Your job contains 1 sequence.
>037282
MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037282
(56 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097119 - symbol:AT3G43980 species:3702 "Arabi... 292 8.4e-26 1
TAIR|locus:2097154 - symbol:AT3G44010 species:3702 "Arabi... 292 8.4e-26 1
TAIR|locus:505006550 - symbol:AT4G33865 species:3702 "Ara... 292 8.4e-26 1
ZFIN|ZDB-GENE-040622-5 - symbol:rps29 "ribosomal protein ... 208 6.7e-17 1
UNIPROTKB|E1C3G8 - symbol:RPS29 "Uncharacterized protein"... 203 2.3e-16 1
UNIPROTKB|P62276 - symbol:RPS29 "40S ribosomal protein S2... 203 2.3e-16 1
UNIPROTKB|P62273 - symbol:RPS29 "40S ribosomal protein S2... 203 2.3e-16 1
UNIPROTKB|F2Z5R7 - symbol:RPS29 "40S ribosomal protein S2... 203 2.3e-16 1
MGI|MGI:107681 - symbol:Rps29 "ribosomal protein S29" spe... 203 2.3e-16 1
RGD|3596 - symbol:Rps29 "ribosomal protein S29" species:1... 203 2.3e-16 1
UNIPROTKB|E1BNY4 - symbol:LOC100848316 "Uncharacterized p... 202 2.9e-16 1
SGD|S000004380 - symbol:RPS29A "Protein component of the ... 202 2.9e-16 1
WB|WBGene00004498 - symbol:rps-29 species:6239 "Caenorhab... 201 3.7e-16 1
FB|FBgn0261599 - symbol:RpS29 "Ribosomal protein S29" spe... 195 1.6e-15 1
SGD|S000002219 - symbol:RPS29B "Protein component of the ... 194 2.0e-15 1
DICTYBASE|DDB_G0272308 - symbol:rps29 "40S ribosomal prot... 193 2.6e-15 1
UNIPROTKB|Q6QAP6 - symbol:RPS29 "40S ribosomal protein S2... 191 4.2e-15 1
ASPGD|ASPL0000011385 - symbol:AN11411 species:162425 "Eme... 187 1.1e-14 1
UNIPROTKB|I3LJY0 - symbol:LOC100621081 "Uncharacterized p... 179 7.9e-14 1
POMBASE|SPBC1685.09 - symbol:rps29 "40S ribosomal protein... 172 4.4e-13 1
RGD|1585590 - symbol:LOC684806 "similar to 40S ribosomal ... 158 1.3e-11 1
UNIPROTKB|I3LS69 - symbol:LOC100736624 "Uncharacterized p... 151 7.4e-11 1
UNIPROTKB|F1SJZ7 - symbol:LOC100738227 "Uncharacterized p... 139 1.4e-09 1
>TAIR|locus:2097119 [details] [associations]
symbol:AT3G43980 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
InterPro:IPR001209 Pfam:PF00253 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0006412 GO:GO:0003735 EMBL:AL031032
EMBL:AL163975 GO:GO:0022627 eggNOG:COG0199 HOGENOM:HOG000231300
KO:K02980 OMA:WFSHPRN EMBL:AK118617 EMBL:AF324695 EMBL:AF326888
EMBL:AF349528 EMBL:AF361851 EMBL:AY129480 EMBL:BT002766
EMBL:BT004344 EMBL:AF325031 EMBL:AK175132 EMBL:AK175152
EMBL:AK175172 EMBL:AK175173 EMBL:AK175283 EMBL:AK175731
EMBL:AK175739 EMBL:AK175819 EMBL:AK175918 EMBL:AK176060
EMBL:AK176070 EMBL:AK176294 EMBL:AK176295 EMBL:AK176322
EMBL:AK176332 EMBL:AK176439 EMBL:AK176861 EMBL:AK228020
EMBL:BT028875 EMBL:AY088245 EMBL:AY086767 EMBL:AY086371
IPI:IPI00534637 PIR:T48952 RefSeq:NP_189984.1 RefSeq:NP_189987.1
RefSeq:NP_567938.1 UniGene:At.20223 UniGene:At.20445
UniGene:At.43007 ProteinModelPortal:Q680P8 SMR:Q680P8 IntAct:Q680P8
STRING:Q680P8 PaxDb:Q680P8 PRIDE:Q680P8 EnsemblPlants:AT3G43980.1
EnsemblPlants:AT3G44010.1 EnsemblPlants:AT4G33865.1 GeneID:823515
GeneID:823518 GeneID:829529 KEGG:ath:AT3G43980 KEGG:ath:AT3G44010
KEGG:ath:AT4G33865 TAIR:At3g43980 TAIR:At3g44010 TAIR:At4g33865
InParanoid:Q680P8 PhylomeDB:Q680P8 ProtClustDB:CLSN2684438
Genevestigator:Q680P8 GermOnline:AT3G43980 Uniprot:Q680P8
Length = 56
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
MGHSNVWNSHPK YGPGSR CRVCGN H +IRKYGL CCRQCFRSNAKEIGF+KYR
Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
>TAIR|locus:2097154 [details] [associations]
symbol:AT3G44010 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
InterPro:IPR001209 Pfam:PF00253 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0006412 GO:GO:0003735 EMBL:AL031032
EMBL:AL163975 GO:GO:0022627 eggNOG:COG0199 HOGENOM:HOG000231300
KO:K02980 OMA:WFSHPRN EMBL:AK118617 EMBL:AF324695 EMBL:AF326888
EMBL:AF349528 EMBL:AF361851 EMBL:AY129480 EMBL:BT002766
EMBL:BT004344 EMBL:AF325031 EMBL:AK175132 EMBL:AK175152
EMBL:AK175172 EMBL:AK175173 EMBL:AK175283 EMBL:AK175731
EMBL:AK175739 EMBL:AK175819 EMBL:AK175918 EMBL:AK176060
EMBL:AK176070 EMBL:AK176294 EMBL:AK176295 EMBL:AK176322
EMBL:AK176332 EMBL:AK176439 EMBL:AK176861 EMBL:AK228020
EMBL:BT028875 EMBL:AY088245 EMBL:AY086767 EMBL:AY086371
IPI:IPI00534637 PIR:T48952 RefSeq:NP_189984.1 RefSeq:NP_189987.1
RefSeq:NP_567938.1 UniGene:At.20223 UniGene:At.20445
UniGene:At.43007 ProteinModelPortal:Q680P8 SMR:Q680P8 IntAct:Q680P8
STRING:Q680P8 PaxDb:Q680P8 PRIDE:Q680P8 EnsemblPlants:AT3G43980.1
EnsemblPlants:AT3G44010.1 EnsemblPlants:AT4G33865.1 GeneID:823515
GeneID:823518 GeneID:829529 KEGG:ath:AT3G43980 KEGG:ath:AT3G44010
KEGG:ath:AT4G33865 TAIR:At3g43980 TAIR:At3g44010 TAIR:At4g33865
InParanoid:Q680P8 PhylomeDB:Q680P8 ProtClustDB:CLSN2684438
Genevestigator:Q680P8 GermOnline:AT3G43980 Uniprot:Q680P8
Length = 56
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
MGHSNVWNSHPK YGPGSR CRVCGN H +IRKYGL CCRQCFRSNAKEIGF+KYR
Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
>TAIR|locus:505006550 [details] [associations]
symbol:AT4G33865 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
InterPro:IPR001209 Pfam:PF00253 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0006412 GO:GO:0003735 EMBL:AL031032
EMBL:AL163975 GO:GO:0022627 eggNOG:COG0199 HOGENOM:HOG000231300
KO:K02980 OMA:WFSHPRN EMBL:AK118617 EMBL:AF324695 EMBL:AF326888
EMBL:AF349528 EMBL:AF361851 EMBL:AY129480 EMBL:BT002766
EMBL:BT004344 EMBL:AF325031 EMBL:AK175132 EMBL:AK175152
EMBL:AK175172 EMBL:AK175173 EMBL:AK175283 EMBL:AK175731
EMBL:AK175739 EMBL:AK175819 EMBL:AK175918 EMBL:AK176060
EMBL:AK176070 EMBL:AK176294 EMBL:AK176295 EMBL:AK176322
EMBL:AK176332 EMBL:AK176439 EMBL:AK176861 EMBL:AK228020
EMBL:BT028875 EMBL:AY088245 EMBL:AY086767 EMBL:AY086371
IPI:IPI00534637 PIR:T48952 RefSeq:NP_189984.1 RefSeq:NP_189987.1
RefSeq:NP_567938.1 UniGene:At.20223 UniGene:At.20445
UniGene:At.43007 ProteinModelPortal:Q680P8 SMR:Q680P8 IntAct:Q680P8
STRING:Q680P8 PaxDb:Q680P8 PRIDE:Q680P8 EnsemblPlants:AT3G43980.1
EnsemblPlants:AT3G44010.1 EnsemblPlants:AT4G33865.1 GeneID:823515
GeneID:823518 GeneID:829529 KEGG:ath:AT3G43980 KEGG:ath:AT3G44010
KEGG:ath:AT4G33865 TAIR:At3g43980 TAIR:At3g44010 TAIR:At4g33865
InParanoid:Q680P8 PhylomeDB:Q680P8 ProtClustDB:CLSN2684438
Genevestigator:Q680P8 GermOnline:AT3G43980 Uniprot:Q680P8
Length = 56
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
MGHSNVWNSHPK YGPGSR CRVCGN H +IRKYGL CCRQCFRSNAKEIGF+KYR
Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
>ZFIN|ZDB-GENE-040622-5 [details] [associations]
symbol:rps29 "ribosomal protein S29" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0048821 "erythrocyte development" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IMP] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0051726 "regulation of cell cycle" evidence=IMP]
InterPro:IPR001209 InterPro:IPR018271 Pfam:PF00253 PROSITE:PS00527
ZFIN:ZDB-GENE-040622-5 GO:GO:0006412 GO:GO:0001525 GO:GO:0005840
GO:GO:0009790 GO:GO:0051726 GO:GO:0060218 GO:GO:0003735
GO:GO:0001570 GO:GO:0048821 GO:GO:0072332 eggNOG:COG0199
GeneTree:ENSGT00390000005814 HOGENOM:HOG000231300 KO:K02980
OMA:WFSHPRN CTD:6235 HOVERGEN:HBG004459 OrthoDB:EOG46HGCC
EMBL:CU633785 EMBL:BC091557 EMBL:AY561513 IPI:IPI00513071
RefSeq:NP_998118.1 UniGene:Dr.104578 SMR:Q6Q419 STRING:Q6Q419
Ensembl:ENSDART00000060444 GeneID:405889 KEGG:dre:405889
InParanoid:Q6Q419 NextBio:20817850 Uniprot:Q6Q419
Length = 56
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 36/54 (66%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ YG GSR+CRVC N H +IRKYGL CRQCFR AK+IGFVK
Sbjct: 1 MGHQQLYWSHPRKYGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54
>UNIPROTKB|E1C3G8 [details] [associations]
symbol:RPS29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IEA] InterPro:IPR001209
InterPro:IPR018271 Pfam:PF00253 PROSITE:PS00527 GO:GO:0006412
GO:GO:0008270 GO:GO:0003735 GO:GO:0022627
GeneTree:ENSGT00390000005814 KO:K02980 OMA:WFSHPRN CTD:6235
EMBL:AADN02004021 IPI:IPI00811129 RefSeq:XP_001235087.1
ProteinModelPortal:E1C3G8 SMR:E1C3G8 PRIDE:E1C3G8
Ensembl:ENSGALT00000019972 GeneID:776054 KEGG:gga:776054
NextBio:20922679 Uniprot:E1C3G8
Length = 56
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>UNIPROTKB|P62276 [details] [associations]
symbol:RPS29 "40S ribosomal protein S29" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001209 InterPro:IPR018271 Pfam:PF00253 PROSITE:PS00527
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0199 KO:K02980 EMBL:U66372 EMBL:BC102702 IPI:IPI00715929
RefSeq:NP_777229.1 UniGene:Bt.12831 ProteinModelPortal:P62276
SMR:P62276 STRING:P62276 PRIDE:P62276 GeneID:286884 KEGG:bta:286884
CTD:6235 HOVERGEN:HBG004459 InParanoid:P62276 OrthoDB:EOG46HGCC
NextBio:20806530 Uniprot:P62276
Length = 56
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>UNIPROTKB|P62273 [details] [associations]
symbol:RPS29 "40S ribosomal protein S29" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0015935 "small ribosomal subunit" evidence=IDA]
[GO:0006412 "translation" evidence=IC;TAS] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001209
InterPro:IPR018271 Pfam:PF00253 PROSITE:PS00527 EMBL:L31610
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0046872 GO:GO:0006413
GO:GO:0008270 GO:GO:0003735 GO:GO:0006415 EMBL:AL139099
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0019083 eggNOG:COG0199 KO:K02980 OMA:WFSHPRN CTD:6235
HOVERGEN:HBG004459 EMBL:U14973 EMBL:AB061847 EMBL:BC015974
EMBL:BC032813 EMBL:BC035313 EMBL:AB007165 IPI:IPI00182289
PIR:S55919 RefSeq:NP_001023.1 RefSeq:NP_001025172.1
UniGene:Hs.156367 ProteinModelPortal:P62273 SMR:P62273
IntAct:P62273 STRING:P62273 PhosphoSite:P62273 DMDM:50403626
PaxDb:P62273 PRIDE:P62273 DNASU:6235 Ensembl:ENST00000245458
Ensembl:ENST00000396020 GeneID:6235 KEGG:hsa:6235 UCSC:uc001wwm.3
GeneCards:GC14M050043 HGNC:HGNC:10419 HPA:HPA004107 MIM:603633
neXtProt:NX_P62273 PharmGKB:PA34826 GenomeRNAi:6235 NextBio:24205
ArrayExpress:P62273 Bgee:P62273 CleanEx:HS_RPS29
Genevestigator:P62273 GermOnline:ENSG00000125385 Uniprot:P62273
Length = 56
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>UNIPROTKB|F2Z5R7 [details] [associations]
symbol:RPS29 "40S ribosomal protein S29" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001209 InterPro:IPR018271
Pfam:PF00253 PROSITE:PS00527 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GeneTree:ENSGT00390000005814 OMA:WFSHPRN
EMBL:CU633502 ProteinModelPortal:F2Z5R7 SMR:F2Z5R7 PRIDE:F2Z5R7
Ensembl:ENSSSCT00000005518 Uniprot:F2Z5R7
Length = 56
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>MGI|MGI:107681 [details] [associations]
symbol:Rps29 "ribosomal protein S29" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=ISO;ISA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=ISO;ISA]
[GO:0015935 "small ribosomal subunit" evidence=ISO] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO;ISA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001209 InterPro:IPR018271
Pfam:PF00253 PROSITE:PS00527 MGI:MGI:107681 GO:GO:0046872
GO:GO:0006412 GO:GO:0008270 GO:GO:0003735 GO:GO:0022627
eggNOG:COG0199 GeneTree:ENSGT00390000005814 KO:K02980 OMA:WFSHPRN
CTD:6235 HOVERGEN:HBG004459 OrthoDB:EOG46HGCC EMBL:L31609
EMBL:AK002939 EMBL:AK012285 EMBL:BC024393 EMBL:BC051203
IPI:IPI00222553 PIR:S71578 RefSeq:NP_033119.1 UniGene:Mm.379006
ProteinModelPortal:P62274 SMR:P62274 STRING:P62274
PhosphoSite:P62274 PaxDb:P62274 PRIDE:P62274
Ensembl:ENSMUST00000037023 GeneID:20090 KEGG:mmu:20090
UCSC:uc007nrp.2 InParanoid:P62274 NextBio:297591 Bgee:P62274
CleanEx:MM_RPS29 Genevestigator:P62274
GermOnline:ENSMUSG00000070497 Uniprot:P62274
Length = 56
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>RGD|3596 [details] [associations]
symbol:Rps29 "ribosomal protein S29" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO;IDA;TAS] InterPro:IPR001209 InterPro:IPR018271
Pfam:PF00253 PROSITE:PS00527 RGD:3596 GO:GO:0046872 GO:GO:0006412
GO:GO:0003735 GO:GO:0022627 eggNOG:COG0199
GeneTree:ENSGT00390000005814 KO:K02980 OMA:WFSHPRN CTD:6235
HOVERGEN:HBG004459 OrthoDB:EOG46HGCC EMBL:X59051 EMBL:BC058150
IPI:IPI00231608 PIR:S30298 RefSeq:NP_037008.1 RefSeq:XP_002726952.2
RefSeq:XP_002728082.2 RefSeq:XP_002729850.2 RefSeq:XP_003749639.1
RefSeq:XP_003752725.1 RefSeq:XP_003753859.1 UniGene:Rn.201353
UniGene:Rn.34942 ProteinModelPortal:P62275 SMR:P62275 STRING:P62275
PRIDE:P62275 Ensembl:ENSRNOT00000005577 Ensembl:ENSRNOT00000041384
Ensembl:ENSRNOT00000046690 Ensembl:ENSRNOT00000050726
GeneID:100361445 GeneID:100361876 GeneID:100363434 GeneID:25348
KEGG:rno:100361445 KEGG:rno:100361876 KEGG:rno:100363434
KEGG:rno:25348 UCSC:RGD:3596 InParanoid:P62275 NextBio:606283
Genevestigator:P62275 GermOnline:ENSRNOG00000028939
GermOnline:ENSRNOG00000029443 GermOnline:ENSRNOG00000032542
Uniprot:P62275
Length = 56
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>UNIPROTKB|E1BNY4 [details] [associations]
symbol:LOC100848316 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001209
InterPro:IPR018271 Pfam:PF00253 PROSITE:PS00527 GO:GO:0006412
GO:GO:0008270 GO:GO:0003735 GO:GO:0022627
GeneTree:ENSGT00390000005814 OMA:WFSHPRN EMBL:DAAA02028332
IPI:IPI00687662 Ensembl:ENSBTAT00000014734 NextBio:20926665
Uniprot:E1BNY4
Length = 56
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHRLIRKYGLNMCRQCFRQYAKDIGFIK 54
>SGD|S000004380 [details] [associations]
symbol:RPS29A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001209
InterPro:IPR018271 Pfam:PF00253 PROSITE:PS00527 SGD:S000004380
GO:GO:0046872 EMBL:BK006945 GO:GO:0003735 EMBL:U19729 GO:GO:0002181
RefSeq:NP_013494.3 GeneID:851106 KEGG:sce:YLR390W GO:GO:0022627
PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB
PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C PDBsum:3U5G EMBL:D14676
EMBL:EF123131 PIR:S48503 RefSeq:NP_013492.3
ProteinModelPortal:P41057 SMR:P41057 DIP:DIP-4643N IntAct:P41057
MINT:MINT-475802 STRING:P41057 PeptideAtlas:P41057 PRIDE:P41057
EnsemblFungi:YLR388W GeneID:851104 KEGG:sce:YLR388W
GeneTree:ENSGT00390000005814 HOGENOM:HOG000231300 KO:K02980
OMA:WFSHPRN OrthoDB:EOG4RNFK9 NextBio:967800 Genevestigator:P41057
GermOnline:YLR388W Uniprot:P41057
Length = 56
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H NVW SHP+ YG GSR CRVC + +IRKYGL CRQCFR A +IGF K+R
Sbjct: 1 MAHENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 56
>WB|WBGene00004498 [details] [associations]
symbol:rps-29 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008406
"gonad development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] InterPro:IPR001209 InterPro:IPR018271 Pfam:PF00253
PROSITE:PS00527 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0016477 GO:GO:0008406 GO:GO:0002119 GO:GO:0006412
GO:GO:0010171 GO:GO:0005840 GO:GO:0003735 EMBL:FO080194
eggNOG:COG0199 GeneTree:ENSGT00390000005814 HOGENOM:HOG000231300
KO:K02980 OMA:WFSHPRN PIR:T25449 RefSeq:NP_497263.1
ProteinModelPortal:P90983 SMR:P90983 STRING:P90983 PaxDb:P90983
EnsemblMetazoa:B0412.4.1 EnsemblMetazoa:B0412.4.2 GeneID:175235
KEGG:cel:CELE_B0412.4 UCSC:B0412.4.1 CTD:175235 WormBase:B0412.4
InParanoid:P90983 NextBio:887340 Uniprot:P90983
Length = 56
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MG N+W SHP+ +GPGSR+CRVC H +IRKYGL CR+CFR A++IGF K
Sbjct: 1 MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKK 54
>FB|FBgn0261599 [details] [associations]
symbol:RpS29 "Ribosomal protein S29" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0048666
"neuron development" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001209 InterPro:IPR018271 Pfam:PF00253
PROSITE:PS00527 EMBL:AE014297 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 GO:GO:0048666 GO:GO:0003735 eggNOG:COG0199
GeneTree:ENSGT00390000005814 KO:K02980 OMA:WFSHPRN CTD:6235
EMBL:AY075533 RefSeq:NP_649946.1 UniGene:Dm.14936
ProteinModelPortal:Q9VH69 SMR:Q9VH69 MINT:MINT-986484 STRING:Q9VH69
PaxDb:Q9VH69 PRIDE:Q9VH69 EnsemblMetazoa:FBtr0082136 GeneID:41200
KEGG:dme:Dmel_CG8495 FlyBase:FBgn0261599 InParanoid:Q9VH69
OrthoDB:EOG4NVX35 PhylomeDB:Q9VH69 ChiTaRS:RPS29 GenomeRNAi:41200
NextBio:822690 Bgee:Q9VH69 GermOnline:CG8495 Uniprot:Q9VH69
Length = 56
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 33/54 (61%), Positives = 38/54 (70%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MG + +W SHP+ YG GSR CR C N H +IRKYGL CRQCFR A +IGF K
Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
>SGD|S000002219 [details] [associations]
symbol:RPS29B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;IDA]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0006412
"translation" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001209
InterPro:IPR018271 Pfam:PF00253 PROSITE:PS00527 SGD:S000002219
GO:GO:0046872 EMBL:BK006938 GO:GO:0003735 GO:GO:0002181 PDB:1S1H
PDBsum:1S1H GO:GO:0022627 eggNOG:COG0199 PDB:1K5X PDBsum:1K5X
GeneTree:ENSGT00390000005814 HOGENOM:HOG000231300 KO:K02980
OrthoDB:EOG4RNFK9 EMBL:D14677 EMBL:Z74109 EMBL:EF123148 PIR:S48504
RefSeq:NP_010222.1 ProteinModelPortal:P41058 SMR:P41058
DIP:DIP-5230N IntAct:P41058 MINT:MINT-492502 STRING:P41058
PaxDb:P41058 PeptideAtlas:P41058 EnsemblFungi:YDL061C GeneID:851498
KEGG:sce:YDL061C OMA:YSHPRKF EvolutionaryTrace:P41058
NextBio:968837 Genevestigator:P41058 GermOnline:YDL061C
Uniprot:P41058
Length = 56
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H NVW SHP+ +G GSR CRVC + ++RKY L CRQCFR A +IGF KYR
Sbjct: 1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 56
>DICTYBASE|DDB_G0272308 [details] [associations]
symbol:rps29 "40S ribosomal protein S29"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001209
InterPro:IPR018271 Pfam:PF00253 PROSITE:PS00527
dictyBase:DDB_G0272308 GO:GO:0005615 GO:GO:0046872 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000008 eggNOG:COG0199 KO:K02980 OMA:WFSHPRN
RefSeq:XP_645130.1 ProteinModelPortal:Q76P36 SMR:Q76P36
STRING:Q76P36 EnsemblProtists:DDB0231066 GeneID:8618300
KEGG:ddi:DDB_G0272308 ProtClustDB:PTZ00218 Uniprot:Q76P36
Length = 55
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 6 VWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
+W +HP+ +GPGSR CR CGN H IIRKY L CR+CFR++A+ IGF KYR
Sbjct: 5 LWLTHPRNFGPGSRTCRKCGNHHGIIRKYDLNMCRRCFRTDAEAIGFNKYR 55
>UNIPROTKB|Q6QAP6 [details] [associations]
symbol:RPS29 "40S ribosomal protein S29" species:9823 "Sus
scrofa" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001209 InterPro:IPR018271 Pfam:PF00253 PROSITE:PS00527
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0199 KO:K02980 CTD:6235 HOVERGEN:HBG004459
OrthoDB:EOG46HGCC EMBL:AY550074 RefSeq:NP_001001633.1
UniGene:Ssc.59356 ProteinModelPortal:Q6QAP6 SMR:Q6QAP6
STRING:Q6QAP6 GeneID:414391 KEGG:ssc:414391 Uniprot:Q6QAP6
Length = 56
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MG + SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGPQGFYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>ASPGD|ASPL0000011385 [details] [associations]
symbol:AN11411 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001209 InterPro:IPR018271 Pfam:PF00253
PROSITE:PS00527 GO:GO:0006412 GO:GO:0005840 EMBL:BN001302
GO:GO:0003735 HOGENOM:HOG000231300 OMA:WFSHPRN
EnsemblFungi:CADANIAT00005015 Uniprot:C8V7J5
Length = 56
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H +VW S P+ YG GSR CRVC + +IRKYG+ CRQCFR A +IGF K+R
Sbjct: 1 MTHESVWYSRPRKYGKGSRQCRVCAHRAGLIRKYGMDICRQCFREKASDIGFFKFR 56
>UNIPROTKB|I3LJY0 [details] [associations]
symbol:LOC100621081 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001209 Pfam:PF00253
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00390000005814 EMBL:CU633507 EMBL:CU467734
RefSeq:XP_003121633.1 RefSeq:XP_003353438.1 RefSeq:XP_003361457.1
Ensembl:ENSSSCT00000026059 Ensembl:ENSSSCT00000027825
GeneID:100516770 GeneID:100621054 GeneID:100621081
KEGG:ssc:100516770 KEGG:ssc:100621054 KEGG:ssc:100621081
OMA:YRSHPRK Uniprot:I3LJY0
Length = 56
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+C VC N H++IRKYGL CRQ F AK+IGF++
Sbjct: 1 MGHQQLYRSHPRKFGQGSRSCHVCSNLHSLIRKYGLNMCRQYFCQYAKDIGFIE 54
>POMBASE|SPBC1685.09 [details] [associations]
symbol:rps29 "40S ribosomal protein S29 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] InterPro:IPR001209 Pfam:PF00253 PROSITE:PS00527
PomBase:SPBC1685.09 GO:GO:0005634 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022627
eggNOG:COG0199 HOGENOM:HOG000231300 KO:K02980 OrthoDB:EOG4RNFK9
OMA:YSHPRKF PIR:T39525 RefSeq:NP_595213.1 ProteinModelPortal:O74329
SMR:O74329 IntAct:O74329 STRING:O74329 PRIDE:O74329
EnsemblFungi:SPBC1685.09.1 GeneID:2539643 KEGG:spo:SPBC1685.09
NextBio:20800797 Uniprot:O74329
Length = 56
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 33/56 (58%), Positives = 36/56 (64%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H NVW SHP+ YG GSR C G +IRKYGL RQ FR A +IGFVKYR
Sbjct: 1 MAHENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVKYR 56
>RGD|1585590 [details] [associations]
symbol:LOC684806 "similar to 40S ribosomal protein S29"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001209 Pfam:PF00253 RGD:1585590 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GeneTree:ENSGT00390000005814
IPI:IPI00958773 RefSeq:XP_001072008.3 RefSeq:XP_002728320.2
Ensembl:ENSRNOT00000051764 GeneID:684806 KEGG:rno:684806
UCSC:RGD:1585590 OMA:NCHGLIR Uniprot:D4A072
Length = 56
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP +G GS + VC N H +IRKYGL C QCFR K++GF+K
Sbjct: 1 MGHQQLYWSHPWKFGQGSCSRHVCSNCHGLIRKYGLNVCGQCFRQYVKDMGFIK 54
>UNIPROTKB|I3LS69 [details] [associations]
symbol:LOC100736624 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001209 Pfam:PF00253
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00390000005814 EMBL:CU928091 EMBL:FP565381
RefSeq:XP_003123598.1 RefSeq:XP_003480788.1
Ensembl:ENSSSCT00000025089 Ensembl:ENSSSCT00000030646
GeneID:100512948 GeneID:100736624 KEGG:ssc:100512948
KEGG:ssc:100736624 OMA:RSCHLCS Uniprot:I3LS69
Length = 56
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ HP+ +G GSR+C +C N H +I+KY L QCF AK+IGF+K
Sbjct: 1 MGHQQLYWRHPRKFGQGSRSCHLCSNWHGLIQKYRLNMSGQCFCQYAKDIGFIK 54
>UNIPROTKB|F1SJZ7 [details] [associations]
symbol:LOC100738227 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001209 Pfam:PF00253
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00390000005814 EMBL:CU468846 RefSeq:XP_003482283.1
Ensembl:ENSSSCT00000002079 GeneID:100738227 KEGG:ssc:100738227
Uniprot:F1SJZ7
Length = 56
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SH + +G GSR+C VC N H +IRKY L C Q F + K+ GF++
Sbjct: 1 MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIR 54
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.140 0.502 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 56 56 0.00091 102 3 12 22 0.44 27
29 0.42 27
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 462 (49 KB)
Total size of DFA: 83 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 5.75u 0.15s 5.90t Elapsed: 00:00:01
Total cpu time: 5.75u 0.15s 5.90t Elapsed: 00:00:01
Start: Sat May 11 07:05:02 2013 End: Sat May 11 07:05:03 2013