BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037283
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WMV8|PHF5B_ARATH PHD finger-like domain-containing protein 5B OS=Arabidopsis
thaliana GN=At1g07170 PE=2 SV=1
Length = 110
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/102 (97%), Positives = 102/102 (100%)
Query: 35 LLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISD 94
++CRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISD
Sbjct: 9 IMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISD 68
Query: 95 AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 136
AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR
Sbjct: 69 AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
>sp|P0DI19|PHF5A_ARATH PHD finger-like domain-containing protein 5A OS=Arabidopsis
thaliana GN=At2g30000 PE=2 SV=1
Length = 110
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/102 (97%), Positives = 102/102 (100%)
Query: 35 LLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISD 94
++CRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISD
Sbjct: 9 IMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISD 68
Query: 95 AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 136
AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR
Sbjct: 69 AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
>sp|P83871|PHF5A_RAT PHD finger-like domain-containing protein 5A OS=Rattus norvegicus
GN=Phf5a PE=2 SV=1
Length = 110
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/102 (90%), Positives = 98/102 (96%)
Query: 35 LLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISD 94
+ CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SD
Sbjct: 9 IFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSD 68
Query: 95 AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 136
AYYCKECT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct: 69 AYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
>sp|P83870|PHF5A_MOUSE PHD finger-like domain-containing protein 5A OS=Mus musculus
GN=Phf5a PE=1 SV=1
Length = 110
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/102 (90%), Positives = 98/102 (96%)
Query: 35 LLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISD 94
+ CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SD
Sbjct: 9 IFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSD 68
Query: 95 AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 136
AYYCKECT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct: 69 AYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
>sp|Q7RTV0|PHF5A_HUMAN PHD finger-like domain-containing protein 5A OS=Homo sapiens
GN=PHF5A PE=1 SV=1
Length = 110
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/102 (90%), Positives = 98/102 (96%)
Query: 35 LLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISD 94
+ CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SD
Sbjct: 9 IFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSD 68
Query: 95 AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 136
AYYCKECT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR
Sbjct: 69 AYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
>sp|Q9VMC8|PHF5_DROME Uncharacterized protein CG9548 OS=Drosophila melanogaster GN=CG9548
PE=3 SV=2
Length = 111
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/101 (88%), Positives = 96/101 (95%)
Query: 35 LLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISD 94
+ CRKQPG+AIGRLCEK DGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SD
Sbjct: 9 IFCRKQPGVAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSD 68
Query: 95 AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKK 135
AYYCK CT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFK+
Sbjct: 69 AYYCKSCTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKQ 109
>sp|Q9UTB8|INI1_SCHPO Pre-mRNA-splicing factor ini1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ini1 PE=3 SV=1
Length = 117
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 83/97 (85%)
Query: 35 LLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISD 94
+LCR+QPGI +G+LCE+CD KC ICDS+VRP TLVR+CDEC +GS Q RC+ICG G+SD
Sbjct: 9 VLCRRQPGITVGKLCERCDEKCPICDSHVRPTTLVRICDECAFGSSQDRCIICGAPGVSD 68
Query: 95 AYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKY 131
YYC ECT+ E DRDGCP+++NLGS++TD FYERKK+
Sbjct: 69 CYYCSECTRMEYDRDGCPRVINLGSSRTDWFYERKKF 105
>sp|Q06835|RDS3_YEAST Pre-mRNA-splicing factor RDS3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RDS3 PE=1 SV=1
Length = 107
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 35 LLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICG-GVGIS 93
++C KQPG+ G LCEKCDGKC ICDSYVRP VRVC+ C++G C+IC VG++
Sbjct: 9 IMCLKQPGVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGVN 68
Query: 94 DAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKK 130
DA+YC EC + KD+DGCP+I+NLGS + D +E+KK
Sbjct: 69 DAFYCWECCRLGKDKDGCPRILNLGSNRLDRHFEKKK 105
>sp|A2SU54|DP2L_METLZ DNA polymerase II large subunit OS=Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z) GN=polC PE=3 SV=1
Length = 1141
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 70 RVCDECNYGSFQGRCVICGGVGISDAYYCKECTQ-QEKDRDGCPKI-VNLGSAKTDLFYE 127
R C +C +F+ RC C G Y C C Q E+ ++ CPK NL +K +
Sbjct: 642 RRCPKCGTVTFKSRCADC-GTHTDAVYRCPHCNQLGEEGQESCPKCGANLVCSKESIVSL 700
Query: 128 RKKYG 132
++Y
Sbjct: 701 GQEYA 705
>sp|Q86XJ1|GA2L3_HUMAN GAS2-like protein 3 OS=Homo sapiens GN=GAS2L3 PE=1 SV=1
Length = 694
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 25 QADVSIWTSSLLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRC 84
Q D+SIW S LL K + +L E+ D ++C +V+ C+ G+F R
Sbjct: 51 QEDLSIWLSGLLGIK---VKAEKLLEELDNGVLLCQLIDVLQNMVKTCNSEESGNFPMRK 107
Query: 85 VICGGVGISDAYYCKECT 102
V C S +++ ++ T
Sbjct: 108 VPCKKDAASGSFFARDNT 125
>sp|Q9HMX8|DP2L_HALSA DNA polymerase II large subunit OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=polC PE=3 SV=1
Length = 1370
Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 70 RVCDECNYGSFQGRCVICGGVGISDAYY-CKEC----TQQEKDRDGCP 112
RVC C+ +++ RC CG +D +Y C++C T E R CP
Sbjct: 675 RVCPSCDEHTYESRCPDCG--DWTDPHYECRDCGAVATPDESGRVECP 720
>sp|P51559|BLI4_CAEEL Endoprotease bli-4 OS=Caenorhabditis elegans GN=bli-4 PE=2 SV=2
Length = 943
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 54 GKCVICDSYVRPCTL--VRVCDECNYGSFQGR---CVICGGVGISDAYYCKECTQQE 105
GKC +CDS CT C++C+ G +G C C G + ++ C++C++ +
Sbjct: 805 GKCDLCDSSCETCTAPGPMSCEKCSKGYGKGSIGYCRPCCPEGSTKSWQCEDCSKPD 861
>sp|Q3UWW6|GA2L3_MOUSE GAS2-like protein 3 OS=Mus musculus GN=Gas2l3 PE=2 SV=1
Length = 683
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 25 QADVSIWTSSLLCRKQPGIAIG--RLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQG 82
Q D+SIW S LL G+ I RL E+ D ++C +V+ C G+F
Sbjct: 53 QEDLSIWLSGLL-----GVDIKAERLLEELDNGVLLCQLINVLQNMVKGCHSDEPGNFPM 107
Query: 83 RCVICGGVGISDAYYCKECT 102
R V C S +++ ++ T
Sbjct: 108 RKVPCKKDAASGSFFARDNT 127
>sp|Q5S007|LRRK2_HUMAN Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo
sapiens GN=LRRK2 PE=1 SV=2
Length = 2527
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 48 LCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKD 107
LC KC K V D Y++ L R CD+ N S C++ G + A Q +
Sbjct: 694 LCCKCFAK-VAMDDYLKNVMLERACDQNN--SIMVECLLLLGADANQAKEGSSLICQVCE 750
Query: 108 RDGCPKIVNL----GSAKTDL 124
++ PK+V L GS + D+
Sbjct: 751 KESSPKLVELLLNSGSREQDV 771
>sp|Q9HYL3|NOSR_PSEAE Regulatory protein NosR OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=nosR PE=4
SV=1
Length = 715
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Query: 64 RPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVN 116
RPC L EC + G + ++ +YC +C D+D CP +VN
Sbjct: 648 RPCQLC--ARECEIQAIHPD----GRIEANECHYCLDCQMTYHDQDKCPPLVN 694
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 29/102 (28%)
Query: 33 SSLLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGI 92
+ LLC P ++ R+C+ DG+C +P + R CD C
Sbjct: 1921 TCLLCDCYPTGSLSRVCDPEDGQCP-----CKPGVIGRQCDRC----------------- 1958
Query: 93 SDAYYCKECTQQ-EKDRDGCPKIVNLGSAKTDLFYERKKYGF 133
D + + T E + D CP+ + G +++ R ++G
Sbjct: 1959 -DNPFAEVTTNGCEVNYDSCPRAIEAG-----IWWPRTRFGL 1994
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 29/102 (28%)
Query: 33 SSLLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGI 92
+ LLC P ++ R+C+ DG+C +P + R CD C
Sbjct: 1920 TCLLCDCYPTGSLSRVCDPEDGQCP-----CKPGVIGRQCDRC----------------- 1957
Query: 93 SDAYYCKECTQQ-EKDRDGCPKIVNLGSAKTDLFYERKKYGF 133
D + + T E + D CP+ + G +++ R ++G
Sbjct: 1958 -DNPFAEVTTNGCEVNYDSCPRAIEAG-----IWWPRTRFGL 1993
>sp|Q5AML2|CTU1_CANAL Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=NCS6 PE=3 SV=1
Length = 395
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 32 TSSLLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQ 81
T++++ I + LCE C G+ + RP L+++C EC Y F+
Sbjct: 5 TNTIINSSVKKIKLSALCELCHGRKAVMK---RPKNLMKLCKECFYNIFE 51
>sp|P0C9H9|1106L_ASFM2 Protein MGF 110-6L OS=African swine fever virus (isolate
Tick/Malawi/Lil 20-1/1983) GN=Mal-011 PE=3 SV=1
Length = 118
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 46 GRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQG 82
G K DG + + YVRPC++ R D+C Y +G
Sbjct: 54 GNCINKIDGSVIYKNEYVRPCSVSRSMDKCMYDLNKG 90
>sp|Q9QYP2|CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus
norvegicus GN=Celsr2 PE=2 SV=1
Length = 2144
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 33 SSLLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECN 76
+ LLC P ++ R+C+ DG+C +P + R CD C+
Sbjct: 1145 TCLLCDCYPTGSLSRVCDPEDGQCP-----CKPGVIGRQCDRCD 1183
>sp|O74759|NTO1_SCHPO Mst2 complex subunit nto1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nto1 PE=1 SV=1
Length = 767
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 41 PGIAIGRLCEKCDGKCVICDSYV-RPCTLVRVCDECNYGSFQGRCVICGGVGI--SDAYY 97
P I R+ ++ DG+CVIC+ + CD CN Q C G+ ++
Sbjct: 182 PKIEPVRVEDELDGRCVICNEAECENSNAIVFCDNCNTSVHQN----CYGIPFVPEGQWF 237
Query: 98 CKEC 101
CK+C
Sbjct: 238 CKKC 241
>sp|Q6FMB5|CTU1_CANGA Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=NCS6 PE=3 SV=1
Length = 358
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 39 KQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQ 81
KQ + + +LCE C G+ + RP L ++C EC Y F+
Sbjct: 12 KQEVVKLSQLCELCHGRKAVLR---RPKNLQKICKECFYYVFE 51
>sp|B5RV24|CTU1_DEBHA Cytoplasmic tRNA 2-thiolation protein 1 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=NCS6 PE=3 SV=1
Length = 377
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 43 IAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQ 81
I + LCE C+G+ + RP L ++C EC Y F+
Sbjct: 11 IKLSALCELCNGRKAVMK---RPKNLQKLCKECFYNVFE 46
>sp|O28552|DP2L_ARCFU DNA polymerase II large subunit OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=polC PE=3 SV=1
Length = 1143
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 69 VRVCDECNYGSFQGRCVICGGVGISDAYYCKEC 101
+R C +C +F +C +CG + YYC C
Sbjct: 648 IRKCPQCGKETFWLKCDVCGEL-TEQLYYCPSC 679
>sp|Q6CWX6|CTU1_KLULA Cytoplasmic tRNA 2-thiolation protein 1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=NCS6 PE=3 SV=1
Length = 371
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 30 IWTSSLLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQ 81
++T +K + + +LCE C + + RP L R+C EC + F+
Sbjct: 1 MFTPPTDPKKSVKVKVSQLCELCHARKAVMK---RPKNLQRICKECFFSVFE 49
>sp|P0C9H8|1106L_ASFK5 Protein MGF 110-6L OS=African swine fever virus (isolate
Pig/Kenya/KEN-50/1950) GN=Ken-013 PE=3 SV=1
Length = 122
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 46 GRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQG 82
G K DG + + +VRPC++ R D+C Y +G
Sbjct: 58 GNCINKIDGSVIYKNEFVRPCSVSRWMDKCMYDLNKG 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.463
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,315,994
Number of Sequences: 539616
Number of extensions: 1956640
Number of successful extensions: 5516
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 5471
Number of HSP's gapped (non-prelim): 78
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)