Citrus Sinensis ID: 037283


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
MLFSTYYKTLSLLIRSNLNIFFSKQADVSIWTSSLLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR
ccHHHHHHHHHHcHHcccccccHHHHHHHcccccEEcccccccHHHHHcccccccCCcccccccccCEEEEccccccccccccEEEcccccccccEEEHHHHHHcccccccccEEEcccccHHHHHHHHHcccccc
**FSTYYKTLSLLIRSNLNIFFSKQADVSIWTSSLLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKK******
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MLFSTYYKTLSLLIRSNLNIFFSKQADVSIWTSSLLCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
PHD finger-like domain-containing protein 5A Acts as a transcriptional regulator by binding to the GJA1/Cx43 promoter and enhancing its up-regulation by ESR1/ER-alpha. Also involved in pre-mRNA splicing.confidentP83870
PHD finger-like domain-containing protein 5A Acts as a transcriptional regulator by binding to the GJA1/Cx43 promoter and enhancing its up-regulation by ESR1/ER-alpha. Also involved in pre-mRNA splicing.confidentP83871
PHD finger-like domain-containing protein 5A confidentP0DI19

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2K0A, chain A
Confidence level:very confident
Coverage over the Query: 28-131
View the alignment between query and template
View the model in PyMOL