BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037282
(56 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q680P8|RS29_ARATH 40S ribosomal protein S29 OS=Arabidopsis thaliana GN=RPS29A PE=3
SV=2
Length = 56
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 51/56 (91%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
MGHSNVWNSHPK YGPGSR CRVCGN H +IRKYGL CCRQCFRSNAKEIGF+KYR
Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
>sp|Q5I7K3|RS29_WHEAT 40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=1 SV=1
Length = 56
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 51/56 (91%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
MGHSNVWNSHPK YG GSR CRVCGN H +IRKYGLMCCRQCFRS+AK+IGF+KYR
Sbjct: 1 MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56
>sp|Q7XYB0|RS29_GRIJA 40S ribosomal protein S29 OS=Griffithsia japonica GN=RPS29 PE=3
SV=1
Length = 56
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
MGH N+W SHP+ YG GSR+C++CGN H +IRKY + CRQCFR AK+IGF+KYR
Sbjct: 1 MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56
>sp|Q98SC7|RS29_GUITH 40S ribosomal protein S29A OS=Guillardia theta GN=rps29A PE=3
SV=1
Length = 56
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 41/56 (73%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H N+WN H +TYG GSR CR+CGN +IRKYGL CRQCFR ++ +GF KYR
Sbjct: 1 MSHKNIWNKHSRTYGKGSRGCRICGNRSGLIRKYGLSICRQCFREKSQNLGFDKYR 56
>sp|Q4PM47|RS29_IXOSC 40S ribosomal protein S29 OS=Ixodes scapularis GN=RpS29 PE=3 SV=1
Length = 56
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 41/54 (75%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH N+W SHP+ YGPGSR CRVC N H +IRKYGL CR+CFR A +IGF K
Sbjct: 1 MGHENIWYSHPRKYGPGSRYCRVCANHHGLIRKYGLNICRRCFRQYAADIGFKK 54
>sp|Q6F473|RS29_PLUXY 40S ribosomal protein S29 OS=Plutella xylostella GN=RpS29 PE=3
SV=1
Length = 56
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 41/54 (75%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH+N+W SHP+ YG GSR+CR C N H +IRKYGL CRQCFR A +IGF K
Sbjct: 1 MGHANIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
>sp|Q4LAY1|RS29_SCALT 40S ribosomal protein S29 OS=Scarabaeus laticollis GN=RpS29 PE=3
SV=1
Length = 56
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 40/54 (74%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH N+W SHP+ YG GSR+CR C N H +IRKYGL CRQCFR A +IGF K
Sbjct: 1 MGHQNIWYSHPRKYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
>sp|Q8WQI3|RS29_SPOFR 40S ribosomal protein S29 OS=Spodoptera frugiperda GN=RpS29 PE=3
SV=1
Length = 56
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 41/54 (75%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH+N+W SHP+ YG GSR+CR C N H +IRKYGL CRQCFR A +IGF K
Sbjct: 1 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
>sp|Q5EMX3|RS29_MAGO7 40S ribosomal protein S29 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=RPS29 PE=3 SV=1
Length = 56
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 43/56 (76%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H +VWNS P+TYG G+R+CRVC + +IRKYGL CRQCFR A +IGFVK+R
Sbjct: 1 MSHDSVWNSRPRTYGKGARSCRVCTHRAGLIRKYGLDICRQCFREKAADIGFVKHR 56
>sp|Q9C2P2|RS29_NEUCR 40S ribosomal protein S29 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rps-29 PE=3 SV=1
Length = 56
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H +VWNS P+TYG GSR+CRVC + +IRKYGL CRQCFR A +IGF K+R
Sbjct: 1 MSHESVWNSRPRTYGKGSRSCRVCTHSAGLIRKYGLNICRQCFREKANDIGFTKHR 56
>sp|Q5UAL3|RS29_BOMMO 40S ribosomal protein S29 OS=Bombyx mori GN=RpS29 PE=3 SV=1
Length = 56
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 41/54 (75%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH+N+W SHP+ YG GSR+CR C N H +IRKYGL CRQCFR A +IGF K
Sbjct: 1 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
>sp|Q757G1|RS29_ASHGO 40S ribosomal protein S29 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPS29 PE=3
SV=1
Length = 56
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 40/56 (71%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H NVW SHP+ YG GSR CRVC + +IRKYGL CRQCFR A +IGF KYR
Sbjct: 1 MAHENVWFSHPRNYGKGSRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56
>sp|Q90YP2|RS29_ICTPU 40S ribosomal protein S29 OS=Ictalurus punctatus GN=rps29 PE=3
SV=3
Length = 56
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGFVK
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54
>sp|Q6UZG0|RS29_HIPCM 40S ribosomal protein S29 OS=Hippocampus comes GN=rps29 PE=3 SV=3
Length = 56
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGFVK
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54
>sp|Q56FL2|RS29_LYSTE 40S ribosomal protein S29 OS=Lysiphlebus testaceipes GN=RpS29
PE=3 SV=1
Length = 56
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 39/54 (72%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MG N+W SHP+ YG GSR+CR C N H IIRKYGL CRQCFR A +IGF K
Sbjct: 1 MGFENIWFSHPRKYGQGSRSCRSCANKHGIIRKYGLNICRQCFREYASDIGFKK 54
>sp|P62275|RS29_RAT 40S ribosomal protein S29 OS=Rattus norvegicus GN=Rps29 PE=1 SV=2
Length = 56
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>sp|Q5R9J0|RS29_PONAB 40S ribosomal protein S29 OS=Pongo abelii GN=RPS29 PE=3 SV=1
Length = 56
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>sp|P62274|RS29_MOUSE 40S ribosomal protein S29 OS=Mus musculus GN=Rps29 PE=2 SV=2
Length = 56
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>sp|P62273|RS29_HUMAN 40S ribosomal protein S29 OS=Homo sapiens GN=RPS29 PE=1 SV=2
Length = 56
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>sp|P62276|RS29_BOVIN 40S ribosomal protein S29 OS=Bos taurus GN=RPS29 PE=3 SV=2
Length = 56
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH ++ SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>sp|P41057|RS29A_YEAST 40S ribosomal protein S29-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS29A PE=1 SV=3
Length = 56
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 40/56 (71%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H NVW SHP+ YG GSR CRVC + +IRKYGL CRQCFR A +IGF K+R
Sbjct: 1 MAHENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 56
>sp|Q9NB51|RS29_CULQU 40S ribosomal protein S29 OS=Culex quinquefasciatus GN=RpS29 PE=3
SV=1
Length = 56
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MG +++W SHP+ YG GSR CR C N H +IRKYGL CRQCFR AK+IGF K
Sbjct: 1 MGFADLWYSHPRKYGQGSRFCRACSNNHGMIRKYGLNICRQCFREYAKDIGFRK 54
>sp|Q5MGJ4|RS29_LONON 40S ribosomal protein S29 OS=Lonomia obliqua GN=RpS29 PE=3 SV=1
Length = 56
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MGH+N+W SHP+ Y GSR+CR C N H +IRKYGL CRQCFR A +IGF K
Sbjct: 1 MGHANIWYSHPRRYCQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
>sp|Q6FWE3|RS29_CANGA 40S ribosomal protein S29 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPS29
PE=3 SV=1
Length = 56
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 39/56 (69%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H NVW SHP+ +G GSR CRVC + +IRKY L CRQCFR A +IGF KYR
Sbjct: 1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLIRKYDLNICRQCFRERASDIGFNKYR 56
>sp|P41058|RS29B_YEAST 40S ribosomal protein S29-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS29B PE=1 SV=3
Length = 56
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H NVW SHP+ +G GSR CRVC + ++RKY L CRQCFR A +IGF KYR
Sbjct: 1 MAHENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 56
>sp|Q76P36|RS29_DICDI 40S ribosomal protein S29 OS=Dictyostelium discoideum GN=rps29
PE=3 SV=1
Length = 55
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 5 NVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
+W +HP+ +GPGSR CR CGN H IIRKY L CR+CFR++A+ IGF KYR
Sbjct: 4 ELWLTHPRNFGPGSRTCRKCGNHHGIIRKYDLNMCRRCFRTDAEAIGFNKYR 55
>sp|Q9VH69|RS29_DROME 40S ribosomal protein S29 OS=Drosophila melanogaster GN=RpS29
PE=3 SV=1
Length = 56
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 38/54 (70%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MG + +W SHP+ YG GSR CR C N H +IRKYGL CRQCFR A +IGF K
Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
>sp|Q6CPG3|RS29_KLULA 40S ribosomal protein S29 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=RPS29 PE=3 SV=1
Length = 56
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H NVW SHP+ +G GSR CR+ G+ +IRKYGL RQ FR A +IGF KYR
Sbjct: 1 MAHENVWYSHPRKFGKGSRQCRISGSHSGLIRKYGLNIDRQSFREKANDIGFYKYR 56
>sp|Q6BY86|RS29_DEBHA 40S ribosomal protein S29 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RPS29 PE=3 SV=1
Length = 56
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H +VW SHP+ +G GSR CRVC + +IRKY L CRQCFR A +IGF K+R
Sbjct: 1 MAHESVWFSHPRNFGKGSRQCRVCSSHSGLIRKYDLNICRQCFRERASDIGFNKFR 56
>sp|Q6QAP6|RS29_PIG 40S ribosomal protein S29 OS=Sus scrofa GN=RPS29 PE=3 SV=3
Length = 56
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
MG + SHP+ +G GSR+CRVC N H +IRKYGL CRQCFR AK+IGF+K
Sbjct: 1 MGPQGFYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54
>sp|O74329|RS29_SCHPO 40S ribosomal protein S29 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps29 PE=3 SV=3
Length = 56
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 36/56 (64%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
M H NVW SHP+ YG GSR C G +IRKYGL RQ FR A +IGFVKYR
Sbjct: 1 MAHENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVKYR 56
>sp|Q8TW16|RS14Z_METKA 30S ribosomal protein S14 type Z OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=rps14 PE=3
SV=1
Length = 48
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 12 KTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
+ +G G+R CR CG+ H +I+KYG+M CRQCFR A+++GF KY
Sbjct: 4 REFGKGARRCRRCGDTHGVIQKYGIMLCRQCFREVAEKMGFKKY 47
>sp|O26125|RS14Z_METTH 30S ribosomal protein S14 type Z OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps14 PE=3 SV=1
Length = 50
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 11 PKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
P+ YG SR C CG+ A++R+YGLM CRQCFR A +IGF KY
Sbjct: 5 PRKYGKASRKCSRCGDHSALVRRYGLMLCRQCFRELAPKIGFKKY 49
>sp|Q2NFX1|RS14Z_METST 30S ribosomal protein S14 type Z OS=Methanosphaera stadtmanae
(strain DSM 3091) GN=rps14 PE=3 SV=1
Length = 47
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 11 PKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
+ YG +R C CG+ AI+R+YGL CRQCFR A +IGF KY
Sbjct: 2 ARKYGKAARKCSRCGDHSAIVRRYGLNLCRQCFREIAPKIGFKKY 46
>sp|Q97ZQ5|RS14Z_SULSO 30S ribosomal protein S14 type Z OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
GN=rps14 PE=3 SV=2
Length = 54
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 12 KTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
+ YG G ++C+ CG+ ++I+KYG+ CRQCFR A E+GF KY
Sbjct: 10 RKYGKGVQSCQRCGSKDSVIQKYGIYLCRQCFREVAYELGFRKY 53
>sp|Q975J4|RS14Z_SULTO 30S ribosomal protein S14 type Z OS=Sulfolobus tokodaii (strain
DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=rps14 PE=3
SV=2
Length = 54
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 12 KTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
+ YG G + CR CG+ ++I+KYGL CRQCFR A E+GF K R
Sbjct: 10 RKYGRGVQVCRRCGSRDSVIQKYGLYLCRQCFREVAYEMGFKKTR 54
>sp|Q5JJG2|RS14Z_PYRKO 30S ribosomal protein S14 type Z OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=rps14 PE=3
SV=1
Length = 56
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
M ++ P+ +G G+R C CG IIR +GLM CR CFR A ++GF KY
Sbjct: 1 MAKADYNKRKPRKFGKGARRCMRCGQYGPIIRIHGLMLCRHCFREVAPKLGFKKY 55
>sp|P58731|RS14Z_AERPE 30S ribosomal protein S14 type Z OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=rps14 PE=3 SV=1
Length = 54
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 4 SNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
+ + PK G G++ C+ CG A+I+KYGL CRQCFR A +GF K R
Sbjct: 2 AKIRPPKPKRMGRGAQRCQRCGTRDAVIQKYGLYLCRQCFREIAPTLGFRKNR 54
>sp|P62013|RS14Z_PYRHO 30S ribosomal protein S14 type Z OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 /
OT-3) GN=rps14 PE=3 SV=1
Length = 56
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
M ++ P+ +G G+R C CG IIR +GLM CR CFR A ++GF KY
Sbjct: 1 MAKADYNKRKPRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKY 55
>sp|P62012|RS14Z_PYRAB 30S ribosomal protein S14 type Z OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=rps14 PE=3 SV=1
Length = 56
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
M ++ P+ +G G+R C CG IIR +GLM CR CFR A ++GF KY
Sbjct: 1 MAKADYNKRKPRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKY 55
>sp|Q8U013|RS14Z_PYRFU 30S ribosomal protein S14 type Z OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps14 PE=1
SV=1
Length = 56
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
M ++ P+ +G G+R C CG IIR GLM CR CFR A ++GF KY
Sbjct: 1 MAKADYNKRKPRKFGKGARRCIRCGQYGPIIRIQGLMLCRHCFREVAPKLGFRKY 55
>sp|P14041|RS14Z_METVA 30S ribosomal protein S14 type Z OS=Methanococcus vannielii
GN=rps14 PE=3 SV=1
Length = 53
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 14 YGPGSRACRVCGNPH-AIIRKYGLMCCRQCFRSNAKEIGFVKY 55
YG GS+ C+ CG IIRKYGL CRQCFR A ++GF KY
Sbjct: 10 YGQGSKVCKRCGRKGPGIIRKYGLDLCRQCFRELAPKLGFKKY 52
>sp|Q12ZT7|RS14Z_METBU 30S ribosomal protein S14 type Z OS=Methanococcoides burtonii
(strain DSM 6242) GN=rps14 PE=3 SV=1
Length = 50
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 12 KTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
K +G G+ C+ CG ++RKYG+ CR CFR A ++GF KY
Sbjct: 6 KNFGRGANECKRCGRKQGLVRKYGIYLCRHCFREIAHDMGFEKY 49
>sp|Q6LXD9|RS14Z_METMP 30S ribosomal protein S14 type Z OS=Methanococcus maripaludis
(strain S2 / LL) GN=rps14 PE=3 SV=1
Length = 53
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 14 YGPGSRACRVCGNPH-AIIRKYGLMCCRQCFRSNAKEIGFVKY 55
YG GS+ C+ CG IIRKYGL CRQCFR A ++GF KY
Sbjct: 10 YGQGSKVCKRCGRKGPGIIRKYGLNLCRQCFRELAPKLGFKKY 52
>sp|Q74NE6|RS14Z_NANEQ 30S ribosomal protein S14 type Z OS=Nanoarchaeum equitans (strain
Kin4-M) GN=rps14 PE=3 SV=1
Length = 69
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 11 PKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
+ +G G+R C CG IIR+YGL C+ CF+ A E+GF K+
Sbjct: 23 ERKFGKGARRCERCGRYDGIIRRYGLYLCKDCFKEVAHELGFFKW 67
>sp|Q97BW2|RS14Z_THEVO 30S ribosomal protein S14 type Z OS=Thermoplasma volcanium
(strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 /
GSS1) GN=rps14 PE=3 SV=1
Length = 53
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 4 SNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
S V K YG C CG I+RKYGL CRQCFR A+++GF KY
Sbjct: 2 SQVKLQPKKKYGHID-GCVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEKY 52
>sp|Q8ZVW1|RS14Z_PYRAE 30S ribosomal protein S14 type Z OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=rps14 PE=3 SV=1
Length = 54
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 12 KTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
+ YG C CG A+IRKYGL CR+CFR A ++GF KY
Sbjct: 10 RPYGKSKIRCLRCGTREAVIRKYGLYLCRRCFREVAPQLGFKKY 53
>sp|Q9HIS1|RS14Z_THEAC 30S ribosomal protein S14 type Z OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=rps14 PE=3 SV=1
Length = 53
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 4 SNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKY 55
S V K YG C CG I+R+YGL CRQCFR A+++GF KY
Sbjct: 2 SQVKLKPKKKYGHID-GCVRCGRKRGIVRRYGLHLCRQCFRETARQLGFEKY 52
>sp|Q2FSG1|RS14Z_METHJ 30S ribosomal protein S14 type Z OS=Methanospirillum hungatei
(strain JF-1 / DSM 864) GN=rps14 PE=3 SV=1
Length = 56
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 1 MGHSNVWNSHPKTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 54
M + K +G GS C +CG ++R+Y + CRQCFR A ++GF K
Sbjct: 1 MANIKAGKERTKIFGRGSHECLLCGRKQGLVRRYNIFFCRQCFREWAPKMGFKK 54
>sp|O05635|RS14Z_SULAC 30S ribosomal protein S14 type Z OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=rps14 PE=3 SV=2
Length = 54
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 12 KTYGPGSRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 56
+ +G G + C+ CG+ ++I+KYGL CRQCFR A +GF K R
Sbjct: 10 RRFGKGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRKTR 54
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.502
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,630,919
Number of Sequences: 539616
Number of extensions: 685546
Number of successful extensions: 2460
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 2289
Number of HSP's gapped (non-prelim): 365
length of query: 56
length of database: 191,569,459
effective HSP length: 29
effective length of query: 27
effective length of database: 175,920,595
effective search space: 4749856065
effective search space used: 4749856065
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)