSSSNMIGQGSFGFVYKGNL-----GENGMMVAVKVINLKQK-GASNGFVAECQALRNI-RHRNLIKIIT 743 (992)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~ 743 (992)
..+.....++|++.+.||+|+||+||+|++ ..+++.||||+++.... ...+.+.+|+.+++++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 344445567999999999999999999985 34678999999964432 2345788999999999 7999999999
Q ss_pred EeecccccCcceEEEEEEeccCCCHHHHHhhcccch----------hhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 037275 744 ICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQ----------EARSLTLIQRINIIIDVASAIEYIHHHCQPPVVH 813 (992)
Q Consensus 744 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH 813 (992)
++.. .....++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+|
T Consensus 99 ~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H 171 (316)
T 2xir_A 99 ACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIH 171 (316)
T ss_dssp EECC----TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred EEec----CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 9743 2345699999999999999998654310 012378999999999999999999999 9999
Q ss_pred ccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh
Q 037275 814 GDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT 893 (992)
Q Consensus 814 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 893 (992)
|||||+||+++.++.+||+|||.++....... ........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 172 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t 245 (316)
T 2xir_A 172 RDLAARNILLSEKNVVKICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245 (316)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTT------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ccCccceEEECCCCCEEECCCccccccccCcc------ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999986643221 111233457889999999999999999999999999999998
Q ss_pred -CCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 037275 894 -RRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM 972 (992)
Q Consensus 894 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 972 (992)
|+.||.+...... ....+.. ....... .....++.+++.+||+.||++|||+
T Consensus 246 ~g~~p~~~~~~~~~-------------~~~~~~~----~~~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~ 298 (316)
T 2xir_A 246 LGASPYPGVKIDEE-------------FCRRLKE----GTRMRAP----------DYTTPEMYQTMLDCWHGEPSQRPTF 298 (316)
T ss_dssp TSCCSSTTCCCSHH-------------HHHHHHH----TCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCcccchhHH-------------HHHHhcc----CccCCCC----------CCCCHHHHHHHHHHcCCChhhCcCH
Confidence 9999976432211 1111100 0000000 0113458899999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 037275 973 RDVVAKLCRARDTFL 987 (992)
Q Consensus 973 ~evl~~L~~~~~~~~ 987 (992)
.|+++.|+++.....
T Consensus 299 ~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 299 SELVEHLGNLLQANA 313 (316)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhc
Confidence 999999999886543
No 172
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.8e-39 Score=358.52 Aligned_cols=251 Identities=27% Similarity=0.315 Sum_probs=192.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHH-HHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQA-LRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.++||+|+||+||+|++..+++.||+|+++... ......+.+|..+ ++.++||||+++++++. ..
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~-----~~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-----TA 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE-----CS
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE-----eC
Confidence 357999999999999999999999999999999997543 2233456677776 56789999999999854 45
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEee
Confidence 67799999999999999997643 488999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||+++..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 183 FG~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------- 245 (373)
T 2r5t_A 183 FGLCKENIEH--------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------- 245 (373)
T ss_dssp CCBCGGGBCC--------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH---------
T ss_pred CccccccccC--------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---------
Confidence 9999854321 12234457999999999999999999999999999999999999999753211
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKL 979 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 979 (992)
+........... .. ......+.+++.+||+.||++||++.+.++.+
T Consensus 246 --------~~~~~i~~~~~~------~~------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 246 --------EMYDNILNKPLQ------LK------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp --------HHHHHHHHSCCC------CC------SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred --------HHHHHHHhcccC------CC------CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 111111111100 00 01134578999999999999999986544443
No 173
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.1e-39 Score=368.29 Aligned_cols=262 Identities=29% Similarity=0.474 Sum_probs=204.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.++||+|+||+||+|.+. .+..||||+++... ...+.+.+|+.++++++||||+++++++.. ...+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~~ 254 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 254 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------CceE
Confidence 357888999999999999999997 46789999997443 345789999999999999999999998643 3458
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 255 iv~e~~~~gsL~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 327 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 327 (452)
T ss_dssp EEECCCTTCBHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred EEehhhcCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccc
Confidence 9999999999999997543 23589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
+....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.+....
T Consensus 328 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------------ 388 (452)
T 1fmk_A 328 RLIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------------ 388 (452)
T ss_dssp C---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------------
T ss_pred eecCCCce-------ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH------------
Confidence 87653221 11223347889999999998899999999999999999999 99999764221
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhc
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGR 989 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 989 (992)
+...... ........ ......+.+++.+||+.||++|||+++|++.|+++.....++
T Consensus 389 -----~~~~~i~-~~~~~~~~----------~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~ 445 (452)
T 1fmk_A 389 -----EVLDQVE-RGYRMPCP----------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445 (452)
T ss_dssp -----HHHHHHH-TTCCCCCC----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred -----HHHHHHH-cCCCCCCC----------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence 1111111 00000000 122346889999999999999999999999999887655444
No 174
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.5e-38 Score=362.61 Aligned_cols=254 Identities=22% Similarity=0.307 Sum_probs=193.7
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--------CCchhHHHHHHHHHHhccCCcceeEEEEeec
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--------KGASNGFVAECQALRNIRHRNLIKIITICSS 747 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 747 (992)
...++|.+.+.||+|+||+||+|.+..+++.||||++.... ......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999999999999999996432 1223457899999999999999999998532
Q ss_pred ccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC
Q 037275 748 IDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL 827 (992)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 827 (992)
...++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 212 ------~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~ 276 (419)
T 3i6u_A 212 ------EDYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE 276 (419)
T ss_dssp ------SEEEEEEECCTTCBGGGGTSSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS
T ss_pred ------CceEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCC
Confidence 23589999999999999886543 589999999999999999999999 999999999999996544
Q ss_pred ---cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC---CCcCcccchhhHHHHHHHHHhCCCCCCCC
Q 037275 828 ---VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG---GEASMTGDVYSFGILLLEMFTRRRPTDGM 901 (992)
Q Consensus 828 ---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlG~il~elltg~~pf~~~ 901 (992)
.+||+|||+|+..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 277 ~~~~~kl~DFG~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~ 347 (419)
T 3i6u_A 277 EDCLIKITDFGHSKILGET---------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347 (419)
T ss_dssp SSCCEEECCSSTTTSCC--------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred CcceEEEeecccceecCCC---------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 5999999999876432 12233568999999999853 57888999999999999999999999864
Q ss_pred ccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 902 FNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
................. ..... ......+.+++.+||+.||++|||++|+++
T Consensus 348 ~~~~~~~~~i~~~~~~~-~~~~~-----------------------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 348 RTQVSLKDQITSGKYNF-IPEVW-----------------------AEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SSSCCHHHHHHTTCCCC-CHHHH-----------------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cchHHHHHHHhcCCCCC-Cchhh-----------------------cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 33322222211111110 00000 012345889999999999999999999986
No 175
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=356.43 Aligned_cols=275 Identities=21% Similarity=0.307 Sum_probs=195.3
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
++|++.+.||+|+||+||+|++..+++.||+|++..... .....+.+|+.++++++||||+++++++. .....+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE-----CSSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe-----eCCEEE
Confidence 578999999999999999999998999999999864432 22234567999999999999999999964 345679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||++ |+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCGN-----IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp EEEECCS-EEHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEecccc-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccc
Confidence 9999997 599999876543 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh--
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART-- 914 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~-- 914 (992)
+...... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+....+ ........
T Consensus 148 ~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~ 218 (324)
T 3mtl_A 148 RAKSIPT--------KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILG 218 (324)
T ss_dssp ECC--------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred ccccCCc--------cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 8654321 11223468999999999876 568999999999999999999999998643221 11111111
Q ss_pred -hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 -ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..+..+...........+.... ...............++.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 219 TPTEETWPGILSNEEFKTYNYPK-YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCTTTSTTGGGCHHHHHTCCCC-CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCChHhchhhhcchhhccccccc-ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0011111111100000000000 0000000001112356789999999999999999999986
No 176
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.4e-39 Score=357.83 Aligned_cols=280 Identities=21% Similarity=0.330 Sum_probs=193.6
Q ss_pred HHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccc
Q 037275 673 ELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDF 750 (992)
Q Consensus 673 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 750 (992)
......++|++.++||+|+||+||+|++..+++.||||+++.... .....+.+|+.++++++||||+++++++.
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---- 103 (329)
T 3gbz_A 28 PSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH---- 103 (329)
T ss_dssp ----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE----
T ss_pred CcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe----
Confidence 344567799999999999999999999999999999999964432 22456789999999999999999999964
Q ss_pred cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee-----CC
Q 037275 751 KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL-----DQ 825 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll-----~~ 825 (992)
.....++||||++ |+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.
T Consensus 104 -~~~~~~lv~e~~~-~~L~~~~~~~~------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 172 (329)
T 3gbz_A 104 -HNHRLHLIFEYAE-NDLKKYMDKNP------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASE 172 (329)
T ss_dssp -ETTEEEEEEECCS-EEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----
T ss_pred -cCCEEEEEEecCC-CCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCc
Confidence 3456799999997 59999997654 489999999999999999999999 99999999999999 45
Q ss_pred CCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCccC
Q 037275 826 DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMFNQ 904 (992)
Q Consensus 826 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 904 (992)
++.+||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....
T Consensus 173 ~~~~kl~Dfg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 244 (329)
T 3gbz_A 173 TPVLKIGDFGLARAFGIPI--------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI 244 (329)
T ss_dssp CCEEEECCTTHHHHHC-------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred cceEEECcCCCccccCCcc--------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH
Confidence 5669999999998764321 112334679999999998875 4899999999999999999999999764322
Q ss_pred CccHHHHHhhhCChh-HHHHHHhhHhHhhhccCC--CCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 905 GLTLHEFARTALPDK-VMEIVDSVLLLEVQASNS--RSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 905 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+...........+.. ....... ......... ...............++.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 245 DQLFKIFEVLGLPDDTTWPGVTA--LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHHHHCCCCTTTSTTGGG--STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHhCCCchhhhhhhhh--hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 111111000001100 0000000 000000000 0000000000012356889999999999999999999975
No 177
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.6e-38 Score=342.60 Aligned_cols=254 Identities=22% Similarity=0.295 Sum_probs=203.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. .....
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 80 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQ 80 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE-----cCCEE
Confidence 467999999999999999999999899999999997443 334577899999999999999999999864 34566
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 151 (276)
T 2yex_A 81 YLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (276)
T ss_dssp EEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCC
Confidence 99999999999999986432 489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
+....... .........|++.|+|||++.+..+ +.++||||||+++|||++|+.||............+....
T Consensus 152 ~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (276)
T 2yex_A 152 ATVFRYNN------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225 (276)
T ss_dssp CEECEETT------EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC
T ss_pred ccccCCCc------chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc
Confidence 98654321 1112234568999999999887765 7789999999999999999999987543322222211110
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
... .........+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 226 TYL--------------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTS--------------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccc--------------------------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 000 000112345789999999999999999999975
No 178
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9.6e-39 Score=345.09 Aligned_cols=260 Identities=20% Similarity=0.356 Sum_probs=203.4
Q ss_pred hcCCCCCCccccccceEEEEeEECC---CCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGE---NGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.+.||+|+||+||+|++.. ++..||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE------ 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS------
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC------
Confidence 4689999999999999999998642 34579999986442 2345678999999999999999999998642
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 85 ~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 156 (281)
T 3cc6_A 85 EPTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGD 156 (281)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECC
T ss_pred CCCEEEEecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCc
Confidence 234899999999999999976432 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 912 (992)
||.+........ .......+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ..
T Consensus 157 fg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~--- 224 (281)
T 3cc6_A 157 FGLSRYIEDEDY-------YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VI--- 224 (281)
T ss_dssp CCGGGCC----------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HH---
T ss_pred cCCCcccccccc-------cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HH---
Confidence 999987654221 11223457889999999988899999999999999999998 999997532221 11
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
..+.. ... .... ......+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 225 ---------~~~~~---~~~-~~~~----------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 225 ---------GVLEK---GDR-LPKP----------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp ---------HHHHH---TCC-CCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---------HHHhc---CCC-CCCC----------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 11100 000 0000 012345889999999999999999999999999987643
No 179
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-38 Score=346.26 Aligned_cols=268 Identities=24% Similarity=0.372 Sum_probs=206.5
Q ss_pred CCCCCCccccccceEEEEeEECCCC---eEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 680 DFSSSNMIGQGSFGFVYKGNLGENG---MMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.|+..++||+|+||+||+|++..++ ..||+|++..... ...+.+.+|+.++++++||||+++++++.. ....
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP----PEGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SSSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec----CCCC
Confidence 4666789999999999999975443 4799999864332 234678899999999999999999999743 2334
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+.+|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 169 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQ-----RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFG 169 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTT-----CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTT
T ss_pred cEEEEecccCCCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCC
Confidence 489999999999999997643 2488999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
.++........ .........+++.|+|||.+.+..++.++|||||||++|+|++|..|+....+.. ...
T Consensus 170 ~~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~------ 238 (298)
T 3pls_A 170 LARDILDREYY----SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLT------ 238 (298)
T ss_dssp SSCTTTTGGGG----CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHH------
T ss_pred CcccccCCccc----ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHH------
Confidence 99865432211 1222334568899999999999999999999999999999999655543322211 111
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhcc
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGRM 990 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 990 (992)
..+... ..... .......+.+++.+||+.||++|||++|+++.|+++.+.+.+..
T Consensus 239 ------~~~~~~----~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 239 ------HFLAQG----RRLPQ----------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp ------HHHHTT----CCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred ------HHhhcC----CCCCC----------CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 111100 00000 01113458899999999999999999999999999998876543
No 180
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.1e-38 Score=350.00 Aligned_cols=267 Identities=22% Similarity=0.373 Sum_probs=207.8
Q ss_pred hcCCCCCCccccccceEEEEeEEC-------CCCeEEEEEEeeccCC-CchhHHHHHHHHHHhc-cCCcceeEEEEeecc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLG-------ENGMMVAVKVINLKQK-GASNGFVAECQALRNI-RHRNLIKIITICSSI 748 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 748 (992)
.++|++.+.||+|+||+||+|++. .+++.||||+++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-
Confidence 468999999999999999999975 3567899999964432 2346788999999999 89999999999643
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccch----------hhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCC
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQ----------EARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKP 818 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 818 (992)
....++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+||||||
T Consensus 113 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 185 (334)
T 2pvf_A 113 ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185 (334)
T ss_dssp ----SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred ----CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCcc
Confidence 445699999999999999998654210 123489999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCC
Q 037275 819 SNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRP 897 (992)
Q Consensus 819 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~p 897 (992)
+||+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 259 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDY------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSS------EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ceEEEcCCCCEEEcccccccccccccc------ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999987654321 111223357889999999988899999999999999999999 9999
Q ss_pred CCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 898 TDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 898 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
|.+.... + +....... ...... .....++.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~-----~------------~~~~~~~~-~~~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 260 YPGIPVE-----E------------LFKLLKEG-HRMDKP----------ANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp STTCCHH-----H------------HHHHHHHT-CCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCcCCHH-----H------------HHHHHhcC-CCCCCC----------ccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9753211 1 11111000 000000 112345889999999999999999999999
Q ss_pred HHHHHHHhh
Q 037275 978 KLCRARDTF 986 (992)
Q Consensus 978 ~L~~~~~~~ 986 (992)
.|+++....
T Consensus 312 ~L~~l~~~~ 320 (334)
T 2pvf_A 312 DLDRILTLT 320 (334)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 999987654
No 181
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.6e-38 Score=350.46 Aligned_cols=272 Identities=19% Similarity=0.260 Sum_probs=204.3
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-CCcceeEEEEeecccccCcceEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR-HRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
++|++.++||+|+||+||+|++..+++.||||+++. ...+.+.+|+.++++++ ||||+++++++.. ......+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~---~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKD---PVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeecc---CCCCceE
Confidence 579999999999999999999988999999999863 34577899999999997 9999999999754 2245679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC-cEEEeeccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL-VAHLGDFGL 836 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~ 836 (992)
+||||+++++|.+++. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+
T Consensus 110 lv~e~~~~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ---------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp EEEECCCCCCHHHHGG---------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEeccCchhHHHHHH---------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 9999999999999985 378889999999999999999999 999999999999999777 899999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
|+...... ......|++.|+|||++.+ ..++.++||||+||++|+|++|+.||.........+.......
T Consensus 178 a~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~ 248 (330)
T 3nsz_A 178 AEFYHPGQ---------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 248 (330)
T ss_dssp CEECCTTC---------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred ceEcCCCC---------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhc
Confidence 98765322 1223468999999999877 6789999999999999999999999965433322222222222
Q ss_pred CChhHHHHHHhhHhH---hhh---ccCCCCCCc---cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLL---EVQ---ASNSRSCGD---ERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~---~~~---~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
......+.++..... ... ......... ..........++.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 249 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 222222222211000 000 000000000 00001113456899999999999999999999986
No 182
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.7e-38 Score=352.60 Aligned_cols=247 Identities=26% Similarity=0.358 Sum_probs=196.8
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC---chhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG---ASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
+.|+..+.||+|+||+||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++.. ...
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCe
Confidence 4588899999999999999999889999999999754332 23568899999999999999999999643 456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+. |++.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred EEEEEecCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeecc
Confidence 799999996 68888886543 2589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCccccccccccccccc---CCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM---GGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
++...... ....||+.|+|||++. +..++.++|||||||++|||++|+.||.+....
T Consensus 200 ~a~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-------- 259 (348)
T 1u5q_A 200 SASIMAPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------- 259 (348)
T ss_dssp TCBSSSSB------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------
T ss_pred CceecCCC------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--------
Confidence 99765321 2346899999999874 567899999999999999999999998753211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
..+.......... . ........+.+++.+||+.||++|||++|+++.
T Consensus 260 ---------~~~~~~~~~~~~~-----~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 260 ---------SALYHIAQNESPA-----L-----QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ---------HHHHHHHHSCCCC-----C-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ---------HHHHHHHhcCCCC-----C-----CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000011000000 0 001113457899999999999999999999753
No 183
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=358.67 Aligned_cols=273 Identities=14% Similarity=0.173 Sum_probs=206.5
Q ss_pred cCCCCCCccccccceEEEEeEECC--------CCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCccee----------
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGE--------NGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIK---------- 740 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 740 (992)
++|++.+.||+|+||+||+|++.. .++.||+|++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 589999999999999999999986 4889999998633 46889999999999999998
Q ss_pred -----EEEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEecc
Q 037275 741 -----IITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGD 815 (992)
Q Consensus 741 -----~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 815 (992)
+++++. ......++||||+ +++|.+++..... ..+++..++.++.|++.||+|||++ +|+|||
T Consensus 117 ~~i~~~~~~~~----~~~~~~~lv~e~~-~~~L~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~D 184 (352)
T 2jii_A 117 LAIPTCMGFGV----HQDKYRFLVLPSL-GRSLQSALDVSPK----HVLSERSVLQVACRLLDALEFLHEN---EYVHGN 184 (352)
T ss_dssp CSCCCCCEEEE----ETTTEEEEEEECC-CEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSC
T ss_pred cCccchhhccc----cCCcEEEEEecCC-CcCHHHHHHhCCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCC
Confidence 444432 2356779999999 9999999986532 3699999999999999999999999 999999
Q ss_pred CCCCCeeeCCCC--cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh
Q 037275 816 LKPSNVLLDQDL--VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT 893 (992)
Q Consensus 816 lkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 893 (992)
|||+||+++.++ .+||+|||+++........... .........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 263 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY-VEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY 263 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC-CTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCccccc-cccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence 999999999998 9999999999876543211111 1122234579999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 037275 894 RRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMR 973 (992)
Q Consensus 894 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 973 (992)
|+.||.......... ........ ... ......+.. ......++.+++.+||+.||++|||++
T Consensus 264 g~~pf~~~~~~~~~~------------~~~~~~~~-~~~-~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ 325 (352)
T 2jii_A 264 GFLPWTNCLPNTEDI------------MKQKQKFV-DKP-GPFVGPCGH----WIRPSETLQKYLKVVMALTYEEKPPYA 325 (352)
T ss_dssp SCCTTGGGTTCHHHH------------HHHHHHHH-HSC-CCEECTTSC----EECCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred CCCCcccCCcCHHHH------------HHHHHhcc-CCh-hhhhhhccc----cCCCcHHHHHHHHHHHhCChhhCCCHH
Confidence 999997643221111 11110000 000 000000000 001135689999999999999999999
Q ss_pred HHHHHHHHHHHhhh
Q 037275 974 DVVAKLCRARDTFL 987 (992)
Q Consensus 974 evl~~L~~~~~~~~ 987 (992)
||++.|+++.+...
T Consensus 326 ~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 326 MLRNNLEALLQDLR 339 (352)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999987653
No 184
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.2e-38 Score=343.91 Aligned_cols=251 Identities=25% Similarity=0.379 Sum_probs=199.1
Q ss_pred CCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 680 DFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.|++.+.||+|+||+||+|.+..++..||+|++.... ....+.+.+|+.++++++||||+++++++... ..+....+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceEE
Confidence 4778889999999999999999999999999987443 23346789999999999999999999987542 23456789
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCCeeeC-CCCcEEEeec
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPP--VVHGDLKPSNVLLD-QDLVAHLGDF 834 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Df 834 (992)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+||
T Consensus 106 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Df 176 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCT
T ss_pred EEEEecCCCCHHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeC
Confidence 9999999999999997543 589999999999999999999999 7 99999999999997 7899999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|++...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||................
T Consensus 177 g~~~~~~~~----------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 245 (290)
T 1t4h_A 177 GLATLKRAS----------FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG 245 (290)
T ss_dssp TGGGGCCTT----------SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT
T ss_pred CCccccccc----------ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhcc
Confidence 999754322 122346899999999876 458999999999999999999999997532221111110000
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..+. ........++.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 246 VKPA--------------------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCCG--------------------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCcc--------------------------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0000 000011245889999999999999999999985
No 185
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.5e-38 Score=369.42 Aligned_cols=254 Identities=25% Similarity=0.347 Sum_probs=204.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.++||+|+||.||+|++..+|+.||+|++... .......+.+|+.++++++||||+++++++. ...
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-----~~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-----TKD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe-----eCC
Confidence 45799999999999999999999989999999999643 2344567889999999999999999999854 456
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~----~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQ----AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 77999999999999999976542 2489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+|+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+...... ...
T Consensus 331 Gla~~~~~~~---------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~---- 396 (576)
T 2acx_A 331 GLAVHVPEGQ---------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REE---- 396 (576)
T ss_dssp TTCEECCTTC---------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHH----
T ss_pred ccceecccCc---------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHH----
Confidence 9998765321 12234799999999999999999999999999999999999999986432211 111
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM-----EMRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 977 (992)
+...+ .. .... .+ .....++.+++.+||+.||++|| +++||++
T Consensus 397 -----i~~~i---~~--~~~~----~p------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 397 -----VERLV---KE--VPEE----YS------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -----HHHHH---HH--CCCC----CC------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -----HHHHh---hc--cccc----CC------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11111 00 0000 00 11234588999999999999999 7888875
No 186
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=8.4e-38 Score=359.75 Aligned_cols=272 Identities=21% Similarity=0.267 Sum_probs=208.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.++||+|+||.||+|++..+++.||||++.... ....+.+|+++++.++|++.+..+.++. ......+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~----~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFG----VEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEE----EETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEE----eeCCEEE
Confidence 368999999999999999999998899999999986443 2345889999999998755554444432 2345669
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee---CCCCcEEEeec
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL---DQDLVAHLGDF 834 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Df 834 (992)
+||||+ +++|.+++..... .+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+||
T Consensus 80 lvme~~-g~sL~~ll~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSR-----KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEECC-CCCHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeC
Confidence 999999 9999999985432 489999999999999999999999 99999999999999 58899999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+++.+......... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+...... .+...
T Consensus 151 Gla~~~~~~~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~- 226 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHI-PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYE- 226 (483)
T ss_dssp TTCEECBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHH-
T ss_pred CcceeccCCcccccc-ccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHH-
Confidence 999987653321111 11223356799999999999999999999999999999999999999987533211 11110
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
.+........... .......++.+++..||+.||++||++++|++.|+++....
T Consensus 227 -------~i~~~~~~~~~~~-----------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 227 -------KISEKKVATSIEA-----------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp -------HHHHHHHHSCHHH-----------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -------HHhhccccccHHH-----------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 0111000000000 00011346899999999999999999999999999987644
No 187
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.3e-37 Score=346.69 Aligned_cols=282 Identities=22% Similarity=0.318 Sum_probs=214.2
Q ss_pred cHHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHh--ccCCcceeEEEEeec
Q 037275 670 SYAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRN--IRHRNLIKIITICSS 747 (992)
Q Consensus 670 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~ 747 (992)
+...-....++|++.+.||+|+||+||+|++ +++.||||++... ....+.+|+++++. ++||||+++++++..
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3333445567899999999999999999998 5899999998533 34567889999888 789999999999754
Q ss_pred ccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeccCCCC
Q 037275 748 IDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIH--------HHCQPPVVHGDLKPS 819 (992)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~ 819 (992)
.. ......++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+
T Consensus 108 ~~-~~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~ 176 (342)
T 1b6c_B 108 DN-GTWTQLWLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSK 176 (342)
T ss_dssp CC-SSCCCEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGG
T ss_pred cC-CccceeEEEEeecCCCcHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHH
Confidence 32 1123679999999999999999753 4899999999999999999999 77 9999999999
Q ss_pred CeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC------CcCcccchhhHHHHHHHHHh
Q 037275 820 NVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG------EASMTGDVYSFGILLLEMFT 893 (992)
Q Consensus 820 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~ellt 893 (992)
||+++.++.+||+|||++.......... ........||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 177 NIll~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~t 252 (342)
T 1b6c_B 177 NILVKKNGTCCIADLGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252 (342)
T ss_dssp GEEECTTSCEEECCCTTCEEEETTTTEE----EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HEEECCCCCEEEEECCCceecccccccc----ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHh
Confidence 9999999999999999998765432110 0122345699999999998765 34478999999999999999
Q ss_pred C----------CCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccC
Q 037275 894 R----------RRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSM 963 (992)
Q Consensus 894 g----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 963 (992)
| +.||............+...... . ..+..........+....+.+++.+||+
T Consensus 253 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~ 315 (342)
T 1b6c_B 253 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE------------Q-----KLRPNIPNRWQSCEALRVMAKIMRECWY 315 (342)
T ss_dssp TBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT------------S-----CCCCCCCGGGGTSHHHHHHHHHHHHHCC
T ss_pred ccCcCCcccccccCccccCcCcccHHHHHHHHHH------------H-----HhCCCCcccccchhHHHHHHHHHHHHhc
Confidence 9 67776543332222222111100 0 0011111112234566789999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhh
Q 037275 964 ESPTERMEMRDVVAKLCRARDTFLG 988 (992)
Q Consensus 964 ~dP~~RPs~~evl~~L~~~~~~~~~ 988 (992)
.||++|||+.||++.|+++.++..-
T Consensus 316 ~dp~~Rps~~~i~~~L~~i~~~~~~ 340 (342)
T 1b6c_B 316 ANGAARLTALRIKKTLSQLSQQEGI 340 (342)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHTTC-
T ss_pred cChhhCCCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999876543
No 188
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.4e-40 Score=358.79 Aligned_cols=271 Identities=23% Similarity=0.345 Sum_probs=190.8
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHh--ccCCcceeEEEEeecccccCcceE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRN--IRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
++|++.+.||+|+||+||+|++ +++.||||++.. .....+.+|.+++.. ++||||+++++++.... ......
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~---~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE--cCcceEEEEecc---cchhhHHHHHHHHHHHhccCcceeeeeeecccCC-Ccccee
Confidence 5899999999999999999987 488999999853 234567788888887 79999999999976532 122367
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeccCCCCCeeeCCCCc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIH--------HHCQPPVVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~ 828 (992)
++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred EEEEeccCCCCHHHHHhcc-------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 9999999999999999653 3788889999999999999999 77 9999999999999999999
Q ss_pred EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC------CcCcccchhhHHHHHHHHHhC--------
Q 037275 829 AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG------EASMTGDVYSFGILLLEMFTR-------- 894 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlG~il~elltg-------- 894 (992)
+||+|||+|+........ .........||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 147 ~kl~DFg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~ 222 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 222 (303)
T ss_dssp C-BCCCCC-CCEETTTTE----ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-
T ss_pred EEEeecCcceeccCCCcc----cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccc
Confidence 999999999766543211 11122334699999999998776 455789999999999999999
Q ss_pred --CCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 037275 895 --RRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM 972 (992)
Q Consensus 895 --~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 972 (992)
+.||...........+. ....... ..+.....+....+....+.+++.+||+.||++|||+
T Consensus 223 ~~~~p~~~~~~~~~~~~~~--------~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 285 (303)
T 3gxj_A 223 DYQLPYYDLVPSDPSVEEM--------RKVVCEQ---------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 285 (303)
T ss_dssp CCCCTTTTTCC-CCCCC-C--------HHHHTTS---------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCH
T ss_pred eeeccccccCCCCccHHHH--------HHHHHHh---------hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCH
Confidence 55554432211111111 0011100 1111112222334567789999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 037275 973 RDVVAKLCRARDTF 986 (992)
Q Consensus 973 ~evl~~L~~~~~~~ 986 (992)
+||++.|+++.+..
T Consensus 286 ~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 286 LRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHHC-CCC-
T ss_pred HHHHHHHHHhhhhc
Confidence 99999999887654
No 189
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=341.11 Aligned_cols=251 Identities=23% Similarity=0.415 Sum_probs=183.2
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++. ..
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 83 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-----DS 83 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE-----CS
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc-----cC
Confidence 3568999999999999999999998899999999996432 234567899999999999999999999964 34
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~d 155 (278)
T 3cok_A 84 NYVYLVLEMCHNGEMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIAD 155 (278)
T ss_dssp SEEEEEEECCTTEEHHHHHHTCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECC
T ss_pred CeEEEEEecCCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEe
Confidence 56799999999999999998643 2589999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||.+....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ...
T Consensus 156 fg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~--- 223 (278)
T 3cok_A 156 FGLATQLKMPH--------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LNK--- 223 (278)
T ss_dssp CTTCEECC------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------
T ss_pred ecceeeccCCC--------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HHH---
Confidence 99998764321 111234689999999999988999999999999999999999999976422210 000
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
. ....+ ..+ .....++.+++.+||+.||++|||++|+++
T Consensus 224 -~------------~~~~~------~~~------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 224 -V------------VLADY------EMP------SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -C------------CSSCC------CCC------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -H------------hhccc------CCc------cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0 00000 000 011345789999999999999999999986
No 190
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-37 Score=343.15 Aligned_cols=282 Identities=22% Similarity=0.339 Sum_probs=207.6
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhc--cCCcceeEEEEeecc
Q 037275 671 YAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNI--RHRNLIKIITICSSI 748 (992)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~ 748 (992)
........++|++.+.||+|+||.||+|++. ++.||||++... ......+|.+++... +||||+++++++...
T Consensus 29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred cccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 3334445678999999999999999999984 899999998533 234455666666555 899999999987653
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeccCCCCCeee
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHC-----QPPVVHGDLKPSNVLL 823 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----~~~ivH~Dlkp~NIll 823 (992)
. ......++||||+++|+|.++++.. .+++..++.++.|++.||+|||++. .++|+||||||+||++
T Consensus 104 ~-~~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill 175 (337)
T 3mdy_A 104 T-GSWTQLYLITDYHENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175 (337)
T ss_dssp C-GGGCEEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE
T ss_pred C-CCCCceEEEEeccCCCcHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE
Confidence 2 2235679999999999999999643 4899999999999999999999761 3389999999999999
Q ss_pred CCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcc------cchhhHHHHHHHHHhC---
Q 037275 824 DQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMT------GDVYSFGILLLEMFTR--- 894 (992)
Q Consensus 824 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------~DiwSlG~il~elltg--- 894 (992)
+.++.+||+|||+++......... ........||+.|+|||++.+..++.+ +|||||||++|||++|
T Consensus 176 ~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~ 251 (337)
T 3mdy_A 176 KKNGTCCIADLGLAVKFISDTNEV----DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS 251 (337)
T ss_dssp CTTSCEEECCCTTCEECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred CCCCCEEEEeCCCceeeccccccc----cCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCc
Confidence 999999999999998765432111 111234569999999999887766655 9999999999999999
Q ss_pred -------CCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCC
Q 037275 895 -------RRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPT 967 (992)
Q Consensus 895 -------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 967 (992)
+.||................ . .....+..........+...++.+++.+||+.||+
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~---------~--------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 314 (337)
T 3mdy_A 252 GGIVEEYQLPYHDLVPSDPSYEDMREI---------V--------CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPA 314 (337)
T ss_dssp TTBCCCCCCTTTTTSCSSCCHHHHHHH---------H--------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGG
T ss_pred ccccccccccHhhhcCCCCchhhhHHH---------H--------hhhccCccccccchhhHHHHHHHHHHHHhhhhChh
Confidence 44544432222211111110 0 00011111112222346677899999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhh
Q 037275 968 ERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 968 ~RPs~~evl~~L~~~~~~~ 986 (992)
+|||++||++.|+++.+..
T Consensus 315 ~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 315 SRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp GSCCHHHHHHHHHHHHHTT
T ss_pred hCCCHHHHHHHHHHHHhhc
Confidence 9999999999999998764
No 191
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.2e-39 Score=368.37 Aligned_cols=249 Identities=24% Similarity=0.316 Sum_probs=193.0
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.++||+|+||.||+|++..+|+.||||+++.. .......+.+|+.+++.++||||+++++++. ...
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-----~~~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-----THD 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE-----ETT
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe-----eCC
Confidence 46799999999999999999999999999999999743 3334566788999999999999999999964 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHH-HCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECC
T ss_pred EEEEEEeeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEcc
Confidence 6799999999999999997543 58999999999999999999998 7 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||+|+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 293 FG~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------- 355 (446)
T 4ejn_A 293 FGLCKEGIKD--------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------- 355 (446)
T ss_dssp CCCCCTTCC-------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------
T ss_pred CCCceeccCC--------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---------
Confidence 9999753321 11223457999999999999999999999999999999999999999753211
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM-----EMRDVVA 977 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 977 (992)
............ .+ .....++.+++.+||+.||++|| |++|+++
T Consensus 356 --------~~~~~i~~~~~~------~p------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 356 --------KLFELILMEEIR------FP------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --------HHHHHHHHCCCC------CC------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --------HHHHHHHhCCCC------CC------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 111111111110 00 01134588999999999999999 9999975
No 192
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=350.95 Aligned_cols=263 Identities=25% Similarity=0.425 Sum_probs=199.4
Q ss_pred cCCCCCCccccccceEEEEeEECCC----CeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGEN----GMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.+|++.+.||+|+||+||+|.+..+ +..||||+++.... .....+.+|+.++++++||||+++++++. ..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-----KY 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe-----cC
Confidence 3567789999999999999987543 34699999964432 23456889999999999999999999964 34
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred CCcEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECC
Confidence 567999999999999999976432 489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 912 (992)
||.++........ ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+....
T Consensus 191 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-------- 257 (333)
T 1mqb_A 191 FGLSRVLEDDPEA-----TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-------- 257 (333)
T ss_dssp CCC----------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------
T ss_pred CCcchhhcccccc-----ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--------
Confidence 9999876543211 111222346789999999999999999999999999999999 99999653211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
+........ .... ........+.+++.+||+.||++||++.|+++.|+++.+...
T Consensus 258 ---------~~~~~~~~~-~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 258 ---------EVMKAINDG-FRLP----------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp ---------HHHHHHHTT-CCCC----------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred ---------HHHHHHHCC-CcCC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 111111000 0000 001123458899999999999999999999999999876543
No 193
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.4e-38 Score=341.65 Aligned_cols=248 Identities=23% Similarity=0.371 Sum_probs=199.5
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+.++++++||||+++++++. ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 82 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-----DAT 82 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe-----cCC
Confidence 468999999999999999999999999999999986432 233567889999999999999999999964 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Df 153 (279)
T 3fdn_A 83 RVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADF 153 (279)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSC
T ss_pred EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEec
Confidence 6799999999999999997643 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|++...... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||......
T Consensus 154 g~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------- 213 (279)
T 3fdn_A 154 GWSVHAPSS----------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ---------- 213 (279)
T ss_dssp CEESCC------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH----------
T ss_pred cccccCCcc----------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH----------
Confidence 998654322 122346899999999999999999999999999999999999999753211
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
+.......... . .+ ......+.+++.+||+.||++|||++|+++.
T Consensus 214 -------~~~~~~~~~~~--~----~~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 214 -------ETYKRISRVEF--T----FP------DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -------HHHHHHHHTCC--C----CC------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -------HHHHHHHhCCC--C----CC------CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01111100000 0 00 0113457899999999999999999999864
No 194
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-38 Score=342.61 Aligned_cols=265 Identities=21% Similarity=0.354 Sum_probs=208.7
Q ss_pred cCCCCCC-ccccccceEEEEeEEC--CCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 679 NDFSSSN-MIGQGSFGFVYKGNLG--ENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 679 ~~~~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
++|.+.+ .||+|+||.||+|.+. .++..||||+++.... ...+.+.+|++++++++||||+++++++. ..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------AE 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------SS
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------CC
Confidence 4566666 9999999999999863 4678899999975432 34567899999999999999999999963 23
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCC
T ss_pred CcEEEEEeCCCCCHHHHHHhCCc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcc
Confidence 46999999999999999975432 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~ 913 (992)
|++........ .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 155 g~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------- 220 (287)
T 1u59_A 155 GLSKALGADDS-----YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------- 220 (287)
T ss_dssp TTCEECTTCSC-----EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---------
T ss_pred cceeeeccCcc-----eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---------
Confidence 99987754321 1111223357899999999988889999999999999999998 99999763221
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhcc
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGRM 990 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 990 (992)
.....+.. ... . .. ......++.+++.+||+.||++|||+.|+++.|+++..+.....
T Consensus 221 -----~~~~~i~~---~~~-~----~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 221 -----EVMAFIEQ---GKR-M----EC------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp -----HHHHHHHT---TCC-C----CC------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred -----HHHHHHhc---CCc-C----CC------CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 01111110 000 0 00 01123468899999999999999999999999999988776543
No 195
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.2e-38 Score=341.66 Aligned_cols=255 Identities=30% Similarity=0.393 Sum_probs=199.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|++ +|+.||||+++.. ...+.+.+|+.++++++||||+++++++.. .....+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCCceE
Confidence 46899999999999999999998 4889999998633 355778999999999999999999998643 334569
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEecCCCCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccc
Confidence 99999999999999976532 2488999999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
....... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 165 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~------- 224 (278)
T 1byg_A 165 KEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VV------- 224 (278)
T ss_dssp ----------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HH-------
T ss_pred ccccccc-----------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HH-------
Confidence 7544221 12246889999999988899999999999999999998 999997532210 00
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
..+.. ...... .......+.+++.+||+.||++|||+.|+++.|++++...
T Consensus 225 -----~~~~~----~~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 225 -----PRVEK----GYKMDA----------PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp -----HHHTT----TCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----HHHhc----CCCCCC----------cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00000 000000 0112346889999999999999999999999999997654
No 196
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-38 Score=348.75 Aligned_cols=265 Identities=20% Similarity=0.258 Sum_probs=198.1
Q ss_pred HHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC---chhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 675 SKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG---ASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
....++|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|+.++++++||||+++++++..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~---- 105 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI---- 105 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE----
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee----
Confidence 34467899999999999999999999889999999999644322 23678899999999999999999999643
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEE
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHL 831 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 831 (992)
....++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 106 -~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl 175 (309)
T 2h34_A 106 -DGQLYVDMRLINGVDLAAMLRRQG------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYL 175 (309)
T ss_dssp -TTEEEEEEECCCCEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred -CCeEEEEEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEE
Confidence 456799999999999999997543 489999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+|||++....... ........|++.|+|||++.+..++.++||||||+++|||++|+.||.+.... .....
T Consensus 176 ~Dfg~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~ 246 (309)
T 2h34_A 176 VDFGIASATTDEK-------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAH 246 (309)
T ss_dssp CSCCC-----------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHH
T ss_pred ecCccCccccccc-------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHH
Confidence 9999997654321 11122346899999999999999999999999999999999999999753211 00000
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHhh
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM-EMRDVVAKLCRARDTF 986 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 986 (992)
.....+. ..........++.+++.+||+.||++|| |++++++.|+++.+..
T Consensus 247 ~~~~~~~------------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 247 INQAIPR------------------------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp HHSCCCC------------------------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred hccCCCC------------------------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0000000 0000011234588999999999999999 9999999998876543
No 197
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.4e-38 Score=338.64 Aligned_cols=257 Identities=23% Similarity=0.320 Sum_probs=202.1
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC------CchhHHHHHHHHHHhccCCcceeEEEEeecccccC
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK------GASNGFVAECQALRNIRHRNLIKIITICSSIDFKG 752 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 752 (992)
++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++. .
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~ 79 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE-----N 79 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----C
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec-----C
Confidence 478999999999999999999998999999999874432 13567899999999999999999999964 3
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC----c
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL----V 828 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~ 828 (992)
....++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 80 KTDVVLILELVSGGELFDFLAEKE------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCC
T ss_pred CCeEEEEEeecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCc
Confidence 456799999999999999997533 589999999999999999999999 999999999999998877 8
Q ss_pred EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccH
Q 037275 829 AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTL 908 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~ 908 (992)
+||+|||.+....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.+..... ..
T Consensus 151 ~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~ 220 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGN---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TL 220 (283)
T ss_dssp EEECCCTTCEECC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HH
T ss_pred eEEEecccceeccCCC---------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HH
Confidence 9999999998764321 1223458999999999999999999999999999999999999997632110 00
Q ss_pred HHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHHH
Q 037275 909 HEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA--KLCRAR 983 (992)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~ 983 (992)
.......... . ..........+.+++.+||+.||++|||+.|+++ .++.++
T Consensus 221 ~~~~~~~~~~-~-----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 221 TNISAVNYDF-D-----------------------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp HHHHTTCCCC-C-----------------------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred HHhHhcccCC-c-----------------------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0000000000 0 0000112345889999999999999999999997 344443
No 198
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=349.33 Aligned_cols=271 Identities=20% Similarity=0.261 Sum_probs=195.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-CCcceeEEEEeeccc---ccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR-HRNLIKIITICSSID---FKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~---~~~~ 753 (992)
..+|++.++||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++.... ....
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 357999999999999999999999899999999987665555677899999999996 999999999975322 2445
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeccCCCCCeeeCCCCcEEE
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPP--VVHGDLKPSNVLLDQDLVAHL 831 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl 831 (992)
...++||||+. |+|.+++..... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES---RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT---TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 66899999995 799999876432 23589999999999999999999999 8 999999999999999999999
Q ss_pred eecccceecCCCCCCCCcc----cCCCCCcccccccccccccc---cCCCcCcccchhhHHHHHHHHHhCCCCCCCCccC
Q 037275 832 GDFGLAKFLSSSPLDTAVE----TPSSSKGIKGTVGYIAPEYG---MGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQ 904 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 904 (992)
+|||+++............ .........||+.|+|||++ .+..++.++|||||||++|+|++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 9999998765432111000 00111234689999999998 5667899999999999999999999999653211
Q ss_pred CccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 037275 905 GLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARD 984 (992)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 984 (992)
. .... ......... ....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 260 ~-----------------~~~~----~~~~~~~~~----------~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 260 R-----------------IVNG----KYSIPPHDT----------QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ---------------------------CCCCTTCC----------SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-----------------hhcC----cccCCcccc----------cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 0000 000000000 11237789999999999999999999999999876
Q ss_pred hh
Q 037275 985 TF 986 (992)
Q Consensus 985 ~~ 986 (992)
..
T Consensus 309 ~~ 310 (337)
T 3ll6_A 309 AR 310 (337)
T ss_dssp HT
T ss_pred cc
Confidence 54
No 199
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.6e-38 Score=359.52 Aligned_cols=200 Identities=23% Similarity=0.311 Sum_probs=171.9
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhc------cCCcceeEEEEeeccccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNI------RHRNLIKIITICSSIDFK 751 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 751 (992)
..+|++.++||+|+||+||+|.+..+++.||||+++.. ......+.+|+.+++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~---- 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF---- 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc----
Confidence 45799999999999999999999989999999999632 22345678899888887 57799999998643
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc--E
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV--A 829 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~ 829 (992)
....++||||+. ++|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +
T Consensus 171 -~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 171 -RNHICMTFELLS-MNLYELIKKNKF----QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp -TTEEEEEECCCC-CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCE
T ss_pred -CCeEEEEEeccC-CCHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcce
Confidence 456799999995 699999986543 2589999999999999999999999 9999999999999999987 9
Q ss_pred EEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCc
Q 037275 830 HLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMF 902 (992)
Q Consensus 830 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 902 (992)
||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|++||.+..
T Consensus 242 kL~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 242 KVIDFGSSCYEHQR-----------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp EECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEeecccceecCCc-----------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 99999999765432 123468999999999999999999999999999999999999998753
No 200
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-38 Score=350.83 Aligned_cols=276 Identities=23% Similarity=0.333 Sum_probs=195.3
Q ss_pred HHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-----CchhHHHHHHHHHHhccCCcceeEEEEeecc
Q 037275 674 LSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-----GASNGFVAECQALRNIRHRNLIKIITICSSI 748 (992)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 748 (992)
+....++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+.++++++||||+++++++.
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-- 82 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG-- 82 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe--
Confidence 34456789999999999999999999988999999999964322 12356889999999999999999999964
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 828 (992)
.....++||||+++ +|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 83 ---~~~~~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~ 150 (346)
T 1ua2_A 83 ---HKSNISLVFDFMET-DLEVIIKDNSL-----VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGV 150 (346)
T ss_dssp ---CTTCCEEEEECCSE-EHHHHHTTCCS-----SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCC
T ss_pred ---eCCceEEEEEcCCC-CHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCC
Confidence 34556999999976 89998876432 488889999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCccCCcc
Q 037275 829 AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLT 907 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~ 907 (992)
+||+|||+++...... .......||+.|+|||++.+. .++.++|||||||++|||++|.+||.+..... .
T Consensus 151 ~kl~Dfg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~ 221 (346)
T 1ua2_A 151 LKLADFGLAKSFGSPN--------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-Q 221 (346)
T ss_dssp EEECCCGGGSTTTSCC--------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred EEEEecccceeccCCc--------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-H
Confidence 9999999998654321 122334689999999998764 58899999999999999999999987642211 1
Q ss_pred HHHHHhhh-CC--hhHHHHHHhhHhHhhhccCCCCCCccc--cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 908 LHEFARTA-LP--DKVMEIVDSVLLLEVQASNSRSCGDER--LRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 908 ~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+....... .+ +.+.+... ..++ .......... ........++.+++.+||+.||++|||++|+++
T Consensus 222 ~~~i~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 222 LTRIFETLGTPTEEQWPDMCS---LPDY--VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp HHHHHHHHCCCCTTTSSSTTS---STTC--CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHHHHcCCCChhhhhhhcc---Cccc--ccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 11111100 00 00000000 0000 0000000000 000122356899999999999999999999986
No 201
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.3e-38 Score=352.70 Aligned_cols=278 Identities=22% Similarity=0.347 Sum_probs=200.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCc--hhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGA--SNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||.||+|++..+++.||||++....... .+.+.+|+.++++++||||+++++++. ....
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-----KKKR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-----cCCE
Confidence 458999999999999999999999899999999986443322 355789999999999999999999964 3456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++++|.++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPN------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCcchHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 799999999999988866433 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
.++...... .......||+.|+|||++.+. .++.++||||+||++|+|++|+.||.+...... .......
T Consensus 170 ~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~ 240 (331)
T 4aaa_A 170 FARTLAAPG--------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMC 240 (331)
T ss_dssp TC--------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH
T ss_pred CceeecCCc--------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHH
Confidence 998654321 112234689999999998775 789999999999999999999999986433211 1111111
Q ss_pred --hCChhHHHHHHhhHh-HhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 915 --ALPDKVMEIVDSVLL-LEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 915 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
............... ........................+.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 111111111111100 0000000000000000011234668999999999999999999999863
No 202
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.7e-38 Score=343.32 Aligned_cols=264 Identities=25% Similarity=0.356 Sum_probs=206.0
Q ss_pred HhcCCCCCC-ccccccceEEEEeEE--CCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 677 ATNDFSSSN-MIGQGSFGFVYKGNL--GENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 677 ~~~~~~~~~-~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
..++|++.+ .||+|+||+||+|.+ ..+++.||||+++.... ...+.+.+|+.+++.++||||+++++++.
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 88 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE----- 88 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-----
Confidence 345788888 999999999999954 55678999999974432 23567899999999999999999999862
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEE
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHL 831 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 831 (992)
....++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 89 -~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl 158 (291)
T 1xbb_A 89 -AESWMLVMEMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKI 158 (291)
T ss_dssp -SSSEEEEEECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEE
T ss_pred -CCCcEEEEEeCCCCCHHHHHHhCc------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEE
Confidence 234689999999999999997643 489999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHE 910 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~ 910 (992)
+|||++......... ........+++.|+|||++.+..++.++||||||+++|+|++ |+.||.+.... +
T Consensus 159 ~Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~ 228 (291)
T 1xbb_A 159 SDFGLSKALRADENY-----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----E 228 (291)
T ss_dssp CCCTTCEECCTTCSE-----EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----H
T ss_pred ccCCcceeeccCCCc-----ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----H
Confidence 999999876543211 111122346789999999988889999999999999999999 99999763211 0
Q ss_pred HHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhh
Q 037275 911 FARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLG 988 (992)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 988 (992)
....+.. ... ...+ ......+.+++.+||+.||++|||+.|+++.|+++.....+
T Consensus 229 ---------~~~~~~~---~~~-----~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 229 ---------VTAMLEK---GER-----MGCP------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp ---------HHHHHHT---TCC-----CCCC------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHc---CCC-----CCCC------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 1111110 000 0000 11234688999999999999999999999999998876654
No 203
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.4e-37 Score=348.33 Aligned_cols=259 Identities=22% Similarity=0.366 Sum_probs=203.8
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC--------chhHHHHHHHHHHhc-cCCcceeE
Q 037275 671 YAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG--------ASNGFVAECQALRNI-RHRNLIKI 741 (992)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~~ 741 (992)
+.......++|++.+.||+|+||.||+|++..+|+.||||+++..... ..+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 334455667899999999999999999999888999999999754321 134678899999999 79999999
Q ss_pred EEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCe
Q 037275 742 ITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNV 821 (992)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 821 (992)
++++. .....++||||+++++|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||
T Consensus 166 ~~~~~-----~~~~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NI 231 (365)
T 2y7j_A 166 IDSYE-----SSSFMFLVFDLMRKGELFDYLTEKV------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENI 231 (365)
T ss_dssp EEEEE-----BSSEEEEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred EEEEe-----eCCEEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence 99864 3456799999999999999997542 589999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC------CCcCcccchhhHHHHHHHHHhCC
Q 037275 822 LLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG------GEASMTGDVYSFGILLLEMFTRR 895 (992)
Q Consensus 822 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~ 895 (992)
+++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+
T Consensus 232 l~~~~~~ikl~DfG~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~ 302 (365)
T 2y7j_A 232 LLDDNMQIRLSDFGFSCHLEPGE---------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS 302 (365)
T ss_dssp EECTTCCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSS
T ss_pred EECCCCCEEEEecCcccccCCCc---------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCC
Confidence 99999999999999998765321 1233568999999998753 36889999999999999999999
Q ss_pred CCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 037275 896 RPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDV 975 (992)
Q Consensus 896 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 975 (992)
.||...... . .........+.. ...........+.+++.+||+.||++|||++|+
T Consensus 303 ~pf~~~~~~-----~------------~~~~i~~~~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el 357 (365)
T 2y7j_A 303 PPFWHRRQI-----L------------MLRMIMEGQYQF--------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357 (365)
T ss_dssp CSSCCSSHH-----H------------HHHHHHHTCCCC--------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCCCCHH-----H------------HHHHHHhCCCCC--------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 999753111 0 000000000000 000000123458899999999999999999999
Q ss_pred HH
Q 037275 976 VA 977 (992)
Q Consensus 976 l~ 977 (992)
++
T Consensus 358 l~ 359 (365)
T 2y7j_A 358 LQ 359 (365)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 204
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=354.39 Aligned_cols=252 Identities=25% Similarity=0.372 Sum_probs=191.4
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC--chhHHHHHHHHHHhccC--CcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG--ASNGFVAECQALRNIRH--RNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.+.||+|+||+||+|.+. +++.||||++...... ..+.+.+|+.++++++| |||+++++++. ..
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-----~~ 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----TD 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CS
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe-----eC
Confidence 357899999999999999999985 7899999999754332 33678999999999976 99999999964 44
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
...++|||+ .+|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|
T Consensus 82 ~~~~lv~e~-~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~D 150 (343)
T 3dbq_A 82 QYIYMVMEC-GNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 150 (343)
T ss_dssp SEEEEEECC-CSEEHHHHHHHSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECC
T ss_pred CEEEEEEeC-CCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEee
Confidence 567999995 5889999998643 589999999999999999999999 999999999999996 67899999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccC-----------CCcCcccchhhHHHHHHHHHhCCCCCCCCc
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-----------GEASMTGDVYSFGILLLEMFTRRRPTDGMF 902 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltg~~pf~~~~ 902 (992)
||+++...... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 151 FG~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 224 (343)
T 3dbq_A 151 FGIANQMQPDT------TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224 (343)
T ss_dssp CSSSCCC------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccccccCccc------ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence 99998765322 1112234569999999999864 678999999999999999999999997532
Q ss_pred cCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 903 NQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
+.... ....++. .... ..+. ....++.+++.+||+.||++|||+.|+++.
T Consensus 225 ~~~~~------------~~~~~~~----~~~~----~~~~------~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 225 NQISK------------LHAIIDP----NHEI----EFPD------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp SHHHH------------HHHHHCT----TSCC----CCCC------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hHHHH------------HHHHhcC----Cccc----CCcc------cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 21100 1111110 0000 0000 012357899999999999999999999864
No 205
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3e-38 Score=345.33 Aligned_cols=251 Identities=22% Similarity=0.294 Sum_probs=199.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||+||+|++..+|+.||+|+++.........+.+|+.++++++||||+++++++. .....+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE-----STTHYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcc-----cCCEEE
Confidence 457999999999999999999999899999999997555445567899999999999999999999864 445679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee---CCCCcEEEeec
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL---DQDLVAHLGDF 834 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Df 834 (992)
+||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 83 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 83 LVMQLVSGGELFDRILERG------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp EEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred EEEEcCCCccHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccC
Confidence 9999999999999997543 489999999999999999999999 99999999999999 78899999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|.+...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||......
T Consensus 154 g~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------- 213 (304)
T 2jam_A 154 GLSKMEQNG----------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES---------- 213 (304)
T ss_dssp STTCCCCCB----------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH----------
T ss_pred CcceecCCC----------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH----------
Confidence 998754321 122345899999999999999999999999999999999999999753211
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.........+.. . .........++.+++.+||+.||++|||++|+++
T Consensus 214 -------~~~~~i~~~~~~~--~------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 214 -------KLFEKIKEGYYEF--E------SPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp -------HHHHHHHHCCCCC--C------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred -------HHHHHHHcCCCCC--C------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111111110000 0 0000112346889999999999999999999986
No 206
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.1e-37 Score=356.15 Aligned_cols=359 Identities=19% Similarity=0.205 Sum_probs=177.1
Q ss_pred cCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccc
Q 037275 66 LSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYN 145 (992)
Q Consensus 66 l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~ 145 (992)
.+..++++++|++|+|++|.+++ +| .++.+++|++|+|++|++++ +| ++.+++|++|++++|++++ +|
T Consensus 34 ~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~------ 101 (457)
T 3bz5_A 34 DTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD------ 101 (457)
T ss_dssp SEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC------
T ss_pred cccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee------
Confidence 33455566666666666666663 44 46666666666666666663 33 5556666666666655552 22
Q ss_pred ccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEe
Q 037275 146 WLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVF 225 (992)
Q Consensus 146 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 225 (992)
++++++|++|++++|++.+ +| ++.+++|++|++++|++++. + +..+++|++|+
T Consensus 102 ---------------------~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~ 154 (457)
T 3bz5_A 102 ---------------------VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELD 154 (457)
T ss_dssp ---------------------CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEE
T ss_pred ---------------------cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEE
Confidence 4444445555555554433 22 44555555555555555532 2 44455555555
Q ss_pred ccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCC
Q 037275 226 LPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLG 305 (992)
Q Consensus 226 l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 305 (992)
+++|+..+.+ .++.+++|++|++++|++++.. +..+++|+.|++++|+++
T Consensus 155 l~~n~~~~~~---------------------------~~~~l~~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 155 CHLNKKITKL---------------------------DVTPQTQLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNIT 204 (457)
T ss_dssp CTTCSCCCCC---------------------------CCTTCTTCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCS
T ss_pred CCCCCccccc---------------------------ccccCCcCCEEECCCCccceec---cccCCCCCEEECcCCcCC
Confidence 5555332211 1223344444444444444321 444444555555555444
Q ss_pred CCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCC
Q 037275 306 TGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTG 385 (992)
Q Consensus 306 ~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (992)
.++ +..+++|+.|++++|++.+ +| +..+ ++|+.|++++|++++.. +..+++|+.|++++|
T Consensus 205 ~~~---------l~~l~~L~~L~Ls~N~l~~-ip--~~~l-~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n---- 264 (457)
T 3bz5_A 205 KLD---------LNQNIQLTFLDCSSNKLTE-ID--VTPL-TQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT---- 264 (457)
T ss_dssp CCC---------CTTCTTCSEEECCSSCCSC-CC--CTTC-TTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC----
T ss_pred eec---------cccCCCCCEEECcCCcccc-cC--cccc-CCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC----
Confidence 321 2233333444433333332 11 1111 11233333333333221 122334444444433
Q ss_pred CCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhh
Q 037275 386 TIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILS 465 (992)
Q Consensus 386 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 465 (992)
+|+.|++++|.+.+.+| +..+++|+.|++++|.+.+.+|. ...+|+.|
T Consensus 265 ----------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L----------------- 312 (457)
T 3bz5_A 265 ----------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITEL----------------- 312 (457)
T ss_dssp ----------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCC-----------------
T ss_pred ----------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEe-----------------
Confidence 23334444444443333 23444455555555544433332 11222222
Q ss_pred hcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEE
Q 037275 466 ISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKEL 545 (992)
Q Consensus 466 ~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 545 (992)
+++ .+++|++|++++|++++. + ++.+++|+.|++++|+|++ ++.|..|
T Consensus 313 --------~l~-------------~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L 360 (457)
T 3bz5_A 313 --------DLS-------------QNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKI 360 (457)
T ss_dssp --------CCT-------------TCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGS
T ss_pred --------chh-------------hcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccc
Confidence 222 335677777777777763 2 6777777777777777764 2455666
Q ss_pred ECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 546 DMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 546 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
++++|+++|. ..+..|+.+++++|+++|.+|.
T Consensus 361 ~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 361 PALNNNFEAE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp SGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred cccCCcEEec-----ceeeecCccccccCcEEEEcCh
Confidence 7777777754 3455677777777777777664
No 207
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.2e-39 Score=356.40 Aligned_cols=274 Identities=22% Similarity=0.363 Sum_probs=211.6
Q ss_pred HHHHHhcCCCCCCccccccceEEEEeEEC-----CCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEee
Q 037275 673 ELSKATNDFSSSNMIGQGSFGFVYKGNLG-----ENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICS 746 (992)
Q Consensus 673 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 746 (992)
+.....++|++.+.||+|+||.||+|++. .+++.||+|++..... .....+.+|+.++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 34445678999999999999999999875 3578899999864332 23456889999999999999999999964
Q ss_pred cccccCcceEEEEEEeccCCCHHHHHhhcccch----hhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCee
Q 037275 747 SIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQ----EARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVL 822 (992)
Q Consensus 747 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 822 (992)
. ....++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 99 ~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIl 170 (322)
T 1p4o_A 99 Q-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170 (322)
T ss_dssp S-----SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred c-----CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEE
Confidence 3 445699999999999999998654211 113568999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCC
Q 037275 823 LDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGM 901 (992)
Q Consensus 823 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~ 901 (992)
++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++||||+||++|+|++ |+.||.+.
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDY------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGC------EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred EcCCCeEEECcCccccccccccc------cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 99999999999999986543211 111223357889999999998899999999999999999999 89998753
Q ss_pred ccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 037275 902 FNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCR 981 (992)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 981 (992)
... + ........... .. .......+.+++.+||+.||++|||+.|+++.|++
T Consensus 245 ~~~-----~------------~~~~~~~~~~~-----~~------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 245 SNE-----Q------------VLRFVMEGGLL-----DK------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp CHH-----H------------HHHHHHTTCCC-----CC------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred CHH-----H------------HHHHHHcCCcC-----CC------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 211 1 11111100000 00 01123458899999999999999999999999998
Q ss_pred HHHhhhh
Q 037275 982 ARDTFLG 988 (992)
Q Consensus 982 ~~~~~~~ 988 (992)
+.+....
T Consensus 297 ~~~~~~~ 303 (322)
T 1p4o_A 297 EMEPGFR 303 (322)
T ss_dssp GSCTTHH
T ss_pred hhccCCc
Confidence 7665443
No 208
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=8.7e-38 Score=350.88 Aligned_cols=288 Identities=19% Similarity=0.239 Sum_probs=205.2
Q ss_pred cHHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCc-----------hhHHHHHHHHHHhccCCcc
Q 037275 670 SYAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGA-----------SNGFVAECQALRNIRHRNL 738 (992)
Q Consensus 670 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~ni 738 (992)
...++....++|++.+.||+|+||.||+|.+. +++.||||++....... .+.+.+|+.++++++||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 35677888999999999999999999999986 59999999986432211 2678999999999999999
Q ss_pred eeEEEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCC
Q 037275 739 IKIITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKP 818 (992)
Q Consensus 739 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp 818 (992)
+++++++...+.......++||||++ |+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 162 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-----IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHP 162 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCCh
Confidence 99999986655455667899999997 68988887543 2589999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCC
Q 037275 819 SNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRP 897 (992)
Q Consensus 819 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p 897 (992)
+||+++.++.+||+|||.++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.|
T Consensus 163 ~NIl~~~~~~~kl~Dfg~~~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 233 (362)
T 3pg1_A 163 GNILLADNNDITICDFNLAREDTAD---------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233 (362)
T ss_dssp GGEEECTTCCEEECCTTC------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred HHEEEcCCCCEEEEecCcccccccc---------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCC
Confidence 9999999999999999999754322 12233468999999998877 6789999999999999999999999
Q ss_pred CCCCccCCccHHHHHhhhCChhHHHHH--HhhHhHhhhccCCCCCCccc--cchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 037275 898 TDGMFNQGLTLHEFARTALPDKVMEIV--DSVLLLEVQASNSRSCGDER--LRTEERLVAVVETGVVCSMESPTERMEMR 973 (992)
Q Consensus 898 f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 973 (992)
|.+..... .................. .......+............ .........+.+++.+||+.||++|||++
T Consensus 234 f~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 312 (362)
T 3pg1_A 234 FRGSTFYN-QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312 (362)
T ss_dssp CCCSSHHH-HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCHHH-HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHH
Confidence 98643211 111111111111111110 00000000000000000000 00112245688999999999999999999
Q ss_pred HHHH
Q 037275 974 DVVA 977 (992)
Q Consensus 974 evl~ 977 (992)
|+++
T Consensus 313 ell~ 316 (362)
T 3pg1_A 313 QALR 316 (362)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9985
No 209
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.7e-38 Score=349.16 Aligned_cols=282 Identities=23% Similarity=0.355 Sum_probs=204.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccc---cC
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDF---KG 752 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 752 (992)
.++|++.++||+|+||+||+|++..+|+.||||++..... .....+.+|+.+++.++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 4689999999999999999999998999999999864432 234578899999999999999999999865321 11
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEe
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLG 832 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 832 (992)
....++||||+++ ++.+.+..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred CceEEEEEeccCC-CHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEc
Confidence 4567999999975 88888765432 489999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
|||+|+.+...... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..... .....
T Consensus 167 Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i 241 (351)
T 3mi9_A 167 DFGLARAFSLAKNS----QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALI 241 (351)
T ss_dssp CCTTCEECCCCSSS----SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred cchhcccccccccc----cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH
Confidence 99999876532211 1222334568999999998876 468999999999999999999999998643221 11111
Q ss_pred Hhh--hCChhHHHHHHhhHhHhhhccCCCCCCccccchHH------HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 912 ART--ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEE------RLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 912 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
... ..+.......+... .+. .............+ ....+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 242 SQLCGSITPEVWPNVDNYE--LYE--KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHHCCCCTTTSTTGGGCG--GGT--SSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhCCCChhhccccccch--hhc--ccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 110 01111000000000 000 00000000001111 1345889999999999999999999986
No 210
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.9e-39 Score=363.24 Aligned_cols=260 Identities=15% Similarity=0.162 Sum_probs=193.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHH---HHHhccCCcceeEE-------EE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQ---ALRNIRHRNLIKII-------TI 744 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~~ 744 (992)
.++|++.+.||+|+||+||+|++..+|+.||||++... .....+.+.+|+. ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999999888999999999743 3344577899994 55555899999998 44
Q ss_pred eecccc-------cCcc-----eEEEEEEeccCCCHHHHHhhcccchh-hcccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 037275 745 CSSIDF-------KGVD-----FQAIVYEYMQNGSLEDWLHQSEDQQE-ARSLTLIQRINIIIDVASAIEYIHHHCQPPV 811 (992)
Q Consensus 745 ~~~~~~-------~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 811 (992)
+..... .+.. ..++||||+ +|+|.+++.......+ ...+++..++.++.|++.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 332110 0111 368999999 6899999986542211 23455688999999999999999999 99
Q ss_pred EeccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC-----------CcCcccc
Q 037275 812 VHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-----------EASMTGD 880 (992)
Q Consensus 812 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~D 880 (992)
+||||||+||+++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++|
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D 295 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFD 295 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----------cccCCCC-cCccChhhhcccccccccccccccCChhhh
Confidence 9999999999999999999999999985332 1123457 999999999887 8999999
Q ss_pred hhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhh
Q 037275 881 VYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVV 960 (992)
Q Consensus 881 iwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 960 (992)
||||||++|||++|+.||.+........ .... ... ....++.+++.+
T Consensus 296 vwSlG~il~elltg~~Pf~~~~~~~~~~-----------------~~~~------~~~----------~~~~~~~~li~~ 342 (377)
T 3byv_A 296 AWALGLVIYWIWCADLPITKDAALGGSE-----------------WIFR------SCK----------NIPQPVRALLEG 342 (377)
T ss_dssp HHHHHHHHHHHHHSSCCC------CCSG-----------------GGGS------SCC----------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCcccccccchh-----------------hhhh------hcc----------CCCHHHHHHHHH
Confidence 9999999999999999997643221100 0000 000 112458899999
Q ss_pred ccCCCCCCCCCHHHHHH--HHHHHHHhh
Q 037275 961 CSMESPTERMEMRDVVA--KLCRARDTF 986 (992)
Q Consensus 961 cl~~dP~~RPs~~evl~--~L~~~~~~~ 986 (992)
||+.||++|||+.|+++ .++++.+..
T Consensus 343 ~L~~dp~~Rpt~~e~l~hp~f~~~~~~~ 370 (377)
T 3byv_A 343 FLRYPKEDRLLPLQAMETPEYEQLRTEL 370 (377)
T ss_dssp HTCSSGGGCCCHHHHHTSHHHHHHHHHH
T ss_pred HcCCCchhCCCHHHHhhChHHHHHHHHH
Confidence 99999999999999986 455554443
No 211
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.7e-38 Score=341.81 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=196.7
Q ss_pred CCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEEEE
Q 037275 680 DFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQAIV 759 (992)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 759 (992)
+|....+||+|+||.||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++.. ....++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-----NGFIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-----CCcEEEE
Confidence 45555699999999999999988999999999986666667789999999999999999999999643 4567999
Q ss_pred EEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC-CCcEEEeecccce
Q 037275 760 YEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ-DLVAHLGDFGLAK 838 (992)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~ 838 (992)
|||+++++|.+++..... ...+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||.+.
T Consensus 98 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EECCSEEEHHHHHHHTTC---CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEeCCCCCHHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 999999999999986532 23467889999999999999999999 9999999999999987 8999999999998
Q ss_pred ecCCCCCCCCcccCCCCCcccccccccccccccCCC--cCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhC
Q 037275 839 FLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGE--ASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
...... .......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||........
T Consensus 172 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------- 233 (295)
T 2clq_A 172 RLAGIN--------PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA---------- 233 (295)
T ss_dssp ESCC-------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH----------
T ss_pred ccCCCC--------CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH----------
Confidence 764321 1122346899999999987653 78999999999999999999999964321100
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
....... .... .... .....++.+++.+||+.||++|||++|+++
T Consensus 234 -----~~~~~~~-~~~~----~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 234 -----AMFKVGM-FKVH----PEIP------ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -----HHHHHHH-HCCC----CCCC------TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -----HHHhhcc-cccc----cccc------ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000 0000 0000 112345889999999999999999999975
No 212
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.4e-38 Score=359.87 Aligned_cols=277 Identities=22% Similarity=0.287 Sum_probs=198.7
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccc-cCcceEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDF-KGVDFQA 757 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~ 757 (992)
.+|++.++||+|+||+||+|++..+|+.||||++..... ...+|++++++++||||+++++++..... .+..+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 368899999999999999999998999999999864322 23479999999999999999998754322 3345567
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC-CcEEEeeccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD-LVAHLGDFGL 836 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~ 836 (992)
+||||+++ ++.+.+..... ....+++..++.++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 130 lv~e~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSR--AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eehhcccc-cHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 99999975 77776654321 134689999999999999999999999 99999999999999965 5789999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.... ..+.+.....
T Consensus 204 a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~l 273 (420)
T 1j1b_A 204 AKQLVRGE---------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVL 273 (420)
T ss_dssp CEECCTTC---------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred hhhcccCC---------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh
Confidence 98764321 12234689999999998765 7999999999999999999999999874322 1122222211
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccc---cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDER---LRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
....... +... ...+............ ........++.+++.+||+.||++|||+.|+++
T Consensus 274 g~p~~~~-~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 274 GTPTREQ-IREM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CSCCHHH-HHHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCHHH-HHhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 1111011 1000 0000000000000000 000112356899999999999999999999985
No 213
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1e-37 Score=363.77 Aligned_cols=252 Identities=27% Similarity=0.337 Sum_probs=201.0
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc--CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK--QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.++||+|+||+||+|++..+++.||||++... .......+.+|+.++++++||||+++++++. ....
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~ 95 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----DSSS 95 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE-----cCCE
Confidence 45799999999999999999999989999999998643 2345677899999999999999999999964 4566
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC---CCCcEEEe
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD---QDLVAHLG 832 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~ 832 (992)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 166 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKII 166 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEE
Confidence 799999999999999987643 489999999999999999999999 999999999999995 55689999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
|||+|+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||.+....
T Consensus 167 Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------- 228 (486)
T 3mwu_A 167 DFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-------- 228 (486)
T ss_dssp SCSCTTTBCCC-------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------
T ss_pred ECCcCeECCCCC---------ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------
Confidence 999998654321 1233469999999999875 5899999999999999999999999763211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
+.+.......+.. ..........++.+++.+||+.||++|||+.|+++.
T Consensus 229 ---------~~~~~i~~~~~~~--------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 229 ---------DILKRVETGKYAF--------DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ---------HHHHHHHHTCCCS--------CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ---------HHHHHHHhCCCCC--------CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111111100 000111223458899999999999999999999873
No 214
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.1e-38 Score=363.88 Aligned_cols=256 Identities=24% Similarity=0.366 Sum_probs=204.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.++||+|+||+||+|++..+|+.||+|++... .......+.+|+.++++++||||+++++++. ...
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~-----~~~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE-----TKT 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-----eCC
Confidence 36789999999999999999999989999999999643 2334567889999999999999999999853 456
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDED--NPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTT--SCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEeccCCCHHHHHHHhhcc--cccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 679999999999999999765321 23589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ...+
T Consensus 334 Gla~~~~~~~--------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~---- 400 (543)
T 3c4z_A 334 GLAVELKAGQ--------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKE---- 400 (543)
T ss_dssp TTCEECCTTC--------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHH----
T ss_pred ceeeeccCCC--------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHH----
Confidence 9998765321 11233579999999999999999999999999999999999999998643221 1111
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH-----HHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM-----RDVV 976 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl 976 (992)
+......... ..+ ......+.+++.+||+.||++||++ +||+
T Consensus 401 --------~~~~i~~~~~------~~p------~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~ 447 (543)
T 3c4z_A 401 --------LKQRVLEQAV------TYP------DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLR 447 (543)
T ss_dssp --------HHHHHHHCCC------CCC------TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHH
T ss_pred --------HHHHHhhccc------CCC------cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHH
Confidence 1111111000 000 1123458899999999999999975 5665
No 215
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.9e-38 Score=346.80 Aligned_cols=264 Identities=25% Similarity=0.395 Sum_probs=205.2
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEE--EEEEeecc-CCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCcc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMV--AVKVINLK-QKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 754 (992)
++|++.+.||+|+||.||+|++..++..+ |+|.++.. .....+.+.+|+++++++ +||||+++++++. ...
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE-----ETT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeee-----eCC
Confidence 58999999999999999999998788755 99988643 234456789999999999 8999999999964 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccc----------hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQ----------QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD 824 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 824 (992)
..++||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 679999999999999999865411 1123689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCcc
Q 037275 825 QDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFN 903 (992)
Q Consensus 825 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~ 903 (992)
.++.+||+|||+++..... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.+...
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~ 247 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 247 (327)
T ss_dssp GGGCEEECCTTCEESSCEE---------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred CCCeEEEcccCcCcccccc---------ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH
Confidence 9999999999999743211 11222346889999999988889999999999999999998 9999976321
Q ss_pred CCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 037275 904 QGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRAR 983 (992)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 983 (992)
. + ....... ...... ......++.+++.+||+.||++|||++|+++.|+++.
T Consensus 248 ~-----~------------~~~~~~~-~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 248 A-----E------------LYEKLPQ-GYRLEK----------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp H-----H------------HHHHGGG-TCCCCC----------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H-----H------------HHHHhhc-CCCCCC----------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1 1 1111100 000000 0112345889999999999999999999999999987
Q ss_pred Hhhh
Q 037275 984 DTFL 987 (992)
Q Consensus 984 ~~~~ 987 (992)
+...
T Consensus 300 ~~~~ 303 (327)
T 1fvr_A 300 EERK 303 (327)
T ss_dssp HSSS
T ss_pred Hhhc
Confidence 7543
No 216
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=8e-38 Score=365.28 Aligned_cols=252 Identities=23% Similarity=0.316 Sum_probs=197.4
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.++||+|+||+||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++. ....
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE-----DKRN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCE
Confidence 347999999999999999999999999999999997443 334577899999999999999999999964 4556
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC---CcEEEe
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD---LVAHLG 832 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~ 832 (992)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.. +.+||+
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHRM------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEE
Confidence 799999999999999987543 489999999999999999999999 99999999999999764 569999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
|||+|+...... ......||+.|+|||++. +.++.++||||+||++|+|++|++||.+....
T Consensus 182 DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------- 243 (494)
T 3lij_A 182 DFGLSAVFENQK---------KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-------- 243 (494)
T ss_dssp CCTTCEECBTTB---------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------
T ss_pred ECCCCeECCCCc---------cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------
Confidence 999998765321 223356999999999876 56999999999999999999999999763221
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
++........+... ..........+.+++.+||+.||++|||+.|+++.
T Consensus 244 ---------~~~~~i~~~~~~~~--------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 244 ---------EILRKVEKGKYTFD--------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ---------HHHHHHHHTCCCCC--------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---------HHHHHHHhCCCCCC--------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11111111111000 00011123458899999999999999999999853
No 217
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.8e-38 Score=350.79 Aligned_cols=278 Identities=18% Similarity=0.198 Sum_probs=196.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeeccc-ccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSID-FKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 754 (992)
.++|++.+.||+|+||+||+|.+..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 3589999999999999999999998999999999974322 23456889999999999999999999976432 23345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++ +|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEEcCCC-CHHHHHhh--------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEe
Confidence 77999999964 78888752 378999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... .+......
T Consensus 172 g~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~ 241 (371)
T 2xrw_A 172 GLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQ 241 (371)
T ss_dssp CC-------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-
T ss_pred eccccccccc---------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 9998654321 1233568999999999999999999999999999999999999998643211 11111110
Q ss_pred hC--ChhHHHHHHhhHhHhhhccCC------------CCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 AL--PDKVMEIVDSVLLLEVQASNS------------RSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~~--~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.. .......+.+........... ...+...........++.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00 000000000000000000000 0000111112234567899999999999999999999986
No 218
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.1e-38 Score=344.24 Aligned_cols=259 Identities=23% Similarity=0.315 Sum_probs=203.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.. .....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCce
Confidence 4689999999999999999999998999999999975432 234668999999999999999999998643 23456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeccCCCCCeeeCCCCcEE
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPP-----VVHGDLKPSNVLLDQDLVAH 830 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~k 830 (992)
.++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKE--RQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred EEEEEeCCCCCCHHHHHHhhccc--CCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 79999999999999999865421 33589999999999999999999999 7 99999999999999999999
Q ss_pred EeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHH
Q 037275 831 LGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHE 910 (992)
Q Consensus 831 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~ 910 (992)
|+|||.++...... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 157 l~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------ 222 (279)
T 2w5a_A 157 LGDFGLARILNHDT--------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK------ 222 (279)
T ss_dssp ECCCCHHHHC---C--------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------
T ss_pred EecCchheeecccc--------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH------
Confidence 99999998654321 1112345899999999999989999999999999999999999999763211
Q ss_pred HHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 037275 911 FARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLC 980 (992)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 980 (992)
+........... ... .....++.+++.+||+.||++|||++||++.+.
T Consensus 223 -----------~~~~~i~~~~~~-----~~~------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 223 -----------ELAGKIREGKFR-----RIP------YRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----------HHHHHHHHTCCC-----CCC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----------HHHHHHhhcccc-----cCC------cccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 111111111000 000 112345889999999999999999999997653
No 219
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=348.22 Aligned_cols=264 Identities=22% Similarity=0.321 Sum_probs=200.9
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhc-cCCcceeEEEEeeccc
Q 037275 671 YAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNI-RHRNLIKIITICSSID 749 (992)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 749 (992)
+.++....++|++.+.||+|+||.||+|++..+++.||||++.... .....+.+|+.+++++ +||||+++++++....
T Consensus 16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 3344456778999999999999999999998899999999997443 3457789999999999 8999999999976532
Q ss_pred cc-CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc
Q 037275 750 FK-GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 750 ~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 828 (992)
.. .....++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence 21 14677999999999999999986542 3589999999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCCCCcccCCCCCccccccccccccccc-----CCCcCcccchhhHHHHHHHHHhCCCCCCCCcc
Q 037275 829 AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM-----GGEASMTGDVYSFGILLLEMFTRRRPTDGMFN 903 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 903 (992)
+||+|||++....... .......|++.|+|||++. +..++.++|||||||++|+|++|+.||.+...
T Consensus 168 ~kl~Dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 239 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 239 (326)
T ss_dssp EEECCCTTTC---------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred EEEeeCcCceecCcCc--------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH
Confidence 9999999998654321 1123346899999999986 56789999999999999999999999965321
Q ss_pred CCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 904 QGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
. . .......... .. . ........+.+++.+||+.||++|||++|+++
T Consensus 240 ~-----~------------~~~~~~~~~~----~~-~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 240 M-----R------------ALFLIPRNPA----PR-L-----KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp H-----H------------HHHHHHHSCC----CC-C-----SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred H-----H------------HHHHhhcCcc----cc-C-----CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1 0 0000000000 00 0 00111345889999999999999999999987
No 220
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.3e-38 Score=356.26 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=191.6
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhcc--CCcceeEEEEeecccccCcc
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIR--HRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~ 754 (992)
.+|++.+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|+.++++++ ||||+++++++.. ..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-----~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-----DQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----SS
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-----CC
Confidence 45999999999999999999987 489999999975432 23467899999999996 5999999998643 44
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||| +.+++|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++ ++.+||+||
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DF 198 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDF 198 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCC
T ss_pred EEEEEEe-cCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEec
Confidence 5799999 56889999998643 478899999999999999999999 999999999999995 589999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccC-----------CCcCcccchhhHHHHHHHHHhCCCCCCCCcc
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-----------GEASMTGDVYSFGILLLEMFTRRRPTDGMFN 903 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 903 (992)
|+++.+.... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+
T Consensus 199 G~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 272 (390)
T 2zmd_A 199 GIANQMQPDT------TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272 (390)
T ss_dssp SSSCCC---------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred CccccccCCC------ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH
Confidence 9998764321 1111234569999999999865 3688999999999999999999999975322
Q ss_pred CCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 904 QGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
.... +..+++. ..... .+. ....++.+++.+||+.||++|||+.|+++.
T Consensus 273 ~~~~------------~~~~~~~----~~~~~----~~~------~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 273 QISK------------LHAIIDP----NHEIE----FPD------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHH------------HHHHHCT----TSCCC----CCC------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHH------------HHHHhCc----cccCC----CCc------cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1000 1111111 00000 000 012458899999999999999999999853
No 221
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.4e-38 Score=355.02 Aligned_cols=200 Identities=29% Similarity=0.425 Sum_probs=173.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.+.||+|+||+||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.. ....
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-----TTEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-----CCEE
Confidence 3579999999999999999999998999999999975432 234678999999999999999999998643 4567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHH-HCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 177 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFG 177 (360)
T ss_dssp EEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCC
T ss_pred EEEEECCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEEEECC
Confidence 99999999999999997643 48999999999999999999998 5 79999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCC
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGM 901 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 901 (992)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 178 ~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 178 VSGQLIDS----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CCHHHHHH----------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCcccccc----------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 98754321 122346899999999999999999999999999999999999999763
No 222
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.1e-38 Score=348.57 Aligned_cols=265 Identities=18% Similarity=0.252 Sum_probs=205.0
Q ss_pred CcccHHHHHHHhcCCCCC-CccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhc-cCCcceeEE
Q 037275 667 PMISYAELSKATNDFSSS-NMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNI-RHRNLIKII 742 (992)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~ 742 (992)
+.+.+.......++|.+. +.||+|+||+||+|++..+++.||+|++.... ......+.+|+.+++.+ +||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 344445555666788887 89999999999999999899999999997443 23356789999999999 569999999
Q ss_pred EEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCee
Q 037275 743 TICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVL 822 (992)
Q Consensus 743 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIl 822 (992)
+++. .....++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 96 ~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl 163 (327)
T 3lm5_A 96 EVYE-----NTSEIILILEYAAGGEIFSLCLPELA----EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNIL 163 (327)
T ss_dssp EEEE-----CSSEEEEEEECCTTEEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred EEEE-----eCCeEEEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEE
Confidence 9964 45567999999999999999865432 3589999999999999999999999 9999999999999
Q ss_pred eCC---CCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCC
Q 037275 823 LDQ---DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTD 899 (992)
Q Consensus 823 l~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 899 (992)
++. ++.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.
T Consensus 164 ~~~~~~~~~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~ 234 (327)
T 3lm5_A 164 LSSIYPLGDIKIVDFGMSRKIGHAC---------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFV 234 (327)
T ss_dssp ESCBTTBCCEEECCGGGCEEC------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EecCCCCCcEEEeeCccccccCCcc---------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 988 7899999999998765321 1223468999999999999999999999999999999999999997
Q ss_pred CCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 900 GMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+..... ............ . ..........+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~-----------------~~~~i~~~~~~~--~------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 235 GEDNQE-----------------TYLNISQVNVDY--S------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp CSSHHH-----------------HHHHHHHTCCCC--C------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCchH-----------------HHHHHHhccccc--C------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 632210 000000000000 0 0000112345889999999999999999999975
No 223
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-37 Score=336.76 Aligned_cols=247 Identities=21% Similarity=0.348 Sum_probs=202.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|++++++++||||+++++++. ...
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH-----DRK 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE-----cCC
Confidence 45899999999999999999999989999999998643 2334567899999999999999999999964 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHG------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecc
Confidence 6799999999999999997643 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|.+...... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... +
T Consensus 159 g~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~---- 219 (284)
T 2vgo_A 159 GWSVHAPSL----------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----E---- 219 (284)
T ss_dssp TTCEECSSS----------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----H----
T ss_pred cccccCccc----------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----H----
Confidence 999765431 122346899999999999999999999999999999999999999753211 0
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.......... . .+ .....++.+++.+||+.||++|||++|+++
T Consensus 220 --------~~~~~~~~~~--~----~~------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 220 --------THRRIVNVDL--K----FP------PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp --------HHHHHHTTCC--C----CC------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --------HHHHHhcccc--C----CC------CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 0011100000 0 00 011345789999999999999999999986
No 224
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.3e-38 Score=356.15 Aligned_cols=277 Identities=21% Similarity=0.267 Sum_probs=186.4
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeeccc-ccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSID-FKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 754 (992)
.++|++.+.||+|+||.||+|.+..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++.... .....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 3589999999999999999999999999999999864322 23467889999999999999999999975431 22345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCEEEEECC-CEECC-----C-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-
T ss_pred eEEEEeccc-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeec
Confidence 679999999 78999998642 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ .+.....
T Consensus 177 G~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~ 244 (367)
T 2fst_X 177 GLARHTADE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILR 244 (367)
T ss_dssp -------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred ccccccccc-----------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 999864321 223468999999999877 678999999999999999999999998743211 1111111
Q ss_pred hh-CC-hhHHHHHHhhHhHhhhccCCCCCCcc-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TA-LP-DKVMEIVDSVLLLEVQASNSRSCGDE-RLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.. .+ ......+.......+........... ..........+.+++.+||+.||++|||++|+++
T Consensus 245 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 11 01 00000000000000000000000000 0000112356889999999999999999999985
No 225
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8.7e-38 Score=340.03 Aligned_cols=250 Identities=21% Similarity=0.299 Sum_probs=202.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++. ...
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----DND 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec-----cCC
Confidence 457999999999999999999999899999999986543 223466889999999999999999999964 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 159 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 159 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEec
Confidence 6799999999999999987543 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|.+....... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... +
T Consensus 160 g~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~---- 222 (294)
T 2rku_A 160 GLATKVEYDG--------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----E---- 222 (294)
T ss_dssp TTCEECCSTT--------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----H----
T ss_pred cCceecccCc--------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----H----
Confidence 9998764321 1122346899999999999989999999999999999999999999753211 0
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
.......... ..+ ......+.+++.+||+.||++|||++|+++.
T Consensus 223 --------~~~~~~~~~~------~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 223 --------TYLRIKKNEY------SIP------KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp --------HHHHHHTTCC------CCC------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --------HHHHHhhccC------CCc------cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000000 000 0112457899999999999999999999863
No 226
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=342.97 Aligned_cols=253 Identities=23% Similarity=0.336 Sum_probs=197.8
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
...++|++.+.||+|+||.||+|.+..+|+.||+|++... .....+.+|+.++++++||||+++++++.. ...
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 98 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFK-----NTD 98 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCE
Confidence 3456899999999999999999999988999999999643 345678999999999999999999998643 456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 170 (314)
T 3com_A 99 LWIVMEYCGAGSVSDIIRLRN-----KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFG 170 (314)
T ss_dssp EEEEEECCTTEEHHHHHHHHT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred EEEEeecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecc
Confidence 799999999999999997433 2589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
.+....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ..
T Consensus 171 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~----- 233 (314)
T 3com_A 171 VAGQLTDTM--------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM----RA----- 233 (314)
T ss_dssp TCEECBTTB--------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HH-----
T ss_pred cchhhhhhc--------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH----HH-----
Confidence 998765321 1223346899999999999999999999999999999999999999753211 00
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..... ... .... .........+.+++.+||+.||++|||+.|+++
T Consensus 234 --------~~~~~-~~~----~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 234 --------IFMIP-TNP----PPTF----RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --------HHHHH-HSC----CCCC----SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --------HHHHh-cCC----Cccc----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000 000 0000 000112345889999999999999999999986
No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.9e-38 Score=354.37 Aligned_cols=276 Identities=21% Similarity=0.270 Sum_probs=194.9
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccc-cCcceEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDF-KGVDFQA 757 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~ 757 (992)
.+|++.++||+|+||+||+|++..+++ ||+|.+..... ...+|+++++.++||||+++++++..... .+..+.+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 478999999999999999999975554 88887753322 12379999999999999999999865432 3445578
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC-CCCcEEEeeccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD-QDLVAHLGDFGL 836 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~ 836 (992)
+||||+++ ++...+..... ....+++..++.++.|+++||+|||++ +|+||||||+||+++ .++.+||+|||+
T Consensus 115 lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 115 LVLEYVPE-TVYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEECCSE-EHHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeeccCc-cHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 99999976 44444432211 123689999999999999999999999 999999999999998 799999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhh
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTA 915 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 915 (992)
|+...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+ .+.......
T Consensus 189 a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~ 258 (394)
T 4e7w_A 189 AKILIAGE---------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVL 258 (394)
T ss_dssp CEECCTTC---------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHH
T ss_pred cccccCCC---------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 98764322 12234689999999998765 58999999999999999999999998743221 122222211
Q ss_pred CChhHHHHHHhhHhHhhhccCCCCCCc---cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 916 LPDKVMEIVDSVLLLEVQASNSRSCGD---ERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.......+ ... ...+.......... ..........++.+++.+||+.||++|||+.|+++
T Consensus 259 g~p~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 259 GTPSREQI-KTM-NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CCCCHHHH-HHH-CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCHHHH-Hhh-ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 11111100 000 00110000000000 00000113456899999999999999999999986
No 228
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.6e-37 Score=351.54 Aligned_cols=360 Identities=19% Similarity=0.193 Sum_probs=243.6
Q ss_pred CCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCC
Q 037275 84 NNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHF 163 (992)
Q Consensus 84 n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~ 163 (992)
....+..+..++.+++|++|+|++|.+++ +| .++.+++|++|++++|++ ++ +
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l-------------------------~~-~ 79 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNI-------------------------TT-L 79 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCC-------------------------SC-C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcC-------------------------Ce-E
Confidence 33444455566777777777777777763 44 455555555555555554 43 2
Q ss_pred CCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccc
Q 037275 164 PASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSL 243 (992)
Q Consensus 164 p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 243 (992)
| ++.+++|++|++++|.+.+. + ++++++|++|++++|++++ +| +..+++|++|++++|++++
T Consensus 80 ~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~---------- 141 (457)
T 3bz5_A 80 D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE---------- 141 (457)
T ss_dssp C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC----------
T ss_pred c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce----------
Confidence 3 67788999999999999664 4 8999999999999999996 44 8999999999999998873
Q ss_pred cccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCc
Q 037275 244 PKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTE 323 (992)
Q Consensus 244 ~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~ 323 (992)
++ ++.+++|++|++++|+..+.. .+..+++|++|++++|+++.++ +..+++
T Consensus 142 ----------------l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~---------l~~l~~ 192 (457)
T 3bz5_A 142 ----------------ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD---------VSQNKL 192 (457)
T ss_dssp ----------------CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC---------CTTCTT
T ss_pred ----------------ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec---------cccCCC
Confidence 11 556789999999999654444 5888999999999999998754 455677
Q ss_pred ceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEecc
Q 037275 324 LTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLD 403 (992)
Q Consensus 324 L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 403 (992)
|+.|++++|++++. .++.+++|++|++++|++++ +| +..+++|+.|+++
T Consensus 193 L~~L~l~~N~l~~~----------------------------~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 193 LNRLNCDTNNITKL----------------------------DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCS 241 (457)
T ss_dssp CCEEECCSSCCSCC----------------------------CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECC
T ss_pred CCEEECcCCcCCee----------------------------ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEee
Confidence 77777777777643 13444555555555555554 23 4455555555555
Q ss_pred CccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCc
Q 037275 404 SNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGT 483 (992)
Q Consensus 404 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~ 483 (992)
+|++++.. +..+++|+.|++++|+ |+.|++++|.+.+.+|. .....++.|++++|.+.+.
T Consensus 242 ~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~~---~~l~~L~~L~Ls~n~~l~~ 301 (457)
T 3bz5_A 242 VNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQA---EGCRKIKELDVTHNTQLYL 301 (457)
T ss_dssp SSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEEC---TTCTTCCCCCCTTCTTCCE
T ss_pred CCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCcccc---cccccCCEEECCCCcccce
Confidence 55555432 2233444444444332 22333444443333331 1122333446666666656
Q ss_pred ccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcC
Q 037275 484 LPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENL 563 (992)
Q Consensus 484 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 563 (992)
+|. ...+|+.|++++| ++|++|++++|+|++. + ++++++|+.|++++|+|++ +
T Consensus 302 l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l 354 (457)
T 3bz5_A 302 LDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------F 354 (457)
T ss_dssp EEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------C
T ss_pred ecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------c
Confidence 653 3456666666655 6899999999999974 3 9999999999999999996 3
Q ss_pred CCcceEecCCCcCcccCCCCCccCCcccccccCCCCc
Q 037275 564 SFLEYLNLSYNHFEGEVPTKGVFSNKTGISLSGNGKV 600 (992)
Q Consensus 564 ~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N~~~ 600 (992)
+.|..|++++|.++|.. .+..+..+.+..|...
T Consensus 355 ~~L~~L~l~~n~l~g~~----~~~~l~~l~l~~N~l~ 387 (457)
T 3bz5_A 355 SSVGKIPALNNNFEAEG----QTITMPKETLTNNSLT 387 (457)
T ss_dssp TTGGGSSGGGTSEEEEE----EEEECCCBCCBTTBEE
T ss_pred cccccccccCCcEEecc----eeeecCccccccCcEE
Confidence 56788899999999872 3445666777777543
No 229
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2e-37 Score=362.97 Aligned_cols=252 Identities=23% Similarity=0.312 Sum_probs=199.0
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-------------CchhHHHHHHHHHHhccCCcceeEEE
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-------------GASNGFVAECQALRNIRHRNLIKIIT 743 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~ 743 (992)
..++|++.++||+|+||+||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35689999999999999999999998999999999964321 23467899999999999999999999
Q ss_pred EeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee
Q 037275 744 ICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL 823 (992)
Q Consensus 744 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll 823 (992)
++. +....++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 114 ~~~-----~~~~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~ 179 (504)
T 3q5i_A 114 VFE-----DKKYFYLVTEFYEGGELFEQIINRH------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILL 179 (504)
T ss_dssp EEE-----CSSEEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEE-----cCCEEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEE
Confidence 964 4566799999999999999997543 589999999999999999999999 99999999999999
Q ss_pred CCCC---cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCC
Q 037275 824 DQDL---VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDG 900 (992)
Q Consensus 824 ~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 900 (992)
+.++ .+||+|||+|....... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||.+
T Consensus 180 ~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~ 249 (504)
T 3q5i_A 180 ENKNSLLNIKIVDFGLSSFFSKDY---------KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG 249 (504)
T ss_dssp SSTTCCSSEEECCCTTCEECCTTS---------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCCCccEEEEECCCCEEcCCCC---------ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 8776 69999999998765321 223346999999999876 4699999999999999999999999986
Q ss_pred CccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 901 MFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.... +++.......+.. ..........++.+++.+||+.||.+|||++|+++
T Consensus 250 ~~~~-----------------~~~~~i~~~~~~~--------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 250 QNDQ-----------------DIIKKVEKGKYYF--------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp SSHH-----------------HHHHHHHHCCCCC--------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCHH-----------------HHHHHHHcCCCCC--------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3221 1111111110000 00000112345889999999999999999999985
No 230
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.4e-36 Score=352.76 Aligned_cols=191 Identities=25% Similarity=0.378 Sum_probs=105.8
Q ss_pred CCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccccccccc
Q 037275 72 NLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLEN 151 (992)
Q Consensus 72 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~ 151 (992)
.+++|+.|++++|.+. .+|. +..+++|++|+|++|.++ .+|. ++.+++|++|++++|++++ ++. +.++++|++
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~-~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLT-DITP-LKNLTKLVDILMNNNQIAD-ITP--LANLTNLTG 116 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-CGG--GTTCTTCCE
T ss_pred HhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccC-Cchh-hhccccCCEEECCCCcccc-Chh--hcCCCCCCE
Confidence 3566777777777776 4553 666777777777777776 3443 6666777777776666663 332 235556666
Q ss_pred ccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCcc
Q 037275 152 LTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRF 231 (992)
Q Consensus 152 L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l 231 (992)
|++++|.+++. |. +.++++|++|++++|.+.+ ++ .+..+++|++|+++ |.+.+. ..+.++++|++|++++|.+
T Consensus 117 L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~--~~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDL--KPLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCc--hhhccCCCCCEEECcCCcC
Confidence 66666665533 22 5556666666666665533 22 35555666666654 333322 1255555555555555554
Q ss_pred CCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCC
Q 037275 232 NGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLG 305 (992)
Q Consensus 232 ~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 305 (992)
.+ + ..+..+++|++|++++|++++..+ +..+++|++|++++|+++
T Consensus 190 ~~--------------------------~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 190 SD--------------------------I-SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp CC--------------------------C-GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred CC--------------------------C-hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 41 1 124445555555555555554433 444555555555555544
No 231
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.3e-38 Score=346.89 Aligned_cols=249 Identities=21% Similarity=0.297 Sum_probs=202.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. ...
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----DND 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----cCC
Confidence 457999999999999999999999899999999987442 223467889999999999999999999964 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecCCCCCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeec
Confidence 6799999999999999987543 589999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
|++....... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... +
T Consensus 186 g~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~---- 248 (335)
T 2owb_A 186 GLATKVEYDG--------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----E---- 248 (335)
T ss_dssp TTCEECCSTT--------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----H----
T ss_pred cCceecccCc--------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-----H----
Confidence 9998764321 1123346899999999999999999999999999999999999999753211 0
Q ss_pred hCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 ALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
........... .. ......+.+++.+||+.||++|||++|+++
T Consensus 249 --------~~~~~~~~~~~------~~------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 249 --------TYLRIKKNEYS------IP------KHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp --------HHHHHHHTCCC------CC------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --------HHHHHhcCCCC------CC------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01111100000 00 011245788999999999999999999986
No 232
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.4e-37 Score=338.17 Aligned_cols=250 Identities=24% Similarity=0.342 Sum_probs=203.4
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.+.|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DTKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CCeE
Confidence 356899999999999999999998899999999997543 3445788999999999999999999998643 4567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+++++|.+++... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 96 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp EEEEECCTTEEHHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccc
Confidence 9999999999999998642 489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhC
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
+....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .
T Consensus 166 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~------ 226 (303)
T 3a7i_A 166 AGQLTDTQ--------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----K------ 226 (303)
T ss_dssp CEECBTTB--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----H------
T ss_pred ceecCccc--------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----H------
Confidence 98765421 1123356899999999999999999999999999999999999998753211 0
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
....+. ... ..... ......+.+++.+||+.||++|||+.|+++.
T Consensus 227 ---~~~~~~---~~~-----~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 227 ---VLFLIP---KNN-----PPTLE------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ---HHHHHH---HSC-----CCCCC------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ---HHHHhh---cCC-----CCCCc------cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000 000 00000 0113458899999999999999999999874
No 233
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=353.08 Aligned_cols=259 Identities=16% Similarity=0.131 Sum_probs=201.8
Q ss_pred HhcCCCCCCccccccceEEEEeE-----ECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc---CCcceeEEEEeecc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGN-----LGENGMMVAVKVINLKQKGASNGFVAECQALRNIR---HRNLIKIITICSSI 748 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 748 (992)
..++|++.++||+|+||+||+|. ...+++.||||+++.. ...++.+|+++++.++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~- 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF- 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC-
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec-
Confidence 35679999999999999999994 5568899999998533 4566788888888886 9999999999643
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC---
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ--- 825 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--- 825 (992)
.+..++||||+++|+|.+++...... ....+++..++.++.|++.||+|||++ +|+||||||+|||++.
T Consensus 139 ----~~~~~lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~ 210 (365)
T 3e7e_A 139 ----QNGSVLVGELYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFL 210 (365)
T ss_dssp ----SSCEEEEECCCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGT
T ss_pred ----CCCcEEEEeccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEeccccc
Confidence 44569999999999999999864321 124599999999999999999999999 9999999999999998
Q ss_pred --------CCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCC
Q 037275 826 --------DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRP 897 (992)
Q Consensus 826 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p 897 (992)
++.+||+|||+|+.+.... .........||+.|+|||++.+..++.++|||||||++|||+||+.|
T Consensus 211 ~~~~~~~~~~~~kl~DFG~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p 284 (365)
T 3e7e_A 211 EQDDEDDLSAGLALIDLGQSIDMKLFP------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM 284 (365)
T ss_dssp CC------CTTEEECCCTTCEEGGGSC------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCC
T ss_pred CccccccccCCEEEeeCchhhhhhccC------CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCc
Confidence 8999999999998654221 11122345699999999999999999999999999999999999999
Q ss_pred CCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCC-CCHHHHH
Q 037275 898 TDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTER-MEMRDVV 976 (992)
Q Consensus 898 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl 976 (992)
|............ .. +.. . ....+.+++..|+..+|.+| |+++++.
T Consensus 285 f~~~~~~~~~~~~----~~---------------------~~~-----~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 285 KVKNEGGECKPEG----LF---------------------RRL-----P---HLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp CEEEETTEEEECS----CC---------------------TTC-----S---SHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred cccCCCCceeech----hc---------------------ccc-----C---cHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 8653221110000 00 000 0 12346678888999999998 6788888
Q ss_pred HHHHHHHHhh
Q 037275 977 AKLCRARDTF 986 (992)
Q Consensus 977 ~~L~~~~~~~ 986 (992)
+.|++.....
T Consensus 332 ~~l~~~l~~~ 341 (365)
T 3e7e_A 332 QKLKKVFQQH 341 (365)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888776553
No 234
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.1e-38 Score=346.68 Aligned_cols=266 Identities=23% Similarity=0.368 Sum_probs=201.8
Q ss_pred hcCCCCCCccccccceEEEEeE-----ECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGN-----LGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
.++|++.+.||+|+||.||+|+ ...+++.||||++.... ......+.+|+.++++++||||+++++++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 104 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ---- 104 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC----
Confidence 4589999999999999999999 44577899999996332 2344678899999999999999999999643
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccc-hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC---CC
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQ-QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ---DL 827 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~ 827 (992)
....++||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+||||||+||+++. +.
T Consensus 105 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 105 -SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred -CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 44559999999999999999876432 1123589999999999999999999999 9999999999999984 44
Q ss_pred cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCc
Q 037275 828 VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGL 906 (992)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~ 906 (992)
.+||+|||++........ ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||......
T Consensus 181 ~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 252 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASY------YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-- 252 (327)
T ss_dssp CEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred eEEECccccccccccccc------cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--
Confidence 699999999986543221 111233457899999999988899999999999999999998 99998753211
Q ss_pred cHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 907 TLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
+.......... .... ......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 253 ---------------~~~~~~~~~~~-~~~~----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 253 ---------------EVLEFVTSGGR-MDPP----------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp ---------------HHHHHHHTTCC-CCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------------HHHHHHhcCCC-CCCC----------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 11111110000 0000 11234588999999999999999999999999988654
No 235
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.2e-37 Score=343.63 Aligned_cols=253 Identities=22% Similarity=0.293 Sum_probs=196.6
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--------CCchhHHHHHHHHHHhccCCcceeEEEEeecc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--------KGASNGFVAECQALRNIRHRNLIKIITICSSI 748 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 748 (992)
..++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 86 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 86 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES-
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC-
Confidence 3467999999999999999999999899999999986432 1223458899999999999999999998643
Q ss_pred cccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc
Q 037275 749 DFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 828 (992)
. ..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 87 ----~-~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 152 (322)
T 2ycf_A 87 ----E-DYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 152 (322)
T ss_dssp ----S-SEEEEEECCTTEETHHHHSTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSS
T ss_pred ----C-ceEEEEecCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCC
Confidence 2 2699999999999999987543 589999999999999999999999 9999999999999987664
Q ss_pred ---EEEeecccceecCCCCCCCCcccCCCCCccccccccccccccc---CCCcCcccchhhHHHHHHHHHhCCCCCCCCc
Q 037275 829 ---AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM---GGEASMTGDVYSFGILLLEMFTRRRPTDGMF 902 (992)
Q Consensus 829 ---~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 902 (992)
+||+|||+++...... ......||+.|+|||++. ...++.++|||||||++|+|++|+.||....
T Consensus 153 ~~~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (322)
T 2ycf_A 153 DCLIKITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223 (322)
T ss_dssp SCCEEECCCTTCEECCCCH---------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT
T ss_pred CCeEEEccCccceeccccc---------ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 9999999998764321 112345899999999863 5678999999999999999999999998643
Q ss_pred cCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 903 NQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
................ .... ......++.+++.+||+.||++|||++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~-~~~~-----------------------~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 224 TQVSLKDQITSGKYNF-IPEV-----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CSSCHHHHHHHTCCCC-CHHH-----------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hHHHHHHHHHhCcccc-Cchh-----------------------hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 3322111111111100 0000 0012345889999999999999999999985
No 236
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=370.64 Aligned_cols=262 Identities=29% Similarity=0.470 Sum_probs=208.4
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.++||+|+||.||+|++. .+..||||+++... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~~ 337 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 337 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccce
Confidence 457888999999999999999997 46789999997443 345789999999999999999999998643 3468
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 338 lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 410 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGET----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 410 (535)
T ss_dssp EEECCCTTEEHHHHHSHHH----HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred EeeehhcCCcHHHHHhhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence 9999999999999997543 23589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhC
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
+...... ........++..|+|||++.+..++.++|||||||++|||++ |+.||.+....
T Consensus 411 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~------------ 471 (535)
T 2h8h_A 411 RLIEDNE-------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------------ 471 (535)
T ss_dssp TTCCCHH-------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH------------
T ss_pred eecCCCc-------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------------
Confidence 8654321 111223346889999999998899999999999999999999 99999764221
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhhc
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLGR 989 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 989 (992)
++.+... ..+..... ......+.+++.+||+.||++|||+++|++.|+++......+
T Consensus 472 -----~~~~~i~-~~~~~~~~----------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~ 528 (535)
T 2h8h_A 472 -----EVLDQVE-RGYRMPCP----------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 528 (535)
T ss_dssp -----HHHHHHH-TTCCCCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCS
T ss_pred -----HHHHHHH-cCCCCCCC----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCcc
Confidence 1111111 00000000 112345889999999999999999999999999876654443
No 237
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.5e-38 Score=345.81 Aligned_cols=253 Identities=22% Similarity=0.318 Sum_probs=197.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|+.++++++||||+++++++.. ....+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 92 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-----DGKLW 92 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----C-CEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-----CCeEE
Confidence 4589999999999999999999998999999999976666677889999999999999999999999643 45679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccc
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLA 837 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 837 (992)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELDR-----GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp EEEECCTTEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred EEEEeCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 99999999999999876432 489999999999999999999999 9999999999999999999999999987
Q ss_pred eecCCCCCCCCcccCCCCCcccccccccccccc-----cCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 838 KFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYG-----MGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
..... .........||+.|+|||++ .+..++.++|||||||++|+|++|+.||......
T Consensus 165 ~~~~~--------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------- 228 (302)
T 2j7t_A 165 AKNLK--------TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------- 228 (302)
T ss_dssp HHHHH--------HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------
T ss_pred ccccc--------cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--------
Confidence 54321 11112234689999999987 4667899999999999999999999999753211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
............ . .........++.+++.+||+.||++|||+.|+++
T Consensus 229 ---------~~~~~~~~~~~~-----~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 229 ---------RVLLKIAKSDPP-----T----LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ---------HHHHHHHHSCCC-----C----CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ---------HHHHHHhccCCc-----c----cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000000000 0 0001112345889999999999999999999975
No 238
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.9e-38 Score=366.13 Aligned_cols=251 Identities=28% Similarity=0.382 Sum_probs=202.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.++||+|+||+||+|++..+++.||||++.... ......+.+|+.++++++||||+++++++. ...
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-----DKG 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eCC
Confidence 357999999999999999999999999999999996442 345677899999999999999999999964 456
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee---CCCCcEEE
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL---DQDLVAHL 831 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl 831 (992)
..++||||+.+|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRK------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEE
Confidence 6799999999999999997643 489999999999999999999999 99999999999999 56789999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+|||+|+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||.+....
T Consensus 171 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------- 233 (484)
T 3nyv_A 171 IDFGLSTHFEASK---------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY------- 233 (484)
T ss_dssp CCTTHHHHBCCCC---------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------
T ss_pred EeeeeeEEccccc---------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-------
Confidence 9999998765321 1233468999999999876 6899999999999999999999999763211
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.+.......+.. ...........+.+++.+||+.||++|||+.|+++
T Consensus 234 ----------~~~~~i~~~~~~~--------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 234 ----------DILKKVEKGKYTF--------ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ----------HHHHHHHHCCCCC--------CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----------HHHHHHHcCCCCC--------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 1111111111100 00011122345889999999999999999999986
No 239
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=345.04 Aligned_cols=279 Identities=20% Similarity=0.292 Sum_probs=198.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeeccc--------
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSID-------- 749 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 749 (992)
.++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|+.++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 358999999999999999999999889999999997665555678899999999999999999999875321
Q ss_pred -ccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC-CCC
Q 037275 750 -FKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD-QDL 827 (992)
Q Consensus 750 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 827 (992)
.......++||||++ |+|.+++... .+++..++.++.|++.||+|||++ +|+||||||+||+++ +++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 234567899999997 6999998642 488999999999999999999999 999999999999997 567
Q ss_pred cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCc
Q 037275 828 VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGL 906 (992)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~ 906 (992)
.+||+|||.++....... .........++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.....
T Consensus 159 ~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 232 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYS-----HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE- 232 (320)
T ss_dssp EEEECCCTTCBCC-------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred eEEEccCccccccCCCcc-----cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-
Confidence 999999999987643211 1112233457899999998765 678999999999999999999999998643211
Q ss_pred cHHHHHhhhC--Chh-HHHHHHh---hHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 907 TLHEFARTAL--PDK-VMEIVDS---VLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 907 ~~~~~~~~~~--~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.......... ... ..+.... ........ .. ............++.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 233 QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTE--PH--KPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTS--CC--CCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhcCCCchhhhhhhhhcCcccccccccC--CC--CChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1111111110 000 1111100 00000000 00 0000000112456899999999999999999999986
No 240
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.3e-37 Score=347.41 Aligned_cols=289 Identities=24% Similarity=0.270 Sum_probs=196.8
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccc
Q 037275 671 YAELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDF 750 (992)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 750 (992)
..+.....++|++.+.||+|+||+||+|++..+++.||||++... ........+|+..++.++||||+++++++.....
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 345667788999999999999999999999989999999998643 3344567788888999999999999999865332
Q ss_pred --cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHH--hcCCCCeEeccCCCCCeeeCC-
Q 037275 751 --KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIH--HHCQPPVVHGDLKPSNVLLDQ- 825 (992)
Q Consensus 751 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~~~~ivH~Dlkp~NIll~~- 825 (992)
....+.++||||+++ ++.+.+..... ....+++..+..++.|++.||+||| ++ +|+||||||+||+++.
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 233457899999975 66655543221 1335889999999999999999999 88 9999999999999996
Q ss_pred CCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCccC
Q 037275 826 DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMFNQ 904 (992)
Q Consensus 826 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 904 (992)
++.+||+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+....
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 238 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSE---------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA 238 (360)
T ss_dssp TTEEEECCCTTCBCCCTTS---------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred CCcEEEeeCCCceecCCCC---------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH
Confidence 8999999999998765322 12234689999999998665 4899999999999999999999999874322
Q ss_pred CccHHHHHhhhC--ChhHHHHHHhhHhHhhhccCCCCCCcc---ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 905 GLTLHEFARTAL--PDKVMEIVDSVLLLEVQASNSRSCGDE---RLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 905 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..+....+... +.......++... ............. .........++.+++.+||+.||++|||+.|+++
T Consensus 239 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 239 -GQLHEIVRVLGCPSREVLRKLNPSHT-DVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp -HHHHHHHHHHCCCCHHHHHHHCTTCC-CGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -HHHHHHHHHcCCCCHHHHHhcccchh-hccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11222222111 1111111111000 0000000000000 0000113467899999999999999999999985
No 241
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.7e-37 Score=334.45 Aligned_cols=249 Identities=27% Similarity=0.375 Sum_probs=194.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+.+++.++||||+++++++. ...
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-----TPT 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----cCC
Confidence 35899999999999999999999889999999999643 2344567899999999999999999999864 345
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeec
Confidence 6799999999999999997643 489999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
|.+....... ......|++.|+|||++.+..+ +.++||||+|+++|+|++|+.||......
T Consensus 156 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------- 217 (276)
T 2h6d_A 156 GLSNMMSDGE---------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--------- 217 (276)
T ss_dssp CGGGCCCC----------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH---------
T ss_pred ccccccCCCc---------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH---------
Confidence 9998654321 1123458999999999888765 68999999999999999999999753111
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
........... ..+ ......+.+++.+||+.||++|||++|+++.
T Consensus 218 --------~~~~~~~~~~~------~~~------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 218 --------TLFKKIRGGVF------YIP------EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp --------HHHHHHHHCCC------CCC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --------HHHHHhhcCcc------cCc------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11111110000 000 0113458899999999999999999999873
No 242
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.6e-38 Score=342.58 Aligned_cols=276 Identities=25% Similarity=0.380 Sum_probs=199.9
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|+.++++++||||+++++++.. .+.
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENK 76 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-----CCc
Confidence 357899999999999999999999899999999986443 2334678899999999999999999999643 456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||++ |+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 77 ~~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 148 (299)
T 2r3i_A 77 LYLVFEFLH-QDLKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFG 148 (299)
T ss_dssp EEEEEECCS-EEHHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTT
T ss_pred eEEEEEccc-CCHHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcch
Confidence 799999997 699999986542 2588999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCC-cCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGE-ASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
.+....... .......+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+....+. .......
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~ 219 (299)
T 2r3i_A 149 LARAFGVPV--------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRT 219 (299)
T ss_dssp HHHHHCCCS--------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH
T ss_pred hhhhccCCc--------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHH
Confidence 998764321 1122345899999999987765 78999999999999999999999986432211 1111110
Q ss_pred -hCChh-HHHHHHhhHhHhhhccCCCCCCcc-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 -ALPDK-VMEIVDSVLLLEVQASNSRSCGDE-RLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..+.. ....... ...+........... .........++.+++.+||+.||++|||+.|+++
T Consensus 220 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 220 LGTPDEVVWPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp HCCCCTTTSTTGGG--STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hCCCchhhhhHhhc--CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000 0000000 000000000000000 0000112356889999999999999999999986
No 243
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.6e-36 Score=350.39 Aligned_cols=347 Identities=29% Similarity=0.409 Sum_probs=208.7
Q ss_pred cccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEec
Q 037275 147 LKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFL 226 (992)
Q Consensus 147 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l 226 (992)
++|+.|++++|.++ .+| .+..+++|++|++++|.+.+..+ +.++++|++|++++|++++..+ +.++++|++|++
T Consensus 46 ~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 34444444444444 233 24445555555555555533222 5555555555555555553222 555555555555
Q ss_pred cCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCC
Q 037275 227 PTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGT 306 (992)
Q Consensus 227 ~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 306 (992)
++|++++. +. +..+++|++|++++|.+.+ ++ .++.+++|++|+++ |.+.+..+ +..+++|++|++++|.++.
T Consensus 120 ~~n~l~~~-~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 120 FNNQITDI-DP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CSSCCCCC-GG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-hH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCC
Confidence 55544421 10 1112222222222222221 11 24445555555553 33332221 4555555555555555443
Q ss_pred CCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCC
Q 037275 307 GEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGT 386 (992)
Q Consensus 307 ~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (992)
++ .+..+++ |++|++++|++++..| ++.+++|++|++++|++++.
T Consensus 192 ~~--------~l~~l~~-------------------------L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 236 (466)
T 1o6v_A 192 IS--------VLAKLTN-------------------------LESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI 236 (466)
T ss_dssp CG--------GGGGCTT-------------------------CSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred Ch--------hhccCCC-------------------------CCEEEecCCccccccc--ccccCCCCEEECCCCCcccc
Confidence 21 1333333 4555555555554443 55667777888888777643
Q ss_pred CCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhh
Q 037275 387 IPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSI 466 (992)
Q Consensus 387 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~ 466 (992)
..+..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|+++
T Consensus 237 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~---------- 300 (466)
T 1o6v_A 237 --GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLE---------- 300 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCS----------
T ss_pred --hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCccc----------
Confidence 356777788888888888775544 6777788888888888875433 667777777755555443
Q ss_pred cccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEE
Q 037275 467 STLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELD 546 (992)
Q Consensus 467 ~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 546 (992)
+..+ +..+++|++|+|++|++++..| +..+++|++|++++|++++. ..+..+++|+.|+
T Consensus 301 ---------------~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 359 (466)
T 1o6v_A 301 ---------------DISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLS 359 (466)
T ss_dssp ---------------CCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEE
T ss_pred ---------------Cchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEe
Confidence 3322 6788899999999999987665 78889999999999999865 4788999999999
Q ss_pred CCCcccCCCChhhhhcCCCcceEecCCCcCcccCC
Q 037275 547 MSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVP 581 (992)
Q Consensus 547 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 581 (992)
+++|++++..| +..+++|+.|++++|++++.+.
T Consensus 360 l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~p~ 392 (466)
T 1o6v_A 360 AGHNQISDLTP--LANLTRITQLGLNDQAWTNAPV 392 (466)
T ss_dssp CCSSCCCBCGG--GTTCTTCCEEECCCEEEECCCB
T ss_pred CCCCccCccch--hhcCCCCCEEeccCCcccCCch
Confidence 99999998776 8889999999999999988543
No 244
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=372.33 Aligned_cols=256 Identities=21% Similarity=0.341 Sum_probs=200.1
Q ss_pred ccccccceEEEEeEEC--CCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEEEEEEe
Q 037275 686 MIGQGSFGFVYKGNLG--ENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQAIVYEY 762 (992)
Q Consensus 686 ~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 762 (992)
.||+|+||+||+|.+. .++..||||+++... ....+.+.+|++++++++||||+++++++.. ...++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCeEEEEEe
Confidence 7999999999999874 356789999997543 3356789999999999999999999999743 246999999
Q ss_pred ccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccceecCC
Q 037275 763 MQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFLSS 842 (992)
Q Consensus 763 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 842 (992)
+++|+|.+++..... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+....
T Consensus 417 ~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 417 AGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp CTTCBHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred CCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999975432 489999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhCChhHH
Q 037275 843 SPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTALPDKVM 921 (992)
Q Consensus 843 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 921 (992)
.... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||.+.... ...
T Consensus 489 ~~~~-----~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------------~~~ 549 (613)
T 2ozo_A 489 DDSY-----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------------EVM 549 (613)
T ss_dssp ------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--------------HHH
T ss_pred CCce-----eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------------HHH
Confidence 2110 111122345789999999998999999999999999999998 99999864321 011
Q ss_pred HHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhh
Q 037275 922 EIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFLG 988 (992)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 988 (992)
..+.. ....... .....++.+++.+||+.||++|||+.+|++.|+.+..+...
T Consensus 550 ~~i~~----~~~~~~p----------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 550 AFIEQ----GKRMECP----------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp HHHHT----TCCCCCC----------TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHc----CCCCCCC----------CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 11110 0000000 11235689999999999999999999999999998776544
No 245
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=9.4e-38 Score=349.47 Aligned_cols=280 Identities=24% Similarity=0.308 Sum_probs=204.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.+.||+|+||+||+|++..+|+.||||++..... .....+.+|+.++++++||||+++++++....+......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 4589999999999999999999998999999999964332 234567899999999999999999999876555666788
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+. |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEeccC-ccHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 99999996 5999998752 489999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCCCCc--ccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 837 AKFLSSSPLDTAV--ETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 837 a~~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
++........... ..........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+...... ......
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~ 237 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFG 237 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHH
Confidence 9877543211110 01112234578999999998764 6789999999999999999999999986432111 111000
Q ss_pred h-hCC-----------hhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 T-ALP-----------DKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
. ..+ ....+..... . ..... ...........++.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSL-----P--MYPAA-PLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTS-----C--CCCCC-CHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCchhccccccccchhhHHhhcc-----c--CCCCc-chhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 000 0000110000 0 00000 000000122456889999999999999999999986
No 246
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.7e-37 Score=370.64 Aligned_cols=255 Identities=25% Similarity=0.370 Sum_probs=199.4
Q ss_pred CccccccceEEEEeEE--CCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceEEEEE
Q 037275 685 NMIGQGSFGFVYKGNL--GENGMMVAVKVINLKQK--GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQAIVY 760 (992)
Q Consensus 685 ~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 760 (992)
++||+|+||+||+|.+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++.. ...++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence 4799999999999955 45678999999975432 335789999999999999999999998742 2368999
Q ss_pred EeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccceec
Q 037275 761 EYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFL 840 (992)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 840 (992)
||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+.+
T Consensus 449 E~~~~g~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp ECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EccCCCCHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 9999999999997543 589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHHhhhCChh
Q 037275 841 SSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFARTALPDK 919 (992)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 919 (992)
...... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.... .
T Consensus 520 ~~~~~~-----~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------------~ 580 (635)
T 4fl3_A 520 RADENY-----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------------E 580 (635)
T ss_dssp TC------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------------H
T ss_pred ccCccc-----cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------------H
Confidence 543211 111222346789999999999999999999999999999998 99999764221 0
Q ss_pred HHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 037275 920 VMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTFL 987 (992)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 987 (992)
....+.. .... ..+ .....++.+++.+||+.||++|||+++|++.|+++..++.
T Consensus 581 ~~~~i~~----~~~~----~~p------~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~ 634 (635)
T 4fl3_A 581 VTAMLEK----GERM----GCP------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 634 (635)
T ss_dssp HHHHHHT----TCCC----CCC------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHc----CCCC----CCC------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence 1111111 0000 000 1123568999999999999999999999999999877653
No 247
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.3e-37 Score=337.80 Aligned_cols=248 Identities=21% Similarity=0.280 Sum_probs=196.7
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 753 (992)
..++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|+..+..+ +||||+++++++.+ .
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-----~ 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-----D 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-----T
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-----C
Confidence 3568999999999999999999999899999999997542 23456788999999999 99999999999643 4
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC-------
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD------- 826 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------- 826 (992)
...++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 84 DHMLIQNEYCNGGSLADAISENYRI--MSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred CeEEEEEEecCCCcHHHHHHhhccc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 5679999999999999999865421 23589999999999999999999999 99999999999999844
Q ss_pred ------------CcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHh
Q 037275 827 ------------LVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFT 893 (992)
Q Consensus 827 ------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ellt 893 (992)
..+||+|||.+...... ....||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSP------------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAG 226 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCS------------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCCceEEEEcccccccccCCc------------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhc
Confidence 48999999999876432 122489999999998776 56789999999999999999
Q ss_pred CCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 037275 894 RRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMR 973 (992)
Q Consensus 894 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 973 (992)
|.+|+... ........... ...+ .....++.+++.+||+.||++|||+.
T Consensus 227 ~~~~~~~~----~~~~~~~~~~~---------------------~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~ 275 (289)
T 1x8b_A 227 AEPLPRNG----DQWHEIRQGRL---------------------PRIP------QVLSQEFTELLKVMIHPDPERRPSAM 275 (289)
T ss_dssp CCCCCSSS----HHHHHHHTTCC---------------------CCCS------SCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCcch----hHHHHHHcCCC---------------------CCCC------cccCHHHHHHHHHHhCCCcccCCCHH
Confidence 99876431 01111100000 0000 01134588999999999999999999
Q ss_pred HHHH
Q 037275 974 DVVA 977 (992)
Q Consensus 974 evl~ 977 (992)
|+++
T Consensus 276 ~ll~ 279 (289)
T 1x8b_A 276 ALVK 279 (289)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9975
No 248
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=336.13 Aligned_cols=256 Identities=20% Similarity=0.325 Sum_probs=199.5
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC----CCchhHHHHHHHHHHhccCCcceeEEEEeecccccC
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ----KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKG 752 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 752 (992)
..++|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.++++++||||+++++++.. .+
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 79 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EE 79 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C-
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CC
Confidence 3578999999999999999999999899999999996432 3445778999999999999999999998643 33
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEe
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLG 832 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 832 (992)
....++||||++++ +.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 80 ~~~~~lv~e~~~~~-l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~ 151 (305)
T 2wtk_C 80 KQKMYMVMEYCVCG-MQEMLDSVPE----KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKIS 151 (305)
T ss_dssp --CEEEEEECCSEE-HHHHHHHSTT----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEEC
T ss_pred CCeEEEEehhccCC-HHHHHHhCcc----cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEee
Confidence 45679999999876 8787765432 3589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCC--cCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGE--ASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHE 910 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~ 910 (992)
|||.+........ ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||.+... .
T Consensus 152 dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~- 219 (305)
T 2wtk_C 152 ALGVAEALHPFAA------DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-----Y- 219 (305)
T ss_dssp CCTTCEECCTTCS------SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-----H-
T ss_pred ccccccccCcccc------ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-----H-
Confidence 9999987653221 11122345899999999987643 47899999999999999999999975311 1
Q ss_pred HHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 911 FARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
+........... .. ......+.+++.+||+.||++|||++|+++.
T Consensus 220 -----------~~~~~i~~~~~~------~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 220 -----------KLFENIGKGSYA------IP------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----------HHHHHHHHCCCC------CC------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----------HHHHHHhcCCCC------CC------CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111111000 00 0123458899999999999999999999863
No 249
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.6e-38 Score=353.14 Aligned_cols=260 Identities=11% Similarity=0.016 Sum_probs=182.3
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC---CchhHHHHHHHHHHhc--cCCcceeEEE-------Ee
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK---GASNGFVAECQALRNI--RHRNLIKIIT-------IC 745 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~~-------~~ 745 (992)
..+|++.+.||+|+||+||+|++..+++.||||++..... ...+.+.+|+.+++.+ +||||++++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 3458899999999999999999998999999999976543 2345677886555555 5999888653 32
Q ss_pred ecccc------------cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHH------HHHHHHHHHHHHHHHhcC
Q 037275 746 SSIDF------------KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQR------INIIIDVASAIEYIHHHC 807 (992)
Q Consensus 746 ~~~~~------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~------~~i~~qi~~~L~~LH~~~ 807 (992)
..... ......++||||++ |+|.+++..... .+++..+ +.++.|++.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-----VYVFRGDEGILALHILTAQLIRLAANLQSK- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC-
Confidence 21110 01145799999998 899999987532 2455555 77889999999999999
Q ss_pred CCCeEeccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC--CCcCcccchhhHH
Q 037275 808 QPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG--GEASMTGDVYSFG 885 (992)
Q Consensus 808 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG 885 (992)
+|+||||||+||+++.++.+||+|||+|+..... .....+|+.|+|||++.+ ..++.++||||||
T Consensus 214 --~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG 280 (371)
T 3q60_A 214 --GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----------GPASSVPVTYAPREFLNASTATFTHALNAWQLG 280 (371)
T ss_dssp --TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHH
T ss_pred --CCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----------ccCccCCcCCcChhhccCCCCCcCccccHHHHH
Confidence 9999999999999999999999999999865421 112346799999999987 6799999999999
Q ss_pred HHHHHHHhCCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCC
Q 037275 886 ILLLEMFTRRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMES 965 (992)
Q Consensus 886 ~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 965 (992)
|++|||++|+.||.+........ +...... .. ..... ...........+.+++.+||+.|
T Consensus 281 ~il~elltg~~Pf~~~~~~~~~~--~~~~~~~-------------~~---~~~~~--~~~~~~~~~~~~~~li~~~L~~d 340 (371)
T 3q60_A 281 LSIYRVWCLFLPFGLVTPGIKGS--WKRPSLR-------------VP---GTDSL--AFGSCTPLPDFVKTLIGRFLNFD 340 (371)
T ss_dssp HHHHHHHHSSCSTTBCCTTCTTC--CCBCCTT-------------SC---CCCSC--CCTTSSCCCHHHHHHHHHHTCSS
T ss_pred HHHHHHHhCCCCCCCcCcccccc--hhhhhhh-------------hc---ccccc--chhhccCCCHHHHHHHHHHcCCC
Confidence 99999999999998753221100 0000000 00 00000 00000112346889999999999
Q ss_pred CCCCCCHHHHHH
Q 037275 966 PTERMEMRDVVA 977 (992)
Q Consensus 966 P~~RPs~~evl~ 977 (992)
|++|||+.|+++
T Consensus 341 P~~Rpt~~e~l~ 352 (371)
T 3q60_A 341 RRRRLLPLEAME 352 (371)
T ss_dssp TTTCCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999974
No 250
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.5e-37 Score=371.73 Aligned_cols=250 Identities=24% Similarity=0.307 Sum_probs=203.1
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeecc---CCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccC
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLK---QKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKG 752 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 752 (992)
..++|++.++||+|+||+||+|++..+++.||||+++.. .....+.+..|..++..+ +||+|+++++++ .+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~-----~~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC-----BC
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE-----Ee
Confidence 456899999999999999999999999999999999743 344556788999999988 799999999984 45
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEe
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLG 832 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 832 (992)
....++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEEC
T ss_pred CCEEEEEEeCcCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEe
Confidence 667899999999999999998643 489999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
|||+|+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+....
T Consensus 485 DFGla~~~~~~--------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-------- 548 (674)
T 3pfq_A 485 DFGMCKENIWD--------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-------- 548 (674)
T ss_dssp CCTTCEECCCT--------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------
T ss_pred ecceeeccccC--------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--------
Confidence 99999864322 12234467999999999999999999999999999999999999999763211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEM-----RDVVA 977 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 977 (992)
++...+...... .+ .....++.+++.+||+.||++||++ +||++
T Consensus 549 ---------~~~~~i~~~~~~------~p------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 549 ---------ELFQSIMEHNVA------YP------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ---------HHHHHHHSSCCC------CC------TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ---------HHHHHHHhCCCC------CC------ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 111111111110 00 0123458899999999999999998 56553
No 251
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.8e-37 Score=350.78 Aligned_cols=278 Identities=18% Similarity=0.253 Sum_probs=204.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc--------CCcceeEEEEeeccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR--------HRNLIKIITICSSID 749 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~ 749 (992)
.++|++.++||+|+||+||+|++..+++.||||+++.. ....+.+.+|+.+++.++ ||||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36899999999999999999999989999999999632 234567889999999995 788999999875321
Q ss_pred ccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCC--
Q 037275 750 FKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDL-- 827 (992)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 827 (992)
......++||||+ ++++.+++..... ..+++..++.++.||+.||+|||++. +|+||||||+|||++.++
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred -CCCceEEEEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 2456789999999 6677777665432 25899999999999999999999853 799999999999999775
Q ss_pred -----------------------------------------------cEEEeecccceecCCCCCCCCcccCCCCCcccc
Q 037275 828 -----------------------------------------------VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKG 860 (992)
Q Consensus 828 -----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~g 860 (992)
.+||+|||.|+..... .....|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----------~~~~~g 255 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----------FTEDIQ 255 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----------SCSCCS
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----------CccCCC
Confidence 7999999999876432 123468
Q ss_pred cccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHH-----HHHhh--hCChhHHHHHHhhHhHhhh
Q 037275 861 TVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLH-----EFART--ALPDKVMEIVDSVLLLEVQ 933 (992)
Q Consensus 861 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~ 933 (992)
|+.|+|||++.+..++.++|||||||++|||++|+.||.+......... ..... ..+.... ........+-
T Consensus 256 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~ 333 (397)
T 1wak_A 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI--VAGKYSKEFF 333 (397)
T ss_dssp CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHH--HHCTTGGGTB
T ss_pred CCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHh--hccccccccc
Confidence 9999999999999999999999999999999999999987543322111 11110 0111110 0000000000
Q ss_pred cc--CCCCCCc------------cccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 934 AS--NSRSCGD------------ERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 934 ~~--~~~~~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.. ....... ......+....+.+++.+||+.||++|||++|+++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 334 TKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 0000000 00112455678999999999999999999999985
No 252
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.5e-38 Score=339.72 Aligned_cols=262 Identities=27% Similarity=0.375 Sum_probs=195.8
Q ss_pred hcCCCCCCccccccceEEEEeEECC-CC--eEEEEEEeeccC---CCchhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGE-NG--MMVAVKVINLKQ---KGASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~--~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
.++|++.+.||+|+||+||+|++.. ++ ..||||+++... ....+.+.+|+.++++++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--- 93 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence 3579999999999999999998632 33 369999986432 33456789999999999999999999996532
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEE
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHL 831 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 831 (992)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 94 ---~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl 162 (291)
T 1u46_A 94 ---PMKMVTELAPLGSLLDRLRKHQG-----HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKI 162 (291)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHHGG-----GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEE
T ss_pred ---CceeeEecccCCCHHHHHHhccC-----CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEE
Confidence 25899999999999999986532 489999999999999999999999 9999999999999999999999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHE 910 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~ 910 (992)
+|||++........ .........+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.+....
T Consensus 163 ~Dfg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------ 231 (291)
T 1u46_A 163 GDFGLMRALPQNDD-----HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------ 231 (291)
T ss_dssp CCCTTCEECCC-CC-----EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------
T ss_pred cccccccccccccc-----chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------
Confidence 99999987654321 1111223457889999999988889999999999999999999 99999753211
Q ss_pred HHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 911 FARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
+............ . .......++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 232 -----------~~~~~~~~~~~~~------~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 232 -----------QILHKIDKEGERL------P----RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -----------HHHHHHHTSCCCC------C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -----------HHHHHHHccCCCC------C----CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 1111111000000 0 0011235689999999999999999999999999887543
No 253
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.2e-37 Score=335.44 Aligned_cols=254 Identities=22% Similarity=0.308 Sum_probs=201.4
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC---------CchhHHHHHHHHHHhcc-CCcceeEEEEe
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK---------GASNGFVAECQALRNIR-HRNLIKIITIC 745 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 745 (992)
...++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 446789999999999999999999998999999999975431 12356789999999995 99999999996
Q ss_pred ecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC
Q 037275 746 SSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ 825 (992)
Q Consensus 746 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 825 (992)
. .....++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 94 ~-----~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~ 159 (298)
T 1phk_A 94 E-----TNTFFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDD 159 (298)
T ss_dssp E-----CSSEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECT
T ss_pred c-----cCCeEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcC
Confidence 3 4566799999999999999997543 589999999999999999999999 9999999999999999
Q ss_pred CCcEEEeecccceecCCCCCCCCcccCCCCCccccccccccccccc------CCCcCcccchhhHHHHHHHHHhCCCCCC
Q 037275 826 DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM------GGEASMTGDVYSFGILLLEMFTRRRPTD 899 (992)
Q Consensus 826 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlG~il~elltg~~pf~ 899 (992)
++.+||+|||.+....... ......|++.|+|||++. ...++.++||||||+++|+|++|+.||.
T Consensus 160 ~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 230 (298)
T 1phk_A 160 DMNIKLTDFGFSCQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230 (298)
T ss_dssp TCCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCcEEEecccchhhcCCCc---------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCc
Confidence 9999999999998765321 122346899999999875 4568899999999999999999999997
Q ss_pred CCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 900 GMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..... ............. . ..........+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~-----------------~~~~~~~~~~~~~-----~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 231 HRKQM-----------------LMLRMIMSGNYQF-----G---SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CSSHH-----------------HHHHHHHHTCCCC-----C---TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CccHH-----------------HHHHHHhcCCccc-----C---cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 53211 0111111110000 0 0001122456889999999999999999999975
No 254
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.5e-37 Score=349.09 Aligned_cols=203 Identities=25% Similarity=0.330 Sum_probs=170.1
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-CC-----cceeEEEEeeccc
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR-HR-----NLIKIITICSSID 749 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~ 749 (992)
...++|++.++||+|+||+||+|++..+++.||||+++.. ......+.+|+.+++.++ |+ +|+++.+++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-- 127 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-- 127 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE--
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc--
Confidence 3467899999999999999999999989999999999632 223456778999988885 44 49999998643
Q ss_pred ccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC--CCC
Q 037275 750 FKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD--QDL 827 (992)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~ 827 (992)
....++||||++ |+|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .++
T Consensus 128 ---~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 128 ---RNHLCLVFEMLS-YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp ---TTEEEEEEECCC-CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSC
T ss_pred ---CCceEEEEecCC-CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCC
Confidence 456799999995 599999986542 2589999999999999999999953 12899999999999994 477
Q ss_pred cEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCC
Q 037275 828 VAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGM 901 (992)
Q Consensus 828 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 901 (992)
.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 199 ~~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQR-----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEEECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cEEEEeccCceecccc-----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8999999999876432 12346899999999999999999999999999999999999999864
No 255
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.8e-37 Score=341.57 Aligned_cols=280 Identities=22% Similarity=0.356 Sum_probs=204.6
Q ss_pred HHhcCCCCCCccccccceEEEEeEEC-CCCeEEEEEEeeccC--CCchhHHHHHHHHHHhc---cCCcceeEEEEeeccc
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLG-ENGMMVAVKVINLKQ--KGASNGFVAECQALRNI---RHRNLIKIITICSSID 749 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~ 749 (992)
...++|++.+.||+|+||+||+|++. .+++.||+|+++... ......+.+|+.+++.+ +||||+++++++....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 34578999999999999999999994 678999999986443 22344677888888777 8999999999986444
Q ss_pred ccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcE
Q 037275 750 FKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVA 829 (992)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 829 (992)
.......++||||++ |+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~ 159 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQI 159 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCT----TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCE
Confidence 445677899999997 699999986542 2489999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHH
Q 037275 830 HLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLH 909 (992)
Q Consensus 830 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~ 909 (992)
||+|||.++..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..... ...
T Consensus 160 kl~Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~ 229 (326)
T 1blx_A 160 KLADFGLARIYSFQ---------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLG 229 (326)
T ss_dssp EECSCCSCCCCCGG---------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH
T ss_pred EEecCcccccccCC---------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHH
Confidence 99999999765421 11233568999999999999999999999999999999999999998643211 011
Q ss_pred HHHhhh-CCh--hHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 910 EFARTA-LPD--KVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 910 ~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
...... .+. .+...... ...... .................+.+++.+||+.||++|||+.|+++
T Consensus 230 ~i~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 230 KILDVIGLPGEEDWPRDVAL-PRQAFH---SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHHCCCCGGGSCTTCSS-CGGGSC---CCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCCcccCcccccc-chhhhc---ccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111000 000 00000000 000000 00000000000122456889999999999999999999985
No 256
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=7.4e-38 Score=340.00 Aligned_cols=255 Identities=22% Similarity=0.284 Sum_probs=185.2
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC--chhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG--ASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||+||+|++..+++.||+|+++..... ..+.+.++...++.++||||+++++++. ....
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-----~~~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REGD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-----ccCC
Confidence 46899999999999999999999989999999999644221 1233445555678889999999999964 3456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||++ |+|.+++...... ...+++..++.++.|++.||+|||++. +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred EEEEEehhc-cchHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecC
Confidence 799999997 5998888754321 346999999999999999999999852 89999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccc----cCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYG----MGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
.++...... ......||+.|+|||++ .+..++.++||||+||++|+|++|+.||.............
T Consensus 156 ~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 226 (290)
T 3fme_A 156 ISGYLVDDV---------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226 (290)
T ss_dssp -----------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH
T ss_pred Ccccccccc---------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH
Confidence 998664321 11223589999999995 56678999999999999999999999997532211111111
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.. ... .. . .......++.+++.+||+.||++|||++|+++
T Consensus 227 ------------~~----~~~----~~-~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 ------------VE----EPS----PQ-L-----PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ------------HH----SCC----CC-C-----CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------------hc----cCC----CC-c-----ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 00 000 00 0 00112345889999999999999999999987
No 257
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.3e-38 Score=345.13 Aligned_cols=272 Identities=22% Similarity=0.312 Sum_probs=184.5
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
...++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++.. ..
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 86 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-----KD 86 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-----SS
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-----cC
Confidence 34568999999999999999999998889999999986433 3345678899999999999999999998643 34
Q ss_pred eEEEEEEeccCCCHHHHHhhcccch--hhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEe
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQ--EARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLG 832 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 832 (992)
..++||||+++++|.+++....... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 5799999999999999997532211 123589999999999999999999999 99999999999999999999999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
|||.+.......... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ....
T Consensus 164 dfg~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~ 239 (303)
T 2vwi_A 164 DFGVSAFLATGGDIT---RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLT 239 (303)
T ss_dssp CCHHHHHCC------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHHH
T ss_pred eccchheeccCCCcc---chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHHH
Confidence 999998664321100 1112234568999999999876 5689999999999999999999999976432211 0000
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.....+....... ..........++.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 240 LQNDPPSLETGVQ------------------DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HTSSCCCTTC-----------------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hccCCCccccccc------------------cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000000000000 00000112345889999999999999999999986
No 258
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7.4e-37 Score=340.31 Aligned_cols=274 Identities=19% Similarity=0.264 Sum_probs=202.0
Q ss_pred hcCCCCCCccccccceEEEEeEE-CCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCc------ceeEEEEeecccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNL-GENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRN------LIKIITICSSIDF 750 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 750 (992)
.++|++.+.||+|+||+||+|.+ ..+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~---- 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE---- 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc----
Confidence 35899999999999999999998 557899999998632 234567889999999997665 999999864
Q ss_pred cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC-----
Q 037275 751 KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ----- 825 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----- 825 (992)
.....++||||+ +++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 88 -~~~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 88 -HHGHICIVFELL-GLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp -ETTEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEE
T ss_pred -cCCcEEEEEcCC-CCCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccc
Confidence 345679999999 8899999976542 2588999999999999999999999 9999999999999987
Q ss_pred --------------CCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHH
Q 037275 826 --------------DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEM 891 (992)
Q Consensus 826 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 891 (992)
++.+||+|||.++..... .....||+.|+|||++.+..++.++|||||||++|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 227 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEY 227 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTSC-----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHH
T ss_pred ccCCccccccccccCCCceEeeCcccccCccc-----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHH
Confidence 668999999999864321 1234689999999999999999999999999999999
Q ss_pred HhCCCCCCCCccCCccHHHHHh--hhCChhHHHHHHhhHh--------------HhhhccCCCCCCccccchHHHHHHHH
Q 037275 892 FTRRRPTDGMFNQGLTLHEFAR--TALPDKVMEIVDSVLL--------------LEVQASNSRSCGDERLRTEERLVAVV 955 (992)
Q Consensus 892 ltg~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~ 955 (992)
++|+.||......+ ....... ...+............ .......................++.
T Consensus 228 ~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (339)
T 1z57_A 228 YLGFTVFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306 (339)
T ss_dssp HHSSCSCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHH
T ss_pred HhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHH
Confidence 99999998643221 1111111 1112111110000000 00000000000000111234467799
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 037275 956 ETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 956 ~li~~cl~~dP~~RPs~~evl~ 977 (992)
+++.+||+.||++|||++|+++
T Consensus 307 ~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 307 DLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHhCcCcccccCHHHHhc
Confidence 9999999999999999999975
No 259
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=346.65 Aligned_cols=255 Identities=23% Similarity=0.317 Sum_probs=198.8
Q ss_pred hcCCCCCCccccccceEEEEeEEC---CCCeEEEEEEeeccC----CCchhHHHHHHHHHHhc-cCCcceeEEEEeeccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLG---ENGMMVAVKVINLKQ----KGASNGFVAECQALRNI-RHRNLIKIITICSSID 749 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 749 (992)
.++|++.++||+|+||+||+|+.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--- 129 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ--- 129 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE---
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe---
Confidence 358999999999999999999984 478999999986332 23445677899999999 6999999999864
Q ss_pred ccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcE
Q 037275 750 FKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVA 829 (992)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 829 (992)
.....++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 130 --~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 130 --TETKLHLILDYINGGELFTHLSQRE------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp --ETTEEEEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred --eCceEEEEeecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcE
Confidence 3456799999999999999997543 489999999999999999999999 99999999999999999999
Q ss_pred EEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC--CcCcccchhhHHHHHHHHHhCCCCCCCCccCCcc
Q 037275 830 HLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG--EASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLT 907 (992)
Q Consensus 830 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~ 907 (992)
||+|||+++...... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||........
T Consensus 199 kl~DfG~a~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~- 270 (355)
T 1vzo_A 199 VLTDFGLSKEFVADE-------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS- 270 (355)
T ss_dssp EESCSSEEEECCGGG-------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-
T ss_pred EEeeCCCCeecccCC-------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-
Confidence 999999998654321 1122345699999999998863 578899999999999999999999975432211
Q ss_pred HHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 037275 908 LHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM-----EMRDVVAK 978 (992)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 978 (992)
... +......... ..+ .+....+.+++.+||+.||++|| |++|+++.
T Consensus 271 ~~~------------~~~~~~~~~~------~~~------~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 271 QAE------------ISRRILKSEP------PYP------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHH------------HHHHHHHCCC------CCC------TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHH------------HHHHHhccCC------CCC------cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 111 1111110000 000 11234578999999999999999 99999864
No 260
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.4e-37 Score=347.56 Aligned_cols=276 Identities=19% Similarity=0.259 Sum_probs=197.9
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC--chhHHHHHHHHHHhccCCcceeEEEEeecccc-cCcc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG--ASNGFVAECQALRNIRHRNLIKIITICSSIDF-KGVD 754 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 754 (992)
.++|.+.+.||+|+||+||+|.+..+|+.||||++...... ....+.+|+.+++.++||||+++++++..... ....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35889999999999999999999999999999999644322 24678899999999999999999999764332 1222
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+. ++|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM--------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECST
T ss_pred eEEEEEcccc-ccHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEec
Confidence 3489999996 688888742 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
|.++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+....+ .+.....
T Consensus 189 g~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~ 256 (371)
T 4exu_A 189 GLARHADAE-----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 256 (371)
T ss_dssp TCC-------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred CcccccccC-----------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH
Confidence 999855321 223468999999999877 689999999999999999999999998643221 1111111
Q ss_pred hh-CC-hhHHHHHHhhHhHhhhccCCCCCCcc-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TA-LP-DKVMEIVDSVLLLEVQASNSRSCGDE-RLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.. .+ ......+.......+........... ..........+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 257 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 11 11 11100000000000000000000000 0000112456899999999999999999999985
No 261
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=348.50 Aligned_cols=210 Identities=22% Similarity=0.341 Sum_probs=158.6
Q ss_pred cCCCC-CCccccccceEEEEeEEC--CCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 679 NDFSS-SNMIGQGSFGFVYKGNLG--ENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 679 ~~~~~-~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
+.|++ .++||+|+||+||+|++. .+++.||||++... .....+.+|+.++++++||||+++++++.. .....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLS---HADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCe
Confidence 34665 568999999999999965 46889999998533 334578899999999999999999999743 33567
Q ss_pred EEEEEEeccCCCHHHHHhhcccc---hhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee----CCCCc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQ---QEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL----DQDLV 828 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~ 828 (992)
.++||||++ |+|.+++...... .....+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 799999996 5898888754321 1123489999999999999999999999 99999999999999 67889
Q ss_pred EEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCCc
Q 037275 829 AHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGMF 902 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~~ 902 (992)
+||+|||+|+....... .........||+.|+|||++.+. .++.++||||+||++|||++|++||.+..
T Consensus 171 ~kl~Dfg~a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 240 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 240 (405)
T ss_dssp EEECCTTCCC---------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred EEEEECCCceecCCCCc-----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence 99999999987653211 11223345789999999998874 58999999999999999999999997643
No 262
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.8e-37 Score=345.14 Aligned_cols=255 Identities=22% Similarity=0.304 Sum_probs=195.1
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-CchhHHHHHHHH-HHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-GASNGFVAECQA-LRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||+||+|++..+|+.||||+++.... ....++..|..+ ++.++||||+++++++.. ...
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~-----~~~ 124 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-----EGD 124 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC-----SSC
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe-----CCc
Confidence 4578889999999999999999988999999999964432 233455566665 777899999999999643 446
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++ +|.+++...... ...+++..++.++.|++.||+|||++. +|+||||||+||+++.++.+||+|||
T Consensus 125 ~~lv~e~~~~-~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 125 VWICMELMDT-SLDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT--SCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCS
T ss_pred EEEEHHHhhC-cHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCC
Confidence 7999999975 999998753221 346899999999999999999999742 89999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCccccccccccccccc----CCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM----GGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.........+.
T Consensus 200 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~-- 268 (340)
T 3an0_A 200 ISGYLVDSV---------AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK-- 268 (340)
T ss_dssp HHHHHSCHH---------HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH--
T ss_pred Cceeccccc---------ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHH--
Confidence 998664311 111235899999999964 34789999999999999999999999975322111111
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
..+. ... ... .......++.+++.+||+.||++|||+.|+++
T Consensus 269 ----------~~~~----~~~-----~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 269 ----------QVVE----EPS-----PQL-----PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ----------HHHH----SCC-----CCC-----CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----------HHhc----CCC-----CCC-----CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1110 000 000 00112346899999999999999999999986
No 263
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.2e-36 Score=329.62 Aligned_cols=254 Identities=26% Similarity=0.323 Sum_probs=201.2
Q ss_pred HHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEeecccccC
Q 037275 675 SKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKG 752 (992)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 752 (992)
....++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|+.++++++||||+++++++. .
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 92 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----D 92 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----C
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe-----C
Confidence 344568999999999999999999998899999999996443 345677899999999999999999999964 3
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC---CcE
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD---LVA 829 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~ 829 (992)
....++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.+ +.+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~ 163 (287)
T 2wei_A 93 SSSFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI 163 (287)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCeEEEEEEccCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccE
Confidence 456799999999999999987543 489999999999999999999999 99999999999999754 479
Q ss_pred EEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHH
Q 037275 830 HLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLH 909 (992)
Q Consensus 830 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~ 909 (992)
||+|||.+....... ......|++.|+|||++.+ .++.++||||||+++|+|++|+.||.+....
T Consensus 164 kL~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----- 228 (287)
T 2wei_A 164 KIIDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY----- 228 (287)
T ss_dssp EECSTTGGGTBCCCS---------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----
T ss_pred EEeccCcceeecCCC---------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-----
Confidence 999999998654321 1223458999999998765 4899999999999999999999999763211
Q ss_pred HHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 910 EFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+............ ..........++.+++.+||+.||++|||+.|+++
T Consensus 229 ------------~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 229 ------------DILKRVETGKYAF--------DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ------------HHHHHHHHCCCCC--------CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ------------HHHHHHHcCCCCC--------CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0111111110000 00000112345889999999999999999999987
No 264
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=353.22 Aligned_cols=329 Identities=19% Similarity=0.161 Sum_probs=203.8
Q ss_pred ccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEecc
Q 037275 148 KLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLP 227 (992)
Q Consensus 148 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 227 (992)
++++|+|++|++++..|..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 45666666666665556667777777777777777766667777777777777777777775444556677777777777
Q ss_pred CCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCC
Q 037275 228 TNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTG 307 (992)
Q Consensus 228 ~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 307 (992)
+|++.+ ..|..|..+++|++|++++|.+++..+..|..+++|++|+|++|+++.+
T Consensus 113 ~n~i~~-------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 113 ENKIVI-------------------------LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp TSCCCE-------------------------ECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCcccc-------------------------CChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 776652 2344566677777777777777777777777777777777777766543
Q ss_pred CCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCC
Q 037275 308 EANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTI 387 (992)
Q Consensus 308 ~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 387 (992)
+. ..|.++++|+.|+|++|.+.+..
T Consensus 168 ~~-------------------------------------------------------~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 168 PT-------------------------------------------------------EALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp CH-------------------------------------------------------HHHTTCTTCCEEEEESCCCCEEC
T ss_pred Ch-------------------------------------------------------hHhcccCCCcEEeCCCCcCcEeC
Confidence 21 11223334444444444444333
Q ss_pred CccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhc
Q 037275 388 PHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSIS 467 (992)
Q Consensus 388 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~ 467 (992)
+..|..+++|+.|++++|.+.+.+|.......+|+.|+|++|++++..+..|..+++|+.|++
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L----------------- 255 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNL----------------- 255 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEEC-----------------
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeEC-----------------
Confidence 334444444444444444444344444444445555555555555333334555555555533
Q ss_pred ccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEEC
Q 037275 468 TLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDM 547 (992)
Q Consensus 468 ~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 547 (992)
++|.+++..+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|
T Consensus 256 --------s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 327 (477)
T 2id5_A 256 --------SYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLIL 327 (477)
T ss_dssp --------CSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEEC
T ss_pred --------CCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEc
Confidence 333333334445666777777777788777777778888888888888888888766677788888888888
Q ss_pred CCcccCCCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 548 SSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 548 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
++|.+... ....+-...+..+++.++...|..|.
T Consensus 328 ~~N~l~c~-c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 328 DSNPLACD-CRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CSSCEECS-GGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred cCCCccCc-cchHhHHhhhhccccCccCceeCCch
Confidence 88888743 22222233445566777777776664
No 265
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.9e-37 Score=335.21 Aligned_cols=265 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeeccc-------
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSID------- 749 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 749 (992)
..++|++.+.||+|+||.||+|++..+++.||||++... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 346799999999999999999999889999999999632 234567889999999999999999999875421
Q ss_pred -ccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc
Q 037275 750 -FKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV 828 (992)
Q Consensus 750 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 828 (992)
.......++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENL-----NQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCG-----GGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcccc-----ccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 1335678999999999999999986432 478899999999999999999999 9999999999999999999
Q ss_pred EEEeecccceecCCCCCCCC------cccCCCCCcccccccccccccccCC-CcCcccchhhHHHHHHHHHhCCCCCCCC
Q 037275 829 AHLGDFGLAKFLSSSPLDTA------VETPSSSKGIKGTVGYIAPEYGMGG-EASMTGDVYSFGILLLEMFTRRRPTDGM 901 (992)
Q Consensus 829 ~kl~Dfg~a~~~~~~~~~~~------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~elltg~~pf~~~ 901 (992)
+||+|||.+........... ...........||+.|+|||++.+. .++.++||||+||++|||++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 99999999987653211000 0001122345689999999998764 68999999999999999998 54321
Q ss_pred ccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 902 FNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.+. ............ ..... ........+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~----------------~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 MER----------------VNILKKLRSVSI--EFPPD------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHH----------------HHHHHHHHSTTC--CCCTT------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhH----------------HHHHHhcccccc--ccCcc------ccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 100 011111100000 00000 01122345789999999999999999999986
No 266
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=9.7e-37 Score=337.69 Aligned_cols=257 Identities=21% Similarity=0.289 Sum_probs=175.2
Q ss_pred hcCCCCCC-ccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 678 TNDFSSSN-MIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 678 ~~~~~~~~-~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
.++|++.+ +||+|+||+||+|++..+++.||||++... .....+....++.++||||+++++++.... .+....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMH-HGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCceE
Confidence 45888854 699999999999999989999999998532 122223333466779999999999975422 235567
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC---CCcEEEee
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ---DLVAHLGD 833 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~D 833 (992)
++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-C----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred EEEEeccCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 999999999999999986542 2589999999999999999999999 9999999999999976 45699999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHh
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFAR 913 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~ 913 (992)
||+++...... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...........
T Consensus 175 fg~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---- 240 (336)
T 3fhr_A 175 FGFAKETTQNA----------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG---- 240 (336)
T ss_dssp CTTCEEC--------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred cccceeccccc----------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh----
Confidence 99998654321 1234589999999999888999999999999999999999999976432211000
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
............. .........++.+++.+||+.||++|||++|+++
T Consensus 241 ---------~~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 241 ---------MKRRIRLGQYGFP--------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -------------------CCC--------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---------HHHhhhccccccC--------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000000000000 0000112345889999999999999999999987
No 267
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.5e-36 Score=361.29 Aligned_cols=177 Identities=13% Similarity=0.100 Sum_probs=104.5
Q ss_pred CCCCCCCCCcCCCCCCc----eEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCC
Q 037275 23 DPLGVTSSWNNSTNLCQ----WTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLV 98 (992)
Q Consensus 23 ~~~~~~~~w~~~~~~c~----w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 98 (992)
+....+++|..+.+||. |.++.|+ .+ ++-..... .....-..+.+++.|++++|.+....+..+..++
T Consensus 4 ~~~~~l~~~~~~~~C~~~~~~~~c~~~~---~~---i~~~~~~~--~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~ 75 (597)
T 3oja_B 4 QQRYNVKPRQPEYKCIDSNLQYDCVFYD---VH---IDMQTQDV--YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFR 75 (597)
T ss_dssp -------CCCSEECCCCC--CCSEEECS---CE---ECSSCCCC--EESCSSGGGCCCSEEEESSCEESEECTHHHHHCC
T ss_pred cccccccCCCCCCcCcccCcCceeEecC---ce---eccccccc--ccCcccccCCCceEEEeeCCCCCCcCHHHHccCC
Confidence 34445689998888884 5555443 11 11111111 1111122467778888888888743344567788
Q ss_pred CCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEe
Q 037275 99 RLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINV 178 (992)
Q Consensus 99 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 178 (992)
+|++|+|++|.+++..|..|+.+++|++|+|++|.++ +..|..|+++++|++|+|
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-------------------------~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-------------------------YLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-------------------------CCCTTTTTTCTTCCEEEC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC-------------------------CCCHHHHcCCCCCCEEEe
Confidence 8888888888887655566666666666666666555 344445556666666666
Q ss_pred cCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccC
Q 037275 179 LGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFN 232 (992)
Q Consensus 179 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~ 232 (992)
++|.+.+..+..|+++++|++|+|++|.+++..|..|..+++|++|++++|.++
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 666664444444566667777777777776666666666677777776666665
No 268
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=339.76 Aligned_cols=263 Identities=21% Similarity=0.284 Sum_probs=196.0
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEeecccccCcc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 754 (992)
..++|++.+.||+|+||.||+|++.. .||+|+++... ....+.+.+|+.++++++||||+++++++.. ..
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~ 102 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-----PP 102 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-----SS
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----CC
Confidence 35689999999999999999999853 49999986432 2334567889999999999999999999653 44
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++ ++.+||+||
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Df 173 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAKI-----VLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDF 173 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSCC-----CCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCC
T ss_pred ceEEEeecccCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeec
Confidence 57999999999999999976432 488999999999999999999999 999999999999998 679999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccC---------CCcCcccchhhHHHHHHHHHhCCCCCCCCccCC
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG---------GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQG 905 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~ 905 (992)
|+++......... .........|++.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 174 g~~~~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~- 249 (319)
T 2y4i_B 174 GLFSISGVLQAGR---REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE- 249 (319)
T ss_dssp SCCC-------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-
T ss_pred CCccccccccccc---cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 9987654221110 1122233468999999998864 35788999999999999999999999753211
Q ss_pred ccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 906 LTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
................. ....++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 250 ----------------~~~~~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 250 ----------------AIIWQMGTGMKPNLSQI----------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp ----------------HHHHHHHTTCCCCCCCS----------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred ----------------HHHHHhccCCCCCCCcC----------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 01111100000000000 1123488999999999999999999999999988765
Q ss_pred h
Q 037275 986 F 986 (992)
Q Consensus 986 ~ 986 (992)
.
T Consensus 304 ~ 304 (319)
T 2y4i_B 304 N 304 (319)
T ss_dssp -
T ss_pred h
Confidence 3
No 269
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=9.8e-37 Score=365.38 Aligned_cols=259 Identities=23% Similarity=0.355 Sum_probs=203.2
Q ss_pred hcCCCCCCccccccceEEEEeEECC---CCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGE---NGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGV 753 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 753 (992)
.++|++.+.||+|+||+||+|.+.. .+..||+|+++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~------ 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec------
Confidence 4678899999999999999999853 356899999864332 234678999999999999999999998632
Q ss_pred ceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEee
Q 037275 754 DFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGD 833 (992)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 833 (992)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~D 534 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 534 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTT-----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CceEEEEEcCCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEe
Confidence 34589999999999999997543 2489999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccHHHHH
Q 037275 834 FGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 834 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~~~~ 912 (992)
||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....
T Consensus 535 FG~a~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-------- 599 (656)
T 2j0j_A 535 FGLSRYMEDSTY-------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-------- 599 (656)
T ss_dssp CCCCCSCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------
T ss_pred cCCCeecCCCcc-------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--------
Confidence 999987643221 11122346789999999988899999999999999999997 99999763211
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDT 985 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 985 (992)
+.......... .... ......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 600 ---------~~~~~i~~~~~-~~~~----------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 600 ---------DVIGRIENGER-LPMP----------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ---------HHHHHHHHTCC-CCCC----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHcCCC-CCCC----------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 01111110000 0000 11234688999999999999999999999999998765
No 270
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.5e-37 Score=344.09 Aligned_cols=265 Identities=22% Similarity=0.317 Sum_probs=199.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCc---h--------------hHHHHHHHHHHhccCCccee
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGA---S--------------NGFVAECQALRNIRHRNLIK 740 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~--------------~~~~~E~~~l~~l~h~niv~ 740 (992)
.++|++.+.||+|+||.||+|++ +++.||||++....... . +.+.+|+.++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 45899999999999999999999 89999999996432111 1 78999999999999999999
Q ss_pred EEEEeecccccCcceEEEEEEeccCCCHHHH------HhhcccchhhcccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEe
Q 037275 741 IITICSSIDFKGVDFQAIVYEYMQNGSLEDW------LHQSEDQQEARSLTLIQRINIIIDVASAIEYIHH-HCQPPVVH 813 (992)
Q Consensus 741 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH 813 (992)
+++++.. .+..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ + +|+|
T Consensus 108 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H 175 (348)
T 2pml_X 108 CEGIITN-----YDEVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICH 175 (348)
T ss_dssp CSEEEES-----SSEEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred EEEEEee-----CCeEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHhccC---CEee
Confidence 9999643 4567999999999999998 44321 2468999999999999999999999 8 9999
Q ss_pred ccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCC-CcCc-ccchhhHHHHHHHH
Q 037275 814 GDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGG-EASM-TGDVYSFGILLLEM 891 (992)
Q Consensus 814 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DiwSlG~il~el 891 (992)
|||||+||+++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++|||||||++|||
T Consensus 176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l 245 (348)
T 2pml_X 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245 (348)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHH
T ss_pred cCCChHhEEEcCCCcEEEeccccccccccc----------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHH
Confidence 999999999999999999999999876432 12234689999999999887 6666 99999999999999
Q ss_pred HhCCCCCCCCccCCccHHHHHhhhC--ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCC
Q 037275 892 FTRRRPTDGMFNQGLTLHEFARTAL--PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTER 969 (992)
Q Consensus 892 ltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 969 (992)
++|+.||.................. +.......... ..............++.+++.+||+.||++|
T Consensus 246 ~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 314 (348)
T 2pml_X 246 FYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPL-----------TNKKSTCSNNFLSNEDIDFLKLFLRKNPAER 314 (348)
T ss_dssp HHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTT-----------CC--------CCCHHHHHHHHHHCCSSGGGS
T ss_pred HhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccc-----------cccccccchhhcCHHHHHHHHHHccCChhhC
Confidence 9999999864332111111110000 00000000000 0000000001224568899999999999999
Q ss_pred CCHHHHHH
Q 037275 970 MEMRDVVA 977 (992)
Q Consensus 970 Ps~~evl~ 977 (992)
||++|+++
T Consensus 315 ps~~e~l~ 322 (348)
T 2pml_X 315 ITSEDALK 322 (348)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHhc
Confidence 99999986
No 271
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.5e-36 Score=337.20 Aligned_cols=274 Identities=18% Similarity=0.249 Sum_probs=199.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCC-eEEEEEEeeccCCCchhHHHHHHHHHHhccCCc------ceeEEEEeecccc
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENG-MMVAVKVINLKQKGASNGFVAECQALRNIRHRN------LIKIITICSSIDF 750 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 750 (992)
.++|++.+.||+|+||+||+|.+..++ +.||+|+++.. ....+.+.+|+.++++++|++ ++.+.+++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~---- 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN---- 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE----
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee----
Confidence 358999999999999999999997666 79999998632 234567888999999998766 888888753
Q ss_pred cCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeee-------
Q 037275 751 KGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLL------- 823 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll------- 823 (992)
.....++||||+ ++++.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||++
T Consensus 93 -~~~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 93 -FHGHMCIAFELL-GKNTFEFLKENNF----QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp -ETTEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEE
T ss_pred -eCCeEEEEEecc-CCChHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccc
Confidence 345679999999 6788887765432 2589999999999999999999999 99999999999999
Q ss_pred ------------CCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHH
Q 037275 824 ------------DQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEM 891 (992)
Q Consensus 824 ------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 891 (992)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 232 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTSC-----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCcEEEeecCcccccccc-----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHH
Confidence 56789999999999864322 1234689999999999999999999999999999999
Q ss_pred HhCCCCCCCCccCCccHHHHH--hhhCChhHHHHHHhhHh--------------HhhhccCCCCCCccccchHHHHHHHH
Q 037275 892 FTRRRPTDGMFNQGLTLHEFA--RTALPDKVMEIVDSVLL--------------LEVQASNSRSCGDERLRTEERLVAVV 955 (992)
Q Consensus 892 ltg~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~ 955 (992)
++|+.||....... ...... ....|............ ..+....................++.
T Consensus 233 ~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 311 (355)
T 2eu9_A 233 YRGFTLFQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLF 311 (355)
T ss_dssp HHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHH
T ss_pred HhCCCCCCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHH
Confidence 99999998643221 111111 11122211110000000 00000000000000111223456789
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 037275 956 ETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 956 ~li~~cl~~dP~~RPs~~evl~ 977 (992)
+++.+||+.||++|||++|+++
T Consensus 312 ~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 312 DLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHhcCChhhCcCHHHHhc
Confidence 9999999999999999999974
No 272
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=340.45 Aligned_cols=275 Identities=19% Similarity=0.246 Sum_probs=196.9
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC--chhHHHHHHHHHHhccCCcceeEEEEeecccc-cCcce
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG--ASNGFVAECQALRNIRHRNLIKIITICSSIDF-KGVDF 755 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 755 (992)
++|.+.+.||+|+||.||+|++..+|+.||||++...... ..+.+.+|+.+++.++||||+++++++..... .....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 5789999999999999999999989999999998643322 24568899999999999999999999754321 11234
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||++ |+|.+++.. .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 104 ~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL--------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred EEEEecccc-CCHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecc
Confidence 589999997 588877642 389999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccC-CCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-GEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFART 914 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~ 914 (992)
.++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+....+ .+......
T Consensus 172 ~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~ 239 (353)
T 3coi_A 172 LARHADAE-----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKV 239 (353)
T ss_dssp CTTC-------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHH
T ss_pred cccCCCCC-----------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 99754321 123468999999999877 678999999999999999999999997643211 11111111
Q ss_pred h-C-ChhHHHHHHhhHhHhhhccCCCC-CCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 915 A-L-PDKVMEIVDSVLLLEVQASNSRS-CGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 915 ~-~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
. . +......+.......+....... ...-.........++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 0 11110000000000000000000 00000001123456899999999999999999999985
No 273
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2e-36 Score=341.61 Aligned_cols=278 Identities=18% Similarity=0.259 Sum_probs=200.7
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-----------CCcceeEEEEee
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR-----------HRNLIKIITICS 746 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 746 (992)
.++|++.+.||+|+||+||+|++..+++.||||++.. .......+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC-CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 3589999999999999999999988999999999863 2233466789999999886 899999999876
Q ss_pred cccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC--
Q 037275 747 SIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD-- 824 (992)
Q Consensus 747 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-- 824 (992)
... ......++||||+ +++|.+++..... ..+++..++.++.||+.||+|||++. +|+||||||+||+++
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKKYEH----RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHHhhc----cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 432 2344779999999 8899999986542 25899999999999999999999953 799999999999994
Q ss_pred ----CCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCC
Q 037275 825 ----QDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDG 900 (992)
Q Consensus 825 ----~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 900 (992)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH-----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC-----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CCCcCcceEEEcccccccccCCC-----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 4458999999999876432 1223689999999999999999999999999999999999999986
Q ss_pred CccCCc-----cHHHHHhh--hCChhHHHHHHhhHhHhh-hcc-CCCCCCc------------cccchHHHHHHHHHHHh
Q 037275 901 MFNQGL-----TLHEFART--ALPDKVMEIVDSVLLLEV-QAS-NSRSCGD------------ERLRTEERLVAVVETGV 959 (992)
Q Consensus 901 ~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~------------~~~~~~~~~~~l~~li~ 959 (992)
...... ........ ..|.....- ......+ ... ....... ..........++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 315 (373)
T 1q8y_A 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRN--GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLS 315 (373)
T ss_dssp -------CHHHHHHHHHHHHCSCCHHHHHH--CTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHG
T ss_pred CcccccCChHHHHHHHHHhcCCCCHHHHhc--cchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHH
Confidence 432211 11111110 011111000 0000000 000 0000000 00112355678999999
Q ss_pred hccCCCCCCCCCHHHHHH
Q 037275 960 VCSMESPTERMEMRDVVA 977 (992)
Q Consensus 960 ~cl~~dP~~RPs~~evl~ 977 (992)
+||+.||++|||++|+++
T Consensus 316 ~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 316 PMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp GGGCSSTTTCBCHHHHHT
T ss_pred HHhccCccccCCHHHHhh
Confidence 999999999999999986
No 274
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.6e-36 Score=333.70 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=197.2
Q ss_pred HHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC------chhHHHHHHHHHHhcc--CCcceeEEEEeec
Q 037275 676 KATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG------ASNGFVAECQALRNIR--HRNLIKIITICSS 747 (992)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~ 747 (992)
...++|++.+.||+|+||.||+|++..+++.||||++...... ....+.+|+.++++++ ||||+++++++.
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~- 118 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE- 118 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE-
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe-
Confidence 3456899999999999999999999989999999999754322 2355778999999996 599999999964
Q ss_pred ccccCcceEEEEEEeccC-CCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeC-C
Q 037275 748 IDFKGVDFQAIVYEYMQN-GSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLD-Q 825 (992)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~ 825 (992)
.....++||||+.+ ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++ +
T Consensus 119 ----~~~~~~lv~e~~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 119 ----RPDSFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLN 185 (320)
T ss_dssp ----CSSEEEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETT
T ss_pred ----cCCcEEEEEEcCCCCccHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCC
Confidence 34567999999976 89999997643 589999999999999999999999 999999999999998 7
Q ss_pred CCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCCCCccC
Q 037275 826 DLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTDGMFNQ 904 (992)
Q Consensus 826 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~ 904 (992)
++.+||+|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 186 ~~~~kL~Dfg~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-- 253 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDTV----------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-- 253 (320)
T ss_dssp TTEEEECCCTTCEECCSSC----------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--
T ss_pred CCCEEEeeCcccccccccc----------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--
Confidence 8999999999998765321 123458999999999877665 688999999999999999999996421
Q ss_pred CccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 905 GLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
...... . ... .....++.+++.+||+.||++|||++|+++
T Consensus 254 -----~~~~~~----------------~--~~~----------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 254 -----EIIRGQ----------------V--FFR----------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -----HHHHCC----------------C--CCS----------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----hhhccc----------------c--ccc----------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 0 000 011345889999999999999999999986
No 275
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.8e-36 Score=332.68 Aligned_cols=256 Identities=24% Similarity=0.361 Sum_probs=192.4
Q ss_pred HHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--CchhHHHHHHHHHHhcc--CCcceeEEEEeeccc
Q 037275 674 LSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--GASNGFVAECQALRNIR--HRNLIKIITICSSID 749 (992)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~ 749 (992)
+....++|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~--- 98 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI--- 98 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE---
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee---
Confidence 3344568999999999999999999986 689999999975432 23467899999999997 599999999864
Q ss_pred ccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcE
Q 037275 750 FKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVA 829 (992)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 829 (992)
.....++||| +.+++|.+++.... .+++..++.++.|+++||+|||++ +|+||||||+||+++ ++.+
T Consensus 99 --~~~~~~lv~e-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~ 165 (313)
T 3cek_A 99 --TDQYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGML 165 (313)
T ss_dssp --CSSEEEEEEC-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEE
T ss_pred --cCCEEEEEEe-cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeE
Confidence 3456799999 55889999998643 589999999999999999999999 999999999999996 4899
Q ss_pred EEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC-----------CCcCcccchhhHHHHHHHHHhCCCCC
Q 037275 830 HLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-----------GEASMTGDVYSFGILLLEMFTRRRPT 898 (992)
Q Consensus 830 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwSlG~il~elltg~~pf 898 (992)
||+|||++........ ........|++.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 166 kL~Dfg~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf 239 (313)
T 3cek_A 166 KLIDFGIANQMQPDTT------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239 (313)
T ss_dssp EECCCSSSCC--------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred EEeeccccccccCccc------cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCch
Confidence 9999999987643221 111223468999999999865 46888999999999999999999999
Q ss_pred CCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 037275 899 DGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAK 978 (992)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 978 (992)
......... .....+. .... .... ....++.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~------------~~~~~~~----~~~~----~~~~------~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 240 QQIINQISK------------LHAIIDP----NHEI----EFPD------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp TTCCSHHHH------------HHHHHCT----TSCC----CCCC------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhHHHHHHH------------HHHHHhc----cccc----CCcc------cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 753221100 1111110 0000 0000 012458899999999999999999999863
No 276
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=331.15 Aligned_cols=246 Identities=24% Similarity=0.350 Sum_probs=191.0
Q ss_pred HHHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC------CchhHHHHHHHHHHhc----cCCcceeEE
Q 037275 673 ELSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK------GASNGFVAECQALRNI----RHRNLIKII 742 (992)
Q Consensus 673 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~~~ 742 (992)
+.....++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 344556789999999999999999999988999999999964432 1234466799999999 899999999
Q ss_pred EEeecccccCcceEEEEEEe-ccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCe
Q 037275 743 TICSSIDFKGVDFQAIVYEY-MQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNV 821 (992)
Q Consensus 743 ~~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NI 821 (992)
+++. .....++|||| +.+++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||
T Consensus 105 ~~~~-----~~~~~~~v~e~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 170 (312)
T 2iwi_A 105 DWFE-----TQEGFMLVLERPLPAQDLFDYITEKG------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENI 170 (312)
T ss_dssp EEC----------CEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGE
T ss_pred EEEe-----cCCeEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhE
Confidence 9854 34456899999 78999999997643 489999999999999999999999 999999999999
Q ss_pred eeC-CCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCc-CcccchhhHHHHHHHHHhCCCCCC
Q 037275 822 LLD-QDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEA-SMTGDVYSFGILLLEMFTRRRPTD 899 (992)
Q Consensus 822 ll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~ 899 (992)
+++ .++.+||+|||.++...... .....|++.|+|||++.+..+ +.++||||+||++|||++|+.||.
T Consensus 171 l~~~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 240 (312)
T 2iwi_A 171 LIDLRRGCAKLIDFGSGALLHDEP----------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240 (312)
T ss_dssp EEETTTTEEEECCCSSCEECCSSC----------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEeCCCCeEEEEEcchhhhcccCc----------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence 998 88999999999998765422 123458999999999877666 458999999999999999999996
Q ss_pred CCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 900 GMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
... + .... .. . .. .....++.+++.+||+.||++|||++|+++
T Consensus 241 ~~~-------~------------~~~~----~~--~----~~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 241 RDQ-------E------------ILEA----EL--H----FP------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp SHH-------H------------HHHT----CC--C----CC------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ChH-------H------------Hhhh----cc--C----Cc------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 420 0 0000 00 0 00 011345789999999999999999999986
No 277
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.7e-36 Score=355.01 Aligned_cols=286 Identities=22% Similarity=0.274 Sum_probs=204.1
Q ss_pred HhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccC-CCchhHHHHHHHHHHhccCCcceeEEEEeeccc-ccCcc
Q 037275 677 ATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQ-KGASNGFVAECQALRNIRHRNLIKIITICSSID-FKGVD 754 (992)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 754 (992)
..++|++.++||+|+||+||+|.+..+|+.||||+++... ....+.+.+|++++++++||||+++++++.... +....
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 3478999999999999999999998899999999986432 233467899999999999999999999875422 23356
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCc---EEE
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLV---AHL 831 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl 831 (992)
..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~---~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL 165 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKI 165 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSC---TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred eEEEEEEeCCCCCHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEE
Confidence 67999999999999999986542 23488889999999999999999999 9999999999999987764 999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+|||.+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+... ...|
T Consensus 166 ~DFG~a~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~ 232 (676)
T 3qa8_A 166 IDLGYAKELDQGE---------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQW 232 (676)
T ss_dssp CSCCCCCBTTSCC---------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHS
T ss_pred ccccccccccccc---------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhh
Confidence 9999998765322 12335689999999999999999999999999999999999999975311 1111
Q ss_pred HhhhCChhHHHH-HHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHH-----HHHHHHHHH
Q 037275 912 ARTALPDKVMEI-VDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRD-----VVAKLCRAR 983 (992)
Q Consensus 912 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~~~ 983 (992)
............ ......+... .....+............+.+++.+||..||++|||++| ..+.++.+.
T Consensus 233 ~~~i~~~~~~~~~~~~~l~g~~~--~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 233 HGKVREKSNEHIVVYDDLTGAVK--FSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp STTCC------CCSCCCCSSSCC--CCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhcccchhhhhhhhhccccc--cccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 111000000000 0000000000 000011111112234567899999999999999999988 445555544
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.2e-35 Score=332.41 Aligned_cols=349 Identities=17% Similarity=0.155 Sum_probs=217.2
Q ss_pred CCCCcCCCCCCc-eEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCc-cccCCCCCCEEEe
Q 037275 28 TSSWNNSTNLCQ-WTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPH-QIGRLVRLEALVL 105 (992)
Q Consensus 28 ~~~w~~~~~~c~-w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L 105 (992)
+++|..+.+||. |.++.|.....++ ............-..+.++++|++++|.++ .+|. .+..+++|++|+|
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L 76 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNL 76 (390)
T ss_dssp ----CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEEC
T ss_pred cCCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEEC
Confidence 578988888885 5555553222222 211111122223345788999999999998 5555 4688999999999
Q ss_pred ecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccC
Q 037275 106 ANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWG 185 (992)
Q Consensus 106 s~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~ 185 (992)
++|++++..|..++.+++|++|++++|+++ .+|+..+.++++|++|+|++|.++...+..|.++++|++|++++|.+.+
T Consensus 77 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~ 155 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER 155 (390)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCCcccccChhhccCCCCcCEEECCCCCCC-cCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCc
Confidence 999998666678888999999999988888 4444444477888888888888884433445778888888888888877
Q ss_pred CcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhh
Q 037275 186 RIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLS 265 (992)
Q Consensus 186 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~ 265 (992)
..|..|.++++|++|++++|++++. .+..+++|++|++++|.+++ +.
T Consensus 156 ~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~------------------------------~~ 202 (390)
T 3o6n_A 156 IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST------------------------------LA 202 (390)
T ss_dssp CCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE------------------------------EE
T ss_pred cChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc------------------------------cC
Confidence 6677788888888888888887743 35566777777777776651 11
Q ss_pred ccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccc
Q 037275 266 NASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANL 345 (992)
Q Consensus 266 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l 345 (992)
...+|++|++++|+++...... .++|++|++++|+++.. ..+..+++|+.|++++|++.+
T Consensus 203 ~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~n~l~~~--------~~l~~l~~L~~L~Ls~n~l~~--------- 262 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT--------AWLLNYPGLVEVDLSYNELEK--------- 262 (390)
T ss_dssp CCSSCSEEECCSSCCCEEECCC---CSSCCEEECCSSCCCCC--------GGGGGCTTCSEEECCSSCCCE---------
T ss_pred CCCcceEEECCCCeeeeccccc---cccccEEECCCCCCccc--------HHHcCCCCccEEECCCCcCCC---------
Confidence 2246777777777776543322 35677777777776543 124445555555555555544
Q ss_pred cccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCcee
Q 037275 346 SSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLA 425 (992)
Q Consensus 346 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 425 (992)
..|..|..+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+
T Consensus 263 ----------------~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 263 ----------------IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp ----------------EESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred ----------------cChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 444455555555555555555552 3444455555666666666555 3444455555666666
Q ss_pred ccCCcccCCCCCCccccccccccccccccccc
Q 037275 426 LSSNDLQGSIPPSLGNCKNLIELHMADIELTG 457 (992)
Q Consensus 426 L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 457 (992)
|++|+|++. + +..+++|+.|++++|++.+
T Consensus 325 L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 325 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 666665532 2 4455566666666666653
No 279
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.8e-36 Score=333.52 Aligned_cols=259 Identities=21% Similarity=0.249 Sum_probs=176.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC-CchhHHHHHHH-HHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-GASNGFVAECQ-ALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||.||+|.+..+|+.||||+++.... .....+..|+. +++.++||||+++++++.. .+.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-----~~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-----EGD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-----SSE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-----CCc
Confidence 3588999999999999999999998999999999975432 22344556665 6777899999999999643 456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++ +|.+++...... ....+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred eEEEEeecCC-ChHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCC
Confidence 7999999975 888888643211 1235899999999999999999999852 79999999999999999999999999
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccc----cCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHH
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYG----MGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEF 911 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~ 911 (992)
+++...... ......||+.|+|||++ .+..++.++|||||||++|+|++|+.||.+........
T Consensus 172 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--- 239 (327)
T 3aln_A 172 ISGQLVDSI---------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL--- 239 (327)
T ss_dssp SSCC---------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------
T ss_pred Cceeccccc---------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH---
Confidence 998654321 11223589999999998 45678999999999999999999999997532111000
Q ss_pred HhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 912 ARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
........ ..... .........+.+++.+||+.||++|||+.|+++
T Consensus 240 -------------~~~~~~~~-----~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 240 -------------TQVVKGDP-----PQLSN--SEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -------------CCCCCSCC-----CCCCC--CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------------HHHhcCCC-----CCCCC--cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00000000 00000 000112345889999999999999999999976
No 280
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.4e-36 Score=328.94 Aligned_cols=252 Identities=21% Similarity=0.260 Sum_probs=177.8
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCc--hhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGA--SNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|++.+.||+|+||.||+|++..+|+.||||++....... .+.+.++..+++.++||||+++++++. ....
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-----~~~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI-----TNTD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSSE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe-----cCCc
Confidence 457899999999999999999999899999999997543221 233445556788889999999999964 3456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHH-HCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
.++||||+ ++.+..+..... ..+++..++.++.|++.||+|||+ + +|+||||||+||+++.++.+||+||
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQ-----GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEecc-CCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEEC
Confidence 79999999 556666554322 258999999999999999999998 6 8999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCccccccccccccccc-----CCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHH
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM-----GGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLH 909 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~ 909 (992)
|.+....... ......|++.|+|||++. +..++.++|||||||++|||++|+.||.......
T Consensus 170 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---- 236 (318)
T 2dyl_A 170 GISGRLVDDK---------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---- 236 (318)
T ss_dssp TTC-----------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH----
T ss_pred CCchhccCCc---------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH----
Confidence 9997654321 122345899999999984 4578899999999999999999999997532211
Q ss_pred HHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 910 EFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
+.+......... ..+. ......++.+++.+||+.||++|||++|+++
T Consensus 237 ------------~~~~~~~~~~~~-----~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 237 ------------EVLTKVLQEEPP-----LLPG----HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ------------HHHHHHHHSCCC-----CCCS----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ------------HHHHHHhccCCC-----CCCc----cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111111111000 0000 0012345889999999999999999999986
No 281
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.1e-35 Score=327.13 Aligned_cols=274 Identities=18% Similarity=0.217 Sum_probs=220.3
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCCCCC----cCCCCCCceEeeEEc--------CCCCeEEEeeccccccCCccCCCCC
Q 037275 4 PSNETDRLALLAIGSQLEDDPLGVTSSW----NNSTNLCQWTGVTCG--------HRHQRVTKLDLSNRTIGGTLSPYVG 71 (992)
Q Consensus 4 ~~~~~~~~~ll~~~~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~--------~~~~~v~~ldl~~~~l~~~l~~~l~ 71 (992)
.+.++|++||++||+++..||.+++++| +.+.++|.|.||+|+ ....+|+.|||+++.+. .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 3567899999999999988999999999 567889999999995 23467999999999995 8999999
Q ss_pred CCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcc-------
Q 037275 72 NLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGY------- 144 (992)
Q Consensus 72 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~------- 144 (992)
.+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++.+++|++|++++|++.+.+|..+..
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 9999999999999999 89999999999999999999999 89999999999999999999999999987752
Q ss_pred -cccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcE
Q 037275 145 -NWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLEN 223 (992)
Q Consensus 145 -~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 223 (992)
++++|++|+|++|.++ .+|..++++++|++|++++|.+. .+|..++.+++|++|+|++|++.+.+|..+..+++|++
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 4677777777777777 66777777777777777777774 35556777777777777777777677777777777777
Q ss_pred EeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCC
Q 037275 224 VFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNN 303 (992)
Q Consensus 224 L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 303 (992)
|+|++|.+.+ .+|..+.++++|++|+|++|.+.+.+|..+..+++|+.+++..|.
T Consensus 258 L~L~~n~~~~-------------------------~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 258 LILKDCSNLL-------------------------TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp EECTTCTTCC-------------------------BCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred EECCCCCchh-------------------------hcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 7777666654 455566667777777777777777777777777777777777666
Q ss_pred CCCC
Q 037275 304 LGTG 307 (992)
Q Consensus 304 l~~~ 307 (992)
+..+
T Consensus 313 ~~~l 316 (328)
T 4fcg_A 313 QAQL 316 (328)
T ss_dssp SCC-
T ss_pred HHHH
Confidence 5443
No 282
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.8e-35 Score=338.96 Aligned_cols=257 Identities=22% Similarity=0.274 Sum_probs=182.9
Q ss_pred CCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCcceEEE
Q 037275 680 DFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGVDFQAI 758 (992)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 758 (992)
.|...++||+|+||+||.+.. .+|+.||||++... ..+.+.+|+.+++++ +||||+++++++ ......++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~~~~~~l 86 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSE-----TTDRFLYI 86 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCeEEE
Confidence 345568899999999987654 47999999998643 245678999999887 899999999985 34566799
Q ss_pred EEEeccCCCHHHHHhhcccchhh-cccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCC-----------
Q 037275 759 VYEYMQNGSLEDWLHQSEDQQEA-RSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQD----------- 826 (992)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----------- 826 (992)
||||+. |+|.+++......... ...++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999995 6999999865432111 1123445678999999999999999 99999999999999654
Q ss_pred --CcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC-------CCcCcccchhhHHHHHHHHHh-CCC
Q 037275 827 --LVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG-------GEASMTGDVYSFGILLLEMFT-RRR 896 (992)
Q Consensus 827 --~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlG~il~ellt-g~~ 896 (992)
+.+||+|||+|+......... ........||+.|+|||++.+ ..++.++|||||||++|||++ |+.
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~ 238 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSF----RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238 (434)
T ss_dssp CSCEEEECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCC
T ss_pred CceEEEEcccccceecCCCCccc----eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCC
Confidence 489999999999775432110 111234569999999999865 578999999999999999999 999
Q ss_pred CCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 037275 897 PTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVV 976 (992)
Q Consensus 897 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 976 (992)
||.+..... .. +.. ...... ............++.+++.+||+.||++|||+.||+
T Consensus 239 Pf~~~~~~~---~~------------i~~----~~~~~~-----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 294 (434)
T 2rio_A 239 PFGDKYSRE---SN------------IIR----GIFSLD-----EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 294 (434)
T ss_dssp TTCSTTTHH---HH------------HHH----TCCCCC-----CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCchhhH---HH------------Hhc----CCCCcc-----cccccccccchHHHHHHHHHHhhCChhhCCCHHHHH
Confidence 997532110 01 110 000000 001111234456789999999999999999999998
Q ss_pred H
Q 037275 977 A 977 (992)
Q Consensus 977 ~ 977 (992)
+
T Consensus 295 ~ 295 (434)
T 2rio_A 295 R 295 (434)
T ss_dssp T
T ss_pred h
Confidence 5
No 283
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5e-35 Score=331.78 Aligned_cols=174 Identities=22% Similarity=0.222 Sum_probs=115.8
Q ss_pred CCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhccccccccc
Q 037275 396 NLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDL 475 (992)
Q Consensus 396 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l 475 (992)
+|+.|++++|+++.. |.. ..++|+.|++++|.+++. ..+..+++|++| ++
T Consensus 206 ~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L-------------------------~L 255 (390)
T 3o6n_A 206 AVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEV-------------------------DL 255 (390)
T ss_dssp SCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEE-------------------------EC
T ss_pred cceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEE-------------------------EC
Confidence 444445555544422 211 124556666666666532 345555666555 34
Q ss_pred ccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCC
Q 037275 476 SYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQ 555 (992)
Q Consensus 476 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 555 (992)
++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++.
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 256 SYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp CSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee
Confidence 4444444556667777788888888888874 4556677788888888888887 5677788888888888988888854
Q ss_pred ChhhhhcCCCcceEecCCCcCcccCCCCCccCCcccccccCCCCcCCCCC
Q 037275 556 IPEYLENLSFLEYLNLSYNHFEGEVPTKGVFSNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 556 ~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N~~~C~~~~ 605 (992)
| +..+++|+.|++++|+|.|.+.. ..+..+....+.+++..|.++.
T Consensus 334 -~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 334 -K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp -C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTC
T ss_pred -C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecccc
Confidence 3 66788899999999999886543 3445566667788888887644
No 284
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3e-35 Score=317.15 Aligned_cols=232 Identities=13% Similarity=0.080 Sum_probs=182.0
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC---chhHHHHHHHHHHhccCCcceeEEEEeecccccCcce
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG---ASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|+.++++++||||+++++++.. .+.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-----RAG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-----CCc
Confidence 5799999999999999999999988999999999754332 23678999999999999999999999643 456
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
.++||||+++++|.++++.. ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred EEEEEEecCCCCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc
Confidence 79999999999999999542 34456888999999999999999 99999999999999999999998543
Q ss_pred cceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHH--HHHh
Q 037275 836 LAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLH--EFAR 913 (992)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~--~~~~ 913 (992)
|++ .++.++|||||||++|||++|+.||.+......... ....
T Consensus 175 ----------------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~ 219 (286)
T 3uqc_A 175 ----------------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTA 219 (286)
T ss_dssp ----------------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTT
T ss_pred ----------------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhc
Confidence 333 267899999999999999999999987543221100 0000
Q ss_pred hhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 037275 914 TALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVAKLCRARDTF 986 (992)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 986 (992)
...+ ..... ......++.+++.+||+.||++| |+.|+++.|+++....
T Consensus 220 ~~~~-~~~~~-----------------------~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 220 GQPI-EPADI-----------------------DRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp SCBC-CHHHH-----------------------CTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred cCCC-Chhhc-----------------------ccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0000 00000 01123458899999999999999 9999999999986543
No 285
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-35 Score=335.05 Aligned_cols=250 Identities=24% Similarity=0.326 Sum_probs=180.9
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCcceEE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.+|++.++||+|+||+||.... .+++.||||++.... ...+.+|+.+++.+ +||||+++++++. +....+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~-----~~~~~~ 94 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEK-----DRQFQY 94 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEE-----ETTEEE
T ss_pred EEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEe-----cCCEEE
Confidence 4688889999999998654333 378999999985432 23456899999999 7999999999854 445679
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC-----CCcEEEe
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ-----DLVAHLG 832 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~ 832 (992)
+||||+. |+|.+++..... ...+..++.++.||+.||+|||++ +|+||||||+||+++. ...+||+
T Consensus 95 lv~E~~~-g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~ 165 (432)
T 3p23_A 95 IAIELCA-ATLQEYVEQKDF-----AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMIS 165 (432)
T ss_dssp EEEECCS-EEHHHHHHSSSC-----CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEEC
T ss_pred EEEECCC-CCHHHHHHhcCC-----CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEe
Confidence 9999996 599999986543 244455678999999999999999 9999999999999953 2368899
Q ss_pred ecccceecCCCCCCCCcccCCCCCccccccccccccccc---CCCcCcccchhhHHHHHHHHHh-CCCCCCCCccCCccH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGM---GGEASMTGDVYSFGILLLEMFT-RRRPTDGMFNQGLTL 908 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~ 908 (992)
|||+|+....... .........||+.|+|||++. ...++.++||||+||++|||++ |..||...... .
T Consensus 166 DFG~a~~~~~~~~-----~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---~ 237 (432)
T 3p23_A 166 DFGLCKKLAVGRH-----SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---Q 237 (432)
T ss_dssp CTTEEECC-----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---H
T ss_pred cccceeeccCCCc-----ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---H
Confidence 9999987653211 112233456999999999987 4567889999999999999999 99998542111 0
Q ss_pred HHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 909 HEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
.... . ... .... ..........+.+++.+||+.||++|||++||++
T Consensus 238 ~~~~-----------~-----~~~----~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 238 ANIL-----------L-----GAC----SLDC---LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHH-----------T-----TCC----CCTT---SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHH-----------h-----ccC----Cccc---cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0000 0 000 0000 0011123445789999999999999999999984
No 286
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.7e-35 Score=331.32 Aligned_cols=251 Identities=18% Similarity=0.186 Sum_probs=182.9
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC---CchhHHHHHHHHHHhccC-Ccc---------ee----
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK---GASNGFVAECQALRNIRH-RNL---------IK---- 740 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~ni---------v~---- 740 (992)
...|...++||+|+||+||+|++..+|+.||||+++.... ...+.+.+|+.+++.++| ++. +.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3457778899999999999999998999999999873322 235778999999999976 211 11
Q ss_pred --------EEEEeecccccCcceEEEEEEeccCCCHHHHHhhccc-chhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 037275 741 --------IITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSED-QQEARSLTLIQRINIIIDVASAIEYIHHHCQPPV 811 (992)
Q Consensus 741 --------~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~i 811 (992)
+..++...........+++|+++ +++|.+++..... ......+++..++.++.|++.||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 11111110011123457777766 6799999963321 11123588899999999999999999999 99
Q ss_pred EeccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccc----------cCCCcCcccch
Q 037275 812 VHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYG----------MGGEASMTGDV 881 (992)
Q Consensus 812 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Di 881 (992)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dv 300 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDT 300 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----------cccCCC-CceeCchhhhccccccccccCcCCCchhhH
Confidence 99999999999999999999999999865421 223457 999999998 55678899999
Q ss_pred hhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhc
Q 037275 882 YSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVC 961 (992)
Q Consensus 882 wSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 961 (992)
|||||++|||++|+.||......... ..... .+. ....++.+++.+|
T Consensus 301 wSlGvil~elltg~~Pf~~~~~~~~~-----------------~~~~~---------~~~-------~~~~~~~~li~~~ 347 (413)
T 3dzo_A 301 WTLGLAIYWIWCADLPNTDDAALGGS-----------------EWIFR---------SCK-------NIPQPVRALLEGF 347 (413)
T ss_dssp HHHHHHHHHHHHSSCCCCTTGGGSCS-----------------GGGGS---------SCC-------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCcchhhhH-----------------HHHHh---------hcc-------cCCHHHHHHHHHH
Confidence 99999999999999999764322110 00000 000 0124588999999
Q ss_pred cCCCCCCCCCHHHHHH
Q 037275 962 SMESPTERMEMRDVVA 977 (992)
Q Consensus 962 l~~dP~~RPs~~evl~ 977 (992)
|+.||++|||+.|+++
T Consensus 348 l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 348 LRYPKEDRLLPLQAME 363 (413)
T ss_dssp TCSSGGGSCCHHHHTT
T ss_pred ccCChhhCcCHHHHHh
Confidence 9999999999988854
No 287
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-34 Score=317.60 Aligned_cols=256 Identities=30% Similarity=0.514 Sum_probs=228.7
Q ss_pred cceeEEeeCCcccc--ccCCCccCCCcccEEEccC-CcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCce
Q 037275 348 TMTDIVIAGNQISG--IIPTGIRNLVNLVELCMDD-NKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNL 424 (992)
Q Consensus 348 ~L~~L~l~~n~i~~--~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 424 (992)
+++.|++++|++++ .+|..|.++++|++|+|++ |.+.+.+|..|..+++|++|+|++|++++.+|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 57778888888887 7788888888888888884 88888888888888888888888888888888888888888888
Q ss_pred eccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccc
Q 037275 425 ALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRF 504 (992)
Q Consensus 425 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 504 (992)
+|++|.+++.+|..|..+++|++|++++|++++.+|..+......++.|++++|.+++..|..+..++ |++|+|++|++
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 88888888888888888888888888888888888888877776777889999999999999999997 99999999999
Q ss_pred cccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCC
Q 037275 505 SGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKG 584 (992)
Q Consensus 505 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 584 (992)
++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.+|..+..+++|++|++++|++++.+|...
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 999999999999999999999999976665 8899999999999999999999999999999999999999999999888
Q ss_pred ccCCcccccccCCCCcCCCCC
Q 037275 585 VFSNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 585 ~~~~~~~~~l~~N~~~C~~~~ 605 (992)
.++.++.+++.+|++.|+.|.
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTS
T ss_pred cccccChHHhcCCCCccCCCC
Confidence 899999999999999999866
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-34 Score=351.79 Aligned_cols=248 Identities=24% Similarity=0.347 Sum_probs=196.7
Q ss_pred cCCCCCCccccccceEEEEeEECC-CCeEEEEEEeeccCC-CchhHHHHHHHHHHhccCCcceeEEEEeecccccCcceE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGE-NGMMVAVKVINLKQK-GASNGFVAECQALRNIRHRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 756 (992)
++|++.++||+|+||+||+|.+.. +++.||||++..... .....+.+|+.++++++||||+++++++...+..+....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 689999999999999999999965 689999999864322 334568899999999999999999999876544334446
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeeccc
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGL 836 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 836 (992)
++||||+++++|.+++.. .+++.+++.++.||+.||+|||++ +|+||||||+||+++.+ .+||+|||+
T Consensus 160 ~lv~E~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEECCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 999999999999987753 489999999999999999999999 99999999999999875 999999999
Q ss_pred ceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHHhhhC
Q 037275 837 AKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFARTAL 916 (992)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 916 (992)
++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|.+||.+......
T Consensus 228 a~~~~~~------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---------- 284 (681)
T 2pzi_A 228 VSRINSF------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL---------- 284 (681)
T ss_dssp CEETTCC------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------
T ss_pred chhcccC------------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc----------
Confidence 9875432 234689999999988765 48899999999999999999998875322211
Q ss_pred ChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHhh
Q 037275 917 PDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERM-EMRDVVAKLCRARDTF 986 (992)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 986 (992)
+... ........+.+++.+||+.||++|| +++++.+.|..+.+..
T Consensus 285 ~~~~-------------------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 285 PEDD-------------------------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp CTTC-------------------------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred cccc-------------------------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0000 0011124578999999999999999 5666777777665443
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.2e-34 Score=311.45 Aligned_cols=236 Identities=20% Similarity=0.287 Sum_probs=180.5
Q ss_pred hcCCCCC-CccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHH-HhccCCcceeEEEEeecccccCcce
Q 037275 678 TNDFSSS-NMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQAL-RNIRHRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 678 ~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 755 (992)
.++|.+. ++||+|+||.||+|.+..+++.||+|+++. ...+.+|+.++ +..+||||+++++++... ..+...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCce
Confidence 3567776 789999999999999998999999999852 34577899888 556999999999987542 234567
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCC---CCcEEEe
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQ---DLVAHLG 832 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 832 (992)
.++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred EEEEEeecCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 7999999999999999987542 2589999999999999999999999 9999999999999998 7899999
Q ss_pred ecccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCCCCCCccCCccHHHHH
Q 037275 833 DFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRPTDGMFNQGLTLHEFA 912 (992)
Q Consensus 833 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~~~~ 912 (992)
|||++.... +..++.++||||+||++|||++|+.||.+........ ..
T Consensus 163 Dfg~a~~~~------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~--~~ 210 (299)
T 3m2w_A 163 DFGFAKETT------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GM 210 (299)
T ss_dssp CCTTCEECT------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C--CS
T ss_pred ccccccccc------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH--HH
Confidence 999987432 2346779999999999999999999997632211000 00
Q ss_pred hhhCChhHHHHHHhhHhHhhhccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 037275 913 RTALPDKVMEIVDSVLLLEVQASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVVA 977 (992)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 977 (992)
...... . ..............++.+++.+||+.||++|||++|+++
T Consensus 211 ~~~~~~-----------~--------~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 211 KTRIRM-----------G--------QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CCSSCT-----------T--------CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhh-----------c--------cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000 0 000000000112456889999999999999999999986
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.6e-32 Score=306.03 Aligned_cols=307 Identities=25% Similarity=0.409 Sum_probs=182.6
Q ss_pred cccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCcccccccccc
Q 037275 167 IGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKL 246 (992)
Q Consensus 167 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L 246 (992)
+..+++|++|++++|.+. .++ .+..+++|++|++++|++++ ++. +..+++|++|++++|.+++
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~------------- 102 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD------------- 102 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-------------
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-------------
Confidence 345556666666666653 233 25556666666666666653 232 5666666666666665541
Q ss_pred chhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceE
Q 037275 247 LGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTA 326 (992)
Q Consensus 247 ~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~ 326 (992)
+| .+..+++|++|++++|++++..+ +..+++|++|++++|..... +..+..+++|+.
T Consensus 103 -------------~~-~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-------~~~~~~l~~L~~ 159 (347)
T 4fmz_A 103 -------------IS-ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-------LSPLSNMTGLNY 159 (347)
T ss_dssp -------------CG-GGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-------CGGGTTCTTCCE
T ss_pred -------------ch-HHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccc-------ccchhhCCCCcE
Confidence 11 34455556666666666554333 55566666666666533221 112344444444
Q ss_pred eecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCcc
Q 037275 327 IGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNF 406 (992)
Q Consensus 327 L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 406 (992)
|++++|.+.+. .+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|+
T Consensus 160 L~l~~~~~~~~-------------------------~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~ 210 (347)
T 4fmz_A 160 LTVTESKVKDV-------------------------TP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQ 210 (347)
T ss_dssp EECCSSCCCCC-------------------------GG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred EEecCCCcCCc-------------------------hh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCC
Confidence 44444443321 11 4455566666666666653322 5566666666666666
Q ss_pred ccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccc
Q 037275 407 LAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPL 486 (992)
Q Consensus 407 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~ 486 (992)
+++..+ +..+++|++|++++|++++..+ +..+++|++|++++|.++ + + .
T Consensus 211 l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~-------------------------~-~-~ 259 (347)
T 4fmz_A 211 ITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQIS-------------------------D-I-N 259 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-------------------------C-C-G
T ss_pred CCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccC-------------------------C-C-h
Confidence 664333 5566666666666666664322 566666666644444443 1 1 2
Q ss_pred cccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCc
Q 037275 487 EVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFL 566 (992)
Q Consensus 487 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 566 (992)
.+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+..+++|++|+|++|++++..| +..+++|
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 335 (347)
T 4fmz_A 260 AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKM 335 (347)
T ss_dssp GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTC
T ss_pred hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhcc
Confidence 456677788888888888753 357778888888888888887777778888888888888888886555 7778888
Q ss_pred ceEecCCCcCc
Q 037275 567 EYLNLSYNHFE 577 (992)
Q Consensus 567 ~~L~l~~N~l~ 577 (992)
++|++++|+++
T Consensus 336 ~~L~l~~N~i~ 346 (347)
T 4fmz_A 336 DSADFANQVIK 346 (347)
T ss_dssp SEESSSCC---
T ss_pred ceeehhhhccc
Confidence 88888888775
No 291
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.6e-33 Score=331.69 Aligned_cols=334 Identities=18% Similarity=0.182 Sum_probs=194.8
Q ss_pred ccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCC
Q 037275 243 LPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCT 322 (992)
Q Consensus 243 ~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~ 322 (992)
+.+++.+.+.+|.+....+..+..+++|++|+|++|.+++.++..|..+++|++|+|++|.++.+++. .+.+++
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~------~~~~l~ 123 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH------VFQNVP 123 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT------TTTTCT
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH------HHcCCC
Confidence 45666777777777766555667777777777777777777777777777777777777777765543 345666
Q ss_pred cceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEec
Q 037275 323 ELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYL 402 (992)
Q Consensus 323 ~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 402 (992)
+|+.|+|++|.+.+..+..+..+. +|++|+|++|.+++..|..|..+++|++|+|++|.+++.. +..+++|+.|++
T Consensus 124 ~L~~L~L~~n~l~~l~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l 199 (597)
T 3oja_B 124 LLTVLVLERNDLSSLPRGIFHNTP-KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANV 199 (597)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEEC
T ss_pred CCCEEEeeCCCCCCCCHHHhccCC-CCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhc
Confidence 777777777777654444444443 4666777777766666666666667777777777666432 344566666677
Q ss_pred cCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccC
Q 037275 403 DSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSG 482 (992)
Q Consensus 403 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~ 482 (992)
++|.+++. ...++|+.|++++|.++.. +..+ .++|+.|++++|.+++. ..+...+.+..|+|++|.+++
T Consensus 200 ~~n~l~~l-----~~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~~---~~l~~l~~L~~L~Ls~N~l~~ 268 (597)
T 3oja_B 200 SYNLLSTL-----AIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT---AWLLNYPGLVEVDLSYNELEK 268 (597)
T ss_dssp CSSCCSEE-----ECCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCE
T ss_pred ccCccccc-----cCCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCCC---hhhccCCCCCEEECCCCccCC
Confidence 66666532 1223566666666666632 2222 24566666666666532 223333444455555555555
Q ss_pred cccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhc
Q 037275 483 TLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLEN 562 (992)
Q Consensus 483 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 562 (992)
..|..|+.+++|++|+|++|.+++ +|..+..+++|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|++. | +..
T Consensus 269 ~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~ 343 (597)
T 3oja_B 269 IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LST 343 (597)
T ss_dssp EESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCT
T ss_pred CCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhh
Confidence 555555555555555555555553 3444445555555555555555 3455555555555555555555533 1 344
Q ss_pred CCCcceEecCCCcCcccCCCCCccCCcccccccCCCCcCCC
Q 037275 563 LSFLEYLNLSYNHFEGEVPTKGVFSNKTGISLSGNGKVCGG 603 (992)
Q Consensus 563 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N~~~C~~ 603 (992)
+++|+.|++++|+|.|.+.. ..+..+....+.+++..|+.
T Consensus 344 ~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 344 HHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp TCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCT
T ss_pred cCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCc
Confidence 45555555555555554322 12333333444555555554
No 292
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.4e-32 Score=304.74 Aligned_cols=306 Identities=24% Similarity=0.371 Sum_probs=166.0
Q ss_pred CCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccccccc
Q 037275 70 VGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKL 149 (992)
Q Consensus 70 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L 149 (992)
+..+++|++|++++|.+. .+|. +..+++|++|+|++|+++ .+|. +..+++|++|++++|.++ .+|. +..+++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~-~~~~--~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKIT-DISA--LQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCC-CCGG--GTTCTTC
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCccc-CchH--HcCCCcC
Confidence 346677777777777776 4554 777777777877777777 4444 777777777777777776 3432 3356677
Q ss_pred ccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCC
Q 037275 150 ENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTN 229 (992)
Q Consensus 150 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N 229 (992)
++|++++|.+++. |. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|
T Consensus 113 ~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 7777777777643 33 6677777777777775534333 36777777777777777764322 666777777777777
Q ss_pred ccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCC
Q 037275 230 RFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEA 309 (992)
Q Consensus 230 ~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 309 (992)
.+.+ + +. +..+++|++|++++|.+++..+ +..+++|++|++++|+++.++.
T Consensus 188 ~l~~-~-------------------------~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~ 238 (347)
T 4fmz_A 188 QIED-I-------------------------SP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP 238 (347)
T ss_dssp CCCC-C-------------------------GG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred cccc-c-------------------------cc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc
Confidence 6652 1 11 4445555555555555554333 4555555555555555544221
Q ss_pred CCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCc
Q 037275 310 NDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPH 389 (992)
Q Consensus 310 ~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 389 (992)
+..+++|+.|++++|.+.+. ..+..+ ++|++|++++|++++. ..+..+++|++|++++|++++..+.
T Consensus 239 --------~~~l~~L~~L~l~~n~l~~~--~~~~~l-~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~ 305 (347)
T 4fmz_A 239 --------LANLSQLTWLEIGTNQISDI--NAVKDL-TKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDME 305 (347)
T ss_dssp --------GTTCTTCCEEECCSSCCCCC--GGGTTC-TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHH
T ss_pred --------hhcCCCCCEEECCCCccCCC--hhHhcC-CCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChh
Confidence 33444444444444444421 111111 1233333333333322 1234444444444444444444444
Q ss_pred cccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcc
Q 037275 390 AIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDL 431 (992)
Q Consensus 390 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 431 (992)
.+..+++|+.|++++|++++..| +..+++|+.|++++|+|
T Consensus 306 ~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 306 VIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp HHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred HhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 44444444444444444443333 44444444444444444
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.3e-33 Score=308.94 Aligned_cols=247 Identities=16% Similarity=0.155 Sum_probs=185.6
Q ss_pred hcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--------CchhHHHHHHHHHHhcc---------CCccee
Q 037275 678 TNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--------GASNGFVAECQALRNIR---------HRNLIK 740 (992)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------h~niv~ 740 (992)
.++|++.++||+|+||+||+|++ +|+.||||+++.... ...+.+.+|+.+++.++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 45789999999999999999998 689999999975432 23377899999999986 888888
Q ss_pred EEEEeeccc-------------------------ccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHH
Q 037275 741 IITICSSID-------------------------FKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIID 795 (992)
Q Consensus 741 ~~~~~~~~~-------------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~q 795 (992)
+.+++.... +.+....++||||+++|++.+.+.+ ..+++..++.++.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-------~~~~~~~~~~i~~q 169 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-------KLSSLATAKSILHQ 169 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-------TCCCHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-------cCCCHHHHHHHHHH
Confidence 877643110 1135778999999999977666643 24799999999999
Q ss_pred HHHHHHHHH-hcCCCCeEeccCCCCCeeeCCCC--------------------cEEEeecccceecCCCCCCCCcccCCC
Q 037275 796 VASAIEYIH-HHCQPPVVHGDLKPSNVLLDQDL--------------------VAHLGDFGLAKFLSSSPLDTAVETPSS 854 (992)
Q Consensus 796 i~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 854 (992)
|+.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 170 i~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----------- 235 (336)
T 2vuw_A 170 LTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----------- 235 (336)
T ss_dssp HHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----------
T ss_pred HHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----------
Confidence 999999999 89 999999999999999887 9999999999876431
Q ss_pred CCcccccccccccccccCCCcCcccchhhHHHH-HHHHHhCCCCCCCCccCCccHHHHHhhhCChhHHHHHHhhHhHhhh
Q 037275 855 SKGIKGTVGYIAPEYGMGGEASMTGDVYSFGIL-LLEMFTRRRPTDGMFNQGLTLHEFARTALPDKVMEIVDSVLLLEVQ 933 (992)
Q Consensus 855 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (992)
...||+.|+|||++.+.. +.++||||+|++ .+++++|..||... .|. ....+..... .
T Consensus 236 --~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~--------~~~~~~~~~~-~- 294 (336)
T 2vuw_A 236 --IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWL--------HYLTDKMLKQ-M- 294 (336)
T ss_dssp --EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHH--------HHHHHHHHHT-C-
T ss_pred --cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhh--------hHHHHhhhhh-h-
Confidence 236899999999988766 889999998777 77888899987431 000 0011111100 0
Q ss_pred ccCCCCCCccccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 037275 934 ASNSRSCGDERLRTEERLVAVVETGVVCSMESPTERMEMRDVV 976 (992)
Q Consensus 934 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 976 (992)
................++.+++.+||+.| ||+|++
T Consensus 295 ---~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 295 ---TFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp ---CCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred ---ccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 00000111122345678999999999976 999987
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=6.2e-32 Score=298.93 Aligned_cols=290 Identities=23% Similarity=0.319 Sum_probs=143.8
Q ss_pred ccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEecc
Q 037275 148 KLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLP 227 (992)
Q Consensus 148 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~ 227 (992)
+++.++++++.++ .+|..+. ++|++|++++|.+.+..|..|.++++|++|+|++|++++..|..|.++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3445555555554 4444442 455666666666654445556666666666666666665555556666666666666
Q ss_pred CCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCC
Q 037275 228 TNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTG 307 (992)
Q Consensus 228 ~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 307 (992)
+|+++ .+| ..+. ++|++|++++|++++..+..|..+++|++|++++|.++..
T Consensus 111 ~n~l~-~l~-------------------------~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 162 (332)
T 2ft3_A 111 KNHLV-EIP-------------------------PNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENS 162 (332)
T ss_dssp SSCCC-SCC-------------------------SSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGG
T ss_pred CCcCC-ccC-------------------------cccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccC
Confidence 66554 222 1111 3555555555555544444455555555555555544220
Q ss_pred CCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCC
Q 037275 308 EANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTI 387 (992)
Q Consensus 308 ~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 387 (992)
+..+..+..+ +|++|++++|++++ +
T Consensus 163 -----------------------------------------------------~~~~~~~~~l-~L~~L~l~~n~l~~-l 187 (332)
T 2ft3_A 163 -----------------------------------------------------GFEPGAFDGL-KLNYLRISEAKLTG-I 187 (332)
T ss_dssp -----------------------------------------------------GSCTTSSCSC-CCSCCBCCSSBCSS-C
T ss_pred -----------------------------------------------------CCCcccccCC-ccCEEECcCCCCCc-c
Confidence 0122233333 44455555555442 2
Q ss_pred CccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhc
Q 037275 388 PHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSIS 467 (992)
Q Consensus 388 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~ 467 (992)
|..+. ++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..
T Consensus 188 ~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~----------------------------- 236 (332)
T 2ft3_A 188 PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS----------------------------- 236 (332)
T ss_dssp CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTG-----------------------------
T ss_pred Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhH-----------------------------
Confidence 22221 34444444444444433344444444444444444444333333
Q ss_pred ccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccc------cCC
Q 037275 468 TLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSS------LKS 541 (992)
Q Consensus 468 ~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~ 541 (992)
+..+++|++|+|++|+++ .+|..+..+++|+.|++++|+|++..+..|.. .++
T Consensus 237 --------------------~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 295 (332)
T 2ft3_A 237 --------------------LSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAY 295 (332)
T ss_dssp --------------------GGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCC
T ss_pred --------------------hhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccccccccc
Confidence 344444555555555554 34444555555555555555555444444433 245
Q ss_pred CCEEECCCcccC--CCChhhhhcCCCcceEecCCCc
Q 037275 542 IKELDMSSNNLS--GQIPEYLENLSFLEYLNLSYNH 575 (992)
Q Consensus 542 L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~l~~N~ 575 (992)
|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 296 l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 296 YNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 666666666665 4556666666667777766663
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2.3e-31 Score=294.21 Aligned_cols=125 Identities=25% Similarity=0.375 Sum_probs=67.7
Q ss_pred cccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccC
Q 037275 149 LENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPT 228 (992)
Q Consensus 149 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~ 228 (992)
+++++++++.++ .+|..+. ++|++|++++|.+.+..+..|.++++|++|+|++|++++..|..|..+++|++|++++
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 444444444444 3444332 3555666666666544444566666666666666666655566666666666666666
Q ss_pred CccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCC
Q 037275 229 NRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNL 304 (992)
Q Consensus 229 N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 304 (992)
|+++ .+|. .+. ++|++|++++|++++..+..|..+++|++|++++|.+
T Consensus 110 n~l~-~l~~-------------------------~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 157 (330)
T 1xku_A 110 NQLK-ELPE-------------------------KMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157 (330)
T ss_dssp SCCS-BCCS-------------------------SCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCC
T ss_pred CcCC-ccCh-------------------------hhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcC
Confidence 6555 2222 111 3555555555555555555555555555555555554
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=4.3e-31 Score=292.21 Aligned_cols=292 Identities=23% Similarity=0.234 Sum_probs=181.4
Q ss_pred EEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccc
Q 037275 53 TKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRN 132 (992)
Q Consensus 53 ~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n 132 (992)
+.++++++.+ ..+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..++.+++|++|++++|
T Consensus 36 ~~l~~~~~~l-~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 36 RVVQCSDLGL-KAVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp TEEECCSSCC-SSCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred CEEECCCCCc-cccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 4456666666 35666553 57788888888887655667888888888888888887666777777888888888877
Q ss_pred cccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCccc--CCcCCccCCCCcccEEeccCcccccc
Q 037275 133 NLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLW--GRIPNNLGNLRNLILLNLGENRFSGI 210 (992)
Q Consensus 133 ~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~--~~~~~~l~~l~~L~~L~L~~n~l~~~ 210 (992)
+++ .+|..++ ++|++|++++|.+++..+..|.++++|++|++++|.+. +..|..+..+ +|+.|++++|++++
T Consensus 113 ~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 113 HLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp CCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred cCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 777 6666554 56667777777766544445666666666666666663 2455555555 66666666666663
Q ss_pred cCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccc
Q 037275 211 VPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRS 290 (992)
Q Consensus 211 ~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 290 (992)
+|..+. ++|++|++++|+++ +..+..+..+++|++|++++|++++..+..|..
T Consensus 187 l~~~~~--~~L~~L~l~~n~i~-------------------------~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 239 (332)
T 2ft3_A 187 IPKDLP--ETLNELHLDHNKIQ-------------------------AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSF 239 (332)
T ss_dssp CCSSSC--SSCSCCBCCSSCCC-------------------------CCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGG
T ss_pred cCcccc--CCCCEEECCCCcCC-------------------------ccCHHHhcCCCCCCEEECCCCcCCcCChhHhhC
Confidence 444333 45555555555544 444555666666777777777776666666666
Q ss_pred cCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCC
Q 037275 291 LKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNL 370 (992)
Q Consensus 291 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l 370 (992)
+++|++|+|++|+++.++. .+..+++|+.|++++|++++..+..+..... -...
T Consensus 240 l~~L~~L~L~~N~l~~lp~-------~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~-------------------~~~~ 293 (332)
T 2ft3_A 240 LPTLRELHLDNNKLSRVPA-------GLPDLKLLQVVYLHTNNITKVGVNDFCPVGF-------------------GVKR 293 (332)
T ss_dssp CTTCCEEECCSSCCCBCCT-------TGGGCTTCCEEECCSSCCCBCCTTSSSCSSC-------------------CSSS
T ss_pred CCCCCEEECCCCcCeecCh-------hhhcCccCCEEECCCCCCCccChhHcccccc-------------------cccc
Confidence 6777777777776665443 2444555555555555555443333332110 0113
Q ss_pred CcccEEEccCCcCC--CCCCccccCCCCCcEEeccCcc
Q 037275 371 VNLVELCMDDNKLT--GTIPHAIGELKNLQLLYLDSNF 406 (992)
Q Consensus 371 ~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~ 406 (992)
.+|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 294 ~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 294 AYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 45677777777765 4566677777777777777764
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=8.4e-31 Score=289.69 Aligned_cols=193 Identities=21% Similarity=0.299 Sum_probs=114.3
Q ss_pred eeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccc
Q 037275 55 LDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNL 134 (992)
Q Consensus 55 ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l 134 (992)
++++++.+ ..+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|++++..|..++.+++|++|++++|++
T Consensus 36 l~~~~~~l-~~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (330)
T 1xku_A 36 VQCSDLGL-EKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL 112 (330)
T ss_dssp EECTTSCC-CSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCC
T ss_pred EEecCCCc-cccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcC
Confidence 44444444 34555443 5777888888888755555777788888888888888766677777777777777777776
Q ss_pred cccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCccccc--ccC
Q 037275 135 VGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSG--IVP 212 (992)
Q Consensus 135 ~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~--~~p 212 (992)
+ .+|..++ ++|++|++++|.+.+..+..|.++++|++|++++|+++. ..+
T Consensus 113 ~-~l~~~~~---------------------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 164 (330)
T 1xku_A 113 K-ELPEKMP---------------------------KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIEN 164 (330)
T ss_dssp S-BCCSSCC---------------------------TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCT
T ss_pred C-ccChhhc---------------------------ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcCh
Confidence 6 4444332 345555555555544444445555556666666665542 445
Q ss_pred ccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccC
Q 037275 213 PSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLK 292 (992)
Q Consensus 213 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 292 (992)
..+..+++|++|++++|+++ .+|. .+. ++|++|++++|++++..+..|..++
T Consensus 165 ~~~~~l~~L~~L~l~~n~l~-~l~~-------------------------~~~--~~L~~L~l~~n~l~~~~~~~~~~l~ 216 (330)
T 1xku_A 165 GAFQGMKKLSYIRIADTNIT-TIPQ-------------------------GLP--PSLTELHLDGNKITKVDAASLKGLN 216 (330)
T ss_dssp TGGGGCTTCCEEECCSSCCC-SCCS-------------------------SCC--TTCSEEECTTSCCCEECTGGGTTCT
T ss_pred hhccCCCCcCEEECCCCccc-cCCc-------------------------ccc--ccCCEEECCCCcCCccCHHHhcCCC
Confidence 55666666666666666655 1221 111 4556666666666655555555555
Q ss_pred ccceEecCCCCCCC
Q 037275 293 NLEWLNLGSNNLGT 306 (992)
Q Consensus 293 ~L~~L~L~~N~l~~ 306 (992)
+|++|+|++|.++.
T Consensus 217 ~L~~L~Ls~n~l~~ 230 (330)
T 1xku_A 217 NLAKLGLSFNSISA 230 (330)
T ss_dssp TCCEEECCSSCCCE
T ss_pred CCCEEECCCCcCce
Confidence 55555555555443
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=4.6e-35 Score=340.53 Aligned_cols=358 Identities=16% Similarity=0.148 Sum_probs=247.3
Q ss_pred CcCCeeeccCCCCCccCCcc-ccCCCCCCEEEeecccCCC----CCCcccccCCCCcEeecccccccccCChhhccccc-
Q 037275 74 SFLRYLNLADNNFHGEIPHQ-IGRLVRLEALVLANNSFSG----KIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWL- 147 (992)
Q Consensus 74 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~- 147 (992)
++|++|||++|+++...... +..+++|++|+|++|++++ .+|..+..+++|++|++++|.+.+..+..++..+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45677777777776433222 5667777777777777763 34556666777777777777776555555555555
Q ss_pred ---ccccccccccccCC----CCCCccccccccceEEecCCcccCCcCCcc-----CCCCcccEEeccCcccccc----c
Q 037275 148 ---KLENLTIADNHLTG----HFPASIGNLSTLERINVLGNGLWGRIPNNL-----GNLRNLILLNLGENRFSGI----V 211 (992)
Q Consensus 148 ---~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l-----~~l~~L~~L~L~~n~l~~~----~ 211 (992)
+|++|+|++|.++. .+|..+..+++|++|++++|.+.+..+..+ ...++|++|+|++|++++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57888888887773 457777788888888888888754333332 2245788888888888753 3
Q ss_pred CccccccCCCcEEeccCCccCCCCCccccc----cccccchhhccccccCCC----CchhhhccccCceeeecccccccc
Q 037275 212 PPSIFNISSLENVFLPTNRFNGSLPLDIGV----SLPKLLGFIVAENNFAGS----IPESLSNASNLVELTLFDNQFRGK 283 (992)
Q Consensus 212 p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~----~~~~L~~l~l~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~ 283 (992)
+..+..+++|++|++++|.+.+..+..+.. ..++|+.|++++|++++. ++..+..+++|++|++++|++++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 555666788888888888876433322222 244788888888887764 577788889999999999998865
Q ss_pred cc-----ccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccc----cccceeEEe
Q 037275 284 VS-----IYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANL----SSTMTDIVI 354 (992)
Q Consensus 284 ~~-----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l----~~~L~~L~l 354 (992)
.. ..+..+++|++|+|++|.++..+.. .....+..+++|+.|++++|.+.+..+..+... ..+|++|++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCG--DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH--HHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHH--HHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 43 2333578999999999988753221 123456678889999999998876555444432 246888888
Q ss_pred eCCccccc----cCCCccCCCcccEEEccCCcCCCCCCccccC-----CCCCcEEeccCccccc----cCCCCCCCcccc
Q 037275 355 AGNQISGI----IPTGIRNLVNLVELCMDDNKLTGTIPHAIGE-----LKNLQLLYLDSNFLAG----GIPTSLGNLTLL 421 (992)
Q Consensus 355 ~~n~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L 421 (992)
++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|++++ .+|..+..+++|
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L 400 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 400 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc
Confidence 88888765 4555666788888888888877544444432 5678888888888875 566667777888
Q ss_pred CceeccCCcccC
Q 037275 422 TNLALSSNDLQG 433 (992)
Q Consensus 422 ~~L~L~~N~l~~ 433 (992)
++|++++|++++
T Consensus 401 ~~L~l~~N~i~~ 412 (461)
T 1z7x_W 401 RELDLSNNCLGD 412 (461)
T ss_dssp CEEECCSSSCCH
T ss_pred cEEECCCCCCCH
Confidence 888888888774
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.5e-34 Score=336.32 Aligned_cols=365 Identities=20% Similarity=0.191 Sum_probs=202.1
Q ss_pred cccccccccccccCCCCCCc-cccccccceEEecCCcccC----CcCCccCCCCcccEEeccCcccccccCcccc-ccC-
Q 037275 147 LKLENLTIADNHLTGHFPAS-IGNLSTLERINVLGNGLWG----RIPNNLGNLRNLILLNLGENRFSGIVPPSIF-NIS- 219 (992)
Q Consensus 147 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~- 219 (992)
++|++|+|++|.++...... +..+++|++|++++|.+.. .++..+..+++|++|+|++|++++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46778888888877543332 6677788888888887743 3456667777788888888877654343333 233
Q ss_pred ---CCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccc-----c
Q 037275 220 ---SLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRS-----L 291 (992)
Q Consensus 220 ---~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-----l 291 (992)
+|++|++++|+++..-. ..++..+..+++|++|+|++|.+++..+..+.. .
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~---------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 141 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGC---------------------GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ 141 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGH---------------------HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTT
T ss_pred CCCceeEEEccCCCCCHHHH---------------------HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCC
Confidence 57777777776652100 134667777888888888888887555544332 4
Q ss_pred CccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCC
Q 037275 292 KNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLV 371 (992)
Q Consensus 292 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~ 371 (992)
++|++|+|++|+++..... .....+..+++|+.|++++|.+.+..+..+..... ...+
T Consensus 142 ~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~--------------------~~~~ 199 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCE--PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK--------------------DSPC 199 (461)
T ss_dssp CCCCEEECTTSCCBGGGHH--HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHH--------------------HSCC
T ss_pred CcceEEECCCCCCCHHHHH--HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHh--------------------cCCC
Confidence 5688888888877653321 12234555667777777777665443332221100 0133
Q ss_pred cccEEEccCCcCCCC----CCccccCCCCCcEEeccCccccccC-----CCCCCCccccCceeccCCcccCC----CCCC
Q 037275 372 NLVELCMDDNKLTGT----IPHAIGELKNLQLLYLDSNFLAGGI-----PTSLGNLTLLTNLALSSNDLQGS----IPPS 438 (992)
Q Consensus 372 ~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~ 438 (992)
+|++|++++|.+++. ++..+..+++|+.|++++|++++.. +..+..+++|+.|++++|.++.. ++..
T Consensus 200 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 279 (461)
T 1z7x_W 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279 (461)
T ss_dssp CCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred CceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH
Confidence 555555555555532 3444555556666666666554321 12222355666666666666532 3444
Q ss_pred ccccccccccccccccccccCchhhhhh----cccccccccccccccCc----ccccccCCCCccEEeeecccccccCCc
Q 037275 439 LGNCKNLIELHMADIELTGALPPQILSI----STLSLSLDLSYNLLSGT----LPLEVGNLKNLVYFNISVNRFSGEIPV 510 (992)
Q Consensus 439 ~~~l~~L~~L~l~~n~l~~~~p~~~~~~----~~~~~~L~l~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 510 (992)
+..+++|++|++++|.++...+..+... ...++.|++++|.+++. ++..+..+++|++|+|++|++++..+.
T Consensus 280 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 5555666666666655543222222211 11333344444444432 334445556666666666666544333
Q ss_pred cccc-----ccccceeeccCCcccc----cCCccccccCCCCEEECCCcccCC
Q 037275 511 TLSA-----CTSLQQLYLQGNSFSG----SIPSSLSSLKSIKELDMSSNNLSG 554 (992)
Q Consensus 511 ~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~ 554 (992)
.+.. .++|++|+|++|++++ .+|..+..+++|++|+|++|++++
T Consensus 360 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 360 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 3332 3456666666666654 455555555666666666666553
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=283.40 Aligned_cols=288 Identities=17% Similarity=0.192 Sum_probs=223.8
Q ss_pred CCCcCCCCCCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecc
Q 037275 29 SSWNNSTNLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANN 108 (992)
Q Consensus 29 ~~w~~~~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n 108 (992)
+.|.....+|.|.|+ |+ .+++.+ ..+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 21 ~~~~~~~~~C~~~~~-c~----------~~~~~l-~~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 86 (353)
T 2z80_A 21 ESSNQASLSCDRNGI-CK----------GSSGSL-NSIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86 (353)
T ss_dssp ------CCEECTTSE-EE----------CCSTTC-SSCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cCCCccCCCCCCCeE-ee----------CCCCCc-cccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCC
Confidence 456566677999887 63 455566 46777655 58999999999999655558999999999999999
Q ss_pred cCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCC--ccccccccceEEecCCc-ccC
Q 037275 109 SFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPA--SIGNLSTLERINVLGNG-LWG 185 (992)
Q Consensus 109 ~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~l~~n~-l~~ 185 (992)
++++..|..|+.+++|++|++++|+++ .+|...+.++++|++|+|++|.+++ +|. .+.++++|++|++++|. +.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~ 164 (353)
T 2z80_A 87 GINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTK 164 (353)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCE
T ss_pred ccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccc
Confidence 999777788999999999999999998 6787766688999999999999994 554 78899999999999994 656
Q ss_pred CcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhh
Q 037275 186 RIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLS 265 (992)
Q Consensus 186 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~ 265 (992)
..+..|.++++|++|++++|++++..|..+..+++|++|++++|++. .+|...+..+++|+.|++++|++.+..+..+.
T Consensus 165 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 243 (353)
T 2z80_A 165 IQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELS 243 (353)
T ss_dssp ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC---
T ss_pred cCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccc
Confidence 66778999999999999999999888999999999999999999986 56665555678888888888888776555433
Q ss_pred ---ccccCceeeeccccccc----cccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcC
Q 037275 266 ---NASNLVELTLFDNQFRG----KVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVL 338 (992)
Q Consensus 266 ---~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~ 338 (992)
....++.++|++|.+.+ ..+..+..+++|++|+|++|+++.++.. .+..+++|+.|++++|++.+..
T Consensus 244 ~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~------~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 244 TGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDG------IFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp ---CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTT------TTTTCTTCCEEECCSSCBCCCH
T ss_pred cccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHH------HHhcCCCCCEEEeeCCCccCcC
Confidence 35567777777777764 2456677888888888888888876653 2456677788888888777654
Q ss_pred C
Q 037275 339 P 339 (992)
Q Consensus 339 ~ 339 (992)
|
T Consensus 318 ~ 318 (353)
T 2z80_A 318 P 318 (353)
T ss_dssp H
T ss_pred C
Confidence 3
No 301
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3e-29 Score=288.74 Aligned_cols=258 Identities=19% Similarity=0.179 Sum_probs=180.3
Q ss_pred cceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceecc
Q 037275 348 TMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALS 427 (992)
Q Consensus 348 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 427 (992)
.++.|+|++|+|+++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 34555555555555555555556666666666666555555555556666666666666654444455556666666666
Q ss_pred CCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeeccccccc
Q 037275 428 SNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGE 507 (992)
Q Consensus 428 ~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 507 (992)
+|+|+...+..|..+++|++|++++|+..+.++...+.....++.|++++|.++ .+| .+..+++|++|+|++|++++.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEE
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCcc
Confidence 666655445555556666666666544444555555555555556677777776 444 478899999999999999998
Q ss_pred CCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCCccC
Q 037275 508 IPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGVFS 587 (992)
Q Consensus 508 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 587 (992)
.|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|.|.|...+...
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l~~ 302 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSW 302 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHHHH
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCchHHHH
Confidence 89999999999999999999999999999999999999999999998888889999999999999999999998654433
Q ss_pred Cccccccc--CCCCcCCCCCCC
Q 037275 588 NKTGISLS--GNGKVCGGLDEL 607 (992)
Q Consensus 588 ~~~~~~l~--~N~~~C~~~~~~ 607 (992)
+++..... .....|..|...
T Consensus 303 ~~~~~~~~~~~~~~~C~~P~~l 324 (440)
T 3zyj_A 303 WIKDMAPSNTACCARCNTPPNL 324 (440)
T ss_dssp HHHTTSCSSCSCCCBEEESTTT
T ss_pred HHHhccccCCccccCCCChhHh
Confidence 43332211 123457666543
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.7e-30 Score=279.27 Aligned_cols=215 Identities=20% Similarity=0.212 Sum_probs=162.6
Q ss_pred ccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCC-CCCCCccccCceeccCCcccCCCCCCccccccc
Q 037275 367 IRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIP-TSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNL 445 (992)
Q Consensus 367 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 445 (992)
+..+++|++|+|++|.+. .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..+..|..+++|
T Consensus 74 ~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 152 (306)
T 2z66_A 74 DFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 152 (306)
T ss_dssp HHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTC
T ss_pred cccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCC
Confidence 344566777777777776 456667777777777777777775444 467777788888888888777777777777777
Q ss_pred cccccccccccccCchhhhhhcccccccccccccccC-cccccccCCCCccEEeeecccccccCCcccccccccceeecc
Q 037275 446 IELHMADIELTGALPPQILSISTLSLSLDLSYNLLSG-TLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQ 524 (992)
Q Consensus 446 ~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 524 (992)
++|++++|.++ + ..|..+..+++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 153 ~~L~l~~n~l~-------------------------~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 207 (306)
T 2z66_A 153 EVLKMAGNSFQ-------------------------ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207 (306)
T ss_dssp CEEECTTCEEG-------------------------GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CEEECCCCccc-------------------------cccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECC
Confidence 77755555443 2 356677788888999999999888778888888999999999
Q ss_pred CCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCC-CcceEecCCCcCcccCCCCCccCC---cccccccCCCCc
Q 037275 525 GNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLS-FLEYLNLSYNHFEGEVPTKGVFSN---KTGISLSGNGKV 600 (992)
Q Consensus 525 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~~~---~~~~~l~~N~~~ 600 (992)
+|++++..+..+..+++|++|+|++|++++..|..+..++ +|++|++++|+|+|.++..+...+ .+.+....+...
T Consensus 208 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~ 287 (306)
T 2z66_A 208 HNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERME 287 (306)
T ss_dssp TSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCB
T ss_pred CCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccc
Confidence 9999877777888899999999999999988888888884 899999999999988775433333 334555677788
Q ss_pred CCCCCCC
Q 037275 601 CGGLDEL 607 (992)
Q Consensus 601 C~~~~~~ 607 (992)
|..|...
T Consensus 288 C~~p~~~ 294 (306)
T 2z66_A 288 CATPSDK 294 (306)
T ss_dssp EEESGGG
T ss_pred cCCchhh
Confidence 8877643
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=5e-31 Score=290.01 Aligned_cols=289 Identities=18% Similarity=0.240 Sum_probs=214.3
Q ss_pred HHHHHHHhhccCCCCCCCCCCcC--CCCCCceEeeEEcCCCCeEEEeeccccccCCccCCCC--CCCCcCCeeeccCCCC
Q 037275 11 LALLAIGSQLEDDPLGVTSSWNN--STNLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYV--GNLSFLRYLNLADNNF 86 (992)
Q Consensus 11 ~~ll~~~~~~~~~~~~~~~~w~~--~~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l--~~l~~L~~L~L~~n~l 86 (992)
++..+-+++-..|+..++..|+. ..++|.|.++-|.............+... ..++..+ ....+++.|+|++|++
T Consensus 15 ~~~~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~-~~~~~~l~~~~~~~l~~L~L~~n~l 93 (328)
T 4fcg_A 15 ENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRAL-KATADLLEDATQPGRVALELRSVPL 93 (328)
T ss_dssp --CCCC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHH-HHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred cceeeeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcch-hhhHHHHhcccccceeEEEccCCCc
Confidence 34444444444566667788864 46889999888843221111111111111 0111111 2357899999999999
Q ss_pred CccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCc
Q 037275 87 HGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPAS 166 (992)
Q Consensus 87 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~ 166 (992)
+ .+|..++.+++|++|+|++|+++ .+|..++.+++|++|++++|+++ .+|..+. .+++|++|+|++|.+.+.+|..
T Consensus 94 ~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~-~l~~L~~L~L~~n~~~~~~p~~ 169 (328)
T 4fcg_A 94 P-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIA-SLNRLRELSIRACPELTELPEP 169 (328)
T ss_dssp S-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGG-GCTTCCEEEEEEETTCCCCCSC
T ss_pred h-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHh-cCcCCCEEECCCCCCccccChh
Confidence 9 89999999999999999999999 99999999999999999999998 8888766 7889999999998888888888
Q ss_pred ccc---------ccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCc
Q 037275 167 IGN---------LSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPL 237 (992)
Q Consensus 167 ~~~---------l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~ 237 (992)
+.. +++|++|++++|.+. .+|..++++++|++|+|++|++++ +|..+..+++|++|++++|.+.
T Consensus 170 ~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~----- 242 (328)
T 4fcg_A 170 LASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTAL----- 242 (328)
T ss_dssp SEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTC-----
T ss_pred HhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcch-----
Confidence 765 667777777777764 666667777777777777777763 5556666666666666666554
Q ss_pred cccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhh
Q 037275 238 DIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTL 317 (992)
Q Consensus 238 ~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 317 (992)
+.+|..++.+++|++|+|++|.+.+..|..+..+++|++|+|++|++... .+..
T Consensus 243 --------------------~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~------iP~~ 296 (328)
T 4fcg_A 243 --------------------RNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR------LPSL 296 (328)
T ss_dssp --------------------CBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC------CCGG
T ss_pred --------------------hhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhh------ccHH
Confidence 45667788899999999999999999999999999999999999887552 2346
Q ss_pred ccCCCcceEeecCCCcCCCc
Q 037275 318 LTNCTELTAIGLDDNRFGGV 337 (992)
Q Consensus 318 l~~~~~L~~L~l~~n~l~~~ 337 (992)
+.++++|+.+++..+.+...
T Consensus 297 l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 297 IAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp GGGSCTTCEEECCGGGSCC-
T ss_pred HhhccCceEEeCCHHHHHHH
Confidence 88899999999998877643
No 304
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.5e-29 Score=270.47 Aligned_cols=236 Identities=25% Similarity=0.242 Sum_probs=206.1
Q ss_pred ccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCcc-ccccCCCCCCCccccCcee
Q 037275 347 STMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNF-LAGGIPTSLGNLTLLTNLA 425 (992)
Q Consensus 347 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~ 425 (992)
.++++|++++|+++++.+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|+ ++...+..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 457788888888888777888999999999999999988778889999999999999997 8767688899999999999
Q ss_pred ccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeeccccc
Q 037275 426 LSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFS 505 (992)
Q Consensus 426 L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 505 (992)
+++|++++..|..|..+++|++|++++| .+++..+..|..+++|++|+|++|+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n-------------------------~l~~~~~~~~~~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDN-------------------------ALQALPDDTFRDLGNLTHLFLHGNRIS 166 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSS-------------------------CCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCC-------------------------cccccCHhHhccCCCccEEECCCCccc
Confidence 9999999877888888888888855554 444445556888999999999999999
Q ss_pred ccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCCc
Q 037275 506 GEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGV 585 (992)
Q Consensus 506 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 585 (992)
+..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++|++|++++|+|.|.++..+.
T Consensus 167 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~ 246 (285)
T 1ozn_A 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPL 246 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHH
T ss_pred ccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHH
Confidence 87777899999999999999999998899999999999999999999988888899999999999999999999988777
Q ss_pred cCCcccccccCCCCcCCCCCCC
Q 037275 586 FSNKTGISLSGNGKVCGGLDEL 607 (992)
Q Consensus 586 ~~~~~~~~l~~N~~~C~~~~~~ 607 (992)
+.++.......+...|..|...
T Consensus 247 ~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 247 WAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHHHCCSEECCCBEEESGGG
T ss_pred HHHHHhcccccCccccCCchHh
Confidence 7778888888889999887643
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.8e-29 Score=288.89 Aligned_cols=239 Identities=20% Similarity=0.205 Sum_probs=172.9
Q ss_pred cceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceecc
Q 037275 348 TMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALS 427 (992)
Q Consensus 348 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 427 (992)
.++.|+|++|+|+++.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 45555555555555555555566666666666666655555555566666666666666654444555556666666666
Q ss_pred CCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeeccccccc
Q 037275 428 SNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGE 507 (992)
Q Consensus 428 ~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 507 (992)
+|+|+...+..|..+++|+.|++++|...+.++...+.....++.|+|++|++++. | .+..+++|++|+|++|++++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCccc
Confidence 66665544445556666666666654444455555555555555667777777643 3 578899999999999999999
Q ss_pred CCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCCccC
Q 037275 508 IPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGVFS 587 (992)
Q Consensus 508 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 587 (992)
.|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.|...+...
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~~l~~ 313 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAW 313 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTHHHHH
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCchHHHH
Confidence 99999999999999999999999999999999999999999999998888889999999999999999999998654333
Q ss_pred C
Q 037275 588 N 588 (992)
Q Consensus 588 ~ 588 (992)
+
T Consensus 314 ~ 314 (452)
T 3zyi_A 314 W 314 (452)
T ss_dssp H
T ss_pred H
Confidence 3
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4.1e-29 Score=278.82 Aligned_cols=191 Identities=18% Similarity=0.215 Sum_probs=129.5
Q ss_pred ccCCCcccEEEccCCcCCCCCC-ccccCCCCCcEEeccCc-cccccCCCCCCCccccCceeccCCcccCCCCCCcccccc
Q 037275 367 IRNLVNLVELCMDDNKLTGTIP-HAIGELKNLQLLYLDSN-FLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKN 444 (992)
Q Consensus 367 ~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 444 (992)
|.++++|++|++++|++++..+ ..|..+++|++|++++| .+++..+..|.++++|++|++++|++++..|..+..+++
T Consensus 120 ~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 199 (353)
T 2z80_A 120 FKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQN 199 (353)
T ss_dssp HTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSE
T ss_pred hCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcccc
Confidence 4556667777777777664333 36667777777777777 466555667777777777777777777666777777777
Q ss_pred ccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccc---ccccccee
Q 037275 445 LIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLS---ACTSLQQL 521 (992)
Q Consensus 445 L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L 521 (992)
|++|++++|+++ . ..+..+..+++|++|++++|.+++..+..+. ....++.+
T Consensus 200 L~~L~l~~n~l~-~------------------------~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l 254 (353)
T 2z80_A 200 VSHLILHMKQHI-L------------------------LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKF 254 (353)
T ss_dssp EEEEEEECSCST-T------------------------HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEE
T ss_pred CCeecCCCCccc-c------------------------chhhhhhhcccccEEECCCCccccccccccccccccchhhcc
Confidence 777755555543 1 1122233466777777777777655444332 24556667
Q ss_pred eccCCcccc----cCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 522 YLQGNSFSG----SIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 522 ~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
+|++|.+++ .+|..+..+++|++|+|++|+|++..+..|..+++|++|++++|++.|.+|.
T Consensus 255 ~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 255 TFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp EEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 777776664 4677788899999999999999844444468899999999999999998874
No 307
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=7.1e-29 Score=293.09 Aligned_cols=294 Identities=24% Similarity=0.309 Sum_probs=159.1
Q ss_pred CCCCCCCcCCCCCCceEeeEEc------CCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCC
Q 037275 25 LGVTSSWNNSTNLCQWTGVTCG------HRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLV 98 (992)
Q Consensus 25 ~~~~~~w~~~~~~c~w~gv~c~------~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 98 (992)
....+.|..+++||.|.|..|. -....++.|+++++++. .+|..+. ++|++|+|++|+++ .+|. .++
T Consensus 9 ~~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 9 DAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp -CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 3445778888899999775321 11123566777777664 5666554 56666777766666 4555 456
Q ss_pred CCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEe
Q 037275 99 RLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINV 178 (992)
Q Consensus 99 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 178 (992)
+|++|+|++|+|+ .+|. .+++|++|++++|+++ .+|. .+++|++|++
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~----------------------------~l~~L~~L~L 128 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA----------------------------LPSGLCKLWI 128 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC----------------------------CCTTCCEEEC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC----------------------------CCCCcCEEEC
Confidence 6666666666666 4554 4555666666666555 3333 2344455555
Q ss_pred cCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCC
Q 037275 179 LGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAG 258 (992)
Q Consensus 179 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~ 258 (992)
++|++. .+|.. +++|++|+|++|++++ +|. .+++|+.|++++|++++
T Consensus 129 ~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~------------------------- 175 (622)
T 3g06_A 129 FGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS------------------------- 175 (622)
T ss_dssp CSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-------------------------
T ss_pred CCCCCC-cCCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-------------------------
Confidence 555542 23332 2455555555555553 232 12345555555555541
Q ss_pred CCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcC
Q 037275 259 SIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVL 338 (992)
Q Consensus 259 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~ 338 (992)
+| ..+++|++|++++|+|++.+. .+++|+.|++++|.++.++.. +++|
T Consensus 176 -l~---~~~~~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l~~~----------~~~L-------------- 223 (622)
T 3g06_A 176 -LP---MLPSGLQELSVSDNQLASLPT----LPSELYKLWAYNNRLTSLPAL----------PSGL-------------- 223 (622)
T ss_dssp -CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSSCCCC----------CTTC--------------
T ss_pred -Cc---ccCCCCcEEECCCCCCCCCCC----ccchhhEEECcCCcccccCCC----------CCCC--------------
Confidence 11 113445555555555553222 124555556665555543310 1223
Q ss_pred CcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCc
Q 037275 339 PHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNL 418 (992)
Q Consensus 339 ~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 418 (992)
+.|++++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|.++
T Consensus 224 -----------~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l 283 (622)
T 3g06_A 224 -----------KELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHL 283 (622)
T ss_dssp -----------CEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGS
T ss_pred -----------CEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhc
Confidence 333333333332 22 23356667777777666 3443 4566777777777777 556667777
Q ss_pred cccCceeccCCcccCCCCCCccccc
Q 037275 419 TLLTNLALSSNDLQGSIPPSLGNCK 443 (992)
Q Consensus 419 ~~L~~L~L~~N~l~~~~~~~~~~l~ 443 (992)
++|+.|+|++|++++..|..+..++
T Consensus 284 ~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 284 SSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cccCEEEecCCCCCCcCHHHHHhcc
Confidence 7777777777777765555554443
No 308
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.5e-31 Score=321.45 Aligned_cols=189 Identities=14% Similarity=0.152 Sum_probs=129.3
Q ss_pred CCCCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCC---ccCCcccc------------CCCC
Q 037275 35 TNLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFH---GEIPHQIG------------RLVR 99 (992)
Q Consensus 35 ~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~---~~~p~~~~------------~l~~ 99 (992)
.-|++|.++.+... . .+.+..+ .....+..+..+++|++|+|+++... +.+|..++ .+++
T Consensus 39 ~vck~W~~~~~~~~-~---~l~~~~~-~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 113 (592)
T 3ogk_B 39 LVCRRWFKIDSETR-E---HVTMALC-YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQ 113 (592)
T ss_dssp TSCHHHHHHHHHHC-C---EEEESCG-GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTT
T ss_pred HHhHHHHHhhhccc-c---EEEEeec-cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCC
Confidence 34558999865321 1 2222222 22334445677888999999875321 24444333 7889
Q ss_pred CCEEEeecccCCCCCCcccccC--CCCcEeeccccc-ccccCChhhcccccccccccccccccCCC----CCCccccccc
Q 037275 100 LEALVLANNSFSGKIPTNLSRC--SNLISFNARRNN-LVGEIPAELGYNWLKLENLTIADNHLTGH----FPASIGNLST 172 (992)
Q Consensus 100 L~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~l~~n~-l~~~~p~~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~ 172 (992)
|++|+|++|.+++..+..++.. .+|++|++++|. ++......+...+++|++|+|++|.+++. ++..+.++++
T Consensus 114 L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~ 193 (592)
T 3ogk_B 114 LKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTS 193 (592)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCC
T ss_pred CCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCC
Confidence 9999999998887667777664 459999999887 32222223334678899999999988765 3334567788
Q ss_pred cceEEecCCccc----CCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCC
Q 037275 173 LERINVLGNGLW----GRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTN 229 (992)
Q Consensus 173 L~~L~l~~n~l~----~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N 229 (992)
|++|++++|.+. +.++..+.++++|+.|+|++|.+.+ +|..+..+++|++|+++.+
T Consensus 194 L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 194 LEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp CCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred ccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 999999988885 3344556677889999999888885 6777888888988888753
No 309
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=7.8e-30 Score=279.03 Aligned_cols=268 Identities=19% Similarity=0.170 Sum_probs=161.4
Q ss_pred CCCCcCCCCCCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCC-ccCCcccc-------CCCC
Q 037275 28 TSSWNNSTNLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFH-GEIPHQIG-------RLVR 99 (992)
Q Consensus 28 ~~~w~~~~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~-~~~p~~~~-------~l~~ 99 (992)
..+|.....|+.|..+.+......++.++++++.+ .+|+.+... |++|+|++|++. +.+|..+. .+++
T Consensus 21 ~~~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~ 96 (312)
T 1wwl_A 21 KPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISG 96 (312)
T ss_dssp SCCGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSC
T ss_pred ccchHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCC
Confidence 35676555666665544332344567777777777 666655544 777777777773 45666555 6777
Q ss_pred CCEEEeecccCCCCCCccc--ccCCCCcEeecccccccccCChhhcccc-----cccccccccccccCCCCCCccccccc
Q 037275 100 LEALVLANNSFSGKIPTNL--SRCSNLISFNARRNNLVGEIPAELGYNW-----LKLENLTIADNHLTGHFPASIGNLST 172 (992)
Q Consensus 100 L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~l~~n~l~~~~p~~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~ 172 (992)
|++|+|++|++++.+|..+ +.+++|++|++++|++++. |..+. .+ ++|++|+|++|++++..|..|+++++
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~-~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLA-ELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHH-HHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHH-HHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 7777777777777777765 6777777777777777744 54443 34 66777777777777666667777777
Q ss_pred cceEEecCCcccCC--cCCcc--CCCCcccEEeccCccccc--ccC-ccccccCCCcEEeccCCccCCCCCccccccccc
Q 037275 173 LERINVLGNGLWGR--IPNNL--GNLRNLILLNLGENRFSG--IVP-PSIFNISSLENVFLPTNRFNGSLPLDIGVSLPK 245 (992)
Q Consensus 173 L~~L~l~~n~l~~~--~~~~l--~~l~~L~~L~L~~n~l~~--~~p-~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~ 245 (992)
|++|++++|++.+. .|..+ ..+++|++|+|++|++++ .++ ..+..+++|++|++++|++++..|...+.
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~---- 250 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD---- 250 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC----
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh----
Confidence 77777777776443 23333 666777777777777662 112 22345567777777777666544433333
Q ss_pred cchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcce
Q 037275 246 LLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELT 325 (992)
Q Consensus 246 L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~ 325 (992)
.+++|++|+|++|+|+ .+|..+. ++|++|+|++|+++.++. +..+++|+
T Consensus 251 --------------------~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~p~--------~~~l~~L~ 299 (312)
T 1wwl_A 251 --------------------WPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRNPS--------PDELPQVG 299 (312)
T ss_dssp --------------------CCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSCCC--------TTTSCEEE
T ss_pred --------------------hcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCChh--------HhhCCCCC
Confidence 3455555555555555 2233332 455555555555554321 34445555
Q ss_pred EeecCCCcCCC
Q 037275 326 AIGLDDNRFGG 336 (992)
Q Consensus 326 ~L~l~~n~l~~ 336 (992)
.|++++|++++
T Consensus 300 ~L~L~~N~l~~ 310 (312)
T 1wwl_A 300 NLSLKGNPFLD 310 (312)
T ss_dssp EEECTTCTTTC
T ss_pred EEeccCCCCCC
Confidence 55555555553
No 310
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.9e-28 Score=267.83 Aligned_cols=248 Identities=19% Similarity=0.229 Sum_probs=166.5
Q ss_pred CceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCc-cccCCCCCCEEEeecccCCC--CC
Q 037275 38 CQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPH-QIGRLVRLEALVLANNSFSG--KI 114 (992)
Q Consensus 38 c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~Ls~n~l~~--~~ 114 (992)
|.|.+|+|+... + ..+|..+. ++|++|+|++|+++ .+|. .|..+++|++|+|++|+++. ..
T Consensus 7 C~~~~l~c~~~~------------l-~~ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 7 CSGTEIRCNSKG------------L-TSVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp EETTEEECCSSC------------C-SSCCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred eCCCEEEcCCCC------------c-ccCCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCc
Confidence 789999996532 2 34555432 57888888888888 5554 46788888888888888872 23
Q ss_pred CcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCC-CccccccccceEEecCCcccCCcCCccCC
Q 037275 115 PTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFP-ASIGNLSTLERINVLGNGLWGRIPNNLGN 193 (992)
Q Consensus 115 p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 193 (992)
|..+..+++|++|++++|.++ .+|..+. .+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..+..|..
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNFL-GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEE-EEEEEEE-TCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred ccccccccccCEEECCCCccc-cChhhcC-CCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 667777888888888888887 5666644 67888888888888885544 57788888888888888887777777888
Q ss_pred CCcccEEeccCccccc-ccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCce
Q 037275 194 LRNLILLNLGENRFSG-IVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVE 272 (992)
Q Consensus 194 l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~ 272 (992)
+++|++|+|++|++++ ..|..+..+++|++|++++|++++..| ..+..+++|+.|++++|++++..+..+..+++|++
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP-TAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT-TTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCH-HHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 8888888888888875 567788888888888888887773222 22223344444444444444333334444455555
Q ss_pred eeeccccccccccccccccC-ccceEecCCCCC
Q 037275 273 LTLFDNQFRGKVSIYFRSLK-NLEWLNLGSNNL 304 (992)
Q Consensus 273 L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l 304 (992)
|++++|++++..+..+..++ +|++|+|++|.+
T Consensus 228 L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~ 260 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260 (306)
T ss_dssp EECTTSCCCBCSSSSCCCCCTTCCEEECTTCCE
T ss_pred eECCCCCCcccCHHHHHhhhccCCEEEccCCCe
Confidence 55555555544444444442 445555544444
No 311
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=2.4e-30 Score=310.92 Aligned_cols=427 Identities=14% Similarity=0.076 Sum_probs=214.4
Q ss_pred cCCccccCCCCCCEEEeecccC---CCCCCcccc------------cCCCCcEeecccccccccCChhhcccccc-cccc
Q 037275 89 EIPHQIGRLVRLEALVLANNSF---SGKIPTNLS------------RCSNLISFNARRNNLVGEIPAELGYNWLK-LENL 152 (992)
Q Consensus 89 ~~p~~~~~l~~L~~L~Ls~n~l---~~~~p~~l~------------~l~~L~~L~l~~n~l~~~~p~~~~~~l~~-L~~L 152 (992)
.++..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..+...+++ |++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 3445566788899999987643 134443333 67778888888777766555555433344 7777
Q ss_pred ccccccc-CC-CCCCccccccccceEEecCCcccCC----cCCccCCCCcccEEeccCcccc----cccCccccccCCCc
Q 037275 153 TIADNHL-TG-HFPASIGNLSTLERINVLGNGLWGR----IPNNLGNLRNLILLNLGENRFS----GIVPPSIFNISSLE 222 (992)
Q Consensus 153 ~L~~n~l-~~-~~p~~~~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~----~~~p~~l~~l~~L~ 222 (992)
+|++|.- +. .++....++++|++|+|++|.+.+. ++..+..+++|++|+|++|.++ +.++..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 7777651 11 1122223566777777777766444 2333445666777777777665 23344445666677
Q ss_pred EEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeecccccc---ccccccccccCccceEec
Q 037275 223 NVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFR---GKVSIYFRSLKNLEWLNL 299 (992)
Q Consensus 223 ~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~---~~~~~~~~~l~~L~~L~L 299 (992)
+|++++|.+.+ +|..+..+++|++|+++.+... ......+..+++|+.|++
T Consensus 224 ~L~L~~~~~~~--------------------------l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l 277 (592)
T 3ogk_B 224 SVKVGDFEILE--------------------------LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGL 277 (592)
T ss_dssp EEECSSCBGGG--------------------------GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEE
T ss_pred EEeccCccHHH--------------------------HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCc
Confidence 77776666552 3334444455555555432211 112223344444555544
Q ss_pred CCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEcc
Q 037275 300 GSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMD 379 (992)
Q Consensus 300 ~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~ 379 (992)
+++.... ....+..+++|+.|++++|.+.+.....+..-.++|++|+++++...+.++..+..+++|++|+++
T Consensus 278 ~~~~~~~-------l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 278 SYMGPNE-------MPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp TTCCTTT-------GGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred cccchhH-------HHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 4432211 112233444455555555544332221111122345555555222222222223445666666666
Q ss_pred C-----------CcCCCCC-CccccCCCCCcEEeccCccccccCCCCCCC-ccccCceecc----CCcccCC-----CCC
Q 037275 380 D-----------NKLTGTI-PHAIGELKNLQLLYLDSNFLAGGIPTSLGN-LTLLTNLALS----SNDLQGS-----IPP 437 (992)
Q Consensus 380 ~-----------N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~~~ 437 (992)
+ |.+++.. +..+..+++|+.|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++.
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~ 430 (592)
T 3ogk_B 351 RGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS 430 (592)
T ss_dssp CCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH
T ss_pred cCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH
Confidence 2 3443221 122334566666666666666544444433 5566666664 4555532 112
Q ss_pred CccccccccccccccccccccCchhhhhhcccccccccccccccCccccccc-CCCCccEEeeecccccc-cCCcccccc
Q 037275 438 SLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVG-NLKNLVYFNISVNRFSG-EIPVTLSAC 515 (992)
Q Consensus 438 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~-~~~~~~~~l 515 (992)
.+.++++|+.|+++.|. |.+++..+..+. .+++|++|+|++|++++ .++..+.++
T Consensus 431 ~~~~~~~L~~L~L~~~~-----------------------~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 487 (592)
T 3ogk_B 431 LLIGCKKLRRFAFYLRQ-----------------------GGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGC 487 (592)
T ss_dssp HHHHCTTCCEEEEECCG-----------------------GGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCC
T ss_pred HHHhCCCCCEEEEecCC-----------------------CCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcC
Confidence 24456666666554322 112222222222 25566666666666654 233344556
Q ss_pred cccceeeccCCccccc-CCccccccCCCCEEECCCcccCCCChhhh-hcCCCcceEec
Q 037275 516 TSLQQLYLQGNSFSGS-IPSSLSSLKSIKELDMSSNNLSGQIPEYL-ENLSFLEYLNL 571 (992)
Q Consensus 516 ~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l 571 (992)
++|++|+|++|.|++. ++..+..+++|++|+|++|++++.....+ ..++.+....+
T Consensus 488 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~ 545 (592)
T 3ogk_B 488 PNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELI 545 (592)
T ss_dssp TTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEE
T ss_pred cccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEe
Confidence 6666666666666533 23333456666666666666664432222 23454444433
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2e-27 Score=274.42 Aligned_cols=251 Identities=22% Similarity=0.236 Sum_probs=222.2
Q ss_pred ceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccC
Q 037275 349 MTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSS 428 (992)
Q Consensus 349 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 428 (992)
...++.+++.++. +|..+. +++++|+|++|++++..+..|..+++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 4556677777774 555444 6899999999999988899999999999999999999988889999999999999999
Q ss_pred CcccCCCCCCccccccccccccccccccccCchhhhhhccccccccccc-ccccCcccccccCCCCccEEeeeccccccc
Q 037275 429 NDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSY-NLLSGTLPLEVGNLKNLVYFNISVNRFSGE 507 (992)
Q Consensus 429 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 507 (992)
|+|++..+..|..+++|++|++++|+++ .+|...+.....++.|++++ |.+....+..|.++++|++|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 9999877788999999999999999998 67777777778888999999 455544445799999999999999999954
Q ss_pred CCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCC-Ccc
Q 037275 508 IPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTK-GVF 586 (992)
Q Consensus 508 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~ 586 (992)
| .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++.++.. ..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 4 5889999999999999999999999999999999999999999999999999999999999999999877653 457
Q ss_pred CCcccccccCCCCcCCCCC
Q 037275 587 SNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 587 ~~~~~~~l~~N~~~C~~~~ 605 (992)
+.++.+++.+|||.|+|..
T Consensus 290 ~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TTCCEEECCSSCEECSTTT
T ss_pred cCCCEEEccCCCcCCCCCc
Confidence 8899999999999999854
No 313
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.8e-27 Score=273.84 Aligned_cols=252 Identities=22% Similarity=0.247 Sum_probs=222.2
Q ss_pred cceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceecc
Q 037275 348 TMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALS 427 (992)
Q Consensus 348 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 427 (992)
....++..+++++ .+|..+. ++++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3456777777777 4555554 689999999999998888999999999999999999998888899999999999999
Q ss_pred CCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccc-cccCcccccccCCCCccEEeeecccccc
Q 037275 428 SNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYN-LLSGTLPLEVGNLKNLVYFNISVNRFSG 506 (992)
Q Consensus 428 ~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 506 (992)
+|+|++..+..|..+++|++|++++|+++ .+|...+.....++.|++++| .+....+..|.++++|++|+|++|+++
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 99999777778999999999999999998 566767777778889999995 455444457999999999999999999
Q ss_pred cCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCC-Cc
Q 037275 507 EIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTK-GV 585 (992)
Q Consensus 507 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~ 585 (992)
.+| .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++++.++.. ..
T Consensus 199 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 199 EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 455 4889999999999999999988999999999999999999999999999999999999999999999877653 55
Q ss_pred cCCcccccccCCCCcCCCCC
Q 037275 586 FSNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 586 ~~~~~~~~l~~N~~~C~~~~ 605 (992)
++.++.+++.+|||.|+|..
T Consensus 278 l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CTTCCEEECCSSCEECSSTT
T ss_pred ccCCCEEEcCCCCccCCCCc
Confidence 78899999999999999853
No 314
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=7.4e-29 Score=287.74 Aligned_cols=243 Identities=15% Similarity=0.117 Sum_probs=133.6
Q ss_pred cceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEec
Q 037275 323 ELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYL 402 (992)
Q Consensus 323 ~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 402 (992)
+|+.|+|++|.+.+..|..+..+. +|++|+|++|.+++.+| |..+++|++|+|++|.+++.. ..++|+.|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCT-TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCC-CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEEC
Confidence 444444444444444444444432 35555555555554444 566666666666666665322 1256666666
Q ss_pred cCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccC
Q 037275 403 DSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSG 482 (992)
Q Consensus 403 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~ 482 (992)
++|.|++..+.. +++|+.|+|++|.|++..|..|+.+++|+.|+++ +|.+++
T Consensus 107 ~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls-------------------------~N~l~~ 158 (487)
T 3oja_A 107 ANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK-------------------------LNEIDT 158 (487)
T ss_dssp CSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECT-------------------------TSCCCE
T ss_pred cCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECC-------------------------CCCCCC
Confidence 666666544432 3556666666666666556566666666666444 444444
Q ss_pred ccccccc-CCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhh
Q 037275 483 TLPLEVG-NLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLE 561 (992)
Q Consensus 483 ~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 561 (992)
..|..+. .+++|++|+|++|.|++..+ +..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+|++ +|..+.
T Consensus 159 ~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~ 234 (487)
T 3oja_A 159 VNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALR 234 (487)
T ss_dssp EEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCC
T ss_pred cChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhc
Confidence 4444443 56666666666666664422 2345666666666666664 33336666666666666666663 455566
Q ss_pred cCCCcceEecCCCcCcccCC--CCCccCCccccccc-------CCCCcCCCCC
Q 037275 562 NLSFLEYLNLSYNHFEGEVP--TKGVFSNKTGISLS-------GNGKVCGGLD 605 (992)
Q Consensus 562 ~l~~L~~L~l~~N~l~~~~~--~~~~~~~~~~~~l~-------~N~~~C~~~~ 605 (992)
.+++|+.|++++|++.|... ....++.+..+.+. +|++.|.++.
T Consensus 235 ~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c~~~~ 287 (487)
T 3oja_A 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPT 287 (487)
T ss_dssp CCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCCSSTT
T ss_pred cCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccccccccCCCcccccCCc
Confidence 66666666666666663221 11223333333333 6777776643
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=9.6e-29 Score=270.34 Aligned_cols=255 Identities=18% Similarity=0.182 Sum_probs=205.0
Q ss_pred CCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccC-CCCCCcccc-------cCCCCcEeecccccccccCCh
Q 037275 69 YVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSF-SGKIPTNLS-------RCSNLISFNARRNNLVGEIPA 140 (992)
Q Consensus 69 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l-~~~~p~~l~-------~l~~L~~L~l~~n~l~~~~p~ 140 (992)
..+..++|++|++++|.+ .+|..+... |++|+|++|++ .+.+|..+. .+++|++|++++|++++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 345677889999999999 688877665 88899999998 456777766 788999999999999888888
Q ss_pred hhc-ccccccccccccccccCCCCCCccccc-----cccceEEecCCcccCCcCCccCCCCcccEEeccCcccccc--cC
Q 037275 141 ELG-YNWLKLENLTIADNHLTGHFPASIGNL-----STLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGI--VP 212 (992)
Q Consensus 141 ~~~-~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~--~p 212 (992)
.++ ..+++|++|+|++|++++. |..++.+ ++|++|++++|++.+..|..|+++++|++|+|++|++.+. .|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 764 5788899999999999876 8888877 8899999999998777778888899999999999987754 23
Q ss_pred ccc--cccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeecccccccccc-cccc
Q 037275 213 PSI--FNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVS-IYFR 289 (992)
Q Consensus 213 ~~l--~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~ 289 (992)
..+ ..+++|++|++++|++++ ++. .....+..+++|++|+|++|++++..+ ..+.
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~-~~~---------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 250 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMET-PSG---------------------VCSALAAARVQLQGLDLSHNSLRDAAGAPSCD 250 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCC-HHH---------------------HHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC
T ss_pred HHHHhccCCCCCEEECCCCcCcc-hHH---------------------HHHHHHhcCCCCCEEECCCCcCCcccchhhhh
Confidence 344 778888888888888762 110 112345678999999999999998774 5677
Q ss_pred ccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccc
Q 037275 290 SLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGI 362 (992)
Q Consensus 290 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~ 362 (992)
.+++|++|+|++|+++.++.. +. ++|+.|++++|++++. |. +..+ ++|++|++++|++++.
T Consensus 251 ~l~~L~~L~Ls~N~l~~ip~~-------~~--~~L~~L~Ls~N~l~~~-p~-~~~l-~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLKQVPKG-------LP--AKLSVLDLSYNRLDRN-PS-PDEL-PQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CCTTCCEEECTTSCCSSCCSS-------CC--SEEEEEECCSSCCCSC-CC-TTTS-CEEEEEECTTCTTTCC
T ss_pred hcCCCCEEECCCCccChhhhh-------cc--CCceEEECCCCCCCCC-hh-HhhC-CCCCEEeccCCCCCCC
Confidence 789999999999999977653 22 7899999999999987 55 6665 4699999999999853
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.6e-26 Score=273.02 Aligned_cols=268 Identities=21% Similarity=0.300 Sum_probs=201.5
Q ss_pred cCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccc
Q 037275 75 FLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTI 154 (992)
Q Consensus 75 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L 154 (992)
.+++|++++|+++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls------------------------ 89 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVS------------------------ 89 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEEC------------------------
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcC------------------------
Confidence 4678888888887 7777665 67888888888777 5554 34445555554
Q ss_pred cccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCC
Q 037275 155 ADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGS 234 (992)
Q Consensus 155 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 234 (992)
+|+++ .+|. .+++|++|++++|.+.+ +|. .+++|+.|++++|++++ +|.. +++|++|++++|++++
T Consensus 90 -~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 90 -GNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS- 155 (622)
T ss_dssp -SCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-
T ss_pred -CCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-
Confidence 44444 3444 56788899999998854 555 56889999999999995 6654 4789999999998872
Q ss_pred CCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchh
Q 037275 235 LPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDF 314 (992)
Q Consensus 235 ~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 314 (992)
+|. ...+|+.|++++|+|++.+ ..+++|+.|+|++|+++.++..
T Consensus 156 -------------------------l~~---~~~~L~~L~L~~N~l~~l~----~~~~~L~~L~Ls~N~l~~l~~~---- 199 (622)
T 3g06_A 156 -------------------------LPA---LPSELCKLWAYNNQLTSLP----MLPSGLQELSVSDNQLASLPTL---- 199 (622)
T ss_dssp -------------------------CCC---CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSCCCCC----
T ss_pred -------------------------cCC---ccCCCCEEECCCCCCCCCc----ccCCCCcEEECCCCCCCCCCCc----
Confidence 222 1357899999999999654 4568899999999988765431
Q ss_pred hhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCC
Q 037275 315 LTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGEL 394 (992)
Q Consensus 315 ~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 394 (992)
.++ |+.|++++|.++. +|. .+++|+.|+|++|++++ +| ..+
T Consensus 200 ------~~~-------------------------L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l 240 (622)
T 3g06_A 200 ------PSE-------------------------LYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLP 240 (622)
T ss_dssp ------CTT-------------------------CCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCC
T ss_pred ------cch-------------------------hhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCC
Confidence 133 5555555555553 332 24789999999999995 55 456
Q ss_pred CCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhc
Q 037275 395 KNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSIS 467 (992)
Q Consensus 395 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~ 467 (992)
++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++++|.+++..|..+..+.
T Consensus 241 ~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 241 SELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 89999999999999 5555 5788999999999999 6788999999999999999999988887766554
No 317
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=2.3e-28 Score=287.16 Aligned_cols=186 Identities=15% Similarity=0.046 Sum_probs=130.1
Q ss_pred ccccccceEEEEeEECCCCeEEEEEEeeccCC----------CchhHHHHHHHHHHhc-cCCcceeEEEEeecccccCcc
Q 037275 686 MIGQGSFGFVYKGNLGENGMMVAVKVINLKQK----------GASNGFVAECQALRNI-RHRNLIKIITICSSIDFKGVD 754 (992)
Q Consensus 686 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 754 (992)
..+.|++|.+..++....|+.||+|++..... ...+++.+|+++|+++ .|+||+++++++ ++..
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHG-----ENAQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEE-----ECSS
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----EECC
Confidence 45667777777777666788999999964321 2235689999999999 799999999994 5667
Q ss_pred eEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeec
Q 037275 755 FQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDF 834 (992)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 834 (992)
..||||||++|++|.+++.... +++.. +|+.||+.||+|+|++ |||||||||+|||++++|.+||+||
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGE------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTC------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhCC------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeec
Confidence 7899999999999999998654 35554 4789999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCCCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCC
Q 037275 835 GLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRP 897 (992)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p 897 (992)
|+|+..... .......+||+.|||||++.+ .+..++|+||+|++++++.++..|
T Consensus 384 GlAr~~~~~--------~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 384 GSIVTTPQD--------CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp TTEESCC-----------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred ccCeeCCCC--------CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 999866432 122344679999999999875 467789999999998888766544
No 318
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1.6e-26 Score=249.62 Aligned_cols=196 Identities=22% Similarity=0.229 Sum_probs=148.0
Q ss_pred ccCCCccCCCcccEEEccCCc-CCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCcc
Q 037275 362 IIPTGIRNLVNLVELCMDDNK-LTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLG 440 (992)
Q Consensus 362 ~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 440 (992)
+.|..|..+++|++|++++|. +....|..|..+++|++|++++|++++..+..|.++++|++|++++|++++..+..|.
T Consensus 71 ~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 150 (285)
T 1ozn_A 71 IDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR 150 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred eCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc
Confidence 445566677777778887776 6656677777788888888888888777677777888888888888888866666677
Q ss_pred ccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccce
Q 037275 441 NCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQ 520 (992)
Q Consensus 441 ~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 520 (992)
.+++|++|++++|++ ++..+..|..+++|++|+|++|++++..|..|..+++|+.
T Consensus 151 ~l~~L~~L~l~~n~l-------------------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 205 (285)
T 1ozn_A 151 DLGNLTHLFLHGNRI-------------------------SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205 (285)
T ss_dssp TCTTCCEEECCSSCC-------------------------CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred cCCCccEEECCCCcc-------------------------cccCHHHhcCccccCEEECCCCcccccCHhHccCcccccE
Confidence 788887775544444 3333445777888999999999998888888999999999
Q ss_pred eeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCC
Q 037275 521 LYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTK 583 (992)
Q Consensus 521 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~ 583 (992)
|+|++|+|++..+..+..+++|++|+|++|++....+ ...-...++.+..+.|.+.|..|..
T Consensus 206 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~-~~~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 206 LYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp EECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG-GHHHHHHHHHCCSEECCCBEEESGG
T ss_pred eeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC-cHHHHHHHHhcccccCccccCCchH
Confidence 9999999997766778899999999999999975333 2222345666778888998887763
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.2e-27 Score=262.33 Aligned_cols=250 Identities=16% Similarity=0.178 Sum_probs=170.4
Q ss_pred hhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcc
Q 037275 262 ESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHS 341 (992)
Q Consensus 262 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~ 341 (992)
..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++.+. .+..+++|+
T Consensus 28 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~--------~~~~l~~L~---------------- 83 (317)
T 3o53_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL--------DLESLSTLR---------------- 83 (317)
T ss_dssp HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE--------EETTCTTCC----------------
T ss_pred HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch--------hhhhcCCCC----------------
Confidence 33444556666666666666666666666666666666666654311 123333333
Q ss_pred cccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCcccc
Q 037275 342 IANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLL 421 (992)
Q Consensus 342 ~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 421 (992)
+|++++|++++.. ..++|++|++++|++++..+. .+++|+.|++++|++++..+..+..+++|
T Consensus 84 ---------~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L 146 (317)
T 3o53_A 84 ---------TLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRV 146 (317)
T ss_dssp ---------EEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSE
T ss_pred ---------EEECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCC
Confidence 3333333333222 225777777877777754333 35677888888888876666677777778
Q ss_pred CceeccCCcccCCCCCCcc-ccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeee
Q 037275 422 TNLALSSNDLQGSIPPSLG-NCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNIS 500 (992)
Q Consensus 422 ~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls 500 (992)
++|+|++|++++..+..+. .+++|++|++++|+++ +. + ....+++|++|+|+
T Consensus 147 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-------------------------~~-~-~~~~l~~L~~L~Ls 199 (317)
T 3o53_A 147 QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-------------------------DV-K-GQVVFAKLKTLDLS 199 (317)
T ss_dssp EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-------------------------EE-E-CCCCCTTCCEEECC
T ss_pred CEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc-------------------------cc-c-cccccccCCEEECC
Confidence 8888888877765555553 5667776655555544 22 2 22348899999999
Q ss_pred cccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccC-CCChhhhhcCCCcceEecCC-CcCcc
Q 037275 501 VNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLS-GQIPEYLENLSFLEYLNLSY-NHFEG 578 (992)
Q Consensus 501 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~-N~l~~ 578 (992)
+|++++ +|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|++++ +.+.+
T Consensus 200 ~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 200 SNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp SSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred CCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccC
Confidence 999985 4555889999999999999998 57888999999999999999998 78888899999999999984 45555
Q ss_pred cCC
Q 037275 579 EVP 581 (992)
Q Consensus 579 ~~~ 581 (992)
..+
T Consensus 278 ~~~ 280 (317)
T 3o53_A 278 QNE 280 (317)
T ss_dssp SSS
T ss_pred Cch
Confidence 443
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.8e-27 Score=260.82 Aligned_cols=257 Identities=17% Similarity=0.147 Sum_probs=158.3
Q ss_pred ccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeec
Q 037275 197 LILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLF 276 (992)
Q Consensus 197 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~ 276 (992)
++.++++.+.+....+..+..+++|++|++++|+++ +..|..|+.+++|++|+|+
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~-------------------------~~~~~~~~~l~~L~~L~Ls 66 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLS-------------------------QISAADLAPFTKLELLNLS 66 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCC-------------------------CCCHHHHTTCTTCCEEECT
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccC-------------------------cCCHHHhhCCCcCCEEECC
Confidence 455666777666444444445556666666666655 3556778888999999999
Q ss_pred cccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeC
Q 037275 277 DNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAG 356 (992)
Q Consensus 277 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~ 356 (992)
+|++++..+ |..+++|++|+|++|+++.++ ..++|+.|++++|++.+..+..+ .+|++|++++
T Consensus 67 ~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----------~~~~L~~L~l~~n~l~~~~~~~~----~~L~~L~l~~ 129 (317)
T 3o53_A 67 SNVLYETLD--LESLSTLRTLDLNNNYVQELL-----------VGPSIETLHAANNNISRVSCSRG----QGKKNIYLAN 129 (317)
T ss_dssp TSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----------ECTTCCEEECCSSCCSEEEECCC----SSCEEEECCS
T ss_pred CCcCCcchh--hhhcCCCCEEECcCCcccccc-----------CCCCcCEEECCCCccCCcCcccc----CCCCEEECCC
Confidence 999987665 888999999999999876532 33677777777777775544332 2466666666
Q ss_pred CccccccCCCccCCCcccEEEccCCcCCCCCCcccc-CCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCC
Q 037275 357 NQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIG-ELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSI 435 (992)
Q Consensus 357 n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 435 (992)
|++++..+..+..+++|++|+|++|++++..+..+. .+++|++|+|++|+|++. +. ...+++|++|+|++|+|++ +
T Consensus 130 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l 206 (317)
T 3o53_A 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-M 206 (317)
T ss_dssp SCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-E
T ss_pred CCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-c
Confidence 666666666666666666666666666655555443 466666666666666643 21 2235566666666666653 3
Q ss_pred CCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeeccccc-ccCCccccc
Q 037275 436 PPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFS-GEIPVTLSA 514 (992)
Q Consensus 436 ~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~ 514 (992)
|..+..+++|++|++++|++ + .+|..+..+++|++|++++|.++ +.+|..+..
T Consensus 207 ~~~~~~l~~L~~L~L~~N~l-------------------------~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~ 260 (317)
T 3o53_A 207 GPEFQSAAGVTWISLRNNKL-------------------------V-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (317)
T ss_dssp CGGGGGGTTCSEEECTTSCC-------------------------C-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHT
T ss_pred hhhhcccCcccEEECcCCcc-------------------------c-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhc
Confidence 33355555555553333332 2 33444555555556666665555 445555555
Q ss_pred ccccceeecc
Q 037275 515 CTSLQQLYLQ 524 (992)
Q Consensus 515 l~~L~~L~L~ 524 (992)
+++|+.|+++
T Consensus 261 ~~~L~~l~l~ 270 (317)
T 3o53_A 261 NQRVQTVAKQ 270 (317)
T ss_dssp CHHHHHHHHH
T ss_pred cccceEEECC
Confidence 5555555555
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=1.6e-29 Score=303.98 Aligned_cols=459 Identities=16% Similarity=0.156 Sum_probs=267.9
Q ss_pred CCCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCc---cCCc------------cccCCCCC
Q 037275 36 NLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHG---EIPH------------QIGRLVRL 100 (992)
Q Consensus 36 ~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~---~~p~------------~~~~l~~L 100 (992)
-|++|.++.. .....++++.... ......+..+++|+.|+|+++.... ..|. ....+++|
T Consensus 33 vck~W~~~~~----~~~~~l~~~~~~~-~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 33 VCKSWYEIER----WCRRKVFIGNCYA-VSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp SCHHHHHHHH----HHCCEEEESSTTS-SCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHHhhh----hhceEEeeccccc-cCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 3558988822 1223455554321 1112245678889999999875321 1221 13467889
Q ss_pred CEEEeecccCCCCCCcccc-cCCCCcEeecccc-cccccCChhhcccccccccccccccccCCCCCCccc----cccccc
Q 037275 101 EALVLANNSFSGKIPTNLS-RCSNLISFNARRN-NLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIG----NLSTLE 174 (992)
Q Consensus 101 ~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~l~~n-~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~l~~L~ 174 (992)
++|+|++|.+++..+..+. .+++|++|++++| .+++.....+..++++|++|+|++|.+++..+..+. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999998877677775 6889999999988 555433444555788899999998887765544443 566888
Q ss_pred eEEecCCc--cc-CCcCCccCCCCcccEEeccCc-ccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhh
Q 037275 175 RINVLGNG--LW-GRIPNNLGNLRNLILLNLGEN-RFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFI 250 (992)
Q Consensus 175 ~L~l~~n~--l~-~~~~~~l~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~ 250 (992)
+|++++|. +. ..++..+.++++|++|+|++| .+.+ +|..+..+++|++|+++.+...
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~------------------ 248 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAE------------------ 248 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCC------------------
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCc------------------
Confidence 88888876 21 111122244578888888887 4443 6777777888888887655321
Q ss_pred ccccccCCCCchhhhccccCcee-eeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeec
Q 037275 251 VAENNFAGSIPESLSNASNLVEL-TLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGL 329 (992)
Q Consensus 251 l~~n~l~~~~p~~l~~l~~L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l 329 (992)
+..|.+.+ ++..+.++++|+.| .+.+... ...+..+..+++|++|+|++|.++.. .....+..+++|+.|++
T Consensus 249 ~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~-----~l~~~~~~~~~L~~L~l 321 (594)
T 2p1m_B 249 VRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSY-----DLVKLLCQCPKLQRLWV 321 (594)
T ss_dssp CCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHH-----HHHHHHTTCTTCCEEEE
T ss_pred cchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHH-----HHHHHHhcCCCcCEEeC
Confidence 12223332 34467777788877 4443332 23444455677888888888775421 12223445666666666
Q ss_pred CCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccC---------CcCCCCCCcccc-CCCCCcE
Q 037275 330 DDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDD---------NKLTGTIPHAIG-ELKNLQL 399 (992)
Q Consensus 330 ~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~---------N~l~~~~~~~~~-~l~~L~~ 399 (992)
++| +.......+ ...+++|++|++++ +.+++.....+. .+++|+.
T Consensus 322 ~~~-~~~~~l~~l------------------------~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~ 376 (594)
T 2p1m_B 322 LDY-IEDAGLEVL------------------------ASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLES 376 (594)
T ss_dssp EGG-GHHHHHHHH------------------------HHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCE
T ss_pred cCc-cCHHHHHHH------------------------HHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHH
Confidence 655 221111111 12345555565522 333322112222 3566666
Q ss_pred EeccCccccccCCCCCC-CccccCceecc--C----CcccCCC-----CCCccccccccccccccccccccCchhhhhhc
Q 037275 400 LYLDSNFLAGGIPTSLG-NLTLLTNLALS--S----NDLQGSI-----PPSLGNCKNLIELHMADIELTGALPPQILSIS 467 (992)
Q Consensus 400 L~L~~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~~-----~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~ 467 (992)
|+++.|++++..+..+. .+++|+.|+++ + |.++... +..+..+++|+.|++++
T Consensus 377 L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~--------------- 441 (594)
T 2p1m_B 377 VLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG--------------- 441 (594)
T ss_dssp EEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS---------------
T ss_pred HHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC---------------
Confidence 66666666544333333 35666666666 2 3343110 01134445555554433
Q ss_pred ccccccccccccccCcccccccC-CCCccEEeeecccccccCCccc-ccccccceeeccCCcccccCCc-cccccCCCCE
Q 037275 468 TLSLSLDLSYNLLSGTLPLEVGN-LKNLVYFNISVNRFSGEIPVTL-SACTSLQQLYLQGNSFSGSIPS-SLSSLKSIKE 544 (992)
Q Consensus 468 ~~~~~L~l~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~ 544 (992)
.+++..+..+.. +++|++|+|++|.+++..+..+ .++++|++|+|++|.+++.... ....+++|++
T Consensus 442 -----------~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~ 510 (594)
T 2p1m_B 442 -----------LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRS 510 (594)
T ss_dssp -----------SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSE
T ss_pred -----------cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCE
Confidence 233233333333 6788888888888875544444 5678888888888888654433 3445788888
Q ss_pred EECCCcccCCCChhhh-hcCCCcceEecCCCcC
Q 037275 545 LDMSSNNLSGQIPEYL-ENLSFLEYLNLSYNHF 576 (992)
Q Consensus 545 L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l 576 (992)
|+|++|+++......+ ..++.|+...+..+.-
T Consensus 511 L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 511 LWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp EEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred EeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 8888888854333444 4567777766665543
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.1e-25 Score=241.71 Aligned_cols=213 Identities=20% Similarity=0.214 Sum_probs=185.8
Q ss_pred ccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceec
Q 037275 347 STMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLAL 426 (992)
Q Consensus 347 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 426 (992)
..+++|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46888889999998888888999999999999999999777788999999999999999999888888999999999999
Q ss_pred cCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccC-cccccccCCCCccEEeeeccccc
Q 037275 427 SSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSG-TLPLEVGNLKNLVYFNISVNRFS 505 (992)
Q Consensus 427 ~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~ 505 (992)
++|++++..+..+..+++|++|++++|+++ + .+|..+..+++|++|+|++|+++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQ-------------------------SFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCC-------------------------CCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccc-------------------------eecCchhhccCCCCCEEECCCCCCC
Confidence 999999877778899999998866655554 3 25788899999999999999999
Q ss_pred ccCCcccccccccc----eeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCC
Q 037275 506 GEIPVTLSACTSLQ----QLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVP 581 (992)
Q Consensus 506 ~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 581 (992)
+..+..|..+.+|+ .|++++|++++..+..+.. .+|++|+|++|+|++..+..|..+++|+.|++++|+|.|.++
T Consensus 163 ~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 163 SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp EECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88888898888888 8999999999766655554 589999999999998777788999999999999999999998
Q ss_pred CCCc
Q 037275 582 TKGV 585 (992)
Q Consensus 582 ~~~~ 585 (992)
....
T Consensus 242 ~l~~ 245 (276)
T 2z62_A 242 RIDY 245 (276)
T ss_dssp TTHH
T ss_pred chHH
Confidence 6543
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.5e-26 Score=265.19 Aligned_cols=224 Identities=23% Similarity=0.265 Sum_probs=174.3
Q ss_pred cCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccc
Q 037275 368 RNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIE 447 (992)
Q Consensus 368 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 447 (992)
..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|++.. ..++|+.
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCE
Confidence 344467777777777766666667777777777777777665444 666677777777777766422 2266677
Q ss_pred cccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccc-cccccceeeccCC
Q 037275 448 LHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLS-ACTSLQQLYLQGN 526 (992)
Q Consensus 448 L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N 526 (992)
|++++|.+++..+.. .+.+..|+|++|.+++..|..++.+++|++|+|++|.+++.+|..+. .+++|+.|+|++|
T Consensus 104 L~L~~N~l~~~~~~~----l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N 179 (487)
T 3oja_A 104 LHAANNNISRVSCSR----GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (487)
T ss_dssp EECCSSCCCCEEECC----CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EECcCCcCCCCCccc----cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCC
Confidence 777777766444332 23456678888999888888999999999999999999998888886 7999999999999
Q ss_pred cccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCCccCCcccccccCCCCcCCCCC
Q 037275 527 SFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGVFSNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 527 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N~~~C~~~~ 605 (992)
.|++..+ +..+++|++|+|++|+|++..| .+..+++|+.|+|++|.+++.++....++.+..+++.+|++.|++++
T Consensus 180 ~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 180 FIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp CCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred ccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcchH
Confidence 9997633 4469999999999999997544 59999999999999999999877777788999999999999997643
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=3.7e-25 Score=236.54 Aligned_cols=217 Identities=19% Similarity=0.276 Sum_probs=171.9
Q ss_pred CCCCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCC
Q 037275 35 TNLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKI 114 (992)
Q Consensus 35 ~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 114 (992)
.++|.|.|+.|.-. ..++.+|++++.+. .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 47899999988532 23567999999985 5777664 68999999999999655668999999999999999998443
Q ss_pred CcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCC
Q 037275 115 PTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNL 194 (992)
Q Consensus 115 p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 194 (992)
+..+..+++|++|++++|+++ .+|...+..+++|++|+|++|.+++..|..|.++++|++|++++|.+.+..+..|..+
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 156 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred hhhhcCCCCCCEEECCCCcCC-cCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC
Confidence 445688999999999999988 6776666678889999999998887777778888888888888888876666668888
Q ss_pred CcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceee
Q 037275 195 RNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELT 274 (992)
Q Consensus 195 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~ 274 (992)
++|+.|+|++|++++..+..|..+++|++|++++|++++ +| +..|..+++|++|+
T Consensus 157 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~------------------------~~~~~~l~~L~~L~ 211 (270)
T 2o6q_A 157 TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR-VP------------------------EGAFDSLEKLKMLQ 211 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC-CC------------------------TTTTTTCTTCCEEE
T ss_pred cccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCc-CC------------------------HHHhccccCCCEEE
Confidence 888888888888887666668888888888888887762 22 33456667777777
Q ss_pred ecccccc
Q 037275 275 LFDNQFR 281 (992)
Q Consensus 275 L~~N~l~ 281 (992)
|++|.+.
T Consensus 212 l~~N~~~ 218 (270)
T 2o6q_A 212 LQENPWD 218 (270)
T ss_dssp CCSSCBC
T ss_pred ecCCCee
Confidence 7777765
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.7e-24 Score=231.32 Aligned_cols=206 Identities=24% Similarity=0.308 Sum_probs=160.1
Q ss_pred ceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccC
Q 037275 349 MTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSS 428 (992)
Q Consensus 349 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 428 (992)
.+.+++++++++. +|..+. +++++|+|++|++++..+..|..+++|++|+|++|+++...+..|..+++|++|+|++
T Consensus 18 ~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 4556666666663 444333 4677888888888766666777788888888888888766566667788888888888
Q ss_pred CcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccC
Q 037275 429 NDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEI 508 (992)
Q Consensus 429 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 508 (992)
|++++..+..|..+++|++|++++ |.+++..+..|..+++|++|+|++|++++..
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~-------------------------n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDR-------------------------NQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCS-------------------------SCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CcCCcCCHhHcccccCCCEEECCC-------------------------CccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 888766666677777777774444 4444455566778889999999999998777
Q ss_pred CcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 509 PVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 509 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|++++|+|.|.++.
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 77788999999999999999977777889999999999999999977777788899999999999999988864
No 326
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=5.6e-25 Score=236.98 Aligned_cols=202 Identities=22% Similarity=0.240 Sum_probs=119.8
Q ss_pred cceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceecc
Q 037275 348 TMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALS 427 (992)
Q Consensus 348 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 427 (992)
+++++++++|+++. +|..+. ++++.|+|++|++++..+..|..+++|+.|+|++|+|++..+. ..+++|++|+|+
T Consensus 11 ~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls 85 (290)
T 1p9a_G 11 SHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLS 85 (290)
T ss_dssp TCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECC
T ss_pred CccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECC
Confidence 35666666666663 333332 4566666666666655556666666666666666666643222 556666666666
Q ss_pred CCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeeccccccc
Q 037275 428 SNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGE 507 (992)
Q Consensus 428 ~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 507 (992)
+|+|+ .+|..+..+++|++| ++++|++++..+..|..+++|++|+|++|++++.
T Consensus 86 ~N~l~-~l~~~~~~l~~L~~L-------------------------~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~ 139 (290)
T 1p9a_G 86 HNQLQ-SLPLLGQTLPALTVL-------------------------DVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139 (290)
T ss_dssp SSCCS-SCCCCTTTCTTCCEE-------------------------ECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCC
T ss_pred CCcCC-cCchhhccCCCCCEE-------------------------ECCCCcCcccCHHHHcCCCCCCEEECCCCCCCcc
Confidence 66666 455555555555555 3333333333445566666666666666666655
Q ss_pred CCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCC
Q 037275 508 IPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVP 581 (992)
Q Consensus 508 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 581 (992)
.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|+|.|.|.
T Consensus 140 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 140 PPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred ChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 5555666666666666666666544455566666666666666666 455555555666666666666666553
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1e-24 Score=234.23 Aligned_cols=224 Identities=21% Similarity=0.185 Sum_probs=189.0
Q ss_pred EeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCccc
Q 037275 353 VIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQ 432 (992)
Q Consensus 353 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 432 (992)
+..+.+++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|++++|+++
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 33444444 3455443 57999999999999777779999999999999999999888888999999999999999999
Q ss_pred CCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeeccccccc-CCcc
Q 037275 433 GSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGE-IPVT 511 (992)
Q Consensus 433 ~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~ 511 (992)
+..+..|..+++|++|++++|++ ++..+..+..+++|++|++++|++++. +|..
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l-------------------------~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~ 144 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNL-------------------------ASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCC-------------------------CCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred ccChhhhcCCccccEEECCCCCc-------------------------cccCchhcccCCCCCEEECcCCccceecCchh
Confidence 88888899999999885555554 444455688999999999999999874 5899
Q ss_pred cccccccceeeccCCcccccCCccccccCCCC----EEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCC-Ccc
Q 037275 512 LSACTSLQQLYLQGNSFSGSIPSSLSSLKSIK----ELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTK-GVF 586 (992)
Q Consensus 512 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~ 586 (992)
|..+++|+.|+|++|++++..+..|..+++|+ .|++++|++++..+..+. ..+|+.|++++|.+++.++.. ..+
T Consensus 145 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l 223 (276)
T 2z62_A 145 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRL 223 (276)
T ss_dssp GGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTC
T ss_pred hccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhccc
Confidence 99999999999999999988888899888888 999999999976665554 458999999999999877653 567
Q ss_pred CCcccccccCCCCcCCCCC
Q 037275 587 SNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 587 ~~~~~~~l~~N~~~C~~~~ 605 (992)
+.++.+++.+|++.|+|+.
T Consensus 224 ~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 224 TSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CSCCEEECCSSCBCCCTTT
T ss_pred ccccEEEccCCcccccCCc
Confidence 8899999999999998864
No 328
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=8.1e-28 Score=289.06 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=70.0
Q ss_pred cccCCCCccEEeeecccccccCCccccc-ccccceeeccCCcccccCCccc-cccCCCCEEECCCcccCCCChh-hhhcC
Q 037275 487 EVGNLKNLVYFNISVNRFSGEIPVTLSA-CTSLQQLYLQGNSFSGSIPSSL-SSLKSIKELDMSSNNLSGQIPE-YLENL 563 (992)
Q Consensus 487 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l 563 (992)
.+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ .++++|++|+|++|.+++.... ....+
T Consensus 427 l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l 505 (594)
T 2p1m_B 427 IVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKL 505 (594)
T ss_dssp HHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGG
T ss_pred HHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhC
Confidence 366788999999987 676655555655 7889999999999876555555 6689999999999999654443 34568
Q ss_pred CCcceEecCCCcCc
Q 037275 564 SFLEYLNLSYNHFE 577 (992)
Q Consensus 564 ~~L~~L~l~~N~l~ 577 (992)
++|++|++++|+++
T Consensus 506 ~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 506 ETMRSLWMSSCSVS 519 (594)
T ss_dssp GGSSEEEEESSCCB
T ss_pred CCCCEEeeeCCCCC
Confidence 99999999999884
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=5.3e-24 Score=229.38 Aligned_cols=206 Identities=26% Similarity=0.278 Sum_probs=116.1
Q ss_pred ccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCcccccccc
Q 037275 367 IRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLI 446 (992)
Q Consensus 367 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 446 (992)
++++++++++++++|.++ .+|..+. ++++.|+|++|+|++..+..|..+++|+.|+|++|.|++..+ . ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCC
Confidence 344555666666666665 3343332 456666666666665555556666666666666666653222 1 4455555
Q ss_pred ccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCC
Q 037275 447 ELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGN 526 (992)
Q Consensus 447 ~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 526 (992)
+|++++|++ + .+|..+..+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 81 ~L~Ls~N~l-------------------------~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 81 TLDLSHNQL-------------------------Q-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp EEECCSSCC-------------------------S-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred EEECCCCcC-------------------------C-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 553333332 2 34445555666666666666666555555666666666666666
Q ss_pred cccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCCccCCcccccccCCCCcCCC
Q 037275 527 SFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGVFSNKTGISLSGNGKVCGG 603 (992)
Q Consensus 527 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N~~~C~~ 603 (992)
+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+++..++.......++.+.+.+|||.|+|
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 66655555556666666666666666654445555566666666666666654444444445555666666666655
No 330
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=1.5e-24 Score=253.31 Aligned_cols=193 Identities=18% Similarity=0.172 Sum_probs=141.4
Q ss_pred CCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCC--------chhHHHHHHHHHHhccCCcceeEEEEeeccccc
Q 037275 680 DFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKG--------ASNGFVAECQALRNIRHRNLIKIITICSSIDFK 751 (992)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 751 (992)
.+...++||+|+||+||+|+. .++.+|+|+....... ..+++.+|++++++++||||+++..++..
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~---- 410 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD---- 410 (540)
T ss_dssp -----------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE----
T ss_pred cCCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe----
Confidence 334567999999999999965 5788999986433221 12457899999999999999944443322
Q ss_pred CcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEE
Q 037275 752 GVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHL 831 (992)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 831 (992)
....++||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. .+||
T Consensus 411 -~~~~~lVmE~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL 470 (540)
T 3en9_A 411 -LDNKRIMMSYINGKLAKDVIED--------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYI 470 (540)
T ss_dssp -TTTTEEEEECCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEE
T ss_pred -CCccEEEEECCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEE
Confidence 2234999999999999999874 457899999999999999 9999999999999998 9999
Q ss_pred eecccceecCCCCCCCCcccCCCCCcccccccccccccccC--CCcCcccchhhHHHHHHHHHhCCCCCC
Q 037275 832 GDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG--GEASMTGDVYSFGILLLEMFTRRRPTD 899 (992)
Q Consensus 832 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~pf~ 899 (992)
+|||+|+......... ...........||+.|||||++.. ..|+..+|+||.++-..+-+.++.+|.
T Consensus 471 ~DFGla~~~~~~~~~~-~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 471 IDFGLGKISNLDEDKA-VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCCTTCEECCCHHHHH-HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred EECccCEECCCccccc-cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 9999999765321000 000001234579999999999887 568888999999999999888877763
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.4e-23 Score=221.50 Aligned_cols=193 Identities=18% Similarity=0.232 Sum_probs=168.8
Q ss_pred CCCCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCC
Q 037275 35 TNLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKI 114 (992)
Q Consensus 35 ~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 114 (992)
++||.|.|++|... .+.+|++++.+ ..+|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|++++..
T Consensus 2 ~~Cp~~~gC~C~~~---~~~l~~~~~~l-~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 75 (251)
T 3m19_A 2 KTCETVTGCTCNEG---KKEVDCQGKSL-DSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75 (251)
T ss_dssp --CHHHHSSEEEGG---GTEEECTTCCC-SSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred ccCCCCCceEcCCC---CeEEecCCCCc-cccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC
Confidence 46899999999543 34689999998 57787765 68999999999999878888999999999999999999877
Q ss_pred CcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCC
Q 037275 115 PTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNL 194 (992)
Q Consensus 115 p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 194 (992)
|..+..+++|++|++++|+++ .+|...+..+++|++|+|++|.+++..+..|.++++|++|+|++|++.+..+..|..+
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred HhHhccCCcCCEEECCCCccc-ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcC
Confidence 888999999999999999998 6777766789999999999999997777778999999999999999977777789999
Q ss_pred CcccEEeccCcccccccCccccccCCCcEEeccCCccCCC
Q 037275 195 RNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGS 234 (992)
Q Consensus 195 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 234 (992)
++|++|+|++|++++..+..+..+++|++|++++|.+.+.
T Consensus 155 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 155 TNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999999999977777889999999999999998754
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=6.9e-24 Score=226.78 Aligned_cols=181 Identities=25% Similarity=0.243 Sum_probs=115.7
Q ss_pred cCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccc
Q 037275 368 RNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIE 447 (992)
Q Consensus 368 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 447 (992)
..+++|++|++++|.+++. ..+..+++|++|+|++|++++..+..|..+++|++|++++|++++..+..|..+++|++
T Consensus 60 ~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 137 (272)
T 3rfs_A 60 QYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137 (272)
T ss_dssp GGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCE
Confidence 3444555555555555431 24555555555555555555555555555666666666666666555555555666655
Q ss_pred cccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCc
Q 037275 448 LHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNS 527 (992)
Q Consensus 448 L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 527 (992)
|++++| .+++..+..+..+++|++|++++|++++..+..|..+++|+.|+|++|+
T Consensus 138 L~L~~n-------------------------~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 138 LNLAHN-------------------------QLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EECCSS-------------------------CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCC-------------------------ccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 533333 3333334445666777777777777776666667777888888888888
Q ss_pred ccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 528 FSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 528 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
+++..+..|..+++|++|+|++|.+.+. +++|++|+++.|.++|.+|.
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 8877777778888888888888877643 44678888888888887775
No 333
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=1.3e-22 Score=216.93 Aligned_cols=202 Identities=19% Similarity=0.230 Sum_probs=158.7
Q ss_pred ccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCC
Q 037275 243 LPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCT 322 (992)
Q Consensus 243 ~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~ 322 (992)
+.++..+.+..+.+... ..+..+++|+.|++++|.++.. ..+..+++|++|+|++|.++.+ ..+..++
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--------~~l~~l~ 85 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--------SALKELT 85 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--------GGGTTCT
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--------hhhcCCC
Confidence 34555566666665544 2356788899999999988743 3478888999999999988763 2467788
Q ss_pred cceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEec
Q 037275 323 ELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYL 402 (992)
Q Consensus 323 ~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 402 (992)
+|+.|++++|++.+..+..+..+. +|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|++
T Consensus 86 ~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 86 NLTYLILTGNQLQSLPNGVFDKLT-NLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCT-TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccCccChhHhcCCc-CCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 888888888888877666666654 5888888888888887778888888899999888888777777888888899999
Q ss_pred cCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccc
Q 037275 403 DSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTG 457 (992)
Q Consensus 403 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 457 (992)
++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+.+
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9888887777778888888889998888888777778888888888777666553
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.7e-22 Score=211.65 Aligned_cols=181 Identities=23% Similarity=0.224 Sum_probs=126.4
Q ss_pred cccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccc
Q 037275 372 NLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMA 451 (992)
Q Consensus 372 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 451 (992)
+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.|++..+..|..+++|++|+++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455666666665 4444433 456666666666666666666666666666666666666566666666666666333
Q ss_pred cccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCccccc
Q 037275 452 DIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGS 531 (992)
Q Consensus 452 ~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 531 (992)
+ |++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++.
T Consensus 92 ~-------------------------n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 92 N-------------------------NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp T-------------------------SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred C-------------------------CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 3 333334445566777788888888888766666677888888888888888876
Q ss_pred CCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccC
Q 037275 532 IPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEV 580 (992)
Q Consensus 532 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 580 (992)
.+..|..+++|++|+|++|+|++..+..|..+++|++|++++|+|+|.+
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 6667888888888888888888777777888888888888888888763
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=4.8e-23 Score=224.92 Aligned_cols=200 Identities=18% Similarity=0.211 Sum_probs=148.5
Q ss_pred cceeEEeeCCccccccCCCc--cCCCcccEEEccCCcCCCCCC----ccccCCCCCcEEeccCccccccCCCCCCCcccc
Q 037275 348 TMTDIVIAGNQISGIIPTGI--RNLVNLVELCMDDNKLTGTIP----HAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLL 421 (992)
Q Consensus 348 ~L~~L~l~~n~i~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 421 (992)
+|++|++++|++++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++++..+..|..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 37777777777777777777 778888888888888876544 344567788888888888887777788888888
Q ss_pred CceeccCCcccCC--C--CCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccc----cccCCCC
Q 037275 422 TNLALSSNDLQGS--I--PPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPL----EVGNLKN 493 (992)
Q Consensus 422 ~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~----~~~~l~~ 493 (992)
++|+|++|++.+. + +..+..+++|++|++++|+++ .++. .++.+++
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~--------------------------~l~~~~~~l~~~l~~ 225 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME--------------------------TPTGVCAALAAAGVQ 225 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC--------------------------CHHHHHHHHHHHTCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC--------------------------chHHHHHHHHhcCCC
Confidence 8888888887531 1 233467777877766666554 1222 2467788
Q ss_pred ccEEeeecccccccCCcccccc---cccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEe
Q 037275 494 LVYFNISVNRFSGEIPVTLSAC---TSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLN 570 (992)
Q Consensus 494 L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 570 (992)
|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+
T Consensus 226 L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~ 300 (310)
T 4glp_A 226 PHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLT 300 (310)
T ss_dssp CSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEE
T ss_pred CCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEE
Confidence 8888888888887767777666 58888888888888 5676664 7888888888888854 33 67788888888
Q ss_pred cCCCcCcc
Q 037275 571 LSYNHFEG 578 (992)
Q Consensus 571 l~~N~l~~ 578 (992)
+++|+|+.
T Consensus 301 L~~N~l~~ 308 (310)
T 4glp_A 301 LDGNPFLV 308 (310)
T ss_dssp CSSTTTSC
T ss_pred CcCCCCCC
Confidence 88888863
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.9e-24 Score=240.05 Aligned_cols=86 Identities=15% Similarity=0.051 Sum_probs=56.0
Q ss_pred eeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCC----cccccCC-CCcEeecccccccccCChhhccc----ccc
Q 037275 78 YLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIP----TNLSRCS-NLISFNARRNNLVGEIPAELGYN----WLK 148 (992)
Q Consensus 78 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~-~L~~L~l~~n~l~~~~p~~~~~~----l~~ 148 (992)
+++|++|+++|.+|..+...++|++|+|++|++++..+ ..+..++ +|++|++++|++++..+..+... .++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788888888778777777778888888888875554 5566666 77777777777775555444321 144
Q ss_pred cccccccccccCCCC
Q 037275 149 LENLTIADNHLTGHF 163 (992)
Q Consensus 149 L~~L~L~~n~l~~~~ 163 (992)
|++|+|++|.+++..
T Consensus 82 L~~L~Ls~n~l~~~~ 96 (362)
T 3goz_A 82 VTSLNLSGNFLSYKS 96 (362)
T ss_dssp CCEEECCSSCGGGSC
T ss_pred ccEEECcCCcCChHH
Confidence 555555555544333
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=2.7e-24 Score=240.41 Aligned_cols=268 Identities=18% Similarity=0.164 Sum_probs=196.3
Q ss_pred eeccccccCCccCCCCCCCCcCCeeeccCCCCCccCC----ccccCCC-CCCEEEeecccCCCCCCcccccC-----CCC
Q 037275 55 LDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIP----HQIGRLV-RLEALVLANNSFSGKIPTNLSRC-----SNL 124 (992)
Q Consensus 55 ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l-----~~L 124 (992)
.+|+.+.+.+.+|..+...++|++|||++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5788899999999888888889999999999996665 7788898 99999999999998878888876 999
Q ss_pred cEeecccccccccCChhhccc---c-cccccccccccccCCCCCCcccc-----ccccceEEecCCcccCC----cCCcc
Q 037275 125 ISFNARRNNLVGEIPAELGYN---W-LKLENLTIADNHLTGHFPASIGN-----LSTLERINVLGNGLWGR----IPNNL 191 (992)
Q Consensus 125 ~~L~l~~n~l~~~~p~~~~~~---l-~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~l~~n~l~~~----~~~~l 191 (992)
++|++++|++++..+..++.. + ++|++|+|++|.+++..+..+.. .++|++|++++|.+.+. ++..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 999999999997777655432 2 78999999999998766655443 36899999999988643 33334
Q ss_pred CCCC-cccEEeccCcccccccCccccc----c-CCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhh
Q 037275 192 GNLR-NLILLNLGENRFSGIVPPSIFN----I-SSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLS 265 (992)
Q Consensus 192 ~~l~-~L~~L~L~~n~l~~~~p~~l~~----l-~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~ 265 (992)
..++ +|++|+|++|++++..+..+.. + ++|++|+|++|.+.+.... .++..+.
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~---------------------~l~~~l~ 221 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYA---------------------ELAYIFS 221 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH---------------------HHHHHHH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH---------------------HHHHHHh
Confidence 5554 8999999999888665554443 3 5888888888887732111 2344555
Q ss_pred cc-ccCceeeecccccccccc----ccccccCccceEecCCCCCCCCCCCCch-hhhhccCCCcceEeecCCCcCCCcCC
Q 037275 266 NA-SNLVELTLFDNQFRGKVS----IYFRSLKNLEWLNLGSNNLGTGEANDLD-FLTLLTNCTELTAIGLDDNRFGGVLP 339 (992)
Q Consensus 266 ~l-~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~l~~~~~L~~L~l~~n~l~~~~~ 339 (992)
.+ ++|++|+|++|.+++..+ ..+..+++|++|+|++|.+..+....+. ....+..+++|+.|++++|++....+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 53 478888888888776544 3345667788888888876555543222 22345667777788888887776544
Q ss_pred cccc
Q 037275 340 HSIA 343 (992)
Q Consensus 340 ~~~~ 343 (992)
..+.
T Consensus 302 ~~~~ 305 (362)
T 3goz_A 302 IPIS 305 (362)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.7e-22 Score=211.64 Aligned_cols=200 Identities=18% Similarity=0.213 Sum_probs=135.1
Q ss_pred ccceeEEeeCCccccccCCCccCCCcccEEEccCCc-CCCCCCccccCCCCCcEEeccC-ccccccCCCCCCCccccCce
Q 037275 347 STMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNK-LTGTIPHAIGELKNLQLLYLDS-NFLAGGIPTSLGNLTLLTNL 424 (992)
Q Consensus 347 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 424 (992)
..+++|++++|+++++.+..|.++++|++|++++|+ ++++.+..|..+++|++|++++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 357777888888877777777788888888888886 7756666777788888888887 77776666677777778888
Q ss_pred eccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccc-cccCcccccccCCCCcc-EEeeecc
Q 037275 425 ALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYN-LLSGTLPLEVGNLKNLV-YFNISVN 502 (992)
Q Consensus 425 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N-~l~~~~~~~~~~l~~L~-~L~Ls~N 502 (992)
++++|++++ +|. |..+++|+.| ..|++++| .+++..+..|..+++|+ +|++++|
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L----------------------~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIF----------------------FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSE----------------------EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC
T ss_pred eCCCCCCcc-ccc-cccccccccc----------------------cEEECCCCcchhhcCcccccchhcceeEEEcCCC
Confidence 888887774 554 6666666511 12244455 45444445566777777 7777777
Q ss_pred cccccCCcccccccccceeeccCCc-ccccCCcccccc-CCCCEEECCCcccCCCChhhhhcCCCcceEecCCC
Q 037275 503 RFSGEIPVTLSACTSLQQLYLQGNS-FSGSIPSSLSSL-KSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYN 574 (992)
Q Consensus 503 ~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 574 (992)
+++.+.+..|.. ++|+.|+|++|+ +++..+..|.++ ++|+.|+|++|+|++. |.. .+++|+.|+++++
T Consensus 167 ~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 167 GFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 777444444444 677777777774 776556667777 7777777777777643 332 4566777777655
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.4e-24 Score=238.75 Aligned_cols=273 Identities=18% Similarity=0.202 Sum_probs=141.1
Q ss_pred CCCCCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCC--CcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCC
Q 037275 34 STNLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNL--SFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFS 111 (992)
Q Consensus 34 ~~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 111 (992)
+.-|.+|.++.|+. ..++.+|++++.+. +..+..+ ++++.|++++|.+.+..|. +..+++|++|+|++|.++
T Consensus 33 ~~vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~ 106 (336)
T 2ast_B 33 SGVCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIE 106 (336)
T ss_dssp TSSCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEEC
T ss_pred HHHHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcC
Confidence 44556899998853 34567777777654 3445555 6677777777777654443 556677777777777666
Q ss_pred CC-CCcccccCCCCcEeecccccccccCChhhccccccccccccccc-ccCCCCCCccccccccceEEecCCcccCCcCC
Q 037275 112 GK-IPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADN-HLTGHFPASIGNLSTLERINVLGNGLWGRIPN 189 (992)
Q Consensus 112 ~~-~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 189 (992)
+. +|..+..+++|++|++++|++++..|..+. .+++|++|+|++| .+++. .++.
T Consensus 107 ~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~-~~~~L~~L~L~~~~~l~~~-----------------------~l~~ 162 (336)
T 2ast_B 107 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLA-KNSNLVRLNLSGCSGFSEF-----------------------ALQT 162 (336)
T ss_dssp HHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHT-TCTTCSEEECTTCBSCCHH-----------------------HHHH
T ss_pred HHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHh-cCCCCCEEECCCCCCCCHH-----------------------HHHH
Confidence 44 555666666666666666665544444443 3455555555554 33321 1333
Q ss_pred ccCCCCcccEEeccCc-ccccc-cCccccccC-CCcEEeccCCc--cCCCCCccccccccccchhhccccccCCCCchhh
Q 037275 190 NLGNLRNLILLNLGEN-RFSGI-VPPSIFNIS-SLENVFLPTNR--FNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESL 264 (992)
Q Consensus 190 ~l~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~-~L~~L~l~~N~--l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l 264 (992)
.+.++++|++|+|++| .+++. ++..+..++ +|++|++++|. ++. +.+|..+
T Consensus 163 ~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~------------------------~~l~~~~ 218 (336)
T 2ast_B 163 LLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQK------------------------SDLSTLV 218 (336)
T ss_dssp HHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCH------------------------HHHHHHH
T ss_pred HHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCH------------------------HHHHHHH
Confidence 3444555555555555 55432 344445555 55555555552 210 0123333
Q ss_pred hccccCceeeecccc-ccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcccc
Q 037275 265 SNASNLVELTLFDNQ-FRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHSIA 343 (992)
Q Consensus 265 ~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~ 343 (992)
..+++|++|++++|. +++..+..+..+++|++|+|++|. .+.. ..+..+..+++|+.|++++| +. ...+.
T Consensus 219 ~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~---~~~~~l~~~~~L~~L~l~~~-i~---~~~~~ 289 (336)
T 2ast_B 219 RRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIP---ETLLELGEIPTLKTLQVFGI-VP---DGTLQ 289 (336)
T ss_dssp HHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCG---GGGGGGGGCTTCCEEECTTS-SC---TTCHH
T ss_pred hhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCH---HHHHHHhcCCCCCEEeccCc-cC---HHHHH
Confidence 444455555555554 443444444445555555555553 1111 11123344555555555555 21 11233
Q ss_pred cccccceeEEeeCCccccccCCCccC
Q 037275 344 NLSSTMTDIVIAGNQISGIIPTGIRN 369 (992)
Q Consensus 344 ~l~~~L~~L~l~~n~i~~~~~~~~~~ 369 (992)
.+...+..|++++|++++..|..+++
T Consensus 290 ~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 290 LLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp HHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred HHHhhCcceEEecccCccccCCcccc
Confidence 33334555666666666666655553
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=1.3e-22 Score=221.63 Aligned_cols=226 Identities=17% Similarity=0.132 Sum_probs=146.2
Q ss_pred cCCeeeccCCCCCcc-CCc--cccCCCCCCEEEeecccCCCCCCccc--ccCCCCcEeecccccccccCC----hhhccc
Q 037275 75 FLRYLNLADNNFHGE-IPH--QIGRLVRLEALVLANNSFSGKIPTNL--SRCSNLISFNARRNNLVGEIP----AELGYN 145 (992)
Q Consensus 75 ~L~~L~L~~n~l~~~-~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~l~~n~l~~~~p----~~~~~~ 145 (992)
.++.|.+.++.+... +.. .+..+++|++|+|++|++++..|..+ +.+++|++|++++|++++..+ ..+. .
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~-~ 143 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW-L 143 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT-B
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh-h
Confidence 467788888777632 111 12345679999999999988888887 888899999999998886555 2223 5
Q ss_pred ccccccccccccccCCCCCCccccccccceEEecCCcccCC--c--CCccCCCCcccEEeccCcccccccCc----cccc
Q 037275 146 WLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGR--I--PNNLGNLRNLILLNLGENRFSGIVPP----SIFN 217 (992)
Q Consensus 146 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~--~--~~~l~~l~~L~~L~L~~n~l~~~~p~----~l~~ 217 (992)
+++|++|+|++|.+++..|..++++++|++|++++|++.+. + +..++.+++|++|+|++|+++. ++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 77888888888888877777888888888888888886442 2 2234677888888888888862 232 2456
Q ss_pred cCCCcEEeccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceE
Q 037275 218 ISSLENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWL 297 (992)
Q Consensus 218 l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 297 (992)
+++|++|+|++|++.+..|..++... .+++|++|+|++|+|+.. |..+. ++|++|
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~----------------------~~~~L~~L~Ls~N~l~~l-p~~~~--~~L~~L 277 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCM----------------------WSSALNSLNLSFAGLEQV-PKGLP--AKLRVL 277 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCC----------------------CCTTCCCEECCSSCCCSC-CSCCC--SCCSCE
T ss_pred CCCCCEEECCCCCCCccchhhHHhcc----------------------CcCcCCEEECCCCCCCch-hhhhc--CCCCEE
Confidence 77888888888877755454332211 113555555555555532 32222 455555
Q ss_pred ecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCC
Q 037275 298 NLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFG 335 (992)
Q Consensus 298 ~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~ 335 (992)
+|++|+++.++. +..+++|+.|++++|+++
T Consensus 278 ~Ls~N~l~~~~~--------~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 278 DLSSNRLNRAPQ--------PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp ECCSCCCCSCCC--------TTSCCCCSCEECSSTTTS
T ss_pred ECCCCcCCCCch--------hhhCCCccEEECcCCCCC
Confidence 555555554321 234455556666666554
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=2.1e-22 Score=210.99 Aligned_cols=206 Identities=16% Similarity=0.159 Sum_probs=172.7
Q ss_pred cccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCcc-ccccCCCCCCCccccCceeccC-CcccCCCC
Q 037275 359 ISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNF-LAGGIPTSLGNLTLLTNLALSS-NDLQGSIP 436 (992)
Q Consensus 359 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~ 436 (992)
++ .+|. +. .+|++|++++|++++..+..|..+++|++|++++|+ +++..+..|.++++|++|++++ |++++..+
T Consensus 23 l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~ 98 (239)
T 2xwt_C 23 IQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP 98 (239)
T ss_dssp CS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT
T ss_pred cc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH
Confidence 44 3455 43 389999999999997777799999999999999997 8877777899999999999998 99997777
Q ss_pred CCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCcc---EEeeecc-cccccCCccc
Q 037275 437 PSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLV---YFNISVN-RFSGEIPVTL 512 (992)
Q Consensus 437 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~ 512 (992)
..|..+++|++|++++|+++ .+|. |..+++|+ +|++++| ++++..+..|
T Consensus 99 ~~f~~l~~L~~L~l~~n~l~--------------------------~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~ 151 (239)
T 2xwt_C 99 DALKELPLLKFLGIFNTGLK--------------------------MFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAF 151 (239)
T ss_dssp TSEECCTTCCEEEEEEECCC--------------------------SCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTT
T ss_pred HHhCCCCCCCEEeCCCCCCc--------------------------cccc-cccccccccccEEECCCCcchhhcCcccc
Confidence 88999999999866666555 2444 66777777 9999999 9998888889
Q ss_pred ccccccc-eeeccCCcccccCCccccccCCCCEEECCCcc-cCCCChhhhhcC-CCcceEecCCCcCcccCCCCCccCCc
Q 037275 513 SACTSLQ-QLYLQGNSFSGSIPSSLSSLKSIKELDMSSNN-LSGQIPEYLENL-SFLEYLNLSYNHFEGEVPTKGVFSNK 589 (992)
Q Consensus 513 ~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~~~~ 589 (992)
.++++|+ +|++++|+++...+..|.. ++|++|+|++|+ +++..+..|..+ ++|+.|++++|++++.++. .++.+
T Consensus 152 ~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L 228 (239)
T 2xwt_C 152 QGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHL 228 (239)
T ss_dssp TTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTC
T ss_pred cchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccC
Confidence 9999999 9999999999544445555 899999999995 997778889999 9999999999999976654 68888
Q ss_pred ccccccCCC
Q 037275 590 TGISLSGNG 598 (992)
Q Consensus 590 ~~~~l~~N~ 598 (992)
+.+.+.++.
T Consensus 229 ~~L~l~~~~ 237 (239)
T 2xwt_C 229 KELIARNTW 237 (239)
T ss_dssp SEEECTTC-
T ss_pred ceeeccCcc
Confidence 888887653
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=2.7e-24 Score=243.00 Aligned_cols=258 Identities=18% Similarity=0.250 Sum_probs=176.3
Q ss_pred CCchhhhccccCceeeecccccccccccc----ccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcC
Q 037275 259 SIPESLSNASNLVELTLFDNQFRGKVSIY----FRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRF 334 (992)
Q Consensus 259 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l 334 (992)
.++..+..+++|++|+|++|.+++..+.. |..+++|++|+|++|.+.. +
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~---------------------------l 75 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGR---------------------------V 75 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTS---------------------------C
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCc---------------------------c
Confidence 45667888888888888888888664433 5567777777777765543 2
Q ss_pred CCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCC----CCCccccCCCCCcEEeccCcccccc
Q 037275 335 GGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTG----TIPHAIGELKNLQLLYLDSNFLAGG 410 (992)
Q Consensus 335 ~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~ 410 (992)
.+.+|..+..+ ...+..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++.
T Consensus 76 ~~~~~~~~~~l------------------~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~ 137 (386)
T 2ca6_A 76 KDEIPEALRLL------------------LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQ 137 (386)
T ss_dssp GGGSHHHHHHH------------------HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHH
T ss_pred ccchhHHHHHH------------------HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHH
Confidence 22333332211 1234566777788888887775 3566677777888888888877643
Q ss_pred CCCCCC----Cc---------cccCceeccCCccc-CCCC---CCccccccccccccccccccccCchhhhhhccccccc
Q 037275 411 IPTSLG----NL---------TLLTNLALSSNDLQ-GSIP---PSLGNCKNLIELHMADIELTGALPPQILSISTLSLSL 473 (992)
Q Consensus 411 ~~~~~~----~l---------~~L~~L~L~~N~l~-~~~~---~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L 473 (992)
.+..+. .+ ++|++|+|++|+++ ..++ ..+..+++|+.|++++|+++..
T Consensus 138 ~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~--------------- 202 (386)
T 2ca6_A 138 AGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE--------------- 202 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHH---------------
T ss_pred HHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHh---------------
Confidence 332222 23 67777788777776 2233 2455666677666555554410
Q ss_pred ccccccccCcccccccCCCCccEEeeeccccc----ccCCcccccccccceeeccCCccccc----CCccc--cccCCCC
Q 037275 474 DLSYNLLSGTLPLEVGNLKNLVYFNISVNRFS----GEIPVTLSACTSLQQLYLQGNSFSGS----IPSSL--SSLKSIK 543 (992)
Q Consensus 474 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~--~~l~~L~ 543 (992)
.+....+..+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|+|++. ++..+ +.+++|+
T Consensus 203 -----g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~ 277 (386)
T 2ca6_A 203 -----GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQ 277 (386)
T ss_dssp -----HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCC
T ss_pred -----HHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeE
Confidence 000023346778889999999999986 56778888899999999999999865 45666 3489999
Q ss_pred EEECCCcccCC----CChhhh-hcCCCcceEecCCCcCcccCC
Q 037275 544 ELDMSSNNLSG----QIPEYL-ENLSFLEYLNLSYNHFEGEVP 581 (992)
Q Consensus 544 ~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~l~~N~l~~~~~ 581 (992)
+|+|++|+|++ .+|..+ .++++|++|++++|++++..+
T Consensus 278 ~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 278 TLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp EEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred EEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 99999999986 477777 668999999999999886543
No 343
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.6e-22 Score=233.97 Aligned_cols=208 Identities=21% Similarity=0.282 Sum_probs=139.0
Q ss_pred CCCCcCCCCCC-----ceEee-EEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCC
Q 037275 28 TSSWNNSTNLC-----QWTGV-TCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLE 101 (992)
Q Consensus 28 ~~~w~~~~~~c-----~w~gv-~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 101 (992)
+.+|..+.++| .|.|+ +|.. .+++.|||+++.+.+ +|+.+. ++|++|+|++|+++ .+| ..+++|+
T Consensus 33 l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCC
Confidence 45677677788 79999 7853 358888898888865 777663 78888888888888 677 4578888
Q ss_pred EEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCC
Q 037275 102 ALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGN 181 (992)
Q Consensus 102 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n 181 (992)
+|+|++|+|++ +|. +.. +|++|++++|++++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N 170 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNN 170 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCC
Confidence 88888888884 777 554 78888888887774 665 35667777777777764 554 4566666666666
Q ss_pred cccCCcCCccCCCCcccEEeccCcccccccCccccccCCC-------cEEeccCCccCCCCCccccccccccchhhcccc
Q 037275 182 GLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSL-------ENVFLPTNRFNGSLPLDIGVSLPKLLGFIVAEN 254 (992)
Q Consensus 182 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L-------~~L~l~~N~l~~~~~~~~~~~~~~L~~l~l~~n 254 (992)
.+.+ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+
T Consensus 171 ~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~---------------------- 220 (571)
T 3cvr_A 171 QLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT---------------------- 220 (571)
T ss_dssp CCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC----------------------
T ss_pred CCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce----------------------
Confidence 6644 555 44 66666666666666 4454 333 44 44555444444
Q ss_pred ccCCCCchhhhccccCceeeecccccccccccccccc
Q 037275 255 NFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSL 291 (992)
Q Consensus 255 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 291 (992)
.+|..+..+++|++|+|++|.+++..|..|..+
T Consensus 221 ----~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 221 ----HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp ----CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred ----ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 345555556666666666666666665555443
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=9.8e-23 Score=225.76 Aligned_cols=254 Identities=18% Similarity=0.245 Sum_probs=179.4
Q ss_pred CCEEEeecccCCCCCCcccccC--CCCcEeecccccccccCChhhcccccccccccccccccCCC-CCCccccccccceE
Q 037275 100 LEALVLANNSFSGKIPTNLSRC--SNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGH-FPASIGNLSTLERI 176 (992)
Q Consensus 100 L~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L 176 (992)
++.|++++|.+. |..+..+ ++++.|++++|.+.+..+. ++ .+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~-~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HF-SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CC-CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hc-cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 344444444443 2333333 4444555555444433332 22 355566666666665543 56667778888888
Q ss_pred EecCCcccCCcCCccCCCCcccEEeccCc-ccccc-cCccccccCCCcEEeccCC-ccCCCCCccccccccccchhhccc
Q 037275 177 NVLGNGLWGRIPNNLGNLRNLILLNLGEN-RFSGI-VPPSIFNISSLENVFLPTN-RFNGSLPLDIGVSLPKLLGFIVAE 253 (992)
Q Consensus 177 ~l~~n~l~~~~~~~l~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~l~~N-~l~~~~~~~~~~~~~~L~~l~l~~ 253 (992)
++++|.+.+..+..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .+++.
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~------------------- 184 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK------------------- 184 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH-------------------
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH-------------------
Confidence 88888887778888899999999999999 68753 6777889999999999999 77621
Q ss_pred cccCCCCchhhhccc-cCceeeeccc--ccc-ccccccccccCccceEecCCCC-CCCCCCCCchhhhhccCCCcceEee
Q 037275 254 NNFAGSIPESLSNAS-NLVELTLFDN--QFR-GKVSIYFRSLKNLEWLNLGSNN-LGTGEANDLDFLTLLTNCTELTAIG 328 (992)
Q Consensus 254 n~l~~~~p~~l~~l~-~L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~l~~~~~L~~L~ 328 (992)
.++..+..++ +|++|++++| .++ +..+..+..+++|++|+|++|. ++.. .+..+..+++|+.|+
T Consensus 185 -----~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~------~~~~l~~l~~L~~L~ 253 (336)
T 2ast_B 185 -----HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKND------CFQEFFQLNYLQHLS 253 (336)
T ss_dssp -----HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGG------GGGGGGGCTTCCEEE
T ss_pred -----HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHH------HHHHHhCCCCCCEee
Confidence 1355678889 9999999999 455 4556778899999999999998 5542 344677889999999
Q ss_pred cCCCc-CCCcCCcccccccccceeEEeeCCccccccCCCccCC-CcccEEEccCCcCCCCCCccccC
Q 037275 329 LDDNR-FGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNL-VNLVELCMDDNKLTGTIPHAIGE 393 (992)
Q Consensus 329 l~~n~-l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~ 393 (992)
+++|. +.......+..+ ++|+.|++++| ++ ...+..+ ..+..|++++|++++..|..++.
T Consensus 254 l~~~~~~~~~~~~~l~~~-~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 254 LSRCYDIIPETLLELGEI-PTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CTTCTTCCGGGGGGGGGC-TTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCCCCCHHHHHHHhcC-CCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 99996 332222245554 46999999999 33 3345555 34888889999999999988775
No 345
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=6.1e-22 Score=211.62 Aligned_cols=162 Identities=18% Similarity=0.128 Sum_probs=123.9
Q ss_pred HHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC------------------CchhHHHHHHHHHHhccC
Q 037275 674 LSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK------------------GASNGFVAECQALRNIRH 735 (992)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h 735 (992)
+......|++.+.||+|+||.||+|.+ .+|+.||+|+++.... .....+.+|+.++++++|
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 334445677779999999999999999 6899999999963321 123568899999999985
Q ss_pred CcceeEEEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEecc
Q 037275 736 RNLIKIITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGD 815 (992)
Q Consensus 736 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 815 (992)
+++..+++. +..++||||+++|+|.+ +.. .....++.|++.||+|||++ +|+|||
T Consensus 164 ~~v~~~~~~---------~~~~lvmE~~~g~~L~~-l~~------------~~~~~i~~qi~~~l~~lH~~---giiHrD 218 (282)
T 1zar_A 164 LAVPKVYAW---------EGNAVLMELIDAKELYR-VRV------------ENPDEVLDMILEEVAKFYHR---GIVHGD 218 (282)
T ss_dssp SSSCCEEEE---------ETTEEEEECCCCEEGGG-CCC------------SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCcCeEEec---------cceEEEEEecCCCcHHH-cch------------hhHHHHHHHHHHHHHHHHHC---CCEeCC
Confidence 444443321 23489999999999988 421 12346999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccccccccccccC----------CCcCcccchhh
Q 037275 816 LKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTVGYIAPEYGMG----------GEASMTGDVYS 883 (992)
Q Consensus 816 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~DiwS 883 (992)
|||+||+++ ++.+||+|||+|+. +..|+|||++.. ..|...+|+|.
T Consensus 219 lkp~NILl~-~~~vkl~DFG~a~~---------------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 219 LSQYNVLVS-EEGIWIIDFPQSVE---------------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp CSTTSEEEE-TTEEEECCCTTCEE---------------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred CCHHHEEEE-CCcEEEEECCCCeE---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999999999 99999999999973 345789998653 34555566654
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=2.5e-21 Score=210.68 Aligned_cols=191 Identities=27% Similarity=0.402 Sum_probs=135.5
Q ss_pred ceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccC
Q 037275 349 MTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSS 428 (992)
Q Consensus 349 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 428 (992)
|++|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. + .+..+++|+.|++++
T Consensus 43 L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 43 ITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTS 116 (308)
T ss_dssp CCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTT
T ss_pred cCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCC
Confidence 44455555555432 2 46677778888888887774433 77777888888888887743 2 577777888888888
Q ss_pred CcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccC
Q 037275 429 NDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEI 508 (992)
Q Consensus 429 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 508 (992)
|++++ ++ .+..+++|++|++++|+++ +..+ +..+++|++|+|++|++++..
T Consensus 117 n~l~~-~~-~l~~l~~L~~L~l~~n~l~-------------------------~~~~--l~~l~~L~~L~l~~n~l~~~~ 167 (308)
T 1h6u_A 117 TQITD-VT-PLAGLSNLQVLYLDLNQIT-------------------------NISP--LAGLTNLQYLSIGNAQVSDLT 167 (308)
T ss_dssp SCCCC-CG-GGTTCTTCCEEECCSSCCC-------------------------CCGG--GGGCTTCCEEECCSSCCCCCG
T ss_pred CCCCC-ch-hhcCCCCCCEEECCCCccC-------------------------cCcc--ccCCCCccEEEccCCcCCCCh
Confidence 88775 33 2677777777755555444 2222 667788888888888888544
Q ss_pred CcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccC
Q 037275 509 PVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEV 580 (992)
Q Consensus 509 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 580 (992)
+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++++..| +..+++|+.|++++|++++.+
T Consensus 168 ~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 168 P--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp G--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred h--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCC
Confidence 3 7888888888888888885433 7888888888888888885543 778888888888888887643
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=2.7e-21 Score=214.74 Aligned_cols=242 Identities=19% Similarity=0.159 Sum_probs=149.5
Q ss_pred CceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCC-ccccCCCCCCEEEeecccCCCCCCc
Q 037275 38 CQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIP-HQIGRLVRLEALVLANNSFSGKIPT 116 (992)
Q Consensus 38 c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~p~ 116 (992)
|.|..|.|+. +++ ..+|..+ .+++++|+|++|+|+ .+| ..|.++++|++|+|++|++.+.+|.
T Consensus 9 C~~~~v~C~~------------~~L-t~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~ 72 (350)
T 4ay9_X 9 CSNRVFLCQE------------SKV-TEIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEA 72 (350)
T ss_dssp EETTEEEEES------------TTC-CSCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECT
T ss_pred eeCCEEEecC------------CCC-CccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccCh
Confidence 6777777743 334 3566655 357888888888888 455 4678888888888888887656654
Q ss_pred -ccccCCCCcE-eecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecC-CcccCCcCCccCC
Q 037275 117 -NLSRCSNLIS-FNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLG-NGLWGRIPNNLGN 193 (992)
Q Consensus 117 -~l~~l~~L~~-L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~ 193 (992)
.|.++++|+. +.++.|+++ .+|+..+..+++|++|++++|+++...+..+....++..|++.+ |.+....+..|..
T Consensus 73 ~~f~~L~~l~~~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 73 DVFSNLPKLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp TSBCSCTTCCEEEEEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred hHhhcchhhhhhhcccCCccc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 4567777664 445556666 55555555666777777777777655555555566666666654 3453333344555
Q ss_pred CC-cccEEeccCcccccccCccccccCCCcEEeccC-CccCCCCCccccccccccchhhccccccCCCCchhhhccccCc
Q 037275 194 LR-NLILLNLGENRFSGIVPPSIFNISSLENVFLPT-NRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLV 271 (992)
Q Consensus 194 l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~-N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~ 271 (992)
+. .++.|+|++|+|+ .+|...+...+|++|++++ |.++ .+| +..|..+++|+
T Consensus 152 ~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~------------------------~~~f~~l~~L~ 205 (350)
T 4ay9_X 152 LSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELP------------------------NDVFHGASGPV 205 (350)
T ss_dssp SBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCC------------------------TTTTTTEECCS
T ss_pred cchhhhhhcccccccc-CCChhhccccchhHHhhccCCccc-CCC------------------------HHHhccCcccc
Confidence 43 4666666666666 3444444445566666553 2232 222 34567777888
Q ss_pred eeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCC
Q 037275 272 ELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDN 332 (992)
Q Consensus 272 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n 332 (992)
+|+|++|+|+..++..|.++++|+.+++ ++++.++ .+.++++|+.++++++
T Consensus 206 ~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~lP--------~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 206 ILDISRTRIHSLPSYGLENLKKLRARST--YNLKKLP--------TLEKLVALMEASLTYP 256 (350)
T ss_dssp EEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCCCC--------CTTTCCSCCEEECSCH
T ss_pred hhhcCCCCcCccChhhhccchHhhhccC--CCcCcCC--------CchhCcChhhCcCCCC
Confidence 8888888888766666665555554443 3344433 3566777788877653
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=2.7e-21 Score=210.34 Aligned_cols=148 Identities=20% Similarity=0.324 Sum_probs=72.8
Q ss_pred CCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccccccccc
Q 037275 72 NLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLEN 151 (992)
Q Consensus 72 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~ 151 (992)
.+++|++|++++|.++ .+| .+..+++|++|+|++|+++ .+|. +..+++|++|++++|+++ .++ .+ ..+++|++
T Consensus 39 ~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~-~~~-~~-~~l~~L~~ 111 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLK-NVS-AI-AGLQSIKT 111 (308)
T ss_dssp HHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCS-CCG-GG-TTCTTCCE
T ss_pred HcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCC-Cch-hh-cCCCCCCE
Confidence 4556666666666665 344 4566666666666666665 3333 556666666666666555 222 12 23444555
Q ss_pred ccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCcc
Q 037275 152 LTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRF 231 (992)
Q Consensus 152 L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l 231 (992)
|++++|.+++ +| .+..+++|++|++++|.+.+..+ +..+++|+.|+|++|++++. +. +..+++|++|++++|++
T Consensus 112 L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 112 LDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCcc
Confidence 5555555443 22 14444444444444444432221 44444444444444444421 21 44444444444444444
Q ss_pred C
Q 037275 232 N 232 (992)
Q Consensus 232 ~ 232 (992)
+
T Consensus 186 ~ 186 (308)
T 1h6u_A 186 S 186 (308)
T ss_dssp C
T ss_pred C
Confidence 3
No 349
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=6.4e-23 Score=231.68 Aligned_cols=166 Identities=20% Similarity=0.238 Sum_probs=85.8
Q ss_pred cCCCCCCCCcCCeeeccCCCCCcc----CCccccCCCCCCEEEeecc---cCCCCCCccc-------ccCCCCcEeeccc
Q 037275 66 LSPYVGNLSFLRYLNLADNNFHGE----IPHQIGRLVRLEALVLANN---SFSGKIPTNL-------SRCSNLISFNARR 131 (992)
Q Consensus 66 l~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~n---~l~~~~p~~l-------~~l~~L~~L~l~~ 131 (992)
++..+..+++|++|+|++|.+.+. ++..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 444445555555555555555543 2233445555555555553 3333444433 4555555566655
Q ss_pred ccccc----cCChhhcccccccccccccccccCCCCCCccc----cc---------cccceEEecCCccc-CCcC---Cc
Q 037275 132 NNLVG----EIPAELGYNWLKLENLTIADNHLTGHFPASIG----NL---------STLERINVLGNGLW-GRIP---NN 190 (992)
Q Consensus 132 n~l~~----~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~l---------~~L~~L~l~~n~l~-~~~~---~~ 190 (992)
|.+.+ .+|..+. .+++|++|+|++|.+++..+..+. .+ ++|++|++++|++. +.++ ..
T Consensus 104 n~l~~~~~~~l~~~l~-~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLS-KHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp CCCCTTTHHHHHHHHH-HCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CcCCHHHHHHHHHHHH-hCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 55554 2333332 455555666665555433222222 22 56666666666664 2233 34
Q ss_pred cCCCCcccEEeccCcccc--c---ccCccccccCCCcEEeccCCccC
Q 037275 191 LGNLRNLILLNLGENRFS--G---IVPPSIFNISSLENVFLPTNRFN 232 (992)
Q Consensus 191 l~~l~~L~~L~L~~n~l~--~---~~p~~l~~l~~L~~L~l~~N~l~ 232 (992)
+..+++|++|+|++|+++ + ..|..+..+++|++|+|++|.++
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 555566666666666665 2 23335566666666666666653
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=6.9e-21 Score=211.48 Aligned_cols=241 Identities=19% Similarity=0.182 Sum_probs=182.7
Q ss_pred CeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCC-cccccCCCCcEeecccccccccCChhhccccccccc-ccc
Q 037275 77 RYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIP-TNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLEN-LTI 154 (992)
Q Consensus 77 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~-L~L 154 (992)
++++.++++++ ++|..+ .+++++|+|++|+|+ .+| ..|.++++|++|+|++|++.+.+|...+.+++++++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 56788999999 888877 368999999999998 565 468999999999999999987888888878887664 666
Q ss_pred cccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccC-cccccccCccccccC-CCcEEeccCCccC
Q 037275 155 ADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGE-NRFSGIVPPSIFNIS-SLENVFLPTNRFN 232 (992)
Q Consensus 155 ~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~l~~l~-~L~~L~l~~N~l~ 232 (992)
++|+++...|..|.++++|++|++++|++....+..+....++..|++.+ |++....+..|..+. .++.|++++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 77888877788888899999999999988766666677777788888865 567755455666654 5777888888776
Q ss_pred CCCCccccccccccchhhccccccCCCCchhhhccccCceeeec-cccccccccccccccCccceEecCCCCCCCCCCCC
Q 037275 233 GSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLF-DNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEAND 311 (992)
Q Consensus 233 ~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~-~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 311 (992)
.+|.......+|++|+++ +|.++.+++..|..+++|++|+|++|+|+.++...
T Consensus 168 --------------------------~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~ 221 (350)
T 4ay9_X 168 --------------------------EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG 221 (350)
T ss_dssp --------------------------EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS
T ss_pred --------------------------CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh
Confidence 233344456789999997 48888888889999999999999999999988643
Q ss_pred chhhhhccCCCcceEeecCCCcCCCcCCcccccccccceeEEeeCCc
Q 037275 312 LDFLTLLTNCTELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQ 358 (992)
Q Consensus 312 ~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~ 358 (992)
+.++++|+.+++ .--..+| .+..+. +|+.+++.++.
T Consensus 222 ------~~~L~~L~~l~~---~~l~~lP-~l~~l~-~L~~l~l~~~~ 257 (350)
T 4ay9_X 222 ------LENLKKLRARST---YNLKKLP-TLEKLV-ALMEASLTYPS 257 (350)
T ss_dssp ------CTTCCEEECTTC---TTCCCCC-CTTTCC-SCCEEECSCHH
T ss_pred ------hccchHhhhccC---CCcCcCC-CchhCc-ChhhCcCCCCc
Confidence 344444544443 3333455 344543 58888887653
No 351
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=2.3e-21 Score=199.59 Aligned_cols=125 Identities=18% Similarity=0.178 Sum_probs=95.7
Q ss_pred cccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhc
Q 037275 483 TLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLEN 562 (992)
Q Consensus 483 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 562 (992)
..|..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..
T Consensus 71 ~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 150 (220)
T 2v9t_B 71 LAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150 (220)
T ss_dssp ECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred cCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhC
Confidence 44555666777777788888887666666788888888888888888888888999999999999999999887788889
Q ss_pred CCCcceEecCCCcCcccCCCCCccCCcccccccCCCCcCCCCCCC
Q 037275 563 LSFLEYLNLSYNHFEGEVPTKGVFSNKTGISLSGNGKVCGGLDEL 607 (992)
Q Consensus 563 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N~~~C~~~~~~ 607 (992)
+++|++|+|++|+|.|.+...+...++....+......|..|..+
T Consensus 151 l~~L~~L~L~~N~~~c~c~l~~l~~~l~~~~~~~~~~~C~~P~~l 195 (220)
T 2v9t_B 151 LRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRL 195 (220)
T ss_dssp CTTCCEEECCSSCEECSGGGHHHHHHHHHCCCBCSCCBEEESGGG
T ss_pred CCCCCEEEeCCCCcCCCCccHHHHHHHHhCCCCccCCCcCCchHH
Confidence 999999999999999988754443333333344455677776543
No 352
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.7e-21 Score=198.00 Aligned_cols=130 Identities=17% Similarity=0.119 Sum_probs=101.0
Q ss_pred cccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCC
Q 037275 477 YNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQI 556 (992)
Q Consensus 477 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 556 (992)
+|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..
T Consensus 66 ~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 145 (220)
T 2v70_A 66 NNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 145 (220)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBC
T ss_pred CCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEEC
Confidence 33333344456677788888888888888777888888999999999999999888899999999999999999999888
Q ss_pred hhhhhcCCCcceEecCCCcCcccCCCCCccCCcccccccCCCCcCCCCCC
Q 037275 557 PEYLENLSFLEYLNLSYNHFEGEVPTKGVFSNKTGISLSGNGKVCGGLDE 606 (992)
Q Consensus 557 p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N~~~C~~~~~ 606 (992)
|..|..+++|++|++++|+|.|.++..+...++....+......|+.|..
T Consensus 146 ~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~~~~~~~~~~~~~~C~~P~~ 195 (220)
T 2v70_A 146 PGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNPRCQKPYF 195 (220)
T ss_dssp TTTTTTCTTCCEEECCSCCEECSGGGHHHHHHHHHSCCBCCCCEEEESGG
T ss_pred HHHhcCCCCCCEEEecCcCCcCCCchHHHHHHHHhcCccccCCccCCChH
Confidence 99999999999999999999998886554444433333233346877653
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=1.3e-21 Score=237.29 Aligned_cols=240 Identities=17% Similarity=0.140 Sum_probs=97.3
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCCCCc-CCCCCCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccC
Q 037275 5 SNETDRLALLAIGSQLEDDPLGVTSSWN-NSTNLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLAD 83 (992)
Q Consensus 5 ~~~~~~~~ll~~~~~~~~~~~~~~~~w~-~~~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~ 83 (992)
-.+.++++|+++..+........-..|. ..+..+.|.+++++. .+++.++|.++.+.. .+..+ |+.++|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~ 200 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQAL-----LQHKKLSQ 200 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhH-----hhcCccCc
Confidence 4567899999999987655555667774 455567999999854 679999999988854 33333 44455555
Q ss_pred CCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCC
Q 037275 84 NNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHF 163 (992)
Q Consensus 84 n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~ 163 (992)
|.+.+ ++++.|++. ..|..+..+++|+.|+|++|.+. .+|..++ .+++|++|+|++|.|+ .+
T Consensus 201 ~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l~-~l 262 (727)
T 4b8c_D 201 YSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIF-KYDFLTRLYLNGNSLT-EL 262 (727)
T ss_dssp ------------------------------------CCCCCCEEECTTSCCS-CCCGGGG-GCCSCSCCBCTTSCCS-CC
T ss_pred ccccC--------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhc-CCCCCCEEEeeCCcCc-cc
Confidence 55442 223334333 33444444444555555554444 4444444 4555555555555555 55
Q ss_pred CCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccc
Q 037275 164 PASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSL 243 (992)
Q Consensus 164 p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 243 (992)
|..|+++++|++|+|++|.|. .+|..|+++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.+++.+|..+....
T Consensus 263 p~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~ 340 (727)
T 4b8c_D 263 PAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKS 340 (727)
T ss_dssp CGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHH
T ss_pred ChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcc
Confidence 666666666666666666664 55666666666666666666665 4565666666666666666666655554443322
Q ss_pred cccchhhccccccCCCCchhhhccccCceeeeccc
Q 037275 244 PKLLGFIVAENNFAGSIPESLSNASNLVELTLFDN 278 (992)
Q Consensus 244 ~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N 278 (992)
..+..+++.+|.+++.+|.. |..|+++.|
T Consensus 341 ~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 341 VTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp HHHHHHHHHHCCCCCCCCCC---------------
T ss_pred hhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 33345667777777777753 445566666
No 354
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=1.1e-20 Score=193.07 Aligned_cols=181 Identities=18% Similarity=0.227 Sum_probs=147.6
Q ss_pred CCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCc
Q 037275 37 LCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPT 116 (992)
Q Consensus 37 ~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 116 (992)
.|.|.+|.|+... + ..+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+.
T Consensus 6 ~C~~~~v~c~~~~------------l-~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYSQG------------R-TSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCSSC------------C-SSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecCCC------------c-cCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 3799999996542 2 2344433 45889999999999965566688999999999999999855455
Q ss_pred ccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCc
Q 037275 117 NLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRN 196 (992)
Q Consensus 117 ~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 196 (992)
.+..+++|++|++++|+++ .+|...+..+++|++|+|++|.+++..+..+.++++|++|++++|.+.+..+..|..+++
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hcCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 6788999999999999998 667666668899999999999999776777889999999999999997766667889999
Q ss_pred ccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCcccc
Q 037275 197 LILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIG 240 (992)
Q Consensus 197 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 240 (992)
|++|+|++|.+.+ .+++|++|+++.|+++|.+|..++
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTS
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCc
Confidence 9999999998764 456889999999999999987665
No 355
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=1e-19 Score=185.89 Aligned_cols=181 Identities=17% Similarity=0.189 Sum_probs=156.6
Q ss_pred CeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccc
Q 037275 77 RYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIAD 156 (992)
Q Consensus 77 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~ 156 (992)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..++.+++|++|++++|+++ .+|...+..+++|++|+|++
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEECCC
Confidence 57888999998 778655 468999999999999655667899999999999999998 77777777899999999999
Q ss_pred cccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCC
Q 037275 157 NHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLP 236 (992)
Q Consensus 157 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~ 236 (992)
|.+++..+..|.++++|++|++++|++.+..+..|..+++|++|+|++|++++..+..+..+++|++|++++|.+.+.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-- 163 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-- 163 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC--
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC--
Confidence 999977777789999999999999999877777789999999999999999976666789999999999999988753
Q ss_pred ccccccccccchhhccccccCCCCchhhhcccc
Q 037275 237 LDIGVSLPKLLGFIVAENNFAGSIPESLSNASN 269 (992)
Q Consensus 237 ~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~ 269 (992)
.++++.|.+..|+++|.+|..++.++.
T Consensus 164 ------~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 ------CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ------TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ------CCCHHHHHHHHHhCCceeeccCccccC
Confidence 457888888888888888888776654
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=5.8e-20 Score=190.46 Aligned_cols=163 Identities=21% Similarity=0.252 Sum_probs=111.9
Q ss_pred CCCcCCCCCCceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecc
Q 037275 29 SSWNNSTNLCQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANN 108 (992)
Q Consensus 29 ~~w~~~~~~c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n 108 (992)
.-|..+++.|+|.+|.|+... + +.+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 10 ~~~~~~~~~Cs~~~v~c~~~~------------l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 10 SAACPSQCSCSGTTVDCRSKR------------H-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp -CCCCTTCEEETTEEECTTSC------------C-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred hccCCCCCEEeCCEeEccCCC------------c-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 344468889999999996432 3 45666554 88999999999999777888889999999999999
Q ss_pred cCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcC
Q 037275 109 SFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIP 188 (992)
Q Consensus 109 ~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 188 (992)
+|++..+..|..+++|++|+|++|+++ .+|...+..+++|++|+|++|+++ .+|..+..+++|++|+|++|++.+..+
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCH
Confidence 997433455677888888888877776 555554445666666666666666 556666666666666666666644444
Q ss_pred CccCCCCcccEEeccCcccc
Q 037275 189 NNLGNLRNLILLNLGENRFS 208 (992)
Q Consensus 189 ~~l~~l~~L~~L~L~~n~l~ 208 (992)
..|..+++|+.|+|++|.+.
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBC
T ss_pred HHHhCCCCCCEEEeeCCCcc
Confidence 45555555555555555555
No 357
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=3.7e-20 Score=215.78 Aligned_cols=190 Identities=24% Similarity=0.337 Sum_probs=123.7
Q ss_pred CcceEeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEe
Q 037275 322 TELTAIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLY 401 (992)
Q Consensus 322 ~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 401 (992)
.+|+.|++++|++++ +|..+. ++|++|+|++|+|+. +| ..+++|++|+|++|+|++ +|. +.. +|+.|+
T Consensus 59 ~~L~~L~Ls~n~L~~-lp~~l~---~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~ 126 (571)
T 3cvr_A 59 NQFSELQLNRLNLSS-LPDNLP---PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLD 126 (571)
T ss_dssp TTCSEEECCSSCCSC-CCSCCC---TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEE
T ss_pred CCccEEEeCCCCCCc-cCHhHc---CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEE
Confidence 367777777777775 454432 456677777777663 34 335666677777776664 444 443 666677
Q ss_pred ccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhccccccccccccccc
Q 037275 402 LDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLS 481 (992)
Q Consensus 402 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~ 481 (992)
|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.| +|++|+++
T Consensus 127 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L-------------------------~Ls~N~L~ 173 (571)
T 3cvr_A 127 VDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVL-------------------------SVRNNQLT 173 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEE-------------------------ECCSSCCS
T ss_pred CCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEE-------------------------ECCCCCCC
Confidence 77766664 444 45666666666666664 443 34555555 44455554
Q ss_pred CcccccccCCCCccEEeeecccccccCCccccccccc-------ceeeccCCcccccCCccccccCCCCEEECCCcccCC
Q 037275 482 GTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSL-------QQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSG 554 (992)
Q Consensus 482 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 554 (992)
+ +|. |. ++|++|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++
T Consensus 174 ~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 174 F-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp C-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred C-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 3 444 44 77888888888887 4555 554 66 88888888888 577777778888888888888888
Q ss_pred CChhhhhcCCC
Q 037275 555 QIPEYLENLSF 565 (992)
Q Consensus 555 ~~p~~~~~l~~ 565 (992)
.+|..+..+..
T Consensus 245 ~~p~~l~~l~~ 255 (571)
T 3cvr_A 245 RIRESLSQQTA 255 (571)
T ss_dssp HHHHHHHHHHH
T ss_pred cCHHHHHHhhc
Confidence 88887776543
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=4.7e-20 Score=205.62 Aligned_cols=181 Identities=24% Similarity=0.176 Sum_probs=133.6
Q ss_pred cEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCC-CccccCceeccCCcccCCCCCCcccccccccccccc
Q 037275 374 VELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLG-NLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMAD 452 (992)
Q Consensus 374 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 452 (992)
+.+++++|.++ .+|..+. ..++.|+|++|+|++..+..|. .+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 45666666666 3454433 3467777777777766666666 777777777777777766666677777777764444
Q ss_pred ccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccC
Q 037275 453 IELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSI 532 (992)
Q Consensus 453 n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 532 (992)
| +|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..
T Consensus 98 N-------------------------~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 98 N-------------------------HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp S-------------------------CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred C-------------------------cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 3 343344456777888888888888888877888888999999999999998644
Q ss_pred Cccc---cccCCCCEEECCCcccCCCChhhhhcCCC--cceEecCCCcCcccCCC
Q 037275 533 PSSL---SSLKSIKELDMSSNNLSGQIPEYLENLSF--LEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 533 ~~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~l~~N~l~~~~~~ 582 (992)
+..| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|+|.|.|..
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 4445 57899999999999999877788988887 48899999999998864
No 359
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.1e-21 Score=230.41 Aligned_cols=221 Identities=20% Similarity=0.191 Sum_probs=134.9
Q ss_pred ceEeeEEcCCCCeEEEeeccccccCCcc-------------------------CC---CCCCCCcCCeeeccCCCCCccC
Q 037275 39 QWTGVTCGHRHQRVTKLDLSNRTIGGTL-------------------------SP---YVGNLSFLRYLNLADNNFHGEI 90 (992)
Q Consensus 39 ~w~gv~c~~~~~~v~~ldl~~~~l~~~l-------------------------~~---~l~~l~~L~~L~L~~n~l~~~~ 90 (992)
.|.++.|+....+|-.++++.-.+.-.. +. .+...++|+.|+|++|+++ .+
T Consensus 286 ~W~~~~~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~L~~L~Ls~n~L~-~L 364 (567)
T 1dce_A 286 EWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKST-VL 364 (567)
T ss_dssp CCBCTTSSCCSEEEEEEECCGGGTSTTSSEEEEEEEETTTTEEEEEEEETTCSEEEEECCSTTTTSSSCCCCHHHHH-HH
T ss_pred eeccCCcccccceeEEeecCccccccccccceEEEeeccCCCCccccccCCCchhhhcccccCccceeccCChhhHH-hh
Confidence 5777777666666777776654332110 00 1356677777777777776 67
Q ss_pred CccccCCCCCCEEEeeccc-------------CCCCCCcccccCCCCcEee-cccccccccCChhhcccccccccccccc
Q 037275 91 PHQIGRLVRLEALVLANNS-------------FSGKIPTNLSRCSNLISFN-ARRNNLVGEIPAELGYNWLKLENLTIAD 156 (992)
Q Consensus 91 p~~~~~l~~L~~L~Ls~n~-------------l~~~~p~~l~~l~~L~~L~-l~~n~l~~~~p~~~~~~l~~L~~L~L~~ 156 (992)
|++++.+++|++|++++|. +.+.+|..++.+++|+.|+ ++.|.+. .|+.+.+++
T Consensus 365 p~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~------------~L~~l~l~~ 432 (567)
T 1dce_A 365 QSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD------------DLRSKFLLE 432 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc------------hhhhhhhhc
Confidence 7777777777777776654 4445556666666666666 4544332 345555566
Q ss_pred cccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCC
Q 037275 157 NHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLP 236 (992)
Q Consensus 157 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~ 236 (992)
|.++...+ ..|+.|+|++|.+.+ +|. |+.+++|+.|+|++|+|+ .+|..++.+++|++|+|++|++++
T Consensus 433 n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~--- 500 (567)
T 1dce_A 433 NSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN--- 500 (567)
T ss_dssp HHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC---
T ss_pred ccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC---
Confidence 66553211 136777777777744 555 777777777777777777 567777777777777777777662
Q ss_pred ccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccc-cccccccCccceEecCCCCCCCCC
Q 037275 237 LDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKV-SIYFRSLKNLEWLNLGSNNLGTGE 308 (992)
Q Consensus 237 ~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~ 308 (992)
+| .++.+++|++|+|++|+|++.. |..|..+++|++|+|++|+++.++
T Consensus 501 -----------------------lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 501 -----------------------VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp -----------------------CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred -----------------------Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 23 4555555666666666665554 555555566666666665555443
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.4e-19 Score=201.83 Aligned_cols=179 Identities=23% Similarity=0.232 Sum_probs=148.0
Q ss_pred cEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCcc-ccccccccccccccccccCchhhhhhcccccccccc
Q 037275 398 QLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLG-NCKNLIELHMADIELTGALPPQILSISTLSLSLDLS 476 (992)
Q Consensus 398 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~ 476 (992)
+.+++++|+++ .+|..+. +.++.|+|++|+|++..+..|. .+++|+.|++++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~------------------------ 73 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSH------------------------ 73 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCS------------------------
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCC------------------------
Confidence 68999999998 5666554 3588999999999987777787 888888885554
Q ss_pred cccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCC
Q 037275 477 YNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQI 556 (992)
Q Consensus 477 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 556 (992)
|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..
T Consensus 74 -N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 74 -NHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp -SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred -CcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 5555455667899999999999999999888888999999999999999999888999999999999999999999766
Q ss_pred hhhh---hcCCCcceEecCCCcCcccCCC-CCccCC--cccccccCCCCcCCCC
Q 037275 557 PEYL---ENLSFLEYLNLSYNHFEGEVPT-KGVFSN--KTGISLSGNGKVCGGL 604 (992)
Q Consensus 557 p~~~---~~l~~L~~L~l~~N~l~~~~~~-~~~~~~--~~~~~l~~N~~~C~~~ 604 (992)
+..| ..+++|+.|+|++|+|+..++. ...++. +..+.+.+|||.|+|.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 6666 6799999999999999975542 122333 3678999999999884
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=6.6e-19 Score=182.50 Aligned_cols=95 Identities=18% Similarity=0.267 Sum_probs=76.0
Q ss_pred ccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCC
Q 037275 486 LEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSF 565 (992)
Q Consensus 486 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 565 (992)
..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++
T Consensus 82 ~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 160 (229)
T 3e6j_A 82 GVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSS 160 (229)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTT
T ss_pred hhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCC
Confidence 34556677777777777777666667778888888888888888 67788888888888888888888777677888888
Q ss_pred cceEecCCCcCcccCC
Q 037275 566 LEYLNLSYNHFEGEVP 581 (992)
Q Consensus 566 L~~L~l~~N~l~~~~~ 581 (992)
|+.|++++|+|.|.++
T Consensus 161 L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 161 LTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCEEECTTSCBCTTBG
T ss_pred CCEEEeeCCCccCCcc
Confidence 8888888888888876
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=2.6e-19 Score=192.87 Aligned_cols=186 Identities=24% Similarity=0.336 Sum_probs=137.5
Q ss_pred EeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCccc
Q 037275 353 VIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQ 432 (992)
Q Consensus 353 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 432 (992)
.+..+.+++.. .+..+++|+.|++++|.+... + .+..+++|+.|+|++|++++..+ +..+++|+.|++++|+++
T Consensus 30 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 103 (291)
T 1h6t_A 30 NLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK 103 (291)
T ss_dssp HTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred HhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC
Confidence 34444444322 235677788888888888743 3 47778888888888888875444 778888888888888887
Q ss_pred CCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCccc
Q 037275 433 GSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTL 512 (992)
Q Consensus 433 ~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 512 (992)
+ ++ .+..+++|++|++++|+++ + + ..+..+++|++|++++|++++. ..+
T Consensus 104 ~-~~-~l~~l~~L~~L~L~~n~i~-------------------------~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l 152 (291)
T 1h6t_A 104 D-LS-SLKDLKKLKSLSLEHNGIS-------------------------D-I-NGLVHLPQLESLYLGNNKITDI--TVL 152 (291)
T ss_dssp C-GG-GGTTCTTCCEEECTTSCCC-------------------------C-C-GGGGGCTTCCEEECCSSCCCCC--GGG
T ss_pred C-Ch-hhccCCCCCEEECCCCcCC-------------------------C-C-hhhcCCCCCCEEEccCCcCCcc--hhh
Confidence 4 33 3777777777755555544 2 1 3466788888999999988864 578
Q ss_pred ccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCccc
Q 037275 513 SACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGE 579 (992)
Q Consensus 513 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 579 (992)
..+++|+.|+|++|+|++..+ +..+++|+.|+|++|+|++ +| .+..+++|+.|++++|++...
T Consensus 153 ~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 153 SRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred ccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 888899999999999886544 8888999999999999985 44 488889999999999988763
No 363
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=5.9e-19 Score=190.09 Aligned_cols=174 Identities=24% Similarity=0.356 Sum_probs=96.9
Q ss_pred CCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccc
Q 037275 71 GNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLE 150 (992)
Q Consensus 71 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~ 150 (992)
..+++|++|++++|.+. .+|. +..+++|++|+|++|++++ ++. ++.+++|++|++++|+++ .+|. + ..+++|+
T Consensus 43 ~~l~~L~~L~l~~~~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~-~~~~-l-~~l~~L~ 115 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVK-DLSS-L-KDLKKLK 115 (291)
T ss_dssp HHHHTCCEEECTTSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CGGG-G-TTCTTCC
T ss_pred hhcCcccEEEccCCCcc-cChh-HhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCC-CChh-h-ccCCCCC
Confidence 35666666666666666 3443 6666666666666666663 333 666666666666666665 2332 2 2455555
Q ss_pred cccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCc
Q 037275 151 NLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNR 230 (992)
Q Consensus 151 ~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~ 230 (992)
+|+|++|.+++. +.+..+++|++|++++|.+.+. ..+..+++|++|+|++|++++..| +..+++|++|++++|+
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 555555555532 3455555555555555555332 345555555555555555553322 5555555555555555
Q ss_pred cCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccc
Q 037275 231 FNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKV 284 (992)
Q Consensus 231 l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 284 (992)
++ .+| .+..+++|+.|++++|+++..+
T Consensus 190 i~--------------------------~l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 190 IS--------------------------DLR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp CC--------------------------BCG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred CC--------------------------CCh-hhccCCCCCEEECcCCcccCCc
Confidence 44 122 2556667777777777666433
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1e-18 Score=179.67 Aligned_cols=153 Identities=16% Similarity=0.197 Sum_probs=108.0
Q ss_pred cEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccccccc
Q 037275 374 VELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMADI 453 (992)
Q Consensus 374 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 453 (992)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|++|++++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45566666665 3444333 46677777777776655566667777777777777777666667777777766644433
Q ss_pred cccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCC
Q 037275 454 ELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIP 533 (992)
Q Consensus 454 ~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 533 (992)
+ +++..+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+|++..+
T Consensus 91 ~-------------------------l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 91 K-------------------------ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp C-------------------------CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred c-------------------------CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 3 332333446677888888888888887778888888888888888888887777
Q ss_pred ccccccCCCCEEECCCcccCC
Q 037275 534 SSLSSLKSIKELDMSSNNLSG 554 (992)
Q Consensus 534 ~~~~~l~~L~~L~Ls~N~l~~ 554 (992)
..|..+++|++|+|++|.+..
T Consensus 146 ~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 146 GTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTTCTTCCEEECCSSCEEC
T ss_pred HHHhCCCCCCEEEeCCCCcCC
Confidence 778888889999999998863
No 365
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1e-18 Score=179.79 Aligned_cols=156 Identities=19% Similarity=0.201 Sum_probs=118.3
Q ss_pred cEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCC-CCCCCccccCceeccCCcccCCCCCCcccccccccccccc
Q 037275 374 VELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIP-TSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELHMAD 452 (992)
Q Consensus 374 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 452 (992)
+.+++++|.++ .+|..+. ..++.|+|++|+|++..+ ..|..+++|+.|+|++|+|++..+..|..+++|++|
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L---- 86 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI---- 86 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE----
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE----
Confidence 46667777766 3454443 345677777777775543 346777777777777777776666677777777776
Q ss_pred ccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccC
Q 037275 453 IELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSI 532 (992)
Q Consensus 453 n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 532 (992)
+|++|.+++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..
T Consensus 87 ---------------------~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 145 (220)
T 2v70_A 87 ---------------------LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 145 (220)
T ss_dssp ---------------------ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBC
T ss_pred ---------------------ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEEC
Confidence 44444444455666788889999999999999888889999999999999999999888
Q ss_pred CccccccCCCCEEECCCcccCCCCh
Q 037275 533 PSSLSSLKSIKELDMSSNNLSGQIP 557 (992)
Q Consensus 533 ~~~~~~l~~L~~L~Ls~N~l~~~~p 557 (992)
|..|..+++|+.|+|++|.+....+
T Consensus 146 ~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 146 PGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTTTTTCTTCCEEECCSCCEECSGG
T ss_pred HHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999999999999999986544
No 366
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=4.1e-19 Score=178.53 Aligned_cols=120 Identities=25% Similarity=0.359 Sum_probs=83.8
Q ss_pred ccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcc
Q 037275 488 VGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLE 567 (992)
Q Consensus 488 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 567 (992)
|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+
T Consensus 50 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (192)
T 1w8a_A 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129 (192)
T ss_dssp GGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCC
T ss_pred cccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCC
Confidence 56667777777777777766677777777777777777777766666677777777777777777777777777777777
Q ss_pred eEecCCCcCcccCCCCCccCCcccccccCCCCcCCCCCCC
Q 037275 568 YLNLSYNHFEGEVPTKGVFSNKTGISLSGNGKVCGGLDEL 607 (992)
Q Consensus 568 ~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N~~~C~~~~~~ 607 (992)
+|+|++|+|.|.++..+...+++...+.++...|+.|..+
T Consensus 130 ~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~~l 169 (192)
T 1w8a_A 130 SLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKV 169 (192)
T ss_dssp EEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSSTTT
T ss_pred EEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCChHH
Confidence 7777777777777654444444444556666677666543
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=1.8e-18 Score=204.12 Aligned_cols=177 Identities=23% Similarity=0.341 Sum_probs=82.5
Q ss_pred CCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccc
Q 037275 71 GNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLE 150 (992)
Q Consensus 71 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~ 150 (992)
..+.+|+.|+|++|.+. .+| .+..+++|++|+|++|++++ +|. +..+++|+.|+|++|++. .+|
T Consensus 40 ~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~-~~~-l~~l~~L~~L~Ls~N~l~-~l~----------- 103 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LTNLKNLGWLFLDENKIK-DLS----------- 103 (605)
T ss_dssp HHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCC-CCT-----------
T ss_pred hcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCC-Chh-hccCCCCCEEECcCCCCC-CCh-----------
Confidence 34455555555555554 333 35555555555555555552 222 445555555555555444 222
Q ss_pred cccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCc
Q 037275 151 NLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNR 230 (992)
Q Consensus 151 ~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~ 230 (992)
.+..+++|++|+|++|.+.+ + +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+
T Consensus 104 ---------------~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~ 164 (605)
T 1m9s_A 104 ---------------SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQ 164 (605)
T ss_dssp ---------------TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSC
T ss_pred ---------------hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCc
Confidence 44555555555555555532 2 2355555555555555555532 345555555555555555
Q ss_pred cCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeecccccccccccc
Q 037275 231 FNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIY 287 (992)
Q Consensus 231 l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 287 (992)
+.+..| +..+++|+.|++++|++.+. ..+..+++|+.|+|++|.+.+.+...
T Consensus 165 l~~~~~---l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~ 216 (605)
T 1m9s_A 165 ISDIVP---LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINH 216 (605)
T ss_dssp CCCCGG---GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCC
T ss_pred CCCchh---hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccc
Confidence 542211 11222222222222222221 13555566666666666665444333
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=2.8e-18 Score=202.47 Aligned_cols=202 Identities=23% Similarity=0.311 Sum_probs=127.5
Q ss_pred ccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCccCCCCCccccccccccchh
Q 037275 170 LSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRFNGSLPLDIGVSLPKLLGF 249 (992)
Q Consensus 170 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~L~~l 249 (992)
+..+..+.+..+.+....+ +..+.+|+.|++++|.++. +| .+..+++|+.|+|++|++.+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~---------------- 79 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD---------------- 79 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCC----------------
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCC----------------
Confidence 4455566666666644332 4566777777777777763 33 46677777777777776652
Q ss_pred hccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeec
Q 037275 250 IVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGL 329 (992)
Q Consensus 250 ~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l 329 (992)
++. +..+++|+.|+|++|+|++.. .+..+++|++|+|++|+++.+ ..+..+++|+.|+|
T Consensus 80 ----------~~~-l~~l~~L~~L~Ls~N~l~~l~--~l~~l~~L~~L~Ls~N~l~~l--------~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 80 ----------IKP-LTNLKNLGWLFLDENKIKDLS--SLKDLKKLKSLSLEHNGISDI--------NGLVHLPQLESLYL 138 (605)
T ss_dssp ----------CGG-GGGCTTCCEEECCSSCCCCCT--TSTTCTTCCEEECTTSCCCCC--------GGGGGCTTCSEEEC
T ss_pred ----------Chh-hccCCCCCEEECcCCCCCCCh--hhccCCCCCEEEecCCCCCCC--------ccccCCCccCEEEC
Confidence 222 667777888888888877532 577777777777777777653 22555566666666
Q ss_pred CCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccc
Q 037275 330 DDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAG 409 (992)
Q Consensus 330 ~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 409 (992)
++|++.+ . ..+..+++|+.|+|++|++.+..| +..+++|+.|+|++|+|++
T Consensus 139 s~N~l~~-------------------------l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 139 GNNKITD-------------------------I--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CSSCCCC-------------------------C--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCccCC-------------------------c--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 6665553 2 345566677777777777765444 6667777777777777764
Q ss_pred cCCCCCCCccccCceeccCCcccCCCCCCccccc
Q 037275 410 GIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCK 443 (992)
Q Consensus 410 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 443 (992)
. ..+..+++|+.|+|++|++.+.....+..+.
T Consensus 190 l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~ 221 (605)
T 1m9s_A 190 L--RALAGLKNLDVLELFSQECLNKPINHQSNLV 221 (605)
T ss_dssp C--GGGTTCTTCSEEECCSEEEECCCCCCCSSCE
T ss_pred C--hHHccCCCCCEEEccCCcCcCCcccccccEE
Confidence 3 2466677777777777777654333333333
No 369
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=2.5e-18 Score=181.49 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=106.5
Q ss_pred CCCCCccccccceEEEEeEECCCCeE--EEEEEeeccCCC------------------------chhHHHHHHHHHHhcc
Q 037275 681 FSSSNMIGQGSFGFVYKGNLGENGMM--VAVKVINLKQKG------------------------ASNGFVAECQALRNIR 734 (992)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 734 (992)
|++.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|+.+++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66789999999999999998668888 999997533111 0125789999999998
Q ss_pred CCcc--eeEEEEeecccccCcceEEEEEEeccC-C----CHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHH-hc
Q 037275 735 HRNL--IKIITICSSIDFKGVDFQAIVYEYMQN-G----SLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIH-HH 806 (992)
Q Consensus 735 h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~ 806 (992)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.||+||| +.
T Consensus 129 ~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~~~ 190 (258)
T 1zth_A 129 EAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQEA 190 (258)
T ss_dssp HTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHHTS
T ss_pred hCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHHHC
Confidence 8864 444432 123899999942 4 67766432 223456789999999999999 88
Q ss_pred CCCCeEeccCCCCCeeeCCCCcEEEeecccceec
Q 037275 807 CQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFL 840 (992)
Q Consensus 807 ~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 840 (992)
+|+||||||+|||++. .++|+|||+|...
T Consensus 191 ---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 191 ---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp ---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred ---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999999988 9999999999754
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=1.2e-20 Score=221.37 Aligned_cols=192 Identities=19% Similarity=0.174 Sum_probs=141.8
Q ss_pred CCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCcc-------------ccccCCCCCCCccccCcee-ccCCcccCC
Q 037275 369 NLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNF-------------LAGGIPTSLGNLTLLTNLA-LSSNDLQGS 434 (992)
Q Consensus 369 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l~~~ 434 (992)
..++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+..|..+.++++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3455555566666555 455555555556655555443 2334444455555555555 444433
Q ss_pred CCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCccccc
Q 037275 435 IPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSA 514 (992)
Q Consensus 435 ~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 514 (992)
.+|..+.+.+|.++. +|. ..++.|+|++|.+++ +|. ++.+++|+.|+|++|+|+ .+|..|+.
T Consensus 423 --------~~L~~l~l~~n~i~~-l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLK-MEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp --------HHHHHHHHHHHHHHH-HHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred --------chhhhhhhhcccccc-cCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 234455555555552 111 135678999999995 666 999999999999999999 78899999
Q ss_pred ccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCC-hhhhhcCCCcceEecCCCcCcccCCCCC
Q 037275 515 CTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQI-PEYLENLSFLEYLNLSYNHFEGEVPTKG 584 (992)
Q Consensus 515 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~~ 584 (992)
+++|+.|+|++|+|++ +| .|+++++|++|+|++|+|++.. |..+..+++|+.|+|++|++++.++...
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 553 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQE 553 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTT
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHH
Confidence 9999999999999996 67 8999999999999999999887 9999999999999999999999887643
No 371
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=2.4e-18 Score=172.73 Aligned_cols=158 Identities=24% Similarity=0.278 Sum_probs=124.2
Q ss_pred CceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeec
Q 037275 422 TNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISV 501 (992)
Q Consensus 422 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 501 (992)
+.+++++|.++ .+|..+. ++|++| ++++|.++ .+|..|..+++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L-------------------------~L~~n~i~-~ip~~~~~l~~L~~L~Ls~ 63 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTEL-------------------------YLDGNQFT-LVPKELSNYKHLTLIDLSN 63 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEE-------------------------ECCSSCCC-SCCGGGGGCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEE-------------------------ECCCCcCc-hhHHHhhcccCCCEEECCC
Confidence 45677777776 4554332 355555 44444444 5667788899999999999
Q ss_pred ccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCC
Q 037275 502 NRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVP 581 (992)
Q Consensus 502 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 581 (992)
|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|++++|+|.|.+.
T Consensus 64 N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 64 NRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 99998888899999999999999999998888899999999999999999997777789999999999999999999988
Q ss_pred CCCccCCcccccccCCCCcCCCCCCCC
Q 037275 582 TKGVFSNKTGISLSGNGKVCGGLDELN 608 (992)
Q Consensus 582 ~~~~~~~~~~~~l~~N~~~C~~~~~~~ 608 (992)
..+...++.......+...|+.|..+.
T Consensus 144 l~~l~~~~~~~~~~~~~~~C~~P~~l~ 170 (193)
T 2wfh_A 144 MQWLSDWVKSEYKEPGIARCAGPGEMA 170 (193)
T ss_dssp GHHHHHHHHHSSCCCSCCBEEESGGGT
T ss_pred CHHHHHHHHhccCCCCCcCcCCchHHC
Confidence 655444444433444556888876543
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=1.4e-18 Score=210.60 Aligned_cols=189 Identities=25% Similarity=0.323 Sum_probs=115.5
Q ss_pred EeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCccc
Q 037275 353 VIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQ 432 (992)
Q Consensus 353 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 432 (992)
++..|.+. ..+..+..+.+|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 34445554 56777888889999999999988 67777778899999999999998 78888889999999999999998
Q ss_pred CCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCccc
Q 037275 433 GSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTL 512 (992)
Q Consensus 433 ~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 512 (992)
.+|..|+.+++|++|+|++|. |+ .+|..|+.+++|++|+|++|.|++.+|..+
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~-------------------------l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNM-------------------------VT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSC-------------------------CC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred -ccChhhcCCCCCCEEECCCCC-------------------------CC-ccChhhhcCCCccEEeCCCCccCCCChHHH
Confidence 678888888888888555444 44 667778899999999999999998888888
Q ss_pred ccccc-cceeeccCCcccccCCccccccCCCCEEECCCc--------ccCCCChhhhhcCCCcceEecCCCcCc
Q 037275 513 SACTS-LQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSN--------NLSGQIPEYLENLSFLEYLNLSYNHFE 577 (992)
Q Consensus 513 ~~l~~-L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~~l~~L~~L~l~~N~l~ 577 (992)
..+.. +..|+|++|.+++.+|.. |+.|++++| .|.+..+..+..+..+....+++|-+.
T Consensus 337 ~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 337 TEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HHHHHHHHHHHHHHCCCCCCCCCC-----------------------------------------------CCC
T ss_pred hhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 66533 345889999999888764 556667777 444444444555556666666666554
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=2.6e-18 Score=189.02 Aligned_cols=156 Identities=16% Similarity=0.153 Sum_probs=99.6
Q ss_pred CccCCCCCC--CCcCCeeeccCCCCCccCCccccC-CCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCCh
Q 037275 64 GTLSPYVGN--LSFLRYLNLADNNFHGEIPHQIGR-LVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPA 140 (992)
Q Consensus 64 ~~l~~~l~~--l~~L~~L~L~~n~l~~~~p~~~~~-l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~ 140 (992)
|.++..+.. +.+++.|.++++ +.+.--..+.. +++|++|||++|++. .....-+.++.+..+.+..| .+|.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~-~~~~~~~~~~~~~~~~~~~~----~I~~ 86 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIK-MYSGKAGTYPNGKFYIYMAN----FVPA 86 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEEC-CEEESSSSSGGGCCEEECTT----EECT
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeE-EecCcccccccccccccccc----ccCH
Confidence 555555554 778899999864 22111123334 788999999999987 11111122222444555555 5677
Q ss_pred hhccc--------ccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCccc----c
Q 037275 141 ELGYN--------WLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRF----S 208 (992)
Q Consensus 141 ~~~~~--------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l----~ 208 (992)
..|.+ +++|+.|+|.+ .++...+.+|.++++|++|++.+|.+....+..|.++.++..+.+..+.. .
T Consensus 87 ~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~ 165 (329)
T 3sb4_A 87 YAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKN 165 (329)
T ss_dssp TTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTST
T ss_pred HHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccc
Confidence 77777 88888888888 77756666788888888888888888777777788877777777665322 2
Q ss_pred cccCccccccCCCc-EEec
Q 037275 209 GIVPPSIFNISSLE-NVFL 226 (992)
Q Consensus 209 ~~~p~~l~~l~~L~-~L~l 226 (992)
......|.++..|+ .+.+
T Consensus 166 ~i~~~~f~~~~~L~~~i~~ 184 (329)
T 3sb4_A 166 RWEHFAFIEGEPLETTIQV 184 (329)
T ss_dssp TTTTSCEEESCCCEEEEEE
T ss_pred cccccccccccccceeEEe
Confidence 22344566666666 4443
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=9.1e-18 Score=169.63 Aligned_cols=154 Identities=19% Similarity=0.236 Sum_probs=101.3
Q ss_pred CCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccc
Q 037275 71 GNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLE 150 (992)
Q Consensus 71 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~ 150 (992)
+.+++|++|++++|.++ .+| .+..+++|++|++++|+++ . +..+..+++|++|++++|++++..|..+. .+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~-~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLS-GLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCT-TCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhc-CCCCCC
Confidence 45667777777777777 566 5777777777777777554 2 33666777777777777777655555554 566777
Q ss_pred cccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCc
Q 037275 151 NLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNR 230 (992)
Q Consensus 151 ~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~ 230 (992)
+|++++|.+++..|..++.+++|++|++++|...+.+| .+..+++|++|++++|++++ ++ .+..+++|++|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 77777777766666667777777777777776224444 56677777777777777764 33 56667777777777776
Q ss_pred cC
Q 037275 231 FN 232 (992)
Q Consensus 231 l~ 232 (992)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 64
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=2.4e-17 Score=166.48 Aligned_cols=154 Identities=19% Similarity=0.257 Sum_probs=94.6
Q ss_pred ccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccccccccccccCCCCCCcccccccc
Q 037275 94 IGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTL 173 (992)
Q Consensus 94 ~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 173 (992)
...+++|++|++++|+++ .+| .+..+++|++|++++|.++ . +..+..+++|
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~--------------------------~~~l~~l~~L 90 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N--------------------------YNPISGLSNL 90 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C--------------------------CGGGTTCTTC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c--------------------------chhhhcCCCC
Confidence 367778888888888887 666 5777777777777766543 1 2244555666
Q ss_pred ceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCc-cCCCCCccccccccccchhhcc
Q 037275 174 ERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNR-FNGSLPLDIGVSLPKLLGFIVA 252 (992)
Q Consensus 174 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~-l~~~~~~~~~~~~~~L~~l~l~ 252 (992)
++|++++|.+.+..+..|+.+++|++|+|++|++++..|..+..+++|++|++++|+ +.
T Consensus 91 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-------------------- 150 (197)
T 4ezg_A 91 ERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-------------------- 150 (197)
T ss_dssp CEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC--------------------
T ss_pred CEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc--------------------
Confidence 666666666655556666666666666666666665556666666666666666665 33
Q ss_pred ccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCCCC
Q 037275 253 ENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLG 305 (992)
Q Consensus 253 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 305 (992)
.+| .+..+++|++|++++|++++.. .+..+++|++|++++|+++
T Consensus 151 ------~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 151 ------DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp ------CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC---
T ss_pred ------ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcccC
Confidence 122 3455566666666666665432 4555666666666666554
No 376
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=1e-17 Score=177.30 Aligned_cols=166 Identities=21% Similarity=0.270 Sum_probs=117.2
Q ss_pred EEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeeccc
Q 037275 52 VTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARR 131 (992)
Q Consensus 52 v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~ 131 (992)
++.++++++.+.+ ++ .+..+++|++|++++|+++ .+| .+..+++|++|+|++|+++ .+|. ++.+++|++|++++
T Consensus 21 l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccC-CChh-hccCCCCCEEECCC
Confidence 4456666666633 33 4667778888888888877 566 5777888888888888877 4444 77788888888888
Q ss_pred ccccccCChhhcccccccccccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCccccccc
Q 037275 132 NNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIV 211 (992)
Q Consensus 132 n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 211 (992)
|+++ .+|.... ++|++|+|++|.+++ + +.+.++++|++|++++|++.+. + .+..+++|+.|+|++|++++.
T Consensus 95 N~l~-~l~~~~~---~~L~~L~L~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 95 NRLK-NLNGIPS---ACLSRLFLDNNELRD-T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SCCS-CCTTCCC---SSCCEEECCSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CccC-CcCcccc---CcccEEEccCCccCC-C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 8777 4554322 677778888887774 3 3577777778888887777543 3 577777777888887777754
Q ss_pred CccccccCCCcEEeccCCccCC
Q 037275 212 PPSIFNISSLENVFLPTNRFNG 233 (992)
Q Consensus 212 p~~l~~l~~L~~L~l~~N~l~~ 233 (992)
..+..+++|++|++++|.+.+
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEEC
T ss_pred -HHhccCCCCCEEeCCCCcccC
Confidence 567777777777777777763
No 377
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=9.3e-18 Score=177.66 Aligned_cols=174 Identities=18% Similarity=0.226 Sum_probs=134.4
Q ss_pred CCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccccccccc
Q 037275 72 NLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLEN 151 (992)
Q Consensus 72 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~ 151 (992)
.+.++..+++++|.++ .++ .+..+++|++|++++|+++ .+| .++.+++|++|++++|+++ .+|. +..+++|++
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~-~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQIS-DLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccC-CChh--hccCCCCCE
Confidence 5777888999999998 555 5889999999999999998 677 7889999999999999988 4554 447888888
Q ss_pred ccccccccCCCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEeccCCcc
Q 037275 152 LTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVFLPTNRF 231 (992)
Q Consensus 152 L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~l~~N~l 231 (992)
|+|++|++++ +|.... ++|++|++++|.+.+ ++ .+..+++|+.|+|++|++++. + .+..+++|++|++++|++
T Consensus 90 L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 90 LSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp EECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCC
T ss_pred EECCCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcC
Confidence 8888888885 443332 788888888888854 33 578888888888888888753 3 677788888888888777
Q ss_pred CCCCCccccccccccchhhccccccCCCCchhhhccccCceeeeccccccccccc
Q 037275 232 NGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSI 286 (992)
Q Consensus 232 ~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 286 (992)
++. ..+..+++|++|++++|.+...+..
T Consensus 163 ~~~---------------------------~~l~~l~~L~~L~l~~N~~~~~~~~ 190 (263)
T 1xeu_A 163 TNT---------------------------GGLTRLKKVNWIDLTGQKCVNEPVK 190 (263)
T ss_dssp CBC---------------------------TTSTTCCCCCEEEEEEEEEECCCEE
T ss_pred cch---------------------------HHhccCCCCCEEeCCCCcccCCccc
Confidence 621 3456677888888888888755443
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=2.8e-17 Score=165.07 Aligned_cols=176 Identities=19% Similarity=0.241 Sum_probs=115.5
Q ss_pred cEEeccCccccccCCCCCCCccccCceeccCCcccCCCCC-CccccccccccccccccccccCchhhhhhcccccccccc
Q 037275 398 QLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPP-SLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLS 476 (992)
Q Consensus 398 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~ 476 (992)
+.+++++|+++ .+|..+.. +|++|++++|+|++..+. .|..+++|++| +|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L-------------------------~Ls 62 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKL-------------------------ELK 62 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEE-------------------------ECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEE-------------------------ECC
Confidence 34555555554 33433322 455566666665544332 35556666555 444
Q ss_pred cccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCC
Q 037275 477 YNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQI 556 (992)
Q Consensus 477 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 556 (992)
+|.+++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+++..
T Consensus 63 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 63 RNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp SSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 44444455666777788888888888888877888888889999999999999888889999999999999999998765
Q ss_pred hh-hhhcCCCcceEecCCCcCcccCCCCCccCCcccccccCCCCcCCCCC
Q 037275 557 PE-YLENLSFLEYLNLSYNHFEGEVPTKGVFSNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 557 p~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N~~~C~~~~ 605 (992)
+. ++. ..++...+..+...|..|. .+......++..+...|.++.
T Consensus 143 ~l~~~~--~~l~~~~~~~~~~~C~~P~--~l~~~~l~~l~~~~~~C~~~~ 188 (192)
T 1w8a_A 143 HLAWFA--EWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp GGHHHH--HHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC-
T ss_pred cchHHH--HHHHHcCCCCCCCCCCCCh--HHcCCChhhCcHhhcCcCCCC
Confidence 52 221 2234445666666665554 345555567778888887654
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.7e-17 Score=182.55 Aligned_cols=197 Identities=11% Similarity=0.047 Sum_probs=122.5
Q ss_pred ccccchhhccccccCCCCchhhhccccCceeeeccccccccccccccccCccceEecCCCC----CCCCCCCCchhhhhc
Q 037275 243 LPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNN----LGTGEANDLDFLTLL 318 (992)
Q Consensus 243 ~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~~~~l 318 (992)
+++|+.+.+.+ +++.+-+.+|..+++|+.|++++|.+..+.+..|..+.++..+.+..+. ...+.... +
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~------f 172 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFA------F 172 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSC------E
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccc------c
Confidence 44444444444 3433344556666777777777776666666666666666666554421 11111111 2
Q ss_pred cCCCcce--------------------------EeecCCCcCCCcCCcccccccccceeEEeeCCccccccCCCccCCCc
Q 037275 319 TNCTELT--------------------------AIGLDDNRFGGVLPHSIANLSSTMTDIVIAGNQISGIIPTGIRNLVN 372 (992)
Q Consensus 319 ~~~~~L~--------------------------~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~ 372 (992)
.++..|+ .+.+.++ +.......+......|+.++|++|+++.+.+..|.++.+
T Consensus 173 ~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~-l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~ 251 (329)
T 3sb4_A 173 IEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGK-LDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKY 251 (329)
T ss_dssp EESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEEC-CCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTT
T ss_pred ccccccceeEEecCCCcHHHHHhhcccCccccceEEEeee-ecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCC
Confidence 2233333 2222221 110001111112346888888888888777788888888
Q ss_pred ccEEEccCCcCCCCCCccccCCCCCc-EEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccc
Q 037275 373 LVELCMDDNKLTGTIPHAIGELKNLQ-LLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELH 449 (992)
Q Consensus 373 L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 449 (992)
|+.|+|.+| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.|+++.|.++...+.+|.++++|+.++
T Consensus 252 L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 252 LLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 888888887 6667777888888888 888887 67766778888888888888888888877777888888888774
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=5.1e-16 Score=155.75 Aligned_cols=130 Identities=22% Similarity=0.229 Sum_probs=115.8
Q ss_pred ccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcc
Q 037275 472 SLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNN 551 (992)
Q Consensus 472 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 551 (992)
.+++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4577888887 5666553 68999999999998 677899999999999999999998888999999999999999999
Q ss_pred cCCCChhhhhcCCCcceEecCCCcCcccCCC-CCccCCcccccccCCCCcCCCCC
Q 037275 552 LSGQIPEYLENLSFLEYLNLSYNHFEGEVPT-KGVFSNKTGISLSGNGKVCGGLD 605 (992)
Q Consensus 552 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~~~~~~l~~N~~~C~~~~ 605 (992)
|++..|..|..+++|++|+|++|+++..++. ...++.++.+++.+|+|.|+|..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 9998889999999999999999999987764 45678899999999999998853
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=8.2e-16 Score=150.90 Aligned_cols=135 Identities=21% Similarity=0.246 Sum_probs=91.4
Q ss_pred cccCceeccCCccc-CCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEE
Q 037275 419 TLLTNLALSSNDLQ-GSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYF 497 (992)
Q Consensus 419 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L 497 (992)
++|+.|++++|.++ +.+|..+..+++|++|++++|.++ +. ..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~-------------------------~~--~~~~~l~~L~~L 76 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-------------------------SV--SNLPKLPKLKKL 76 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC-------------------------CC--SSCCCCSSCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC-------------------------Ch--hhhccCCCCCEE
Confidence 34555555555554 344555555555555533333332 12 345567777888
Q ss_pred eeecccccccCCcccccccccceeeccCCcccccC-CccccccCCCCEEECCCcccCCCCh---hhhhcCCCcceEecCC
Q 037275 498 NISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSI-PSSLSSLKSIKELDMSSNNLSGQIP---EYLENLSFLEYLNLSY 573 (992)
Q Consensus 498 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~ 573 (992)
+|++|++++.+|..+..+++|++|+|++|+|++.. +..+..+++|++|+|++|++++..+ ..+..+++|++|++++
T Consensus 77 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 77 ELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp EEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 88888887667777777888888888888887532 2678888888888888888886555 4788888888888888
Q ss_pred CcCcccC
Q 037275 574 NHFEGEV 580 (992)
Q Consensus 574 N~l~~~~ 580 (992)
|.+...+
T Consensus 157 n~~~~~~ 163 (168)
T 2ell_A 157 REDQEAP 163 (168)
T ss_dssp TTSCBCC
T ss_pred CChhhcc
Confidence 8876544
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=1.1e-15 Score=150.14 Aligned_cols=134 Identities=19% Similarity=0.205 Sum_probs=84.7
Q ss_pred CCCcCCeeeccCCCCC-ccCCccccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhcccccccc
Q 037275 72 NLSFLRYLNLADNNFH-GEIPHQIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWLKLE 150 (992)
Q Consensus 72 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~~L~ 150 (992)
..++|++|+|++|+++ +.+|..+..+++|++|+|++|++++. ..++.+++|++|++++|++++.+|..+ ..+++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~ 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLA-EKLPNLT 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHH-HHCTTCC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHH-hhCCCCC
Confidence 3467888888888887 67888788888888888888888743 667777777777777777774444333 2455666
Q ss_pred cccccccccCCCC-CCccccccccceEEecCCcccCCcC---CccCCCCcccEEeccCcccc
Q 037275 151 NLTIADNHLTGHF-PASIGNLSTLERINVLGNGLWGRIP---NNLGNLRNLILLNLGENRFS 208 (992)
Q Consensus 151 ~L~L~~n~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~~---~~l~~l~~L~~L~L~~n~l~ 208 (992)
+|+|++|.+++.. +..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+.
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666666665321 1455555555555555555533222 24555555555555555554
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=2e-15 Score=149.53 Aligned_cols=109 Identities=22% Similarity=0.272 Sum_probs=84.2
Q ss_pred ccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccC
Q 037275 474 DLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLS 553 (992)
Q Consensus 474 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 553 (992)
++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+
T Consensus 34 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 113 (177)
T 2o6r_A 34 ELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLK 113 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred EeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcce
Confidence 44444444444455667778888888888888766677788888888888888888777777888888888888888888
Q ss_pred CCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 554 GQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 554 ~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
+..+..+..+++|++|++++|+|.|.++.
T Consensus 114 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 114 SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred EeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 76666678888888888888888887764
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=1.2e-15 Score=146.42 Aligned_cols=128 Identities=23% Similarity=0.321 Sum_probs=85.9
Q ss_pred cccCceeccCCccc-CCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEE
Q 037275 419 TLLTNLALSSNDLQ-GSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYF 497 (992)
Q Consensus 419 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L 497 (992)
++|+.|++++|.++ +.+|..+..+++|++|++++|.++ +. ..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~--~~~~~l~~L~~L 69 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-------------------------SI--ANLPKLNKLKKL 69 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCC-------------------------CC--TTCCCCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCC-------------------------Cc--hhhhcCCCCCEE
Confidence 44555555555555 445555555555555544333333 12 345566777777
Q ss_pred eeecccccccCCcccccccccceeeccCCccccc-CCccccccCCCCEEECCCcccCCCCh---hhhhcCCCcceEecCC
Q 037275 498 NISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGS-IPSSLSSLKSIKELDMSSNNLSGQIP---EYLENLSFLEYLNLSY 573 (992)
Q Consensus 498 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~ 573 (992)
+|++|++++.+|..+..+++|++|++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|++||+++
T Consensus 70 ~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 70 ELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 7777777766777777778888888888888753 34678888888888888888886655 5778888888888764
No 385
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=4.9e-16 Score=169.18 Aligned_cols=136 Identities=15% Similarity=0.194 Sum_probs=99.3
Q ss_pred CCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCC--------------CchhH--------HHHHHHHHHhccCCc
Q 037275 680 DFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK--------------GASNG--------FVAECQALRNIRHRN 737 (992)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~l~h~n 737 (992)
-|++.+.||+|+||.||+|.+. +|+.||||+++.... ..... ..+|...+.++.+.+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3889999999999999999985 799999999853210 00111 134666666665444
Q ss_pred ce--eEEEEeecccccCcceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEecc
Q 037275 738 LI--KIITICSSIDFKGVDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGD 815 (992)
Q Consensus 738 iv--~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~D 815 (992)
+. ..+++ ...++||||+++++|..+.. . .....++.|++.+|.|||+. ||||||
T Consensus 175 v~vp~p~~~---------~~~~LVME~i~G~~L~~l~~----------~--~~~~~l~~qll~~l~~lH~~---gIVHrD 230 (397)
T 4gyi_A 175 FPVPEPIAQ---------SRHTIVMSLVDALPMRQVSS----------V--PDPASLYADLIALILRLAKH---GLIHGD 230 (397)
T ss_dssp CSCCCEEEE---------ETTEEEEECCSCEEGGGCCC----------C--SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCCCeeeec---------cCceEEEEecCCccHhhhcc----------c--HHHHHHHHHHHHHHHHHHHC---CCcCCC
Confidence 32 22222 11279999999888765432 1 12346789999999999999 999999
Q ss_pred CCCCCeeeCCCC----------cEEEeecccceec
Q 037275 816 LKPSNVLLDQDL----------VAHLGDFGLAKFL 840 (992)
Q Consensus 816 lkp~NIll~~~~----------~~kl~Dfg~a~~~ 840 (992)
|||.|||+++++ .+.|+||+.+...
T Consensus 231 LKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 231 FNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999999998776 4899999988754
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=3.4e-14 Score=159.20 Aligned_cols=252 Identities=11% Similarity=0.138 Sum_probs=125.7
Q ss_pred hhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcc
Q 037275 262 ESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHS 341 (992)
Q Consensus 262 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~ 341 (992)
.+|.+. +|+.+.+..| ++.+...+|.+. +|+.+.+.+ .++.++.. .+.+|++|+.+++++|++.......
T Consensus 130 ~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~------aF~~c~~L~~l~l~~n~l~~I~~~a 199 (401)
T 4fdw_A 130 DAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKED------IFYYCYNLKKADLSKTKITKLPAST 199 (401)
T ss_dssp TTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSS------TTTTCTTCCEEECTTSCCSEECTTT
T ss_pred hhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHH------HhhCcccCCeeecCCCcceEechhh
Confidence 345443 5666666555 555555666653 566666654 45554443 2344555555555555554332222
Q ss_pred cccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCcccc
Q 037275 342 IANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLL 421 (992)
Q Consensus 342 ~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 421 (992)
|.. ..|+.+.+.+ +++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .+.++.....+|.++++|
T Consensus 200 F~~--~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L 273 (401)
T 4fdw_A 200 FVY--AGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPEL 273 (401)
T ss_dssp TTT--CCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTC
T ss_pred Eee--cccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCC
Confidence 221 2344444442 244444455555555555555543 33233444444 44555555 233333334444444444
Q ss_pred CceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeec
Q 037275 422 TNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISV 501 (992)
Q Consensus 422 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 501 (992)
+.+++.+|.+. .+.+....+..|.++++|+.++|.
T Consensus 274 ~~l~l~~~~~~--------------------------------------------~~~~~~I~~~aF~~c~~L~~l~l~- 308 (401)
T 4fdw_A 274 AEVTTYGSTFN--------------------------------------------DDPEAMIHPYCLEGCPKLARFEIP- 308 (401)
T ss_dssp CEEEEESSCCC--------------------------------------------CCTTCEECTTTTTTCTTCCEECCC-
T ss_pred CEEEeCCcccc--------------------------------------------CCcccEECHHHhhCCccCCeEEeC-
Confidence 44444444332 011111223345555566666665
Q ss_pred ccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCC-CcceEecCCCcC
Q 037275 502 NRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLS-FLEYLNLSYNHF 576 (992)
Q Consensus 502 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l 576 (992)
|.++.+...+|.+|.+|+.++|..| ++.+...+|.++ +|+.|++++|.+....+..|..++ +++.|++..|.+
T Consensus 309 ~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 309 ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 3355455556666666666666444 444555666666 666666666666555555555553 556666665543
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=5.5e-15 Score=141.71 Aligned_cols=128 Identities=25% Similarity=0.326 Sum_probs=92.2
Q ss_pred cccccccccccccC-CCCCCccccccccceEEecCCcccCCcCCccCCCCcccEEeccCcccccccCccccccCCCcEEe
Q 037275 147 LKLENLTIADNHLT-GHFPASIGNLSTLERINVLGNGLWGRIPNNLGNLRNLILLNLGENRFSGIVPPSIFNISSLENVF 225 (992)
Q Consensus 147 ~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 225 (992)
++|++|++++|.++ +.+|..+..+++|++|++++|.+.+. ..++.+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56777777777777 66777777778888888888877554 6677778888888888888765666666777777777
Q ss_pred ccCCccCCCCCccccccccccchhhccccccCCCCchhhhccccCceeeecccccccccc---ccccccCccceEecC
Q 037275 226 LPTNRFNGSLPLDIGVSLPKLLGFIVAENNFAGSIPESLSNASNLVELTLFDNQFRGKVS---IYFRSLKNLEWLNLG 300 (992)
Q Consensus 226 l~~N~l~~~~~~~~~~~~~~L~~l~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~ 300 (992)
+++|++++ + ..+..++.+++|++|++++|.+++.++ ..+..+++|++|+++
T Consensus 95 ls~N~i~~-~-----------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKD-L-----------------------STIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCS-H-----------------------HHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCC-h-----------------------HHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 77777662 0 012456777778888888888776665 567777777777765
No 388
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=5.2e-14 Score=157.71 Aligned_cols=198 Identities=11% Similarity=0.084 Sum_probs=147.5
Q ss_pred ceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccC
Q 037275 349 MTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSS 428 (992)
Q Consensus 349 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 428 (992)
|+.+.+.+ .++.+....|.++.+|+.++|++|+++.+...+|. ..+|+.+.|..+ ++.+...+|.++++|+.+++..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 55555553 55556667777777777777777777755555555 467777777644 6656667777777777777776
Q ss_pred CcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeeccccc---
Q 037275 429 NDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFS--- 505 (992)
Q Consensus 429 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--- 505 (992)
| ++.....+|.+ .+|+.+.+ .|.++......|.++++|+.+++.+|.+.
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l--------------------------p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL--------------------------PNGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE--------------------------ETTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred C-ccCcccccccc-CCccEEEe--------------------------CCCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 4 45455556665 56666644 23344355677889999999999998875
Q ss_pred --ccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccC
Q 037275 506 --GEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEV 580 (992)
Q Consensus 506 --~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 580 (992)
.+.+..|.+|.+|+.++|. |.++.+...+|.++++|+.++|.+| ++...+.+|.++ +|+.+++++|.+....
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~ 361 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVF 361 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCC
T ss_pred ccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccc
Confidence 4678899999999999999 4588778899999999999999665 776777899999 9999999999876543
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=2.1e-14 Score=142.17 Aligned_cols=83 Identities=18% Similarity=0.266 Sum_probs=46.8
Q ss_pred CceEeeEEcCCCCeEEEeeccccccCCccCCCCCCCCcCCeeeccCCCCCccCCccccCCCCCCEEEeecccCCCCCCcc
Q 037275 38 CQWTGVTCGHRHQRVTKLDLSNRTIGGTLSPYVGNLSFLRYLNLADNNFHGEIPHQIGRLVRLEALVLANNSFSGKIPTN 117 (992)
Q Consensus 38 c~w~gv~c~~~~~~v~~ldl~~~~l~~~l~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 117 (992)
|+|.+|.|+.. ++ ..+|..+ .++|++|++++|++++..+..|..+++|++|+|++|++++..+..
T Consensus 7 C~~~~l~~~~~------------~l-~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNSK------------GL-TSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCSS------------CC-SSCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecCC------------CC-ccCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 67777777543 23 2344333 256777777777777444445666777777777777766333333
Q ss_pred cccCCCCcEeeccccccc
Q 037275 118 LSRCSNLISFNARRNNLV 135 (992)
Q Consensus 118 l~~l~~L~~L~l~~n~l~ 135 (992)
++.+++|++|++++|+++
T Consensus 72 ~~~l~~L~~L~l~~N~l~ 89 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQ 89 (177)
T ss_dssp TTTCTTCCEEECCSSCCC
T ss_pred ccCCCccCEEECCCCCcc
Confidence 445555544444444444
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=2.6e-16 Score=159.07 Aligned_cols=153 Identities=22% Similarity=0.205 Sum_probs=110.2
Q ss_pred CCCcCCeeeccCCCCCccCCc------cccCCCCCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccc
Q 037275 72 NLSFLRYLNLADNNFHGEIPH------QIGRLVRLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYN 145 (992)
Q Consensus 72 ~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~ 145 (992)
....++.++++.+.+.|.+|. .+..+++|++|+|++|+++ .+| .++.+++|++|++++|+++ .+|..+. .
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~-~ 91 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDA-V 91 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-CCC-CHHHHTTCCEEEEEEEEEC-SCSSHHH-H
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-ccc-ccccCCCCCEEECCCCCcc-cccchhh-c
Confidence 344555666666666655554 7777888888888888877 466 7777788888888888777 6665443 5
Q ss_pred ccccccccccccccCCCCCCccccccccceEEecCCcccCCcC-CccCCCCcccEEeccCcccccccCcc----------
Q 037275 146 WLKLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIP-NNLGNLRNLILLNLGENRFSGIVPPS---------- 214 (992)
Q Consensus 146 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~p~~---------- 214 (992)
+++|++|+|++|++++ +| .+.++++|++|++++|.+.+..+ ..+..+++|++|++++|.+++..|..
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 169 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHH
Confidence 6778888888888875 44 67788888888888888854222 46788888888999888887665542
Q ss_pred ccccCCCcEEeccCCccC
Q 037275 215 IFNISSLENVFLPTNRFN 232 (992)
Q Consensus 215 l~~l~~L~~L~l~~N~l~ 232 (992)
+..+++|++|+ +|.++
T Consensus 170 ~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHCSSCSEEC--CGGGT
T ss_pred HHhCCCcEEEC--CcccC
Confidence 77788888876 55554
No 391
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=1.7e-14 Score=141.44 Aligned_cols=108 Identities=19% Similarity=0.228 Sum_probs=97.0
Q ss_pred ccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcc
Q 037275 472 SLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNN 551 (992)
Q Consensus 472 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 551 (992)
.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 13 ~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 4678888887 5666553 889999999999998889999999999999999999998888888999999999999999
Q ss_pred cCCCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 552 LSGQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 552 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
|++..+..|..+++|++|+|++|+|.|.++.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 9987778899999999999999999999874
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.6e-16 Score=160.51 Aligned_cols=89 Identities=19% Similarity=0.229 Sum_probs=53.5
Q ss_pred cccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCC-ccccccCCCCEEECCCcccCCCChh-----
Q 037275 485 PLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIP-SSLSSLKSIKELDMSSNNLSGQIPE----- 558 (992)
Q Consensus 485 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~----- 558 (992)
|..+..+++|++|+|++|++++ +| .+..+++|+.|+|++|+|++..+ ..+..+++|++|++++|++++..|.
T Consensus 86 ~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~ 163 (198)
T 1ds9_A 86 ENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATS 163 (198)
T ss_dssp SSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHH
T ss_pred cchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchH
Confidence 3334444566666666666664 33 46666666666666666663222 3566667777777777777654443
Q ss_pred -----hhhcCCCcceEecCCCcCc
Q 037275 559 -----YLENLSFLEYLNLSYNHFE 577 (992)
Q Consensus 559 -----~~~~l~~L~~L~l~~N~l~ 577 (992)
.+..+++|++|| +|+++
T Consensus 164 ~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 164 EYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHHHHHCSSCSEEC--CGGGT
T ss_pred HHHHHHHHhCCCcEEEC--CcccC
Confidence 266777777776 56554
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.50 E-value=3.3e-13 Score=152.10 Aligned_cols=238 Identities=14% Similarity=0.139 Sum_probs=120.6
Q ss_pred hhhhccccCceeeeccccccccccccccccCccceEecCCCCCCCCCCCCchhhhhccCCCcceEeecCCCcCCCcCCcc
Q 037275 262 ESLSNASNLVELTLFDNQFRGKVSIYFRSLKNLEWLNLGSNNLGTGEANDLDFLTLLTNCTELTAIGLDDNRFGGVLPHS 341 (992)
Q Consensus 262 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~ 341 (992)
.+|.++.+|+.+.+.++. ..+....|.++.+|+.+.+..| ++.++.. .+.++..|+.+.+..+...
T Consensus 156 ~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~------~F~~~~~L~~i~~~~~~~~------ 221 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDY------CFAECILLENMEFPNSLYY------ 221 (394)
T ss_dssp TTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTT------TTTTCTTCCBCCCCTTCCE------
T ss_pred hhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCch------hhccccccceeecCCCceE------
Confidence 356666667777666543 3355666666677777666554 4444433 2344445554444332211
Q ss_pred cccccccceeEEeeCCccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCcccc
Q 037275 342 IANLSSTMTDIVIAGNQISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLL 421 (992)
Q Consensus 342 ~~~l~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 421 (992)
+...+....+|+.+.+..+. +.+....|.....|+.+.+..+... .....|..+..+
T Consensus 222 ---------------------i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l 278 (394)
T 4fs7_A 222 ---------------------LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGL 278 (394)
T ss_dssp ---------------------ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTC
T ss_pred ---------------------eehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eecccccccccc
Confidence 11112222344444443322 2233344455555555555544333 344445555555
Q ss_pred CceeccCCcccCCCCCCccccccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeec
Q 037275 422 TNLALSSNDLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISV 501 (992)
Q Consensus 422 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 501 (992)
+.+....+.+. ...|..+.+|+.+.+.++ ++..-...|.++.+|+.++|..
T Consensus 279 ~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~--------------------------i~~I~~~aF~~c~~L~~i~lp~ 329 (394)
T 4fs7_A 279 KKVIYGSVIVP---EKTFYGCSSLTEVKLLDS--------------------------VKFIGEEAFESCTSLVSIDLPY 329 (394)
T ss_dssp CEEEECSSEEC---TTTTTTCTTCCEEEECTT--------------------------CCEECTTTTTTCTTCCEECCCT
T ss_pred ceeccCceeec---cccccccccccccccccc--------------------------cceechhhhcCCCCCCEEEeCC
Confidence 55555444322 234455555555433221 1112233455566666666653
Q ss_pred ccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceE
Q 037275 502 NRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYL 569 (992)
Q Consensus 502 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 569 (992)
+ ++.+-..+|.++.+|+.+++..| ++.+...+|.++++|+.+++..| ++ .+..+|.++++|+.+
T Consensus 330 ~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 330 L-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred c-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 3 44455566777777777777665 55455667777777777777544 33 334556666666554
No 394
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=3.5e-14 Score=139.61 Aligned_cols=108 Identities=19% Similarity=0.277 Sum_probs=95.4
Q ss_pred ccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcc
Q 037275 472 SLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNN 551 (992)
Q Consensus 472 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 551 (992)
.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4678888886 6676664 889999999999998889999999999999999999997777778999999999999999
Q ss_pred cCCCChhhhhcCCCcceEecCCCcCcccCCC
Q 037275 552 LSGQIPEYLENLSFLEYLNLSYNHFEGEVPT 582 (992)
Q Consensus 552 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 582 (992)
|++..+..|..+++|++|+|++|+|.|.++.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred cceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 9977777799999999999999999998864
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=1.4e-14 Score=143.27 Aligned_cols=91 Identities=20% Similarity=0.169 Sum_probs=69.7
Q ss_pred ccccCCCCccEEeeecccccccCCcccccccccceeeccCCcccccCCc--cccccCCCCEEECCCcccCCCChh----h
Q 037275 486 LEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPS--SLSSLKSIKELDMSSNNLSGQIPE----Y 559 (992)
Q Consensus 486 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~----~ 559 (992)
..+..+++|++|+|++|++++..+..|..+++|++|+|++|+|+ .+|. .+..+++|+.|+|++|+++ .+|. .
T Consensus 58 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~ 135 (176)
T 1a9n_A 58 DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYV 135 (176)
T ss_dssp CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHH
T ss_pred cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHH
Confidence 35667778888888888888665565678888888888888886 4554 7788888888888888887 4555 3
Q ss_pred hhcCCCcceEecCCCcCcc
Q 037275 560 LENLSFLEYLNLSYNHFEG 578 (992)
Q Consensus 560 ~~~l~~L~~L~l~~N~l~~ 578 (992)
+..+++|++||+++|....
T Consensus 136 ~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 136 IYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp HHHCTTCSEETTEECCHHH
T ss_pred HHHCCccceeCCCcCCHHH
Confidence 7888888888888887653
No 396
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=1.2e-14 Score=143.64 Aligned_cols=133 Identities=17% Similarity=0.250 Sum_probs=75.0
Q ss_pred CCCCCCcCCeeeccCCCCCccCCccccCCC-CCCEEEeecccCCCCCCcccccCCCCcEeecccccccccCChhhccccc
Q 037275 69 YVGNLSFLRYLNLADNNFHGEIPHQIGRLV-RLEALVLANNSFSGKIPTNLSRCSNLISFNARRNNLVGEIPAELGYNWL 147 (992)
Q Consensus 69 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~~l~ 147 (992)
.+.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|++++ + ..++.+++|++|++++|+++ .+|+.++..++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~ 88 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALP 88 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCccc-ccCcchhhcCC
Confidence 3456677777777777777 4554 44444 77777777777773 3 45666666666666666665 34443333444
Q ss_pred ccccccccccccCCCCCCccccccccceEEecCCcccCCcCC--ccCCCCcccEEeccCcccccccCcc----ccccCCC
Q 037275 148 KLENLTIADNHLTGHFPASIGNLSTLERINVLGNGLWGRIPN--NLGNLRNLILLNLGENRFSGIVPPS----IFNISSL 221 (992)
Q Consensus 148 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~--~l~~l~~L~~L~L~~n~l~~~~p~~----l~~l~~L 221 (992)
+|++|+|++|.++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|
T Consensus 89 ~L~~L~L~~N~i~-------------------------~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L 142 (176)
T 1a9n_A 89 DLTELILTNNSLV-------------------------ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQV 142 (176)
T ss_dssp TCCEEECCSCCCC-------------------------CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTC
T ss_pred CCCEEECCCCcCC-------------------------cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcc
Confidence 4444444444443 3333 4455555555555555555 23432 5555566
Q ss_pred cEEeccCCccC
Q 037275 222 ENVFLPTNRFN 232 (992)
Q Consensus 222 ~~L~l~~N~l~ 232 (992)
++|+++.|.+.
T Consensus 143 ~~Ld~~~n~~~ 153 (176)
T 1a9n_A 143 RVLDFQKVKLK 153 (176)
T ss_dssp SEETTEECCHH
T ss_pred ceeCCCcCCHH
Confidence 66666555543
No 397
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.48 E-value=6.9e-13 Score=149.50 Aligned_cols=149 Identities=11% Similarity=0.144 Sum_probs=85.1
Q ss_pred cCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCcccc
Q 037275 363 IPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNC 442 (992)
Q Consensus 363 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 442 (992)
....|..+.+|+.+.+..+... +....|.....++.+....+.+. ...|..+.+|+.+.+.++ ++.....+|.++
T Consensus 245 ~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c 319 (394)
T 4fs7_A 245 GKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESC 319 (394)
T ss_dssp CSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTC
T ss_pred ccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCC
Confidence 3445566666666666655443 45556666666666666555432 345666666666666544 444555566666
Q ss_pred ccccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceee
Q 037275 443 KNLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLY 522 (992)
Q Consensus 443 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 522 (992)
.+|+.+.+.++ + +..-...|.++.+|+.+++..| ++.+...+|.++.+|+.++
T Consensus 320 ~~L~~i~lp~~-v-------------------------~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 320 TSLVSIDLPYL-V-------------------------EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVE 372 (394)
T ss_dssp TTCCEECCCTT-C-------------------------CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEE
T ss_pred CCCCEEEeCCc-c-------------------------cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEE
Confidence 66666644321 1 1122345566666666666655 5545566677777777777
Q ss_pred ccCCcccccCCccccccCCCCEE
Q 037275 523 LQGNSFSGSIPSSLSSLKSIKEL 545 (992)
Q Consensus 523 L~~N~l~~~~~~~~~~l~~L~~L 545 (992)
+..+ ++ .+..+|.+.++|+.+
T Consensus 373 lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 373 LPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp EEGG-GG-GGGGGBCTTCEEEEE
T ss_pred ECCC-CE-EhhheecCCCCCcEE
Confidence 7654 22 234556666666543
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=2.6e-13 Score=132.91 Aligned_cols=109 Identities=22% Similarity=0.258 Sum_probs=98.2
Q ss_pred CccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecC
Q 037275 493 NLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLS 572 (992)
Q Consensus 493 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 572 (992)
..+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999999 4666553 789999999999998889999999999999999999998888889999999999999
Q ss_pred CCcCcccCCC-CCccCCcccccccCCCCcCCCC
Q 037275 573 YNHFEGEVPT-KGVFSNKTGISLSGNGKVCGGL 604 (992)
Q Consensus 573 ~N~l~~~~~~-~~~~~~~~~~~l~~N~~~C~~~ 604 (992)
+|+|++.++. ...++.++.+++.+|++.|.|+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999998775 5678899999999999999875
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=4.7e-13 Score=131.50 Aligned_cols=108 Identities=23% Similarity=0.292 Sum_probs=97.3
Q ss_pred ccEEeeecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCC
Q 037275 494 LVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSY 573 (992)
Q Consensus 494 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 573 (992)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999998 6676664 7999999999999998899999999999999999999987777789999999999999
Q ss_pred CcCcccCCC-CCccCCcccccccCCCCcCCCC
Q 037275 574 NHFEGEVPT-KGVFSNKTGISLSGNGKVCGGL 604 (992)
Q Consensus 574 N~l~~~~~~-~~~~~~~~~~~l~~N~~~C~~~ 604 (992)
|+|++.++. ...++.++.+++.+|++.|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 999988775 5668899999999999999874
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=2.4e-13 Score=150.59 Aligned_cols=130 Identities=18% Similarity=0.134 Sum_probs=109.6
Q ss_pred cccccc-cccCcccccccCCCCccEEeeec-ccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCc
Q 037275 473 LDLSYN-LLSGTLPLEVGNLKNLVYFNISV-NRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSN 550 (992)
Q Consensus 473 L~l~~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 550 (992)
++.+++ .++ .+|. +..+++|++|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 477777 787 5777 99999999999996 9999888899999999999999999999999999999999999999999
Q ss_pred ccCCCChhhhhcCCCcceEecCCCcCcccCCCCCccCCc--ccccccCCCCcCCCCC
Q 037275 551 NLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGVFSNK--TGISLSGNGKVCGGLD 605 (992)
Q Consensus 551 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~--~~~~l~~N~~~C~~~~ 605 (992)
+|++..+..|..++ |+.|+|++|+|.|.|...+...++ ....+..+...|..|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 99977777777776 999999999999988754332222 2334556778888765
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=3.9e-14 Score=157.18 Aligned_cols=135 Identities=16% Similarity=0.078 Sum_probs=64.6
Q ss_pred CCCCCEEEeecccCCCCCCcccccC-----CCCcEeecccccccccCChhhcccccccccccccccccCCCCCCccc---
Q 037275 97 LVRLEALVLANNSFSGKIPTNLSRC-----SNLISFNARRNNLVGEIPAELGYNWLKLENLTIADNHLTGHFPASIG--- 168 (992)
Q Consensus 97 l~~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~L~l~~n~l~~~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~--- 168 (992)
+++|++|+|++|.++......+... ++|+.|+|++|+++......+...+++|++|+|++|.++......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3556777777777663333333322 56666666666665444444444455566666666665533222221
Q ss_pred --cccccceEEecCCcccC----CcCCccCCCCcccEEeccCcccccc----cCccccccCCCcEEeccCCcc
Q 037275 169 --NLSTLERINVLGNGLWG----RIPNNLGNLRNLILLNLGENRFSGI----VPPSIFNISSLENVFLPTNRF 231 (992)
Q Consensus 169 --~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~l~~N~l 231 (992)
..++|++|+|++|.+.. .++..+..+++|++|+|++|.|++. ++..+...++|++|+|++|.|
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i 223 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGA 223 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCC
Confidence 23445555555555422 1222233444455555555554421 122333344444444444444
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.24 E-value=1.5e-10 Score=130.24 Aligned_cols=42 Identities=12% Similarity=0.328 Sum_probs=17.7
Q ss_pred CcccccccccceeeccCCcccccCCccccccCCCCEEECCCcc
Q 037275 509 PVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNN 551 (992)
Q Consensus 509 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 551 (992)
..+|.++.+|+.+.+..+ ++.+...+|.++++|+.+++.+|.
T Consensus 327 ~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 327 DDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred HhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 334444444444444332 332333444444444444444443
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.24 E-value=3.8e-13 Score=149.24 Aligned_cols=160 Identities=18% Similarity=0.177 Sum_probs=107.2
Q ss_pred CCCCcEEeccCccccccCCCCCCC-----ccccCceeccCCcccCCCCCCc-cccccccccccccccccccCchhhhhhc
Q 037275 394 LKNLQLLYLDSNFLAGGIPTSLGN-----LTLLTNLALSSNDLQGSIPPSL-GNCKNLIELHMADIELTGALPPQILSIS 467 (992)
Q Consensus 394 l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~p~~~~~~~ 467 (992)
+++|+.|+|++|.|+......+.. .++|+.|+|++|.|+......+ ..+++|+.|+|++|.++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~----------- 139 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG----------- 139 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC-----------
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC-----------
Confidence 456888888888887433322222 2578888888887763222222 23455666655555544
Q ss_pred ccccccccccccccCcccccc-----cCCCCccEEeeeccccccc----CCcccccccccceeeccCCccccc----CCc
Q 037275 468 TLSLSLDLSYNLLSGTLPLEV-----GNLKNLVYFNISVNRFSGE----IPVTLSACTSLQQLYLQGNSFSGS----IPS 534 (992)
Q Consensus 468 ~~~~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~ 534 (992)
......+ ...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++. ++.
T Consensus 140 --------------~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 140 --------------PEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp --------------HHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 2222222 2356899999999998742 344456788899999999998753 356
Q ss_pred cccccCCCCEEECCCcccCCC----ChhhhhcCCCcceEecCCCcCcc
Q 037275 535 SLSSLKSIKELDMSSNNLSGQ----IPEYLENLSFLEYLNLSYNHFEG 578 (992)
Q Consensus 535 ~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~ 578 (992)
.+...++|++|+|++|+|++. ++..+...++|++|||++|+++.
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 677788999999999999753 33445567899999999998864
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=1.6e-11 Score=135.88 Aligned_cols=133 Identities=18% Similarity=0.165 Sum_probs=97.8
Q ss_pred CceeccCC-cccCCCCCCccccccccccccccccccccCchhhhhhccccccccccc-ccccCcccccccCCCCccEEee
Q 037275 422 TNLALSSN-DLQGSIPPSLGNCKNLIELHMADIELTGALPPQILSISTLSLSLDLSY-NLLSGTLPLEVGNLKNLVYFNI 499 (992)
Q Consensus 422 ~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~-N~l~~~~~~~~~~l~~L~~L~L 499 (992)
..++++++ +|+ .+|. +..+++|+.| +|++ |.|++..+..|.++++|++|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L-------------------------~l~~~n~l~~~~~~~~~~l~~L~~L~l 63 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTEL-------------------------YIENQQHLQHLELRDLRGLGELRNLTI 63 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEE-------------------------ECCSCSSCCEECGGGSCSCCCCSEEEC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEE-------------------------EccCCCCCCCcChhHhccccCCCEEEC
Confidence 34677776 777 4666 7777777777 4443 5555455677888999999999
Q ss_pred ecccccccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccCCCCh-hhhhcCCCcceEecCCCcCcc
Q 037275 500 SVNRFSGEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLSGQIP-EYLENLSFLEYLNLSYNHFEG 578 (992)
Q Consensus 500 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~ 578 (992)
++|+|++.+|..|.++++|+.|+|++|+|++..+..|..++ |+.|+|++|.+...-. .+|..+.......+..+.+.|
T Consensus 64 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C 142 (347)
T 2ifg_A 64 VKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQC 142 (347)
T ss_dssp CSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCC
T ss_pred CCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCC
Confidence 99999988888999999999999999999976666676666 9999999999973222 334433334445566678888
Q ss_pred cCCC
Q 037275 579 EVPT 582 (992)
Q Consensus 579 ~~~~ 582 (992)
..|.
T Consensus 143 ~~~~ 146 (347)
T 2ifg_A 143 HGQG 146 (347)
T ss_dssp SSSS
T ss_pred CCCh
Confidence 7665
No 405
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.20 E-value=4.3e-11 Score=126.71 Aligned_cols=147 Identities=17% Similarity=0.130 Sum_probs=112.7
Q ss_pred HHHHhcCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-CCcceeEEEEeecccccC
Q 037275 674 LSKATNDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR-HRNLIKIITICSSIDFKG 752 (992)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 752 (992)
+......|++...++.|+.+.||++.. .++.+++|+...........+.+|+.+++.+. +..+.++++++..
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----- 81 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH----- 81 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----
Confidence 445567888888999999999999986 36889999986432233456889999999994 6778888887543
Q ss_pred cceEEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcC-------------------------
Q 037275 753 VDFQAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHC------------------------- 807 (992)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------- 807 (992)
.+..++||||++|.++.+.+.. ......++.+++++++.||+..
T Consensus 82 ~~~~~lv~e~i~G~~l~~~~~~-----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (263)
T 3tm0_A 82 DGWSNLLMSEADGVLCSEEYED-----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL 150 (263)
T ss_dssp TTEEEEEEECCSSEEHHHHCCT-----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred CCceEEEEEecCCeehhhccCC-----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence 3456899999999998876321 1123467889999999999810
Q ss_pred -------------------------------CCCeEeccCCCCCeeeCCCCcEEEeecccce
Q 037275 808 -------------------------------QPPVVHGDLKPSNVLLDQDLVAHLGDFGLAK 838 (992)
Q Consensus 808 -------------------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (992)
.+.++|||++|.||+++++..+.|+||+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876667799999775
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.19 E-value=1.3e-09 Score=122.61 Aligned_cols=84 Identities=12% Similarity=0.154 Sum_probs=43.2
Q ss_pred ccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccc
Q 037275 362 IIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGN 441 (992)
Q Consensus 362 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 441 (992)
+...+|.++.+|+.+.+..+... +...+|.++.+|+.+.+. +.++.....+|.++++|+.++|..+ ++.....+|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 44455666666666666554433 445555566666666654 3344344445555555555555433 33333444444
Q ss_pred ccccccc
Q 037275 442 CKNLIEL 448 (992)
Q Consensus 442 l~~L~~L 448 (992)
+.+|+.+
T Consensus 333 C~~L~~i 339 (394)
T 4gt6_A 333 CEQLERI 339 (394)
T ss_dssp CTTCCEE
T ss_pred CCCCCEE
Confidence 4444444
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.95 E-value=5.6e-10 Score=118.01 Aligned_cols=137 Identities=15% Similarity=0.098 Sum_probs=96.8
Q ss_pred cCCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCc--ceeEEEEeecccccCcceE
Q 037275 679 NDFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRN--LIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~ 756 (992)
..|.+..+.+.|..+.||++... +|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++.. ..+..
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~-----~~~~~ 90 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVT-----EAGRD 90 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE-----CSSCE
T ss_pred CCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEecc-----CCCCC
Confidence 34554444446667999999763 6778999997533 3356789999999996544 455777643 23446
Q ss_pred EEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcC-----------------------------
Q 037275 757 AIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHC----------------------------- 807 (992)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~----------------------------- 807 (992)
++||||++|.++. ... .+ ...++.++++.|+.||+..
T Consensus 91 ~~v~e~i~G~~l~--~~~---------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
T 1nd4_A 91 WLLLGEVPGQDLL--SSH---------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQD 156 (264)
T ss_dssp EEEEECCSSEETT--TSC---------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTT
T ss_pred EEEEEecCCcccC--cCc---------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccch
Confidence 9999999998884 211 11 1246677788888888641
Q ss_pred --------------------------CCCeEeccCCCCCeeeCCCCcEEEeecccce
Q 037275 808 --------------------------QPPVVHGDLKPSNVLLDQDLVAHLGDFGLAK 838 (992)
Q Consensus 808 --------------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (992)
.+.++|||++|.||++++++.+.|+|||.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 157 DLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp SCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999875
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.93 E-value=3.6e-08 Score=110.26 Aligned_cols=163 Identities=14% Similarity=0.113 Sum_probs=83.3
Q ss_pred CCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccccccccc
Q 037275 370 LVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCKNLIELH 449 (992)
Q Consensus 370 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 449 (992)
...+..+.+..+.-. .....+....+|+.+.+..+ ++.....+|.++..|+.+.+..+ ++.....+|.++.+|+.+.
T Consensus 193 ~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 193 AKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 334444444333222 33444555556666665443 33244455556666666666544 4434445555555555553
Q ss_pred cccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeeccCCccc
Q 037275 450 MADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNSFS 529 (992)
Q Consensus 450 l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 529 (992)
+..+ ++......|.++.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++
T Consensus 270 l~~~--------------------------i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~ 322 (379)
T 4h09_A 270 FYAK--------------------------VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK 322 (379)
T ss_dssp ECCC--------------------------CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC
T ss_pred cccc--------------------------ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc
Confidence 3221 11122234555666666666666665555566666666666666543 44
Q ss_pred ccCCccccccCCCCEEECCCcccCCCChhhhhcC
Q 037275 530 GSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENL 563 (992)
Q Consensus 530 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 563 (992)
.+...+|.++.+|+.+.+..+ ++.....+|.++
T Consensus 323 ~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 323 TIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred EEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 344556666666666666543 443334445443
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=4.4e-10 Score=123.31 Aligned_cols=180 Identities=12% Similarity=0.138 Sum_probs=98.1
Q ss_pred CeEEEeeccccccCC--------ccCCCCCCCCcCCeeeccCCCCC---------ccCCccccCCCCCCEEEeecccCCC
Q 037275 50 QRVTKLDLSNRTIGG--------TLSPYVGNLSFLRYLNLADNNFH---------GEIPHQIGRLVRLEALVLANNSFSG 112 (992)
Q Consensus 50 ~~v~~ldl~~~~l~~--------~l~~~l~~l~~L~~L~L~~n~l~---------~~~p~~~~~l~~L~~L~Ls~n~l~~ 112 (992)
.+|+.|.+......+ .+.+++..+++|+.|.+.++... +.++..+..+++|+.|.|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 356677766554432 13445667888999988765432 234455677888999999887311
Q ss_pred CCCcccccCCCCcEeecccccccccCChhhcc-cccccccccccc--cccCCC-----CCCcc--ccccccceEEecCCc
Q 037275 113 KIPTNLSRCSNLISFNARRNNLVGEIPAELGY-NWLKLENLTIAD--NHLTGH-----FPASI--GNLSTLERINVLGNG 182 (992)
Q Consensus 113 ~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~-~l~~L~~L~L~~--n~l~~~-----~p~~~--~~l~~L~~L~l~~n~ 182 (992)
.+|. + .+++|++|++..|.+.......+.. .+++|++|+|+. |...+. +...+ ..+++|++|+|.+|.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 3343 3 3778888888888776444334432 467777777753 221111 00111 234566666666665
Q ss_pred ccCCcCCcc---CCCCcccEEeccCcccccc----cCccccccCCCcEEeccCCccC
Q 037275 183 LWGRIPNNL---GNLRNLILLNLGENRFSGI----VPPSIFNISSLENVFLPTNRFN 232 (992)
Q Consensus 183 l~~~~~~~l---~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~l~~N~l~ 232 (992)
+....+..+ ..+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 532222111 1345566666666655532 2233344555555555555444
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.88 E-value=7e-10 Score=121.72 Aligned_cols=183 Identities=15% Similarity=0.159 Sum_probs=110.4
Q ss_pred ccCCCcccEEEccCCcCC---------CCCCccccCCCCCcEEeccCcc-ccccCCCCCCCccccCceeccCCcccCCCC
Q 037275 367 IRNLVNLVELCMDDNKLT---------GTIPHAIGELKNLQLLYLDSNF-LAGGIPTSLGNLTLLTNLALSSNDLQGSIP 436 (992)
Q Consensus 367 ~~~l~~L~~L~L~~N~l~---------~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 436 (992)
...+++|+.|.+..+... +.+...+..+++|+.|+|++|. +. ++. + .+++|+.|+|..|.++....
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVV 210 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHH
Confidence 445667777777554321 1233455667888888888773 32 232 3 36788888888777763322
Q ss_pred CCcc--ccccccccccccc--cccccCchhhhhhcccccccccccccccCcccccc--cCCCCccEEeeecccccccCCc
Q 037275 437 PSLG--NCKNLIELHMADI--ELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEV--GNLKNLVYFNISVNRFSGEIPV 510 (992)
Q Consensus 437 ~~~~--~l~~L~~L~l~~n--~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~~~ 510 (992)
..+. .+++|+.|.|+.+ ...+. ..+. .+...+ ..+++|++|+|++|.+.+..+.
T Consensus 211 ~~l~~~~lp~L~~L~L~~~~~~~~~~-------------------~~~~-~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 211 EDILGSDLPNLEKLVLYVGVEDYGFD-------------------GDMN-VFRPLFSKDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp HHHHHSBCTTCCEEEEECBCGGGTCC-------------------SCGG-GTGGGSCTTTCTTCCEEEEESCTTHHHHHH
T ss_pred HHHHHccCCCCcEEEEeccccccccc-------------------hhHH-HHHHHHhcCCCCCcCEEeCCCCCCchHHHH
Confidence 2232 5677777766421 11100 0000 000111 3578899999999988754333
Q ss_pred ccc---cccccceeeccCCccccc----CCccccccCCCCEEECCCcccCCCChhhhhc-CCCcceEecCCCc
Q 037275 511 TLS---ACTSLQQLYLQGNSFSGS----IPSSLSSLKSIKELDMSSNNLSGQIPEYLEN-LSFLEYLNLSYNH 575 (992)
Q Consensus 511 ~~~---~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~ 575 (992)
.+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+.. + ...+++++|+
T Consensus 271 ~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 333 477899999999988863 3444567788999999999887544444443 2 3557888776
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.83 E-value=1.7e-07 Score=104.65 Aligned_cols=147 Identities=14% Similarity=0.121 Sum_probs=83.7
Q ss_pred CCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccCccccccCCCCCCCccccCceeccCCcccCCCCCCccccc
Q 037275 364 PTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDSNFLAGGIPTSLGNLTLLTNLALSSNDLQGSIPPSLGNCK 443 (992)
Q Consensus 364 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 443 (992)
...+....+|+.+.+..+ +..+...+|.....|+.+.+..+ ++.....+|.++.+|+.+.+..+ +......+|.++.
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 344555556666665443 22244555666666666666554 44344556666666666666543 4434455666666
Q ss_pred cccccccccccccccCchhhhhhcccccccccccccccCcccccccCCCCccEEeeecccccccCCcccccccccceeec
Q 037275 444 NLIELHMADIELTGALPPQILSISTLSLSLDLSYNLLSGTLPLEVGNLKNLVYFNISVNRFSGEIPVTLSACTSLQQLYL 523 (992)
Q Consensus 444 ~L~~L~l~~n~l~~~~p~~~~~~~~~~~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 523 (992)
+|+.+.+.++.++ ..-...|.++.+|+.+.|..+ ++.+-..+|.++.+|+.+.+
T Consensus 287 ~L~~i~l~~~~i~-------------------------~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 287 NLTKVVMDNSAIE-------------------------TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TCCEEEECCTTCC-------------------------EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ccccccccccccc-------------------------eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 6666644444333 122344556666777766544 54455667777778887777
Q ss_pred cCCcccccCCccccccC
Q 037275 524 QGNSFSGSIPSSLSSLK 540 (992)
Q Consensus 524 ~~N~l~~~~~~~~~~l~ 540 (992)
..+ ++.+...+|.+..
T Consensus 341 p~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 341 PKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CTT-CCEECTTTTTTSS
T ss_pred CCc-cCEEchhHhhCCC
Confidence 655 5545566676653
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.81 E-value=7.1e-09 Score=114.99 Aligned_cols=145 Identities=14% Similarity=0.209 Sum_probs=105.6
Q ss_pred CCCccccccceEEEEeEECCCCeEEEEEEee--ccC-CCchhHHHHHHHHHHhcc--CCcceeEEEEeecccccCcceEE
Q 037275 683 SSNMIGQGSFGFVYKGNLGENGMMVAVKVIN--LKQ-KGASNGFVAECQALRNIR--HRNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~ 757 (992)
.++.++.|.++.||++... +..+++|+.. ... ......+.+|+.+++.+. +..+.++++++.+... .+..+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~--~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV--IGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT--TSSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc--cCCeE
Confidence 4567899999999999874 4678888775 322 122356889999999996 4557888888654321 23458
Q ss_pred EEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcC------------------------------
Q 037275 758 IVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHC------------------------------ 807 (992)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------ 807 (992)
+||||++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~--------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS--------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLS 189 (359)
T ss_dssp EEEECCCCBCCCCTT--------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCc--------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhc
Confidence 999999987774311 113677888889999999999999731
Q ss_pred -------------------------CCCeEeccCCCCCeeeCCCCc--EEEeeccccee
Q 037275 808 -------------------------QPPVVHGDLKPSNVLLDQDLV--AHLGDFGLAKF 839 (992)
Q Consensus 808 -------------------------~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 839 (992)
.+.++|||++|.||+++.++. +.|+||+.+..
T Consensus 190 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 190 ETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999987753 68999998874
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.78 E-value=4.3e-09 Score=113.73 Aligned_cols=195 Identities=15% Similarity=0.148 Sum_probs=122.3
Q ss_pred CCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-CCc--ceeEEEEeecccccCcceEEEEE
Q 037275 684 SNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR-HRN--LIKIITICSSIDFKGVDFQAIVY 760 (992)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~~~~~~~~~lv~ 760 (992)
++.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++.+.... ......++||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~--~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS--ETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC--SSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC--CCCCcceEEE
Confidence 4678999999999875 34889986422 33567889999999883 332 34555443221 1112347899
Q ss_pred EeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 037275 761 EYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHC--------------------------------- 807 (992)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--------------------------------- 807 (992)
|+++|.++.+... ..++..++..++.+++..++.||+..
T Consensus 96 ~~i~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 96 TKIKGVPLTPLLL--------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp ECCCCEECCHHHH--------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred cccCCeECCcccc--------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 9999988865432 13677777888888888888888610
Q ss_pred ----------------------CCCeEeccCCCCCeeeCC--CCcEEEeecccceecCCCCCCCCcccCC---CC----C
Q 037275 808 ----------------------QPPVVHGDLKPSNVLLDQ--DLVAHLGDFGLAKFLSSSPLDTAVETPS---SS----K 856 (992)
Q Consensus 808 ----------------------~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~---~~----~ 856 (992)
.+.++|+|++|.||++++ +..+.++||+.+..-... .+-...... .. .
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl~~~~~~~~~~~~~~~~ 246 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDFISLMEDDEEYGMEFVS 246 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHHHTTCCTTTSCCHHHHH
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHHHHHHhhccccCHHHHH
Confidence 245899999999999988 557889999998754321 000000000 00 0
Q ss_pred cccccccccc-cccccCCCcCcccchhhHHHHHHHHHhCCCCC
Q 037275 857 GIKGTVGYIA-PEYGMGGEASMTGDVYSFGILLLEMFTRRRPT 898 (992)
Q Consensus 857 ~~~gt~~y~a-PE~~~~~~~~~~~DiwSlG~il~elltg~~pf 898 (992)
......++.. |+... ......+.|++|.++|.+.+|+.+|
T Consensus 247 ~~l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 247 KILNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 0000001111 22211 1122358999999999999998765
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.74 E-value=5e-10 Score=116.17 Aligned_cols=98 Identities=19% Similarity=0.159 Sum_probs=52.8
Q ss_pred CCceEeeEEcCCCCeEEEeeccc---cccCCccCC-C-----------------------CCCCCcCCe--eeccCCCCC
Q 037275 37 LCQWTGVTCGHRHQRVTKLDLSN---RTIGGTLSP-Y-----------------------VGNLSFLRY--LNLADNNFH 87 (992)
Q Consensus 37 ~c~w~gv~c~~~~~~v~~ldl~~---~~l~~~l~~-~-----------------------l~~l~~L~~--L~L~~n~l~ 87 (992)
.|.|.|+.|+..+.+|..+...+ ..+.+.+++ . +...+.|+. ++++.|...
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 58899999998777886665544 233333321 1 222223333 444444322
Q ss_pred ccCCcc----ccCCCCCCEEEeecccCCC--CCCcccccCCCCcEeeccccccc
Q 037275 88 GEIPHQ----IGRLVRLEALVLANNSFSG--KIPTNLSRCSNLISFNARRNNLV 135 (992)
Q Consensus 88 ~~~p~~----~~~l~~L~~L~Ls~n~l~~--~~p~~l~~l~~L~~L~l~~n~l~ 135 (992)
.++.. ...+++|++|+||+|+|++ .+|..++.+++|+.|+|++|+++
T Consensus 157 -~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 157 -CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp -HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred -HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 22211 1345666666666666664 34455556666666666666655
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.53 E-value=2.6e-08 Score=103.29 Aligned_cols=80 Identities=25% Similarity=0.387 Sum_probs=50.5
Q ss_pred cCCCCccEEeeecccccc--cCCcccccccccceeeccCCcccccCCccccccC--CCCEEECCCcccCCCCh-------
Q 037275 489 GNLKNLVYFNISVNRFSG--EIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLK--SIKELDMSSNNLSGQIP------- 557 (992)
Q Consensus 489 ~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p------- 557 (992)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 456677777777777776 3345566677777777777777654 3344444 67777777777765444
Q ss_pred hhhhcCCCcceEe
Q 037275 558 EYLENLSFLEYLN 570 (992)
Q Consensus 558 ~~~~~l~~L~~L~ 570 (992)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2355666666664
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.44 E-value=6.2e-07 Score=97.36 Aligned_cols=136 Identities=14% Similarity=0.153 Sum_probs=99.4
Q ss_pred CCCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccC----CcceeEEEEeecccccCcce
Q 037275 680 DFSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRH----RNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~~ 755 (992)
.+...+.++.|....||++ +..+++|+... ......+.+|..+++.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 6667788999999999998 45688897632 2224568899999999865 224455544 12
Q ss_pred EEEEEEeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCC---------------------------
Q 037275 756 QAIVYEYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQ--------------------------- 808 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~--------------------------- 808 (992)
.++||||++|.++.+... ..++..++..++.+++..++.||+...
T Consensus 102 ~~lvme~i~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQY--------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS 173 (320)
T ss_dssp SCEEEECCCCBCCCHHHH--------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred cEEEEeecCCcccccccc--------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence 389999999988864331 125666667778888888888885421
Q ss_pred ---------------------------------CCeEeccCCCCCeeeCCCCcEEEeeccccee
Q 037275 809 ---------------------------------PPVVHGDLKPSNVLLDQDLVAHLGDFGLAKF 839 (992)
Q Consensus 809 ---------------------------------~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (992)
+.++|+|++|.||+++.+..+.|+||+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2459999999999999876789999998864
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=1.5e-08 Score=100.24 Aligned_cols=46 Identities=13% Similarity=0.066 Sum_probs=27.2
Q ss_pred cCCCCCCCCcCCeeeccCC-CCCcc----CCccccCCCCCCEEEeecccCC
Q 037275 66 LSPYVGNLSFLRYLNLADN-NFHGE----IPHQIGRLVRLEALVLANNSFS 111 (992)
Q Consensus 66 l~~~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~Ls~n~l~ 111 (992)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|+|.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 3344556666777777776 66532 3344455566666666666665
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.29 E-value=3.1e-06 Score=89.75 Aligned_cols=76 Identities=14% Similarity=0.147 Sum_probs=59.9
Q ss_pred CCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCC---cceeEEEEeecccccCcceEEEE
Q 037275 683 SSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHR---NLIKIITICSSIDFKGVDFQAIV 759 (992)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv 759 (992)
..+.|+.|.++.||+++.. +|+.++||+...........+..|++.++.+.+. .+.+++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 3568999999999999875 7889999997543333456789999999999765 577887762 13899
Q ss_pred EEeccCCCH
Q 037275 760 YEYMQNGSL 768 (992)
Q Consensus 760 ~e~~~~gsL 768 (992)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999998864
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.27 E-value=1.8e-07 Score=92.44 Aligned_cols=93 Identities=23% Similarity=0.266 Sum_probs=69.5
Q ss_pred cccccCCCCccEEeeeccccccc----CCcccccccccceeeccCCccccc----CCccccccCCCCEEEC--CCcccCC
Q 037275 485 PLEVGNLKNLVYFNISVNRFSGE----IPVTLSACTSLQQLYLQGNSFSGS----IPSSLSSLKSIKELDM--SSNNLSG 554 (992)
Q Consensus 485 ~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~ 554 (992)
...+...++|++|+|++|.|... +...+...++|++|+|++|.|++. +...+...++|++|+| ++|.|+.
T Consensus 58 ~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 58 AEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 34455677899999999988742 334455567899999999998853 4566777788999999 8899875
Q ss_pred C----ChhhhhcCCCcceEecCCCcCc
Q 037275 555 Q----IPEYLENLSFLEYLNLSYNHFE 577 (992)
Q Consensus 555 ~----~p~~~~~l~~L~~L~l~~N~l~ 577 (992)
. +...+...++|++|+|++|.+.
T Consensus 138 ~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 138 NVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3 3345566688999999998875
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=3.3e-06 Score=89.29 Aligned_cols=135 Identities=18% Similarity=0.115 Sum_probs=96.7
Q ss_pred ccccccce-EEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-CCcceeEEEEeecccccCcceEEEEEEec
Q 037275 686 MIGQGSFG-FVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR-HRNLIKIITICSSIDFKGVDFQAIVYEYM 763 (992)
Q Consensus 686 ~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 763 (992)
.+..|..+ .||+......+..+++|+.... ....+.+|...++.+. +--+.++++++.+ .+..++|||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-----~~~~~lvme~l 102 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-----PDDAWLLTTAI 102 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-----TTEEEEEEECC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-----CCeEEEEEEee
Confidence 44555555 7999888767788999986522 3556889999999884 3336677777543 24569999999
Q ss_pred cCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 037275 764 QNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHC------------------------------------ 807 (992)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~------------------------------------ 807 (992)
+|.++.+...... .....++.+++..|+.||...
T Consensus 103 ~G~~~~~~~~~~~----------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 103 PGKTAFQVLEEYP----------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp CSEEHHHHHHHCG----------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred CCccccccccCCH----------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 9988887654322 122346667777777777531
Q ss_pred -------------------CCCeEeccCCCCCeeeCCCCcEEEeecccce
Q 037275 808 -------------------QPPVVHGDLKPSNVLLDQDLVAHLGDFGLAK 838 (992)
Q Consensus 808 -------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (992)
.+.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237999999999999988777899999875
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.18 E-value=7.1e-06 Score=88.19 Aligned_cols=137 Identities=17% Similarity=0.183 Sum_probs=90.3
Q ss_pred CCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCC---cceeEEEEeecccccCcceEEEEE
Q 037275 684 SNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHR---NLIKIITICSSIDFKGVDFQAIVY 760 (992)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv~ 760 (992)
++.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+.+++.++. ...+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEEEE
Confidence 456888999999988 3568888852 222346789999999999642 3556666643 1234458999
Q ss_pred EeccCCCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhc----------------------------------
Q 037275 761 EYMQNGSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHH---------------------------------- 806 (992)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---------------------------------- 806 (992)
||++|.++.+.... .++..+...++.++++.|+.||+.
T Consensus 93 e~i~G~~l~~~~~~--------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l 164 (306)
T 3tdw_A 93 RKVQGQILGEDGMA--------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL 164 (306)
T ss_dssp ECCCSEECHHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred eccCCeECchhhhh--------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence 99999887663211 123333344444444444444432
Q ss_pred -----------------------CCCCeEeccCCCCCeeeCC---CCc-EEEeeccccee
Q 037275 807 -----------------------CQPPVVHGDLKPSNVLLDQ---DLV-AHLGDFGLAKF 839 (992)
Q Consensus 807 -----------------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~Dfg~a~~ 839 (992)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2336799999999999987 455 58999998763
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.03 E-value=1.3e-05 Score=88.10 Aligned_cols=78 Identities=13% Similarity=0.165 Sum_probs=56.0
Q ss_pred CCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCc--ceeEEEEeecccccCcceEEE
Q 037275 681 FSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRN--LIKIITICSSIDFKGVDFQAI 758 (992)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~l 758 (992)
....+.++.|....+|+... ++..+++|+.... ..+.+|+.+++.+.... +.++++++... ....++
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~----~g~~~l 111 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFS----ESLTYC 111 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESS----SSCEEE
T ss_pred CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCC----CCCeEE
Confidence 34456789999999999986 5789999987421 35889999999986433 45666654331 145689
Q ss_pred EEEeccCCCHH
Q 037275 759 VYEYMQNGSLE 769 (992)
Q Consensus 759 v~e~~~~gsL~ 769 (992)
||||++|.++.
T Consensus 112 v~e~l~G~~l~ 122 (362)
T 3ovc_A 112 ISRRAQGVTLQ 122 (362)
T ss_dssp EEECCCSEETT
T ss_pred EEEecCCCCcc
Confidence 99999876553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.01 E-value=1.1e-05 Score=89.21 Aligned_cols=84 Identities=7% Similarity=-0.003 Sum_probs=55.8
Q ss_pred CCcc-ccccceEEEEeEEC--C----CCeEEEEEEeeccC---CCchhHHHHHHHHHHhcc-C--CcceeEEEEeecccc
Q 037275 684 SNMI-GQGSFGFVYKGNLG--E----NGMMVAVKVINLKQ---KGASNGFVAECQALRNIR-H--RNLIKIITICSSIDF 750 (992)
Q Consensus 684 ~~~l-g~G~~g~V~~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~ 750 (992)
.+.| +.|....+|++... . +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++.+...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998763 0 16688999875332 112356788999999884 3 356778877543221
Q ss_pred cCcceEEEEEEeccCCCHH
Q 037275 751 KGVDFQAIVYEYMQNGSLE 769 (992)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~ 769 (992)
....++||||++|.++.
T Consensus 105 --~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 --LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp --TSSCEEEEECCCCBCCC
T ss_pred --cCCceEEEEecCCCChh
Confidence 13347999999886654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.88 E-value=3.9e-05 Score=85.93 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=49.2
Q ss_pred CCccccccceEEEEeEECCCCeEEEEEEeeccCC-------CchhHHHHHHHHHHhccC--C-cceeEEEEeecccccCc
Q 037275 684 SNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQK-------GASNGFVAECQALRNIRH--R-NLIKIITICSSIDFKGV 753 (992)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~ 753 (992)
.+.+|.|.++.||+++...+++.|+||....... ....++..|.++++.+.. | .+.+++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~ 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence 4679999999999997655678899998643211 234567889999988742 3 344555542 1
Q ss_pred ceEEEEEEeccCC
Q 037275 754 DFQAIVYEYMQNG 766 (992)
Q Consensus 754 ~~~~lv~e~~~~g 766 (992)
...++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 1237999999763
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.87 E-value=9.3e-06 Score=74.34 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=61.1
Q ss_pred ceeeccCCccc-ccCCccccccCCCCEEECCCcccCCCChhhhhcCCCcceEecCCCcCcccCCCCCccCCcccc--ccc
Q 037275 519 QQLYLQGNSFS-GSIPSSLSSLKSIKELDMSSNNLSGQIPEYLENLSFLEYLNLSYNHFEGEVPTKGVFSNKTGI--SLS 595 (992)
Q Consensus 519 ~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~--~l~ 595 (992)
..++.+++.|+ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|+|.|.+...+...++... ...
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~wl~~~~~~~~ 88 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAGRPERAP 88 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHHHHTSSCSGG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHHHHhCccccc
Confidence 36777777776 24554432 36899999999999777788999999999999999999988765444433221 112
Q ss_pred CCCCcCCCCCCC
Q 037275 596 GNGKVCGGLDEL 607 (992)
Q Consensus 596 ~N~~~C~~~~~~ 607 (992)
.....|..|..+
T Consensus 89 ~~~~~C~~P~~l 100 (130)
T 3rfe_A 89 YRDLRCVAPPAL 100 (130)
T ss_dssp GTTCBCCBSTTT
T ss_pred ccCcEeCcChHH
Confidence 235678776643
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.66 E-value=1.1e-05 Score=77.16 Aligned_cols=84 Identities=18% Similarity=0.109 Sum_probs=57.3
Q ss_pred CCccEEeeecccccccCCcccccccccceeeccCCc-ccccCCcccccc----CCCCEEECCCc-ccCCCChhhhhcCCC
Q 037275 492 KNLVYFNISVNRFSGEIPVTLSACTSLQQLYLQGNS-FSGSIPSSLSSL----KSIKELDMSSN-NLSGQIPEYLENLSF 565 (992)
Q Consensus 492 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N-~l~~~~p~~~~~l~~ 565 (992)
.+|+.||++++.++..--..+.++++|+.|+|+++. |++..-..++.+ ++|++|+|++| +|+..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467888888887776555556777888888888874 665433444443 36888888887 476544456677788
Q ss_pred cceEecCCCc
Q 037275 566 LEYLNLSYNH 575 (992)
Q Consensus 566 L~~L~l~~N~ 575 (992)
|++|+|++.+
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888887764
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.64 E-value=0.0002 Score=76.15 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=56.8
Q ss_pred CCCCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccC---CcceeEEEEeecccccCcceEE
Q 037275 681 FSSSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRH---RNLIKIITICSSIDFKGVDFQA 757 (992)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~~~~~~~~~ 757 (992)
...++.+|.|..+.||+++.. +|+.|++|+...........+..|+..|+.+.- --+.+++++.. .+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~---------~~ 86 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD---------RT 86 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET---------TE
T ss_pred eEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccC---------ce
Confidence 445678899999999999985 789999998764444445668899999998842 23455665421 17
Q ss_pred EEEEeccCCC
Q 037275 758 IVYEYMQNGS 767 (992)
Q Consensus 758 lv~e~~~~gs 767 (992)
+||||++++.
T Consensus 87 lv~e~l~~~~ 96 (288)
T 3f7w_A 87 LAMEWVDERP 96 (288)
T ss_dssp EEEECCCCCC
T ss_pred EEEEeecccC
Confidence 8999998764
No 428
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.63 E-value=0.00015 Score=79.42 Aligned_cols=148 Identities=16% Similarity=0.160 Sum_probs=80.7
Q ss_pred CccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCC--cceeEEEEeeccc-ccCcceEEEEEE
Q 037275 685 NMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHR--NLIKIITICSSID-FKGVDFQAIVYE 761 (992)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~-~~~~~~~~lv~e 761 (992)
+.|+.|..+.||++... +..+++|+... ....+..|+.+++.+... .+.+++....... ....+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 44666778999999874 44589998863 224455667777766421 2333332100000 012345689999
Q ss_pred eccCCCHH--------------HHHhhcccc---hhh-----cccCHHH-------------------------------
Q 037275 762 YMQNGSLE--------------DWLHQSEDQ---QEA-----RSLTLIQ------------------------------- 788 (992)
Q Consensus 762 ~~~~gsL~--------------~~l~~~~~~---~~~-----~~l~~~~------------------------------- 788 (992)
|++|.++. ..++..... ... ..-.|..
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 111111100 000 0011211
Q ss_pred HHHHHHHHHHHHHHHHh----------cCCCCeEeccCCCCCeeeCCCCcEEEeecccce
Q 037275 789 RINIIIDVASAIEYIHH----------HCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAK 838 (992)
Q Consensus 789 ~~~i~~qi~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (992)
...+..++..++++|++ ...+.++|||+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11122234456677763 123489999999999999888899999999775
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.56 E-value=1.7e-05 Score=75.91 Aligned_cols=34 Identities=3% Similarity=0.004 Sum_probs=15.2
Q ss_pred CCCEEEeecccCCCCCCcccccCCCCcEeecccc
Q 037275 99 RLEALVLANNSFSGKIPTNLSRCSNLISFNARRN 132 (992)
Q Consensus 99 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~l~~n 132 (992)
+|++|||+++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3445555554444322233444444444444444
No 430
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.35 E-value=0.00062 Score=72.56 Aligned_cols=142 Identities=16% Similarity=0.148 Sum_probs=89.5
Q ss_pred CCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhcc---CCcceeEEEEeecccccCcceEEEE
Q 037275 683 SSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIR---HRNLIKIITICSSIDFKGVDFQAIV 759 (992)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv 759 (992)
..+.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.+. ...+.++++++.. .+..++|
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-----~g~~~lv 109 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----QGHSFLL 109 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-----SSEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-----CCceEEE
Confidence 346789999999999986 4678889987532 3566889999999884 3567788877532 2456999
Q ss_pred EEeccCCCHH--------H---HHhhccc---ch-------------hhcccCHHHHH---HHHH---------------
Q 037275 760 YEYMQNGSLE--------D---WLHQSED---QQ-------------EARSLTLIQRI---NIII--------------- 794 (992)
Q Consensus 760 ~e~~~~gsL~--------~---~l~~~~~---~~-------------~~~~l~~~~~~---~i~~--------------- 794 (992)
|||+++..+. . .++.... .+ ....-+|.... ++..
T Consensus 110 me~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~ 189 (312)
T 3jr1_A 110 LEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNI 189 (312)
T ss_dssp EECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCH
T ss_pred EEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 9999987541 1 2222211 00 00112344321 1111
Q ss_pred -HHHHH-HHHHHh-cCCCCeEeccCCCCCeeeCCCCcEEEeecc
Q 037275 795 -DVASA-IEYIHH-HCQPPVVHGDLKPSNVLLDQDLVAHLGDFG 835 (992)
Q Consensus 795 -qi~~~-L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 835 (992)
+++.. ...|.. ..++.++|+|+.+.|++++.++ +.|.|++
T Consensus 190 ~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 190 DLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 123322 2256899999999999999887 8899974
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.26 E-value=1.6e-05 Score=77.66 Aligned_cols=122 Identities=14% Similarity=0.106 Sum_probs=76.0
Q ss_pred cCCCCCCCCcCCeeeccCC-CCCc----cCCccccCCCCCCEEEeecccCCC----CCCcccccCCCCcEeecccccccc
Q 037275 66 LSPYVGNLSFLRYLNLADN-NFHG----EIPHQIGRLVRLEALVLANNSFSG----KIPTNLSRCSNLISFNARRNNLVG 136 (992)
Q Consensus 66 l~~~l~~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~l~~n~l~~ 136 (992)
+...+.+-+.|+.|+|++| ++.. .+.+.+..-+.|++|+|++|+|.. .+-+.+..-+.|++|+|+.|.|..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3444556778899999885 7763 255667777889999999998873 233445566778888888887764
Q ss_pred cCChhhcccccccccccccccccCCCCCCccccccccceEEecCC---cccC----CcCCccCCCCcccEEeccCcccc
Q 037275 137 EIPAELGYNWLKLENLTIADNHLTGHFPASIGNLSTLERINVLGN---GLWG----RIPNNLGNLRNLILLNLGENRFS 208 (992)
Q Consensus 137 ~~p~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n---~l~~----~~~~~l~~l~~L~~L~L~~n~l~ 208 (992)
..-..+. +.+..-..|++|+|++| .+.. .+.+.+..-+.|+.|+++.|.+.
T Consensus 113 ~Ga~ala---------------------~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 113 ELLARLL---------------------RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHH---------------------HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHH---------------------HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 4333333 22333345666666543 2211 13344555577888888777654
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.23 E-value=0.00071 Score=76.13 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=47.2
Q ss_pred CCeEeccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCccc--ccccccccccccCC---CcCcccchhh
Q 037275 809 PPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIK--GTVGYIAPEYGMGG---EASMTGDVYS 883 (992)
Q Consensus 809 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~---~~~~~~DiwS 883 (992)
+.++|||++|.||+++.++ ++++||+.+..-... .+ ..... -...|.+|+..... ......++.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-----~D----la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-----FD----IGAYLGNLILAFFAQDGHATQENDRKEYKQWILR 301 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-----HH----HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-----HH----HHHHHHHHHHHHHhcccccccccchHHHHHHHHH
Confidence 4899999999999998876 999999988753210 00 00000 01346666654311 1122345567
Q ss_pred HHHHHHHHHhCC
Q 037275 884 FGILLLEMFTRR 895 (992)
Q Consensus 884 lG~il~elltg~ 895 (992)
.+..+|+.+++.
T Consensus 302 ~~~~~~~~y~~~ 313 (420)
T 2pyw_A 302 TIEQTWNLFNKR 313 (420)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788888877754
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.16 E-value=9.7e-05 Score=72.09 Aligned_cols=74 Identities=9% Similarity=0.096 Sum_probs=34.6
Q ss_pred chhhhccccCceeeeccccccccccc----cccccCccceEecCCCCCCCCCC-CCchhhhhccCCCcceEeecCCCcC
Q 037275 261 PESLSNASNLVELTLFDNQFRGKVSI----YFRSLKNLEWLNLGSNNLGTGEA-NDLDFLTLLTNCTELTAIGLDDNRF 334 (992)
Q Consensus 261 p~~l~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~l~~~~~L~~L~l~~n~l 334 (992)
...+...+.|++|+|+.|.|.+.... .+..-+.|++|+|++|....++. ...+....+...+.|+.|+++.|.+
T Consensus 91 A~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 91 IELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 34455556666666666666543332 23334456666666442211111 0111223444555556665555443
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.11 E-value=0.0016 Score=69.54 Aligned_cols=72 Identities=10% Similarity=0.119 Sum_probs=45.2
Q ss_pred CCCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcc-eeEEEEeecccccCcceEEEEEE
Q 037275 683 SSNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNL-IKIITICSSIDFKGVDFQAIVYE 761 (992)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e 761 (992)
-.+.|+.|....+|++ ..+++|+...... ......+|+.+++.+...++ .+++++..+ .-++|+|
T Consensus 22 ~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~-------~~~~v~e 87 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA------GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVDPA-------TGVMVTR 87 (301)
T ss_dssp SCEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT-------TCCEEEE
T ss_pred ceeEcCCcccccccee------eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEECC-------CCEEEEe
Confidence 3678999999999999 3588998753321 12234578888888753333 455554211 1268999
Q ss_pred ec-cCCCH
Q 037275 762 YM-QNGSL 768 (992)
Q Consensus 762 ~~-~~gsL 768 (992)
|+ ++.++
T Consensus 88 ~i~~g~~l 95 (301)
T 3dxq_A 88 YIAGAQTM 95 (301)
T ss_dssp CCTTCEEC
T ss_pred ecCCCccC
Confidence 99 65444
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.96 E-value=0.0031 Score=68.04 Aligned_cols=166 Identities=14% Similarity=0.116 Sum_probs=90.4
Q ss_pred cccHHHHHHHhcCCCCC-----CccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcc--ee
Q 037275 668 MISYAELSKATNDFSSS-----NMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNL--IK 740 (992)
Q Consensus 668 ~~~~~~~~~~~~~~~~~-----~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~ 740 (992)
.++.+++......|... +.|+.|....+|++... +| .+++|+.... .....+..|+.+++.+....+ .+
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCc
Confidence 45666777766667652 34667888999999874 33 6889988542 233456778888888853232 33
Q ss_pred EEEEeeccc--ccCcceEEEEEEeccCCCHHH--------------HHhhcccc-hhh-----cccCHHHHHH-------
Q 037275 741 IITICSSID--FKGVDFQAIVYEYMQNGSLED--------------WLHQSEDQ-QEA-----RSLTLIQRIN------- 791 (992)
Q Consensus 741 ~~~~~~~~~--~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~-~~~-----~~l~~~~~~~------- 791 (992)
++... +.. ....+..+++|+|++|..+.. .++..... ... ....|...+.
T Consensus 82 ~~~~~-~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 82 PLPRK-DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp BCCBT-TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred ccCCC-CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 33211 000 001234589999998764311 11111000 000 0001221100
Q ss_pred -----HHHHHHHHHHHHHhc----CCCCeEeccCCCCCeeeCCCCcEEEeecccce
Q 037275 792 -----IIIDVASAIEYIHHH----CQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAK 838 (992)
Q Consensus 792 -----i~~qi~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 838 (992)
+...+...++++++. .+.+++|+|+.+.||+++.++.+.++||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244556666542 13478999999999999887666899999775
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.83 E-value=0.0068 Score=65.49 Aligned_cols=167 Identities=14% Similarity=0.147 Sum_probs=91.9
Q ss_pred CCcccHHHHHHHhcCCCC-----CCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCc--c
Q 037275 666 FPMISYAELSKATNDFSS-----SNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRN--L 738 (992)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--i 738 (992)
+...+.+++......|.+ .+.++ |....||++... +|+.+++|+..... .....+..|..+++.+.... +
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCee
Confidence 455666666666555533 23466 778899998764 56679999986332 24556778999888885322 3
Q ss_pred eeEEEEeeccc--ccCcceEEEEEEeccCCCHH-----HH---------Hhhcccc---hhhcccCHHHH----HH----
Q 037275 739 IKIITICSSID--FKGVDFQAIVYEYMQNGSLE-----DW---------LHQSEDQ---QEARSLTLIQR----IN---- 791 (992)
Q Consensus 739 v~~~~~~~~~~--~~~~~~~~lv~e~~~~gsL~-----~~---------l~~~~~~---~~~~~l~~~~~----~~---- 791 (992)
.+++.. +.. ....+..++||||++|..+. .+ ++..... ......++... ..
T Consensus 85 p~~~~~--~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (328)
T 1zyl_A 85 AAPVAF--NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFED 162 (328)
T ss_dssp CCCCCB--TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHT
T ss_pred cceeec--CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhh
Confidence 344332 111 01134557899999875321 11 1111000 00011121110 00
Q ss_pred -----------HHHHHHHHHHHHHhc----CCCCeEeccCCCCCeeeCCCCcEEEeeccccee
Q 037275 792 -----------IIIDVASAIEYIHHH----CQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKF 839 (992)
Q Consensus 792 -----------i~~qi~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (992)
+...+...++.+.+. .+..++|||+++.||+++ + .+.++||+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 163 ATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 111112223333321 233688999999999998 4 899999988753
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.78 E-value=0.0067 Score=68.35 Aligned_cols=75 Identities=15% Similarity=0.097 Sum_probs=48.4
Q ss_pred CCccccccceEEEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcc-eeEEEEeecccccCcceEEEEEEe
Q 037275 684 SNMIGQGSFGFVYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNL-IKIITICSSIDFKGVDFQAIVYEY 762 (992)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 762 (992)
.+.|+.|-...+|++.....+..+++|+...... ..-...+|..+++.+...++ .++++++ .+ ..||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~-----~~----G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFF-----TN----GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEE-----TT----EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEe-----CC----eEEEEe
Confidence 3568888889999999864358899998743221 11223689999999864444 4666653 11 359999
Q ss_pred ccCCCH
Q 037275 763 MQNGSL 768 (992)
Q Consensus 763 ~~~gsL 768 (992)
++|.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987543
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.70 E-value=0.0045 Score=67.81 Aligned_cols=144 Identities=12% Similarity=0.147 Sum_probs=82.8
Q ss_pred CCccccccceEEEEeEECC-------CCeEEEEEEeeccCCCchhHHHHHHHHHHhcc-CCcceeEEEEeecccccCcce
Q 037275 684 SNMIGQGSFGFVYKGNLGE-------NGMMVAVKVINLKQKGASNGFVAECQALRNIR-HRNLIKIITICSSIDFKGVDF 755 (992)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 755 (992)
++.+..|....+|++.... +++.+++|+.... ........+|..+++.+. +.-..++++++. +
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~-----~--- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP-----E--- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET-----T---
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC-----C---
Confidence 3567778888999998742 3578999986432 223456678999998884 322356666532 1
Q ss_pred EEEEEEeccCCCHHH--------------HH---hhcccchhhccc--CHHHHHHHHHHHHH------------------
Q 037275 756 QAIVYEYMQNGSLED--------------WL---HQSEDQQEARSL--TLIQRINIIIDVAS------------------ 798 (992)
Q Consensus 756 ~~lv~e~~~~gsL~~--------------~l---~~~~~~~~~~~l--~~~~~~~i~~qi~~------------------ 798 (992)
.+||||++|.++.. .+ +..... ..... -+.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~-~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMP-FTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCS-SCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCC-CCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 38999998765431 11 111000 01111 23445555544322
Q ss_pred -HHHHHHh----c-CCCCeEeccCCCCCeeeCCC----CcEEEeecccce
Q 037275 799 -AIEYIHH----H-CQPPVVHGDLKPSNVLLDQD----LVAHLGDFGLAK 838 (992)
Q Consensus 799 -~L~~LH~----~-~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~ 838 (992)
.+..|.+ . ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2333322 1 12368999999999999876 789999999876
No 439
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.64 E-value=0.014 Score=63.04 Aligned_cols=144 Identities=12% Similarity=0.038 Sum_probs=74.4
Q ss_pred CccccccceE-EEEeEECCCCeEEEEEEeeccCCCchhHHHHHHHHHHhccCC--cceeEEEEeecccccCcceEEEEEE
Q 037275 685 NMIGQGSFGF-VYKGNLGENGMMVAVKVINLKQKGASNGFVAECQALRNIRHR--NLIKIITICSSIDFKGVDFQAIVYE 761 (992)
Q Consensus 685 ~~lg~G~~g~-V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e 761 (992)
+.|+.|.... +|+.... ++..+++|...... ...+..|+.+++.+... .+.+++.+.. .. + ++|||
T Consensus 24 ~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~----~~-g--~ll~e 92 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEH----AR-G--LLLIE 92 (333)
T ss_dssp CC--------CCEEEECT-TCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEET----TT-T--EEEEC
T ss_pred eECCCCCCCceEEEEEcC-CCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecC----CC-C--EEEEe
Confidence 4566665554 6677642 36677787654321 13455678887777432 3455666521 11 2 68999
Q ss_pred eccCCCHHHHHhhcccc--------------------hhhcccCHHHHH-------H-------------HHHHHHHHHH
Q 037275 762 YMQNGSLEDWLHQSEDQ--------------------QEARSLTLIQRI-------N-------------IIIDVASAIE 801 (992)
Q Consensus 762 ~~~~gsL~~~l~~~~~~--------------------~~~~~l~~~~~~-------~-------------i~~qi~~~L~ 801 (992)
++.+.++.+++...... .....++..... . ....+...++
T Consensus 93 ~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 172 (333)
T 3csv_A 93 DLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFA 172 (333)
T ss_dssp CCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHH
T ss_pred eCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 99777776655432110 000011111100 0 0011122223
Q ss_pred HHHh---cCCCCeEeccCCCCCeeeCCC----CcEEEeeccccee
Q 037275 802 YIHH---HCQPPVVHGDLKPSNVLLDQD----LVAHLGDFGLAKF 839 (992)
Q Consensus 802 ~LH~---~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~ 839 (992)
.+.+ ...+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 173 ~l~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 173 QILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHHHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3311 123479999999999999875 6899999998864
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.52 E-value=0.0026 Score=57.88 Aligned_cols=57 Identities=16% Similarity=0.363 Sum_probs=43.3
Q ss_pred cEEeeeccccc-ccCCcccccccccceeeccCCcccccCCccccccCCCCEEECCCcccC
Q 037275 495 VYFNISVNRFS-GEIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSSNNLS 553 (992)
Q Consensus 495 ~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 553 (992)
..++.+++.++ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777888776 23554443 36888999999998777778888999999999999775
No 441
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.38 E-value=0.012 Score=66.08 Aligned_cols=73 Identities=23% Similarity=0.268 Sum_probs=49.7
Q ss_pred CCccccccceEEEEeEECC-------CCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCcc-eeEEEEeecccccCcce
Q 037275 684 SNMIGQGSFGFVYKGNLGE-------NGMMVAVKVINLKQKGASNGFVAECQALRNIRHRNL-IKIITICSSIDFKGVDF 755 (992)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~ 755 (992)
.+.|+.|....||++.... +++.+++|+.... .....+.+|..+++.+...++ .++++.+. +
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~-----~--- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS-----G--- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET-----T---
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC-----C---
Confidence 3567888889999998752 2578999988421 222566689999998853333 56666532 1
Q ss_pred EEEEEEeccCCC
Q 037275 756 QAIVYEYMQNGS 767 (992)
Q Consensus 756 ~~lv~e~~~~gs 767 (992)
.+|+||++|.+
T Consensus 148 -g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 -GRLEEYIPSRP 158 (429)
T ss_dssp -EEEECCCCEEE
T ss_pred -CEEEEEeCCcc
Confidence 48999998643
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.38 E-value=0.0051 Score=67.75 Aligned_cols=73 Identities=10% Similarity=0.127 Sum_probs=44.2
Q ss_pred CccccccceEEEEeEECC--------CCeEEEEEEeeccCCCchhHHHHHHHHHHhccCCc-ceeEEEEeecccccCcce
Q 037275 685 NMIGQGSFGFVYKGNLGE--------NGMMVAVKVINLKQKGASNGFVAECQALRNIRHRN-LIKIITICSSIDFKGVDF 755 (992)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 755 (992)
+.++.|....+|++.... .+..+++|+...... .......|..+++.+...+ +.++++.. . +
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~-~-- 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF-----N-G-- 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE-----T-T--
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec-----C-C--
Confidence 467788888999998742 126889998753221 1123467888888885334 34666542 1 1
Q ss_pred EEEEEEeccCCC
Q 037275 756 QAIVYEYMQNGS 767 (992)
Q Consensus 756 ~~lv~e~~~~gs 767 (992)
++||||++|.+
T Consensus 110 -~~v~e~i~G~~ 120 (369)
T 3c5i_A 110 -GRIEEWLYGDP 120 (369)
T ss_dssp -EEEEECCCSEE
T ss_pred -cEEEEEecCCc
Confidence 68999998754
No 443
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.11 E-value=0.042 Score=53.71 Aligned_cols=103 Identities=17% Similarity=0.163 Sum_probs=67.2
Q ss_pred CCHHHHHhhcccchhhcccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccceecCCCCC
Q 037275 766 GSLEDWLHQSEDQQEARSLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPL 845 (992)
Q Consensus 766 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 845 (992)
-+|.+.++.... ++++.++|.++.|.+.+|.-+-.... . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~~-----PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQ-----PINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD------- 97 (229)
T ss_dssp EEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred ccHHHHHHHcCC-----CcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-------
Confidence 389999987654 69999999999999999877632111 1 1233456889999999988764 2111
Q ss_pred CCCcccCCCCCcccccccccccccccCCCcCcccchhhHHHHHHHHHhCCCC
Q 037275 846 DTAVETPSSSKGIKGTVGYIAPEYGMGGEASMTGDVYSFGILLLEMFTRRRP 897 (992)
Q Consensus 846 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p 897 (992)
.....+.|||... ...+.+.=|||+|+++|..+-=..|
T Consensus 98 -------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0123467888753 3556788899999999999883333
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.70 E-value=0.014 Score=63.20 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=27.7
Q ss_pred CCeEeccCCCCCeeeCCCCcEEEeeccccee
Q 037275 809 PPVVHGDLKPSNVLLDQDLVAHLGDFGLAKF 839 (992)
Q Consensus 809 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 839 (992)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4789999999999999888999999987764
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.58 E-value=0.051 Score=59.63 Aligned_cols=144 Identities=14% Similarity=0.153 Sum_probs=81.1
Q ss_pred CccccccceEEEEeEECC-------CCeEEEEEEeeccCCC------------------chhHHHHHHHHHHhcc-CCcc
Q 037275 685 NMIGQGSFGFVYKGNLGE-------NGMMVAVKVINLKQKG------------------ASNGFVAECQALRNIR-HRNL 738 (992)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~ni 738 (992)
+.|..|-...+|++.... .+..|.+++.-..... ..+.+..|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678888999988752 1468899987432211 0112335888888884 4445
Q ss_pred eeEEEEeecccccCcceEEEEEEeccCCCHHH--------------HH---hhcccchhhcccC--HHHHHHHHHHHH--
Q 037275 739 IKIITICSSIDFKGVDFQAIVYEYMQNGSLED--------------WL---HQSEDQQEARSLT--LIQRINIIIDVA-- 797 (992)
Q Consensus 739 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~--------------~l---~~~~~~~~~~~l~--~~~~~~i~~qi~-- 797 (992)
.++++++ .+ .+|+||+++-+|.. .+ +..... ...... +..+.++..++.
T Consensus 138 Pkl~~~~-----~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~-~~~~~~~l~~~i~~~~~~l~~~ 207 (401)
T 3f2s_A 138 PKLYGIF-----PQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMP-FNKEPKWLFGTMEKYLKEVLRI 207 (401)
T ss_dssp CCEEEEE-----TT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCS-SCCSCCHHHHHHHHHHHHHHHC
T ss_pred CeEEEEe-----CC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCC-CCCCcchHHHHHHHHHHHHHhc
Confidence 5666663 21 38999998654421 00 010000 011111 223333333221
Q ss_pred --------------------HHHH----HHHhc-CCCCeEeccCCCCCeeeCCC------CcEEEeecccce
Q 037275 798 --------------------SAIE----YIHHH-CQPPVVHGDLKPSNVLLDQD------LVAHLGDFGLAK 838 (992)
Q Consensus 798 --------------------~~L~----~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~Dfg~a~ 838 (992)
..+. +|... .+..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 208 KFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred cCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 23222 13367899999999999877 789999998775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.51 E-value=0.12 Score=57.15 Aligned_cols=74 Identities=12% Similarity=0.088 Sum_probs=48.3
Q ss_pred CccccccceEEEEeEECCC-------CeEEEEEEeeccCCCchhHHHHHHHHHHhcc-CCcceeEEEEeecccccCcceE
Q 037275 685 NMIGQGSFGFVYKGNLGEN-------GMMVAVKVINLKQKGASNGFVAECQALRNIR-HRNLIKIITICSSIDFKGVDFQ 756 (992)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 756 (992)
+.+..|-...+|++..... ++.+++|+..... ...-...+|..+++.+. +.-..++++.+ . +
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~-----~-~--- 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF-----P-E--- 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE-----T-T---
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc-----C-C---
Confidence 4677788889999987521 5789999874332 22223468888888885 32244555542 1 1
Q ss_pred EEEEEeccCCCH
Q 037275 757 AIVYEYMQNGSL 768 (992)
Q Consensus 757 ~lv~e~~~~gsL 768 (992)
+.||||++|.++
T Consensus 146 ~~I~efI~G~~l 157 (424)
T 3mes_A 146 GRIEEFIDGEPL 157 (424)
T ss_dssp EEEEECCCSEEC
T ss_pred CEEEEEeCCccC
Confidence 789999988653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.82 E-value=0.8 Score=50.53 Aligned_cols=29 Identities=28% Similarity=0.456 Sum_probs=24.8
Q ss_pred eEeccCCCCCeee------CCCCcEEEeeccccee
Q 037275 811 VVHGDLKPSNVLL------DQDLVAHLGDFGLAKF 839 (992)
Q Consensus 811 ivH~Dlkp~NIll------~~~~~~kl~Dfg~a~~ 839 (992)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999998763
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=79.99 E-value=1.5 Score=42.85 Aligned_cols=83 Identities=16% Similarity=0.275 Sum_probs=61.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCcccccc
Q 037275 783 SLTLIQRINIIIDVASAIEYIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGTV 862 (992)
Q Consensus 783 ~l~~~~~~~i~~qi~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~ 862 (992)
..+...+++++.+|+....+++.. +|--+.|+||+++.++.+++.-.|.-..+
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~~l---------------------- 129 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQNVV---------------------- 129 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETTTB----------------------
T ss_pred hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCccCC----------------------
Confidence 478899999999999988766655 78889999999999999999877764322
Q ss_pred cccccccccCCCcCcccchh-hHHHHHHHHHhCCCCCCCC
Q 037275 863 GYIAPEYGMGGEASMTGDVY-SFGILLLEMFTRRRPTDGM 901 (992)
Q Consensus 863 ~y~aPE~~~~~~~~~~~Diw-SlG~il~elltg~~pf~~~ 901 (992)
+|.- .+ ..|.| .+=|++..+++++..|+..
T Consensus 130 ---~P~~-----~~-ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 130 ---DPLP-----VS-EAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp ---SCCC-----CC-HHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred ---CCCC-----CC-HHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 2211 11 12333 5778899999999888653
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=74.16 E-value=5.6 Score=38.93 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=59.7
Q ss_pred ccCHHHHHHHHHHHHHHHH-HHHhcCCCCeEeccCCCCCeeeCCCCcEEEeecccceecCCCCCCCCcccCCCCCccccc
Q 037275 783 SLTLIQRINIIIDVASAIE-YIHHHCQPPVVHGDLKPSNVLLDQDLVAHLGDFGLAKFLSSSPLDTAVETPSSSKGIKGT 861 (992)
Q Consensus 783 ~l~~~~~~~i~~qi~~~L~-~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt 861 (992)
..+...+++++.+|+.... +++.+ +|--+.|+||+++.++.+++.-.|.-..
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hRGi~~~---------------------- 133 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHVGVKES---------------------- 133 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCCEETTT----------------------
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEcCCccc----------------------
Confidence 3788899999999888777 66544 7888999999999999999988776432
Q ss_pred ccccccccccCCCcCcccchh-hHHHHHHHHHhCCCCCCC
Q 037275 862 VGYIAPEYGMGGEASMTGDVY-SFGILLLEMFTRRRPTDG 900 (992)
Q Consensus 862 ~~y~aPE~~~~~~~~~~~Diw-SlG~il~elltg~~pf~~ 900 (992)
++|.-+ + ..|.| .+=|++..++.++..|+.
T Consensus 134 ---lpP~e~-----~-ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 134 ---LPPDEW-----D-DERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ---BSSCSC-----C-HHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred ---CCCCCC-----C-HHHHHHHHHHHHHHHHcCCCCHHH
Confidence 233211 1 12333 577888888888887754
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=69.96 E-value=0.47 Score=53.33 Aligned_cols=61 Identities=11% Similarity=0.038 Sum_probs=17.9
Q ss_pred CCCCccccccceEEEEeEECCCCeEEEE------EEeeccC--CCchhHHHHHHHHHHhccCCcceeEEEEe
Q 037275 682 SSSNMIGQGSFGFVYKGNLGENGMMVAV------KVINLKQ--KGASNGFVAECQALRNIRHRNLIKIITIC 745 (992)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 745 (992)
.+.+.+| ||.||+|.+.....+||| |..+... .+....+.+|..+++..+|||+++..++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 4556776 999999999755568888 6654222 22335678899999999999999988764
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=54.02 E-value=1.9 Score=29.91 Aligned_cols=10 Identities=30% Similarity=0.497 Sum_probs=4.1
Q ss_pred hhhheecccc
Q 037275 643 VLFLARRRRS 652 (992)
Q Consensus 643 ~~~~~~~~~~ 652 (992)
+++++|||+.
T Consensus 31 ~~~~~RRr~~ 40 (44)
T 2ks1_B 31 IGLFMRRRHI 40 (44)
T ss_dssp HHHHHHTTTC
T ss_pred HHHHhhhhHh
Confidence 3344444443
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=43.20 E-value=7.2 Score=26.97 Aligned_cols=9 Identities=22% Similarity=0.338 Sum_probs=3.6
Q ss_pred hhheecccc
Q 037275 644 LFLARRRRS 652 (992)
Q Consensus 644 ~~~~~~~~~ 652 (992)
++++|||+.
T Consensus 31 ~~~~RRRr~ 39 (44)
T 2l2t_A 31 AVYVRRKSI 39 (44)
T ss_dssp HHHHHTTCS
T ss_pred HHHhhhhhh
Confidence 344444433
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.02 E-value=61 Score=27.07 Aligned_cols=46 Identities=13% Similarity=0.106 Sum_probs=25.8
Q ss_pred ccccccCCCccCCCcccEEEccCCcCCCCCCccccCCCCCcEEeccC
Q 037275 358 QISGIIPTGIRNLVNLVELCMDDNKLTGTIPHAIGELKNLQLLYLDS 404 (992)
Q Consensus 358 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 404 (992)
.++.+....|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344455556666666666666544 3335555666666666665544
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=37.40 E-value=8.5 Score=25.74 Aligned_cols=15 Identities=40% Similarity=0.700 Sum_probs=6.5
Q ss_pred hHHHHHHHhhhheec
Q 037275 635 GVILSLCLVLFLARR 649 (992)
Q Consensus 635 ~~~l~l~~~~~~~~~ 649 (992)
+++++..+++|+++|
T Consensus 23 gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 23 GAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHeec
Confidence 333344444454444
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.08 E-value=61 Score=27.08 Aligned_cols=42 Identities=12% Similarity=0.122 Sum_probs=20.5
Q ss_pred cCCcccccccccceeeccCCcccccCCccccccCCCCEEECCC
Q 037275 507 EIPVTLSACTSLQQLYLQGNSFSGSIPSSLSSLKSIKELDMSS 549 (992)
Q Consensus 507 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 549 (992)
+-..+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34445555555555555543 2223444555555555555443
Done!