BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037287
MDLFLKRMNEDAAECSFNDGDILKCPFLRNINKPTSFSFSSVNFPLPERGAKGPIFEDGP
NFGMAFKLFHGKDGVVPLSGRSYSHNDNEPEPISQFNPLGTKVATISLSAFSPGGPFSFG
PFNDKWKKQQKKSEIPNNREPSSQNQNSSKHEASGNDWLETGNCPIAKSYRAVSGVLPIV
AKAFQPPPGLKLRCPPAPLPAKMLVIALMGMAVNVPLGVWKEHTRKFSLSWFAAVHAAVP
FIAMLRKSVVMPKEAMALTIGASILGQVIGSRAERQRLKAVAEREGVATQTDIAATVTGY
SPSQVNGSHCGTEGKSWDSLSVEPGRSTSSSANVCF

High Scoring Gene Products

Symbol, full name Information P value
AT5G45410 protein from Arabidopsis thaliana 3.6e-73
AT4G25030 protein from Arabidopsis thaliana 4.8e-62
GSU0639
Uncharacterized protein
protein from Geobacter sulfurreducens PCA 1.5e-07
GSU_0639
hypothetical protein
protein from Geobacter sulfurreducens PCA 1.5e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037287
        (336 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2163563 - symbol:AT5G45410 "AT5G45410" species...   739  3.6e-73   1
TAIR|locus:2117293 - symbol:AT4G25030 "AT4G25030" species...   634  4.8e-62   1
UNIPROTKB|Q74FH0 - symbol:GSU0639 "Uncharacterized protei...   126  1.5e-07   1
TIGR_CMR|GSU_0639 - symbol:GSU_0639 "hypothetical protein...   126  1.5e-07   1


>TAIR|locus:2163563 [details] [associations]
            symbol:AT5G45410 "AT5G45410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
            pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
            signaling pathway" evidence=RCA] [GO:0010363 "regulation of
            plant-type hypersensitive response" evidence=RCA] EMBL:CP002688
            EMBL:AB018113 EMBL:BT002755 EMBL:AK317328 IPI:IPI00528181
            RefSeq:NP_001078717.1 RefSeq:NP_199354.3 RefSeq:NP_680396.1
            UniGene:At.22622 EnsemblPlants:AT5G45410.1
            EnsemblPlants:AT5G45410.2 EnsemblPlants:AT5G45410.3 GeneID:834577
            KEGG:ath:AT5G45410 TAIR:At5g45410 InParanoid:Q9FHJ5 OMA:GESAKST
            PhylomeDB:Q9FHJ5 ProtClustDB:CLSN2917856 Genevestigator:Q9FHJ5
            Uniprot:Q9FHJ5
        Length = 342

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 173/336 (51%), Positives = 208/336 (61%)

Query:    22 ILKCPFLRNINKPTSFSFSSVNFPLPERGAKGPIFEDGPNFGMAFKLFHGKDGVVPLSGR 81
             I KCPFLRNINKPT+ SFSS++FP+P +G KGPIFEDGP F  AFKLFHGKDG+VPLSG 
Sbjct:    13 IQKCPFLRNINKPTNLSFSSLSFPIPVQGGKGPIFEDGPGFDSAFKLFHGKDGIVPLSGF 72

Query:    82 SYSHNDNEPEPISQFNPLGTKVATISLXXXXXXXXXXXXXXNDKWKKQQKKSEIPNNREP 141
             +    D       QFNPL  KVATISL              ++KWKKQQKK +   N++ 
Sbjct:    73 ADDSEDEAGRRALQFNPLAGKVATISLSAFGPGGPFGFGPFSEKWKKQQKKPKPSKNQQS 132

Query:   142 SSQNQNSSKHEA---SGNDWLETGNCPIAKSYRAVSGVL------------PIVA-KAFQ 185
                +++ +  +    +GN  +       +K    +S  L            PIVA +A  
Sbjct:   133 GDSSKHEAVGDEWLKTGNCPIAKSFRAASKVMPLISKALTLPPGMKYRCPAPIVAARAAL 192

Query:   186 PPPGLKLRCPPAPLPAKMLVIALMGMAVNVPLGVWKEHTRKFSLSWFAAVHAAVPFIAML 245
                 L     P PLP KML IALMGMA NVPLGVW+EHT+KFS +WF AVHAAVPFIAML
Sbjct:   193 SKTALVKSLRPQPLPEKMLAIALMGMAANVPLGVWREHTKKFSPAWFLAVHAAVPFIAML 252

Query:   246 RKSVVMPKEAMALTIGASILGQVIGSRAERQRLKAVAEREGVATQTDIAATVTGY--SP- 302
             RKSV+MPK AMALTIGASILGQVIGSRAER RLKAVAE+        + A V+GY  SP 
Sbjct:   253 RKSVLMPKTAMALTIGASILGQVIGSRAERYRLKAVAEK-----MVPVTAMVSGYNQSPG 307

Query:   303 -SQVNGSHCGT-EGKSWDSLSVEPGRSTSSSANVCF 336
              S ++G HCG  EG      +V  G S  S+  +C+
Sbjct:   308 DSGISGGHCGIGEGVKQVYYNVNIGESAKSTG-LCY 342


>TAIR|locus:2117293 [details] [associations]
            symbol:AT4G25030 "AT4G25030" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
            [GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
            "response to water deprivation" evidence=RCA] [GO:0009611 "response
            to wounding" evidence=RCA] [GO:0009723 "response to ethylene
            stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
            evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
            stimulus" evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
            protein response" evidence=RCA] [GO:0035556 "intracellular signal
            transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
            response" evidence=RCA] [GO:0043069 "negative regulation of
            programmed cell death" evidence=RCA] EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161562 EMBL:AL035523 EMBL:AY085639
            EMBL:BT024736 EMBL:AK228468 EMBL:AK317301 IPI:IPI00530773
            PIR:T05524 RefSeq:NP_194233.1 RefSeq:NP_974613.1 UniGene:At.22641
            STRING:Q9SW23 EnsemblPlants:AT4G25030.1 EnsemblPlants:AT4G25030.2
            GeneID:828606 KEGG:ath:AT4G25030 TAIR:At4g25030 eggNOG:NOG312033
            HOGENOM:HOG000005975 InParanoid:Q9SW23 OMA:NNHEALS PhylomeDB:Q9SW23
            ProtClustDB:CLSN2915960 ArrayExpress:Q9SW23 Genevestigator:Q9SW23
            Uniprot:Q9SW23
        Length = 344

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 151/332 (45%), Positives = 204/332 (61%)

Query:    21 DILKCPFLRNINKPTSFSFSS-VNFPLPERGAKGPIFEDGPNFGMAFKLFHGKDGVVPLS 79
             +IL+CPFLRNIN+PT+ SFSS + FP+P R  KGPIFEDGPNF  AF+LFHG+DGVVPLS
Sbjct:    15 NILRCPFLRNINEPTNLSFSSSLPFPIPARAGKGPIFEDGPNFDTAFRLFHGQDGVVPLS 74

Query:    80 GRSYSHNDNEPEPISQFNPLGTKVATISLXXXXXXXXXXXXXXNDKWKKQQKKSEIPNNR 139
               + +    +P P+  F+PL  K ATISL              +D +K Q+KKS+   N+
Sbjct:    75 DTARTEAQ-KPVPV--FHPLAAKAATISLSSFGSGGPFGFDAFSDMFKNQKKKSDSSKNK 131

Query:   140 EPSSQNQNSSKHEASGNDWLE------TGNCP-IAKSYRAVSGV---LP---IVAKAF-- 184
               + +       + +GN  +       +G  P +AK  +   G+    P   + A+A   
Sbjct:   132 GGNHEAMGDEWLK-TGNCPIAKSYRAVSGVAPLVAKILQPPPGMKFKCPQAIVTARAAIS 190

Query:   185 QPPPGLKLRCPPAPLPAKMLVIALMGMAVNVPLGVWKEHTRKFSLSWFAAVHAAVPFIAM 244
             + P    LR  P PLPAK+LVI ++GMA+NVPLGVW+EHT KFS SWF A+HAAVPFI +
Sbjct:   191 KTPFAKNLR--PQPLPAKVLVIGMLGMALNVPLGVWREHTEKFSASWFIALHAAVPFIGI 248

Query:   245 LRKSVVMPKEAMALTIGASILGQVIGSRAERQRLKAVAERE---GVATQTDIAATVTGYS 301
             LRKSV+MPK AM  TI AS+LGQVIGSRAER+RLK+VAE++    V   + + A    ++
Sbjct:   249 LRKSVLMPKTAMVFTIAASVLGQVIGSRAERRRLKSVAEKKLTLEVPNPSSVEADQMQFA 308

Query:   302 PSQVNGSHCGTEG-KSWDSLSVEPGRSTSSSA 332
                 +G  CG +    W+ + ++     SS A
Sbjct:   309 GVSSDG-RCGDKVVMKWNPMMLDVASPVSSGA 339


>UNIPROTKB|Q74FH0 [details] [associations]
            symbol:GSU0639 "Uncharacterized protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:AE017180
            GenomeReviews:AE017180_GR RefSeq:NP_951696.1 GeneID:2685206
            KEGG:gsu:GSU0639 PATRIC:22024027 HOGENOM:HOG000276097 OMA:YVHISIP
            ProtClustDB:CLSK827967 BioCyc:GSUL243231:GH27-641-MONOMER
            Uniprot:Q74FH0
        Length = 85

 Score = 126 (49.4 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 22/72 (30%), Positives = 40/72 (55%)

Query:   206 IALMGMAVNVPLGVWKEHTRKFSLSWFAAVHAAVPFIAMLRKSVVMPKEAMALTIGASIL 265
             + L  + +N+PLG  ++   KF+  W+  +H ++P I  LR       + + LT+G ++ 
Sbjct:    10 LTLTALLINIPLGYLRQGCEKFTFGWYFYIHISIPLIIYLRVKAGFSWKFIPLTLGGAVA 69

Query:   266 GQVIGSRAERQR 277
             GQ+IG    R+R
Sbjct:    70 GQLIGGFIHRRR 81


>TIGR_CMR|GSU_0639 [details] [associations]
            symbol:GSU_0639 "hypothetical protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:AE017180
            GenomeReviews:AE017180_GR RefSeq:NP_951696.1 GeneID:2685206
            KEGG:gsu:GSU0639 PATRIC:22024027 HOGENOM:HOG000276097 OMA:YVHISIP
            ProtClustDB:CLSK827967 BioCyc:GSUL243231:GH27-641-MONOMER
            Uniprot:Q74FH0
        Length = 85

 Score = 126 (49.4 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 22/72 (30%), Positives = 40/72 (55%)

Query:   206 IALMGMAVNVPLGVWKEHTRKFSLSWFAAVHAAVPFIAMLRKSVVMPKEAMALTIGASIL 265
             + L  + +N+PLG  ++   KF+  W+  +H ++P I  LR       + + LT+G ++ 
Sbjct:    10 LTLTALLINIPLGYLRQGCEKFTFGWYFYIHISIPLIIYLRVKAGFSWKFIPLTLGGAVA 69

Query:   266 GQVIGSRAERQR 277
             GQ+IG    R+R
Sbjct:    70 GQLIGGFIHRRR 81


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      336       322   0.00085  116 3  11 22  0.43    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  231 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.85u 0.10s 28.95t   Elapsed:  00:00:02
  Total cpu time:  28.85u 0.10s 28.95t   Elapsed:  00:00:02
  Start:  Sat May 11 07:25:57 2013   End:  Sat May 11 07:25:59 2013

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