Your job contains 1 sequence.
>037278
FQDLNWEKGTSRQIGTSRVSNKFQSDPSFALDYLENIRSRRKSPKTCGGFCFRVKKILDP
QRPFRNLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRSVLDLFYIIY
IILRLRISSLLAGNLHKTVRESAIKYFMGFFTIDLVAILPLPQVVILIIPTTRGTTFLNA
TNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVFNLLLYMLAGHVPMFSDW
NEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMKTTNRKRTGVYLQAGD
FFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMADDLKFAASRFRQMNGEQLEH
ILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINRLPDSSPSLGATIYASRFAATT
LRATRRIGTRAFTGESSCHDNSEVSAEEQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037278
(449 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2163776 - symbol:CNGC1 "cyclic nucleotide gate... 572 7.2e-88 2
TAIR|locus:2125206 - symbol:CNGC13 "cyclic nucleotide-gat... 487 3.6e-71 2
TAIR|locus:2061401 - symbol:CNGC6 "cyclic nucleotide-gate... 471 3.8e-69 2
TAIR|locus:2118836 - symbol:CNGC9 "cyclic nucleotide gate... 472 2.9e-67 2
TAIR|locus:2039084 - symbol:CNGC3 "cyclic nucleotide gate... 427 5.3e-65 2
TAIR|locus:2013139 - symbol:CNGC8 "cyclic nucleotide gate... 448 1.6e-63 2
TAIR|locus:2174448 - symbol:CNGC5 "cyclic nucleotide gate... 431 1.3e-61 2
TAIR|locus:2200502 - symbol:CNGC7 "cyclic nucleotide gate... 438 7.8e-60 2
TAIR|locus:2062814 - symbol:CNGC15 "cyclic nucleotide-gat... 408 1.5e-57 2
TAIR|locus:2039099 - symbol:CNGC11 "cyclic nucleotide-gat... 411 2.0e-56 3
TAIR|locus:2118816 - symbol:CNGC17 "cyclic nucleotide-gat... 418 2.0e-56 2
TAIR|locus:2185510 - symbol:CNGC18 "AT5G14870" species:37... 410 8.4e-56 2
TAIR|locus:2097860 - symbol:CNGC16 "cyclic nucleotide-gat... 423 3.5e-55 2
TAIR|locus:2046703 - symbol:CNGC14 "cyclic nucleotide-gat... 426 1.2e-54 2
TAIR|locus:2039114 - symbol:CNGC12 "cyclic nucleotide-gat... 324 9.0e-48 3
TAIR|locus:2162605 - symbol:CNGC4 "AT5G54250" species:370... 287 4.1e-35 3
TAIR|locus:2090572 - symbol:CNBT1 "cyclic nucleotide-bind... 206 3.8e-29 2
TAIR|locus:2180867 - symbol:DND1 "AT5G15410" species:3702... 281 1.5e-26 2
TAIR|locus:2090562 - symbol:CNGC19 "cyclic nucleotide gat... 196 3.9e-25 3
>TAIR|locus:2163776 [details] [associations]
symbol:CNGC1 "cyclic nucleotide gated channel 1"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISS] [GO:0005516 "calmodulin binding"
evidence=ISS;TAS;IPI] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide
binding" evidence=ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005242 "inward rectifier potassium channel
activity" evidence=IGI] [GO:0005221 "intracellular cyclic
nucleotide activated cation channel activity" evidence=IGI]
[GO:0006813 "potassium ion transport" evidence=IGI] [GO:0006816
"calcium ion transport" evidence=IGI] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006813 GO:GO:0006816
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 GO:GO:0005221 EMBL:Y16327
EMBL:AB025622 EMBL:AF370139 EMBL:BT000991 IPI:IPI00542122
PIR:T51354 RefSeq:NP_200125.1 UniGene:At.21042 UniGene:At.49166
ProteinModelPortal:O65717 SMR:O65717 STRING:O65717 TCDB:1.A.1.5.5
PaxDb:O65717 PRIDE:O65717 EnsemblPlants:AT5G53130.1 GeneID:835393
KEGG:ath:AT5G53130 GeneFarm:2463 TAIR:At5g53130 eggNOG:NOG322726
InParanoid:O65717 OMA:LDIIVRF PhylomeDB:O65717
ProtClustDB:CLSN2686516 Genevestigator:O65717 GermOnline:AT5G53130
Uniprot:O65717
Length = 716
Score = 572 (206.4 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 123/201 (61%), Positives = 147/201 (73%)
Query: 224 NLLLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLT 283
+L L +L VPMF +EQ+L +CD L+ VLYT ESYI +EGDPV EM FI RG+LLT
Sbjct: 475 HLCLALLM-RVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLT 533
Query: 284 MKTTNRKRTGV----YLQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALM 339
+ TTN RTG YL AGDF GEELL WAL+ SSS NLPISTRTVR L EVE AL
Sbjct: 534 I-TTNGGRTGFLNSEYLGAGDFCGEELLTWALDPHSSS-NLPISTRTVRALMEVEAFALK 591
Query: 340 ADDLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINR 399
ADDLKF AS+FR+++ +QL H R+Y+ +W+TWAA FIQAAWRRYI++KL+ES++ E NR
Sbjct: 592 ADDLKFVASQFRRLHSKQLRHTFRYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENR 651
Query: 400 LPD--------SSPSLGATIY 412
L D SSPSLGATIY
Sbjct: 652 LQDALAKEACGSSPSLGATIY 672
Score = 325 (119.5 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 76/190 (40%), Positives = 97/190 (51%)
Query: 56 KILDPQRPFR---NLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRSV 112
KILDPQ PF N IF + +IA+S+DPLFFY+P+++D KKCL +DK + T +RS
Sbjct: 83 KILDPQGPFLQRWNKIFVLACIIAVSLDPLFFYVPIIDDAKKCLGIDKKMEITASVLRSF 142
Query: 113 LD-------LFXXXXXXXXXXXXXXXAGNLHKTVRESAIKYFMGFFTIDXXXXXXXXXXX 165
D +F G L + RE A +Y F ID
Sbjct: 143 TDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIAKRYLSSHFIIDILAVLPLPQMV 202
Query: 166 XXXXXT-TRGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVFN 224
RG++ LN N+ K+ V FQY+PR IRIYP + +V R S IL W A FN
Sbjct: 203 ILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGAAFN 262
Query: 225 LLLYMLAGHV 234
L LYMLA HV
Sbjct: 263 LFLYMLASHV 272
>TAIR|locus:2125206 [details] [associations]
symbol:CNGC13 "cyclic nucleotide-gated channel 13"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0030551
"cyclic nucleotide binding" evidence=ISS] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009693 "ethylene biosynthetic process"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0045087 "innate immune
response" evidence=RCA] [GO:0050832 "defense response to fungus"
evidence=RCA] InterPro:IPR005821 Pfam:PF00520 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042
GO:GO:0005216 GO:GO:0030552 EMBL:AL161491 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 EMBL:AL080237 IPI:IPI00532704
PIR:D85013 RefSeq:NP_192010.2 UniGene:At.54067
ProteinModelPortal:Q9LD40 SMR:Q9LD40 STRING:Q9LD40
EnsemblPlants:AT4G01010.1 GeneID:826427 KEGG:ath:AT4G01010
GeneFarm:2779 TAIR:At4g01010 eggNOG:NOG285377 InParanoid:Q9LD40
OMA:FIDAFYI PhylomeDB:Q9LD40 ProtClustDB:CLSN2687606
Genevestigator:Q9LD40 GermOnline:AT4G01010 Uniprot:Q9LD40
Length = 696
Score = 487 (176.5 bits), Expect = 3.6e-71, Sum P(2) = 3.6e-71
Identities = 105/193 (54%), Positives = 132/193 (68%)
Query: 234 VPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMKTTNRKRTG 293
VP+F +EQ+L +CD LK VLYT SY +EGDPV EM F+ RG+L++ TTN RTG
Sbjct: 472 VPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSA-TTNGGRTG 530
Query: 294 ----VYLQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMADDLKFAASR 349
VYL+ DF GE+LL WAL+ QSSS + PISTRTV+ LTEVE AL ADDLK AS+
Sbjct: 531 FFNAVYLKPSDFCGEDLLTWALDPQSSS-HFPISTRTVQALTEVEAFALAADDLKLVASQ 589
Query: 350 FRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINRLPD------- 402
FR+++ +QL+H RFY+ +WRTW ASFIQAAWRR+ RKL S+ E +R +
Sbjct: 590 FRRLHSKQLQHTFRFYSVQWRTWGASFIQAAWRRHCRRKLARSLTEEEDRFRNAITKRER 649
Query: 403 ---SSPSLGATIY 412
SS SL AT+Y
Sbjct: 650 NAASSSSLVATLY 662
Score = 252 (93.8 bits), Expect = 3.6e-71, Sum P(2) = 3.6e-71
Identities = 65/191 (34%), Positives = 88/191 (46%)
Query: 55 KKILDPQRPFR---NLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRS 111
K I++PQ F N IF VIA+++DPLFFYIP+V+ ++ CL L + L +R+
Sbjct: 66 KNIINPQGSFLQNWNKIFLFASVIALAIDPLFFYIPIVDGERHCLNLHRNLEIAASVLRT 125
Query: 112 VLD-------LFXXXXXXXXXXXXXXXAGNLHKTVRESAIKYFMGFFTIDXXXXXXXXXX 164
+D +F G L + AIKY +F ID
Sbjct: 126 FIDAFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSSYFIIDLLSILPLPQL 185
Query: 165 XXXXXXTTRGTTFLNATNLFKYFVIF-QYVPRIIRIYPFFTKVRRNSDILPGATWPKAVF 223
T + VIF QY+PRI+RIYP +T+V R S I+ W A +
Sbjct: 186 VVLAVIPNVNKPVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAWAGAAW 245
Query: 224 NLLLYMLAGHV 234
NL LYMLA HV
Sbjct: 246 NLSLYMLASHV 256
>TAIR|locus:2061401 [details] [associations]
symbol:CNGC6 "cyclic nucleotide-gated channel 6"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006813 "potassium ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=TAS;IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0006486
"protein glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0009294 "DNA mediated
transformation" evidence=RCA] InterPro:IPR000048 InterPro:IPR003938
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01463 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 GO:GO:0046686
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005249
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 eggNOG:NOG291133 EMBL:Y17914
EMBL:AC005170 IPI:IPI00516555 PIR:B84631 PIR:T52572
RefSeq:NP_565560.1 UniGene:At.402 PDB:1WGP PDBsum:1WGP
ProteinModelPortal:O82226 SMR:O82226 STRING:O82226 PaxDb:O82226
PRIDE:O82226 EnsemblPlants:AT2G23980.1 GeneID:816931
KEGG:ath:AT2G23980 GeneFarm:2470 TAIR:At2g23980 InParanoid:O82226
OMA:FLTIERE PhylomeDB:O82226 ProtClustDB:CLSN2685623
EvolutionaryTrace:O82226 Genevestigator:O82226 GermOnline:AT2G23980
Uniprot:O82226
Length = 747
Score = 471 (170.9 bits), Expect = 3.8e-69, Sum P(2) = 3.8e-69
Identities = 93/175 (53%), Positives = 128/175 (73%)
Query: 226 LLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMK 285
L L VP+F + +E++L +C+ LK L+T +SY+ +EGDPV+EM FI RG+L ++
Sbjct: 504 LCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESV- 562
Query: 286 TTNRKRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMAD 341
TT+ R+G Y L+ GDF G+ELL WAL+ +S S NLP STRTV+ LTEVE AL+AD
Sbjct: 563 TTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGS-NLPSSTRTVKALTEVEAFALIAD 621
Query: 342 DLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGE 396
+LKF AS+FR+++ Q++H RFY+ +WRTWAA F+QAAWRRYI+RK E +R E
Sbjct: 622 ELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFMQAAWRRYIKRKKLEQLRKE 676
Score = 258 (95.9 bits), Expect = 3.8e-69, Sum P(2) = 3.8e-69
Identities = 60/191 (31%), Positives = 89/191 (46%)
Query: 55 KKILDPQRPFR---NLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRS 111
KKI DPQ F N +F ++A+SVDPLF Y+P +ND KC+ +D+ L + IR+
Sbjct: 101 KKIFDPQDKFLLLCNKLFVASCILAVSVDPLFLYLPFINDKAKCVGIDRKLAIIVTTIRT 160
Query: 112 VLDLFXXXXXXXXXXXXXXXA-------GNLHKTVRESAIKYFMGFFTIDXXXXXXXXXX 164
V+D F G L + A +Y +F ID
Sbjct: 161 VIDSFYLFHMALRFRTAYVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDLLSVLPVPQI 220
Query: 165 XX-XXXXTTRGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVF 223
T+RG L +Y V+ QY+PR +R+YP ++++R + + W A +
Sbjct: 221 IVWRFLYTSRGANVLATKQALRYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAY 280
Query: 224 NLLLYMLAGHV 234
LLLYMLA H+
Sbjct: 281 YLLLYMLASHI 291
>TAIR|locus:2118836 [details] [associations]
symbol:CNGC9 "cyclic nucleotide gated channel 9"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=ISS;TAS;IPI] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006813 "potassium
ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0009294 "DNA mediated transformation" evidence=RCA]
InterPro:IPR000048 InterPro:IPR003938 InterPro:IPR005821
Pfam:PF00520 PRINTS:PR01463 PROSITE:PS50096 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0016021 GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016020 GO:GO:0005249 InterPro:IPR018490 SMART:SM00100
SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042
EMBL:AL161577 GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338
KO:K05391 eggNOG:NOG291133 ProtClustDB:CLSN2685623 IPI:IPI00542671
PIR:E85357 RefSeq:NP_194785.1 UniGene:At.54558
ProteinModelPortal:Q9M0A4 SMR:Q9M0A4 PaxDb:Q9M0A4 PRIDE:Q9M0A4
EnsemblPlants:AT4G30560.1 GeneID:829179 KEGG:ath:AT4G30560
GeneFarm:2768 TAIR:At4g30560 InParanoid:Q9M0A4 OMA:NEKCIGI
PhylomeDB:Q9M0A4 Genevestigator:Q9M0A4 GermOnline:AT4G30560
Uniprot:Q9M0A4
Length = 733
Score = 472 (171.2 bits), Expect = 2.9e-67, Sum P(2) = 2.9e-67
Identities = 96/189 (50%), Positives = 131/189 (69%)
Query: 226 LLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMK 285
L L VP+F + +E++L +C+ LK LYT SY+ +EGDPV+EM FI RG+L ++
Sbjct: 503 LCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESV- 561
Query: 286 TTNRKRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMAD 341
TT+ R+G + L+ GDF GEELL WAL+ +S S NLP STRT + LTEVE AL+AD
Sbjct: 562 TTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGS-NLPSSTRTAKALTEVEAFALIAD 620
Query: 342 DLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINRLP 401
+LKF AS+FR+++ Q++H RFY+ +WRTWAA FIQAAWRRY+++K E +R E
Sbjct: 621 ELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRYVKKKKLEQLRKEEEEGE 680
Query: 402 DSSPSLGAT 410
S S+ AT
Sbjct: 681 GSVTSIRAT 689
Score = 238 (88.8 bits), Expect = 2.9e-67, Sum P(2) = 2.9e-67
Identities = 56/191 (29%), Positives = 88/191 (46%)
Query: 55 KKILDPQRPFR---NLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRS 111
KKI DPQ F N +F ++A+SVDPLF Y+P V D++KC+ +D+ L +R+
Sbjct: 101 KKIFDPQDKFLLLCNKLFVTSCILAVSVDPLFLYLPFVKDNEKCIGIDRKLAIIATTLRT 160
Query: 112 VLDLFXXXXXXXXXXXXXXXA-------GNLHKTVRESAIKYFMGFFTIDXXXXXXXXXX 164
V+D F G L + A +Y +F ID
Sbjct: 161 VIDAFYLFHMALRFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQI 220
Query: 165 XX-XXXXTTRGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVF 223
++G + L + ++ QY+PR IR+YP ++++R + + W A +
Sbjct: 221 VVWRFLYISKGASVLATKRALRSIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAY 280
Query: 224 NLLLYMLAGHV 234
LLLYMLA H+
Sbjct: 281 YLLLYMLASHI 291
>TAIR|locus:2039084 [details] [associations]
symbol:CNGC3 "cyclic nucleotide gated channel 3"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=TAS] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC006526 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 GO:GO:0030552 GO:GO:0030553
UniGene:At.19641 UniGene:At.36508 HOGENOM:HOG000238338 KO:K05391
EMBL:Y17911 EMBL:AF107726 EMBL:AY058167 IPI:IPI00548977 PIR:G84902
RefSeq:NP_001118537.1 RefSeq:NP_566075.1 UniGene:At.67271
ProteinModelPortal:Q9SKD7 SMR:Q9SKD7 STRING:Q9SKD7 TCDB:1.A.1.5.8
EnsemblPlants:AT2G46430.1 EnsemblPlants:AT2G46430.2 GeneID:819251
KEGG:ath:AT2G46430 GeneFarm:2465 TAIR:At2g46430 eggNOG:NOG294759
InParanoid:Q9SKD7 OMA:REACAKI PhylomeDB:Q9SKD7
ProtClustDB:CLSN2917345 Genevestigator:Q9SKD7 GermOnline:AT2G46430
Uniprot:Q9SKD7
Length = 706
Score = 427 (155.4 bits), Expect = 5.3e-65, Sum P(2) = 5.3e-65
Identities = 96/200 (48%), Positives = 130/200 (65%)
Query: 226 LLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMK 285
L L VP F ++++L +C LK VLYT +SYI +EG+PV +M FI RG L++
Sbjct: 467 LCLKLLKKVPWFQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLIST- 525
Query: 286 TTNRKRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMAD 341
TT RTG + L AGDF G+ LL WAL+ SS PIS+RTV+ LTEVEG L AD
Sbjct: 526 TTYGGRTGFFNSVDLVAGDFCGD-LLTWALDPLSSQ--FPISSRTVQALTEVEGFLLSAD 582
Query: 342 DLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINRL- 400
DLKF A+++R+++ +QL H+ RFY+ +W+TWAA FIQAAW+R+ RKL +++R E +L
Sbjct: 583 DLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKRHCRRKLSKALREEEGKLH 642
Query: 401 -----PDSSPS---LGATIY 412
DS + LGA IY
Sbjct: 643 NTLQNDDSGGNKLNLGAAIY 662
Score = 264 (98.0 bits), Expect = 5.3e-65, Sum P(2) = 5.3e-65
Identities = 64/193 (33%), Positives = 91/193 (47%)
Query: 53 RVKKILDPQRPFR---NLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAI 109
++ ++++P + N IF +L V+A++ DPLFFYIP V ++ CL LDK L T
Sbjct: 68 KILRVMNPNDSYLQSWNKIFLLLSVVALAFDPLFFYIPYVKPERFCLNLDKKLQTIACVF 127
Query: 110 RSVLD-------LFXXXXXXXXXXXXXXXAGNLHKTVRESAIKYFMGFFTIDXXXXXXXX 162
R+ +D LF G L++ ++ A++Y +F ID
Sbjct: 128 RTFIDAFYVVHMLFQFHTGFITPSSSGFGRGELNEKHKDIALRYLGSYFLIDLLSILPIP 187
Query: 163 XXXXXXXXTT-RGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKA 221
R L A L K+ + QYVPRI RIYP F +V R S ++ W A
Sbjct: 188 QVVVLAIVPRMRRPASLVAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGA 247
Query: 222 VFNLLLYMLAGHV 234
NL LYMLA HV
Sbjct: 248 ALNLFLYMLASHV 260
>TAIR|locus:2013139 [details] [associations]
symbol:CNGC8 "cyclic nucleotide gated channel 8"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016020 "membrane" evidence=IEA] [GO:0030551
"cyclic nucleotide binding" evidence=ISS] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=IGI;RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000048 InterPro:IPR005821 Pfam:PF00520
PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 EMBL:AC007797 EMBL:AC024609
GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391
eggNOG:NOG291133 IPI:IPI00527954 PIR:H86330 RefSeq:NP_173408.2
UniGene:At.24554 UniGene:At.66905 ProteinModelPortal:Q9FXH6
SMR:Q9FXH6 EnsemblPlants:AT1G19780.1 GeneID:838566
KEGG:ath:AT1G19780 GeneFarm:2766 TAIR:At1g19780 InParanoid:Q9FXH6
OMA:HIVITQY PhylomeDB:Q9FXH6 ProtClustDB:CLSN2679754
Genevestigator:Q9FXH6 GermOnline:AT1G19780 Uniprot:Q9FXH6
Length = 753
Score = 448 (162.8 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 89/171 (52%), Positives = 124/171 (72%)
Query: 230 LAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMKTTNR 289
L VP+F++ +E++L +C+ LK LYT +YI +EGDPV+EM FI RG+L ++ TT+
Sbjct: 502 LVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESV-TTDG 560
Query: 290 KRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMADDLKF 345
R+G + L+ GDF GEELL WAL+ ++ S NLP STRTV+ LTEVE AL A++LKF
Sbjct: 561 GRSGFFNRGLLKEGDFCGEELLTWALDPKAGS-NLPSSTRTVKALTEVEAFALEAEELKF 619
Query: 346 AASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGE 396
AS+FR+++ Q++ RFY+ +WRTWAA FIQAAWRR++ RK+ E R E
Sbjct: 620 VASQFRRLHSRQVQQTFRFYSQQWRTWAACFIQAAWRRHLRRKIAELRRKE 670
Score = 230 (86.0 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 68/241 (28%), Positives = 103/241 (42%)
Query: 10 TSRQIG-TSRVSNKFQSDPSFALDYLENIRSRRKSPKTCGGFC--FRV--KKILDPQRP- 63
TSR G T S F+ + L+ I S T F RV KKI DPQ
Sbjct: 45 TSRGGGKTKNTSKSFREGVKIGSEGLKTIGKSFTSGVTRAVFPEDLRVSEKKIFDPQDKT 104
Query: 64 --FRNLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRSVLDLFXXXXX 121
N +F I ++A+SVDPLFFY+P+V++ K C+ +D L T +R+++D+F
Sbjct: 105 LLLWNRMFVISCILAVSVDPLFFYLPIVDNSKNCIGIDSKLAVTTTTLRTIIDVFYLTRM 164
Query: 122 XXXXXXXXXXA-------GNLHKTVRESAIKYFMGFFTIDXXXXXXXXXXXX-XXXXTTR 173
G L + A +Y +F +D ++
Sbjct: 165 ALQFRTAYIAPSSRVFGRGELVIDPAKIAERYLTRYFIVDFLAVLPLPQIAVWKFLHGSK 224
Query: 174 GTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVFNLLLYMLAGH 233
GT L + VI QY+PR +R P +++++ + W A + LL YMLA H
Sbjct: 225 GTDVLPTKQALLHIVITQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASH 284
Query: 234 V 234
+
Sbjct: 285 I 285
>TAIR|locus:2174448 [details] [associations]
symbol:CNGC5 "cyclic nucleotide gated channel 5"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005267 "potassium channel activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=TAS] InterPro:IPR000048
InterPro:IPR005821 Pfam:PF00520 PROSITE:PS50096 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016020 InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206
PROSITE:PS00888 PROSITE:PS00889 PROSITE:PS50042 GO:GO:0005216
EMBL:AB013396 GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338
KO:K05391 EMBL:Y17913 EMBL:AY091133 EMBL:AY114053 IPI:IPI00518325
IPI:IPI00529452 PIR:T52573 RefSeq:NP_200602.2 RefSeq:NP_851209.1
RefSeq:NP_974953.1 UniGene:At.22566 ProteinModelPortal:Q8RWS9
SMR:Q8RWS9 PaxDb:Q8RWS9 PRIDE:Q8RWS9 EnsemblPlants:AT5G57940.1
EnsemblPlants:AT5G57940.2 GeneID:835905 KEGG:ath:AT5G57940
GeneFarm:2467 TAIR:At5g57940 eggNOG:NOG251839 InParanoid:Q8RWS9
OMA:KCLGIDR PhylomeDB:Q8RWS9 ProtClustDB:CLSN2680554
ArrayExpress:Q8RWS9 Genevestigator:Q8RWS9 GermOnline:AT5G57940
Uniprot:Q8RWS9
Length = 717
Score = 431 (156.8 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 91/192 (47%), Positives = 127/192 (66%)
Query: 226 LLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMK 285
L L VP+F ++++L +C LK L+T +Y+ +EGDPV EM FI RG+L ++
Sbjct: 488 LCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESV- 546
Query: 286 TTNRKRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMAD 341
TT+ R+G + L+ G+F GEELL WAL+ +S NLP STRTV+ LTEVE AL ++
Sbjct: 547 TTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGV-NLPSSTRTVKALTEVEAFALTSE 605
Query: 342 DLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINRLP 401
+LKF AS+FR+++ Q++H RFY+ +WRTWAA FIQAAWRRY +RK E E +
Sbjct: 606 ELKFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKKMEEAEAEAAAVS 665
Query: 402 DSS--PS--LGA 409
S+ PS +GA
Sbjct: 666 SSTAGPSYSIGA 677
Score = 228 (85.3 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 54/191 (28%), Positives = 87/191 (45%)
Query: 55 KKILDPQRPFR---NLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRS 111
KKI DPQ F N +F ++++ VDP FFY+PV+N + KCL +D+ L T +R+
Sbjct: 86 KKIFDPQDKFLLYCNKLFVASCILSVFVDPFFFYLPVINAESKCLGIDRKLAITASTLRT 145
Query: 112 VLDLFXXXXXXXXXXXXXXXA-------GNLHKTVRESAIKYFMGFFTIDXXXXXXXXXX 164
+D+F G L + A +Y +F ID
Sbjct: 146 FIDVFYLAHMALQLRTAYIAPSSRVFGRGELVIDPAQIAKRYLQRWFIIDFLSVLPLPQI 205
Query: 165 XX-XXXXTTRGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVF 223
++ G+ L + V+ QY+PR +R+ P ++++R + + W A +
Sbjct: 206 VVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAY 265
Query: 224 NLLLYMLAGHV 234
LLLYMLA H+
Sbjct: 266 YLLLYMLASHI 276
Score = 42 (19.8 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 379 AAWRRYIERKLKESMRGEINRLPDSSPSLGATIY 412
A W R E LK R +++ D++P IY
Sbjct: 319 AVWNRAKESVLKSKCRADLD---DNNPPFDFGIY 349
>TAIR|locus:2200502 [details] [associations]
symbol:CNGC7 "cyclic nucleotide gated channel 7"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0005516 "calmodulin binding" evidence=ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0009860
"pollen tube growth" evidence=IGI] [GO:0090406 "pollen tube"
evidence=IDA] InterPro:IPR003938 InterPro:IPR005821 Pfam:PF00520
PRINTS:PR01463 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005249
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 EMBL:AC010924 GO:GO:0030552
GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391 IPI:IPI00525590
IPI:IPI01019556 PIR:E86294 RefSeq:NP_173051.1 UniGene:At.26234
UniGene:At.51627 ProteinModelPortal:Q9S9N5 SMR:Q9S9N5 GeneID:838169
KEGG:ath:AT1G15990 GeneFarm:2762 TAIR:At1g15990 eggNOG:NOG281568
InParanoid:Q9S9N5 PhylomeDB:Q9S9N5 ArrayExpress:Q9S9N5
Genevestigator:Q9S9N5 GermOnline:AT1G15990 Uniprot:Q9S9N5
Length = 738
Score = 438 (159.2 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 89/183 (48%), Positives = 126/183 (68%)
Query: 230 LAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMKTTNR 289
L VP+F++ +E++L +C+ LK L+T +YI +EGDPV+EM FI RG+L ++ TT+
Sbjct: 496 LVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESV-TTDG 554
Query: 290 KRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMADDLKF 345
R+G + L+ GDF GEELL WAL+ ++ S NLP STRTV+ LTEVE AL A++LKF
Sbjct: 555 GRSGFFNRGLLKEGDFCGEELLTWALDPKAGS-NLPSSTRTVKALTEVEAFALEAEELKF 613
Query: 346 AASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINRLPDSSP 405
AS+FR+++ Q++ RFY+ +WRTWA+ FIQAAWRRY RK E+ R+ +
Sbjct: 614 VASQFRRLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRK-----NAELRRIEEKEE 668
Query: 406 SLG 408
LG
Sbjct: 669 ELG 671
Score = 205 (77.2 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 53/192 (27%), Positives = 83/192 (43%)
Query: 55 KKILDPQRPFR---NLIFFILGVIAISVDPLFFYIPVV-NDDKKCLRLDKALGTTIIAIR 110
KKI DPQ N +F I ++A+SVDPLFFY+P+V N C+ +D L T +R
Sbjct: 88 KKIFDPQDKTLLVWNRLFVISCILAVSVDPLFFYLPIVDNSGSSCIGIDTKLAVTTTTLR 147
Query: 111 SVLDLFXXXXXXXXXXXXXXXA-------GNLHKTVRESAIKYFMGFFTIDXXXXXXXXX 163
+++D+F G L + A +Y +F +D
Sbjct: 148 TIVDVFYLTRMALQFRTAYIAPSSRVFGRGELVIDPAKIAERYLTRYFVVDFLAVLPLPQ 207
Query: 164 XXX-XXXXTTRGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAV 222
++G+ L VI QY+PR +R P +++++ + W A
Sbjct: 208 IAVWKFLHGSKGSDVLPTKTALLNIVIVQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAA 267
Query: 223 FNLLLYMLAGHV 234
+ LL YMLA H+
Sbjct: 268 YYLLWYMLASHI 279
>TAIR|locus:2062814 [details] [associations]
symbol:CNGC15 "cyclic nucleotide-gated channel 15"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006813 "potassium
ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030551 "cyclic nucleotide binding" evidence=ISS] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] InterPro:IPR000048 InterPro:IPR003938
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01463 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005249 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338
KO:K05391 EMBL:AC006202 IPI:IPI00539665 PIR:G84682
RefSeq:NP_180393.1 UniGene:At.52949 ProteinModelPortal:Q9SL29
SMR:Q9SL29 EnsemblPlants:AT2G28260.1 GeneID:817372
KEGG:ath:AT2G28260 GeneFarm:2783 TAIR:At2g28260 eggNOG:NOG284924
InParanoid:Q9SL29 OMA:GKDDHRA PhylomeDB:Q9SL29
ProtClustDB:CLSN2683550 Genevestigator:Q9SL29 GermOnline:AT2G28260
Uniprot:Q9SL29
Length = 678
Score = 408 (148.7 bits), Expect = 1.5e-57, Sum P(2) = 1.5e-57
Identities = 85/175 (48%), Positives = 117/175 (66%)
Query: 226 LLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMK 285
L + L VP+F +E++L +C+ LK L T +++ +EGDPV+EM FI RG L +
Sbjct: 461 LCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSY- 519
Query: 286 TTNRKRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMAD 341
TTN RTG + + GDF GEELL WAL+ + LP STRTV+ + EVE AL A+
Sbjct: 520 TTNGGRTGFFNSCLIGPGDFCGEELLTWALDPRPVVI-LPSSTRTVKAICEVEAFALKAE 578
Query: 342 DLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGE 396
DL+F AS+FR+++ +QL H RFY+ +WRTWAA FIQAAWRR+ +RK K +R +
Sbjct: 579 DLQFVASQFRRLHTKQLRHKFRFYSHQWRTWAACFIQAAWRRHRKRKYKTELRAK 633
Score = 212 (79.7 bits), Expect = 1.5e-57, Sum P(2) = 1.5e-57
Identities = 59/194 (30%), Positives = 91/194 (46%)
Query: 53 RVK-KILDPQ-RPFR--NLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIA 108
RVK KILDP+ + R N IF I ++++ VDPLFF++PV+ ++ C+ + L +
Sbjct: 63 RVKTKILDPRGQTIRRWNKIFLIACLVSLFVDPLFFFLPVMRNEA-CITIGVRLEVVLTL 121
Query: 109 IRSVLDLFXXXXXXXXXXXXXXXA-------GNLHKTVRESAIKYFMGFFTIDXXXXXXX 161
IRS+ D F G L R+ A +Y F I
Sbjct: 122 IRSLADAFYIAQILIRFRTAYIAPPSRVFGRGELVIDSRKIAWRYLHKSFWIHLVAALPL 181
Query: 162 XXXXXXXXXTT-RGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPK 220
RG+ N N+ ++ +IFQYVPR+ I+P ++ + + ++ W
Sbjct: 182 PQVLIWIIIPNLRGSPMTNTKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTETAWAG 241
Query: 221 AVFNLLLYMLAGHV 234
A +NL+LYMLA HV
Sbjct: 242 AAYNLMLYMLASHV 255
>TAIR|locus:2039099 [details] [associations]
symbol:CNGC11 "cyclic nucleotide-gated channels"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=ISS] [GO:0005261 "cation
channel activity" evidence=IGI] [GO:0009620 "response to fungus"
evidence=IMP] InterPro:IPR005821 Pfam:PF00520 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005261 GO:GO:0009620 EMBL:AC006526
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
EMBL:AK175287 IPI:IPI00526908 PIR:H84902 RefSeq:NP_182167.2
UniGene:At.19641 UniGene:At.36508 ProteinModelPortal:Q9SKD6
SMR:Q9SKD6 STRING:Q9SKD6 EnsemblPlants:AT2G46440.1 GeneID:819252
KEGG:ath:AT2G46440 GeneFarm:2772 TAIR:At2g46440 eggNOG:KOG0498
InParanoid:Q9SKD6 PhylomeDB:Q9SKD6 ProtClustDB:CLSN2681714
Genevestigator:Q9SKD6 GermOnline:AT2G46440 Uniprot:Q9SKD6
Length = 621
Score = 411 (149.7 bits), Expect = 2.0e-56, Sum P(3) = 2.0e-56
Identities = 93/200 (46%), Positives = 129/200 (64%)
Query: 226 LLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMK 285
L L VP+ ++Q+L +C LK V YT +SYI +EG+PV +M FI RG L++
Sbjct: 425 LFLKLLKKVPLLQAMDDQLLDALCARLKTVHYTEKSYIVREGEPVEDMLFIMRGNLIST- 483
Query: 286 TTNRKRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMAD 341
TT RTG + L AGD G+ LL WAL + SS PIS+RTV+ LTEVEG + AD
Sbjct: 484 TTYGGRTGFFNSVDLIAGDSCGD-LLTWALYSLSSQ--FPISSRTVQALTEVEGFVISAD 540
Query: 342 DLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINRL- 400
DLKF A+++R+++ +QL+H+ RFY+ +W+TWAA FIQAAW+R+ RKL +++R E +L
Sbjct: 541 DLKFVATQYRRLHSKQLQHMFRFYSLQWQTWAACFIQAAWKRHCRRKLSKALREEEGKLH 600
Query: 401 -----PDSSPS---LGATIY 412
DS + LGA IY
Sbjct: 601 NTLQNDDSGGNKLNLGAAIY 620
Score = 108 (43.1 bits), Expect = 2.0e-56, Sum P(3) = 2.0e-56
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 53 RVKKILDPQRPFRNLIFFIL--GVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIR 110
R+KK+ + N +L V+A+++DPLF +IP+++ + C DK L + IR
Sbjct: 26 RLKKVYGKMKTLENWRKTVLLACVVALAIDPLFLFIPLIDSQRFCFTFDKTLVAVVCVIR 85
Query: 111 SVLDLF 116
+ +D F
Sbjct: 86 TFIDTF 91
Score = 99 (39.9 bits), Expect = 2.0e-56, Sum P(3) = 2.0e-56
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 178 LNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVFNLLLYMLAGHV 234
L + + K+ ++ QYVPRIIR+YP + +V R + + A N LYML +V
Sbjct: 158 LVSERILKWIILSQYVPRIIRMYPLYKEVTRAFGTVAESKRVGAALNFFLYMLHSYV 214
>TAIR|locus:2118816 [details] [associations]
symbol:CNGC17 "cyclic nucleotide-gated channel 17"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030551 "cyclic nucleotide binding" evidence=ISS]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=ISS] InterPro:IPR003938
PRINTS:PR01463 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005249 EMBL:AL161576
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 UniGene:At.69303 GO:GO:0030552
GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391 eggNOG:NOG291133
EMBL:AY124000 EMBL:BT002284 IPI:IPI00530862 PIR:A85355
RefSeq:NP_194765.2 UniGene:At.31840 ProteinModelPortal:Q8L7Z0
SMR:Q8L7Z0 EnsemblPlants:AT4G30360.1 GeneID:829159
KEGG:ath:AT4G30360 GeneFarm:2785 TAIR:At4g30360 InParanoid:Q8L7Z0
OMA:TARVEEW PhylomeDB:Q8L7Z0 ProtClustDB:CLSN2918232
Genevestigator:Q8L7Z0 GermOnline:AT4G30360 Uniprot:Q8L7Z0
Length = 720
Score = 418 (152.2 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
Identities = 89/183 (48%), Positives = 121/183 (66%)
Query: 230 LAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMKTTNR 289
L VP FS ++Q+L +C+ L L T +Y+ +EGD +SEM FI RG+L + TTN
Sbjct: 475 LVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLFIIRGRLES-STTNG 533
Query: 290 KRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMADDLKF 345
RTG + L+ GDF GEELL WAL +S+ NLP STRTVR L EVE AL A+DLKF
Sbjct: 534 GRTGFFNSIILRPGDFCGEELLSWALLPKSTL-NLPSSTRTVRALVEVEAFALRAEDLKF 592
Query: 346 AASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINRLPDSSP 405
A++FR+++ ++L+H RFY+ WRTWAA FIQAAWRRY +R++ E+ I + +
Sbjct: 593 VANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRY-KRRVMENNLTAIESMENEEG 651
Query: 406 SLG 408
+G
Sbjct: 652 EVG 654
Score = 193 (73.0 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
Identities = 53/195 (27%), Positives = 81/195 (41%)
Query: 55 KKILDPQRPFR---NLIFFILGVIAISVDPLFFYIPVVNDDKK--CLRLDKALGTTIIAI 109
K ILDP N +F + ++A+ +DPL+F++P + DK C R D +L +
Sbjct: 69 KTILDPGSEIVLKWNWVFIVSCMVALFIDPLYFFVPAIGGDKNYPCARTDTSLSILVTFF 128
Query: 110 RSVLDLFX---------XXXXXXXXXXXXXXAGNLHKTVRESAIKYFMGFFTIDXXXXXX 160
R++ DLF G L + A +Y F ID
Sbjct: 129 RTIADLFYLLHIFIKFRTGFIAPNSSTRVFGRGELVMDPKAIAWRYIKSDFIIDLIATLP 188
Query: 161 XXXXXX-XXXXTTRGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWP 219
TT+ F + N V+ QY+PR I P +++ + + ++ W
Sbjct: 189 LPQIVIWFVISTTKSYRFDHNNNAIALIVLLQYIPRFYLIIPLSSQIVKATGVVTKTAWA 248
Query: 220 KAVFNLLLYMLAGHV 234
A +NLLLYMLA HV
Sbjct: 249 GAAYNLLLYMLASHV 263
>TAIR|locus:2185510 [details] [associations]
symbol:CNGC18 "AT5G14870" species:3702 "Arabidopsis
thaliana" [GO:0005216 "ion channel activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0030551 "cyclic
nucleotide binding" evidence=ISS] [GO:0005516 "calmodulin binding"
evidence=ISS] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IDA] [GO:0009860 "pollen tube growth" evidence=RCA;IMP]
[GO:0016324 "apical plasma membrane" evidence=IDA] [GO:0009827
"plant-type cell wall modification" evidence=RCA] [GO:0048610
"cellular process involved in reproduction" evidence=RCA]
[GO:0048868 "pollen tube development" evidence=RCA] PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016324 GO:GO:0009860 GO:GO:0006874
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0005216 GO:GO:0030552
GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391 eggNOG:NOG293740
EMBL:AL391149 IPI:IPI00534926 PIR:T51432 RefSeq:NP_196991.1
UniGene:At.31874 ProteinModelPortal:Q9LEQ3 SMR:Q9LEQ3 STRING:Q9LEQ3
PRIDE:Q9LEQ3 EnsemblPlants:AT5G14870.1 GeneID:831339
KEGG:ath:AT5G14870 GeneFarm:2787 TAIR:At5g14870 InParanoid:Q9LEQ3
OMA:AKTAWAG PhylomeDB:Q9LEQ3 ProtClustDB:CLSN2687259
Genevestigator:Q9LEQ3 GermOnline:AT5G14870 Uniprot:Q9LEQ3
Length = 706
Score = 410 (149.4 bits), Expect = 8.4e-56, Sum P(2) = 8.4e-56
Identities = 83/172 (48%), Positives = 115/172 (66%)
Query: 226 LLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMK 285
L L VP FS ++Q+L +C L L TA +YI +EGDPV+EM F+ RGQ+ +
Sbjct: 439 LCLSLVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIRGQIES-S 497
Query: 286 TTNRKRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMAD 341
TTN R+G + L+ GDF GEELL WAL +S+ NLP STR+VR L+EVE AL A+
Sbjct: 498 TTNGGRSGFFNSTTLRPGDFCGEELLTWAL-MPNSTLNLPSSTRSVRALSEVEAFALSAE 556
Query: 342 DLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESM 393
DLKF A +F+++ ++L+H R+Y+ +WR W A F+Q+AWRRY RKL + +
Sbjct: 557 DLKFVAHQFKRLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYKRRKLAKEL 608
Score = 195 (73.7 bits), Expect = 8.4e-56, Sum P(2) = 8.4e-56
Identities = 54/191 (28%), Positives = 82/191 (42%)
Query: 56 KILDPQR---PFRNLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRSV 112
+ILDP + N +F I ++A+ +DP +FY+P V CL +D +L T+ R+V
Sbjct: 39 QILDPDSNIVTYWNHVFLITSILALFLDPFYFYVPYVGGPA-CLSIDISLAATVTFFRTV 97
Query: 113 LDLFXXX-------XXXXXXXXXXXXAGNLHKTVRESAIKYFMGFFTIDXXXXXXXXXXX 165
D+F G L RE A++Y F ID
Sbjct: 98 ADIFHLLHIFMKFRTAFVARSSRVFGRGELVMDSREIAMRYLKTDFLIDVAAMLPLPQLV 157
Query: 166 XXXX--XTTRGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVF 223
T GT +A + V+ QY+PR I+P ++ + + + W A +
Sbjct: 158 IWLVIPAATNGTAN-HANSTLALIVLVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGAAY 216
Query: 224 NLLLYMLAGHV 234
NLLLY+LA HV
Sbjct: 217 NLLLYILASHV 227
Score = 37 (18.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 349 RFRQMNGEQLEHILRFYAPEW 369
R RQ+ E E + RF +W
Sbjct: 392 RHRQLPPELQERVRRFVQYKW 412
>TAIR|locus:2097860 [details] [associations]
symbol:CNGC16 "cyclic nucleotide-gated channel 16"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=ISS] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 EMBL:AL049658 GO:GO:0005216 GO:GO:0030552
GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391 EMBL:DQ446744
IPI:IPI00539888 PIR:T06682 RefSeq:NP_190384.1 UniGene:At.53828
ProteinModelPortal:Q9SU64 SMR:Q9SU64 EnsemblPlants:AT3G48010.1
GeneID:823956 KEGG:ath:AT3G48010 GeneFarm:2784 TAIR:At3g48010
eggNOG:NOG293740 InParanoid:Q9SU64 OMA:ICIMGLV PhylomeDB:Q9SU64
ProtClustDB:CLSN2684021 Genevestigator:Q9SU64 Uniprot:Q9SU64
Length = 705
Score = 423 (154.0 bits), Expect = 3.5e-55, Sum P(2) = 3.5e-55
Identities = 83/168 (49%), Positives = 118/168 (70%)
Query: 226 LLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMK 285
L L VP F+ ++Q+L +C+ L L T ++Y+ +EGDPV+EM FI RGQ+ +
Sbjct: 447 LCLALVRRVPFFAQMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQMES-S 505
Query: 286 TTNRKRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMAD 341
TT+ R+G + L+ GDF GEELL WAL + + NLP+STRTVRTL+EVE AL A+
Sbjct: 506 TTDGGRSGFFNSITLRPGDFCGEELLTWAL-VPNINHNLPLSTRTVRTLSEVEAFALRAE 564
Query: 342 DLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKL 389
DLKF A++FR+++ ++L+H R+Y+ +WR W FIQAAWRRY++RKL
Sbjct: 565 DLKFVANQFRRLHSKKLQHAFRYYSHQWRAWGTCFIQAAWRRYMKRKL 612
Score = 175 (66.7 bits), Expect = 3.5e-55, Sum P(2) = 3.5e-55
Identities = 53/197 (26%), Positives = 79/197 (40%)
Query: 56 KILDPQRPF--R-NLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRSV 112
K LDP R N IF I ++A+ +DPL+FY+P+V C+ +D G + R++
Sbjct: 43 KTLDPGGDLITRWNHIFLITCLLALFLDPLYFYLPIVQAGTACMSIDVRFGIFVTCFRNL 102
Query: 113 LDL-------FXXXXXXXXXXXXXXXAGNLHKTVRESAIKYFMGFFTIDXXXXXXXXXXX 165
DL G L RE AI+Y F ID
Sbjct: 103 ADLSFLIHILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQIM 162
Query: 166 XXXXXTTRGTTFLNA--TNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVF 223
G A + V+ QYVPR + + P ++ + + + W A +
Sbjct: 163 IWFVIPNAGEFRYAAHQNHTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAY 222
Query: 224 NLLLYMLAGHVPMFSDW 240
NL+LY+L HV + S W
Sbjct: 223 NLILYLLVSHV-LGSVW 238
Score = 41 (19.5 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 349 RFRQMNGEQLEHILRFYAPEWRT 371
R RQ+ E E + RF +W T
Sbjct: 400 RHRQLPDELQERVRRFVQYKWLT 422
>TAIR|locus:2046703 [details] [associations]
symbol:CNGC14 "cyclic nucleotide-gated channel 14"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005249 "voltage-gated potassium
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030551 "cyclic nucleotide binding" evidence=ISS]
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=ISS] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR003938 InterPro:IPR005821 Pfam:PF00520
PRINTS:PR01463 PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005249 EMBL:AC006954
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 EMBL:AK228122 IPI:IPI00518948
PIR:G84638 RefSeq:NP_850056.1 UniGene:At.39132
ProteinModelPortal:Q9SJA4 SMR:Q9SJA4 EnsemblPlants:AT2G24610.1
GeneID:816997 KEGG:ath:AT2G24610 GeneFarm:2782 TAIR:At2g24610
eggNOG:NOG291133 InParanoid:Q9SJA4 OMA:NTTVVFS PhylomeDB:Q9SJA4
ProtClustDB:CLSN2918083 Genevestigator:Q9SJA4 GermOnline:AT2G24610
Uniprot:Q9SJA4
Length = 726
Score = 426 (155.0 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 86/168 (51%), Positives = 116/168 (69%)
Query: 230 LAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMKTTNR 289
L VP+F+ ++Q+L +C+ L L T +YI +EGDPV+EM FI RG+L + TTN
Sbjct: 475 LVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLES-STTNG 533
Query: 290 KRTGVY----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMADDLKF 345
RTG + L+ GDF GEELL WAL S+ NLP STRTVR L EVE AL A DLKF
Sbjct: 534 GRTGFFNSITLRPGDFCGEELLAWAL-LPKSTVNLPSSTRTVRALEEVEAFALQAGDLKF 592
Query: 346 AASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESM 393
A++FR+++ ++L+H R+Y+ +WRTWAA F+Q AWRRY +KL +S+
Sbjct: 593 VANQFRRLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSL 640
Score = 168 (64.2 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 53/198 (26%), Positives = 82/198 (41%)
Query: 56 KILDP--QRPFR-NLIFFILGVIAISVDPLFFYIPVVN--DDKKCLRLDKALGTTIIAIR 110
KILDP + N +F ++A+ VDPLFF++ V C+ D LG I R
Sbjct: 71 KILDPGGDAVLQWNRVFLFWCLVALYVDPLFFFLSSVKRIGRSSCMTTDLKLGIVITFFR 130
Query: 111 SVLDLFXXX-------XXXXXXXXXXXXAGNLHKTVRESAIKYFMGFFTIDXXXXXXXXX 163
++ DLF G L K + A +Y F +D
Sbjct: 131 TLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLRSDFIVDLIACLPLPQ 190
Query: 164 XXXXXXXTT-RGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAV 222
+ R + + TN V+ QY+PR+ I+P ++ + + ++ W A
Sbjct: 191 IVSWFILPSIRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEIIKATGVVTTTAWAGAA 250
Query: 223 FNLLLYMLAGHVPMFSDW 240
+NLL YMLA H+ + S W
Sbjct: 251 YNLLQYMLASHI-LGSAW 267
>TAIR|locus:2039114 [details] [associations]
symbol:CNGC12 "cyclic nucleotide-gated channel 12"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide
binding" evidence=ISS] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0005261 "cation channel activity"
evidence=IGI;IMP] [GO:0009620 "response to fungus" evidence=IMP]
InterPro:IPR000048 InterPro:IPR005821 Pfam:PF00520 PROSITE:PS50096
Pfam:PF00027 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005261 GO:GO:0009620 EMBL:AC006526
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0030552 GO:GO:0030553
UniGene:At.36508 ProtClustDB:CLSN2681714 EMBL:AK118918
IPI:IPI00529355 IPI:IPI00547077 PIR:A84903 RefSeq:NP_850454.5
UniGene:At.50596 ProteinModelPortal:Q8GWD2 SMR:Q8GWD2 STRING:Q8GWD2
EnsemblPlants:AT2G46450.1 GeneID:819253 KEGG:ath:AT2G46450
GeneFarm:2776 TAIR:At2g46450 HOGENOM:HOG000238338 InParanoid:Q8GWD2
KO:K05391 OMA:DNENIPQ PhylomeDB:Q8GWD2 Genevestigator:Q8GWD2
GermOnline:AT2G46450 Uniprot:Q8GWD2
Length = 649
Score = 324 (119.1 bits), Expect = 9.0e-48, Sum P(3) = 9.0e-48
Identities = 78/194 (40%), Positives = 110/194 (56%)
Query: 227 LYM-LAGHVPMFSDWNEQ-ILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTM 284
LY+ + VP + ++ +L +CD +K V Y A S+I +EG PV EM +TRG+L +
Sbjct: 425 LYLDMLKRVPWLNIMDDGWLLEAVCDRVKSVFYLANSFIVREGHPVEEMLIVTRGKLKS- 483
Query: 285 KTTNRKRTGVY-----LQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALM 339
TT GV LQ GD GE L + LP STRTV TLTEVEG L+
Sbjct: 484 -TTGSHEMGVRNNCCDLQDGDICGELLF--------NGSRLPTSTRTVMTLTEVEGFILL 534
Query: 340 ADDLKFAASRFRQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINR 399
DD+KF AS ++L+ R Y+ +WR+WAA FIQAAWR++ +RKL ++ E
Sbjct: 535 PDDIKFIASHLNVFQRQKLQRTFRLYSQQWRSWAAFFIQAAWRKHCKRKLSKTRDNE--N 592
Query: 400 LPDSSP-SLGATIY 412
+P + +L +T+Y
Sbjct: 593 IPQGTQLNLASTLY 606
Score = 118 (46.6 bits), Expect = 9.0e-48, Sum P(3) = 9.0e-48
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 178 LNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVFNLLLYMLAGHV 234
L + + K+ ++ QYVPRIIR+YP + +V R + + W A NL LYML +V
Sbjct: 158 LVSERILKWIILSQYVPRIIRMYPLYKEVTRAFGTVAESKWAGAALNLFLYMLHSYV 214
Score = 108 (43.1 bits), Expect = 9.0e-48, Sum P(3) = 9.0e-48
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 53 RVKKILDPQRPFRNLIFFIL--GVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIR 110
R+KK+ + N +L V+A+++DPLF +IP+++ + C DK L + IR
Sbjct: 26 RLKKVYGKMKTLENWRKTVLLACVVALAIDPLFLFIPLIDSQRFCFTFDKTLVAVVCVIR 85
Query: 111 SVLDLF 116
+ +D F
Sbjct: 86 TFIDTF 91
>TAIR|locus:2162605 [details] [associations]
symbol:CNGC4 "AT5G54250" species:3702 "Arabidopsis
thaliana" [GO:0005261 "cation channel activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016020 "membrane"
evidence=IDA] [GO:0030551 "cyclic nucleotide binding" evidence=ISS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0008324 "cation
transmembrane transporter activity" evidence=IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] PROSITE:PS50096 Pfam:PF00027
INTERPRO:IPR000595 Gene3D:2.60.120.10 InterPro:IPR014710
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016020 GO:GO:0009626 EMBL:AB010695 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 EMBL:Y17912 EMBL:AY045822 EMBL:AY057691
EMBL:AY133734 IPI:IPI00534047 IPI:IPI00546492 PIR:T52574
RefSeq:NP_200236.1 RefSeq:NP_851188.1 UniGene:At.401
ProteinModelPortal:Q94AS9 SMR:Q94AS9 STRING:Q94AS9 TCDB:1.A.1.5.7
PaxDb:Q94AS9 PRIDE:Q94AS9 EnsemblPlants:AT5G54250.1
EnsemblPlants:AT5G54250.2 GeneID:835513 KEGG:ath:AT5G54250
GeneFarm:2466 TAIR:At5g54250 eggNOG:NOG326427 InParanoid:Q94AS9
OMA:YGAYQWT PhylomeDB:Q94AS9 ProtClustDB:CLSN2686736
Genevestigator:Q94AS9 GermOnline:AT5G54250 GO:GO:0008324
Uniprot:Q94AS9
Length = 694
Score = 287 (106.1 bits), Expect = 4.1e-35, Sum P(3) = 4.1e-35
Identities = 70/185 (37%), Positives = 99/185 (53%)
Query: 230 LAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMKTTNR 289
L VP+F ++ +L +CD +K +++T IQ+EGD V M F+ RG L +++
Sbjct: 490 LVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHL---QSSQL 546
Query: 290 KRTGV----YLQAGDFFGEELLMWALETQSSSENLPISTRTVRTLTEVEGLALMADDLKF 345
R GV L G+F G+ELL W L + E LP S+ T+ TL E L A+D+K+
Sbjct: 547 LRDGVKSCCMLGPGNFSGDELLSWCLR-RPFVERLPPSSSTLVTLETTEAFGLDAEDVKY 605
Query: 346 AASRFRQ-MNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLKESMRGEINRLPDSS 404
FR E+++ R+Y+P WRTWAA +Q AWRRY R S+ R P S
Sbjct: 606 VTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSR 665
Query: 405 -PSLG 408
SLG
Sbjct: 666 CASLG 670
Score = 102 (41.0 bits), Expect = 4.1e-35, Sum P(3) = 4.1e-35
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 56 KILDPQRPF-R--NLIFFILGVIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRSV 112
+ILDP+ + R N +F ++ + VDPLF Y V+D CL +D L T+ A+RS+
Sbjct: 78 RILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALRSM 137
Query: 113 LDL 115
DL
Sbjct: 138 TDL 140
Score = 71 (30.1 bits), Expect = 4.1e-35, Sum P(3) = 4.1e-35
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 173 RGTTFLNATNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDI---LPGATWPKAVFNLLLYM 229
RG+ L + L F +FQY+P+I Y +RRN+ + + G W N++ Y
Sbjct: 214 RGSVTLVVSVLLVTF-LFQYLPKI---YHSIRHLRRNATLSGYIFGTVWWGIALNMIAYF 269
Query: 230 LAGH 233
+A H
Sbjct: 270 VAAH 273
>TAIR|locus:2090572 [details] [associations]
symbol:CNBT1 "cyclic nucleotide-binding transporter 1"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0006811 "ion transport" evidence=IEA] [GO:0030551
"cyclic nucleotide binding" evidence=ISS] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0009624 "response to nematode"
evidence=IEP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0009595
"detection of biotic stimulus" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043900
"regulation of multi-organism process" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009624 EMBL:AB022219
InterPro:IPR018490 SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888
PROSITE:PS00889 PROSITE:PS50042 GO:GO:0009535 GO:GO:0005216
GO:GO:0030552 GO:GO:0030553 HOGENOM:HOG000238338 KO:K05391
EMBL:AF148542 ProtClustDB:CLSN2688496 EMBL:AF148541 IPI:IPI00542766
RefSeq:NP_566585.1 UniGene:At.6293 ProteinModelPortal:Q9LD37
SMR:Q9LD37 STRING:Q9LD37 EnsemblPlants:AT3G17700.1 GeneID:821037
KEGG:ath:AT3G17700 GeneFarm:2471 TAIR:At3g17700 eggNOG:NOG245622
InParanoid:Q9LD37 OMA:QCLRNAC PhylomeDB:Q9LD37
Genevestigator:Q9LD37 GermOnline:AT3G17700 Uniprot:Q9LD37
Length = 764
Score = 206 (77.6 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 60/173 (34%), Positives = 88/173 (50%)
Query: 227 LYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMKT 286
L+ V +FS +E IL + + LKQ Y S + G V +M FI RG+ M++
Sbjct: 584 LFKFLKKVRIFSLMDEPILDAIRERLKQRTYIGSSTVLHRGGLVEKMVFIVRGE---MES 640
Query: 287 TNRKRTGVYLQAGDFFGEELLMWALETQSSSEN-----LP----ISTRTVRTLTEVEGLA 337
+ + L GD GEELL W LE S + + +P +S+R VR +T VE +
Sbjct: 641 IGEDGSVLPLYEGDVCGEELLTWCLERSSVNPDGTRIRMPSKGLLSSRNVRCVTNVEAFS 700
Query: 338 LMADDLKFAASRF-RQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKL 389
L DL+ S F R + +++ +R+ +P WR AA IQ AWR Y R+L
Sbjct: 701 LSVADLEDVTSLFSRFLRSHRVQGAIRYDSPYWRLRAARQIQVAWR-YRRRRL 752
Score = 194 (73.4 bits), Expect = 3.8e-29, Sum P(2) = 3.8e-29
Identities = 71/240 (29%), Positives = 104/240 (43%)
Query: 13 QIGTSRVSNKFQSDPSFALDYLENIRSRRKSPKTCGGFCFRVKKILDPQ-RPFRNLI-FF 70
QI TSRVS F S AL Y + R+ + + + I++P + + FF
Sbjct: 152 QIPTSRVSALFDSTFHNAL-YDDAKGWARRFASSVNRY---LPGIMNPHAKEVQTWTKFF 207
Query: 71 ILG-VIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRSVLD-------LFXXXXXX 122
L ++AI +DPLFF++ V + KC+ +D + +A+RSV D L
Sbjct: 208 ALSCLLAIFIDPLFFFLIKVQEQNKCIMIDWPMTKAFVAVRSVTDVIFTMNILLQFRLAY 267
Query: 123 XXXXXXXXXAGNLHKTVRESAIKYFMGFFTIDXXXXXXXXXXXXXXXXTTR-GTTFLN-A 180
AG L ++ A+ Y G F +D G + N A
Sbjct: 268 VARESTVVGAGQLVSHPKKIALHYLKGKFFLDLFIVMPLPQILILWIIPAHLGASGANYA 327
Query: 181 TNLFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVFNLLLYMLAGHVPMFSDW 240
NL + V+FQY+P++ R+ PF I A W V NLL +MLAGHV + S W
Sbjct: 328 KNLLRAAVLFQYIPKLYRLLPFLAGQTPTGFIFESA-WANFVINLLTFMLAGHV-VGSCW 385
>TAIR|locus:2180867 [details] [associations]
symbol:DND1 "AT5G15410" species:3702 "Arabidopsis
thaliana" [GO:0005261 "cation channel activity" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0030551 "cyclic
nucleotide binding" evidence=ISS] [GO:0005242 "inward rectifier
potassium channel activity" evidence=IGI] [GO:0005221
"intracellular cyclic nucleotide activated cation channel activity"
evidence=IMP] [GO:0006952 "defense response" evidence=TAS]
[GO:0009626 "plant-type hypersensitive response" evidence=IMP]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0005222
"intracellular cAMP activated cation channel activity"
evidence=IDA] [GO:0005262 "calcium channel activity" evidence=IMP]
[GO:0007263 "nitric oxide mediated signal transduction"
evidence=IMP] PROSITE:PS50096 Pfam:PF00027 INTERPRO:IPR000595
Gene3D:2.60.120.10 InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0005516
GO:GO:0009626 GO:GO:0007263 GO:GO:0005242 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 EMBL:AL391143 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 GO:GO:0005222 EMBL:Y16328
EMBL:AF067798 EMBL:AF280939 IPI:IPI00517917 PIR:T51519
RefSeq:NP_197045.1 UniGene:At.20813 UniGene:At.74751
ProteinModelPortal:O65718 SMR:O65718 STRING:O65718 TCDB:1.A.1.5.6
EnsemblPlants:AT5G15410.1 GeneID:831393 KEGG:ath:AT5G15410
GeneFarm:2464 TAIR:At5g15410 eggNOG:NOG261665 InParanoid:O65718
OMA:SKRVQRW PhylomeDB:O65718 ProtClustDB:CLSN2687460
Genevestigator:O65718 Uniprot:O65718
Length = 726
Score = 281 (104.0 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 63/196 (32%), Positives = 108/196 (55%)
Query: 211 DILPGATWPKAVFNLLLYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPV 270
D+ PG + + L + L VP+F ++ IL +CD K +++ + I +EGDPV
Sbjct: 508 DLPPGLR--RDIKRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPV 565
Query: 271 SEMFFITRGQLLTMKTTNRKRTGVY-LQAGDFFGEELLMWALETQSSSENLPISTRTVRT 329
M FI RG++ +++ ++ L+ G + G+ELL W L + + LP S+ T
Sbjct: 566 QRMIFIMRGRVKRIQSLSKGVLATSTLEPGGYLGDELLSWCLR-RPFLDRLPPSSATFVC 624
Query: 330 LTEVEGLALMADDLKFAASRFR-QMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERK 388
L +E +L ++DL++ FR + E+L+ R+Y+ WRTWAA IQ AWRR +R
Sbjct: 625 LENIEAFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRT 684
Query: 389 LKESMRGEINRLPDSS 404
E++ G ++ + ++S
Sbjct: 685 RGENIGGSMSPVSENS 700
Score = 76 (31.8 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 56 KILDPQ--RPFR-NLIFFILGVIAISVDPLFFYIPVVN--DDKKCLRLDKALGTTIIAIR 110
++LDP+ R R N + +A++VDPLFFY + CL +D A + +R
Sbjct: 112 EVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVLR 171
Query: 111 SVLD 114
+ LD
Sbjct: 172 TCLD 175
>TAIR|locus:2090562 [details] [associations]
symbol:CNGC19 "cyclic nucleotide gated channel 19"
species:3702 "Arabidopsis thaliana" [GO:0005216 "ion channel
activity" evidence=IEA;ISS] [GO:0006811 "ion transport"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016020
"membrane" evidence=IEA] [GO:0030551 "cyclic nucleotide binding"
evidence=ISS] [GO:0055085 "transmembrane transport" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=ISS] InterPro:IPR005821
Pfam:PF00520 PROSITE:PS50096 INTERPRO:IPR000595 Gene3D:2.60.120.10
InterPro:IPR014710 GO:GO:0016021 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AB022219 InterPro:IPR018490
SMART:SM00100 SUPFAM:SSF51206 PROSITE:PS00888 PROSITE:PS00889
PROSITE:PS50042 GO:GO:0005216 GO:GO:0030552 GO:GO:0030553
HOGENOM:HOG000238338 KO:K05391 EMBL:AF148542 IPI:IPI00534688
RefSeq:NP_188396.2 UniGene:At.47913 ProteinModelPortal:Q9LDR2
SMR:Q9LDR2 STRING:Q9LDR2 PaxDb:Q9LDR2 PRIDE:Q9LDR2
EnsemblPlants:AT3G17690.1 GeneID:821036 KEGG:ath:AT3G17690
GeneFarm:2788 TAIR:At3g17690 eggNOG:NOG243723 InParanoid:Q9LDR2
OMA:DRRRMEM PhylomeDB:Q9LDR2 ProtClustDB:CLSN2688496
Genevestigator:Q9LDR2 GermOnline:AT3G17690 Uniprot:Q9LDR2
Length = 729
Score = 196 (74.1 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 56/172 (32%), Positives = 86/172 (50%)
Query: 227 LYMLAGHVPMFSDWNEQILSEMCDSLKQVLYTAESYIQQEGDPVSEMFFITRGQLLTMKT 286
L+ V +FS +E +L + + LKQ Y S + V +M FI RG+ M++
Sbjct: 551 LFKFLKKVRIFSLMDESVLDSIRERLKQRTYIRSSTVLHHRGLVEKMVFIVRGE---MES 607
Query: 287 TNRKRTGVYLQAGDFFGEELLMWALET---QSSSENLP----ISTRTVRTLTEVEGLALM 339
+ + L GD GEELL W L + + +P +S R VR +T VE +L
Sbjct: 608 IGEDGSVLPLSEGDVCGEELLTWCLSSINPDGTRIKMPPKGLVSNRNVRCVTNVEAFSLS 667
Query: 340 ADDLKFAASRF-RQMNGEQLEHILRFYAPEWRTWAASFIQAAWRRYIERKLK 390
DL+ S F R + +++ +R+ +P WR AA IQ AWR Y +R+L+
Sbjct: 668 VADLEDVTSLFSRFLRSHRVQGAIRYESPYWRLRAAMQIQVAWR-YRKRQLQ 718
Score = 165 (63.1 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 52/196 (26%), Positives = 82/196 (41%)
Query: 57 ILDPQRPFRNLIFFILG---VIAISVDPLFFYIPVVNDDKKCLRLDKALGTTIIAIRSVL 113
I++P F + +L ++AI +DPLFF++ ++ D KC+ +D ++++RS+
Sbjct: 158 IMNPHSKFVQVWTRVLAFSSLVAIFIDPLFFFLLLIQQDNKCIAIDWRATKVLVSLRSIT 217
Query: 114 DLFXXXXXXXXXXXXXXX-------AGNLHKTVRESAIKYFMGFFTIDXXXXXXXXXXXX 166
DL AG L R+ A YF G F +D
Sbjct: 218 DLIFFINILLQFRLAYVAPESRIVGAGQLVDHPRKIARHYFRGKFLLDMFIVFPIPQIMI 277
Query: 167 XXXXTTR-GTTFLNATN-LFKYFVIFQYVPRIIRIYPFFTKVRRNSDILPGATWPKAVFN 224
GT + + + V+FQY+P++ R+ P I A W V N
Sbjct: 278 LRIIPLHLGTRREESEKQILRATVLFQYIPKLYRLLPLLAGQTSTGFIFESA-WANFVIN 336
Query: 225 LLLYMLAGHVPMFSDW 240
LL +MLAGH + S W
Sbjct: 337 LLTFMLAGHA-VGSCW 351
Score = 41 (19.5 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 16 TSRVSNKFQSDPSFALDYLEN 36
TSR + S+PSF++D +N
Sbjct: 8 TSRNRSVSLSNPSFSIDGFDN 28
Score = 41 (19.5 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 47 CGGFCFRVKKILDPQRPFRNLIFFI 71
C +R K+L R +LIFFI
Sbjct: 199 CIAIDWRATKVLVSLRSITDLIFFI 223
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 449 399 0.00097 117 3 11 22 0.47 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 620 (66 KB)
Total size of DFA: 253 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.21u 0.10s 30.31t Elapsed: 00:00:02
Total cpu time: 30.21u 0.10s 30.31t Elapsed: 00:00:02
Start: Sat May 11 07:02:42 2013 End: Sat May 11 07:02:44 2013