BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037288
(513 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58DC2|DCAF4_BOVIN DDB1- and CUL4-associated factor 4 OS=Bos taurus GN=DCAF4 PE=2 SV=1
Length = 494
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 185/469 (39%), Gaps = 99/469 (21%)
Query: 4 ELPGFYYDAEKNRYFPIKGPIPGTSR----SSSTAAQKPISKQPTRATNS--------SL 51
+LPG+Y+D EK RYF + +PG + + + QK + ++ R +
Sbjct: 63 DLPGYYFDPEKKRYFRL---LPGHNNCNPLTKESIRQKEMERKRLRLLEEEEQQGKKIAR 119
Query: 52 TGATTSKLLQARELRGNVFSLSKGKCNFKEEFQKRLISQPVVWRYEATNQTGDITLEQIE 111
G S LLQ +L F + C E Q + + V + ++++ + + +
Sbjct: 120 LGFNASSLLQKSKLG---FLNATSYCRLAHELQVSCMQRKKV-QIQSSDPSALASDQFNL 175
Query: 112 LNVQTPEGQFRT--DVLLTGSVNGFFSL--FEVGNVGQHAHDTVKFIPSCVWPRIKDNKT 167
+ T + T DV + GS G SL + H H+ + F N+
Sbjct: 176 IMADTNSDRLFTVNDVKVGGSKYGIISLHGLKTPTFRVHMHENLYFT----------NRK 225
Query: 168 ESSKAPEHIWRLNKASILMPSSVSCIKLFGKHPSCATDGGSVRHALITSLGSETTGGSIY 227
++ + L+ +L C+ + P CAT L TSL
Sbjct: 226 VNAMCWASLNHLDSHVLL------CLMGIAETPGCAT-------LLPTSLFVSNHAAG-- 270
Query: 228 ALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETG 287
D P + + + ++ C W+ + N + G + + + TG
Sbjct: 271 ----DRPGML---------CSFRIPGAWSC-AWSLNIQANNCFST-GLSRRVLVTSVVTG 315
Query: 288 MASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRL 347
S SD+L QQ + ++ G R+G I +D+R + +G
Sbjct: 316 HRQSFGTS-SDVLTQQFAVTAPLLFNGCRSGEIFAIDLRCQNQG---------------- 358
Query: 348 QRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLT 407
W + F S+++ +Q LQ +Q +AS M GT+KL+D R T
Sbjct: 359 ----------------KGWKATCLFHDSAVTSVQILQ-EEQCLMASDMAGTIKLWDLRTT 401
Query: 408 TRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELV 456
++ YEGHVN + + L V + E +++ G+DC RIWS+ G+L+
Sbjct: 402 K--CIRQYEGHVNEYAHLPLHVHEEEGIMVAVGQDCYTRIWSLHDGQLL 448
>sp|Q3SXM0|DC4L1_HUMAN DDB1- and CUL4-associated factor 4-like protein 1 OS=Homo sapiens
GN=DCAF4L1 PE=2 SV=1
Length = 396
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 35/162 (21%)
Query: 295 SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVT 354
+ SD+LAQQ + ++ G R+G I +D+R R RG RA R
Sbjct: 223 TSSDVLAQQFASTAPLLFNGCRSGEIFAIDLRCRNRGKGWRATR---------------- 266
Query: 355 NEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQS 414
F S+++ +Q LQ +Q +AS M G +KL+D R T V+
Sbjct: 267 ----------------LFHDSAVTSVQILQ-EEQCLMASDMTGKIKLWDLRATK--CVRQ 307
Query: 415 YEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELV 456
YEGHVN + L V + E V++ G+DC RIWS+ L+
Sbjct: 308 YEGHVNESAYLPLHVHEEEGIVVAVGQDCYTRIWSLHDAHLL 349
>sp|Q8WV16|DCAF4_HUMAN DDB1- and CUL4-associated factor 4 OS=Homo sapiens GN=DCAF4 PE=1
SV=3
Length = 495
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 35/162 (21%)
Query: 295 SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVT 354
+ SD+LAQQ ++ G R+G I +D+R +G
Sbjct: 323 TNSDVLAQQFALMAPLLFNGCRSGEIFAIDLRCGNQG----------------------- 359
Query: 355 NEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQS 414
W + F S+++ ++ LQ +QY +AS M G +KL+D R T V+
Sbjct: 360 ---------KGWKATRLFHDSAVTSVRILQ-DEQYLMASDMAGKIKLWDLRTTK--CVRQ 407
Query: 415 YEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELV 456
YEGHVN + + L V + E +++ G+DC RIWS+ L+
Sbjct: 408 YEGHVNEYAYLPLHVHEEEGILVAVGQDCYTRIWSLHDARLL 449
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 9/42 (21%)
Query: 4 ELPGFYYDAEKNRYFPIKGPIPGTSRSSSTAAQKPISKQPTR 45
ELPGFY+D EK RYF + +PG + + P++K+ R
Sbjct: 65 ELPGFYFDPEKKRYFRL---LPGHNNCN------PLTKESIR 97
>sp|Q8NA75|DC4L2_HUMAN DDB1- and CUL4-associated factor 4-like protein 2 OS=Homo sapiens
GN=DCAF4L2 PE=1 SV=1
Length = 395
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 35/162 (21%)
Query: 295 SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVT 354
+ SD+LAQQ ++ G R+G I +D+R +G +A
Sbjct: 223 TSSDVLAQQFAIMTPLLFNGCRSGEIFGIDLRCGNQGSGWKA------------------ 264
Query: 355 NEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQS 414
I SH S+++ LQ LQ Q+ ++S M GT+KL+D R T V
Sbjct: 265 ----------ICLSHD----SAVTSLQILQ-DGQFLVSSDMTGTIKLWDLRATK--CVTQ 307
Query: 415 YEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELV 456
YEGHVN+ + + V++ E V + G+DC RIWS+R G L+
Sbjct: 308 YEGHVNNSAYLPVHVNEEEGVVAAVGQDCYTRIWSLRHGHLL 349
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE-RFVMSGGEDCKLR 446
+Y LAS++D T+KL+D + ++ Y GH NS I + ++++SG EDCK+
Sbjct: 269 KYILASNLDSTLKLWD--FSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 447 IWSIRSGELV 456
IW++++ E+V
Sbjct: 327 IWNLQTREIV 336
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 386 YDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKL 445
+ ++F + S+D +K++D R +G + +Y+GH ++ D R+V+SGGED +
Sbjct: 112 FGEFFASGSLDTNLKIWDIR--KKGCIHTYKGHTRGVNVLRFTPDG--RWVVSGGEDNIV 167
Query: 446 RIWSIRSGELVFEDK 460
++W + +G+L+ E K
Sbjct: 168 KVWDLTAGKLLTEFK 182
>sp|Q09392|YR49_CAEEL Uncharacterized WD repeat-containing protein F47D12.9
OS=Caenorhabditis elegans GN=F47D12.9 PE=2 SV=1
Length = 545
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 46/225 (20%)
Query: 256 KCTVWTADFCTNPSQAVIGTNLGAA--MVDMETGMASWVCRSKSDILAQQVIHSGNVVLC 313
K +W+ + N Q IG L + + ++ T + + K ++L GN+V
Sbjct: 334 KGNIWSVGW--NAPQMSIGFGLESCFRVENLLTDRSFLMSSRKRNVLNHCFSADGNLVYM 391
Query: 314 GFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFM 373
G RN ++ D+R + D +T + L +TTF
Sbjct: 392 GLRNDNVIKSDLRMNR---------------------DHITGQ----LNG---ACNTTF- 422
Query: 374 PSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE 433
+ L+ + + + D ++++D R + + GH N+ R+ + D+ E
Sbjct: 423 ---VRVLEKTR--PECVVTEGFDSIIRIWDFRWP-KNPMMEMHGHSNNCNRLNVFFDKEE 476
Query: 434 RFVMSGGEDCKLRIWSIRSGELVFEDKFSNS----VPSAV---CW 471
RFV + G D +R WS+ SG+++ K N P AV CW
Sbjct: 477 RFVFAAGSDGYVRGWSLTSGDMLCSVKTPNHSNPIFPRAVYSDCW 521
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE-RFVMSGGEDCKLR 446
+Y L+S++D T+KL+D ++ Y+GH N+ I + ++++SG EDCK+
Sbjct: 261 KYILSSNLDNTLKLWD--FGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIY 318
Query: 447 IWSIRSGELV 456
+W++++ E+V
Sbjct: 319 VWNLQTKEVV 328
>sp|Q17QU5|LST8_BOVIN Target of rapamycin complex subunit LST8 OS=Bos taurus GN=MLST8
PE=2 SV=1
Length = 326
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 359 FELKANIWPSHTTFMPSSI----SCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQ 413
++ W +H+ ++ S + +L++ D+ +A++ +++YD +
Sbjct: 20 YDHTVRFWQAHSGICTRTVQHQDSQVNALEITPDRTMIAAAGYQHIRMYDLNSNNPNPII 79
Query: 414 SYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAVCWR 472
SY+G VN + +G + R++ +GGEDC RIW +RS L + F + P + VC
Sbjct: 80 SYDG-VNKNVA-SVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLH 137
Query: 473 TQRS---MGPQIEGKIHEEFDLGQRHS 496
++ +G Q G IH +DL H+
Sbjct: 138 PNQAELIVGDQ-SGAIH-IWDLKTDHN 162
>sp|A2R3Z3|MDV1_ASPNC Mitochondrial division protein 1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=mdv1 PE=3 SV=2
Length = 657
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 358 WFELKANIWPSHTTFMPS------SISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGA 411
W +A+ S TT+ PS S + ++Q +D + DG V+L+D R G
Sbjct: 478 WAAAQASTLGSETTWRPSGRLPDASADFVGAVQCFDAALACGTADGMVRLWDLR---SGQ 534
Query: 412 V-QSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAV 469
V +S GH T +Q + +++G +D +RIW +R+G + D ++ P +++
Sbjct: 535 VHRSLVGHTGPITCLQF----DDVHLVTGSQDRSIRIWDLRTGSIF--DAYAYDKPITSM 588
Query: 470 CWRTQRSMGPQIEGKIHEEFDLGQRHSWEAWIG 502
+ T+R + E + + +D H W+ G
Sbjct: 589 MFDTKRIVAAAGENVV-KVYDKADGHHWDCGAG 620
>sp|Q3KQ62|WDR83_XENLA WD repeat domain-containing protein 83 OS=Xenopus laevis GN=wdr83
PE=2 SV=1
Length = 314
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 316 RNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPS 375
R AI +D K G SS H I + N R + + E+ A+ ++ S
Sbjct: 142 RPDAIQIMDEAKD--GISSVKVSAHEILAGSVDGNLRRYDLRKGEMCAD-------YLGS 192
Query: 376 SISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERF 435
I+C+ S Q LASS+D T++L D T + Y GH N ++ + + +
Sbjct: 193 PITCV-SFSQDSQCLLASSLDSTLRLLDK--DTGELLGEYTGHQNLSYKLDSCLSEKDTH 249
Query: 436 VMSGGEDCKLRIWSIRSGELVFEDKFSNSV-------PSAVCWRTQRSMGPQI-EGKIHE 487
V+S ED + W + G LV + +V P+ C T G Q+ G +E
Sbjct: 250 VLSCSEDGTVCFWDLVEGSLVLKLPVGKAVVQSLSFHPTECCLLTASEGGVQVWRGASYE 309
Query: 488 E 488
E
Sbjct: 310 E 310
>sp|Q9BVC4|LST8_HUMAN Target of rapamycin complex subunit LST8 OS=Homo sapiens GN=MLST8
PE=1 SV=1
Length = 326
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 359 FELKANIWPSHTTFMPSSI----SCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQ 413
++ W +H+ ++ S + +L++ D+ +A++ +++YD +
Sbjct: 20 YDHTVRFWQAHSGICTRTVQHQDSQVNALEVTPDRSMIAAAGYQHIRMYDLNSNNPNPII 79
Query: 414 SYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAVCWR 472
SY+G VN + +G + R++ +GGEDC RIW +RS L + F + P + VC
Sbjct: 80 SYDG-VNKNIA-SVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLH 137
Query: 473 TQRS---MGPQIEGKIHEEFDLGQRHS 496
++ +G Q G IH +DL H+
Sbjct: 138 PNQAELIVGDQ-SGAIH-IWDLKTDHN 162
>sp|Q5XGI5|WDR83_XENTR WD repeat domain-containing protein 83 OS=Xenopus tropicalis
GN=wdr83 PE=2 SV=1
Length = 314
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 29/205 (14%)
Query: 303 QVIHSGNVVLCGFRNGAIVTVDVRKR-----------QRGCSSRAGRRHRIPYSRLQRND 351
Q V++ G + +I D R R + G SS H I + N
Sbjct: 116 QFNEEATVIMSGSIDSSIRCWDCRSRRPEAIQILDEAKDGISSIKISDHEILAGSVDGNL 175
Query: 352 RVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGA 411
R + + E+ A+ ++ S I+C+ S Q LASS+D T++L D T
Sbjct: 176 RRYDLRKGEMCAD-------YLGSPITCV-SFSQDSQCLLASSLDSTLRLLDK--DTGEL 225
Query: 412 VQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSV------ 465
+ Y GH N ++ + + + V+S ED + W + G LV + +
Sbjct: 226 LGEYTGHQNHSYKLDSCLSEKDTHVLSCSEDGTVCFWDLVEGSLVLKLPVGKAAVQSLSF 285
Query: 466 -PSAVCWRTQRSMGPQI-EGKIHEE 488
PS C T G Q+ G +EE
Sbjct: 286 HPSECCLLTASEGGVQLWRGASYEE 310
>sp|Q9DCJ1|LST8_MOUSE Target of rapamycin complex subunit LST8 OS=Mus musculus GN=Mlst8
PE=1 SV=1
Length = 326
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 359 FELKANIWPSHTTFMPSSI----SCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQ 413
++ W +H+ ++ S + +L++ D+ +A++ +++YD +
Sbjct: 20 YDHTVRFWQAHSGICTRTVQHQDSQVNALEITPDRSMIAAAGYQHIRMYDLNSNNPNPII 79
Query: 414 SYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAVCWR 472
SY+G S +G + R++ +GGEDC RIW +RS L + F + P + VC
Sbjct: 80 SYDG--VSKNIASVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVCLH 137
Query: 473 TQRS---MGPQIEGKIHEEFDLGQRHS 496
++ +G Q G IH +DL H+
Sbjct: 138 PNQAELIVGDQ-SGAIH-IWDLKTDHN 162
>sp|Q803V5|LST8_DANRE Target of rapamycin complex subunit lst8 OS=Danio rerio GN=mlst8
PE=2 SV=1
Length = 326
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 359 FELKANIWPSHTTFMPSSI----SCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQ 413
++ W +H+ ++ S + SL++ D+ +A++ +++YD V
Sbjct: 20 YDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAAGYQHIRMYDLNSNNPNPVI 79
Query: 414 SYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAVCWR 472
+Y+G + T + G + R++ +GGEDC RIW +RS L + F + P + VC
Sbjct: 80 NYDGVSKNITSV--GFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVCLH 137
Query: 473 TQRS---MGPQIEGKIHEEFDLGQRHS 496
++ +G Q G IH +DL H+
Sbjct: 138 PNQAELIVGDQ-SGVIH-IWDLKTDHN 162
>sp|P41318|LST8_YEAST Target of rapamycin complex subunit LST8 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LST8 PE=1
SV=1
Length = 303
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446
D+ LA++ V+LYD R T V S+EGH + T + Q R++++ ED ++
Sbjct: 43 DKKLLATAGHQNVRLYDIRTTNPNPVASFEGHRGNVTSVSF--QQDNRWMVTSSEDGTIK 100
Query: 447 IWSIRS 452
+W +RS
Sbjct: 101 VWDVRS 106
>sp|P0CS32|EIF3I_CRYNJ Eukaryotic translation initiation factor 3 subunit I
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=TIF34 PE=3 SV=1
Length = 341
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 404 HRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSN 463
RL T G ++ +GH S + VD RF+++GG D +++W +++GE ++ +F
Sbjct: 43 ERLGTYGGIKGGDGHNGSVWTV--AVDSQTRFLLTGGADNAMKLWEVKTGECLYTWEFLT 100
Query: 464 SVPSAVCWRTQRSM 477
+V V W M
Sbjct: 101 AV-KRVAWNEDDDM 113
>sp|P0CS33|EIF3I_CRYNB Eukaryotic translation initiation factor 3 subunit I
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=TIF34 PE=3 SV=1
Length = 341
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 404 HRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSN 463
RL T G ++ +GH S + VD RF+++GG D +++W +++GE ++ +F
Sbjct: 43 ERLGTYGGIKGGDGHNGSVWTV--AVDSQTRFLLTGGADNAMKLWEVKTGECLYTWEFLT 100
Query: 464 SVPSAVCWRTQRSM 477
+V V W M
Sbjct: 101 AV-KRVAWNEDDDM 113
>sp|Q9Z2K5|LST8_RAT Target of rapamycin complex subunit LST8 OS=Rattus norvegicus
GN=Mlst8 PE=1 SV=2
Length = 326
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 359 FELKANIWPSHTTFMPSSI----SCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQ 413
++ W +H+ ++ S + +L++ D+ +A++ +++YD +
Sbjct: 20 YDHTVRFWQAHSGICTRTVQHQDSQVNALEITPDRSMIAATGYQHIRMYDLNSNNPNPII 79
Query: 414 SYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAVC 470
SY+G S +G + R++ +GGEDC RIW +RS L + F + P + VC
Sbjct: 80 SYDG--VSKNIASVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAPINCVC 135
>sp|Q5I0B4|LST8_XENTR Target of rapamycin complex subunit lst8 OS=Xenopus tropicalis
GN=mlst8 PE=2 SV=1
Length = 326
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 359 FELKANIWPSHTTFMPSSI----SCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQ 413
++ W +H+ ++ S + SL++ D+ +A++ +++YD V
Sbjct: 20 YDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAAGYQHIRMYDLNSNNPNPVI 79
Query: 414 SYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP 466
+Y+G + T + G + R++ +GGEDC RIW +RS L + F + P
Sbjct: 80 NYDGVSKNITSV--GFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAP 130
>sp|Q6PA72|LST8_XENLA Target of rapamycin complex subunit lst8 OS=Xenopus laevis GN=mlst8
PE=2 SV=1
Length = 326
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 359 FELKANIWPSHTTFMPSSI----SCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQ 413
++ W +H+ ++ S + SL++ D+ +A++ +++YD V
Sbjct: 20 YDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAAGYQHIRMYDLNSNNPNPVI 79
Query: 414 SYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP 466
+Y+G + T + G + R++ +GGEDC RIW +RS L + F + P
Sbjct: 80 NYDGVSKNITSV--GFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAP 130
>sp|A7TNS8|CAF4_VANPO CCR4-associated factor 4 homolog OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=CAF4 PE=3 SV=1
Length = 669
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 375 SSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSER 434
++I+CL + + + A +D T+K++D L++ + S+ H+++ +QL D ++
Sbjct: 354 NNITCLDFDEPFGTLYSAGQLDNTIKVWD--LSSSKFIGSFNAHLSTINCMQL--DTQQQ 409
Query: 435 FVMSGGEDCKLRIWSIRSGELVFEDKFSN 463
++SGG D +R+W I+ F+D +N
Sbjct: 410 IIISGGRDSLVRLWDIKK----FQDYSTN 434
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 372 FMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQ 431
F S + SLQ ++ + + DG ++L+D R + ++ EGH ++ T ++ +
Sbjct: 515 FAHSEAPTIGSLQCFESALASGTKDGLIRLWDLR--SGKVIRILEGHTDAITSLKFDMTN 572
Query: 432 SERFVMSGGEDCKLRIWSIRSGELV 456
+++G D +RIW +R+ LV
Sbjct: 573 ----LITGSLDKNIRIWDMRNWSLV 593
>sp|Q4V8C4|WDR5B_RAT WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2
SV=1
Length = 328
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRG-AVQSYEGHVNSHTRIQLGVDQSER-FVMSGGEDCKL 445
+Y L +++D T+KL+D+ +RG +++Y GH N I + R +V+SG ED +
Sbjct: 221 KYILTATLDSTLKLWDY---SRGRCLKTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMV 277
Query: 446 RIWSIRSGELVFE-DKFSNSVPSAVCWRTQ 474
IW++++ E+V ++ V SA C T+
Sbjct: 278 YIWNLQTKEIVQRLQGHTDVVISAACHPTE 307
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 369 HTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLG 428
HT+F+ S + QL S DGTVKL+D R + AVQ+++ N++ + +
Sbjct: 151 HTSFVNSCYPARRGPQL----VCTGSDDGTVKLWDIR--KKAAVQTFQ---NTYQVLAVT 201
Query: 429 VDQSERFVMSGGEDCKLRIWSIRSGELVF 457
+ + ++SGG D +++W +R +L +
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 34/176 (19%)
Query: 306 HSGNVVLCGF--RNGAIVTVDVRKRQRGCSSRAGR------RHRIPYS--RLQRNDRVTN 355
HS V C F ++ IV+ + R R G+ H P S R+ +
Sbjct: 155 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 214
Query: 356 EQWFELKANIWPSHTTFMPSSISCLQSLQLYD-------------QYFLASSMDGTVKLY 402
++ IW + +S CL++L D +Y LA+++D T+KL+
Sbjct: 215 SSSYDGLCRIWDT------ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 268
Query: 403 DHRLTTRG-AVQSYEGHVNSHTRIQLGVDQSE-RFVMSGGEDCKLRIWSIRSGELV 456
D+ ++G +++Y GH N I + ++++SG ED + IW+++S E+V
Sbjct: 269 DY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVV 321
>sp|Q758R7|MDV1_ASHGO Mitochondrial division protein 1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MDV1
PE=3 SV=1
Length = 715
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 382 SLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE 441
++Q YD + DG V+L+D L + V++ EGH ++ T +Q +++G
Sbjct: 572 AIQCYDAALATGTKDGIVRLWD--LRSGRVVRTLEGHSDAVTSLQF----DSLNLVTGSL 625
Query: 442 DCKLRIWSIRSGELVFEDKFSNSVP 466
D +RIW +R+G L D FS P
Sbjct: 626 DNSIRIWDLRTGTLA--DTFSYEHP 648
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 326 RKRQRGCSSRAGRRHRIPYS-RLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQ 384
R +Q G S + + + R R T +Q++E ANI S + +++CL
Sbjct: 363 RSKQTGYSHKNHEKKVQQHEFRHLRKTYPTLQQYYEPGANIL-SFDSAHEDNVTCLDFNL 421
Query: 385 LYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCK 444
+ A +D T+K+++ L+ V S GH+ + + +Q+ DQ + +GG D
Sbjct: 422 PFGTLCSAGKLDPTIKVWN--LSKNKHVASITGHLATVSCMQM--DQYNTLI-TGGRDAL 476
Query: 445 LRIWSIRSGELVFEDKFSNSVPS-AVCWRT 473
L++W I+ ++S+PS VC T
Sbjct: 477 LKMWDIQKA------IDNDSIPSDEVCIYT 500
>sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii
GN=SNRNP40 PE=2 SV=1
Length = 357
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 351 DRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRG 410
D T E+ LK HT+F+ S + QL S DGTVKL+D R +
Sbjct: 137 DSETGERVKRLKG-----HTSFVNSCYPARRGPQL----VCTGSDDGTVKLWDIR--KKA 185
Query: 411 AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVF 457
A+Q+++ N++ + + + + ++SGG D +++W +R +L +
Sbjct: 186 AIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 229
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 14/107 (13%)
Query: 351 DRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRG 410
D T E+ LK HT+F+ S + QL S DGTVKL+D R +
Sbjct: 137 DSETGERVKRLKG-----HTSFVNSCYPARRGPQL----VCTGSDDGTVKLWDIR--KKA 185
Query: 411 AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVF 457
A+Q+++ N++ + + + + ++SGG D +++W +R +L +
Sbjct: 186 AIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 229
>sp|A1DDL6|MDV1_NEOFI Mitochondrial division protein 1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mdv1
PE=3 SV=1
Length = 658
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 375 SSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAV-QSYEGHVNSHTRIQLGVDQSE 433
+S + +LQ +D + DG V+L+D R G V +S GH T +Q E
Sbjct: 502 ASADFVGALQCFDAALACGTADGMVRLWDLR---SGQVHRSLVGHTGPITCLQF----DE 554
Query: 434 RFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAVCWRTQRSMGPQIEGKIHEEFDLG 492
+++G +D +RIW +R G + D ++ P +++ + T+R + E + + +D
Sbjct: 555 VHLVTGSQDRSIRIWDLRMGSIF--DAYAYDKPITSMMFDTKRIVAAAGENVV-KVYDKA 611
Query: 493 QRHSWE--AWIGTQE 505
H W+ A +G E
Sbjct: 612 DGHHWDCGAGVGADE 626
>sp|Q4WVS4|MDV1_ASPFU Mitochondrial division protein 1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mdv1
PE=3 SV=2
Length = 658
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 375 SSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAV-QSYEGHVNSHTRIQLGVDQSE 433
+S + +LQ +D + DG V+L+D R G V +S GH T +Q E
Sbjct: 502 ASADFVGALQCFDAALACGTADGMVRLWDLR---SGQVHRSLVGHTGPITCLQF----DE 554
Query: 434 RFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAVCWRTQRSMGPQIEGKIHEEFDLG 492
+++G +D +RIW +R G + D ++ P +++ + T+R + E + + +D
Sbjct: 555 VHLVTGSQDRSIRIWDLRMGSIF--DAYAYDKPITSMMFDTKRIVAAAGENVV-KVYDKA 611
Query: 493 QRHSWE--AWIGTQE 505
H W+ A +G E
Sbjct: 612 DGHHWDCGAGVGADE 626
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 369 HTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLG 428
HT+F+ S + QL S DGTVKL+D R + A+Q+++ N++ + +
Sbjct: 151 HTSFVNSCYPARRGPQL----VCTGSDDGTVKLWDIR--KKAAIQTFQ---NTYQVLAVT 201
Query: 429 VDQSERFVMSGGEDCKLRIWSIRSGELVF 457
+ + ++SGG D +++W +R +L +
Sbjct: 202 FNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 375 SSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSER 434
+SI C+ + ++ + S D VKL+D R +G + +Y+GH + I+ D +
Sbjct: 102 NSIRCMD-FHPFGEFVASGSTDTNVKLWDVR--RKGCIYTYKGHSDQVNMIKFSPDG--K 156
Query: 435 FVMSGGEDCKLRIWSIRSGELVFEDK 460
++++ ED +++W + G+L E K
Sbjct: 157 WLVTASEDTTIKLWDLTMGKLFQEFK 182
Score = 33.5 bits (75), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446
++ +A S GT+K+YD L V++ GH NS R + FV SG D ++
Sbjct: 71 EELVVAGSQSGTMKIYD--LEPAKIVRTLTGHRNS-IRC-MDFHPFGEFVASGSTDTNVK 126
Query: 447 IWSIRSGELVF 457
+W +R ++
Sbjct: 127 LWDVRRKGCIY 137
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRG-AVQSYEGHVNSHTRIQLGVDQSER-FVMSGGEDCKL 445
+Y L +++D T+KL+D+ +RG +++Y GH N + + R +V+SG ED +
Sbjct: 221 KYILTATLDNTLKLWDY---SRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMV 277
Query: 446 RIWSIRSGELV 456
IW++++ E+V
Sbjct: 278 YIWNLQTKEIV 288
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRG-AVQSYEGHVNSHTRIQLGVDQS-ERFVMSGGEDCKL 445
+Y LA+++D T+KL+D+ ++G +++Y GH N I + ++++SG ED +
Sbjct: 227 KYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 446 RIWSIRSGELV 456
IW++++ E+V
Sbjct: 284 YIWNLQTKEIV 294
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRG-AVQSYEGHVNSHTRIQLGVDQS-ERFVMSGGEDCKL 445
+Y LA+++D T+KL+D+ ++G +++Y GH N I + ++++SG ED +
Sbjct: 227 KYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 446 RIWSIRSGELV 456
IW++++ E+V
Sbjct: 284 YIWNLQTKEIV 294
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRG-AVQSYEGHVNSHTRIQLGVDQS-ERFVMSGGEDCKL 445
+Y LA+++D T+KL+D+ ++G +++Y GH N I + ++++SG ED +
Sbjct: 227 KYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 446 RIWSIRSGELV 456
IW++++ E+V
Sbjct: 284 YIWNLQTKEIV 294
>sp|Q6DH44|WDR83_DANRE WD repeat domain-containing protein 83 OS=Danio rerio GN=wdr83 PE=2
SV=1
Length = 315
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 22/196 (11%)
Query: 303 QVIHSGNVVLCGFRNGAIVTVDVRKR-----------QRGCSSRAGRRHRIPYSRLQRND 351
Q V+L G +G + D R R Q G SS H + +
Sbjct: 116 QFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSEHELLTGSVDGRV 175
Query: 352 RVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGA 411
R + + +L+ + ++ S I+C+ Q L+SS+D TV+L D +T
Sbjct: 176 RRYDLRMGQLQVD-------YIGSPITCV-CFSRDGQCTLSSSLDSTVRLLDK--STGEM 225
Query: 412 VQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCW 471
+ Y GHVN ++ + + V+S ED + W + G L + +V ++ +
Sbjct: 226 LGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSF 285
Query: 472 R-TQRSMGPQIEGKIH 486
T+ + +EG++
Sbjct: 286 HPTEPRLLTSMEGRVQ 301
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRG-AVQSYEGHVNSHTRIQLGVDQS-ERFVMSGGEDCKL 445
+Y LA+++D T+KL+D+ ++G +++Y GH N I + ++++SG ED +
Sbjct: 227 KYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 446 RIWSIRSGELV 456
IW++++ E+V
Sbjct: 284 YIWNLQTKEIV 294
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE-RFVMSGGEDCKLR 446
+Y LAS+++ T+KL+D++ ++ Y GH NS + + ++++SG ED K+
Sbjct: 288 KYILASNLNNTLKLWDYQKLR--VLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHKVY 345
Query: 447 IWSIRSGELV 456
IW++++ E++
Sbjct: 346 IWNLQTREIL 355
>sp|O74184|WAT1_SCHPO WD repeat-containing protein wat1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=wat1 PE=1 SV=1
Length = 314
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446
D+ FLA++ + V+LYD +++ + ++EGH N+ T I D +++ + ED ++
Sbjct: 51 DKKFLAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDG--KWLATSSEDGTVK 108
Query: 447 IWSIRS 452
+W +R+
Sbjct: 109 VWDMRA 114
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRG-AVQSYEGHVNSHTRIQLGVDQSE-RFVMSGGEDCKL 445
+Y L +++D T+KL+D+ +RG +++Y GH N I + ++++SG ED +
Sbjct: 223 KYILTATLDNTLKLWDY---SRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 279
Query: 446 RIWSIRSGELVFE-DKFSNSVPSAVCWRTQR 475
IW++++ E+V + ++ V SA C T+
Sbjct: 280 YIWNLQTKEIVQKLQGHTDVVISAACHPTEN 310
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 388 QYFLASSMDGTVKLYDHRLTTRG-AVQSYEGHVNSHTRIQLGVDQSE-RFVMSGGEDCKL 445
+Y L +++D T+KL+D+ +RG +++Y GH N I + ++++SG ED +
Sbjct: 223 KYILTATLDNTLKLWDY---SRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 279
Query: 446 RIWSIRSGELVFE-DKFSNSVPSAVCWRTQR 475
IW++++ E+V + ++ V SA C T+
Sbjct: 280 YIWNLQTKEIVQKLQGHTDVVISAACHPTEN 310
>sp|Q6CJ50|MDV1_KLULA Mitochondrial division protein 1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=MDV1 PE=3 SV=1
Length = 705
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 364 NIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHT 423
NI ++ + + +LQ +D + DG V+L+D R + V+ EGH ++ T
Sbjct: 544 NIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLR--SGKVVRMLEGHTDAIT 601
Query: 424 RIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP 466
+Q +++G D +RIW +R+G + D F+ P
Sbjct: 602 SLQF----DSVNLVTGAMDRSIRIWDLRTG--ILSDVFAYEQP 638
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 17/145 (11%)
Query: 324 DVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSS----ISC 379
D+ +R++ +S+ + + + +R T +Q+++ + I T +P + I+C
Sbjct: 348 DISERKKHSTSKKIKDVGVSHRNRRRKTYPTLQQFYDSGSKI-----TSLPKAHDEDITC 402
Query: 380 LQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSG 439
L + A S+D +VK++D L+ + + + GH+ S + +Q +DQ + +G
Sbjct: 403 LDFDMPFGTMCSAGSLDHSVKVWD--LSKKKQIATLHGHLASISCMQ--IDQYSTLI-TG 457
Query: 440 GEDCKLRIWSIRSGELVFEDKFSNS 464
G D L++W I + D+ SNS
Sbjct: 458 GRDAVLKLWDI---DKAMADEASNS 479
>sp|A1CBP8|MDV1_ASPCL Mitochondrial division protein 1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=mdv1 PE=3 SV=1
Length = 655
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 358 WFELKANIWPSHTTFMPS------SISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGA 411
W +A+ + T + PS S + ++Q +D + DG V+L+D R G
Sbjct: 476 WAAAQASTIGADTQWRPSGRLPDASADFVGAVQCFDAALACGTADGMVRLWDLR---SGQ 532
Query: 412 V-QSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAV 469
V +S GH T +Q E +++G +D +RIW +R G + D F+ P +++
Sbjct: 533 VHRSLVGHTGPITCLQF----DEVHLVTGSQDRSIRIWDLRMGSIF--DAFAYEKPITSM 586
Query: 470 CWRTQRSMGPQIEGKIHEEFDLGQRHSWE--AWIGTQE 505
+ T+R + E + + +D + W+ A +G E
Sbjct: 587 MFDTKRIVAAAGENVV-KVYDKADSNHWDCGAGLGADE 623
>sp|Q0U2T3|MDV1_PHANO Mitochondrial division protein 1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=MDV1 PE=3 SV=2
Length = 681
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 373 MPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAV-QSYEGHVNSHTRIQLGVDQ 431
M +S + ++Q++D + DG V+L+D R G V +S GH T +Q
Sbjct: 522 MDASADFVGAIQVFDAALACGTADGMVRLWDLR---SGQVHRSLVGHTGPVTALQF---- 574
Query: 432 SERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAV 469
+ +++G D +RIW +R+G + + N V S +
Sbjct: 575 DDVHLVTGSADRSIRIWDLRTGSIYDAYAYDNPVTSMM 612
>sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3H5.08c PE=1 SV=2
Length = 933
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446
+ + L+SSMD T +L+ + + +E H + T I + +RF +SG DCKLR
Sbjct: 398 NNFLLSSSMDKTARLW--HPVRKDCLCCFE-HSDFVTSIAFHP-KDDRFFLSGSLDCKLR 453
Query: 447 IWSIRSGELVF 457
+WSI+ + F
Sbjct: 454 LWSIKEKAVSF 464
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446
D L ++ D +++Y+ L + ++GH N+ ++ + D +V+ G ED ++
Sbjct: 538 DTEMLVTTNDSRIRIYN--LRDKSLELKFKGHANAQSQNRAYFDDDGNYVICGSEDHQVF 595
Query: 447 IWSI 450
IW +
Sbjct: 596 IWDL 599
>sp|A0JP70|WDR90_XENTR WD repeat-containing protein 90 OS=Xenopus tropicalis GN=wdr90 PE=2
SV=1
Length = 1848
Score = 40.0 bits (92), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 411 AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVC 470
+++ GH N + L V E + GED LRIWS++S EL+ + + N +
Sbjct: 1526 SIRLISGHRNK--VMDLAVAHGESHCATCGEDGSLRIWSLQSCELLLQFQVLNQSCLCLA 1583
Query: 471 WRTQRSMGPQIEGK 484
W Q GP E +
Sbjct: 1584 WSPQPKSGPSTEDQ 1597
>sp|Q6FT96|MDV1_CANGA Mitochondrial division protein 1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=MDV1 PE=3 SV=1
Length = 711
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 382 SLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE 441
S+Q +D + DG ++L+D R T V+ EGH+++ T ++ ++SG
Sbjct: 569 SIQSFDAALATGTKDGLIRLWDMR--TGEVVRVLEGHMDAITSLKFDA----TTIISGSL 622
Query: 442 DCKLRIWSIRSGEL 455
D +R+W +RS L
Sbjct: 623 DGTIRLWDLRSNNL 636
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
Query: 376 SISCLQSLQLYDQYF----LASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQ 431
+I+CL +D +F A MD VKL+D+ T + + + EGHV + + +Q VD+
Sbjct: 406 AITCLD----FDPHFSTLCTAGYMDHIVKLWDY--TKKRQIGAMEGHVATISCMQ--VDK 457
Query: 432 SERFVMSGGEDCKLRIWS 449
+ V +G +D +++W+
Sbjct: 458 NYNMVATGSKDATVKLWN 475
>sp|P42527|MHCKA_DICDI Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1
SV=2
Length = 1146
Score = 39.7 bits (91), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446
++Y + S D T+K++D L+T ++S+EG HT+ + S R++ SGG D +
Sbjct: 964 EKYLFSCSYDKTIKVWD--LSTFKEIKSFEG---VHTKYIKTLALSGRYLFSGGNDQIIY 1018
Query: 447 IWSIRSGELVF 457
+W + ++F
Sbjct: 1019 VWDTETLSMLF 1029
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 382 SLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE 441
SL Y ++S D +K++D L+ + + +GH NS + + +R++ SG E
Sbjct: 1040 SLHCTASYLFSTSKDNVIKIWD--LSNFSCIDTLKGHWNSVSSCVV----KDRYLYSGSE 1093
Query: 442 DCKLRIWSIRSGELVF 457
D +++W + + E V+
Sbjct: 1094 DNSIKVWDLDTLECVY 1109
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 26/101 (25%)
Query: 375 SSISCLQSLQLYD-------------QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVN- 420
+S SCL++L D +Y L++ +D ++KL+D + ++ Y GH N
Sbjct: 369 ASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWDPK--KAKPLKYYNGHKNK 426
Query: 421 -----SHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELV 456
++ + LG + ++SG ED ++ +WSI++ ++V
Sbjct: 427 KYCLFANMSVPLG-----KHIISGSEDGRILVWSIQTKQIV 462
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,127,067
Number of Sequences: 539616
Number of extensions: 7627249
Number of successful extensions: 19483
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 18869
Number of HSP's gapped (non-prelim): 899
length of query: 513
length of database: 191,569,459
effective HSP length: 122
effective length of query: 391
effective length of database: 125,736,307
effective search space: 49162896037
effective search space used: 49162896037
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)