Query 037288
Match_columns 513
No_of_seqs 548 out of 3707
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 18:16:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 3.7E-33 1.3E-37 272.0 31.3 271 115-485 40-312 (321)
2 1nr0_A Actin interacting prote 100.0 1.2E-31 4.2E-36 284.5 36.0 339 110-486 62-559 (611)
3 2ynn_A Coatomer subunit beta'; 100.0 4.2E-31 1.4E-35 255.4 36.0 244 222-484 33-293 (304)
4 1got_B GT-beta; complex (GTP-b 100.0 3.1E-31 1.1E-35 260.5 33.7 214 222-484 117-333 (340)
5 1vyh_C Platelet-activating fac 100.0 3.7E-31 1.3E-35 266.9 33.6 263 186-485 107-402 (410)
6 4gqb_B Methylosome protein 50; 100.0 3.6E-31 1.2E-35 260.2 32.2 226 252-485 78-322 (344)
7 4g56_B MGC81050 protein; prote 100.0 8.3E-31 2.8E-35 259.3 31.7 247 223-486 69-335 (357)
8 2pbi_B Guanine nucleotide-bind 100.0 3.6E-30 1.2E-34 254.4 36.2 273 114-484 71-347 (354)
9 2ynn_A Coatomer subunit beta'; 100.0 1E-29 3.5E-34 245.6 36.1 230 249-486 6-251 (304)
10 1vyh_C Platelet-activating fac 100.0 8.1E-30 2.8E-34 257.1 35.8 227 249-485 101-360 (410)
11 4ery_A WD repeat-containing pr 100.0 4.1E-29 1.4E-33 242.1 35.4 244 221-482 42-298 (312)
12 1got_B GT-beta; complex (GTP-b 100.0 1.1E-28 3.8E-33 242.3 37.9 232 248-486 47-293 (340)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.2E-29 1.8E-33 245.2 35.5 232 252-486 57-327 (345)
14 3ow8_A WD repeat-containing pr 100.0 4.5E-29 1.5E-33 243.0 33.4 227 250-486 26-271 (321)
15 3iz6_a 40S ribosomal protein R 100.0 1.9E-29 6.5E-34 251.7 31.5 276 113-486 72-367 (380)
16 2ymu_A WD-40 repeat protein; u 100.0 9.5E-29 3.2E-33 260.2 37.9 236 222-484 323-570 (577)
17 1nr0_A Actin interacting prote 100.0 3.7E-29 1.3E-33 265.4 34.0 250 221-484 209-601 (611)
18 2ymu_A WD-40 repeat protein; u 100.0 9.5E-28 3.3E-32 252.5 42.7 237 222-485 282-530 (577)
19 1erj_A Transcriptional repress 100.0 1.1E-28 3.7E-33 247.4 33.3 218 221-486 142-381 (393)
20 4gqb_B Methylosome protein 50; 100.0 1.7E-28 5.8E-33 241.2 33.7 218 221-455 100-334 (344)
21 2hes_X YDR267CP; beta-propelle 100.0 1.1E-28 3.6E-33 241.4 30.9 221 222-485 78-319 (330)
22 4g56_B MGC81050 protein; prote 100.0 2.1E-28 7.2E-33 242.0 33.2 217 222-455 113-346 (357)
23 3iz6_a 40S ribosomal protein R 100.0 8.2E-29 2.8E-33 247.1 29.9 234 248-485 58-320 (380)
24 2pm7_B Protein transport prote 100.0 3.2E-28 1.1E-32 234.3 32.2 233 250-486 3-277 (297)
25 2xzm_R RACK1; ribosome, transl 100.0 9.5E-28 3.2E-32 235.9 35.8 225 250-484 70-330 (343)
26 3frx_A Guanine nucleotide-bind 100.0 1.3E-27 4.6E-32 232.4 35.2 225 249-484 10-258 (319)
27 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.7E-28 9.1E-33 240.1 30.2 234 248-485 7-274 (345)
28 4h5i_A Guanine nucleotide-exch 100.0 1.7E-28 5.8E-33 243.4 28.1 196 253-486 130-335 (365)
29 3frx_A Guanine nucleotide-bind 100.0 7.5E-28 2.6E-32 234.2 31.9 210 221-485 84-308 (319)
30 2pbi_B Guanine nucleotide-bind 100.0 3.9E-27 1.3E-31 232.6 37.4 231 248-485 56-306 (354)
31 1erj_A Transcriptional repress 100.0 1.3E-27 4.4E-32 239.6 34.2 225 252-486 60-333 (393)
32 2pm9_A Protein WEB1, protein t 100.0 1.7E-28 5.9E-33 247.0 24.2 246 222-484 87-404 (416)
33 3vl1_A 26S proteasome regulato 100.0 2.1E-27 7.3E-32 239.6 31.5 249 222-488 117-414 (420)
34 1gxr_A ESG1, transducin-like e 100.0 1.6E-26 5.5E-31 225.3 36.7 243 223-484 71-327 (337)
35 1r5m_A SIR4-interacting protei 100.0 1.4E-26 4.9E-31 233.0 35.6 238 222-484 128-415 (425)
36 2xzm_R RACK1; ribosome, transl 100.0 6.4E-27 2.2E-31 230.0 31.9 225 249-483 14-275 (343)
37 3k26_A Polycomb protein EED; W 100.0 2E-27 6.8E-32 234.5 27.8 235 222-485 93-357 (366)
38 4ery_A WD repeat-containing pr 100.0 8.5E-26 2.9E-30 218.7 37.2 228 249-486 16-260 (312)
39 2pm9_A Protein WEB1, protein t 100.0 4.2E-27 1.4E-31 236.8 27.1 249 221-486 42-329 (416)
40 2hes_X YDR267CP; beta-propelle 100.0 2.3E-26 8E-31 224.7 31.4 231 248-484 6-270 (330)
41 3bg1_A Protein SEC13 homolog; 100.0 7.9E-28 2.7E-32 233.7 20.4 232 251-486 8-285 (316)
42 1pgu_A Actin interacting prote 100.0 9.8E-26 3.4E-30 238.6 37.4 246 221-486 180-564 (615)
43 3mmy_A MRNA export factor; mRN 100.0 4.1E-26 1.4E-30 225.1 32.1 248 222-486 62-338 (368)
44 1sq9_A Antiviral protein SKI8; 100.0 8E-27 2.7E-31 233.4 26.0 214 222-484 89-385 (397)
45 3dw8_B Serine/threonine-protei 100.0 2.1E-26 7.2E-31 234.1 28.4 208 252-484 173-437 (447)
46 3jrp_A Fusion protein of prote 100.0 3.5E-26 1.2E-30 226.7 29.1 232 249-484 4-277 (379)
47 3zwl_B Eukaryotic translation 100.0 5.6E-25 1.9E-29 217.0 37.2 267 186-486 31-338 (369)
48 3zwl_B Eukaryotic translation 100.0 5.2E-25 1.8E-29 217.3 36.9 227 248-484 24-280 (369)
49 4e54_B DNA damage-binding prot 100.0 4.7E-26 1.6E-30 231.4 30.1 248 220-484 138-421 (435)
50 1k8k_C P40, ARP2/3 complex 41 100.0 4.2E-26 1.4E-30 225.8 28.9 228 252-483 4-264 (372)
51 1yfq_A Cell cycle arrest prote 100.0 5.6E-26 1.9E-30 222.3 29.2 246 222-486 31-315 (342)
52 3odt_A Protein DOA1; ubiquitin 100.0 6E-25 2.1E-29 211.9 35.9 224 248-483 10-245 (313)
53 3dm0_A Maltose-binding peripla 99.9 1.5E-25 5.2E-30 241.3 33.9 226 250-484 376-623 (694)
54 4aow_A Guanine nucleotide-bind 99.9 6E-25 2.1E-29 214.6 35.0 227 249-484 31-277 (340)
55 3dwl_C Actin-related protein 2 99.9 1.5E-27 5.1E-32 237.2 16.6 230 252-486 7-274 (377)
56 3dm0_A Maltose-binding peripla 99.9 4E-25 1.4E-29 238.0 36.8 250 221-486 402-685 (694)
57 3sfz_A APAF-1, apoptotic pepti 99.9 8.8E-26 3E-30 258.7 32.7 181 295-486 1002-1201(1249)
58 3f3f_A Nucleoporin SEH1; struc 99.9 2.3E-25 7.9E-30 217.5 30.9 233 251-486 6-329 (351)
59 4aez_A CDC20, WD repeat-contai 99.9 1.9E-25 6.3E-30 224.4 30.8 216 222-459 154-387 (401)
60 1k8k_C P40, ARP2/3 complex 41 99.9 1.4E-25 4.8E-30 222.0 29.2 216 222-486 72-353 (372)
61 1r5m_A SIR4-interacting protei 99.9 4.9E-25 1.7E-29 221.8 33.6 219 254-484 106-351 (425)
62 3ei3_B DNA damage-binding prot 99.9 3.7E-25 1.3E-29 220.5 31.9 242 222-482 94-371 (383)
63 3odt_A Protein DOA1; ubiquitin 99.9 9.7E-25 3.3E-29 210.4 33.6 206 222-485 79-288 (313)
64 3i2n_A WD repeat-containing pr 99.9 9.8E-26 3.3E-30 221.7 26.9 243 222-484 42-343 (357)
65 1gxr_A ESG1, transducin-like e 99.9 1.4E-24 4.9E-29 211.4 34.4 226 250-485 45-287 (337)
66 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.1E-24 3.8E-29 221.8 34.7 235 221-485 176-429 (445)
67 2pm7_B Protein transport prote 99.9 1.9E-25 6.5E-30 214.9 27.1 185 221-451 74-284 (297)
68 2j04_B YDR362CP, TAU91; beta p 99.9 2.8E-26 9.7E-31 237.0 22.8 214 221-478 232-458 (524)
69 3mkq_A Coatomer beta'-subunit; 99.9 7.4E-25 2.5E-29 240.0 35.3 243 222-483 33-292 (814)
70 3gre_A Serine/threonine-protei 99.9 2.5E-26 8.6E-31 233.2 21.8 169 255-461 167-368 (437)
71 4ggc_A P55CDC, cell division c 99.9 7.7E-25 2.6E-29 211.8 31.1 221 259-486 28-307 (318)
72 2j04_B YDR362CP, TAU91; beta p 99.9 2.1E-26 7.2E-31 238.0 20.8 207 276-486 182-420 (524)
73 4aow_A Guanine nucleotide-bind 99.9 1E-23 3.5E-28 205.9 38.4 247 221-484 58-327 (340)
74 3sfz_A APAF-1, apoptotic pepti 99.9 1.7E-24 5.8E-29 248.1 37.9 330 112-485 620-1066(1249)
75 3vl1_A 26S proteasome regulato 99.9 9.6E-25 3.3E-29 220.1 31.3 244 222-486 76-357 (420)
76 1sq9_A Antiviral protein SKI8; 99.9 8.4E-25 2.9E-29 218.7 30.5 230 249-486 9-314 (397)
77 3v7d_B Cell division control p 99.9 2.7E-24 9.2E-29 220.0 35.0 223 251-484 157-412 (464)
78 2oaj_A Protein SNI1; WD40 repe 99.9 7.1E-25 2.4E-29 241.6 32.3 259 221-486 117-597 (902)
79 3lrv_A PRE-mRNA-splicing facto 99.9 8.2E-25 2.8E-29 214.9 29.4 178 253-473 122-309 (343)
80 3mkq_A Coatomer beta'-subunit; 99.9 1.6E-24 5.5E-29 237.3 34.6 228 249-484 6-249 (814)
81 4h5i_A Guanine nucleotide-exch 99.9 1.1E-25 3.8E-30 223.1 22.9 183 220-453 153-344 (365)
82 2aq5_A Coronin-1A; WD40 repeat 99.9 2.5E-25 8.5E-30 223.5 25.6 249 220-484 53-334 (402)
83 4gga_A P55CDC, cell division c 99.9 8.5E-24 2.9E-28 213.7 35.6 245 223-486 124-387 (420)
84 3f3f_A Nucleoporin SEH1; struc 99.9 4.3E-24 1.5E-28 208.4 31.7 227 222-459 31-344 (351)
85 3bg1_A Protein SEC13 homolog; 99.9 1.9E-25 6.6E-30 216.8 21.8 189 221-451 78-292 (316)
86 4gga_A P55CDC, cell division c 99.9 2.1E-24 7.1E-29 218.2 30.2 222 221-463 166-406 (420)
87 4gq1_A NUP37; propeller, trans 99.9 5.2E-25 1.8E-29 220.6 24.8 245 220-485 107-381 (393)
88 3dwl_C Actin-related protein 2 99.9 2.7E-25 9.1E-30 220.9 21.9 214 222-451 31-280 (377)
89 3i2n_A WD repeat-containing pr 99.9 3.5E-24 1.2E-28 210.6 29.0 228 250-486 12-283 (357)
90 3vu4_A KMHSV2; beta-propeller 99.9 3.8E-24 1.3E-28 211.3 28.2 224 249-486 12-263 (355)
91 3ei3_B DNA damage-binding prot 99.9 6.5E-24 2.2E-28 211.5 29.6 206 248-461 65-291 (383)
92 1p22_A F-BOX/WD-repeat protein 99.9 6E-24 2E-28 215.8 29.7 217 252-485 169-405 (435)
93 1yfq_A Cell cycle arrest prote 99.9 5E-24 1.7E-28 208.4 27.7 222 252-484 7-272 (342)
94 4a11_B DNA excision repair pro 99.9 8.9E-24 3E-28 211.5 29.7 229 247-486 34-357 (408)
95 2xyi_A Probable histone-bindin 99.9 1.4E-23 4.8E-28 212.8 31.2 232 249-485 121-401 (430)
96 3jro_A Fusion protein of prote 99.9 7.8E-25 2.7E-29 237.5 23.0 233 250-486 3-277 (753)
97 3k26_A Polycomb protein EED; W 99.9 2.3E-24 7.7E-29 212.5 24.3 226 251-486 13-310 (366)
98 4e54_B DNA damage-binding prot 99.9 1.5E-24 5E-29 220.3 23.2 224 251-480 114-361 (435)
99 3v7d_B Cell division control p 99.9 1.2E-23 4.2E-28 215.1 30.0 221 249-484 114-371 (464)
100 4aez_A CDC20, WD repeat-contai 99.9 7E-23 2.4E-27 205.6 33.8 223 249-481 84-321 (401)
101 2j04_A TAU60, YPL007P, hypothe 99.9 2.7E-23 9.1E-28 210.6 28.7 260 164-486 10-290 (588)
102 4ggc_A P55CDC, cell division c 99.9 9.9E-23 3.4E-27 196.9 30.3 213 221-454 86-317 (318)
103 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.8E-22 6.2E-27 205.8 33.5 225 252-483 98-374 (450)
104 3jrp_A Fusion protein of prote 99.9 4.3E-23 1.5E-27 204.4 27.7 187 222-454 77-289 (379)
105 3dw8_B Serine/threonine-protei 99.9 8.1E-24 2.8E-28 215.0 21.8 227 254-486 26-365 (447)
106 1pgu_A Actin interacting prote 99.9 4.3E-23 1.5E-27 218.3 27.6 221 253-484 15-273 (615)
107 3gre_A Serine/threonine-protei 99.9 1.7E-23 5.7E-28 212.4 23.4 211 248-486 54-284 (437)
108 4a11_B DNA excision repair pro 99.9 5.6E-22 1.9E-26 198.4 33.7 234 222-461 64-374 (408)
109 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1E-22 3.4E-27 207.7 28.5 217 257-482 5-326 (450)
110 2oaj_A Protein SNI1; WD40 repe 99.9 1E-22 3.5E-27 224.4 30.4 223 250-483 11-296 (902)
111 1p22_A F-BOX/WD-repeat protein 99.9 2.5E-22 8.6E-27 203.8 31.0 215 252-484 129-355 (435)
112 2aq5_A Coronin-1A; WD40 repeat 99.9 5.8E-23 2E-27 206.2 24.8 220 222-456 102-346 (402)
113 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.8E-21 6.3E-26 198.0 35.8 232 221-484 136-381 (445)
114 2xyi_A Probable histone-bindin 99.9 2.6E-22 8.8E-27 203.5 28.4 190 221-453 201-411 (430)
115 2w18_A PALB2, fancn, partner a 99.9 3.9E-22 1.3E-26 190.1 25.9 162 249-450 171-355 (356)
116 3mmy_A MRNA export factor; mRN 99.9 1.2E-21 4.2E-26 192.9 30.2 229 247-486 30-296 (368)
117 2w18_A PALB2, fancn, partner a 99.9 9.4E-22 3.2E-26 187.4 26.5 198 253-485 133-348 (356)
118 2j04_A TAU60, YPL007P, hypothe 99.9 1.1E-21 3.6E-26 198.9 25.2 275 115-484 23-351 (588)
119 2hqs_A Protein TOLB; TOLB, PAL 99.9 3E-20 1E-24 187.2 32.9 223 224-474 159-408 (415)
120 3vu4_A KMHSV2; beta-propeller 99.9 6.1E-21 2.1E-25 188.2 27.0 205 223-484 80-326 (355)
121 3jro_A Fusion protein of prote 99.9 1.7E-21 5.7E-26 211.4 24.6 217 222-452 29-285 (753)
122 1l0q_A Surface layer protein; 99.9 1.4E-19 4.8E-24 180.4 35.8 206 222-484 52-265 (391)
123 3lrv_A PRE-mRNA-splicing facto 99.9 1E-21 3.6E-26 192.7 18.4 205 220-483 54-280 (343)
124 3bws_A Protein LP49; two-domai 99.9 2.9E-19 9.9E-24 180.7 34.9 240 222-481 142-418 (433)
125 4gq1_A NUP37; propeller, trans 99.9 9.3E-21 3.2E-25 189.6 23.4 259 121-450 99-387 (393)
126 3bws_A Protein LP49; two-domai 99.8 1.8E-18 6.1E-23 174.9 28.9 207 222-452 189-432 (433)
127 2oit_A Nucleoporin 214KDA; NH2 99.8 3E-19 1E-23 180.8 17.4 185 257-480 37-257 (434)
128 1l0q_A Surface layer protein; 99.8 1.2E-17 4E-22 166.5 28.7 204 221-481 9-218 (391)
129 2ojh_A Uncharacterized protein 99.8 4E-18 1.4E-22 162.1 23.0 243 220-484 18-292 (297)
130 2ecf_A Dipeptidyl peptidase IV 99.8 4.3E-17 1.5E-21 176.6 31.8 240 224-481 129-442 (741)
131 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.8E-17 6.3E-22 166.8 26.5 234 225-482 94-372 (415)
132 1ri6_A Putative isomerase YBHE 99.8 5.4E-16 1.8E-20 150.9 29.4 189 258-481 85-295 (343)
133 1nir_A Nitrite reductase; hemo 99.7 9.6E-16 3.3E-20 159.3 29.9 238 222-482 157-439 (543)
134 1nir_A Nitrite reductase; hemo 99.7 6.1E-16 2.1E-20 160.8 28.1 239 224-481 200-496 (543)
135 2z3z_A Dipeptidyl aminopeptida 99.7 6.8E-16 2.3E-20 166.2 25.2 238 224-480 101-417 (706)
136 1xfd_A DIP, dipeptidyl aminope 99.7 7.7E-16 2.6E-20 166.2 25.4 242 223-480 90-426 (723)
137 3vgz_A Uncharacterized protein 99.7 2.7E-14 9.1E-19 139.7 33.0 187 259-486 143-337 (353)
138 1pby_B Quinohemoprotein amine 99.7 5.3E-15 1.8E-19 143.5 27.7 188 258-462 83-320 (337)
139 3u4y_A Uncharacterized protein 99.7 5.2E-15 1.8E-19 143.6 27.6 213 223-484 61-294 (331)
140 1k32_A Tricorn protease; prote 99.7 7.2E-16 2.5E-20 173.3 24.1 183 254-480 293-488 (1045)
141 3o4h_A Acylamino-acid-releasin 99.7 1.1E-15 3.7E-20 160.9 23.9 173 261-484 114-302 (582)
142 3hfq_A Uncharacterized protein 99.7 2.8E-14 9.5E-19 139.6 30.1 230 253-483 36-306 (347)
143 2ecf_A Dipeptidyl peptidase IV 99.7 6.2E-15 2.1E-19 159.6 26.3 215 258-483 110-400 (741)
144 2ojh_A Uncharacterized protein 99.7 7E-15 2.4E-19 139.4 23.4 199 276-483 21-236 (297)
145 3hfq_A Uncharacterized protein 99.7 1.8E-13 6.3E-18 133.7 32.1 205 251-458 80-325 (347)
146 2oit_A Nucleoporin 214KDA; NH2 99.7 1.1E-15 3.8E-20 154.5 15.7 160 254-453 90-279 (434)
147 3vgz_A Uncharacterized protein 99.6 5.1E-14 1.7E-18 137.6 26.8 217 255-483 39-292 (353)
148 3o4h_A Acylamino-acid-releasin 99.6 2.1E-15 7.2E-20 158.6 17.7 215 256-484 21-266 (582)
149 1xfd_A DIP, dipeptidyl aminope 99.6 1.9E-15 6.5E-20 163.1 17.0 214 258-478 18-320 (723)
150 2z3z_A Dipeptidyl aminopeptida 99.6 1.7E-14 6E-19 155.2 24.5 218 257-483 82-376 (706)
151 1k32_A Tricorn protease; prote 99.6 3.3E-14 1.1E-18 159.7 25.6 185 251-482 240-439 (1045)
152 1ri6_A Putative isomerase YBHE 99.6 2.3E-13 8E-18 132.2 26.1 213 222-483 13-251 (343)
153 3u4y_A Uncharacterized protein 99.6 2E-13 6.7E-18 132.4 25.2 204 222-482 18-240 (331)
154 3scy_A Hypothetical bacterial 99.6 2.5E-12 8.6E-17 126.4 31.0 221 255-481 48-324 (361)
155 3scy_A Hypothetical bacterial 99.6 7.4E-12 2.5E-16 123.0 34.0 215 252-472 95-360 (361)
156 1pby_B Quinohemoprotein amine 99.6 5.1E-13 1.7E-17 129.4 24.0 211 258-482 35-298 (337)
157 1jmx_B Amine dehydrogenase; ox 99.5 6.3E-13 2.2E-17 129.5 22.8 221 222-462 19-335 (349)
158 1z68_A Fibroblast activation p 99.5 1.6E-14 5.4E-19 155.9 12.3 208 261-476 20-324 (719)
159 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.7E-12 5.9E-17 128.0 23.6 226 257-483 40-329 (365)
160 1jmx_B Amine dehydrogenase; ox 99.5 3E-12 1E-16 124.7 24.3 210 261-482 4-313 (349)
161 1z68_A Fibroblast activation p 99.5 1.2E-12 4.1E-17 141.1 22.9 215 257-478 110-424 (719)
162 2oiz_A Aromatic amine dehydrog 99.5 4.8E-11 1.6E-15 117.4 29.3 229 222-475 29-359 (361)
163 4a5s_A Dipeptidyl peptidase 4 99.4 2.1E-12 7.3E-17 139.7 19.4 211 257-477 17-332 (740)
164 3pe7_A Oligogalacturonate lyas 99.4 1.5E-11 5.3E-16 121.8 23.8 167 277-482 168-370 (388)
165 3e5z_A Putative gluconolactona 99.4 1.7E-10 5.7E-15 110.0 29.6 226 249-486 20-280 (296)
166 3azo_A Aminopeptidase; POP fam 99.4 1.3E-11 4.3E-16 131.8 23.2 190 255-484 128-357 (662)
167 4a5s_A Dipeptidyl peptidase 4 99.4 1.2E-11 4.1E-16 133.8 22.6 239 224-483 92-383 (740)
168 3fvz_A Peptidyl-glycine alpha- 99.4 1.3E-10 4.4E-15 112.8 26.9 219 257-485 24-313 (329)
169 1jof_A Carboxy-CIS,CIS-muconat 99.4 2.1E-10 7.1E-15 113.0 28.6 168 255-454 143-343 (365)
170 1xip_A Nucleoporin NUP159; bet 99.4 1.1E-11 3.8E-16 121.5 18.2 173 258-483 39-233 (388)
171 2dg1_A DRP35, lactonase; beta 99.4 1E-09 3.4E-14 106.3 30.5 225 249-483 37-300 (333)
172 1q7f_A NHL, brain tumor CG1071 99.4 9.3E-10 3.2E-14 104.1 29.0 214 254-482 27-269 (286)
173 3pe7_A Oligogalacturonate lyas 99.4 4.3E-11 1.5E-15 118.6 20.2 189 249-477 23-251 (388)
174 2xdw_A Prolyl endopeptidase; a 99.3 4.2E-10 1.4E-14 121.1 28.8 220 254-475 122-391 (710)
175 3no2_A Uncharacterized protein 99.3 5.9E-10 2E-14 105.1 24.6 184 258-481 38-230 (276)
176 3c5m_A Oligogalacturonate lyas 99.3 2E-10 6.7E-15 113.9 20.1 172 262-479 147-366 (396)
177 2gop_A Trilobed protease; beta 99.3 4.7E-10 1.6E-14 109.2 21.8 205 257-483 59-320 (347)
178 3c5m_A Oligogalacturonate lyas 99.2 2.7E-10 9.2E-15 112.9 19.4 211 259-481 38-300 (396)
179 3azo_A Aminopeptidase; POP fam 99.2 2.4E-10 8.3E-15 121.8 19.5 192 251-484 18-262 (662)
180 3g4e_A Regucalcin; six bladed 99.2 9.4E-09 3.2E-13 97.9 25.9 190 255-484 52-263 (297)
181 1q7f_A NHL, brain tumor CG1071 99.2 3.6E-09 1.2E-13 100.0 22.7 188 254-454 74-282 (286)
182 1rwi_B Serine/threonine-protei 99.2 1.1E-08 3.9E-13 95.5 24.3 217 258-484 25-254 (270)
183 2bkl_A Prolyl endopeptidase; m 99.1 2.1E-09 7.2E-14 115.3 21.6 216 254-475 118-374 (695)
184 3fvz_A Peptidyl-glycine alpha- 99.1 3E-08 1E-12 96.0 25.3 165 254-452 140-322 (329)
185 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 7.4E-08 2.5E-12 92.0 27.8 221 253-483 14-288 (314)
186 3dsm_A Uncharacterized protein 99.1 4.3E-08 1.5E-12 94.8 25.1 205 223-485 63-289 (328)
187 3dsm_A Uncharacterized protein 99.1 2.2E-08 7.7E-13 96.8 22.3 190 257-486 44-247 (328)
188 3no2_A Uncharacterized protein 99.0 2.4E-08 8.2E-13 94.0 21.2 172 267-484 4-185 (276)
189 2oiz_A Aromatic amine dehydrog 99.0 4.9E-08 1.7E-12 95.8 24.2 201 276-483 30-324 (361)
190 2z2n_A Virginiamycin B lyase; 99.0 4E-07 1.4E-11 86.0 29.8 216 252-481 10-242 (299)
191 2xdw_A Prolyl endopeptidase; a 99.0 4.7E-08 1.6E-12 105.1 25.9 160 255-454 231-416 (710)
192 2bkl_A Prolyl endopeptidase; m 99.0 4E-08 1.4E-12 105.3 25.2 163 253-455 223-400 (695)
193 2ghs_A AGR_C_1268P; regucalcin 99.0 1.9E-07 6.6E-12 90.1 27.7 185 256-484 89-293 (326)
194 1yr2_A Prolyl oligopeptidase; 99.0 2.6E-08 8.8E-13 107.6 22.2 186 255-481 161-380 (741)
195 2gop_A Trilobed protease; beta 99.0 9.7E-08 3.3E-12 92.7 23.9 198 257-482 15-280 (347)
196 1qks_A Cytochrome CD1 nitrite 99.0 5.6E-07 1.9E-11 93.3 30.8 241 222-481 175-458 (567)
197 2z2n_A Virginiamycin B lyase; 99.0 1.7E-06 5.8E-11 81.6 30.7 213 255-482 55-284 (299)
198 3hrp_A Uncharacterized protein 98.9 6.3E-07 2.2E-11 89.3 26.8 222 257-484 131-400 (409)
199 3e5z_A Putative gluconolactona 98.9 4.5E-07 1.5E-11 86.0 24.5 189 252-455 64-289 (296)
200 1rwi_B Serine/threonine-protei 98.9 1.9E-07 6.4E-12 87.1 20.3 189 257-455 67-267 (270)
201 3iuj_A Prolyl endopeptidase; h 98.9 2.8E-07 9.6E-12 98.6 23.9 213 254-474 126-381 (693)
202 1qks_A Cytochrome CD1 nitrite 98.9 1.1E-06 3.6E-11 91.2 27.0 206 267-482 166-408 (567)
203 3dr2_A Exported gluconolactona 98.8 7.5E-07 2.6E-11 85.0 23.2 221 249-511 37-303 (305)
204 2qc5_A Streptogramin B lactona 98.8 9.4E-06 3.2E-10 76.4 30.0 215 254-482 17-248 (300)
205 2dg1_A DRP35, lactonase; beta 98.8 8.9E-08 3E-12 92.4 15.5 179 258-481 7-200 (333)
206 2qc5_A Streptogramin B lactona 98.8 1.1E-05 3.6E-10 76.1 29.6 213 255-482 60-290 (300)
207 2mad_H Methylamine dehydrogena 98.8 1.5E-05 5E-10 78.3 31.4 212 261-481 70-337 (373)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 2E-06 6.7E-11 82.0 23.6 187 255-452 69-299 (314)
209 2qe8_A Uncharacterized protein 98.7 1.3E-06 4.3E-11 85.0 22.2 215 254-484 64-311 (343)
210 3dr2_A Exported gluconolactona 98.7 1.6E-06 5.5E-11 82.6 22.3 187 252-486 81-300 (305)
211 1xip_A Nucleoporin NUP159; bet 98.7 1.3E-07 4.5E-12 92.6 14.1 147 298-486 39-185 (388)
212 3sjl_D Methylamine dehydrogena 98.7 4.5E-06 1.5E-10 81.4 24.7 230 223-474 58-384 (386)
213 1yr2_A Prolyl oligopeptidase; 98.7 1.7E-06 5.8E-11 93.4 21.7 176 259-475 211-418 (741)
214 3g4e_A Regucalcin; six bladed 98.6 1.5E-05 5.2E-10 75.5 25.5 188 255-482 11-217 (297)
215 2iwa_A Glutamine cyclotransfer 98.6 1.4E-05 4.9E-10 73.7 23.7 185 259-486 23-229 (266)
216 2hz6_A Endoplasmic reticulum t 98.6 5.3E-08 1.8E-12 95.8 7.1 193 267-477 8-217 (369)
217 3nol_A Glutamine cyclotransfer 98.6 1.9E-05 6.6E-10 72.0 23.2 185 254-482 38-244 (262)
218 2ghs_A AGR_C_1268P; regucalcin 98.5 6.4E-05 2.2E-09 72.2 26.9 181 258-481 50-247 (326)
219 3c75_H MADH, methylamine dehyd 98.5 2E-05 6.9E-10 78.2 21.8 236 224-482 99-390 (426)
220 3mbr_X Glutamine cyclotransfer 98.4 0.00013 4.5E-09 65.9 24.4 185 254-482 16-223 (243)
221 3hrp_A Uncharacterized protein 98.4 4.1E-05 1.4E-09 76.1 23.1 166 255-450 217-408 (409)
222 1mda_H Methylamine dehydrogena 98.4 6.9E-05 2.4E-09 73.0 24.0 205 261-473 69-366 (368)
223 3iuj_A Prolyl endopeptidase; h 98.4 4.7E-05 1.6E-09 81.3 24.5 158 255-455 232-408 (693)
224 2mad_H Methylamine dehydrogena 98.4 0.0001 3.5E-09 72.3 24.1 188 259-459 127-357 (373)
225 3nok_A Glutaminyl cyclase; bet 98.3 8.9E-05 3E-09 67.7 20.8 184 254-482 50-254 (268)
226 2ece_A 462AA long hypothetical 98.3 5.1E-05 1.8E-09 74.7 19.1 187 258-481 139-399 (462)
227 1yiq_A Quinohemoprotein alcoho 98.2 9.8E-05 3.4E-09 78.6 22.3 207 261-478 239-532 (689)
228 2qe8_A Uncharacterized protein 98.2 4.7E-05 1.6E-09 73.8 16.5 192 257-482 17-266 (343)
229 3sjl_D Methylamine dehydrogena 98.1 0.00012 4E-09 71.4 17.6 156 263-456 39-213 (386)
230 1kb0_A Quinohemoprotein alcoho 98.1 0.00021 7.3E-09 75.8 20.7 207 260-477 246-533 (677)
231 1fwx_A Nitrous oxide reductase 98.0 0.0001 3.5E-09 75.2 15.6 212 258-485 135-409 (595)
232 3c75_H MADH, methylamine dehyd 98.0 0.00055 1.9E-08 67.8 20.5 192 259-459 179-409 (426)
233 2ece_A 462AA long hypothetical 98.0 0.0042 1.4E-07 61.2 26.2 182 266-484 93-342 (462)
234 3qqz_A Putative uncharacterize 98.0 0.0089 3E-07 54.6 26.9 204 251-486 21-246 (255)
235 3hxj_A Pyrrolo-quinoline quino 98.0 0.00015 5E-09 69.3 15.8 178 257-484 137-315 (330)
236 3hxj_A Pyrrolo-quinoline quino 98.0 0.00042 1.4E-08 66.0 18.6 195 267-511 107-320 (330)
237 1mda_H Methylamine dehydrogena 97.9 0.00028 9.7E-09 68.6 16.9 54 278-332 47-110 (368)
238 1fwx_A Nitrous oxide reductase 97.9 0.00068 2.3E-08 69.2 19.0 206 266-486 99-353 (595)
239 1npe_A Nidogen, entactin; glyc 97.8 0.018 6.1E-07 53.0 27.2 210 257-476 36-263 (267)
240 2p4o_A Hypothetical protein; p 97.8 0.012 4E-07 55.6 26.1 220 257-486 32-281 (306)
241 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.0011 3.9E-08 64.6 19.4 145 270-461 190-346 (376)
242 4a2l_A BT_4663, two-component 97.8 0.043 1.5E-06 59.3 33.1 221 256-486 214-474 (795)
243 1kb0_A Quinohemoprotein alcoho 97.8 0.0015 5E-08 69.3 20.6 56 276-331 189-296 (677)
244 2fp8_A Strictosidine synthase; 97.7 0.0045 1.5E-07 58.9 21.5 182 257-481 80-300 (322)
245 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.0087 3E-07 58.2 23.9 203 267-485 53-289 (376)
246 1npe_A Nidogen, entactin; glyc 97.7 0.013 4.4E-07 53.9 23.5 173 269-484 2-188 (267)
247 2iwa_A Glutamine cyclotransfer 97.7 0.0023 8E-08 58.9 17.7 151 289-483 11-170 (266)
248 4a2l_A BT_4663, two-component 97.7 0.045 1.5E-06 59.1 30.7 219 256-486 356-608 (795)
249 2xe4_A Oligopeptidase B; hydro 97.6 0.0026 8.8E-08 68.4 19.1 157 258-452 175-354 (751)
250 1ijq_A LDL receptor, low-densi 97.5 0.039 1.3E-06 52.3 24.4 172 270-483 3-184 (316)
251 1kv9_A Type II quinohemoprotei 97.5 0.0089 3E-07 63.2 21.7 71 261-331 234-337 (668)
252 2fp8_A Strictosidine synthase; 97.5 0.017 5.8E-07 54.9 21.8 186 258-483 20-248 (322)
253 1flg_A Protein (quinoprotein e 97.5 0.0077 2.6E-07 62.5 20.6 78 396-478 465-543 (582)
254 3nol_A Glutamine cyclotransfer 97.5 0.0064 2.2E-07 55.4 17.5 146 289-482 33-189 (262)
255 3v64_C Agrin; beta propeller, 97.5 0.076 2.6E-06 51.1 26.5 183 259-484 36-224 (349)
256 2ad6_A Methanol dehydrogenase 97.5 0.0084 2.9E-07 62.1 20.9 80 396-480 443-523 (571)
257 3nok_A Glutaminyl cyclase; bet 97.4 0.011 3.6E-07 54.0 17.9 146 289-481 45-197 (268)
258 3v65_B Low-density lipoprotein 97.4 0.069 2.4E-06 52.2 25.4 181 261-484 81-267 (386)
259 3mbr_X Glutamine cyclotransfer 97.4 0.014 4.8E-07 52.6 18.5 145 289-481 11-166 (243)
260 1yiq_A Quinohemoprotein alcoho 97.4 0.016 5.4E-07 61.5 21.7 57 276-332 182-289 (689)
261 1w6s_A Methanol dehydrogenase 97.2 0.039 1.3E-06 57.2 21.1 54 278-332 279-347 (599)
262 3p5b_L Low density lipoprotein 97.2 0.14 4.9E-06 50.2 24.4 177 269-483 84-266 (400)
263 3v9f_A Two-component system se 97.1 0.38 1.3E-05 51.6 29.5 220 256-486 257-518 (781)
264 2xe4_A Oligopeptidase B; hydro 97.1 0.014 4.6E-07 62.8 17.8 146 298-483 175-339 (751)
265 2hz6_A Endoplasmic reticulum t 97.1 5.8E-05 2E-09 73.9 -0.7 115 307-463 8-122 (369)
266 2p9w_A MAL S 1 allergenic prot 97.1 0.059 2E-06 50.8 19.2 168 257-453 13-216 (334)
267 1k3i_A Galactose oxidase precu 97.0 0.044 1.5E-06 57.8 20.7 71 261-331 190-278 (656)
268 3v65_B Low-density lipoprotein 97.0 0.3 1E-05 47.6 25.1 182 257-481 116-305 (386)
269 3v9f_A Two-component system se 97.0 0.24 8.2E-06 53.3 26.2 185 257-485 363-560 (781)
270 3v64_C Agrin; beta propeller, 96.9 0.33 1.1E-05 46.6 26.0 182 257-481 73-262 (349)
271 3sov_A LRP-6, low-density lipo 96.8 0.34 1.2E-05 45.7 23.0 173 270-483 6-186 (318)
272 3tc9_A Hypothetical hydrolase; 96.8 0.054 1.8E-06 53.8 17.8 152 258-452 138-301 (430)
273 3pbp_A Nucleoporin NUP82; beta 96.8 0.12 4.1E-06 50.3 19.2 162 264-448 28-208 (452)
274 4hw6_A Hypothetical protein, I 96.8 0.17 6E-06 50.1 21.3 153 258-451 140-303 (433)
275 3amr_A 3-phytase; beta-propell 96.6 0.35 1.2E-05 45.9 21.1 180 270-484 43-253 (355)
276 4hw6_A Hypothetical protein, I 96.6 0.62 2.1E-05 46.1 24.2 200 249-484 174-423 (433)
277 1bpo_A Protein (clathrin); cla 96.6 0.6 2.1E-05 45.6 26.6 229 225-474 49-311 (494)
278 2ad6_A Methanol dehydrogenase 96.5 0.22 7.4E-06 51.4 20.6 20 276-295 175-194 (571)
279 3m0c_C LDL receptor, low-densi 96.5 0.43 1.5E-05 51.1 23.3 175 270-483 397-578 (791)
280 1w6s_A Methanol dehydrogenase 96.3 0.19 6.5E-06 52.1 18.3 56 276-331 181-291 (599)
281 3qqz_A Putative uncharacterize 96.2 0.54 1.9E-05 42.7 18.9 70 257-326 70-150 (255)
282 1kv9_A Type II quinohemoprotei 96.0 0.13 4.4E-06 54.3 16.1 179 268-459 118-340 (668)
283 3tc9_A Hypothetical hydrolase; 96.0 0.27 9.2E-06 48.7 17.5 143 298-484 138-291 (430)
284 3amr_A 3-phytase; beta-propell 96.0 1.2 4E-05 42.4 21.1 192 222-460 48-272 (355)
285 1flg_A Protein (quinoprotein e 95.8 0.68 2.3E-05 47.8 20.2 20 442-461 465-484 (582)
286 2vpj_A Kelch-like protein 12; 95.8 0.81 2.8E-05 42.4 19.0 184 267-458 14-237 (301)
287 2xbg_A YCF48-like protein; pho 95.7 1.2 4.3E-05 41.9 20.3 183 257-484 122-313 (327)
288 1tl2_A L10, protein (tachylect 95.7 0.15 5.1E-06 44.9 12.2 66 258-326 42-115 (236)
289 1n7d_A LDL receptor, low-densi 95.4 0.035 1.2E-06 59.0 8.5 172 271-484 380-561 (699)
290 3p5b_L Low density lipoprotein 95.3 2.4 8.2E-05 41.3 28.8 211 255-473 110-342 (400)
291 2xn4_A Kelch-like protein 2; s 95.2 1.2 4.2E-05 41.1 17.9 173 278-458 31-235 (302)
292 2p9w_A MAL S 1 allergenic prot 95.2 1 3.4E-05 42.4 16.7 150 299-483 15-204 (334)
293 1zgk_A Kelch-like ECH-associat 95.0 1.2 4.1E-05 41.5 17.5 183 267-457 24-245 (308)
294 1k3i_A Galactose oxidase precu 95.0 0.39 1.3E-05 50.4 15.4 121 300-457 189-328 (656)
295 1ijq_A LDL receptor, low-densi 94.9 2.5 8.4E-05 39.6 26.3 183 257-482 30-226 (316)
296 3sov_A LRP-6, low-density lipo 94.9 2.6 8.7E-05 39.6 26.1 179 257-477 35-222 (318)
297 2xn4_A Kelch-like protein 2; s 94.7 1.6 5.3E-05 40.5 17.3 182 267-456 61-280 (302)
298 3ii7_A Kelch-like protein 7; p 94.7 2.7 9.3E-05 38.8 20.7 181 267-455 55-275 (306)
299 3kya_A Putative phosphatase; s 94.6 2 6.9E-05 43.0 18.3 159 258-450 140-339 (496)
300 1zgk_A Kelch-like ECH-associat 94.0 1.1 3.9E-05 41.6 14.6 171 278-456 91-291 (308)
301 2vpj_A Kelch-like protein 12; 93.9 1.1 3.9E-05 41.3 14.4 147 267-455 112-281 (301)
302 1n7d_A LDL receptor, low-densi 93.9 0.28 9.6E-06 51.9 11.0 169 259-470 455-632 (699)
303 3kya_A Putative phosphatase; s 93.9 2.6 9E-05 42.2 17.4 146 298-482 140-329 (496)
304 1tl2_A L10, protein (tachylect 93.8 3.2 0.00011 36.5 15.8 176 297-510 41-233 (236)
305 2p4o_A Hypothetical protein; p 93.6 4.5 0.00015 37.4 25.7 181 257-443 72-279 (306)
306 4asc_A Kelch repeat and BTB do 93.5 3.7 0.00013 38.1 17.3 69 386-458 148-227 (315)
307 2ism_A Putative oxidoreductase 93.4 5.6 0.00019 37.8 24.8 70 256-327 30-114 (352)
308 2xzh_A Clathrin heavy chain 1; 93.4 1.6 5.5E-05 40.9 13.6 138 278-462 50-198 (365)
309 1cru_A Protein (soluble quinop 93.3 3 0.0001 41.3 16.8 32 297-328 27-58 (454)
310 3s94_A LRP-6, low-density lipo 93.1 9.3 0.00032 39.5 23.9 182 257-481 40-230 (619)
311 1xi4_A Clathrin heavy chain; a 93.1 13 0.00043 42.2 22.1 228 225-473 49-310 (1630)
312 3a9g_A Putative uncharacterize 93.0 4.9 0.00017 38.3 17.4 71 257-328 29-115 (354)
313 2xzh_A Clathrin heavy chain 1; 93.0 5.9 0.0002 37.1 31.0 229 225-474 50-312 (365)
314 4a0p_A LRP6, LRP-6, low-densit 93.0 9.6 0.00033 39.5 24.4 172 269-483 7-186 (628)
315 3pbp_A Nucleoporin NUP82; beta 92.9 2.4 8.1E-05 41.3 14.6 73 258-330 67-161 (452)
316 3ii7_A Kelch-like protein 7; p 92.8 5.8 0.0002 36.5 18.9 181 269-457 13-230 (306)
317 3m0c_C LDL receptor, low-densi 92.6 13 0.00043 39.8 28.4 185 254-481 421-619 (791)
318 2woz_A Kelch repeat and BTB do 92.5 6.3 0.00022 36.6 17.3 185 266-458 55-293 (318)
319 1cru_A Protein (soluble quinop 92.3 9.5 0.00033 37.7 18.9 52 256-307 26-87 (454)
320 3das_A Putative oxidoreductase 92.2 2.7 9.3E-05 39.9 14.0 33 297-329 32-64 (347)
321 3a9g_A Putative uncharacterize 92.0 2.9 9.8E-05 39.9 14.2 28 297-325 29-56 (354)
322 2uvk_A YJHT; unknown function, 91.8 3.4 0.00012 39.2 14.6 57 398-458 286-348 (357)
323 2xbg_A YCF48-like protein; pho 91.7 8.7 0.0003 36.0 28.1 215 257-481 36-267 (327)
324 3sre_A PON1, serum paraoxonase 91.5 9.9 0.00034 36.2 23.1 55 427-482 226-285 (355)
325 3sre_A PON1, serum paraoxonase 91.2 7.8 0.00027 36.9 16.1 84 396-483 138-241 (355)
326 2g8s_A Glucose/sorbosone dehyd 91.0 3 0.0001 39.8 13.3 30 297-326 18-47 (353)
327 2ism_A Putative oxidoreductase 90.8 3.7 0.00013 39.1 13.7 27 297-324 31-57 (352)
328 4asc_A Kelch repeat and BTB do 90.7 4.5 0.00015 37.6 14.0 63 267-330 98-177 (315)
329 3ei3_A DNA damage-binding prot 90.5 26 0.00087 39.3 25.0 61 269-329 524-593 (1158)
330 3ei3_A DNA damage-binding prot 89.3 31 0.0011 38.5 28.8 67 387-456 571-642 (1158)
331 3das_A Putative oxidoreductase 89.3 15 0.00051 34.8 19.4 76 252-327 27-116 (347)
332 4a0p_A LRP6, LRP-6, low-densit 88.8 24 0.00082 36.5 28.3 182 257-482 37-225 (628)
333 3sbq_A Nitrous-oxide reductase 87.1 5.7 0.00019 40.1 11.9 150 278-453 299-479 (638)
334 2g8s_A Glucose/sorbosone dehyd 87.1 11 0.00037 35.8 14.0 50 257-307 18-76 (353)
335 2zwa_A Leucine carboxyl methyl 83.6 13 0.00045 39.0 13.7 151 266-454 396-579 (695)
336 2uvk_A YJHT; unknown function, 82.6 26 0.00089 32.8 14.5 65 267-332 19-100 (357)
337 2be1_A Serine/threonine-protei 80.1 4.1 0.00014 38.6 7.4 63 267-329 10-78 (339)
338 2zwa_A Leucine carboxyl methyl 80.0 31 0.0011 36.1 15.0 65 267-331 451-526 (695)
339 3s25_A Hypothetical 7-bladed b 79.8 38 0.0013 31.2 17.5 69 382-459 110-183 (302)
340 3s94_A LRP-6, low-density lipo 76.8 72 0.0024 32.8 29.5 183 257-482 349-539 (619)
341 2be1_A Serine/threonine-protei 75.9 5.5 0.00019 37.7 6.9 30 432-461 110-139 (339)
342 2wg3_C Hedgehog-interacting pr 74.9 20 0.00068 35.5 11.0 30 297-326 14-44 (463)
343 2woz_A Kelch repeat and BTB do 74.5 52 0.0018 30.1 19.4 69 386-458 109-190 (318)
344 3ott_A Two-component system se 73.8 93 0.0032 32.7 27.6 71 257-329 146-222 (758)
345 4gq2_M Nucleoporin NUP120; bet 72.7 17 0.00059 39.7 10.9 37 423-459 237-273 (950)
346 1xi4_A Clathrin heavy chain; a 71.6 15 0.00051 41.6 9.8 130 278-453 49-189 (1630)
347 3ott_A Two-component system se 68.9 1.2E+02 0.004 31.9 23.3 185 257-486 63-254 (758)
348 3sbq_A Nitrous-oxide reductase 64.1 1.3E+02 0.0044 30.5 15.8 87 374-464 322-430 (638)
349 4fhn_B Nucleoporin NUP120; pro 60.0 18 0.00063 40.4 8.1 33 427-459 243-275 (1139)
350 1bpo_A Protein (clathrin); cla 54.9 1.6E+02 0.0056 28.8 21.7 166 257-452 151-331 (494)
351 3f7f_A Nucleoporin NUP120; nuc 51.0 16 0.00055 38.1 5.1 31 431-461 229-259 (729)
352 1dtk_A Dendrotoxin K; presynap 50.3 2.6 8.9E-05 28.0 -0.5 17 4-20 17-33 (57)
353 3hx6_A Type 4 fimbrial biogene 50.0 81 0.0028 31.8 9.9 184 122-329 84-286 (570)
354 2kcr_A Anntoxin; protein; NMR 48.2 4.7 0.00016 27.2 0.5 17 4-20 19-35 (61)
355 1xu1_R Tumor necrosis factor r 47.7 4.8 0.00016 24.4 0.4 13 6-18 8-20 (42)
356 1y62_A Conkunitzin-S1; alpha h 46.2 3.3 0.00011 27.8 -0.5 17 4-20 19-35 (60)
357 1irh_A Tissue factor pathway i 45.5 5.7 0.0002 26.7 0.6 17 4-20 20-36 (61)
358 1kth_A Collagen alpha 3(VI) ch 44.9 3.5 0.00012 27.5 -0.5 17 4-20 17-33 (58)
359 3byb_A Textilinin, textilinin- 44.8 3.6 0.00012 27.5 -0.5 17 4-20 19-35 (59)
360 3s25_A Hypothetical 7-bladed b 44.7 1.8E+02 0.0063 26.4 17.1 137 263-453 110-256 (302)
361 1g6x_A Pancreatic trypsin inhi 44.7 3.6 0.00012 27.4 -0.5 17 4-20 17-33 (58)
362 1dtx_A Alpha-dendrotoxin; pres 42.7 4 0.00014 27.3 -0.5 17 4-20 19-35 (59)
363 1jc6_A Venom basic protease in 42.6 6.5 0.00022 26.9 0.5 18 4-21 19-36 (65)
364 3aub_A BPTI, bovine pancreatic 42.6 4 0.00014 27.2 -0.5 17 4-20 17-33 (58)
365 1bun_B BETA2-bungarotoxin; hyd 42.2 4.1 0.00014 27.4 -0.5 17 4-20 19-35 (61)
366 4a9v_A PHOX; hydrolase, beta-p 41.5 1.1E+02 0.0039 30.9 9.4 59 257-315 476-549 (592)
367 1bf0_A Calcicludine; calcium c 41.4 4.3 0.00015 27.2 -0.5 17 4-20 19-35 (60)
368 1aap_A Alzheimer'S disease amy 39.0 5 0.00017 26.7 -0.5 16 5-20 18-33 (58)
369 3m7q_B Kunitz-type proteinase 38.9 5 0.00017 27.0 -0.5 15 5-19 20-34 (61)
370 1yc0_I Kunitz-type protease in 38.8 5.1 0.00017 28.4 -0.5 17 4-20 34-50 (75)
371 1zr0_B TFPI-2, tissue factor p 38.8 5.1 0.00017 27.2 -0.5 17 4-20 21-37 (63)
372 3zwu_A Alkaline phosphatase PH 36.7 95 0.0032 31.7 8.2 57 258-314 477-548 (592)
373 1adz_A TFPI, EPI, LACI, tissue 36.4 9.2 0.00031 26.7 0.5 17 4-20 26-42 (71)
374 3zwu_A Alkaline phosphatase PH 35.0 1.1E+02 0.0038 31.1 8.5 58 427-484 481-552 (592)
375 1co7_I BPTI, bovine pancreatic 32.5 6.9 0.00024 29.4 -0.8 17 4-20 51-67 (99)
376 3aug_A BPTI, bovine pancreatic 32.5 7.4 0.00025 26.6 -0.5 17 4-20 17-33 (65)
377 4dtg_K Tissue factor pathway i 31.9 7.6 0.00026 26.6 -0.5 16 5-20 20-35 (66)
378 2ddi_A WAP, follistatin/kazal, 31.9 7.6 0.00026 27.0 -0.5 16 5-20 23-38 (70)
379 1m5a_B Insulin B chain; alpha 30.4 13 0.00046 20.8 0.4 7 7-13 23-29 (30)
380 2wg3_C Hedgehog-interacting pr 29.7 4E+02 0.014 25.9 13.5 51 257-307 14-79 (463)
381 4a9v_A PHOX; hydrolase, beta-p 29.5 1.8E+02 0.0062 29.5 8.6 59 426-484 480-552 (592)
382 4rxn_A Rubredoxin; electron tr 27.1 17 0.00059 23.7 0.6 10 6-15 9-18 (54)
383 6rxn_A Rubredoxin; electron tr 26.4 17 0.00059 22.8 0.4 11 6-16 10-20 (46)
384 3kvp_A Uncharacterized protein 25.8 17 0.00057 24.7 0.3 9 8-16 43-51 (72)
385 3q6k_A 43.2 kDa salivary prote 25.0 4.5E+02 0.015 24.9 26.0 185 278-483 124-343 (381)
386 1e8j_A Rubredoxin; iron-sulfur 23.8 22 0.00076 22.9 0.6 10 6-15 9-18 (52)
387 3mez_A Mannose-specific lectin 22.7 2.4E+02 0.0083 21.0 7.3 55 259-324 21-75 (111)
388 4gq2_M Nucleoporin NUP120; bet 21.8 97 0.0033 33.7 5.6 35 298-332 237-271 (950)
389 1yk4_A Rubredoxin, RD; electro 20.7 27 0.00091 22.6 0.5 9 7-15 9-17 (52)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=271.99 Aligned_cols=271 Identities=15% Similarity=0.213 Sum_probs=210.9
Q ss_pred eCCCCceeeeeEEeccccCeEEEEEeecccccccceeEEeeeccccccccccccccCCCCCccccCcceeeecccceEEE
Q 037288 115 QTPEGQFRTDVLLTGSVNGFFSLFEVGNVGQHAHDTVKFIPSCVWPRIKDNKTESSKAPEHIWRLNKASILMPSSVSCIK 194 (513)
Q Consensus 115 ~~~~g~~~~~~l~tg~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~s~i~si~ 194 (513)
.+|++....++|++|+.||.|++|++...... +.+. - -.+...|.++.
T Consensus 40 ~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~----~~~~----------l------------------~gh~~~v~~~~ 87 (321)
T 3ow8_A 40 WGTNKKENSETVVTGSLDDLVKVWKWRDERLD----LQWS----------L------------------EGHQLGVVSVD 87 (321)
T ss_dssp EC-------CEEEEEETTSCEEEEEEETTEEE----EEEE----------E------------------CCCSSCEEEEE
T ss_pred EecCCCCCCCEEEEEcCCCCEEEEECCCCCee----eeee----------e------------------ccCCCCEEEEE
Confidence 55665556778999999999999998543211 1111 0 01223344444
Q ss_pred ecCCCCccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEE
Q 037288 195 LFGKHPSCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIG 274 (513)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~ 274 (513)
+++... .+ ..+..+|.+.+|++.+.. .+..+..|...+++++|+|++++|++|
T Consensus 88 ~~~~~~----------~l-----~s~s~D~~i~lWd~~~~~------------~~~~~~~~~~~~~~~~~spdg~~l~~g 140 (321)
T 3ow8_A 88 ISHTLP----------IA-----ASSSLDAHIRLWDLENGK------------QIKSIDAGPVDAWTLAFSPDSQYLATG 140 (321)
T ss_dssp ECSSSS----------EE-----EEEETTSEEEEEETTTTE------------EEEEEECCTTCCCCEEECTTSSEEEEE
T ss_pred ECCCCC----------EE-----EEEeCCCcEEEEECCCCC------------EEEEEeCCCccEEEEEECCCCCEEEEE
Confidence 443321 11 123457888888876432 345577888999999999999999998
Q ss_pred eC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCe
Q 037288 275 TN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDR 352 (513)
Q Consensus 275 s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 352 (513)
+. +.|++||+.+++....+. +...|.+++|+|++++|++|+.||.|++||+++++. +..+.+|..+|.++
T Consensus 141 ~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l----- 212 (321)
T 3ow8_A 141 THVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL---LHTLEGHAMPIRSL----- 212 (321)
T ss_dssp CTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---EEEECCCSSCCCEE-----
T ss_pred cCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE---EEEEcccCCceeEE-----
Confidence 65 559999999998776665 566799999999999999999999999999998875 44778888888774
Q ss_pred EEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCC
Q 037288 353 VTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQS 432 (513)
Q Consensus 353 ~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~ 432 (513)
.|+|++++|++|+.|+.|++||++ ....+.++.+|...|.. ++|+|+
T Consensus 213 -----------------------------~~spd~~~l~s~s~dg~i~iwd~~--~~~~~~~~~~h~~~v~~--~~~sp~ 259 (321)
T 3ow8_A 213 -----------------------------TFSPDSQLLVTASDDGYIKIYDVQ--HANLAGTLSGHASWVLN--VAFCPD 259 (321)
T ss_dssp -----------------------------EECTTSCEEEEECTTSCEEEEETT--TCCEEEEECCCSSCEEE--EEECTT
T ss_pred -----------------------------EEcCCCCEEEEEcCCCeEEEEECC--CcceeEEEcCCCCceEE--EEECCC
Confidence 456799999999999999999997 55588899999999877 899999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCCe
Q 037288 433 ERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 433 g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
+++|++|+.|++|++||+.+++++..+..|...|.+++|+|++.++++++.|-
T Consensus 260 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~ 312 (321)
T 3ow8_A 260 DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQ 312 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 99999999999999999999999999999999999999999988888877763
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-31 Score=284.47 Aligned_cols=339 Identities=12% Similarity=0.106 Sum_probs=234.8
Q ss_pred eeeeeeCCCCceeeeeEEeccccCeEEEEEeecccccccceeEEeeeccccccccccccccCCCCCccccCcceeeeccc
Q 037288 110 IELNVQTPEGQFRTDVLLTGSVNGFFSLFEVGNVGQHAHDTVKFIPSCVWPRIKDNKTESSKAPEHIWRLNKASILMPSS 189 (513)
Q Consensus 110 ~~~~~~~~~g~~~~~~l~tg~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~s~ 189 (513)
+....++|+|. +|++|+.||.|+||++..........+. .+...+..+.|+|++..+...+.
T Consensus 62 v~~~~~spdg~----~lasg~~d~~v~lWd~~~~~~~~~~~~~--------------~~~~~v~~v~fs~dg~~l~~~~~ 123 (611)
T 1nr0_A 62 TTVAKTSPSGY----YCASGDVHGNVRIWDTTQTTHILKTTIP--------------VFSGPVKDISWDSESKRIAAVGE 123 (611)
T ss_dssp EEEEEECTTSS----EEEEEETTSEEEEEESSSTTCCEEEEEE--------------CSSSCEEEEEECTTSCEEEEEEC
T ss_pred eEEEEECCCCc----EEEEEeCCCCEEEeECCCCcceeeEeec--------------ccCCceEEEEECCCCCEEEEEEC
Confidence 34445788875 6999999999999998433211111111 11223666777776544332211
Q ss_pred ----ceEEEecCC------------CCccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEec
Q 037288 190 ----VSCIKLFGK------------HPSCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVA 253 (513)
Q Consensus 190 ----i~si~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (513)
...+.+... ...+..++|.....+ ..+..++.+.+|+... ......+.
T Consensus 124 ~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l----~s~s~D~~v~lwd~~~------------~~~~~~l~ 187 (611)
T 1nr0_A 124 GRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRI----ISGSDDNTVAIFEGPP------------FKFKSTFG 187 (611)
T ss_dssp CSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEE----EEEETTSCEEEEETTT------------BEEEEEEC
T ss_pred CCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEE----EEEeCCCeEEEEECCC------------CeEeeeec
Confidence 112222211 111222223222211 1234577777777542 22356789
Q ss_pred cccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEe--------eeCCCeEEEEEecCCcEEEEEeCCCeEEEEE
Q 037288 254 SFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVC--------RSKSDILAQQVIHSGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~--------~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd 324 (513)
+|...|++++|+|+|++|++|+ |++|++||+.+++....+ .|...|.+++|+|++++|++|+.|++|++||
T Consensus 188 ~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd 267 (611)
T 1nr0_A 188 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN 267 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 9999999999999999999886 456999999999887776 4788899999999999999999999999999
Q ss_pred CCCCccccc----------------------------------------cccccccCcCeEEEeeCC---eEEEeE----
Q 037288 325 VRKRQRGCS----------------------------------------SRAGRRHRIPYSRLQRND---RVTNEQ---- 357 (513)
Q Consensus 325 ~~~~~~~~~----------------------------------------~~~~~~h~~~v~~v~~~~---~~~s~~---- 357 (513)
+++++.... ...+.+|...|.+++|+| .+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~ 347 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGH 347 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCc
Confidence 987653211 124568999999999999 677776
Q ss_pred ---eecccCcccce------------------------------------------------------------------
Q 037288 358 ---WFELKANIWPS------------------------------------------------------------------ 368 (513)
Q Consensus 358 ---w~~~~~~~~~~------------------------------------------------------------------ 368 (513)
|+...+.....
T Consensus 348 v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~ 427 (611)
T 1nr0_A 348 INSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAV 427 (611)
T ss_dssp EEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEE
T ss_pred EEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEE
Confidence 88764422100
Q ss_pred ---------------eEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCC
Q 037288 369 ---------------HTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE 433 (513)
Q Consensus 369 ---------------~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g 433 (513)
..+.+...+.+ +.++|++++|++|+.|+.|++||+.......+.. .+|...|.. ++|+|+|
T Consensus 428 ~~~~~~v~~~~~~~~~~~~~~~~v~~-va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~--v~fspdg 503 (611)
T 1nr0_A 428 AACYKHIAIYSHGKLTEVPISYNSSC-VALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITS--VAFSNNG 503 (611)
T ss_dssp EEESSEEEEEETTEEEEEECSSCEEE-EEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEE--EEECTTS
T ss_pred EEeCceEEEEeCCceeeeecCCCceE-EEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEE--EEECCCC
Confidence 00001112333 5789999999999999999999996211112344 679988877 8999999
Q ss_pred CEEEEEeCCCcEEEEeCCC-CeEEEE--ecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 434 RFVMSGGEDCKLRIWSIRS-GELVFE--DKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 434 ~~l~sg~~Dg~v~vwd~~~-~~~~~~--~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
++|++++.|++|++||+.+ ++++.. +..|...|++++|+|++.++|+++.|-.
T Consensus 504 ~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~ 559 (611)
T 1nr0_A 504 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS 559 (611)
T ss_dssp SEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCc
Confidence 9999999999999999988 666554 3448899999999999999999887754
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.2e-31 Score=255.37 Aligned_cols=244 Identities=14% Similarity=0.126 Sum_probs=201.8
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCC-eEEEEECCCCcEEEEee-eCCCe
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNL-GAAMVDMETGMASWVCR-SKSDI 299 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~-~i~vwd~~~~~~~~~~~-~~~~V 299 (513)
.+|.+.+|++.+.. .+..+..|..+|.+++|+|++++|++|+++ .|++||+.+++.+..+. |...|
T Consensus 33 ~dg~v~lWd~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v 100 (304)
T 2ynn_A 33 YSGRVELWNYETQV------------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYI 100 (304)
T ss_dssp TTSEEEEEETTTTE------------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CCCcEEEEECCCCc------------eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcE
Confidence 57888888876432 345688999999999999999999988755 59999999999877665 78889
Q ss_pred EEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC----eEEEeE-------eecccCcccce
Q 037288 300 LAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKANIWPS 368 (513)
Q Consensus 300 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~~~~~ 368 (513)
.+++|+|++++|++|+.|++|++||++++... ...+.+|...|.+++|+| .+++++ |+.........
T Consensus 101 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 178 (304)
T 2ynn_A 101 RSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL--EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT 178 (304)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEGGGTTEE--EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEE
T ss_pred EEEEEcCCCCEEEEECCCCeEEEEECCCCcch--hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccce
Confidence 99999999999999999999999999876431 347889999999999997 577777 98876554322
Q ss_pred eEeecCCCceEEEEEc--CCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEE
Q 037288 369 HTTFMPSSISCLQSLQ--LYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446 (513)
Q Consensus 369 ~~~~~~~~v~~~~~~~--~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~ 446 (513)
....+...+..+ .+. +++.+|++|+.|+.|++||++ ...++.++.+|...+.. ++|+|++.+|++|+.||+|+
T Consensus 179 ~~~~~~~~v~~~-~~~~~~~~~~l~s~s~D~~i~iWd~~--~~~~~~~~~~h~~~v~~--~~~~p~~~~l~s~s~Dg~i~ 253 (304)
T 2ynn_A 179 LTTGQERGVNYV-DYYPLPDKPYMITASDDLTIKIWDYQ--TKSCVATLEGHMSNVSF--AVFHPTLPIIISGSEDGTLK 253 (304)
T ss_dssp EECCCTTCEEEE-EECCSTTCCEEEEEETTSEEEEEETT--TTEEEEEEECCSSCEEE--EEECSSSSEEEEEETTSCEE
T ss_pred eccCCcCcEEEE-EEEEcCCCCEEEEEcCCCeEEEEeCC--CCccceeeCCCCCCEEE--EEECCCCCEEEEEcCCCeEE
Confidence 222333455554 444 477899999999999999997 55689999999999877 88999999999999999999
Q ss_pred EEeCCCCeEEEEecCCCCCeEEEEEcCCC--ceEEeeCCC
Q 037288 447 IWSIRSGELVFEDKFSNSVPSAVCWRTQR--SMGPQIEGK 484 (513)
Q Consensus 447 vwd~~~~~~~~~~~~~~~~v~~v~~~p~~--~~~~t~~~~ 484 (513)
+||+.+++++..+..+...+.+++|+|++ .+++++..+
T Consensus 254 iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~ 293 (304)
T 2ynn_A 254 IWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN 293 (304)
T ss_dssp EEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT
T ss_pred EEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCC
Confidence 99999999999999998999999999984 246665544
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.1e-31 Score=260.52 Aligned_cols=214 Identities=14% Similarity=0.129 Sum_probs=178.5
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee-eCCCeE
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR-SKSDIL 300 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~-~~~~V~ 300 (513)
.+|.+.+|++.+..... .....+.+|...|.++.|++++.+++++.|+.|++||+.+++.+..+. |...|.
T Consensus 117 ~d~~v~iw~~~~~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~ 188 (340)
T 1got_B 117 LDNICSIYNLKTREGNV--------RVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM 188 (340)
T ss_dssp TTCEEEEEETTTCSBSC--------EEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCCeEEEEECccCCCcc--------eeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceE
Confidence 46788888876543211 124557899999999999998886656667789999999998877766 788899
Q ss_pred EEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEE
Q 037288 301 AQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCL 380 (513)
Q Consensus 301 ~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~ 380 (513)
+++|+|++++|++|+.|+.|++||++++.. ...+.+|...|.++
T Consensus 189 ~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~---~~~~~~h~~~v~~v--------------------------------- 232 (340)
T 1got_B 189 SLSLAPDTRLFVSGACDASAKLWDVREGMC---RQTFTGHESDINAI--------------------------------- 232 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCSE---EEEECCCSSCEEEE---------------------------------
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCee---EEEEcCCcCCEEEE---------------------------------
Confidence 999999999999999999999999998765 44778888888885
Q ss_pred EEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecC--CCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE
Q 037288 381 QSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEG--HVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFE 458 (513)
Q Consensus 381 ~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~--h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~ 458 (513)
.|+|++++|++|+.||.|++||++ ....+..+.. +...+.. ++|+|+|++|++|+.||.|++||+.+++.+..
T Consensus 233 -~~~p~~~~l~s~s~d~~v~iwd~~--~~~~~~~~~~~~~~~~v~~--~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~ 307 (340)
T 1got_B 233 -CFFPNGNAFATGSDDATCRLFDLR--ADQELMTYSHDNIICGITS--VSFSKSGRLLLAGYDDFNCNVWDALKADRAGV 307 (340)
T ss_dssp -EECTTSSEEEEEETTSCEEEEETT--TTEEEEEECCTTCCSCEEE--EEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -EEcCCCCEEEEEcCCCcEEEEECC--CCcEEEEEccCCcccceEE--EEECCCCCEEEEECCCCeEEEEEcccCcEeeE
Confidence 456699999999999999999997 4445666642 2235555 89999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 459 DKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 459 ~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+..|..+|.+++|+|++.++++++.|
T Consensus 308 ~~~h~~~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 308 LAGHDNRVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETT
T ss_pred eecCCCcEEEEEEcCCCCEEEEEcCC
Confidence 99999999999999998888887766
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-31 Score=266.90 Aligned_cols=263 Identities=13% Similarity=0.130 Sum_probs=218.4
Q ss_pred ecccceEEEecCCCCccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEc
Q 037288 186 MPSSVSCIKLFGKHPSCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFC 265 (513)
Q Consensus 186 ~~s~i~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s 265 (513)
+...|+++.+++.. ..+ ..+..+|.+.+|++.+... ...+.+|...|.+++|+
T Consensus 107 h~~~V~~~~~~p~~----------~~l-----~s~s~Dg~i~vwd~~~~~~------------~~~l~~h~~~V~~v~~~ 159 (410)
T 1vyh_C 107 HRSPVTRVIFHPVF----------SVM-----VSASEDATIKVWDYETGDF------------ERTLKGHTDSVQDISFD 159 (410)
T ss_dssp CSSCEEEEEECSSS----------SEE-----EEEESSSCEEEEETTTCCC------------CEEECCCSSCEEEEEEC
T ss_pred cCCcEEEEEEcCCC----------CEE-----EEEeCCCeEEEEECCCCcE------------EEEEeccCCcEEEEEEc
Confidence 45677787776544 222 1234588899998875432 35688999999999999
Q ss_pred CCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcC
Q 037288 266 TNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIP 343 (513)
Q Consensus 266 ~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 343 (513)
|++.+|++|+. ++|++||+.+++++..+. |...|.+++|+|++++|++|+.|++|++||++++.. +..+.+|...
T Consensus 160 ~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~---~~~~~~h~~~ 236 (410)
T 1vyh_C 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC---VKTFTGHREW 236 (410)
T ss_dssp TTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE---EEEEECCSSC
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE---EEEEeCCCcc
Confidence 99999998865 559999999998877665 788899999999999999999999999999998875 4588999999
Q ss_pred eEEEeeCC---eEEEeE-------eecccCcccceeEe-ecCCCceEEEEEcCC--------------------CCEEEE
Q 037288 344 YSRLQRND---RVTNEQ-------WFELKANIWPSHTT-FMPSSISCLQSLQLY--------------------DQYFLA 392 (513)
Q Consensus 344 v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~-~~~~~v~~~~~~~~~--------------------~~~l~s 392 (513)
|.++.+++ .+++++ |+...+... ..+ .+...+.++ .|+|+ +.+|++
T Consensus 237 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~--~~~~~h~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s 313 (410)
T 1vyh_C 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECK--AELREHRHVVECI-SWAPESSYSSISEATGSETKKSGKPGPFLLS 313 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEECCCSSCEEEE-EECCSCGGGGGGGCCSCC-------CCEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcee--eEecCCCceEEEE-EEcCcccccchhhhccccccccCCCCCEEEE
Confidence 99999998 677776 988776543 233 344556665 66665 679999
Q ss_pred EecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEc
Q 037288 393 SSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWR 472 (513)
Q Consensus 393 ~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~ 472 (513)
|+.|+.|++||++ ...++.++.+|.+.|.. ++|+|+|++|++|+.||+|++||+.+++++..+..|...|++++|+
T Consensus 314 gs~D~~i~iwd~~--~~~~~~~~~~h~~~v~~--v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 389 (410)
T 1vyh_C 314 GSRDKTIKMWDVS--TGMCLMTLVGHDNWVRG--VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 389 (410)
T ss_dssp EETTSEEEEEETT--TTEEEEEEECCSSCEEE--EEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEEC
T ss_pred EeCCCeEEEEECC--CCceEEEEECCCCcEEE--EEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEc
Confidence 9999999999997 55588999999999877 8999999999999999999999999999999999999999999999
Q ss_pred CCCceEEeeCCCe
Q 037288 473 TQRSMGPQIEGKI 485 (513)
Q Consensus 473 p~~~~~~t~~~~~ 485 (513)
|++.++++++.|-
T Consensus 390 ~~~~~l~sgs~D~ 402 (410)
T 1vyh_C 390 KTAPYVVTGSVDQ 402 (410)
T ss_dssp SSSSCEEEEETTS
T ss_pred CCCCEEEEEeCCC
Confidence 9988888877663
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.6e-31 Score=260.22 Aligned_cols=226 Identities=15% Similarity=0.122 Sum_probs=181.8
Q ss_pred eccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEE-----eeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWV-----CRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~-----~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
...|...|.+++|+|++.+++.+.|+.|+|||+.+++.... ..|...|++++|+|+|++|++|+.|++|++||++
T Consensus 78 ~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eeccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 44567889999999997666555667799999998864322 2488899999999999999999999999999999
Q ss_pred CCccccccccccccCcCeEEEeeCC----eEEEeE-------eecccCcccceeEeec-CCCceEEEEEcCCCCEEEEEe
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKANIWPSHTTFM-PSSISCLQSLQLYDQYFLASS 394 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~s 394 (513)
+++. +..+.+|...|.+++|++ .+++++ ||.+.++......... ...+.++.+.+.++++|++|+
T Consensus 158 ~~~~---~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 158 QQVV---LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp TTEE---EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred CCcE---EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 8876 558999999999999988 466776 9988776443222222 334566544334678899999
Q ss_pred cCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcC
Q 037288 395 MDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE-RFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRT 473 (513)
Q Consensus 395 ~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g-~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p 473 (513)
.||.|++||++ ...++.++.+|...|.. ++|+|++ ++|++|+.|++|+|||+.+++++. +..|...|++++|+|
T Consensus 235 ~dg~v~~wd~~--~~~~~~~~~~h~~~v~~--v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 235 ENGTVSLVDTK--STSCVLSSAVHSQCVTG--LVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQAHRDFVRDATWSP 309 (344)
T ss_dssp TTSEEEEEESC--C--CCEEEECCSSCEEE--EEECSSSSCCEEEEETTSCEEEECTTCCEEEE-ECCCSSCEEEEEECS
T ss_pred cCCcEEEEECC--CCcEEEEEcCCCCCEEE--EEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-EcCCCCCEEEEEEeC
Confidence 99999999998 56689999999999877 8999998 589999999999999999998764 678899999999999
Q ss_pred CC-ceEEeeCCCe
Q 037288 474 QR-SMGPQIEGKI 485 (513)
Q Consensus 474 ~~-~~~~t~~~~~ 485 (513)
++ .+++|++.|-
T Consensus 310 ~~~~llas~s~D~ 322 (344)
T 4gqb_B 310 LNHSLLTTVGWDH 322 (344)
T ss_dssp SSTTEEEEEETTS
T ss_pred CCCeEEEEEcCCC
Confidence 85 5777776653
No 7
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8.3e-31 Score=259.27 Aligned_cols=247 Identities=13% Similarity=0.115 Sum_probs=191.8
Q ss_pred CccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEE-----EeeeCC
Q 037288 223 GGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASW-----VCRSKS 297 (513)
Q Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~-----~~~~~~ 297 (513)
+|.+.+|+..+..... .......+|...|.+++|+|++.+++++.+++|+|||+.+++... ...|..
T Consensus 69 d~~v~~~~~~~~~~~~--------~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~ 140 (357)
T 4g56_B 69 GGSIWVFKDPEGAPNE--------SLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDD 140 (357)
T ss_dssp CEEEEEESSCC---CG--------GGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSS
T ss_pred cCeEEEEECCCCCcce--------eEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCC
Confidence 6677777665432211 112335678899999999999998888888889999999886432 234788
Q ss_pred CeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC----eEEEeE-------eecccCccc
Q 037288 298 DILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKANIW 366 (513)
Q Consensus 298 ~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~~~ 366 (513)
.|++++|+|++++|++|+.|+.|++||+++++. +..+.+|...|.+++|++ .+++++ |+...++..
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~---~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~ 217 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV---LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA 217 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE---EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee
Confidence 899999999999999999999999999998876 448899999999999987 466666 888877655
Q ss_pred ceeEeec-CCCceEEEEEcCC-CCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCC-CEEEEEeCCC
Q 037288 367 PSHTTFM-PSSISCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE-RFVMSGGEDC 443 (513)
Q Consensus 367 ~~~~~~~-~~~v~~~~~~~~~-~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g-~~l~sg~~Dg 443 (513)
....... ...+.++ .|+|+ +.+|++|+.|+.|++||++ ...++.++.+|...|.. ++|+|++ ++|++|+.||
T Consensus 218 ~~~~~~~~~~~v~~v-~~sp~~~~~la~g~~d~~i~~wd~~--~~~~~~~~~~~~~~v~~--l~~sp~~~~~lasgs~D~ 292 (357)
T 4g56_B 218 TRIDFCASDTIPTSV-TWHPEKDDTFACGDETGNVSLVNIK--NPDSAQTSAVHSQNITG--LAYSYHSSPFLASISEDC 292 (357)
T ss_dssp CBCCCTTCCSCEEEE-EECTTSTTEEEEEESSSCEEEEESS--CGGGCEEECCCSSCEEE--EEECSSSSCCEEEEETTS
T ss_pred eeeeeccccccccch-hhhhcccceEEEeecccceeEEECC--CCcEeEEEeccceeEEE--EEEcCCCCCEEEEEeCCC
Confidence 4333333 3455565 66665 6789999999999999998 55688999999999877 8999987 6899999999
Q ss_pred cEEEEeCCCCeEEEEecCCCCCeEEEEEcC-CCceEEeeCCCee
Q 037288 444 KLRIWSIRSGELVFEDKFSNSVPSAVCWRT-QRSMGPQIEGKIH 486 (513)
Q Consensus 444 ~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p-~~~~~~t~~~~~~ 486 (513)
+|+|||+.+++++..+ .|...|++++|+| ++.+|+|++.|-.
T Consensus 293 ~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 293 TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 9999999999988775 6788999999999 5888888876644
No 8
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.6e-30 Score=254.37 Aligned_cols=273 Identities=15% Similarity=0.121 Sum_probs=205.9
Q ss_pred eeCCCCceeeeeEEeccccCeEEEEEeecccccccceeEEeeeccccccccccccccCCCCCccccCcceeeecccceEE
Q 037288 114 VQTPEGQFRTDVLLTGSVNGFFSLFEVGNVGQHAHDTVKFIPSCVWPRIKDNKTESSKAPEHIWRLNKASILMPSSVSCI 193 (513)
Q Consensus 114 ~~~~~g~~~~~~l~tg~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~s~i~si 193 (513)
.++|+| ..|++|+.||.|++|+....... ..+. .+...+..+.|+|++..+.
T Consensus 71 ~~s~d~----~~l~s~s~Dg~v~vWd~~~~~~~--~~~~--------------~~~~~v~~~~~sp~g~~la-------- 122 (354)
T 2pbi_B 71 DWCKDK----RRIVSSSQDGKVIVWDSFTTNKE--HAVT--------------MPCTWVMACAYAPSGCAIA-------- 122 (354)
T ss_dssp EECTTS----SEEEEEETTSEEEEEETTTCCEE--EEEE--------------CSSSCCCEEEECTTSSEEE--------
T ss_pred EECCCC----CEEEEEeCCCeEEEEECCCCCcc--eEEe--------------cCCCCEEEEEECCCCCEEE--------
Confidence 466666 46999999999999997332210 0111 1112255555655522221
Q ss_pred EecCCCCccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEE
Q 037288 194 KLFGKHPSCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVI 273 (513)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s 273 (513)
.+..++.+.+|++...... ........+.+|...|.+++|+|++..|++
T Consensus 123 -------------------------sg~~d~~i~v~~~~~~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t 171 (354)
T 2pbi_B 123 -------------------------CGGLDNKCSVYPLTFDKNE------NMAAKKKSVAMHTNYLSACSFTNSDMQILT 171 (354)
T ss_dssp -------------------------EESTTSEEEEEECCCCTTC------CSGGGCEEEEECSSCEEEEEECSSSSEEEE
T ss_pred -------------------------EeeCCCCEEEEEEeccccc------cccccceeeeccCCcEEEEEEeCCCCEEEE
Confidence 1234677777776532211 011123457789999999999999998888
Q ss_pred Ee-CCeEEEEECCCCcEEEEee-eCCCeEEEEEec--CCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEee
Q 037288 274 GT-NLGAAMVDMETGMASWVCR-SKSDILAQQVIH--SGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQR 349 (513)
Q Consensus 274 ~s-~~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 349 (513)
++ |++|++||+++++.+..+. |...|.+++|+| ++++|++|+.||+|++||+++++. +..+.+|...|.++
T Consensus 172 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~---~~~~~~h~~~v~~v-- 246 (354)
T 2pbi_B 172 ASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC---VQAFETHESDVNSV-- 246 (354)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEE--
T ss_pred EeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE---EEEecCCCCCeEEE--
Confidence 76 5569999999999877766 778899999987 468999999999999999998875 44778888888885
Q ss_pred CCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEE
Q 037288 350 NDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGV 429 (513)
Q Consensus 350 ~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~ 429 (513)
.++|++++|++|+.|+.|++||++ ....+..+..+........++|
T Consensus 247 --------------------------------~~~p~~~~l~s~s~D~~v~lwd~~--~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 247 --------------------------------RYYPSGDAFASGSDDATCRLYDLR--ADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp --------------------------------EECTTSSEEEEEETTSCEEEEETT--TTEEEEEECCTTCCSCEEEEEE
T ss_pred --------------------------------EEeCCCCEEEEEeCCCeEEEEECC--CCcEEEEEcCCCcccceeEEEE
Confidence 455689999999999999999997 4445656654432222334899
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 430 DQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 430 s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+|+|++|++|+.|+.|++||+.+++.+..+..|...|++++|+|++.++++++.|
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 9999999999999999999999999999999999999999999998888887766
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-29 Score=245.61 Aligned_cols=230 Identities=11% Similarity=0.081 Sum_probs=191.8
Q ss_pred eEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 249 MHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
..++.+|.+.|.+++|+|++.+|++|+ |+.|++||+.++..+..+. |...|.+++|+|++++|++|+.|++|++||+.
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 456889999999999999999999886 5569999999998877776 77789999999999999999999999999999
Q ss_pred CCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEec
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSM 395 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~ 395 (513)
+++. +..+.+|...|.+++|+| .+++++ |+...+.........|...+.++ .|+| ++.+|++|+.
T Consensus 86 ~~~~---~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v-~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 86 TGEK---VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV-AFNPKDPSTFASGCL 161 (304)
T ss_dssp TCCE---EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEE-EECTTCTTEEEEEET
T ss_pred CCcE---EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEE-EECCCCCCEEEEEeC
Confidence 8876 458899999999999999 677877 88876543222222355667776 6676 6899999999
Q ss_pred CCeEEEEecCCCCccceEEe-cCCCCceeEEEEEEc--CCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEc
Q 037288 396 DGTVKLYDHRLTTRGAVQSY-EGHVNSHTRIQLGVD--QSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWR 472 (513)
Q Consensus 396 dg~i~lwd~~~~~~~~~~~~-~~h~~~v~~~~~~~s--~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~ 472 (513)
|+.|++||++ ...+...+ .+|...+.. +.|+ +++.+|++|+.|++|++||+++++++..+..|...|.+++|+
T Consensus 162 D~~v~iwd~~--~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~ 237 (304)
T 2ynn_A 162 DRTVKVWSLG--QSTPNFTLTTGQERGVNY--VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (304)
T ss_dssp TSEEEEEETT--CSSCSEEEECCCTTCEEE--EEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred CCeEEEEECC--CCCccceeccCCcCcEEE--EEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEEC
Confidence 9999999997 44444444 456677777 5555 478899999999999999999999999999999999999999
Q ss_pred CCCceEEeeCCCee
Q 037288 473 TQRSMGPQIEGKIH 486 (513)
Q Consensus 473 p~~~~~~t~~~~~~ 486 (513)
|++.++++++.|-.
T Consensus 238 p~~~~l~s~s~Dg~ 251 (304)
T 2ynn_A 238 PTLPIIISGSEDGT 251 (304)
T ss_dssp SSSSEEEEEETTSC
T ss_pred CCCCEEEEEcCCCe
Confidence 99888888876643
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.98 E-value=8.1e-30 Score=257.08 Aligned_cols=227 Identities=14% Similarity=0.101 Sum_probs=197.0
Q ss_pred eEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 249 MHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
...+.+|..+|++++|+|++.++++|+. +.|++||+.+++....+. |...|.+++|+|++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 4558899999999999999999998865 569999999998776665 78889999999999999999999999999998
Q ss_pred CCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEeec-CCCceEEEEEcCCCCEEEEEec
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTFM-PSSISCLQSLQLYDQYFLASSM 395 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~s~ 395 (513)
+.+. +..+.+|...|.+++|+| .+++++ |+...+... ..+.. ...+.+ +.+++++.+|++|+.
T Consensus 181 ~~~~---~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~--~~~~~h~~~v~~-~~~~~~g~~l~s~s~ 254 (410)
T 1vyh_C 181 GFEC---IRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWVRM-VRPNQDGTLIASCSN 254 (410)
T ss_dssp SSCE---EECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEE-EEECTTSSEEEEEET
T ss_pred CCce---eEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE--EEEeCCCccEEE-EEECCCCCEEEEEcC
Confidence 8765 558899999999999998 677777 998877643 34443 444555 578999999999999
Q ss_pred CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCC--------------------CCEEEEEeCCCcEEEEeCCCCeE
Q 037288 396 DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQS--------------------ERFVMSGGEDCKLRIWSIRSGEL 455 (513)
Q Consensus 396 dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~--------------------g~~l~sg~~Dg~v~vwd~~~~~~ 455 (513)
|+.|++||++ ...+...+.+|...+.+ ++|+|+ |.+|++|+.|++|++||+.++++
T Consensus 255 D~~v~vwd~~--~~~~~~~~~~h~~~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~ 330 (410)
T 1vyh_C 255 DQTVRVWVVA--TKECKAELREHRHVVEC--ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330 (410)
T ss_dssp TSCEEEEETT--TCCEEEEECCCSSCEEE--EEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE
T ss_pred CCeEEEEECC--CCceeeEecCCCceEEE--EEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce
Confidence 9999999997 55588889999999877 888886 67999999999999999999999
Q ss_pred EEEecCCCCCeEEEEEcCCCceEEeeCCCe
Q 037288 456 VFEDKFSNSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 456 ~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
+..+..|...|++++|+|++.++++++.|-
T Consensus 331 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~ 360 (410)
T 1vyh_C 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDK 360 (410)
T ss_dssp EEEEECCSSCEEEEEECSSSSCEEEEETTT
T ss_pred EEEEECCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 999999999999999999988888877664
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=4.1e-29 Score=242.07 Aligned_cols=244 Identities=15% Similarity=0.223 Sum_probs=201.3
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSD 298 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~ 298 (513)
..+|.+.+|++.+.. ....+.+|...|.+++|+|++++|++|+. +.|++||+.+++.+..+. |...
T Consensus 42 ~~dg~i~iw~~~~~~------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 109 (312)
T 4ery_A 42 SADKLIKIWGAYDGK------------FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY 109 (312)
T ss_dssp ETTSCEEEEETTTCC------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred eCCCeEEEEeCCCcc------------cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCC
Confidence 357788888775332 24568899999999999999999998865 459999999999877666 7788
Q ss_pred eEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccce
Q 037288 299 ILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPS 368 (513)
Q Consensus 299 V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~ 368 (513)
|.+++|+|++++|++|+.|+.|++||+++++. +..+..|..+|.+++|++ .+++++ |+...++....
T Consensus 110 v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC---LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 186 (312)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE---EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeE
Confidence 99999999999999999999999999998875 458889999999999998 677776 88877654322
Q ss_pred eEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEc-CCCCEEEEEeCCCcEEE
Q 037288 369 HTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVD-QSERFVMSGGEDCKLRI 447 (513)
Q Consensus 369 ~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s-~~g~~l~sg~~Dg~v~v 447 (513)
....+...+. .+.++|++++|++++.|+.|++||++ ...++..+.+|......+...++ +++.+|++|+.||.|++
T Consensus 187 ~~~~~~~~~~-~~~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~v 263 (312)
T 4ery_A 187 LIDDDNPPVS-FVKFSPNGKYILAATLDNTLKLWDYS--KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 263 (312)
T ss_dssp ECCSSCCCEE-EEEECTTSSEEEEEETTTEEEEEETT--TTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEE
T ss_pred EeccCCCceE-EEEECCCCCEEEEEcCCCeEEEEECC--CCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEE
Confidence 2112233344 45899999999999999999999997 55588889988876555434454 57889999999999999
Q ss_pred EeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeC
Q 037288 448 WSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 448 wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
||+.+++++..+..|...|.+++|+|++.++++++
T Consensus 264 wd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 264 WNLQTKEIVQKLQGHTDVVISTACHPTENIIASAA 298 (312)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred EECCCchhhhhhhccCCcEEEEeecCcCCceEEEE
Confidence 99999999999999999999999999988888765
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=1.1e-28 Score=242.27 Aligned_cols=232 Identities=16% Similarity=0.160 Sum_probs=195.7
Q ss_pred eeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEEC
Q 037288 248 TMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 248 ~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~ 325 (513)
....+.+|...|++++|+|++++|++|+. +.|++||+.+++.+..+. |...|.+++|+|++++|++|+.|+.|++||+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 45679999999999999999999998865 569999999998777666 6777999999999999999999999999999
Q ss_pred CCCccc-cccccccccCcCeEEEeeCC--eEEEeE-------eecccCcccceeEee-cCCCceEEEEEcCCCCEEEEEe
Q 037288 326 RKRQRG-CSSRAGRRHRIPYSRLQRND--RVTNEQ-------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLASS 394 (513)
Q Consensus 326 ~~~~~~-~~~~~~~~h~~~v~~v~~~~--~~~s~~-------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s 394 (513)
...... .....+.+|...|.++.|.+ .+++++ |+...+... ..+. |...+.++ .++|++++|++|+
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~--~~~~~h~~~v~~~-~~~~~~~~l~sg~ 203 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT--TTFTGHTGDVMSL-SLAPDTRLFVSGA 203 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEE-EECTTSSEEEEEE
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEE--EEEcCCCCceEEE-EECCCCCEEEEEe
Confidence 876422 11456789999999999987 777777 988776643 3333 45566665 7889999999999
Q ss_pred cCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCC--CCCeEEEEEc
Q 037288 395 MDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFS--NSVPSAVCWR 472 (513)
Q Consensus 395 ~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~--~~~v~~v~~~ 472 (513)
.|+.|++||++ ...++.++.+|...|.. ++|+|++++|++|+.||+|++||+++++.+..+..+ ...|++++|+
T Consensus 204 ~d~~v~~wd~~--~~~~~~~~~~h~~~v~~--v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 279 (340)
T 1got_B 204 CDASAKLWDVR--EGMCRQTFTGHESDINA--ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp TTSCEEEEETT--TCSEEEEECCCSSCEEE--EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred CCCcEEEEECC--CCeeEEEEcCCcCCEEE--EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEEC
Confidence 99999999998 55688899999999877 899999999999999999999999999988877543 3469999999
Q ss_pred CCCceEEeeCCCee
Q 037288 473 TQRSMGPQIEGKIH 486 (513)
Q Consensus 473 p~~~~~~t~~~~~~ 486 (513)
|++.++++++.|-.
T Consensus 280 ~~g~~l~~g~~d~~ 293 (340)
T 1got_B 280 KSGRLLLAGYDDFN 293 (340)
T ss_dssp TTSSEEEEEETTSE
T ss_pred CCCCEEEEECCCCe
Confidence 99888888776643
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=5.2e-29 Score=245.18 Aligned_cols=232 Identities=11% Similarity=0.079 Sum_probs=182.6
Q ss_pred eccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCc--EEEEe-eeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCC
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGM--ASWVC-RSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRK 327 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~--~~~~~-~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 327 (513)
..+|...|.+++|+|++++|++|+. +.+++||+.++. ++..+ .|...|.+++|+|++++|++|+.|++|++||++.
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 3578899999999999999999875 569999998774 34444 3888899999999999999999999999999987
Q ss_pred CccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEee-cCCCceEEEEEcCCCCEEEEEecC
Q 037288 328 RQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLASSMD 396 (513)
Q Consensus 328 ~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~d 396 (513)
......+..+.+|...|.+++|+| .+++++ |+...+.......+. |...|.++ .|+|++++|++++.|
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l-~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSL-AFDPSGQRLASCSDD 215 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE-EECTTSSEEEEEETT
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEE-EECCCCCEEEEEeCC
Confidence 654322557889999999999999 677776 887766544444443 45566665 889999999999999
Q ss_pred CeEEEEecCCCCc-------------cceEEecC-CCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--------
Q 037288 397 GTVKLYDHRLTTR-------------GAVQSYEG-HVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGE-------- 454 (513)
Q Consensus 397 g~i~lwd~~~~~~-------------~~~~~~~~-h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~-------- 454 (513)
+.|++||.+.... .++.++.+ |...+.. ++|+|++..|++++.|+.|++|+...+.
T Consensus 216 ~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~--v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~ 293 (345)
T 3fm0_A 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYD--IAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFS 293 (345)
T ss_dssp SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEE--EEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEE
T ss_pred CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEE--EEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEE
Confidence 9999999742111 13445555 7777766 8999999999999999999999987642
Q ss_pred -EEEEecCCCCCeEEEEEcCCC-ceEEeeCCCee
Q 037288 455 -LVFEDKFSNSVPSAVCWRTQR-SMGPQIEGKIH 486 (513)
Q Consensus 455 -~~~~~~~~~~~v~~v~~~p~~-~~~~t~~~~~~ 486 (513)
.......|...|++++|+|++ .++|+++.|-.
T Consensus 294 ~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~ 327 (345)
T 3fm0_A 294 LTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE 327 (345)
T ss_dssp EEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEeeecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence 122345788999999999995 58888876643
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=4.5e-29 Score=243.04 Aligned_cols=227 Identities=11% Similarity=0.137 Sum_probs=189.4
Q ss_pred EEeccccCcEEEEEEcCC----CCEEEEEe-CCeEEEEECCCCcEE--EEe-eeCCCeEEEEEecCCcEEEEEeCCCeEE
Q 037288 250 HLVASFKCTVWTADFCTN----PSQAVIGT-NLGAAMVDMETGMAS--WVC-RSKSDILAQQVIHSGNVVLCGFRNGAIV 321 (513)
Q Consensus 250 ~~~~~h~~~V~~~~~s~~----g~~l~s~s-~~~i~vwd~~~~~~~--~~~-~~~~~V~~l~~~~~~~~l~sg~~dg~i~ 321 (513)
..+.+|.+.|++++|+|+ +.+|++|+ |++|+|||+.+++.. ..+ .|...|.+++|++++.++++|+.|++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 446799999999999984 56888886 556999999877643 223 4888899999999999999999999999
Q ss_pred EEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEeec-CCCceEEEEEcCCCCEE
Q 037288 322 TVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTFM-PSSISCLQSLQLYDQYF 390 (513)
Q Consensus 322 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l 390 (513)
+||+.+++. +..+..|...+.+++|+| .+++++ |+...+.. ...+.. ...+.+ +.++|++++|
T Consensus 106 lWd~~~~~~---~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~--~~~~~~~~~~v~~-~~~spdg~~l 179 (321)
T 3ow8_A 106 LWDLENGKQ---IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK--EYSLDTRGKFILS-IAYSPDGKYL 179 (321)
T ss_dssp EEETTTTEE---EEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE--EEEEECSSSCEEE-EEECTTSSEE
T ss_pred EEECCCCCE---EEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce--eEEecCCCceEEE-EEECCCCCEE
Confidence 999998876 447888999999999999 666665 87776653 233333 344555 5889999999
Q ss_pred EEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEE
Q 037288 391 LASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVC 470 (513)
Q Consensus 391 ~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~ 470 (513)
++|+.||.|++||++ ....+.++.+|...+.. ++|+|++++|++|+.|+.|++||+++++++..+..|...|.+++
T Consensus 180 asg~~dg~i~iwd~~--~~~~~~~~~~h~~~v~~--l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 255 (321)
T 3ow8_A 180 ASGAIDGIINIFDIA--TGKLLHTLEGHAMPIRS--LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA 255 (321)
T ss_dssp EEEETTSCEEEEETT--TTEEEEEECCCSSCCCE--EEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred EEEcCCCeEEEEECC--CCcEEEEEcccCCceeE--EEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEE
Confidence 999999999999997 55588899999999887 89999999999999999999999999999999999999999999
Q ss_pred EcCCCceEEeeCCCee
Q 037288 471 WRTQRSMGPQIEGKIH 486 (513)
Q Consensus 471 ~~p~~~~~~t~~~~~~ 486 (513)
|+|++.++++++.|-.
T Consensus 256 ~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 256 FCPDDTHFVSSSSDKS 271 (321)
T ss_dssp ECTTSSEEEEEETTSC
T ss_pred ECCCCCEEEEEeCCCc
Confidence 9999888888776643
No 15
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=1.9e-29 Score=251.71 Aligned_cols=276 Identities=17% Similarity=0.206 Sum_probs=208.0
Q ss_pred eeeCCCCceeeeeEEeccccCeEEEEEeecccccccceeEEeeeccccccccccccccCCCCCccccCcceeeecccceE
Q 037288 113 NVQTPEGQFRTDVLLTGSVNGFFSLFEVGNVGQHAHDTVKFIPSCVWPRIKDNKTESSKAPEHIWRLNKASILMPSSVSC 192 (513)
Q Consensus 113 ~~~~~~g~~~~~~l~tg~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~s~i~s 192 (513)
..++|+| +.|++|+.||.|++|++.+... ...+. .+...+..+.|+|++..+..
T Consensus 72 ~~~sp~~----~~l~s~s~D~~v~iWd~~~~~~--~~~~~--------------~h~~~v~~~~~s~~g~~las------ 125 (380)
T 3iz6_a 72 LDWTPEK----NWIVSASQDGRLIVWNALTSQK--THAIK--------------LHCPWVMECAFAPNGQSVAC------ 125 (380)
T ss_dssp EEECTTS----SCEEEEETTSEEEEEETTTTEE--EEEEE--------------CCCTTCCCCEECTTSSEEEE------
T ss_pred EEEcCCC----CEEEEEeCCCeEEEEECCCCcc--ceEEe--------------cCCCCEEEEEECCCCCEEEE------
Confidence 3467766 4699999999999999744321 11111 12233677777776332221
Q ss_pred EEecCCCCccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCC-CEE
Q 037288 193 IKLFGKHPSCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNP-SQA 271 (513)
Q Consensus 193 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g-~~l 271 (513)
+..++.+.+|++......... .+....+.+|...|.++.|+|++ ..|
T Consensus 126 ---------------------------~~~d~~v~iw~~~~~~~~~~~-----~~~~~~~~gh~~~v~~~~~~~~~~~~l 173 (380)
T 3iz6_a 126 ---------------------------GGLDSACSIFNLSSQADRDGN-----MPVSRVLTGHKGYASSCQYVPDQETRL 173 (380)
T ss_dssp ---------------------------CCSSSCCEEEECCCCSSCCCS-----STTCCBCCCCSSCCCCCBCCSSSSSCE
T ss_pred ---------------------------eeCCCcEEEEECCCCccccCC-----ccceeeccCCCcceEEEEEecCCCCEE
Confidence 235677888887643221111 11234478999999999999964 467
Q ss_pred EEEe-CCeEEEEECCCCcEEEEe------eeCCCeEEEEEec-CCcEEEEEeCCCeEEEEECCCCccccccccccccCcC
Q 037288 272 VIGT-NLGAAMVDMETGMASWVC------RSKSDILAQQVIH-SGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIP 343 (513)
Q Consensus 272 ~s~s-~~~i~vwd~~~~~~~~~~------~~~~~V~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 343 (513)
++|+ |++|++||+.+++.+..+ .|...|.+++|++ ++++|++|+.|++|++||++.... . +..+.+|...
T Consensus 174 ~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~-~-~~~~~~h~~~ 251 (380)
T 3iz6_a 174 ITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR-A-VRTYHGHEGD 251 (380)
T ss_dssp EEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC-C-CEEECCCSSC
T ss_pred EEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc-c-eEEECCcCCC
Confidence 7775 556999999999987766 3677899999987 789999999999999999985432 1 4577888888
Q ss_pred eEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCC---
Q 037288 344 YSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVN--- 420 (513)
Q Consensus 344 v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~--- 420 (513)
|.++ .|+|++++|++|+.||+|++||++ ....+..+..+..
T Consensus 252 v~~v----------------------------------~~~p~~~~l~s~s~D~~i~lwd~~--~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 252 INSV----------------------------------KFFPDGQRFGTGSDDGTCRLFDMR--TGHQLQVYNREPDRND 295 (380)
T ss_dssp CCEE----------------------------------EECTTSSEEEEECSSSCEEEEETT--TTEEEEEECCCCSSSC
T ss_pred eEEE----------------------------------EEecCCCeEEEEcCCCeEEEEECC--CCcEEEEecccccccc
Confidence 8885 456699999999999999999997 5556777765432
Q ss_pred ----ceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe----cCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 421 ----SHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFED----KFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 421 ----~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~----~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
.+.. ++|+|+|++|++|+.||.|++||+.+++.+..+ ..|...|++++|+|++.++++++.|-.
T Consensus 296 ~~~~~v~~--~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 296 NELPIVTS--VAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp CSSCSCSE--EEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred cccCceEE--EEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 2555 899999999999999999999999999988887 678899999999999999999887744
No 16
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=9.5e-29 Score=260.16 Aligned_cols=236 Identities=13% Similarity=0.169 Sum_probs=194.2
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCC-eEEEEECCCCcEEEEeeeCCCeE
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNL-GAAMVDMETGMASWVCRSKSDIL 300 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~-~i~vwd~~~~~~~~~~~~~~~V~ 300 (513)
.+|.+.+|++.. ..+..+.+|...|.+++|+|+++++++++++ .|++||...........|...|.
T Consensus 323 ~d~~i~~w~~~~-------------~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~ 389 (577)
T 2ymu_A 323 DDKTVKLWNRNG-------------QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR 389 (577)
T ss_dssp TTSCEEEEETTS-------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEE
T ss_pred CCCeEEEEeCCC-------------CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeE
Confidence 467777777542 1345678999999999999999999998755 59999975433334444888899
Q ss_pred EEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeE
Q 037288 301 AQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHT 370 (513)
Q Consensus 301 ~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~ 370 (513)
+++|+|++++|++|+.|+.|++||... +. +..+.+|...|.+++|+| .+++++ |+... +. ...
T Consensus 390 ~~~~s~dg~~l~~~~~d~~v~~~~~~~-~~---~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~--~~~ 462 (577)
T 2ymu_A 390 GVAFSPDGQTIASASDDKTVKLWNRNG-QL---LQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QL--LQT 462 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEEECTTC-CE---EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CE--EEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeCCC-CE---EEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CE--EEE
Confidence 999999999999999999999999643 32 557889999999999998 666666 77532 21 222
Q ss_pred e-ecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 037288 371 T-FMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWS 449 (513)
Q Consensus 371 ~-~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd 449 (513)
+ .+...+.++ .|+|++++|++++.|+.|++||. ...++.++.+|...|+. ++|+|+|++|++++.||.|++||
T Consensus 463 ~~~~~~~v~~~-~~spd~~~las~~~d~~i~iw~~---~~~~~~~~~~h~~~v~~--l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 463 LTGHSSSVRGV-AFSPDGQTIASASDDKTVKLWNR---NGQLLQTLTGHSSSVRG--VAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp EECCSSCEEEE-EECTTSCEEEEEETTSEEEEEET---TSCEEEEEECCSSCEEE--EEECTTSSCEEEEETTSEEEEEC
T ss_pred EcCCCCCEEEE-EEcCCCCEEEEEeCCCEEEEEcC---CCCEEEEEeCCCCCEEE--EEEcCCCCEEEEEECcCEEEEEe
Confidence 3 345566664 88999999999999999999996 46688999999999877 89999999999999999999999
Q ss_pred CCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 450 IRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 450 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
. +++++..+..|.+.|++++|+|++.+|+|++.|
T Consensus 537 ~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 537 R-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp T-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred C-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 5 788999999999999999999998888887766
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=3.7e-29 Score=265.40 Aligned_cols=250 Identities=11% Similarity=0.081 Sum_probs=185.6
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEe------
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVC------ 293 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~------ 293 (513)
..+|.+.+|++.+...... +... .....+|...|++++|+|++++|++++. ++|++||+.+++++..+
T Consensus 209 s~D~~i~lwd~~~g~~~~~---~~~~--~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 209 GGDGTIVLYNGVDGTKTGV---FEDD--SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp ETTSCEEEEETTTCCEEEE---CBCT--TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred ECCCcEEEEECCCCcEeee---eccc--cccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 3578888888764332100 0000 0002279999999999999999998865 56999999987654322
Q ss_pred --------------------------------------eeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccc
Q 037288 294 --------------------------------------RSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSR 335 (513)
Q Consensus 294 --------------------------------------~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 335 (513)
.|...|.+++|+|+|++|++|+.|++|++||+.++....
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~--- 360 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR--- 360 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE---
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceee---
Confidence 367789999999999999999999999999998654311
Q ss_pred cc-cc---------------------------------------------------------------------------
Q 037288 336 AG-RR--------------------------------------------------------------------------- 339 (513)
Q Consensus 336 ~~-~~--------------------------------------------------------------------------- 339 (513)
.+ .+
T Consensus 361 ~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~ 440 (611)
T 1nr0_A 361 VFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG 440 (611)
T ss_dssp CSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETT
T ss_pred ecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCC
Confidence 00 11
Q ss_pred ------cCcCeEEEeeCC---eEEEeE-------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q 037288 340 ------HRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYD 403 (513)
Q Consensus 340 ------h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd 403 (513)
|...+.+++|+| .+++++ |+...+.........|...|.++ .|+|++++|++++.|+.|++||
T Consensus 441 ~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v-~fspdg~~las~s~d~~v~~w~ 519 (611)
T 1nr0_A 441 KLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSV-AFSNNGAFLVATDQSRKVIPYS 519 (611)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEE-EECTTSSEEEEEETTSCEEEEE
T ss_pred ceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEE-EECCCCCEEEEEcCCCCEEEEE
Confidence 234567788887 566666 88766544333445567777775 8899999999999999999999
Q ss_pred cCCCC-ccceEE--ecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-EE-EEecCC-CCCeEEEEEcCCCce
Q 037288 404 HRLTT-RGAVQS--YEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGE-LV-FEDKFS-NSVPSAVCWRTQRSM 477 (513)
Q Consensus 404 ~~~~~-~~~~~~--~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~-~~-~~~~~~-~~~v~~v~~~p~~~~ 477 (513)
+. . ...+.. +.+|...|.+ ++|+|+|++|++|+.|++|++||+.+++ .+ ..+..| ...|++++|+|++.
T Consensus 520 ~~--~~~~~~~~~~~~~H~~~V~~--v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~- 594 (611)
T 1nr0_A 520 VA--NNFELAHTNSWTFHTAKVAC--VSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT- 594 (611)
T ss_dssp GG--GTTEESCCCCCCCCSSCEEE--EEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-
T ss_pred cC--CCCceeeeeeeeecccceeE--EEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-
Confidence 96 3 223332 3459998877 9999999999999999999999998865 33 567778 78999999999987
Q ss_pred EEeeCCC
Q 037288 478 GPQIEGK 484 (513)
Q Consensus 478 ~~t~~~~ 484 (513)
+++++.|
T Consensus 595 l~s~~~D 601 (611)
T 1nr0_A 595 IVSAGQD 601 (611)
T ss_dssp EEEEETT
T ss_pred EEEecCC
Confidence 6666655
No 18
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=9.5e-28 Score=252.51 Aligned_cols=237 Identities=13% Similarity=0.176 Sum_probs=196.1
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEeeeCCCeE
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCRSKSDIL 300 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~~~~~V~ 300 (513)
.++.+.+|+... ..+..+.+|...|++++|+|++.+++++++ +.|++||+..........|...|.
T Consensus 282 ~d~~i~~w~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~ 348 (577)
T 2ymu_A 282 DDKTVKLWNRNG-------------QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVW 348 (577)
T ss_dssp TTSCEEEEETTS-------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEE
T ss_pred CCCEEEEEeCCC-------------cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEE
Confidence 456677776431 134568899999999999999999998865 459999998776666666888999
Q ss_pred EEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeE
Q 037288 301 AQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHT 370 (513)
Q Consensus 301 ~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~ 370 (513)
+++|+|++++|++|+.|+.|++||... +. +..+.+|..+|.+++|+| .+++++ |+.. ++. ...
T Consensus 349 ~~~~s~~g~~l~~~~~dg~v~~~~~~~-~~---~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~--~~~ 421 (577)
T 2ymu_A 349 GVAFSPDGQTIASASDDKTVKLWNRNG-QL---LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQL--LQT 421 (577)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTC-CE---EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCE--EEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEcCCC-CE---EEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCE--EEE
Confidence 999999999999999999999999643 33 557889999999999998 677766 7643 221 223
Q ss_pred e-ecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 037288 371 T-FMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWS 449 (513)
Q Consensus 371 ~-~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd 449 (513)
+ .+...+.++ .|+|++++|++++.|+.|++||. ....+..+.+|...+.. ++|+|++++|++++.|+.|++||
T Consensus 422 ~~~~~~~v~~~-~~s~d~~~l~~~~~d~~v~~w~~---~~~~~~~~~~~~~~v~~--~~~spd~~~las~~~d~~i~iw~ 495 (577)
T 2ymu_A 422 LTGHSSSVWGV-AFSPDDQTIASASDDKTVKLWNR---NGQLLQTLTGHSSSVRG--VAFSPDGQTIASASDDKTVKLWN 495 (577)
T ss_dssp EECCSSCEEEE-EECTTSSEEEEEETTSEEEEEET---TSCEEEEEECCSSCEEE--EEECTTSCEEEEEETTSEEEEEE
T ss_pred ecCCCCCeEEE-EECCCCCEEEEEcCCCEEEEEEC---CCCEEEEEcCCCCCEEE--EEEcCCCCEEEEEeCCCEEEEEc
Confidence 3 345566665 78999999999999999999997 45678889999999877 89999999999999999999999
Q ss_pred CCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCCe
Q 037288 450 IRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 450 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
. +++++..+..|...|++++|+|++.++++++.|-
T Consensus 496 ~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg 530 (577)
T 2ymu_A 496 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 530 (577)
T ss_dssp T-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred C-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcC
Confidence 5 7888999999999999999999988888877664
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1.1e-28 Score=247.44 Aligned_cols=218 Identities=16% Similarity=0.227 Sum_probs=177.9
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEeeeCCCe
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCRSKSDI 299 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~~~~~V 299 (513)
..+|.+.+|++.+. ..+..+.+|...|.+++|+|++.+|++|+. +.|++||+.++++...+.+...+
T Consensus 142 ~~d~~i~iwd~~~~------------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v 209 (393)
T 1erj_A 142 AEDRLIRIWDIENR------------KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV 209 (393)
T ss_dssp ETTSCEEEEETTTT------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCE
T ss_pred cCCCeEEEEECCCC------------cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCc
Confidence 35788888887643 234668899999999999999999998865 55999999999988888888899
Q ss_pred EEEEEec-CCcEEEEEeCCCeEEEEECCCCcccccc----ccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecC
Q 037288 300 LAQQVIH-SGNVVLCGFRNGAIVTVDVRKRQRGCSS----RAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMP 374 (513)
Q Consensus 300 ~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~----~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~ 374 (513)
.+++|+| ++++|++|+.|+.|++||++++.....+ ....+|...|.++
T Consensus 210 ~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v--------------------------- 262 (393)
T 1erj_A 210 TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV--------------------------- 262 (393)
T ss_dssp EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEE---------------------------
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEE---------------------------
Confidence 9999999 8999999999999999999887643211 1124566666664
Q ss_pred CCceEEEEEcCCCCEEEEEecCCeEEEEecCCCC----------ccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCc
Q 037288 375 SSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTT----------RGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCK 444 (513)
Q Consensus 375 ~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~----------~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~ 444 (513)
.|+|++++|++|+.|+.|++||++... ..+...+.+|...|.. ++|+|++.+|++|+.|+.
T Consensus 263 -------~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~--~~~~~~~~~l~sgs~D~~ 333 (393)
T 1erj_A 263 -------VFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS--VATTQNDEYILSGSKDRG 333 (393)
T ss_dssp -------EECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEE--EEECGGGCEEEEEETTSE
T ss_pred -------EECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEE--EEECCCCCEEEEEeCCCe
Confidence 556799999999999999999997321 1245678899998876 899999999999999999
Q ss_pred EEEEeCCCCeEEEEecCCCCCeEEEEEcC------CCceEEeeCCCee
Q 037288 445 LRIWSIRSGELVFEDKFSNSVPSAVCWRT------QRSMGPQIEGKIH 486 (513)
Q Consensus 445 v~vwd~~~~~~~~~~~~~~~~v~~v~~~p------~~~~~~t~~~~~~ 486 (513)
|++||+.+++++..+..|...|.+++|++ ++.+++|++.|-.
T Consensus 334 v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 334 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred EEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 99999999999999999999999999987 4667887776643
No 20
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=1.7e-28 Score=241.15 Aligned_cols=218 Identities=11% Similarity=0.049 Sum_probs=169.1
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCC-eEEEEECCCCcEEEEee-eCCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNL-GAAMVDMETGMASWVCR-SKSD 298 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~-~i~vwd~~~~~~~~~~~-~~~~ 298 (513)
..+|.+.+|++.+...... ....+.+|.+.|++++|+|+|++|++|+.+ +|++||+.+++++..+. |...
T Consensus 100 s~dg~v~lWd~~~~~~~~~--------~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~ 171 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIV--------SKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQ 171 (344)
T ss_dssp ETTSEEEEEEECTTSSCEE--------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred ECCCEEEEEeccCCCceeE--------eeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCc
Confidence 3578899999876543311 123466899999999999999999998755 59999999999887776 8888
Q ss_pred eEEEEEecCC-cEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC----eEEEeE-------eecccCccc
Q 037288 299 ILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKANIW 366 (513)
Q Consensus 299 V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~~~ 366 (513)
|.+++|++++ .+|++|+.|++|++||+++++... ......|...+.+++|+| .+++++ ||...++..
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~ 250 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPAS-QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV 250 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEE-ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC
T ss_pred eEEEEecCCCCCceeeeccccccccccccccceee-eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE
Confidence 9999999988 589999999999999999887644 223355677899999998 456665 998877643
Q ss_pred ceeEee-cCCCceEEEEEcCCC-CEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCC-EEEEEeCCC
Q 037288 367 PSHTTF-MPSSISCLQSLQLYD-QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSER-FVMSGGEDC 443 (513)
Q Consensus 367 ~~~~~~-~~~~v~~~~~~~~~~-~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~-~l~sg~~Dg 443 (513)
..+. |...|.++ .|+|++ ++|++|+.|++|+|||++ .+.+..+.+|.+.|.. ++|+|+++ +|++||.||
T Consensus 251 --~~~~~h~~~v~~v-~fsp~g~~~lasgs~D~~i~vwd~~---~~~~~~~~~H~~~V~~--v~~sp~~~~llas~s~D~ 322 (344)
T 4gqb_B 251 --LSSAVHSQCVTGL-VFSPHSVPFLASLSEDCSLAVLDSS---LSELFRSQAHRDFVRD--ATWSPLNHSLLTTVGWDH 322 (344)
T ss_dssp --EEEECCSSCEEEE-EECSSSSCCEEEEETTSCEEEECTT---CCEEEEECCCSSCEEE--EEECSSSTTEEEEEETTS
T ss_pred --EEEcCCCCCEEEE-EEccCCCeEEEEEeCCCeEEEEECC---CCcEEEEcCCCCCEEE--EEEeCCCCeEEEEEcCCC
Confidence 3443 45667765 788887 579999999999999996 3445678899999877 89999986 677999999
Q ss_pred cEEEEeCCCCeE
Q 037288 444 KLRIWSIRSGEL 455 (513)
Q Consensus 444 ~v~vwd~~~~~~ 455 (513)
+|++|++.+..+
T Consensus 323 ~v~~w~v~~~~~ 334 (344)
T 4gqb_B 323 QVVHHVVPTEPL 334 (344)
T ss_dssp CEEEEECCC---
T ss_pred eEEEEECCCCCC
Confidence 999999987543
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=241.41 Aligned_cols=221 Identities=9% Similarity=0.021 Sum_probs=160.1
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCC----cEEEEee-e
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETG----MASWVCR-S 295 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~----~~~~~~~-~ 295 (513)
.+|.+.+|++...... ......+..+.+|...|.+++|+|++++|++|+. ++|++||+... +++..+. |
T Consensus 78 ~D~~v~iw~~~~~~~~-----~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h 152 (330)
T 2hes_X 78 FDSTVSIWAKEESADR-----TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH 152 (330)
T ss_dssp TTSCEEEEEC------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC
T ss_pred CCCcEEEEEcccCcCc-----cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC
Confidence 5788888887532110 0011235668899999999999999999999875 56999999432 3444444 7
Q ss_pred CCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCC
Q 037288 296 KSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPS 375 (513)
Q Consensus 296 ~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~ 375 (513)
...|.+++|+|++.+|++|+.|++|++||++...... +..+.+|...|.+++|+
T Consensus 153 ~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~-~~~~~~h~~~v~~~~~~------------------------- 206 (330)
T 2hes_X 153 SQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWEC-VAVLNGHEGTVWSSDFD------------------------- 206 (330)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEE-EEEECCCSSCEEEEEEC-------------------------
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeE-EEEccCCCCcEEEEEec-------------------------
Confidence 8889999999999999999999999999998764333 56788999988886653
Q ss_pred CceEEEEEcCC--CCEEEEEecCCeEEEEecCCCCc------cceEEecC-CCCceeEEEEEEcCCCCEEEEEeCCCcEE
Q 037288 376 SISCLQSLQLY--DQYFLASSMDGTVKLYDHRLTTR------GAVQSYEG-HVNSHTRIQLGVDQSERFVMSGGEDCKLR 446 (513)
Q Consensus 376 ~v~~~~~~~~~--~~~l~s~s~dg~i~lwd~~~~~~------~~~~~~~~-h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~ 446 (513)
|+ +.+|++|+.|++|++||++.... .+...+.+ |...|.. ++|++++ +|++|+.||.|+
T Consensus 207 ---------~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~--v~~s~~~-~l~s~~~dg~v~ 274 (330)
T 2hes_X 207 ---------KTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYN--VAWGFNG-LIASVGADGVLA 274 (330)
T ss_dssp ---------CSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEE--EEECTTS-CEEEEETTSCEE
T ss_pred ---------CCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEE--EEEcCCC-EEEEEeCCCEEE
Confidence 45 67899999999999999862111 23445555 8888877 8888665 799999999999
Q ss_pred EEeCCCCe--EEEE-ecCCCC-CeEEEEEcC--CCceEEeeCCCe
Q 037288 447 IWSIRSGE--LVFE-DKFSNS-VPSAVCWRT--QRSMGPQIEGKI 485 (513)
Q Consensus 447 vwd~~~~~--~~~~-~~~~~~-~v~~v~~~p--~~~~~~t~~~~~ 485 (513)
+||+.+++ .+.. ...|.. .|++++|+| ++.++++++.|-
T Consensus 275 iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 275 VYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp EEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred EEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC
Confidence 99998874 3333 355665 899999999 577788777663
No 22
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=2.1e-28 Score=241.97 Aligned_cols=217 Identities=13% Similarity=0.049 Sum_probs=165.3
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCe
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDI 299 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V 299 (513)
.+|.+.+|++.+...... ......+|...|++++|+|++++|++|+. +.|++||+.+++++..+. |...|
T Consensus 113 ~dg~v~lWd~~~~~~~~~--------~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v 184 (357)
T 4g56_B 113 DSGAVELWEILEKESLLV--------NKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEV 184 (357)
T ss_dssp TTSCEEEC--------CC--------CCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCEEEEeeccccceeEE--------EeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 467888888775443211 12346689999999999999999998865 459999999999887776 78889
Q ss_pred EEEEEecCC-cEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC----eEEEeE-------eecccCcccc
Q 037288 300 LAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKANIWP 367 (513)
Q Consensus 300 ~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~~~~ 367 (513)
.+++|++++ .++++++.||.|++||+++++... ...+..|...+.+++|+| .+++++ |+...++..
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~- 262 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA- 262 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC-
T ss_pred EEEEEccCCCceeeeeccCCceEEEECCCCceee-eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEe-
Confidence 999999988 589999999999999999887654 445567888999999998 455665 888776643
Q ss_pred eeEee-cCCCceEEEEEcCCC-CEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcC-CCCEEEEEeCCCc
Q 037288 368 SHTTF-MPSSISCLQSLQLYD-QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQ-SERFVMSGGEDCK 444 (513)
Q Consensus 368 ~~~~~-~~~~v~~~~~~~~~~-~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~-~g~~l~sg~~Dg~ 444 (513)
..+. +...|.++ .|+|++ ++|++|+.|++|+|||++ ....+. ..+|.+.|+. ++|+| ++++|++|+.||+
T Consensus 263 -~~~~~~~~~v~~l-~~sp~~~~~lasgs~D~~i~iwd~~--~~~~~~-~~~H~~~V~~--vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 263 -QTSAVHSQNITGL-AYSYHSSPFLASISEDCTVAVLDAD--FSEVFR-DLSHRDFVTG--VAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp -EEECCCSSCEEEE-EECSSSSCCEEEEETTSCEEEECTT--SCEEEE-ECCCSSCEEE--EEECSSSTTEEEEEETTSC
T ss_pred -EEEeccceeEEEE-EEcCCCCCEEEEEeCCCEEEEEECC--CCcEeE-ECCCCCCEEE--EEEeCCCCCEEEEEcCCCe
Confidence 3343 45566665 777776 679999999999999996 333444 4579999877 89998 7999999999999
Q ss_pred EEEEeCCCCeE
Q 037288 445 LRIWSIRSGEL 455 (513)
Q Consensus 445 v~vwd~~~~~~ 455 (513)
|++|++.+...
T Consensus 336 v~iW~~~~~~~ 346 (357)
T 4g56_B 336 VLHHHLPSEGR 346 (357)
T ss_dssp EEEEECC----
T ss_pred EEEEECCCCCc
Confidence 99999976443
No 23
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=8.2e-29 Score=247.11 Aligned_cols=234 Identities=16% Similarity=0.157 Sum_probs=194.2
Q ss_pred eeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEEC
Q 037288 248 TMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 248 ~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~ 325 (513)
+...+.+|...|++++|+|++.+|++|+. ++|++||+.+++....+. |...|.+++|+|+|++|++|+.|+.|++||+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 56779999999999999999999998875 559999999998777666 7778999999999999999999999999999
Q ss_pred CCCcc----ccccccccccCcCeEEEeeCC----eEEEeE-------eecccCcccceeE----eecCCCceEEEEEcCC
Q 037288 326 RKRQR----GCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKANIWPSHT----TFMPSSISCLQSLQLY 386 (513)
Q Consensus 326 ~~~~~----~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~~~~~~~----~~~~~~v~~~~~~~~~ 386 (513)
..... ......+.+|...|.++.|.| .+++++ |+...++...... ..|...+.++.+.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence 75321 111456889999999999988 588877 9988776432211 2345677777665668
Q ss_pred CCEEEEEecCCeEEEEecCCCCc-cceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCC--
Q 037288 387 DQYFLASSMDGTVKLYDHRLTTR-GAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSN-- 463 (513)
Q Consensus 387 ~~~l~s~s~dg~i~lwd~~~~~~-~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~-- 463 (513)
+++|++|+.|+.|++||++ .. .++..+.+|...|.. ++|+|++++|++|+.||+|++||+++++++..+..+.
T Consensus 218 ~~~l~sgs~D~~v~~wd~~--~~~~~~~~~~~h~~~v~~--v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~ 293 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLR--ITSRAVRTYHGHEGDINS--VKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR 293 (380)
T ss_dssp CCEEEEEETTSCEEEEETT--TTCCCCEEECCCSSCCCE--EEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS
T ss_pred CCEEEEEECCCeEEEEECC--CCCcceEEECCcCCCeEE--EEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc
Confidence 9999999999999999997 33 378899999999988 8999999999999999999999999999998875542
Q ss_pred -----CCeEEEEEcCCCceEEeeCCCe
Q 037288 464 -----SVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 464 -----~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
..|++++|+|++.+++++..+-
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAGYSNG 320 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEECTTS
T ss_pred cccccCceEEEEECCCCCEEEEEECCC
Confidence 2489999999988887776553
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=3.2e-28 Score=234.33 Aligned_cols=233 Identities=10% Similarity=0.044 Sum_probs=182.5
Q ss_pred EEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCC--cEEEEe-eeCCCeEEEEEec--CCcEEEEEeCCCeEEEE
Q 037288 250 HLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETG--MASWVC-RSKSDILAQQVIH--SGNVVLCGFRNGAIVTV 323 (513)
Q Consensus 250 ~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~--~~~~~~-~~~~~V~~l~~~~--~~~~l~sg~~dg~i~iw 323 (513)
..+.+|...|++++|+|+|++|++|+. ++|+|||+.++ +.+..+ .|...|.+++|++ ++++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 457899999999999999999999875 55999999753 444444 4888999999986 48999999999999999
Q ss_pred ECCCCccccccccccccCcCeEEEeeCC-----eEEEeE-------eecccCccc-ceeEeecCCCceEEEEEcCC----
Q 037288 324 DVRKRQRGCSSRAGRRHRIPYSRLQRND-----RVTNEQ-------WFELKANIW-PSHTTFMPSSISCLQSLQLY---- 386 (513)
Q Consensus 324 d~~~~~~~~~~~~~~~h~~~v~~v~~~~-----~~~s~~-------w~~~~~~~~-~~~~~~~~~~v~~~~~~~~~---- 386 (513)
|+++++... +..+.+|...|.+++|+| .+++++ |+...+... ......|...+.++ .|+|+
T Consensus 83 d~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~-~~~p~~~~~ 160 (297)
T 2pm7_B 83 KEENGRWSQ-IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSA-SWAPATIEE 160 (297)
T ss_dssp EBSSSCBCC-CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEE-EECCCC---
T ss_pred EcCCCceEE-EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceE-eecCCcccc
Confidence 998775333 556788999999999987 467776 887765322 22223455566665 66765
Q ss_pred ---------CCEEEEEecCCeEEEEecCCCCcc--ceEEecCCCCceeEEEEEEcCCC---CEEEEEeCCCcEEEEeCCC
Q 037288 387 ---------DQYFLASSMDGTVKLYDHRLTTRG--AVQSYEGHVNSHTRIQLGVDQSE---RFVMSGGEDCKLRIWSIRS 452 (513)
Q Consensus 387 ---------~~~l~s~s~dg~i~lwd~~~~~~~--~~~~~~~h~~~v~~~~~~~s~~g---~~l~sg~~Dg~v~vwd~~~ 452 (513)
+++|++|+.|+.|++||++..... ...++.+|...|.. ++|+|++ .+|++|+.|++|+|||+.+
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~--v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD--VAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE--EEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEE--EEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 579999999999999999732211 56688999999877 8999984 8999999999999999987
Q ss_pred Ce---EEEEe--cCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 453 GE---LVFED--KFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 453 ~~---~~~~~--~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
+. ....+ ..|...|.+++|+|++.++|+++.|-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~ 277 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc
Confidence 53 22233 456788999999999888888777643
No 25
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=9.5e-28 Score=235.94 Aligned_cols=225 Identities=11% Similarity=0.076 Sum_probs=173.6
Q ss_pred EEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCC
Q 037288 250 HLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRK 327 (513)
Q Consensus 250 ~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 327 (513)
..+.+|...|.+++|+|++.++++|+ |++|++||+.+++.+..+. |...|.+++|+|++++|++|+.|++|++||+..
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 34788999999999999999999886 5569999999998876665 888899999999999999999999999999985
Q ss_pred CccccccccccccCcCeEEEeeCC-------------eEEEeE-------eecccCcccceeEe-ecCCCceEEEEEcCC
Q 037288 328 RQRGCSSRAGRRHRIPYSRLQRND-------------RVTNEQ-------WFELKANIWPSHTT-FMPSSISCLQSLQLY 386 (513)
Q Consensus 328 ~~~~~~~~~~~~h~~~v~~v~~~~-------------~~~s~~-------w~~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 386 (513)
..... .....+|...|.+++|+| .+++++ |+.. .. ....+ .|...+.++ .|+|+
T Consensus 150 ~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~--~~~~~~~h~~~v~~~-~~s~~ 224 (343)
T 2xzm_R 150 ECKFS-SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQ--IRYTFKAHESNVNHL-SISPN 224 (343)
T ss_dssp CEEEE-CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TE--EEEEEECCSSCEEEE-EECTT
T ss_pred Cceee-eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-Cc--eeEEEcCccccceEE-EECCC
Confidence 43322 334558999999999987 266666 7732 21 12233 345566665 88999
Q ss_pred CCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--Eec----
Q 037288 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVF--EDK---- 460 (513)
Q Consensus 387 ~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~--~~~---- 460 (513)
+++|++|+.||.|++||++. .......+. +...+.. ++|+|++.+|++| .|+.|++||+.+++... .+.
T Consensus 225 g~~l~sgs~dg~v~iwd~~~-~~~~~~~~~-~~~~v~~--v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~ 299 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILN-LTYPQREFD-AGSTINQ--IAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPI 299 (343)
T ss_dssp SSEEEEEETTCEEEEEESSC-CSSCSEEEE-CSSCEEE--EEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSG
T ss_pred CCEEEEEcCCCeEEEEECCC-Ccccceeec-CCCcEEE--EEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcc
Confidence 99999999999999999952 122444443 3444655 8999999887655 58889999998876543 433
Q ss_pred -------CCCCCeEEEEEcCCCceEEeeCCC
Q 037288 461 -------FSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 461 -------~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
.|...|.+++|+|++.++++++.|
T Consensus 300 ~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D 330 (343)
T 2xzm_R 300 TKAEGQKGKNPQCTSLAWNALGKKLFAGFTD 330 (343)
T ss_dssp GGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred hhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence 567789999999998777776655
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=1.3e-27 Score=232.43 Aligned_cols=225 Identities=8% Similarity=0.069 Sum_probs=183.8
Q ss_pred eEEeccccCcEEEEEEcCCC-CEEEEEeC-CeEEEEECCCC-----cEEEEe-eeCCCeEEEEEecCCcEEEEEeCCCeE
Q 037288 249 MHLVASFKCTVWTADFCTNP-SQAVIGTN-LGAAMVDMETG-----MASWVC-RSKSDILAQQVIHSGNVVLCGFRNGAI 320 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g-~~l~s~s~-~~i~vwd~~~~-----~~~~~~-~~~~~V~~l~~~~~~~~l~sg~~dg~i 320 (513)
..++.+|.+.|++++|+|++ ++|++|+. ++|++||+... .++..+ .|...|.+++|+|++++|++|+.|++|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 35689999999999999965 78888865 55999998642 233344 488889999999999999999999999
Q ss_pred EEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEeecCCCceEEEEEcC-----
Q 037288 321 VTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQL----- 385 (513)
Q Consensus 321 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 385 (513)
++||+.+++. +..+.+|...|.+++|++ .+++++ |+...... .....+...+.++ .+.|
T Consensus 90 ~~wd~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~--~~~~~h~~~v~~~-~~~~~~~~~ 163 (319)
T 3frx_A 90 RLWDVATGET---YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCL--ATLLGHNDWVSQV-RVVPNEKAD 163 (319)
T ss_dssp EEEETTTTEE---EEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEE--EEECCCSSCEEEE-EECCC----
T ss_pred EEEECCCCCe---eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE--EEEeccCCcEEEE-EEccCCCCC
Confidence 9999998876 458899999999999998 677777 88754321 1222345566665 5555
Q ss_pred -CCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCC
Q 037288 386 -YDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNS 464 (513)
Q Consensus 386 -~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~ 464 (513)
++..|++++.|+.|++||++ .......+.+|...+.. ++|+|+|++|++|+.||.|++||+.+++++..+..+ .
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~--~~~~~~~~~~h~~~v~~--~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~ 238 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLN--QFQIEADFIGHNSNINT--LTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-D 238 (319)
T ss_dssp --CCEEEEEETTSCEEEEETT--TTEEEEEECCCCSCEEE--EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-S
T ss_pred CCccEEEEEeCCCEEEEEECC--cchhheeecCCCCcEEE--EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-C
Confidence 45589999999999999997 55577889999999877 899999999999999999999999999999998764 5
Q ss_pred CeEEEEEcCCCceEEeeCCC
Q 037288 465 VPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 465 ~v~~v~~~p~~~~~~t~~~~ 484 (513)
.|.+++|+|++.+++++..+
T Consensus 239 ~v~~~~~sp~~~~la~~~~~ 258 (319)
T 3frx_A 239 EVFSLAFSPNRYWLAAATAT 258 (319)
T ss_dssp CEEEEEECSSSSEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEcCC
Confidence 79999999998777766554
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=2.7e-28 Score=240.10 Aligned_cols=234 Identities=12% Similarity=0.090 Sum_probs=186.5
Q ss_pred eeEEeccccC-cEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEE--E--eeeCCCeEEEEEecCCcEEEEEeCCCeEE
Q 037288 248 TMHLVASFKC-TVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASW--V--CRSKSDILAQQVIHSGNVVLCGFRNGAIV 321 (513)
Q Consensus 248 ~~~~~~~h~~-~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~--~--~~~~~~V~~l~~~~~~~~l~sg~~dg~i~ 321 (513)
.+..+.+|.. .|++++|+|+|++||+|+. +.|+|||+.++.... . ..|...|.+++|+|++++|++|+.|++|+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 3566889988 9999999999999998865 569999998876332 2 23788899999999999999999999999
Q ss_pred EEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCccc-ceeEe-ecCCCceEEEEEcCCCCE
Q 037288 322 TVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIW-PSHTT-FMPSSISCLQSLQLYDQY 389 (513)
Q Consensus 322 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~ 389 (513)
+||+....... +..+.+|..+|.+++|+| .+++++ |+...+... ....+ .+...+.++ .|+|++++
T Consensus 87 iw~~~~~~~~~-~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~-~~~p~~~~ 164 (345)
T 3fm0_A 87 IWKKNQDDFEC-VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV-VWHPSQEL 164 (345)
T ss_dssp EEEECCC-EEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEE-EECSSSSC
T ss_pred EEEccCCCeEE-EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEE-EECCCCCE
Confidence 99998775444 568899999999999998 677777 888765422 22233 344556664 78999999
Q ss_pred EEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---------------e
Q 037288 390 FLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSG---------------E 454 (513)
Q Consensus 390 l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~---------------~ 454 (513)
|++++.|+.|++||++.....+..++.+|...|.. ++|+|+|++|++|+.|++|+||+.... +
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~--l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWS--LAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE--EEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEE--EEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 99999999999999872222256789999999877 899999999999999999999996321 3
Q ss_pred EEEEecC-CCCCeEEEEEcCCCceEEeeCCCe
Q 037288 455 LVFEDKF-SNSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 455 ~~~~~~~-~~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
++..+.. |...|.+++|+|++..+++.+.|-
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~ 274 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDD 274 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTCCEEEEETTS
T ss_pred eeEEecCCCCCcEEEEEEecCCCEEEEEeCCC
Confidence 4445544 788899999999977777766653
No 28
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.7e-28 Score=243.39 Aligned_cols=196 Identities=8% Similarity=0.050 Sum_probs=160.2
Q ss_pred ccccCcEEEEEEcCCCCEEEEEe---CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCc
Q 037288 253 ASFKCTVWTADFCTNPSQAVIGT---NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQ 329 (513)
Q Consensus 253 ~~h~~~V~~~~~s~~g~~l~s~s---~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 329 (513)
..+...+.+++|+|||+++++++ |++|+|||+.+++++..+.|...|.+++|+|||++|++++.| .+.+|+..++.
T Consensus 130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~ 208 (365)
T 4h5i_A 130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGS 208 (365)
T ss_dssp CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCC
T ss_pred CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCc
Confidence 34556799999999999987553 456999999999999989999999999999999999999855 56666666665
Q ss_pred cccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCC----eEEEEecC
Q 037288 330 RGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDG----TVKLYDHR 405 (513)
Q Consensus 330 ~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg----~i~lwd~~ 405 (513)
... .....+|...|.++ .|+|+++++++++.|+ .+++||+.
T Consensus 209 ~~~-~~~~~~~~~~v~~v----------------------------------~fspdg~~l~~~s~d~~~~~~i~~~~~~ 253 (365)
T 4h5i_A 209 CIA-RKTDFDKNWSLSKI----------------------------------NFIADDTVLIAASLKKGKGIVLTKISIK 253 (365)
T ss_dssp EEE-EECCCCTTEEEEEE----------------------------------EEEETTEEEEEEEESSSCCEEEEEEEEE
T ss_pred cee-eeecCCCCCCEEEE----------------------------------EEcCCCCEEEEEecCCcceeEEeecccc
Confidence 433 23455666666663 5667999999999887 68889986
Q ss_pred CCCcc--ceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe-cCCCCCeEEEEEcCCCceEEeeC
Q 037288 406 LTTRG--AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFED-KFSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 406 ~~~~~--~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
..... ....+.+|...|++ ++|+|+|++|++|+.|++|+|||+.+++++..+ ..|..+|++|+|+|++.+|||++
T Consensus 254 ~~~~~~~~~~~~~~~~~~V~~--~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S 331 (365)
T 4h5i_A 254 SGNTSVLRSKQVTNRFKGITS--MDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVS 331 (365)
T ss_dssp TTEEEEEEEEEEESSCSCEEE--EEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEE
T ss_pred cceecceeeeeecCCCCCeEe--EEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEe
Confidence 22222 34567889999877 899999999999999999999999999999885 78999999999999999999988
Q ss_pred CCee
Q 037288 483 GKIH 486 (513)
Q Consensus 483 ~~~~ 486 (513)
.|-.
T Consensus 332 ~D~t 335 (365)
T 4h5i_A 332 AANT 335 (365)
T ss_dssp TTSE
T ss_pred CCCe
Confidence 8855
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=7.5e-28 Score=234.20 Aligned_cols=210 Identities=9% Similarity=0.093 Sum_probs=170.6
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCC-eEEEEECCCCcEEEEeeeCCCe
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNL-GAAMVDMETGMASWVCRSKSDI 299 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~-~i~vwd~~~~~~~~~~~~~~~V 299 (513)
..+|.+.+|++.+.. .+..+.+|...|.+++|+|++.++++|+.+ .|++||+..........|...|
T Consensus 84 s~D~~v~~wd~~~~~------------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v 151 (319)
T 3frx_A 84 SWDKTLRLWDVATGE------------TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWV 151 (319)
T ss_dssp ETTSEEEEEETTTTE------------EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCE
T ss_pred eCCCEEEEEECCCCC------------eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcE
Confidence 357888888876432 356688999999999999999999988755 5999999866555556688889
Q ss_pred EEEEEecC------CcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeec
Q 037288 300 LAQQVIHS------GNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFM 373 (513)
Q Consensus 300 ~~l~~~~~------~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~ 373 (513)
.+++|+|. +..|++|+.|+.|++||++..+. ...+.+|..+|.++
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~---~~~~~~h~~~v~~~-------------------------- 202 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI---EADFIGHNSNINTL-------------------------- 202 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTEE---EEEECCCCSCEEEE--------------------------
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh---heeecCCCCcEEEE--------------------------
Confidence 99999984 45899999999999999988765 33677888888874
Q ss_pred CCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 037288 374 PSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSG 453 (513)
Q Consensus 374 ~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~ 453 (513)
.++|++++|++|+.||.|++||++ ...++..+..+ ..+.. ++|+|++.+|++++.+ .+++|++..+
T Consensus 203 --------~~sp~g~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~-~~v~~--~~~sp~~~~la~~~~~-~i~v~~~~~~ 268 (319)
T 3frx_A 203 --------TASPDGTLIASAGKDGEIMLWNLA--AKKAMYTLSAQ-DEVFS--LAFSPNRYWLAAATAT-GIKVFSLDPQ 268 (319)
T ss_dssp --------EECTTSSEEEEEETTCEEEEEETT--TTEEEEEEECC-SCEEE--EEECSSSSEEEEEETT-EEEEEEETTE
T ss_pred --------EEcCCCCEEEEEeCCCeEEEEECC--CCcEEEEecCC-CcEEE--EEEcCCCCEEEEEcCC-CcEEEEeCcC
Confidence 456799999999999999999997 55577777754 45655 8999999999988755 5999999998
Q ss_pred eEEEEecC--------CCCCeEEEEEcCCCceEEeeCCCe
Q 037288 454 ELVFEDKF--------SNSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 454 ~~~~~~~~--------~~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
..+..+.. +...+.+++|+|++.++++++.|-
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg 308 (319)
T 3frx_A 269 YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDN 308 (319)
T ss_dssp EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCc
Confidence 88777642 356789999999998888877663
No 30
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=3.9e-27 Score=232.65 Aligned_cols=231 Identities=15% Similarity=0.156 Sum_probs=191.0
Q ss_pred eeEEeccccCcEEEEEEcCCCCEEEEEeCC-eEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEEC
Q 037288 248 TMHLVASFKCTVWTADFCTNPSQAVIGTNL-GAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 248 ~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~-~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~ 325 (513)
....+.+|...|++++|+|++.+|++|+.+ +|++||..+++....+. +...|.+++|+|+|..|++|+.|+.+++|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 356789999999999999999999998755 59999999988766665 6677999999999999999999999999998
Q ss_pred CCCccc---cccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEee-cCCCceEEEEEcC--CCCE
Q 037288 326 RKRQRG---CSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTF-MPSSISCLQSLQL--YDQY 389 (513)
Q Consensus 326 ~~~~~~---~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~--~~~~ 389 (513)
...... .....+.+|...|.++.|++ .+++++ |++..++.. ..+. |...+.++ .+++ ++++
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~--~~~~~h~~~v~~~-~~~~~~~g~~ 212 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL--QSFHGHGADVLCL-DLAPSETGNT 212 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEE-EECCCSSCCE
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE--EEEcCCCCCeEEE-EEEeCCCCCE
Confidence 754211 11346778999999999998 678877 998877643 3343 45566665 5544 5789
Q ss_pred EEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCC--CCCeE
Q 037288 390 FLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFS--NSVPS 467 (513)
Q Consensus 390 l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~--~~~v~ 467 (513)
|++|+.||.|++||++ ...++..+.+|...|.. ++|+|++.+|++|+.|++|++||+++++.+..+..+ ...+.
T Consensus 213 l~sgs~Dg~v~~wd~~--~~~~~~~~~~h~~~v~~--v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~ 288 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMR--SGQCVQAFETHESDVNS--VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGAS 288 (354)
T ss_dssp EEEEETTSCEEEEETT--TCCEEEEECCCSSCEEE--EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEE
T ss_pred EEEEeCCCeEEEEECC--CCcEEEEecCCCCCeEE--EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccccee
Confidence 9999999999999998 55688999999999877 899999999999999999999999999888776543 34689
Q ss_pred EEEEcCCCceEEeeCCCe
Q 037288 468 AVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 468 ~v~~~p~~~~~~t~~~~~ 485 (513)
+++|+|++.++++++.|-
T Consensus 289 ~~~~s~~g~~l~~g~~d~ 306 (354)
T 2pbi_B 289 SVDFSLSGRLLFAGYNDY 306 (354)
T ss_dssp EEEECTTSSEEEEEETTS
T ss_pred EEEEeCCCCEEEEEECCC
Confidence 999999988888776653
No 31
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1.3e-27 Score=239.60 Aligned_cols=225 Identities=15% Similarity=0.144 Sum_probs=186.3
Q ss_pred eccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeC-------------------CCeEEEEEecCCcEEE
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSK-------------------SDILAQQVIHSGNVVL 312 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~-------------------~~V~~l~~~~~~~~l~ 312 (513)
..+|...|.+++|+|+|++||+|+++++++|++.+++.+..+... ..|.+++|+|+|++|+
T Consensus 60 ~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 60 SLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp EEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred ecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 347999999999999999999999989999999999877665421 1389999999999999
Q ss_pred EEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEeecCCCceEEEE
Q 037288 313 CGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQS 382 (513)
Q Consensus 313 sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~ 382 (513)
+|+.|+.|++||+.+++. +..+.+|...|.+++|+| .+++++ |+...++. ...+.+...+.++ .
T Consensus 140 s~~~d~~i~iwd~~~~~~---~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~~~~v~~~-~ 213 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKI---VMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC--SLTLSIEDGVTTV-A 213 (393)
T ss_dssp EEETTSCEEEEETTTTEE---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEE-E
T ss_pred EEcCCCeEEEEECCCCcE---EEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee--EEEEEcCCCcEEE-E
Confidence 999999999999998875 447899999999999998 677776 99887664 3445566677776 5
Q ss_pred EcC-CCCEEEEEecCCeEEEEecCCCCccceEEe-------cCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-
Q 037288 383 LQL-YDQYFLASSMDGTVKLYDHRLTTRGAVQSY-------EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSG- 453 (513)
Q Consensus 383 ~~~-~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~-------~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~- 453 (513)
++| ++++|++|+.|+.|++||++ ....+..+ .+|...|.. ++|+|+|++|++|+.|+.|++||+.+.
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~--~~~~~~~~~~~~~~~~~h~~~v~~--v~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSE--TGFLVERLDSENESGTGHKDSVYS--VVFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETT--TCCEEEEEC------CCCSSCEEE--EEECTTSSEEEEEETTSEEEEEEC----
T ss_pred EECCCCCEEEEEcCCCcEEEEECC--CCcEEEeecccccCCCCCCCCEEE--EEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 555 89999999999999999997 44455555 578888877 899999999999999999999999763
Q ss_pred -----------eEEEEecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 454 -----------ELVFEDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 454 -----------~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
.+...+..|...|.+++|+|++.++++++.|-.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 333 (393)
T 1erj_A 290 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 333 (393)
T ss_dssp -----------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred CcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe
Confidence 345667788999999999999888888776643
No 32
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-28 Score=247.01 Aligned_cols=246 Identities=14% Similarity=0.149 Sum_probs=191.8
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCC-CCEEEEEe-CCeEEEEECCCCc------EEEE-
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTN-PSQAVIGT-NLGAAMVDMETGM------ASWV- 292 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~-g~~l~s~s-~~~i~vwd~~~~~------~~~~- 292 (513)
.+|.+.+|++...... ...+..+.+|...|.+++|+|+ +.+|++++ |+.|++||+.+++ ....
T Consensus 87 ~dg~v~vw~~~~~~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 158 (416)
T 2pm9_A 87 DNGSLELYSTNEANNA--------INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP 158 (416)
T ss_dssp SSSCEEEECCSSTTSC--------CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC
T ss_pred cCCeEEEeeccccccc--------ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccc
Confidence 4688888887742211 1245678899999999999998 88888886 4569999999876 3322
Q ss_pred ---eeeCCCeEEEEEecC-CcEEEEEeCCCeEEEEECCCCcccccccccccc------CcCeEEEeeCC----eEEEeE-
Q 037288 293 ---CRSKSDILAQQVIHS-GNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRH------RIPYSRLQRND----RVTNEQ- 357 (513)
Q Consensus 293 ---~~~~~~V~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h------~~~v~~v~~~~----~~~s~~- 357 (513)
..|...|.+++|+|+ +.+|++|+.||.|++||++..+... .+..| ...|.+++|+| .+++++
T Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 159 GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI---HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE---EECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce---EEeccccccccCCceEEEEECCCCCCEEEEEEC
Confidence 247788999999999 6899999999999999999887543 44444 88999999998 455554
Q ss_pred ---------eecccCcccceeEe--ecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEE
Q 037288 358 ---------WFELKANIWPSHTT--FMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRI 425 (513)
Q Consensus 358 ---------w~~~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~ 425 (513)
|+...+.. +...+ .+...+.++ .|+| ++++|++++.||.|++||++ ...++..+.+|...+..
T Consensus 236 d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~-~~s~~~~~~l~s~~~dg~v~~wd~~--~~~~~~~~~~~~~~v~~- 310 (416)
T 2pm9_A 236 SDNDPSILIWDLRNANT-PLQTLNQGHQKGILSL-DWCHQDEHLLLSSGRDNTVLLWNPE--SAEQLSQFPARGNWCFK- 310 (416)
T ss_dssp CSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEE-EECSSCSSCEEEEESSSEEEEECSS--SCCEEEEEECSSSCCCC-
T ss_pred CCCCceEEEEeCCCCCC-CcEEeecCccCceeEE-EeCCCCCCeEEEEeCCCCEEEeeCC--CCccceeecCCCCceEE-
Confidence 66665432 22333 356677776 6777 99999999999999999997 55688899999999877
Q ss_pred EEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEec-----------------------------------CCCCCeEEE
Q 037288 426 QLGVDQSE-RFVMSGGEDCKLRIWSIRSGELVFEDK-----------------------------------FSNSVPSAV 469 (513)
Q Consensus 426 ~~~~s~~g-~~l~sg~~Dg~v~vwd~~~~~~~~~~~-----------------------------------~~~~~v~~v 469 (513)
++|+|++ .+|++++.||.|++||+.+++...... .+..+++++
T Consensus 311 -~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (416)
T 2pm9_A 311 -TKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAA 389 (416)
T ss_dssp -EEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCC
T ss_pred -EEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccce
Confidence 8999998 899999999999999998765322111 156678899
Q ss_pred EEcCCCceEEeeCCC
Q 037288 470 CWRTQRSMGPQIEGK 484 (513)
Q Consensus 470 ~~~p~~~~~~t~~~~ 484 (513)
+|+|++.++++++.|
T Consensus 390 ~~s~dg~~la~~~~d 404 (416)
T 2pm9_A 390 HWAFGGKLVQITPDG 404 (416)
T ss_dssp EEETTTEEECBCTTS
T ss_pred EEeeCCeEEEEeCCC
Confidence 999999998888765
No 33
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=2.1e-27 Score=239.56 Aligned_cols=249 Identities=11% Similarity=0.081 Sum_probs=187.1
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCe
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDI 299 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V 299 (513)
.+|.+.+|++.+. .....+.+|...|.+++|+|++++|++|+. +.|++||+.+++.+..+. |...|
T Consensus 117 ~dg~i~iwd~~~~------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v 184 (420)
T 3vl1_A 117 TEGDIKVLDSNFN------------LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV 184 (420)
T ss_dssp TTSCEEEECTTSC------------EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE
T ss_pred CCCCEEEEeCCCc------------ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE
Confidence 4677888876532 224456799999999999999999998875 559999999988766665 88889
Q ss_pred EEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEe---------------------eCC---eEEE
Q 037288 300 LAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQ---------------------RND---RVTN 355 (513)
Q Consensus 300 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~---------------------~~~---~~~s 355 (513)
.+++|+|++++|++|+.||.|++||+++++....+.....|...|.++. |+| .+++
T Consensus 185 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 185 TDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE
T ss_pred EEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE
Confidence 9999999999999999999999999998876442223234445555544 455 5666
Q ss_pred eE-------eecccCcccceeEeecCCCceEEEEEcCCCC-EEEEEecCCeEEEEecCCCCcc-ceEEecC-CCCceeEE
Q 037288 356 EQ-------WFELKANIWPSHTTFMPSSISCLQSLQLYDQ-YFLASSMDGTVKLYDHRLTTRG-AVQSYEG-HVNSHTRI 425 (513)
Q Consensus 356 ~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~s~dg~i~lwd~~~~~~~-~~~~~~~-h~~~v~~~ 425 (513)
++ |+...+.........+...+.++ .++|++. +|++|+.||.|++||++ ... ++..+.+ |...+..
T Consensus 265 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~~g~~dg~i~vwd~~--~~~~~~~~~~~~~~~~v~~- 340 (420)
T 3vl1_A 265 GHVSGVITVHNVFSKEQTIQLPSKFTCSCNSL-TVDGNNANYIYAGYENGMLAQWDLR--SPECPVGEFLINEGTPINN- 340 (420)
T ss_dssp EETTSCEEEEETTTCCEEEEECCTTSSCEEEE-EECSSCTTEEEEEETTSEEEEEETT--CTTSCSEEEEESTTSCEEE-
T ss_pred EcCCCeEEEEECCCCceeEEcccccCCCceeE-EEeCCCCCEEEEEeCCCeEEEEEcC--CCcCchhhhhccCCCCceE-
Confidence 65 88877664322222345567765 7788888 99999999999999997 433 5777776 5555554
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCe---------EEEEecCCCCCeEEEEEcCCCc----eEEeeCCCeeee
Q 037288 426 QLGVDQSERFVMSGGEDCKLRIWSIRSGE---------LVFEDKFSNSVPSAVCWRTQRS----MGPQIEGKIHEE 488 (513)
Q Consensus 426 ~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~---------~~~~~~~~~~~v~~v~~~p~~~----~~~t~~~~~~~~ 488 (513)
+ +.+++++|++++.||.|++|++.... ....+..+...|.+++|+|++. +++++..+....
T Consensus 341 -~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~ 414 (420)
T 3vl1_A 341 -V-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCAL 414 (420)
T ss_dssp -E-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEE
T ss_pred -E-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEE
Confidence 4 44678899999999999999988731 1223456778899999999966 788887776653
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=1.6e-26 Score=225.29 Aligned_cols=243 Identities=13% Similarity=0.138 Sum_probs=195.9
Q ss_pred CccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCc--EEEEe-eeCCC
Q 037288 223 GGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGM--ASWVC-RSKSD 298 (513)
Q Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~--~~~~~-~~~~~ 298 (513)
+|.+.+|++.+...... .......+|...|.+++|+|+++++++++. +.|++||+.+++ ....+ .|...
T Consensus 71 dg~i~iw~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 143 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSP-------VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPA 143 (337)
T ss_dssp BSEEEEEETTSTTCCSC-------SEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSC
T ss_pred CCeEEEEECCCCCceee-------eecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCc
Confidence 68899998875443211 011223378999999999999999998864 569999999887 33333 36778
Q ss_pred eEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccce
Q 037288 299 ILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPS 368 (513)
Q Consensus 299 V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~ 368 (513)
|.+++|+|++++|++++.||.|++||+++++. +..+.+|...|.+++|+| .+++++ |+...++..
T Consensus 144 i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-- 218 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCCSDGNIAVWDLHNQTL---VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL-- 218 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCce---eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceE--
Confidence 99999999999999999999999999998865 447888999999999998 666665 888776543
Q ss_pred eEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEE
Q 037288 369 HTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIW 448 (513)
Q Consensus 369 ~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vw 448 (513)
..+.+...+.++ .++|++++|++++.|+.|++||++ ......+..|...+.. ++|+|++++|++++.||.|++|
T Consensus 219 ~~~~~~~~v~~~-~~s~~~~~l~~~~~~~~i~~~~~~---~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 219 QQHDFTSQIFSL-GYCPTGEWLAVGMESSNVEVLHVN---KPDKYQLHLHESCVLS--LKFAYCGKWFVSTGKDNLLNAW 292 (337)
T ss_dssp EEEECSSCEEEE-EECTTSSEEEEEETTSCEEEEETT---SSCEEEECCCSSCEEE--EEECTTSSEEEEEETTSEEEEE
T ss_pred eeecCCCceEEE-EECCCCCEEEEEcCCCcEEEEECC---CCCeEEEcCCccceeE--EEECCCCCEEEEecCCCcEEEE
Confidence 345566677775 788999999999999999999996 3345567889988877 8999999999999999999999
Q ss_pred eCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 449 SIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 449 d~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
|+.+++.+.... |...+.+++|+|++.++++++.+
T Consensus 293 ~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 293 RTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETT
T ss_pred ECCCCeEEEEec-CCCcEEEEEECCCCCEEEEecCC
Confidence 999999886654 57789999999998777766655
No 35
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-26 Score=233.01 Aligned_cols=238 Identities=12% Similarity=0.101 Sum_probs=193.8
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCC-
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSD- 298 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~- 298 (513)
.+|.+.+|+.. ...+..+.+|...|.+++|+|++.+|++++. +.|++||+.+++.+..+. +...
T Consensus 128 ~dg~i~i~~~~-------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 194 (425)
T 1r5m_A 128 ENGELRLWNKT-------------GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGG 194 (425)
T ss_dssp TTSCEEEEETT-------------SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----
T ss_pred CCCeEEEEeCC-------------CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCc
Confidence 46778888722 1135668899999999999999999988864 569999999998877666 3333
Q ss_pred --------------eEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE----
Q 037288 299 --------------ILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ---- 357 (513)
Q Consensus 299 --------------V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~---- 357 (513)
+.+++|++++ .+++++.||.|++||++..+. +..+..|..+|.+++|+| .+++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 270 (425)
T 1r5m_A 195 SSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTP---TGKLIGHHGPISVLEFNDTNKLLLSASDDGT 270 (425)
T ss_dssp -----------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSC---SEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred cceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCce---eeeeccCCCceEEEEECCCCCEEEEEcCCCE
Confidence 8999999875 588889999999999998865 447789999999999998 566666
Q ss_pred ---eecccCcccceeEee-cCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCC
Q 037288 358 ---WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE 433 (513)
Q Consensus 358 ---w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g 433 (513)
|+...+... ..+. +...+.++ .++|++ +|++++.|+.|++||++ ....+..+..|...+.. ++|+|++
T Consensus 271 i~i~d~~~~~~~--~~~~~~~~~i~~~-~~~~~~-~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~i~~--~~~s~~~ 342 (425)
T 1r5m_A 271 LRIWHGGNGNSQ--NCFYGHSQSIVSA-SWVGDD-KVISCSMDGSVRLWSLK--QNTLLALSIVDGVPIFA--GRISQDG 342 (425)
T ss_dssp EEEECSSSBSCS--EEECCCSSCEEEE-EEETTT-EEEEEETTSEEEEEETT--TTEEEEEEECTTCCEEE--EEECTTS
T ss_pred EEEEECCCCccc--eEecCCCccEEEE-EECCCC-EEEEEeCCCcEEEEECC--CCcEeEecccCCccEEE--EEEcCCC
Confidence 887765533 3333 45566665 677888 99999999999999997 55588888899988877 8999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCe--------------------EEEEecCCCC--CeEEEEEcCCCceEEeeCCC
Q 037288 434 RFVMSGGEDCKLRIWSIRSGE--------------------LVFEDKFSNS--VPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 434 ~~l~sg~~Dg~v~vwd~~~~~--------------------~~~~~~~~~~--~v~~v~~~p~~~~~~t~~~~ 484 (513)
++|++++.||.|++||+.+++ ++..+..|.. .|++++|+|++.++++++.+
T Consensus 343 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 415 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL 415 (425)
T ss_dssp SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS
T ss_pred CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC
Confidence 999999999999999999988 8889988866 99999999998777766655
No 36
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=6.4e-27 Score=229.99 Aligned_cols=225 Identities=12% Similarity=0.149 Sum_probs=177.4
Q ss_pred eEEeccccCcEEEEEE-----cC-CCCEEEEEeC-CeEEEEECCCC-------cEEEEe-eeCCCeEEEEEecCCcEEEE
Q 037288 249 MHLVASFKCTVWTADF-----CT-NPSQAVIGTN-LGAAMVDMETG-------MASWVC-RSKSDILAQQVIHSGNVVLC 313 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~-----s~-~g~~l~s~s~-~~i~vwd~~~~-------~~~~~~-~~~~~V~~l~~~~~~~~l~s 313 (513)
...+.+|.+.|++++| ++ ++.+|++|+. ++|++||+.++ .+...+ .|...|.+++|+|++.+|++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 4568999999999999 76 8999999875 55999998754 233333 48888999999999999999
Q ss_pred EeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeE-eecCCCceEEEE
Q 037288 314 GFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHT-TFMPSSISCLQS 382 (513)
Q Consensus 314 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~-~~~~~~v~~~~~ 382 (513)
|+.|++|++||+++++. +..+.+|...|.+++|+| .+++++ |+........... ..+...+.++ .
T Consensus 94 ~s~D~~v~lwd~~~~~~---~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~-~ 169 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTT---YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCV-R 169 (343)
T ss_dssp EETTSEEEEEETTSSCE---EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEE-E
T ss_pred EcCCCcEEEEECCCCcE---EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeee-e
Confidence 99999999999998875 458899999999999998 677776 8876322111000 0234455554 6
Q ss_pred EcCCC----------CEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 037288 383 LQLYD----------QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRS 452 (513)
Q Consensus 383 ~~~~~----------~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~ 452 (513)
++|++ .+|++++.|+.|++||. .......+.+|...+.. ++|+|+|++|++|+.||.|++||+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~---~~~~~~~~~~h~~~v~~--~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNT---NFQIRYTFKAHESNVNH--LSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEET---TTEEEEEEECCSSCEEE--EEECTTSSEEEEEETTCEEEEEESSC
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEcC---CCceeEEEcCccccceE--EEECCCCCEEEEEcCCCeEEEEECCC
Confidence 77765 79999999999999995 44577788999999877 89999999999999999999999954
Q ss_pred -CeEEEEecCCCCCeEEEEEcCCCceEEeeCC
Q 037288 453 -GELVFEDKFSNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 453 -~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
..+...+. +...|.+++|+|++.+++++..
T Consensus 245 ~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d 275 (343)
T 2xzm_R 245 LTYPQREFD-AGSTINQIAFNPKLQWVAVGTD 275 (343)
T ss_dssp CSSCSEEEE-CSSCEEEEEECSSSCEEEEEES
T ss_pred Ccccceeec-CCCcEEEEEECCCCCEEEEECC
Confidence 44444443 3556999999999776665543
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=2e-27 Score=234.52 Aligned_cols=235 Identities=8% Similarity=0.072 Sum_probs=172.2
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcC-CCCEEEEEeC-CeEEEEECCCCcEEEEe----ee
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT-NPSQAVIGTN-LGAAMVDMETGMASWVC----RS 295 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~-~g~~l~s~s~-~~i~vwd~~~~~~~~~~----~~ 295 (513)
.+|.+.+|++.+.. .+..+.+|...|.+++|+| ++.+|++|+. +.|++||+.+++....+ .|
T Consensus 93 ~dg~i~v~d~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 160 (366)
T 3k26_A 93 SRGIIRIINPITMQ------------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGH 160 (366)
T ss_dssp TTCEEEEECTTTCC------------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSC
T ss_pred CCCEEEEEEchhce------------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccc
Confidence 57788888876432 3456789999999999999 9999998875 56999999999988876 48
Q ss_pred CCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeEeecccCcccce-eEe
Q 037288 296 KSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQWFELKANIWPS-HTT 371 (513)
Q Consensus 296 ~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~w~~~~~~~~~~-~~~ 371 (513)
...|.+++|+|++++|++|+.||.|++||+++.+... .+..+ +.+++ .+...... ...... ...
T Consensus 161 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~ 228 (366)
T 3k26_A 161 RDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMN---AIKES------YDYNPNKTNRPFISQK---IHFPDFSTRD 228 (366)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHH---HHHHH------HTCCGGGCSSCCCCEE---ECCCSEEECS
T ss_pred cCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccc---cccee------EEecCCCCccccccee---eccCcccccc
Confidence 8889999999999999999999999999998765432 22110 00000 00000000 000000 011
Q ss_pred ecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCc------------cceEEecCCCCceeEEEEEEcCC--CCEEE
Q 037288 372 FMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTR------------GAVQSYEGHVNSHTRIQLGVDQS--ERFVM 437 (513)
Q Consensus 372 ~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~------------~~~~~~~~h~~~v~~~~~~~s~~--g~~l~ 437 (513)
.+...+.++ .++ +++|++++.|+.|++||++.... ..+..+.+|...+.. ++|+|+ +++|+
T Consensus 229 ~~~~~v~~~-~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~~~~~~l~ 303 (366)
T 3k26_A 229 IHRNYVDCV-RWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWY--MRFSMDFWQKMLA 303 (366)
T ss_dssp SCSSCCCEE-EEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSC--CCCEECTTSSEEE
T ss_pred CCcceEEEE-EEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEE--EEEcCCCCCcEEE
Confidence 144556665 344 77999999999999999974322 237788889988888 677777 99999
Q ss_pred EEeCCCcEEEEeCCCCe----EEEEecCC--CCCeEEEEEcCCCceEEeeCCCe
Q 037288 438 SGGEDCKLRIWSIRSGE----LVFEDKFS--NSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 438 sg~~Dg~v~vwd~~~~~----~~~~~~~~--~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
+|+.||.|++||+.+++ ....+..| ...|++++|+|++.++++++.|-
T Consensus 304 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 357 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA 357 (366)
T ss_dssp EECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred EEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCC
Confidence 99999999999999875 44567776 68999999999988888877663
No 38
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=8.5e-26 Score=218.65 Aligned_cols=228 Identities=11% Similarity=0.073 Sum_probs=185.1
Q ss_pred eEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 249 MHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
...+.+|...|.+++|+|++++|++|+. +.|++||+.+++....+. |...|.+++|+|++++|++|+.|+.|++||++
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 4568899999999999999999998864 569999999998776665 77889999999999999999999999999999
Q ss_pred CCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEee-cCCCceEEEEEcCCCCEEEEEec
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLASSM 395 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~ 395 (513)
+++. +..+.+|...|.+++|+| .+++++ |+...++. ...+. +...+.++ .+++++++|++++.
T Consensus 96 ~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~-~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 96 SGKC---LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAV-HFNRDGSLIVSSSY 169 (312)
T ss_dssp TCCE---EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEE-EECTTSSEEEEEET
T ss_pred CCcE---EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE--EEEecCCCCcEEEE-EEcCCCCEEEEEeC
Confidence 8875 458889999999999998 677776 88877653 23333 34456654 78899999999999
Q ss_pred CCeEEEEecCCCCccceEEec-CCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeE--EEEEc
Q 037288 396 DGTVKLYDHRLTTRGAVQSYE-GHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPS--AVCWR 472 (513)
Q Consensus 396 dg~i~lwd~~~~~~~~~~~~~-~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~--~v~~~ 472 (513)
||.|++||++ ....+..+. .+...+.. ++|+|++++|++++.||.|++||+.+++++..+..|...+. ...++
T Consensus 170 d~~i~~wd~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 170 DGLCRIWDTA--SGQCLKTLIDDDNPPVSF--VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp TSCEEEEETT--TCCEEEEECCSSCCCEEE--EEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred CCcEEEEECC--CCceeeEEeccCCCceEE--EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 9999999997 455666554 45556655 89999999999999999999999999999999887765432 23343
Q ss_pred -CCCceEEeeCCCee
Q 037288 473 -TQRSMGPQIEGKIH 486 (513)
Q Consensus 473 -p~~~~~~t~~~~~~ 486 (513)
+++.++++++.|-.
T Consensus 246 ~~~~~~l~sg~~dg~ 260 (312)
T 4ery_A 246 VTGGKWIVSGSEDNL 260 (312)
T ss_dssp CSSSCEEEECCTTSC
T ss_pred eCCCcEEEEECCCCE
Confidence 55777777766543
No 39
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.2e-27 Score=236.83 Aligned_cols=249 Identities=12% Similarity=0.059 Sum_probs=198.9
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCC----CcEEEEee-
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMET----GMASWVCR- 294 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~----~~~~~~~~- 294 (513)
..+|.+.+|++.+..... ......|...|.+++|+|++.+|++|+. +.|++||+.+ .+....+.
T Consensus 42 ~~d~~v~iw~~~~~~~~~----------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~ 111 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEK----------PIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN 111 (416)
T ss_dssp CCCCCCEEEESSSGGGCS----------CSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC
T ss_pred CCCCeEEEEEccCCCCCc----------EEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccC
Confidence 467888889887543210 1113458899999999999999998865 5699999987 33554444
Q ss_pred eCCCeEEEEEecC-CcEEEEEeCCCeEEEEECCCCc------cccccccccccCcCeEEEeeCC----eEEEeE------
Q 037288 295 SKSDILAQQVIHS-GNVVLCGFRNGAIVTVDVRKRQ------RGCSSRAGRRHRIPYSRLQRND----RVTNEQ------ 357 (513)
Q Consensus 295 ~~~~V~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~------~~~~~~~~~~h~~~v~~v~~~~----~~~s~~------ 357 (513)
|...|.+++|+|+ +++|++|+.||.|++||++..+ ....+..+..|...|.+++|+| .+++++
T Consensus 112 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~ 191 (416)
T 2pm9_A 112 HSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFAS 191 (416)
T ss_dssp SSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEE
T ss_pred CccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEE
Confidence 8888999999998 8999999999999999999876 3222345678999999999998 466655
Q ss_pred -eecccCcccceeEeec-------CCCceEEEEEcCCC-CEEEEEecCC---eEEEEecCCCCc-cceEEec-CCCCcee
Q 037288 358 -WFELKANIWPSHTTFM-------PSSISCLQSLQLYD-QYFLASSMDG---TVKLYDHRLTTR-GAVQSYE-GHVNSHT 423 (513)
Q Consensus 358 -w~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~-~~l~s~s~dg---~i~lwd~~~~~~-~~~~~~~-~h~~~v~ 423 (513)
|+...+... ..+.. ...+.++ .|+|++ .+|++++.|+ .|++||++ .. .++..+. +|...+.
T Consensus 192 iwd~~~~~~~--~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~~~~~d~~~~~i~~~d~~--~~~~~~~~~~~~~~~~v~ 266 (416)
T 2pm9_A 192 IWDLKAKKEV--IHLSYTSPNSGIKQQLSVV-EWHPKNSTRVATATGSDNDPSILIWDLR--NANTPLQTLNQGHQKGIL 266 (416)
T ss_dssp EEETTTTEEE--EEECCCCCSSCCCCCEEEE-EECSSCTTEEEEEECCSSSCCCCEEETT--STTSCSBCCCSCCSSCEE
T ss_pred EEECCCCCcc--eEEeccccccccCCceEEE-EECCCCCCEEEEEECCCCCceEEEEeCC--CCCCCcEEeecCccCcee
Confidence 888776643 23332 4556665 777876 6999999998 99999998 43 4677787 8999887
Q ss_pred EEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCC-ceEEeeCCCee
Q 037288 424 RIQLGVDQ-SERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQR-SMGPQIEGKIH 486 (513)
Q Consensus 424 ~~~~~~s~-~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~~t~~~~~~ 486 (513)
. ++|+| ++++|++++.||.|++||+.+++++..+..|...|++++|+|++ .++++++.|-.
T Consensus 267 ~--~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 267 S--LDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp E--EEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSE
T ss_pred E--EEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCc
Confidence 7 89999 89999999999999999999999999999999999999999997 78888776644
No 40
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.3e-26 Score=224.73 Aligned_cols=231 Identities=12% Similarity=0.107 Sum_probs=174.1
Q ss_pred eeEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCC--cEEEEe--e-eCCCeEEEEEecCCcEEEEEeCCCeEE
Q 037288 248 TMHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETG--MASWVC--R-SKSDILAQQVIHSGNVVLCGFRNGAIV 321 (513)
Q Consensus 248 ~~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~--~~~~~~--~-~~~~V~~l~~~~~~~~l~sg~~dg~i~ 321 (513)
.+..+.+|...|++++|+++ +|++|+ |+.|++||+.++ .....+ . |...|.+++|+|++++|++|+.|++|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 35678999999999999988 888775 556999999875 344444 2 778899999999999999999999999
Q ss_pred EEECCCCcc----ccccccccccCcCeEEEeeCC---eEEEeE-------eecccCc--ccceeEee-cCCCceEEEEEc
Q 037288 322 TVDVRKRQR----GCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKAN--IWPSHTTF-MPSSISCLQSLQ 384 (513)
Q Consensus 322 iwd~~~~~~----~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~--~~~~~~~~-~~~~v~~~~~~~ 384 (513)
+||+..... ...+..+.+|...|.+++|+| .+++++ |+..... ......+. |...+.++ .|+
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v-~~~ 162 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV-IWH 162 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE-EEC
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE-EEC
Confidence 999964321 111456889999999999999 677777 8884332 12223333 45566665 788
Q ss_pred CCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCC--CCEEEEEeCCCcEEEEeCCCC--------e
Q 037288 385 LYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQS--ERFVMSGGEDCKLRIWSIRSG--------E 454 (513)
Q Consensus 385 ~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~--g~~l~sg~~Dg~v~vwd~~~~--------~ 454 (513)
|++.+|++|+.|+.|++||.+.....++..+.+|...|.. ++|+|+ +.+|++|+.|++|++||+.++ .
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~--~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWS--SDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE--EEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEE--EEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 9999999999999999999862222478899999999877 889998 778999999999999999765 4
Q ss_pred EEEEecC-CCCCeEEEEEcCCCceEEeeCCC
Q 037288 455 LVFEDKF-SNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 455 ~~~~~~~-~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+...+.. |...|.+++|++++. +++++.|
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~~-l~s~~~d 270 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNGL-IASVGAD 270 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTSC-EEEEETT
T ss_pred EeeecccccccceEEEEEcCCCE-EEEEeCC
Confidence 4555554 888999999998774 4444433
No 41
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=7.9e-28 Score=233.70 Aligned_cols=232 Identities=12% Similarity=0.073 Sum_probs=173.5
Q ss_pred EeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcE--EEEe-eeCCCeEEEEEec--CCcEEEEEeCCCeEEEEE
Q 037288 251 LVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMA--SWVC-RSKSDILAQQVIH--SGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 251 ~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~--~~~~-~~~~~V~~l~~~~--~~~~l~sg~~dg~i~iwd 324 (513)
.+.+|.+.|++++|+|+|++|++|+. ++|+|||+.++.. +..+ .|...|.+++|++ ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 36799999999999999999999874 5699999988753 3333 4888999999985 489999999999999999
Q ss_pred CCCCccccccccccccCcCeEEEeeCC-----eEEEeE-------eecccCccc-ceeE-eecCCCceEEEEEcCC----
Q 037288 325 VRKRQRGCSSRAGRRHRIPYSRLQRND-----RVTNEQ-------WFELKANIW-PSHT-TFMPSSISCLQSLQLY---- 386 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h~~~v~~v~~~~-----~~~s~~-------w~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~---- 386 (513)
++++.... ...+.+|...|.+++|+| .+++++ |+...+... .... ..|...+.++ .|+|+
T Consensus 88 ~~~~~~~~-~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~ 165 (316)
T 3bg1_A 88 EENGTWEK-SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAV-SWAPAVVPG 165 (316)
T ss_dssp CSSSCCCE-EEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCC-EECCCCCC-
T ss_pred CCCCcceE-EEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceE-EEccccCCc
Confidence 98765333 457889999999999988 466665 777654211 0111 1233445554 55555
Q ss_pred -------------CCEEEEEecCCeEEEEecCCCCc-cceEEecCCCCceeEEEEEEcCCC----CEEEEEeCCCcEEEE
Q 037288 387 -------------DQYFLASSMDGTVKLYDHRLTTR-GAVQSYEGHVNSHTRIQLGVDQSE----RFVMSGGEDCKLRIW 448 (513)
Q Consensus 387 -------------~~~l~s~s~dg~i~lwd~~~~~~-~~~~~~~~h~~~v~~~~~~~s~~g----~~l~sg~~Dg~v~vw 448 (513)
+++|++|+.|+.|++||++.... .++.++.+|...|.. ++|+|++ .+|++|+.|++|++|
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~--v~~sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD--VAWAPSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEE--EECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEE--EEecCCCCCCCceEEEEcCCCeEEEE
Confidence 47899999999999999962111 266788999999877 8999986 899999999999999
Q ss_pred eCCCC---e-EEEEecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 449 SIRSG---E-LVFEDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 449 d~~~~---~-~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
++.+. + ....+..|...|.+++|+|++.++|+++.|-.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 244 TCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp ECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred EccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 99762 1 12234557789999999999888887776643
No 42
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=9.8e-26 Score=238.57 Aligned_cols=246 Identities=12% Similarity=0.053 Sum_probs=184.0
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccC---cEEEEEEcCC-CCEEEEEe-CCeEEEEECCCCcEEEEe--
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKC---TVWTADFCTN-PSQAVIGT-NLGAAMVDMETGMASWVC-- 293 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~s~~-g~~l~s~s-~~~i~vwd~~~~~~~~~~-- 293 (513)
..+|.+.+|++.+. ..+..+.+|.. .|.+++|+|+ ++++++++ ++.|++||+.+++.+..+
T Consensus 180 ~~d~~v~vwd~~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 247 (615)
T 1pgu_A 180 GDDGSVVFYQGPPF------------KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED 247 (615)
T ss_dssp ETTTEEEEEETTTB------------EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB
T ss_pred eCCCcEEEEeCCCc------------ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecc
Confidence 35678888875422 23566888999 9999999999 99999886 556999999999988888
Q ss_pred ---eeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccc-------------------------------------
Q 037288 294 ---RSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCS------------------------------------- 333 (513)
Q Consensus 294 ---~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~------------------------------------- 333 (513)
.|...|.+++|+ ++.+|++++.|+.|++||+++++....
T Consensus 248 ~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~ 326 (615)
T 1pgu_A 248 DQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 326 (615)
T ss_dssp TTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred cccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEEC
Confidence 788889999999 999999999999999999986643210
Q ss_pred -----cccccccCcC---------------------------------eEEEeeCC--eEEEeE-------eecccCcc-
Q 037288 334 -----SRAGRRHRIP---------------------------------YSRLQRND--RVTNEQ-------WFELKANI- 365 (513)
Q Consensus 334 -----~~~~~~h~~~---------------------------------v~~v~~~~--~~~s~~-------w~~~~~~~- 365 (513)
+..+.+|..+ |.+++|.+ .+++++ |+...+..
T Consensus 327 ~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~ 406 (615)
T 1pgu_A 327 GHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFG 406 (615)
T ss_dssp TEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECS
T ss_pred CCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCccc
Confidence 1122333333 44444432 444443 44432211
Q ss_pred -------------------------------cceeEeecCCCceEEEEEcCCCCEEEEEec-CCeEEEEecCCCCccce-
Q 037288 366 -------------------------------WPSHTTFMPSSISCLQSLQLYDQYFLASSM-DGTVKLYDHRLTTRGAV- 412 (513)
Q Consensus 366 -------------------------------~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~-dg~i~lwd~~~~~~~~~- 412 (513)
.....+.+...+.++ .++ +++|++++. |+.|++||+. .....
T Consensus 407 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~l~~~~~~d~~i~~~~~~--~~~~~~ 481 (615)
T 1pgu_A 407 SQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAV-SLS--QNYVAVGLEEGNTIQVFKLS--DLEVSF 481 (615)
T ss_dssp SCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEE-EEC--SSEEEEEETTTSCEEEEETT--EEEEEE
T ss_pred CCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEE-EEc--CCEEEEeecCCCeEEEEECC--Cccccc
Confidence 111222334455554 444 889999999 9999999996 32222
Q ss_pred EEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC-CCCCeEEEEEcC----------CCceEEee
Q 037288 413 QSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF-SNSVPSAVCWRT----------QRSMGPQI 481 (513)
Q Consensus 413 ~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~-~~~~v~~v~~~p----------~~~~~~t~ 481 (513)
..+.+|...+.. ++|+|++++|++|+.||.|++||+.+++++..+.. |...|++++|+| ++.+++++
T Consensus 482 ~~~~~~~~~v~~--~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~ 559 (615)
T 1pgu_A 482 DLKTPLRAKPSY--ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 559 (615)
T ss_dssp ECSSCCSSCEEE--EEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEE
T ss_pred cccCCccCceEE--EEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEE
Confidence 667889998877 89999999999999999999999999999999887 899999999999 88888887
Q ss_pred CCCee
Q 037288 482 EGKIH 486 (513)
Q Consensus 482 ~~~~~ 486 (513)
+.|-.
T Consensus 560 ~~dg~ 564 (615)
T 1pgu_A 560 SLDTN 564 (615)
T ss_dssp ETTSC
T ss_pred cCCCc
Confidence 76633
No 43
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=4.1e-26 Score=225.09 Aligned_cols=248 Identities=9% Similarity=0.046 Sum_probs=190.7
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEeeeCCCeE
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCRSKSDIL 300 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~~~~~V~ 300 (513)
.+|.+.+|++.+.... ....+.+|...|.+++|+|++++|++++. +.|++||+.+++......|...|.
T Consensus 62 ~dg~i~iw~~~~~~~~----------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~ 131 (368)
T 3mmy_A 62 WANDVRCWEVQDSGQT----------IPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK 131 (368)
T ss_dssp TTSEEEEEEECTTSCE----------EEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred CCCcEEEEEcCCCCce----------eEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE
Confidence 5788888988742211 22568889999999999999999998865 559999999999888888999999
Q ss_pred EEEE--ecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC-eEEEeE-------eecccCcccceeE
Q 037288 301 AQQV--IHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPSHT 370 (513)
Q Consensus 301 ~l~~--~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~~~ 370 (513)
+++| ++++++|++|+.||.|++||+++++... .+..|. .+.++.+.+ .++.+. |+...........
T Consensus 132 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 207 (368)
T 3mmy_A 132 TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM---VLQLPE-RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRI 207 (368)
T ss_dssp EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSE---EEECSS-CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEEC
T ss_pred EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEE---EEecCC-CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhc
Confidence 9999 8899999999999999999999887533 555554 566666666 444444 7766543221111
Q ss_pred e-ecCCCceEEEEEcCCCCE----EEEEecCCeEEEEecCCCCc-cceEEecCCCC------------ceeEEEEEEcCC
Q 037288 371 T-FMPSSISCLQSLQLYDQY----FLASSMDGTVKLYDHRLTTR-GAVQSYEGHVN------------SHTRIQLGVDQS 432 (513)
Q Consensus 371 ~-~~~~~v~~~~~~~~~~~~----l~s~s~dg~i~lwd~~~~~~-~~~~~~~~h~~------------~v~~~~~~~s~~ 432 (513)
. .......++ .+.++... +++++.||.|++||++.... ..+..+.+|.. .+.. ++|+|+
T Consensus 208 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~sp~ 284 (368)
T 3mmy_A 208 ESPLKHQHRCV-AIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNG--IAFHPV 284 (368)
T ss_dssp CCSCSSCEEEE-EEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEE--EEECTT
T ss_pred cccccCCCceE-EEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEE--EEEecC
Confidence 1 112233333 33333333 99999999999999984322 36778888876 5655 899999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 433 ERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 433 g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
+++|++|+.||.|++||+.+++++..+..|..+|++++|+|++.++++++.+-.
T Consensus 285 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 285 HGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp TCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCS
T ss_pred CCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccc
Confidence 999999999999999999999999999999999999999999887777766533
No 44
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=8e-27 Score=233.41 Aligned_cols=214 Identities=12% Similarity=0.122 Sum_probs=170.0
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccc-----cCcEEEEEEc----CCCCE-EEEEeC-CeEEEEECCC----
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASF-----KCTVWTADFC----TNPSQ-AVIGTN-LGAAMVDMET---- 286 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~V~~~~~s----~~g~~-l~s~s~-~~i~vwd~~~---- 286 (513)
.+|.+.+|++.+.... ....+..+..| ...|.+++|+ |++.+ |++++. +.|++||+.+
T Consensus 89 ~dg~i~iw~~~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 89 FSGDLLFYRITREDET-------KKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp TTSCEEEEEEEECTTT-------CCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred CCCCEEEEEccCCccc-------ccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 4678888887654321 00114557778 5999999999 99999 888865 5599999988
Q ss_pred --CcEEE-----Ee--------eeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccc---c---CcCeE
Q 037288 287 --GMASW-----VC--------RSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRR---H---RIPYS 345 (513)
Q Consensus 287 --~~~~~-----~~--------~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~---h---~~~v~ 345 (513)
++.+. .+ .|...|.+++|+|++ +|++|+.||.|++||+++.+.. ..+.. | ..+|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL---YNFESQHSMINNSNSIR 237 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE---EEEECCC---CCCCCEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCcee---EEEeccccccccCCccc
Confidence 54332 33 267789999999999 9999999999999999987653 35555 6 66666
Q ss_pred EEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC---CeEEEEecCCCCccceEEecC-----
Q 037288 346 RLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD---GTVKLYDHRLTTRGAVQSYEG----- 417 (513)
Q Consensus 346 ~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d---g~i~lwd~~~~~~~~~~~~~~----- 417 (513)
++ .|+|++++|++++.| |.|++||++ ....+..+.+
T Consensus 238 ~i----------------------------------~~~~~~~~l~~~~~d~~~g~i~i~d~~--~~~~~~~~~~~~~~~ 281 (397)
T 1sq9_A 238 SV----------------------------------KFSPQGSLLAIAHDSNSFGCITLYETE--FGERIGSLSVPTHSS 281 (397)
T ss_dssp EE----------------------------------EECSSTTEEEEEEEETTEEEEEEEETT--TCCEEEEECBC----
T ss_pred eE----------------------------------EECCCCCEEEEEecCCCCceEEEEECC--CCcccceeccCcccc
Confidence 64 556789999999999 999999997 5568888888
Q ss_pred --------CCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec------CC---------------CCCeEE
Q 037288 418 --------HVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDK------FS---------------NSVPSA 468 (513)
Q Consensus 418 --------h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~------~~---------------~~~v~~ 468 (513)
|...+.. ++|+|++++|++|+.||.|++||+.+++++..+. .| ...|++
T Consensus 282 ~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~ 359 (397)
T 1sq9_A 282 QASLGEFAHSSWVMS--LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 359 (397)
T ss_dssp ----CCBSBSSCEEE--EEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEE
T ss_pred cccccccccCCcEEE--EEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeE
Confidence 9988877 8999999999999999999999999999999998 77 899999
Q ss_pred EEEcCCC----------ceEEeeCCC
Q 037288 469 VCWRTQR----------SMGPQIEGK 484 (513)
Q Consensus 469 v~~~p~~----------~~~~t~~~~ 484 (513)
++|+|++ .++++++.|
T Consensus 360 ~~~~~~g~~~~~~~~~~~~l~s~~~d 385 (397)
T 1sq9_A 360 VKFLKKGWRSGMGADLNESLCCVCLD 385 (397)
T ss_dssp EEEECTTTSBSTTCTTSCEEEEEETT
T ss_pred EEeccccccccccccccceEEEecCC
Confidence 9999997 566666555
No 45
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=2.1e-26 Score=234.12 Aligned_cols=208 Identities=15% Similarity=0.158 Sum_probs=153.2
Q ss_pred eccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCC-CcEEEEe--------eeCCCeEEEEEecCC-cEEEEEeCCCeEE
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMET-GMASWVC--------RSKSDILAQQVIHSG-NVVLCGFRNGAIV 321 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~-~~~~~~~--------~~~~~V~~l~~~~~~-~~l~sg~~dg~i~ 321 (513)
..+|...|.+++|+|++++|++|.|+.|++||+.+ ++....+ .|...|.+++|+|++ ++|++|+.||.|+
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred ccCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 46899999999999999999999777799999994 4444433 477889999999998 9999999999999
Q ss_pred EEECCCCcccc-ccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEE
Q 037288 322 TVDVRKRQRGC-SSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVK 400 (513)
Q Consensus 322 iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~ 400 (513)
+||+++++... .+..+.+|..+... .....+...+.+ +.|+|++++|++++. +.|+
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~v~~-~~~s~~g~~l~~~~~-~~v~ 309 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNR---------------------SFFSEIISSISD-VKFSHSGRYMMTRDY-LSVK 309 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----C---------------------CHHHHHTTCEEE-EEECTTSSEEEEEES-SEEE
T ss_pred EEECcCCccccceeeEeccCCCcccc---------------------ccccccCceEEE-EEECCCCCEEEEeeC-CeEE
Confidence 99999876411 02345555431000 000001112333 366779999999998 9999
Q ss_pred EEecCCCC-ccceEEecCCCCcee-------------EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec------
Q 037288 401 LYDHRLTT-RGAVQSYEGHVNSHT-------------RIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDK------ 460 (513)
Q Consensus 401 lwd~~~~~-~~~~~~~~~h~~~v~-------------~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~------ 460 (513)
+||++ . ..++..+.+|...+. ...++|+|++++|++|+.||.|++||+.+++.+....
T Consensus 310 iwd~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~ 387 (447)
T 3dw8_B 310 VWDLN--MENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNK 387 (447)
T ss_dssp EEETT--CCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCC
T ss_pred EEeCC--CCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccc
Confidence 99997 4 447888888864322 1237899999999999999999999999998764221
Q ss_pred --------------------------CCCCCeEEEEEcCCCceEEeeCCC
Q 037288 461 --------------------------FSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 461 --------------------------~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
.....|..++|+|++.++|++..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~ 437 (447)
T 3dw8_B 388 PRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTN 437 (447)
T ss_dssp TTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSS
T ss_pred cccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecc
Confidence 123468899999998877776655
No 46
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.5e-26 Score=226.69 Aligned_cols=232 Identities=10% Similarity=0.054 Sum_probs=186.1
Q ss_pred eEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECC--CCcEEEEee-eCCCeEEEEEecC--CcEEEEEeCCCeEEE
Q 037288 249 MHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDME--TGMASWVCR-SKSDILAQQVIHS--GNVVLCGFRNGAIVT 322 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~--~~~~~~~~~-~~~~V~~l~~~~~--~~~l~sg~~dg~i~i 322 (513)
+..+.+|...|.+++|+|++++|++|+ |+.|++||+. +++....+. |...|.+++|+++ +++|++|+.||.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 345889999999999999999999986 5569999998 444554444 8888999999977 899999999999999
Q ss_pred EECCCCccccccccccccCcCeEEEeeCC-----eEEEeE-------eecccCcccceeEe-ecCCCceEEEEEcC----
Q 037288 323 VDVRKRQRGCSSRAGRRHRIPYSRLQRND-----RVTNEQ-------WFELKANIWPSHTT-FMPSSISCLQSLQL---- 385 (513)
Q Consensus 323 wd~~~~~~~~~~~~~~~h~~~v~~v~~~~-----~~~s~~-------w~~~~~~~~~~~~~-~~~~~v~~~~~~~~---- 385 (513)
||+++++... +..+..|...|.+++|+| .+++++ |+...........+ .+...+.++ .++|
T Consensus 84 wd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~ 161 (379)
T 3jrp_A 84 WKEENGRWSQ-IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSA-SWAPATIE 161 (379)
T ss_dssp EEEETTEEEE-EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEE-EECCCC--
T ss_pred EEcCCCceeE-eeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEE-EEcCcccc
Confidence 9999886433 567888999999999997 367766 99887755444444 345566665 6777
Q ss_pred ---------CCCEEEEEecCCeEEEEecCCCCcc--ceEEecCCCCceeEEEEEEcCC---CCEEEEEeCCCcEEEEeCC
Q 037288 386 ---------YDQYFLASSMDGTVKLYDHRLTTRG--AVQSYEGHVNSHTRIQLGVDQS---ERFVMSGGEDCKLRIWSIR 451 (513)
Q Consensus 386 ---------~~~~l~s~s~dg~i~lwd~~~~~~~--~~~~~~~h~~~v~~~~~~~s~~---g~~l~sg~~Dg~v~vwd~~ 451 (513)
++.+|++++.||.|++||++..... .+..+.+|...+.. ++|+|+ +++|++++.||.|++||+.
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~--~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD--VAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE--EEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeE--EEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 6999999999999999999732222 55678899999877 899999 8999999999999999999
Q ss_pred CCe---EEEEe--cCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 452 SGE---LVFED--KFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 452 ~~~---~~~~~--~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+++ ....+ ..+...|++++|+|++.++++++.|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 240 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred CCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC
Confidence 874 22232 3377889999999998777765554
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.6e-25 Score=217.00 Aligned_cols=267 Identities=14% Similarity=0.073 Sum_probs=211.5
Q ss_pred ecccceEEEecCCCCccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEc
Q 037288 186 MPSSVSCIKLFGKHPSCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFC 265 (513)
Q Consensus 186 ~~s~i~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s 265 (513)
+...|+++.+++.. ..++. +..+|.+.+|++.+.. .+..+.+|...|.+++|+
T Consensus 31 h~~~v~~~~~s~~~----------~~l~~-----~~~dg~i~vwd~~~~~------------~~~~~~~h~~~v~~~~~~ 83 (369)
T 3zwl_B 31 HERPLTQVKYNKEG----------DLLFS-----CSKDSSASVWYSLNGE------------RLGTLDGHTGTIWSIDVD 83 (369)
T ss_dssp CSSCEEEEEECTTS----------CEEEE-----EESSSCEEEEETTTCC------------EEEEECCCSSCEEEEEEC
T ss_pred eeceEEEEEEcCCC----------CEEEE-----EeCCCEEEEEeCCCch------------hhhhhhhcCCcEEEEEEc
Confidence 44567777776543 22222 2357788888876432 356688999999999999
Q ss_pred CCCCEEEEEeC-CeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCC-----CeEEEEECCCCcccc-------
Q 037288 266 TNPSQAVIGTN-LGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRN-----GAIVTVDVRKRQRGC------- 332 (513)
Q Consensus 266 ~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~------- 332 (513)
|++++|++++. +.|++||+.+++.+..+.+...|.+++|+|++++|++++.+ |.|++||+.......
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 163 (369)
T 3zwl_B 84 CFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSE 163 (369)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccccc
Confidence 99999998865 56999999999999888899999999999999999999999 999999998765321
Q ss_pred -ccccccccCc--CeEEEeeCC---eEEEeE-------eecccCcccceeEee-cCCCceEEEEEcCCCCEEEEEecCCe
Q 037288 333 -SSRAGRRHRI--PYSRLQRND---RVTNEQ-------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLASSMDGT 398 (513)
Q Consensus 333 -~~~~~~~h~~--~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~dg~ 398 (513)
.+..+..|.. .+.+++|++ .+++++ |+...... ....+. +...+.++ .++|++++|++++.|+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~d~~ 241 (369)
T 3zwl_B 164 EPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYE-YVDSIDLHEKSISDM-QFSPDLTYFITSSRDTN 241 (369)
T ss_dssp SCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTE-EEEEEECCSSCEEEE-EECTTSSEEEEEETTSE
T ss_pred ceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcE-eEEEEecCCCceeEE-EECCCCCEEEEecCCce
Confidence 1334555665 999999998 566665 88876322 223333 45566665 78899999999999999
Q ss_pred EEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCC--------------cEEEEeCCCCeEEEEecCCCC
Q 037288 399 VKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDC--------------KLRIWSIRSGELVFEDKFSNS 464 (513)
Q Consensus 399 i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg--------------~v~vwd~~~~~~~~~~~~~~~ 464 (513)
|++||++ ....+..+. +...+.. ++|+|+++++++++.++ .+++||+.+++++..+..|..
T Consensus 242 i~v~d~~--~~~~~~~~~-~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 316 (369)
T 3zwl_B 242 SFLVDVS--TLQVLKKYE-TDCPLNT--AVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG 316 (369)
T ss_dssp EEEEETT--TCCEEEEEE-CSSCEEE--EEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS
T ss_pred EEEEECC--CCceeeeec-CCCCcee--EEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC
Confidence 9999997 555677776 6666655 89999999999999998 899999999999999999999
Q ss_pred CeEEEEEcCCCceEEeeCCCee
Q 037288 465 VPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 465 ~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
.|++++|+|++.++++++.|-.
T Consensus 317 ~v~~~~~s~~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 317 PLNTVAISPQGTSYASGGEDGF 338 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTSE
T ss_pred cEEEEEECCCCCEEEEEcCCCe
Confidence 9999999999888888876643
No 48
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.2e-25 Score=217.26 Aligned_cols=227 Identities=11% Similarity=0.067 Sum_probs=186.7
Q ss_pred eeEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEEC
Q 037288 248 TMHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 248 ~~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~ 325 (513)
....+.+|...|.+++|+|++++|++|+ |+.|++||+.+++.+..+. |...|.+++|+|++++|++++.||.|++||+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 3466899999999999999999999886 5569999999999887776 7888999999999999999999999999999
Q ss_pred CCCccccccccccccCcCeEEEeeCC---eEEEeE------------eecccCcccc---------eeEeec-CC--Cce
Q 037288 326 RKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ------------WFELKANIWP---------SHTTFM-PS--SIS 378 (513)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~------------w~~~~~~~~~---------~~~~~~-~~--~v~ 378 (513)
.+++... .+. |..+|.+++|+| .++++. |+........ ...+.. .. .+.
T Consensus 104 ~~~~~~~---~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 104 SNGQCVA---TWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp TTCCEEE---EEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred CCCcEEE---Eee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9887543 444 889999999999 444432 6666554321 111211 11 445
Q ss_pred EEEEEcCCCCEEEEEecCCeEEEEecCCCC-ccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 037288 379 CLQSLQLYDQYFLASSMDGTVKLYDHRLTT-RGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVF 457 (513)
Q Consensus 379 ~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~-~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~ 457 (513)
+ ..+++++++|++++.||.|++||++ . ...+..+..|...+.. ++|+|++++|++++.||.|++||+.+++.+.
T Consensus 180 ~-~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 180 V-AGWSTKGKYIIAGHKDGKISKYDVS--NNYEYVDSIDLHEKSISD--MQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp E-EEECGGGCEEEEEETTSEEEEEETT--TTTEEEEEEECCSSCEEE--EEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred E-EEEcCCCCEEEEEcCCCEEEEEECC--CCcEeEEEEecCCCceeE--EEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 5 4788999999999999999999997 4 3478889999998877 8999999999999999999999999999999
Q ss_pred EecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 458 EDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 458 ~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
.+. +...+..++|+|++.++++++.+
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 255 KYE-TDCPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp EEE-CSSCEEEEEECSSSSEEEEEECC
T ss_pred eec-CCCCceeEEecCCCceEEEeecC
Confidence 887 57789999999997766665544
No 49
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=4.7e-26 Score=231.40 Aligned_cols=248 Identities=13% Similarity=0.099 Sum_probs=189.3
Q ss_pred cCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcC-CCCEEEEEe-CCeEEEEECCCCcEEEEeee--
Q 037288 220 ETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT-NPSQAVIGT-NLGAAMVDMETGMASWVCRS-- 295 (513)
Q Consensus 220 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~-~g~~l~s~s-~~~i~vwd~~~~~~~~~~~~-- 295 (513)
+..+|.+.+|++...... ....+.+|.+.|++++|+| ++.+|++|+ |++|++||++++.......+
T Consensus 138 Gs~dg~i~lWd~~~~~~~----------~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 207 (435)
T 4e54_B 138 GSKGGDIMLWNFGIKDKP----------TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDT 207 (435)
T ss_dssp EETTSCEEEECSSCCSCC----------EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSS
T ss_pred EeCCCEEEEEECCCCCce----------eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCC
Confidence 346889999988754332 3445779999999999998 788999886 55699999987765544442
Q ss_pred -CCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC----eEEEeE-------eecccC
Q 037288 296 -KSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKA 363 (513)
Q Consensus 296 -~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~ 363 (513)
...+.+++|+|++++|++|+.||.|++||++... +..+.+|...|.+++|+| .+++++ |+++..
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~----~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE----LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQV 283 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB----CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTC
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce----eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccc
Confidence 3347899999999999999999999999997543 558899999999999998 455665 988776
Q ss_pred ccccee--EeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCc----eeEEEEEEcCCCCEEE
Q 037288 364 NIWPSH--TTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNS----HTRIQLGVDQSERFVM 437 (513)
Q Consensus 364 ~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~----v~~~~~~~s~~g~~l~ 437 (513)
...... ...|...|.++ .|+|++++|++++.||.|++||++ .......+..|... +..+...|+|++..++
T Consensus 284 ~~~~~~~~~~~h~~~v~~~-~~spdg~~l~s~~~D~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (435)
T 4e54_B 284 RGKASFLYSLPHRHPVNAA-CFSPDGARLLTTDQKSEIRVYSAS--QWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIV 360 (435)
T ss_dssp CSSSCCSBCCBCSSCEEEC-CBCTTSSEEEEEESSSCEEEEESS--SSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEE
T ss_pred cccceEEEeeeccccccce-eECCCCCeeEEEcCCCEEEEEECC--CCccceEEecccccccccceeEEEEEcCCCCEEE
Confidence 543222 23456677775 789999999999999999999997 44566666655432 2233456777777777
Q ss_pred EEeC------------CCcEEEEeCCCCeEEEEec-CCCCCeEEE-EEcCCCceEEeeCCC
Q 037288 438 SGGE------------DCKLRIWSIRSGELVFEDK-FSNSVPSAV-CWRTQRSMGPQIEGK 484 (513)
Q Consensus 438 sg~~------------Dg~v~vwd~~~~~~~~~~~-~~~~~v~~v-~~~p~~~~~~t~~~~ 484 (513)
+++. ++.|++||..+++++..+. .|...|.++ +|+|++.++++++.+
T Consensus 361 ~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~ 421 (435)
T 4e54_B 361 VGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGY 421 (435)
T ss_dssp EECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSS
T ss_pred EEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCC
Confidence 6643 4579999999999998864 567778776 699999888887644
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=4.2e-26 Score=225.83 Aligned_cols=228 Identities=9% Similarity=-0.016 Sum_probs=189.3
Q ss_pred eccccCcEEEEEEcCCCCEEEEE-eCCeEEEEECCCCc--EEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCC
Q 037288 252 VASFKCTVWTADFCTNPSQAVIG-TNLGAAMVDMETGM--ASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRK 327 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~-s~~~i~vwd~~~~~--~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 327 (513)
+..|..+|.+++|+|++++|++| .++.|++||+.+++ ....+. |...|.+++|+|++++|++|+.||.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45588999999999999999988 56669999999886 555554 888899999999999999999999999999988
Q ss_pred CccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccc-eeEe--ecCCCceEEEEEcCCCCEEEEEe
Q 037288 328 RQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWP-SHTT--FMPSSISCLQSLQLYDQYFLASS 394 (513)
Q Consensus 328 ~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~-~~~~--~~~~~v~~~~~~~~~~~~l~s~s 394 (513)
.+... ...+..|...|.+++|+| .+++++ |+...+.... ...+ .+...+.++ .++|++++|++++
T Consensus 84 ~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 84 RTWKP-TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSL-DWHPNSVLLAAGS 161 (372)
T ss_dssp TEEEE-EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEE-EECTTSSEEEEEE
T ss_pred Ceeee-eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEE-EEcCCCCEEEEEc
Confidence 76443 345678999999999998 666666 8877665321 1122 235566665 7888999999999
Q ss_pred cCCeEEEEecCC----------------CCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE
Q 037288 395 MDGTVKLYDHRL----------------TTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFE 458 (513)
Q Consensus 395 ~dg~i~lwd~~~----------------~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~ 458 (513)
.||.|++||++. .....+..+.+|...+.. ++|+|++++|++++.||.|++||+.+++++..
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHG--VCFSANGSRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEE--EEECSSSSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEE--EEECCCCCEEEEEeCCCEEEEEECCCCceeEE
Confidence 999999999641 123477888899998877 89999999999999999999999999999999
Q ss_pred ecCCCCCeEEEEEcCCCceEEeeCC
Q 037288 459 DKFSNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 459 ~~~~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
+..|..+|.+++|+|++.+++++..
T Consensus 240 ~~~~~~~v~~~~~~~~~~~l~~~~d 264 (372)
T 1k8k_C 240 LASETLPLLAVTFITESSLVAAGHD 264 (372)
T ss_dssp EECSSCCEEEEEEEETTEEEEEETT
T ss_pred EccCCCCeEEEEEecCCCEEEEEeC
Confidence 9999999999999999887777744
No 51
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=5.6e-26 Score=222.32 Aligned_cols=246 Identities=13% Similarity=0.110 Sum_probs=196.4
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCC-EEEEEe-CCeEEEEEC-CCCcEEEEee--eC
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPS-QAVIGT-NLGAAMVDM-ETGMASWVCR--SK 296 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~-~l~s~s-~~~i~vwd~-~~~~~~~~~~--~~ 296 (513)
.+|.+.+|++...... .....+.+|...|.+++|+|++. +|++|+ ++.|++||+ .+++...... |.
T Consensus 31 ~d~~v~iw~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 101 (342)
T 1yfq_A 31 WDGSLTVYKFDIQAKN---------VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEAN 101 (342)
T ss_dssp TTSEEEEEEEETTTTE---------EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCC
T ss_pred CCCeEEEEEeCCCCcc---------ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCC
Confidence 4688888887643211 11344668999999999999999 888886 556999999 9888876667 88
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEECCC---------CccccccccccccCcCeEEEeeCC-eEEEeE-------ee
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVDVRK---------RQRGCSSRAGRRHRIPYSRLQRND-RVTNEQ-------WF 359 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~---------~~~~~~~~~~~~h~~~v~~v~~~~-~~~s~~-------w~ 359 (513)
..|.+++|+| +++|++++.|+.|++||++. .+. +..+. |...|.+++|++ .+++++ |+
T Consensus 102 ~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d 176 (342)
T 1yfq_A 102 LGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN---SNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFR 176 (342)
T ss_dssp SCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC---SSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEE
T ss_pred CceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe---eeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEE
Confidence 8999999999 99999999999999999986 543 33444 899999999999 666665 88
Q ss_pred ccc-Ccccce-eEeecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCC--C--ccceEEecCCCC---------cee
Q 037288 360 ELK-ANIWPS-HTTFMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLT--T--RGAVQSYEGHVN---------SHT 423 (513)
Q Consensus 360 ~~~-~~~~~~-~~~~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~--~--~~~~~~~~~h~~---------~v~ 423 (513)
... +..... ....+...+.++ .++| ++++|++++.||.|++||++.. . ......+.+|.. .+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~i~~i-~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (342)
T 1yfq_A 177 LPLCEDDNGTIEESGLKYQIRDV-ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN 255 (342)
T ss_dssp SSCCTTCCCEEEECSCSSCEEEE-EECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEE
T ss_pred CCccccccceeeecCCCCceeEE-EECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEE
Confidence 877 443222 223345566665 7888 9999999999999999999832 0 157778888865 666
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCC-CCCeEEEEEcCCCceEEeeCCCee
Q 037288 424 RIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFS-NSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 424 ~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~-~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
. ++|+|++++|++|+.||.|++||+.+++++..+..| ..+|++++ |++.++++++.|-.
T Consensus 256 ~--~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 256 S--IEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp E--EEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred E--EEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 5 899999999999999999999999999999999988 99999999 88777766665543
No 52
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6e-25 Score=211.90 Aligned_cols=224 Identities=13% Similarity=0.093 Sum_probs=184.5
Q ss_pred eeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEEC
Q 037288 248 TMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 248 ~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~ 325 (513)
....+.+|...|.+++| +++.+|++|+. +.|++||+.++.....+. |...|.+++|+|++++|++|+.||.|++||+
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPL 88 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEe
Confidence 46778999999999999 99999998865 559999999888666555 7788999999999999999999999999999
Q ss_pred CCCccccccccccccCcCeEEEeeCC-eEEEeE-------eecccCcccceeEe-ecCCCceEEEEEcCCCCEEEEEecC
Q 037288 326 RKRQRGCSSRAGRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPSHTT-FMPSSISCLQSLQLYDQYFLASSMD 396 (513)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~s~d 396 (513)
........+..+.+|...|.++.|+. .+++++ |+ .+. ....+ .+...+.++.+.++++++|++++.|
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 164 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGS--LVYNLQAHNASVWDAKVVSFSENKFLTASAD 164 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTE--EEEEEECCSSCEEEEEEEETTTTEEEEEETT
T ss_pred eecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCc--EEEecccCCCceeEEEEccCCCCEEEEEECC
Confidence 87654333567889999999999977 677766 77 221 22222 3567788887777799999999999
Q ss_pred CeEEEEecCCCCccceEEecC-CCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCC
Q 037288 397 GTVKLYDHRLTTRGAVQSYEG-HVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQR 475 (513)
Q Consensus 397 g~i~lwd~~~~~~~~~~~~~~-h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~ 475 (513)
|.|++||.. ..+..+.. |...+.. ++|+|++. +++++.||.|++||+++++++..+..|...|++++|+|++
T Consensus 165 ~~i~i~d~~----~~~~~~~~~~~~~i~~--~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 165 KTIKLWQND----KVIKTFSGIHNDVVRH--LAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG 237 (313)
T ss_dssp SCEEEEETT----EEEEEECSSCSSCEEE--EEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred CCEEEEecC----ceEEEEeccCcccEEE--EEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC
Confidence 999999953 36667776 8888777 88899998 9999999999999999999999999999999999999998
Q ss_pred ceEEeeCC
Q 037288 476 SMGPQIEG 483 (513)
Q Consensus 476 ~~~~t~~~ 483 (513)
.+++++..
T Consensus 238 ~l~~~~~d 245 (313)
T 3odt_A 238 DIVSCGED 245 (313)
T ss_dssp CEEEEETT
T ss_pred CEEEEecC
Confidence 54444433
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=1.5e-25 Score=241.30 Aligned_cols=226 Identities=15% Similarity=0.182 Sum_probs=183.7
Q ss_pred EEeccccCcEEEEEEcCCC-CEEEEEeC-CeEEEEECCCCc-----EE-EEeeeCCCeEEEEEecCCcEEEEEeCCCeEE
Q 037288 250 HLVASFKCTVWTADFCTNP-SQAVIGTN-LGAAMVDMETGM-----AS-WVCRSKSDILAQQVIHSGNVVLCGFRNGAIV 321 (513)
Q Consensus 250 ~~~~~h~~~V~~~~~s~~g-~~l~s~s~-~~i~vwd~~~~~-----~~-~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~ 321 (513)
..+.+|.+.|++++|++++ .+|++|+. ++|++||+.+.. .. .+..|...|.+++|+|++++|++|+.||+|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4588999999999999864 68888865 569999997642 23 3345888899999999999999999999999
Q ss_pred EEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeE--eecCCCceEEEEEcCCC--
Q 037288 322 TVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHT--TFMPSSISCLQSLQLYD-- 387 (513)
Q Consensus 322 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~-- 387 (513)
+||+.++.. ...+.+|...|.+++|+| .+++++ |+........... ..|...+.++ .++|++
T Consensus 456 vwd~~~~~~---~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~ 531 (694)
T 3dm0_A 456 LWDLAAGVS---TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV-RFSPNTLQ 531 (694)
T ss_dssp EEETTTTEE---EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEE-EECSCSSS
T ss_pred EEECCCCcc---eeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEE-EEeCCCCc
Confidence 999998875 458899999999999998 788887 8764332110000 1234456665 777776
Q ss_pred CEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeE
Q 037288 388 QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPS 467 (513)
Q Consensus 388 ~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~ 467 (513)
..|++++.|+.|++||++ .......+.+|.+.|.+ ++|+|++++|++|+.||+|++||+.+++++..+.. ...|.
T Consensus 532 ~~l~s~s~d~~v~vwd~~--~~~~~~~~~~h~~~v~~--v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~ 606 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLS--NCKLRSTLAGHTGYVST--VAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIH 606 (694)
T ss_dssp CEEEEEETTSCEEEEETT--TCCEEEEECCCSSCEEE--EEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEE
T ss_pred ceEEEEeCCCeEEEEECC--CCcEEEEEcCCCCCEEE--EEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEE
Confidence 689999999999999997 55588889999999877 89999999999999999999999999999988765 46799
Q ss_pred EEEEcCCCceEEeeCCC
Q 037288 468 AVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 468 ~v~~~p~~~~~~t~~~~ 484 (513)
+++|+|++.+++++..+
T Consensus 607 ~~~~sp~~~~l~~~~~~ 623 (694)
T 3dm0_A 607 ALCFSPNRYWLCAATEH 623 (694)
T ss_dssp EEEECSSSSEEEEEETT
T ss_pred EEEEcCCCcEEEEEcCC
Confidence 99999998777666544
No 54
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=6e-25 Score=214.64 Aligned_cols=227 Identities=13% Similarity=0.184 Sum_probs=181.2
Q ss_pred eEEeccccCcEEEEEEcCC-CCEEEEEeC-CeEEEEECCCCc-----EEEEe-eeCCCeEEEEEecCCcEEEEEeCCCeE
Q 037288 249 MHLVASFKCTVWTADFCTN-PSQAVIGTN-LGAAMVDMETGM-----ASWVC-RSKSDILAQQVIHSGNVVLCGFRNGAI 320 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~-g~~l~s~s~-~~i~vwd~~~~~-----~~~~~-~~~~~V~~l~~~~~~~~l~sg~~dg~i 320 (513)
..+|.||.+.|++++|+|+ +++|++|+. ++|+|||+.+++ +...+ .|...|.+++|+|++++|++|+.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3568999999999999997 689998875 569999987654 33333 378889999999999999999999999
Q ss_pred EEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEeecCCCceEEEEEcCC--CC
Q 037288 321 VTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQLY--DQ 388 (513)
Q Consensus 321 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ 388 (513)
++|+....... .....+...+..+.+.+ .+++++ |+.............+...+..+ .++++ ..
T Consensus 111 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~ 186 (340)
T 4aow_A 111 RLWDLTTGTTT---RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCV-RFSPNSSNP 186 (340)
T ss_dssp EEEETTTTEEE---EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEE-EECSCSSSC
T ss_pred eEEeeccccee---eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccce-EEccCCCCc
Confidence 99999887653 36677788888888887 677776 76654432222222334455554 55554 45
Q ss_pred EEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEE
Q 037288 389 YFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSA 468 (513)
Q Consensus 389 ~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~ 468 (513)
++++++.|+.|++||++ ....+..+.+|.+.|.+ ++|+|++++|++|+.||.|++||+.+++++..+..+ ..+.+
T Consensus 187 ~~~s~~~d~~i~i~d~~--~~~~~~~~~~h~~~v~~--~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~ 261 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLA--NCKLKTNHIGHTGYLNT--VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINA 261 (340)
T ss_dssp EEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEE--EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEE
T ss_pred EEEEEcCCCEEEEEECC--CCceeeEecCCCCcEEE--EEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEe
Confidence 78899999999999997 55588899999999877 889999999999999999999999999999998764 57999
Q ss_pred EEEcCCCceEEeeCCC
Q 037288 469 VCWRTQRSMGPQIEGK 484 (513)
Q Consensus 469 v~~~p~~~~~~t~~~~ 484 (513)
++|+|++.+++++..+
T Consensus 262 ~~~~~~~~~~~~~~d~ 277 (340)
T 4aow_A 262 LCFSPNRYWLCAATGP 277 (340)
T ss_dssp EEECSSSSEEEEEETT
T ss_pred eecCCCCceeeccCCC
Confidence 9999997776666543
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.5e-27 Score=237.20 Aligned_cols=230 Identities=10% Similarity=0.061 Sum_probs=179.9
Q ss_pred eccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCC--cEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCC
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETG--MASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRK 327 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~--~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 327 (513)
...|..+|++++|+|++++|++|+ |+.|++||+.++ +....+. |...|.+++|+|++++|++|+.|+.|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 445678999999999999999885 566999999988 4544444 788899999999999999999999999999998
Q ss_pred Cc-cccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcc-cceeEee--cCCCceEEEEEcCCCCEEEEE
Q 037288 328 RQ-RGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANI-WPSHTTF--MPSSISCLQSLQLYDQYFLAS 393 (513)
Q Consensus 328 ~~-~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~-~~~~~~~--~~~~v~~~~~~~~~~~~l~s~ 393 (513)
+. ... ...+.+|...|.+++|+| .+++++ |+...+.. .....+. +...+.++ .++|++++|+++
T Consensus 87 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~l~~~ 164 (377)
T 3dwl_C 87 DGTWKQ-TLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSL-DWHPNNVLLAAG 164 (377)
T ss_dssp --CCCC-EEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEE-EECTTSSEEEEE
T ss_pred CCceee-eeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEE-EEcCCCCEEEEE
Confidence 76 222 557889999999999998 677776 88776652 1223343 56677775 788999999999
Q ss_pred ecCCeEEEEecCCC----------------CccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--
Q 037288 394 SMDGTVKLYDHRLT----------------TRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGEL-- 455 (513)
Q Consensus 394 s~dg~i~lwd~~~~----------------~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~-- 455 (513)
+.|+.|++||++.. ...++..+ +|...+.. ++|+|++++|++|+.||.|++||+.+++.
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~--~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHA--VGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEE--EEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEE--EEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 99999999998521 12255566 89988877 89999999999999999999999999987
Q ss_pred --EEEecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 456 --VFEDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 456 --~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
+..+..|..+|.+++|+|++.++++++.+..
T Consensus 242 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 274 (377)
T 3dwl_C 242 RALITVKLSQLPLRSLLWANESAIVAAGYNYSP 274 (377)
T ss_dssp EECCCEECSSSCEEEEEEEETTEEEEEESSSSE
T ss_pred eeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE
Confidence 7778889999999999999888888776544
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=4e-25 Score=237.98 Aligned_cols=250 Identities=14% Similarity=0.123 Sum_probs=194.7
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSD 298 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~ 298 (513)
..+|.+.+|++....... ......+.+|...|.+++|+|++++|++|+. +.|+|||+.++.....+. |...
T Consensus 402 s~D~~i~~W~~~~~~~~~-------~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~ 474 (694)
T 3dm0_A 402 SRDKSIILWKLTKDDKAY-------GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD 474 (694)
T ss_dssp ETTSEEEEEECCCSTTCS-------CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred eCCCcEEEEEccCCCccc-------ccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC
Confidence 468899999887543221 1124568899999999999999999999874 569999999998776654 8888
Q ss_pred eEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC-----eEEEeE-------eecccCccc
Q 037288 299 ILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND-----RVTNEQ-------WFELKANIW 366 (513)
Q Consensus 299 V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~-----~~~s~~-------w~~~~~~~~ 366 (513)
|.+++|+|+++.|++|+.|++|++||+.............+|...|.+++|+| .+++++ |+.......
T Consensus 475 v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 475 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR 554 (694)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE
Confidence 99999999999999999999999999876543221234568999999999998 477776 888766532
Q ss_pred ceeEee-cCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcE
Q 037288 367 PSHTTF-MPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKL 445 (513)
Q Consensus 367 ~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v 445 (513)
..+. |...+.++ .++|++++|++|+.||.|++||++ ....+..+..+ ..+.. ++|+|++.+|++++ |+.|
T Consensus 555 --~~~~~h~~~v~~v-~~spdg~~l~sg~~Dg~i~iwd~~--~~~~~~~~~~~-~~v~~--~~~sp~~~~l~~~~-~~~i 625 (694)
T 3dm0_A 555 --STLAGHTGYVSTV-AVSPDGSLCASGGKDGVVLLWDLA--EGKKLYSLEAN-SVIHA--LCFSPNRYWLCAAT-EHGI 625 (694)
T ss_dssp --EEECCCSSCEEEE-EECTTSSEEEEEETTSBCEEEETT--TTEEEECCBCS-SCEEE--EEECSSSSEEEEEE-TTEE
T ss_pred --EEEcCCCCCEEEE-EEeCCCCEEEEEeCCCeEEEEECC--CCceEEEecCC-CcEEE--EEEcCCCcEEEEEc-CCCE
Confidence 3333 45566665 889999999999999999999997 44566666543 45555 89999998887766 5669
Q ss_pred EEEeCCCCeEEEEecCCC-------------------CCeEEEEEcCCCceEEeeCCCee
Q 037288 446 RIWSIRSGELVFEDKFSN-------------------SVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 446 ~vwd~~~~~~~~~~~~~~-------------------~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
+|||+.+++++..+..+. ..+++++|+|++.++++++.|-.
T Consensus 626 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~ 685 (694)
T 3dm0_A 626 KIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGV 685 (694)
T ss_dssp EEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCe
Confidence 999999999888765321 13788999999888888776643
No 57
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.95 E-value=8.8e-26 Score=258.73 Aligned_cols=181 Identities=13% Similarity=0.215 Sum_probs=153.7
Q ss_pred eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC--eEEEeE-------eecccCcc
Q 037288 295 SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND--RVTNEQ-------WFELKANI 365 (513)
Q Consensus 295 ~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~s~~-------w~~~~~~~ 365 (513)
|...|.+++|+|++++|++|+.||.|++||+.++.. ..+..|...|.++.|++ .+++++ |+...+..
T Consensus 1002 h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1002 HKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDY----VFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp CSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEE----ECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCC
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCce----EEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCce
Confidence 677899999999999999999999999999998764 35678999999999999 777776 88887764
Q ss_pred cceeEee-cCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCc
Q 037288 366 WPSHTTF-MPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCK 444 (513)
Q Consensus 366 ~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~ 444 (513)
. ..+. +...+.++ .++|++++|++++.||.|++||+. ...++..+.+|...|++ ++|+|+|++|++|+.||.
T Consensus 1078 ~--~~~~~~~~~v~~~-~~s~d~~~l~s~s~d~~v~iwd~~--~~~~~~~l~~h~~~v~~--~~~s~dg~~lat~~~dg~ 1150 (1249)
T 3sfz_A 1078 E--RDFTCHQGTVLSC-AISSDATKFSSTSADKTAKIWSFD--LLSPLHELKGHNGCVRC--SAFSLDGILLATGDDNGE 1150 (1249)
T ss_dssp C--EEEECCSSCCCCE-EECSSSSSCEEECCSSCCCEECSS--SSSCSBCCCCCSSCEEE--EEECSSSSEEEEEETTSC
T ss_pred e--EEEcccCCcEEEE-EECCCCCEEEEEcCCCcEEEEECC--CcceeeeeccCCCcEEE--EEECCCCCEEEEEeCCCE
Confidence 3 2333 45566665 789999999999999999999997 55588889999999877 899999999999999999
Q ss_pred EEEEeCCCCeEEEEe---------cCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 445 LRIWSIRSGELVFED---------KFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 445 v~vwd~~~~~~~~~~---------~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
|++||+.+++++..+ ..|.+.|++++|+|++.+++++++.+.
T Consensus 1151 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~ 1201 (1249)
T 3sfz_A 1151 IRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLK 1201 (1249)
T ss_dssp CCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEE
T ss_pred EEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECCCeEE
Confidence 999999999877665 567889999999999988888876555
No 58
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2.3e-25 Score=217.45 Aligned_cols=233 Identities=12% Similarity=0.074 Sum_probs=187.1
Q ss_pred EeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCc----EEEEe-eeCCCeEEEEEec--CCcEEEEEeCCCeEEE
Q 037288 251 LVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGM----ASWVC-RSKSDILAQQVIH--SGNVVLCGFRNGAIVT 322 (513)
Q Consensus 251 ~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~----~~~~~-~~~~~V~~l~~~~--~~~~l~sg~~dg~i~i 322 (513)
.+.+|.+.|.+++|+|++++|++|+. +.|++||+.++. ....+ .|...|.+++|+| ++++|++|+.||.|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 37899999999999999999998875 569999998763 33333 4888899999999 6999999999999999
Q ss_pred EECCCCccc------cccccccccCcCeEEEeeCC-----eEEEeE-------eecccCcccceeEe------------e
Q 037288 323 VDVRKRQRG------CSSRAGRRHRIPYSRLQRND-----RVTNEQ-------WFELKANIWPSHTT------------F 372 (513)
Q Consensus 323 wd~~~~~~~------~~~~~~~~h~~~v~~v~~~~-----~~~s~~-------w~~~~~~~~~~~~~------------~ 372 (513)
||++.+... ..+..+.+|...|.+++|+| .+++++ |+...+........ .
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 999876421 11457789999999999997 477766 99877664432221 2
Q ss_pred cCCCceEEEEEcCC---CCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCC----CEEEEEeCCCcE
Q 037288 373 MPSSISCLQSLQLY---DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE----RFVMSGGEDCKL 445 (513)
Q Consensus 373 ~~~~v~~~~~~~~~---~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g----~~l~sg~~Dg~v 445 (513)
+...+.++ .++|+ +.+|++++.|+.+.+|+........+..+.+|...+.. ++|+|++ ++|++|+.||.|
T Consensus 166 ~~~~~~~~-~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~--~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 166 HLQSDFCL-SWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRS--ISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSCCCEEE-EECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEE--EEECCCSSCSSEEEEEEETTSCE
T ss_pred cccceeEE-EeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeE--EEECCCCCCcceEEEEEcCCCeE
Confidence 34456665 67776 89999999999998887752222257788899999877 8999998 899999999999
Q ss_pred EEEeCCCC----------------------------------------------eEEEEecCCCCCeEEEEEcCCCceEE
Q 037288 446 RIWSIRSG----------------------------------------------ELVFEDKFSNSVPSAVCWRTQRSMGP 479 (513)
Q Consensus 446 ~vwd~~~~----------------------------------------------~~~~~~~~~~~~v~~v~~~p~~~~~~ 479 (513)
++||+.++ +++..+..|...|++++|+|++.+++
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence 99999875 67777888999999999999988888
Q ss_pred eeCCCee
Q 037288 480 QIEGKIH 486 (513)
Q Consensus 480 t~~~~~~ 486 (513)
+++.|-.
T Consensus 323 s~~~dg~ 329 (351)
T 3f3f_A 323 SAGDDGK 329 (351)
T ss_dssp EEETTSC
T ss_pred EecCCCc
Confidence 8876644
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.9e-25 Score=224.42 Aligned_cols=216 Identities=11% Similarity=0.123 Sum_probs=167.6
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCC-CcEEEEe-eeCCC
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMET-GMASWVC-RSKSD 298 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~-~~~~~~~-~~~~~ 298 (513)
.+|.+.+|++.+.. .+..+.+|...|.+++| ++.++++|+. +.|++||+.. +.....+ .|...
T Consensus 154 ~dg~i~iwd~~~~~------------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 219 (401)
T 4aez_A 154 GNGLVDIYDVESQT------------KLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSE 219 (401)
T ss_dssp TTSCEEEEETTTCC------------EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred CCCeEEEEECcCCe------------EEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCC
Confidence 46788888876432 35668899999999999 5678888765 5599999984 4444444 48888
Q ss_pred eEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC----eEEEeE---------eecccCcc
Q 037288 299 ILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ---------WFELKANI 365 (513)
Q Consensus 299 V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~---------w~~~~~~~ 365 (513)
|.+++|+|++++|++|+.|+.|++||+++... +..+..|...|.+++|+| .+++++ |+...+..
T Consensus 220 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIP---KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTCSSE---EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc---cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 99999999999999999999999999998765 447889999999999998 344431 88877653
Q ss_pred cceeEeecCCCceEEEEEcCCCCEEEEEe--cCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCC
Q 037288 366 WPSHTTFMPSSISCLQSLQLYDQYFLASS--MDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDC 443 (513)
Q Consensus 366 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~s--~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg 443 (513)
...+.+...+.++ .+++++++|++++ .||.|++||+..........+.+|...+.. ++|+|+|++|++++.||
T Consensus 297 --~~~~~~~~~v~~~-~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~--~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 297 --VNTVDAGSQVTSL-IWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLY--SALSPDGRILSTAASDE 371 (401)
T ss_dssp --EEEEECSSCEEEE-EECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCE--EEECTTSSEEEEECTTS
T ss_pred --EEEEeCCCcEEEE-EECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEE--EEECCCCCEEEEEeCCC
Confidence 3455666777775 7889999999954 899999999972212245567899999877 89999999999999999
Q ss_pred cEEEEeCCCCeEEEEe
Q 037288 444 KLRIWSIRSGELVFED 459 (513)
Q Consensus 444 ~v~vwd~~~~~~~~~~ 459 (513)
.|++|++.+++.+...
T Consensus 372 ~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 372 NLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEEEECCC-------
T ss_pred cEEEEECCCCcccccc
Confidence 9999999999887764
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=1.4e-25 Score=222.04 Aligned_cols=216 Identities=12% Similarity=0.017 Sum_probs=164.5
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcE---EEEe--ee
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMA---SWVC--RS 295 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~---~~~~--~~ 295 (513)
.+|.+.+|++.+.... ....+..|...|.+++|+|+++++++++. +.|++||+.++.. ...+ .|
T Consensus 72 ~dg~i~vwd~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~ 141 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWK----------PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI 141 (372)
T ss_dssp TTSCEEEEEEETTEEE----------EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTC
T ss_pred CCCeEEEEECCCCeee----------eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeeccc
Confidence 4678888887533211 23345789999999999999999998865 5599999988762 2222 26
Q ss_pred CCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccc---------------cccccccccCcCeEEEeeCCeEEEeEeec
Q 037288 296 KSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRG---------------CSSRAGRRHRIPYSRLQRNDRVTNEQWFE 360 (513)
Q Consensus 296 ~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~---------------~~~~~~~~h~~~v~~v~~~~~~~s~~w~~ 360 (513)
...|.+++|+|++++|++|+.||.|++||++..... ..+..+.+|...|.+
T Consensus 142 ~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------- 207 (372)
T 1k8k_C 142 RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHG-------------- 207 (372)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEE--------------
T ss_pred CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEE--------------
Confidence 788999999999999999999999999997632110 002344455555555
Q ss_pred ccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEe
Q 037288 361 LKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGG 440 (513)
Q Consensus 361 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~ 440 (513)
+.++|++++|++++.|+.|++||++ ...++..+..|...+.. ++|+|++.+|++|
T Consensus 208 --------------------~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~- 262 (372)
T 1k8k_C 208 --------------------VCFSANGSRVAWVSHDSTVCLADAD--KKMAVATLASETLPLLA--VTFITESSLVAAG- 262 (372)
T ss_dssp --------------------EEECSSSSEEEEEETTTEEEEEEGG--GTTEEEEEECSSCCEEE--EEEEETTEEEEEE-
T ss_pred --------------------EEECCCCCEEEEEeCCCEEEEEECC--CCceeEEEccCCCCeEE--EEEecCCCEEEEE-
Confidence 3566799999999999999999997 55688899999888877 8899999988877
Q ss_pred CCCcEEEEeCCC--CeEE--------------------------------------EEe-cCCCCCeEEEEEc-CCC---
Q 037288 441 EDCKLRIWSIRS--GELV--------------------------------------FED-KFSNSVPSAVCWR-TQR--- 475 (513)
Q Consensus 441 ~Dg~v~vwd~~~--~~~~--------------------------------------~~~-~~~~~~v~~v~~~-p~~--- 475 (513)
.|+.|++|++.+ ++.. ..+ ..|..+|++++|. +++
T Consensus 263 ~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~ 342 (372)
T 1k8k_C 263 HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKC 342 (372)
T ss_dssp TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSC
T ss_pred eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcce
Confidence 899999999988 5310 222 4788999999977 555
Q ss_pred ceEEeeCCCee
Q 037288 476 SMGPQIEGKIH 486 (513)
Q Consensus 476 ~~~~t~~~~~~ 486 (513)
.+++|++.|-.
T Consensus 343 ~~l~s~~~Dg~ 353 (372)
T 1k8k_C 343 SQFCTTGMDGG 353 (372)
T ss_dssp SEEEEEETTSE
T ss_pred eeEEEecCCCc
Confidence 78888887744
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.9e-25 Score=221.79 Aligned_cols=219 Identities=13% Similarity=0.073 Sum_probs=179.9
Q ss_pred cccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccc
Q 037288 254 SFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRG 331 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 331 (513)
+|...|.+++|+|++.+|++|+. +.|++|| .++.....+. |...|.+++|+|++++|++++.||.|++||+.+++..
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 47889999999999999998865 4599999 4555555555 7888999999999999999999999999999888753
Q ss_pred cccccccccCcC---------------eEEEeeCC--eEEEeE-------eecccCcccceeEe-ecCCCceEEEEEcCC
Q 037288 332 CSSRAGRRHRIP---------------YSRLQRND--RVTNEQ-------WFELKANIWPSHTT-FMPSSISCLQSLQLY 386 (513)
Q Consensus 332 ~~~~~~~~h~~~---------------v~~v~~~~--~~~s~~-------w~~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 386 (513)
..+..+... +.++.|++ .+++++ |+...+... ..+ .+...+.++ .++|+
T Consensus 185 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~--~~~~~~~~~i~~~-~~~~~ 258 (425)
T 1r5m_A 185 ---QHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPT--GKLIGHHGPISVL-EFNDT 258 (425)
T ss_dssp ---EEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCS--EEECCCSSCEEEE-EEETT
T ss_pred ---EEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCcee--eeeccCCCceEEE-EECCC
Confidence 356666655 88888888 666665 887766533 233 345566665 78889
Q ss_pred CCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCe
Q 037288 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP 466 (513)
Q Consensus 387 ~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v 466 (513)
+++|++++.|+.|++||++ ....+..+.+|...+.. ++|+|++ +|++++.||.|++||+.+++++..+..|...|
T Consensus 259 ~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~i~~--~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 333 (425)
T 1r5m_A 259 NKLLLSASDDGTLRIWHGG--NGNSQNCFYGHSQSIVS--ASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI 333 (425)
T ss_dssp TTEEEEEETTSCEEEECSS--SBSCSEEECCCSSCEEE--EEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE
T ss_pred CCEEEEEcCCCEEEEEECC--CCccceEecCCCccEEE--EEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccE
Confidence 9999999999999999997 55688889999998877 8899999 99999999999999999999999999999999
Q ss_pred EEEEEcCCCceEEeeCCC
Q 037288 467 SAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 467 ~~v~~~p~~~~~~t~~~~ 484 (513)
.+++|+|++.++++++.+
T Consensus 334 ~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 334 FAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp EEEEECTTSSEEEEEETT
T ss_pred EEEEEcCCCCEEEEEECC
Confidence 999999998777777655
No 62
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=3.7e-25 Score=220.54 Aligned_cols=242 Identities=11% Similarity=0.079 Sum_probs=185.6
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcC-CCCEEEEEe-CCeEEEEECCCCcEEEEeee---C
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT-NPSQAVIGT-NLGAAMVDMETGMASWVCRS---K 296 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~-~g~~l~s~s-~~~i~vwd~~~~~~~~~~~~---~ 296 (513)
.+|.+.+|++.+.... ......+|...|.+++|+| ++.+|++++ |+.|++||+.+........+ .
T Consensus 94 ~dg~i~iwd~~~~~~~----------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 163 (383)
T 3ei3_B 94 KGGDIILWDYDVQNKT----------SFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWD 163 (383)
T ss_dssp BTSCEEEEETTSTTCE----------EEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSS
T ss_pred CCCeEEEEeCCCcccc----------eeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCC
Confidence 4788888988744322 1222357999999999999 778888886 45699999997554444333 3
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC----eEEEeE-------eecccCcc
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKANI 365 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~~ 365 (513)
..|.+++|+|++++|++|+.|+.|++||++ ++. +..+.+|...|.+++|+| .+++++ |+......
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~---~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHE---IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD 239 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETT-SCE---EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS
T ss_pred CCeEEEEECCCCCEEEEECCCCCEEEEECC-CCE---EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc
Confidence 679999999999999999999999999995 333 558889999999999999 366666 99887442
Q ss_pred --cceeEeecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCCccceEEecCCC-------Cce--------eEEEE
Q 037288 366 --WPSHTTFMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHV-------NSH--------TRIQL 427 (513)
Q Consensus 366 --~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~-------~~v--------~~~~~ 427 (513)
.....+.+...+.++ .|+| ++++|++++.|+.|++||++ ....+..+.+|. ..+ ..+.+
T Consensus 240 ~~~~~~~~~~~~~v~~~-~~s~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 316 (383)
T 3ei3_B 240 KNSYIAEMPHEKPVNAA-YFNPTDSTKLLTTDQRNEIRVYSSY--DWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVA 316 (383)
T ss_dssp TTCEEEEEECSSCEEEE-EECTTTSCEEEEEESSSEEEEEETT--BTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEE
T ss_pred ccceEEEecCCCceEEE-EEcCCCCCEEEEEcCCCcEEEEECC--CCccccccccccccccccccceEEeccCCCCceEE
Confidence 233445677777776 7888 99999999999999999997 444555555443 221 12235
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC--CCCCeEEEEEcCCCceEEeeC
Q 037288 428 GVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF--SNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 428 ~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~~t~~ 482 (513)
+|+|++++ +|+.||.|++||+.+++++..+.. +...+..++|+|++.++++++
T Consensus 317 ~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 317 GRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp ECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred EecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 66677766 778999999999999999999876 457788889999988888875
No 63
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.7e-25 Score=210.43 Aligned_cols=206 Identities=18% Similarity=0.192 Sum_probs=163.6
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee-eCCCe
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR-SKSDI 299 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-~~~~V 299 (513)
.+|.+.+|++...... ..+..+.+|...|.+++| ++.++++++ ++.|++|| .+.....+. |...|
T Consensus 79 ~dg~i~~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v 145 (313)
T 3odt_A 79 KDTMINGVPLFATSGE---------DPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASV 145 (313)
T ss_dssp TTSCEEEEETTCCTTS---------CC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCE
T ss_pred CCCeEEEEEeeecCCC---------CcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCce
Confidence 4778888887754322 124557899999999999 567888776 55699999 455554444 78889
Q ss_pred EEEEEec-CCcEEEEEeCCCeEEEEECCCCccccccccccc-cCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCc
Q 037288 300 LAQQVIH-SGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRR-HRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSI 377 (513)
Q Consensus 300 ~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v 377 (513)
.+++|+| +++.+++++.||.|++||.... ...+.. |...+.++
T Consensus 146 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-----~~~~~~~~~~~i~~~------------------------------ 190 (313)
T 3odt_A 146 WDAKVVSFSENKFLTASADKTIKLWQNDKV-----IKTFSGIHNDVVRHL------------------------------ 190 (313)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEETTEE-----EEEECSSCSSCEEEE------------------------------
T ss_pred eEEEEccCCCCEEEEEECCCCEEEEecCce-----EEEEeccCcccEEEE------------------------------
Confidence 9999998 8999999999999999994322 224444 56666653
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 037288 378 SCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVF 457 (513)
Q Consensus 378 ~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~ 457 (513)
.+++++. |++++.||.|++||++ ....+..+.+|...+.. ++|+|++ .|++++.||.|++||+.+++++.
T Consensus 191 ----~~~~~~~-~~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~i~~--~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 191 ----AVVDDGH-FISCSNDGLIKLVDMH--TGDVLRTYEGHESFVYC--IKLLPNG-DIVSCGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp ----EEEETTE-EEEEETTSEEEEEETT--TCCEEEEEECCSSCEEE--EEECTTS-CEEEEETTSEEEEECTTTCCEEE
T ss_pred ----EEcCCCe-EEEccCCCeEEEEECC--chhhhhhhhcCCceEEE--EEEecCC-CEEEEecCCEEEEEECCCCceeE
Confidence 4556777 8999999999999997 55688899999999877 8999999 58999999999999999999999
Q ss_pred EecCCCCCeEEEEEcCCCceEEeeCCCe
Q 037288 458 EDKFSNSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 458 ~~~~~~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
.+..|...|.+++|+|++.+++++..+.
T Consensus 261 ~~~~~~~~i~~~~~~~~~~~~~~~~dg~ 288 (313)
T 3odt_A 261 VITLPAISIWSVDCMSNGDIIVGSSDNL 288 (313)
T ss_dssp EEECSSSCEEEEEECTTSCEEEEETTSC
T ss_pred EEeccCceEEEEEEccCCCEEEEeCCCc
Confidence 9999999999999999977666554443
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=9.8e-26 Score=221.70 Aligned_cols=243 Identities=13% Similarity=0.135 Sum_probs=187.0
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCC---CCEEEEEe-CCeEEEEECCCCc-EEEEee-e
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTN---PSQAVIGT-NLGAAMVDMETGM-ASWVCR-S 295 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~---g~~l~s~s-~~~i~vwd~~~~~-~~~~~~-~ 295 (513)
.+|.+.+|++.+.... .....+|...|.+++|+|+ +.+|++|+ ++.|++||+.+++ ....+. |
T Consensus 42 ~d~~v~iw~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 110 (357)
T 3i2n_A 42 GTGVIQLYEIQHGDLK-----------LLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGH 110 (357)
T ss_dssp CCEEEEEEEECSSSEE-----------EEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred CCcEEEEEeCCCCccc-----------ceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEec
Confidence 3788888888743321 1224479999999999998 68888886 5569999999887 555554 8
Q ss_pred CCCeEEEEE------ecCCcEEEEEeCCCeEEEEECCCCccccccccccccC----cCeEEEe----eCC---eEEEeE-
Q 037288 296 KSDILAQQV------IHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHR----IPYSRLQ----RND---RVTNEQ- 357 (513)
Q Consensus 296 ~~~V~~l~~------~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~----~~v~~v~----~~~---~~~s~~- 357 (513)
...|.+++| +|++++|++|+.||.|++||++..... +..+..|. ..+.++. |++ .+++++
T Consensus 111 ~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 188 (357)
T 3i2n_A 111 KEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDP--VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD 188 (357)
T ss_dssp SSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSC--SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET
T ss_pred ccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCc--ceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc
Confidence 888999965 678999999999999999999987621 33444443 3889988 555 566665
Q ss_pred ------eecccCcccceeEeecCCCceEEEEEcC---CCCEEEEEecCCeEEEEecCCCCccceEEe-----cCCCCcee
Q 037288 358 ------WFELKANIWPSHTTFMPSSISCLQSLQL---YDQYFLASSMDGTVKLYDHRLTTRGAVQSY-----EGHVNSHT 423 (513)
Q Consensus 358 ------w~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~-----~~h~~~v~ 423 (513)
|+...+.. .....+...+.++ .++| ++.+|++++.||.|++||++ ...++..+ .+|...+.
T Consensus 189 d~~i~i~d~~~~~~--~~~~~~~~~v~~~-~~~~~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~v~ 263 (357)
T 3i2n_A 189 NGDIKLFDLRNMAL--RWETNIKNGVCSL-EFDRKDISMNKLVATSLEGKFHVFDMR--TQHPTKGFASVSEKAHKSTVW 263 (357)
T ss_dssp TSEEEEEETTTTEE--EEEEECSSCEEEE-EESCSSSSCCEEEEEESTTEEEEEEEE--EEETTTEEEEEEEECCSSCEE
T ss_pred CCeEEEEECccCce--eeecCCCCceEEE-EcCCCCCCCCEEEEECCCCeEEEEeCc--CCCcccceeeeccCCCcCCEE
Confidence 88887764 3345566677775 7888 89999999999999999997 33344333 48999887
Q ss_pred EEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC-------------------eEEEEecCCCCCeEEEEEcCCCceEE-eeC
Q 037288 424 RIQLGVDQSER-FVMSGGEDCKLRIWSIRSG-------------------ELVFEDKFSNSVPSAVCWRTQRSMGP-QIE 482 (513)
Q Consensus 424 ~~~~~~s~~g~-~l~sg~~Dg~v~vwd~~~~-------------------~~~~~~~~~~~~v~~v~~~p~~~~~~-t~~ 482 (513)
. ++|+|+++ +|++|+.||.|++||+.++ +++..+..|..+|++++|+|++.+++ +++
T Consensus 264 ~--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~ 341 (357)
T 3i2n_A 264 Q--VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS 341 (357)
T ss_dssp E--EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE
T ss_pred E--EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec
Confidence 7 88999998 8999999999999999854 46777888999999999999976665 565
Q ss_pred CC
Q 037288 483 GK 484 (513)
Q Consensus 483 ~~ 484 (513)
.|
T Consensus 342 ~d 343 (357)
T 3i2n_A 342 FD 343 (357)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=1.4e-24 Score=211.41 Aligned_cols=226 Identities=10% Similarity=0.057 Sum_probs=183.7
Q ss_pred EEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcE---EEEe---eeCCCeEEEEEecCCcEEEEEeCCCeEEEE
Q 037288 250 HLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMA---SWVC---RSKSDILAQQVIHSGNVVLCGFRNGAIVTV 323 (513)
Q Consensus 250 ~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~---~~~~---~~~~~V~~l~~~~~~~~l~sg~~dg~i~iw 323 (513)
....+|...|.+++|+|+++++++++++.|++||+.++.. ...+ .|...|.+++|+|++++|++|+.||.|++|
T Consensus 45 ~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred ceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3455899999999999999999999988899999987642 2222 477889999999999999999999999999
Q ss_pred ECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEee-cCCCceEEEEEcCCCCEEEE
Q 037288 324 DVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLA 392 (513)
Q Consensus 324 d~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s 392 (513)
|++.++... ...+..|...|.+++|+| .+++++ |+...++. ...+. +...+.++ .++|++++|++
T Consensus 125 d~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~--~~~~~~~~~~i~~~-~~~~~~~~l~~ 200 (337)
T 1gxr_A 125 DLAAPTPRI-KAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL--VRQFQGHTDGASCI-DISNDGTKLWT 200 (337)
T ss_dssp ECCCC--EE-EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEE-EECTTSSEEEE
T ss_pred ECCCCCcce-eeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce--eeeeecccCceEEE-EECCCCCEEEE
Confidence 999887433 557888999999999998 566665 88876653 23333 45566665 78899999999
Q ss_pred EecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEc
Q 037288 393 SSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWR 472 (513)
Q Consensus 393 ~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~ 472 (513)
++.||.|++||++ ....+..+. |...+.. ++|+|++++|++++.|+.|++||+.+++.. .+..|...|.+++|+
T Consensus 201 ~~~dg~i~~~d~~--~~~~~~~~~-~~~~v~~--~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~ 274 (337)
T 1gxr_A 201 GGLDNTVRSWDLR--EGRQLQQHD-FTSQIFS--LGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFA 274 (337)
T ss_dssp EETTSEEEEEETT--TTEEEEEEE-CSSCEEE--EEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEEC
T ss_pred EecCCcEEEEECC--CCceEeeec-CCCceEE--EEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEEC
Confidence 9999999999997 444565554 6666666 899999999999999999999999998865 566788899999999
Q ss_pred CCCceEEeeCCCe
Q 037288 473 TQRSMGPQIEGKI 485 (513)
Q Consensus 473 p~~~~~~t~~~~~ 485 (513)
|++.++++++.+-
T Consensus 275 ~~~~~l~~~~~dg 287 (337)
T 1gxr_A 275 YCGKWFVSTGKDN 287 (337)
T ss_dssp TTSSEEEEEETTS
T ss_pred CCCCEEEEecCCC
Confidence 9987777776553
No 66
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=1.1e-24 Score=221.76 Aligned_cols=235 Identities=20% Similarity=0.256 Sum_probs=189.9
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee-eCCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR-SKSD 298 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-~~~~ 298 (513)
..+|.+.+|++.+. ..+..+.+|...|.+++|+ +..+++|+ |+.|++||+.+++.+..+. |...
T Consensus 176 ~~dg~i~vwd~~~~------------~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~ 241 (445)
T 2ovr_B 176 STDRTLKVWNAETG------------ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA 241 (445)
T ss_dssp ETTSCEEEEETTTT------------EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSC
T ss_pred eCCCeEEEEECCcC------------cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCccc
Confidence 35788888887643 2356688999999999995 56677775 5569999999998877665 7788
Q ss_pred eEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC-eEEEeE-------eecccCcccceeE
Q 037288 299 ILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPSHT 370 (513)
Q Consensus 299 V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~~~ 370 (513)
|.+++| +++.|++|+.||.|++||+++++. +..+.+|...|.+++|.. .+++++ |+...++.. ..
T Consensus 242 v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~ 314 (445)
T 2ovr_B 242 VRCVQY--DGRRVVSGAYDFMVKVWDPETETC---LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCI--HT 314 (445)
T ss_dssp EEEEEE--CSSCEEEEETTSCEEEEEGGGTEE---EEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEE--EE
T ss_pred EEEEEE--CCCEEEEEcCCCEEEEEECCCCcE---eEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEE--EE
Confidence 999999 789999999999999999998775 457889999999999977 777776 888776643 23
Q ss_pred ee-cCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecC---CCCceeEEEEEEcCCCCEEEEEeCCCcEE
Q 037288 371 TF-MPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEG---HVNSHTRIQLGVDQSERFVMSGGEDCKLR 446 (513)
Q Consensus 371 ~~-~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~---h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~ 446 (513)
+. +...+.++ .+++++|++|+.||.|++||++ ...++..+.+ |...+.+ ++|+ +++|++|+.||.|+
T Consensus 315 ~~~~~~~v~~~---~~~~~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~v~~--~~~~--~~~l~s~~~dg~v~ 385 (445)
T 2ovr_B 315 LTGHQSLTSGM---ELKDNILVSGNADSTVKIWDIK--TGQCLQTLQGPNKHQSAVTC--LQFN--KNFVITSSDDGTVK 385 (445)
T ss_dssp ECCCCSCEEEE---EEETTEEEEEETTSCEEEEETT--TCCEEEEECSTTSCSSCEEE--EEEC--SSEEEEEETTSEEE
T ss_pred EcCCcccEEEE---EEeCCEEEEEeCCCeEEEEECC--CCcEEEEEccCCCCCCCEEE--EEEC--CCEEEEEeCCCeEE
Confidence 33 33344443 3368899999999999999997 5557888876 7777766 6664 78999999999999
Q ss_pred EEeCCCCeEEEEe-----cCCCCCeEEEEEcCCCceEEeeCCCe
Q 037288 447 IWSIRSGELVFED-----KFSNSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 447 vwd~~~~~~~~~~-----~~~~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
+||+.+++.+..+ ..+.+.|++++|+|++.++++++.|-
T Consensus 386 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 386 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp EEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred EEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 9999999999887 46778899999999998888877764
No 67
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=1.9e-25 Score=214.88 Aligned_cols=185 Identities=10% Similarity=0.074 Sum_probs=142.9
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCC--CCEEEEEeC-CeEEEEECCCCc---EEEEee
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTN--PSQAVIGTN-LGAAMVDMETGM---ASWVCR 294 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~--g~~l~s~s~-~~i~vwd~~~~~---~~~~~~ 294 (513)
..+|.+.+|++.+... ..+..+.+|...|.+++|+|+ +.+|++|+. +.|++||+.++. ......
T Consensus 74 s~D~~v~iWd~~~~~~----------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 143 (297)
T 2pm7_B 74 SYDGKVMIWKEENGRW----------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA 143 (297)
T ss_dssp ETTTEEEEEEBSSSCB----------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC
T ss_pred cCCCEEEEEEcCCCce----------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec
Confidence 3578899998864321 124557889999999999997 888988865 559999998763 233445
Q ss_pred eCCCeEEEEEecC-------------CcEEEEEeCCCeEEEEECCCCcccc-ccccccccCcCeEEEeeCCeEEEeEeec
Q 037288 295 SKSDILAQQVIHS-------------GNVVLCGFRNGAIVTVDVRKRQRGC-SSRAGRRHRIPYSRLQRNDRVTNEQWFE 360 (513)
Q Consensus 295 ~~~~V~~l~~~~~-------------~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~~~~~s~~w~~ 360 (513)
|...|.+++|+|+ +++|++|+.|++|++||++...... ....+.+|...|.+++|+
T Consensus 144 h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s---------- 213 (297)
T 2pm7_B 144 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS---------- 213 (297)
T ss_dssp CSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC----------
T ss_pred ccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC----------
Confidence 8888999999997 5799999999999999998765211 134678899988886664
Q ss_pred ccCcccceeEeecCCCceEEEEEcCC---CCEEEEEecCCeEEEEecCCCCcc-ceEEe--cCCCCceeEEEEEEcCCCC
Q 037288 361 LKANIWPSHTTFMPSSISCLQSLQLY---DQYFLASSMDGTVKLYDHRLTTRG-AVQSY--EGHVNSHTRIQLGVDQSER 434 (513)
Q Consensus 361 ~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~s~s~dg~i~lwd~~~~~~~-~~~~~--~~h~~~v~~~~~~~s~~g~ 434 (513)
|+ +.+|++++.|++|++||++..... ....+ .+|...+.. ++|+|+|+
T Consensus 214 ------------------------p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~g~ 267 (297)
T 2pm7_B 214 ------------------------PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR--ASWSLSGN 267 (297)
T ss_dssp ------------------------CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEE--EEECSSSC
T ss_pred ------------------------CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEE--EEECCCCC
Confidence 45 489999999999999999732111 12233 467777765 89999999
Q ss_pred EEEEEeCCCcEEEEeCC
Q 037288 435 FVMSGGEDCKLRIWSIR 451 (513)
Q Consensus 435 ~l~sg~~Dg~v~vwd~~ 451 (513)
+|++++.||.|+||+..
T Consensus 268 ~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 268 VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CEEEEETTSCEEEEEEC
T ss_pred EEEEEcCCCcEEEEEEC
Confidence 99999999999999976
No 68
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.8e-26 Score=237.03 Aligned_cols=214 Identities=15% Similarity=0.025 Sum_probs=155.6
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCc-EEE-EeeeCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGM-ASW-VCRSKS 297 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~-~~~-~~~~~~ 297 (513)
..+|.+.+|++........ ...........+.+|...|.+++|++++ .|++|+ |++|++||+.++. +.. ...|..
T Consensus 232 s~DgtvrlWd~~~~~~~~~-~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~ 309 (524)
T 2j04_B 232 SQEGTINFLEIIDNATDVH-VFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS 309 (524)
T ss_dssp ETTSCEEEEECCCCSSSSS-EEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSS
T ss_pred ecCCeEEEEEcCCCccccc-cceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccc
Confidence 3578999999875432100 0001112245688999999999999865 677775 5669999999764 333 345888
Q ss_pred CeEEE--EEecCC-cEEEEEeCCCeEEEEECCCCccccccccccccCc--CeEEEeeCCeEEEeEeecccCcccceeEee
Q 037288 298 DILAQ--QVIHSG-NVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRI--PYSRLQRNDRVTNEQWFELKANIWPSHTTF 372 (513)
Q Consensus 298 ~V~~l--~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~ 372 (513)
.|.+| +|++++ ++|++|+.|++|++||+++.+... .+.+|.. .|.+
T Consensus 310 ~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~---~~~~~~~~~~v~~-------------------------- 360 (524)
T 2j04_B 310 YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK---TTVSRFRGSNLVP-------------------------- 360 (524)
T ss_dssp CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC---EEEEECSCCSCCC--------------------------
T ss_pred cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc---ccccccccCcccc--------------------------
Confidence 99999 577888 899999999999999998766422 3334421 2333
Q ss_pred cCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 037288 373 MPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRS 452 (513)
Q Consensus 373 ~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~ 452 (513)
+.|+|+++.|++++.|++|++||++ ...++.++.+|.+.|.. ++|+|+|++|++|+.||+|++||+..
T Consensus 361 --------v~fsp~~~~l~s~~~d~tv~lwd~~--~~~~~~~l~gH~~~V~s--va~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 361 --------VVYCPQIYSYIYSDGASSLRAVPSR--AAFAVHPLVSRETTITA--IGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp --------EEEETTTTEEEEECSSSEEEEEETT--CTTCCEEEEECSSCEEE--EECCSSCCBCEEEETTTEEECCBSCS
T ss_pred --------eEeCCCcCeEEEeCCCCcEEEEECc--ccccceeeecCCCceEE--EEeCCCCCeEEEEECCCEEEEEechH
Confidence 3677899999999999999999998 55577888899999877 89999999999999999999999865
Q ss_pred CeEEEEec-----CCCCCeEEEEEcCCCceE
Q 037288 453 GELVFEDK-----FSNSVPSAVCWRTQRSMG 478 (513)
Q Consensus 453 ~~~~~~~~-----~~~~~v~~v~~~p~~~~~ 478 (513)
+ .+...+ .+...+..++|+|++.++
T Consensus 429 ~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 429 R-LLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp S-TTTCC------CCCCEEEECBCCSSSCEE
T ss_pred h-hccccccCccceeeeEEEEeccCCCCCeE
Confidence 4 221111 111236678888876544
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=7.4e-25 Score=240.00 Aligned_cols=243 Identities=14% Similarity=0.133 Sum_probs=201.5
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCe
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDI 299 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V 299 (513)
.+|.+.+|++.+.. .+..+.+|...|.+++|+|++++|++|++ +.|++||+.+++.+..+. |...|
T Consensus 33 ~~g~v~iwd~~~~~------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v 100 (814)
T 3mkq_A 33 YSGRVEIWNYETQV------------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYI 100 (814)
T ss_dssp TTSEEEEEETTTTE------------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred CCCEEEEEECCCCc------------eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCE
Confidence 46788888876422 34568899999999999999999998865 559999999999877766 88889
Q ss_pred EEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC----eEEEeE-------eecccCcccce
Q 037288 300 LAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKANIWPS 368 (513)
Q Consensus 300 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~~~~~ 368 (513)
.+++|+|++..|++|+.||.|++||+..+... ...+.+|..+|.+++|+| .+++++ |+...+.....
T Consensus 101 ~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~--~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 178 (814)
T 3mkq_A 101 RSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL--EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT 178 (814)
T ss_dssp EEEEECSSSSEEEEEETTSEEEEEEGGGTSEE--EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEE
T ss_pred EEEEEeCCCCEEEEEcCCCEEEEEECCCCceE--EEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeE
Confidence 99999999999999999999999999876321 457889999999999987 566665 88876654433
Q ss_pred eEeecCCCceEEEEEcC--CCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEE
Q 037288 369 HTTFMPSSISCLQSLQL--YDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446 (513)
Q Consensus 369 ~~~~~~~~v~~~~~~~~--~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~ 446 (513)
....+...+.++ .++| ++.+|++++.||.|++||++ ....+..+.+|...+.. ++|+|++++|++|+.||.|+
T Consensus 179 ~~~~~~~~v~~~-~~~~~~~~~~l~~~~~dg~i~~~d~~--~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~dg~v~ 253 (814)
T 3mkq_A 179 LTTGQERGVNYV-DYYPLPDKPYMITASDDLTIKIWDYQ--TKSCVATLEGHMSNVSF--AVFHPTLPIIISGSEDGTLK 253 (814)
T ss_dssp EECCCTTCCCEE-EECCSTTCCEEEEECTTSEEEEEETT--TTEEEEEEECCSSCEEE--EEECSSSSEEEEEETTSCEE
T ss_pred EecCCCCCEEEE-EEEECCCCCEEEEEeCCCEEEEEECC--CCcEEEEEcCCCCCEEE--EEEcCCCCEEEEEeCCCeEE
Confidence 333333566665 6777 89999999999999999997 55588889999998877 88999999999999999999
Q ss_pred EEeCCCCeEEEEecCCCCCeEEEEEcCCCc--eEEeeCC
Q 037288 447 IWSIRSGELVFEDKFSNSVPSAVCWRTQRS--MGPQIEG 483 (513)
Q Consensus 447 vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~--~~~t~~~ 483 (513)
+||+.+++.+..+..+...+.+++|+|++. +++++..
T Consensus 254 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 292 (814)
T 3mkq_A 254 IWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFD 292 (814)
T ss_dssp EEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEET
T ss_pred EEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeC
Confidence 999999999999999999999999999964 3444443
No 70
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.5e-26 Score=233.24 Aligned_cols=169 Identities=11% Similarity=0.069 Sum_probs=138.1
Q ss_pred ccCcEEEEE--EcCCCCEEEEEeC-CeEEEEECCCCcEEEEee---eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCC
Q 037288 255 FKCTVWTAD--FCTNPSQAVIGTN-LGAAMVDMETGMASWVCR---SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKR 328 (513)
Q Consensus 255 h~~~V~~~~--~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~---~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 328 (513)
+...+.++. +++++.++++|+. +.|++||+.+++.+..+. |...|.+++|+|++++|++|+.||.|++||++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 566777777 5678999998865 559999999999877776 6788999999999999999999999999999987
Q ss_pred cccccccccc-ccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 037288 329 QRGCSSRAGR-RHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLT 407 (513)
Q Consensus 329 ~~~~~~~~~~-~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~ 407 (513)
+. +..+. .|..+|.++.|+| .+++++.+|++|+.||.|++||++
T Consensus 247 ~~---~~~~~~~~~~~v~~~~~~~------------------------------~~s~~~~~l~s~~~dg~i~iwd~~-- 291 (437)
T 3gre_A 247 VL---IRSWSFGDHAPITHVEVCQ------------------------------FYGKNSVIVVGGSSKTFLTIWNFV-- 291 (437)
T ss_dssp EE---EEEEBCTTCEEEEEEEECT------------------------------TTCTTEEEEEEESTTEEEEEEETT--
T ss_pred cE---EEEEecCCCCceEEEEecc------------------------------ccCCCccEEEEEcCCCcEEEEEcC--
Confidence 65 33544 6777888877754 456788999999999999999997
Q ss_pred CccceEEecCC--------------------------CCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC
Q 037288 408 TRGAVQSYEGH--------------------------VNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF 461 (513)
Q Consensus 408 ~~~~~~~~~~h--------------------------~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~ 461 (513)
...++..+.+| ...+.+ ++|+ ++++|++|+.||.|++||+.+++.+..+..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~--l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALST--ISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCC--EEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEE--EEEC-CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 44466666544 444555 7777 778999999999999999999988877765
No 71
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=7.7e-25 Score=211.79 Aligned_cols=221 Identities=13% Similarity=0.083 Sum_probs=171.1
Q ss_pred EEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee---eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccc
Q 037288 259 VWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR---SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSR 335 (513)
Q Consensus 259 V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~---~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 335 (513)
+++++||+++ +||+|.|++|+|||+.+++++.++. |...|++++|+|++++|++|+.||+|++||+++++. +.
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~---~~ 103 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR---LR 103 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE---EE
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee---EE
Confidence 5789999876 8899999999999999999877764 566799999999999999999999999999999876 45
Q ss_pred cccccCcCeEEEeeCC-eEEEeE-------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 037288 336 AGRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLT 407 (513)
Q Consensus 336 ~~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~ 407 (513)
.+.+|...+.++.+.+ .+++++ |+.............+...+.. ..+.+++++|++++.|+.|++||++..
T Consensus 104 ~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 104 NMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG-LRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp EEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE-EEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred EecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEE-EEEcCCCCEEEEEecCcceeEEECCCC
Confidence 8899999999998888 566665 4444433222222233444444 578889999999999999999998742
Q ss_pred Ccc--ceEEecC--------------------------------------------CCCceeEEEEEEcCCCCEEEEEe-
Q 037288 408 TRG--AVQSYEG--------------------------------------------HVNSHTRIQLGVDQSERFVMSGG- 440 (513)
Q Consensus 408 ~~~--~~~~~~~--------------------------------------------h~~~v~~~~~~~s~~g~~l~sg~- 440 (513)
+.. ....... +...+ ..+.|+|+++.+++++
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQV--CSILWSPHYKELISGHG 260 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCE--EEEEEETTTTEEEEEEC
T ss_pred cccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeee--eeeeecccccceEEEEE
Confidence 111 1111111 11222 2367788888877654
Q ss_pred -CCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 441 -EDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 441 -~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
.|+.|++||+.+++++.++.+|.+.|++++|+|++.+++|++.|-.
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 7999999999999999999999999999999999988998887743
No 72
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.1e-26 Score=237.99 Aligned_cols=207 Identities=8% Similarity=-0.035 Sum_probs=164.9
Q ss_pred CCeEEEEECCCCcEE----EEee-eCCCeEEEEEecC------CcEEEEEeCCCeEEEEECCCCccc--------ccccc
Q 037288 276 NLGAAMVDMETGMAS----WVCR-SKSDILAQQVIHS------GNVVLCGFRNGAIVTVDVRKRQRG--------CSSRA 336 (513)
Q Consensus 276 ~~~i~vwd~~~~~~~----~~~~-~~~~V~~l~~~~~------~~~l~sg~~dg~i~iwd~~~~~~~--------~~~~~ 336 (513)
|++|+|||+.+++.. ..+. |.+.|.+++|+|+ +.+|++|+.||+|++||+...... .....
T Consensus 182 D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~ 261 (524)
T 2j04_B 182 SSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLT 261 (524)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEE
T ss_pred CceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEE
Confidence 345999999877632 2233 5678999999997 579999999999999999866421 01236
Q ss_pred ccccCcCeEEEeeCC--eEEEeE-------eecccCcccceeEeecCCCceEEE-EEcCCC-CEEEEEecCCeEEEEecC
Q 037288 337 GRRHRIPYSRLQRND--RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQ-SLQLYD-QYFLASSMDGTVKLYDHR 405 (513)
Q Consensus 337 ~~~h~~~v~~v~~~~--~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~-~~l~s~s~dg~i~lwd~~ 405 (513)
+.+|...|.+++|++ .+++|+ |++..+.........|...|.++. .+++++ ++|++|+.|++|+|||++
T Consensus 262 l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 262 LSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp ECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred EEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 788999999999988 778877 998876432222334677888884 678887 899999999999999997
Q ss_pred CCCccceEEecCCCC--ceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCC
Q 037288 406 LTTRGAVQSYEGHVN--SHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 406 ~~~~~~~~~~~~h~~--~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
...++.++.+|.. .+.. ++|+|++..|++++.|++|++||++++.++..+..|.+.|++|+|+|++.++++++.
T Consensus 342 --~~~~~~~~~~~~~~~~v~~--v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~ 417 (524)
T 2j04_B 342 --DIATTKTTVSRFRGSNLVP--VVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSA 417 (524)
T ss_dssp --GHHHHCEEEEECSCCSCCC--EEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEET
T ss_pred --CCCcccccccccccCcccc--eEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEEC
Confidence 5556667777754 3444 899999999999999999999999999988888889999999999999887777776
Q ss_pred Cee
Q 037288 484 KIH 486 (513)
Q Consensus 484 ~~~ 486 (513)
|-.
T Consensus 418 Dgt 420 (524)
T 2j04_B 418 DGS 420 (524)
T ss_dssp TTE
T ss_pred CCE
Confidence 644
No 73
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.94 E-value=1e-23 Score=205.86 Aligned_cols=247 Identities=11% Similarity=0.099 Sum_probs=194.3
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSD 298 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~ 298 (513)
..+|.+.+|++....... ......+.+|...|.+++|+|++++|++++. +.|++|+........... +...
T Consensus 58 s~D~~i~vWd~~~~~~~~-------~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~ 130 (340)
T 4aow_A 58 SRDKTIIMWKLTRDETNY-------GIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD 130 (340)
T ss_dssp ETTSCEEEEEECCSSSCS-------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred cCCCeEEEEECCCCCccc-------ceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCc
Confidence 357889999987543321 1135668999999999999999999998865 459999999887666555 5667
Q ss_pred eEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC-----eEEEeE-------eecccCccc
Q 037288 299 ILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND-----RVTNEQ-------WFELKANIW 366 (513)
Q Consensus 299 V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~-----~~~s~~-------w~~~~~~~~ 366 (513)
+..+.++++++.|++|+.|+.+++||+...... ...+.+|...+..++|++ .+++++ |+...+...
T Consensus 131 ~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~ 208 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY--TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK 208 (340)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTTSCEEE--EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE
T ss_pred eeEEEEeecCccceeecCCCeEEEEEeCCCceE--EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee
Confidence 899999999999999999999999999866432 346788999999999987 455665 887766543
Q ss_pred ceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEE
Q 037288 367 PSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446 (513)
Q Consensus 367 ~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~ 446 (513)
. ....+...|.++ .++|++++|++|+.||.|++||++ ...++..+..+ ..+.. +.|+|++.+ ++++.|+.|+
T Consensus 209 ~-~~~~h~~~v~~~-~~s~~~~~l~s~s~Dg~i~iwd~~--~~~~~~~~~~~-~~v~~--~~~~~~~~~-~~~~~d~~i~ 280 (340)
T 4aow_A 209 T-NHIGHTGYLNTV-TVSPDGSLCASGGKDGQAMLWDLN--EGKHLYTLDGG-DIINA--LCFSPNRYW-LCAATGPSIK 280 (340)
T ss_dssp E-EECCCSSCEEEE-EECTTSSEEEEEETTCEEEEEETT--TTEEEEEEECS-SCEEE--EEECSSSSE-EEEEETTEEE
T ss_pred e-EecCCCCcEEEE-EECCCCCEEEEEeCCCeEEEEEec--cCceeeeecCC-ceEEe--eecCCCCce-eeccCCCEEE
Confidence 1 122355667775 789999999999999999999997 55577777755 45555 888998865 5566799999
Q ss_pred EEeCCCCeEEEEec---------CCCCCeEEEEEcCCCceEEeeCCC
Q 037288 447 IWSIRSGELVFEDK---------FSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 447 vwd~~~~~~~~~~~---------~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+||++++..+..+. .|...|++++|+|++.++++++.|
T Consensus 281 iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 281 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp EEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 99999988777653 567889999999998888887766
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=1.7e-24 Score=248.07 Aligned_cols=330 Identities=12% Similarity=0.122 Sum_probs=232.3
Q ss_pred eeeeCCCCceeeeeEEeccccCeEEEEEeecccccccceeEEeeeccccccccccccccCCCCCccccCcceeeecccce
Q 037288 112 LNVQTPEGQFRTDVLLTGSVNGFFSLFEVGNVGQHAHDTVKFIPSCVWPRIKDNKTESSKAPEHIWRLNKASILMPSSVS 191 (513)
Q Consensus 112 ~~~~~~~g~~~~~~l~tg~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~s~i~ 191 (513)
...++|+|. .+++|+.||.|++|++.+.... . .-..+...+..+.|+|++..+...+.=.
T Consensus 620 ~~~~s~~~~----~l~s~~~d~~i~vw~~~~~~~~-----~-----------~~~~h~~~v~~~~~s~~~~~l~s~~~d~ 679 (1249)
T 3sfz_A 620 HACFSQDGQ----RIASCGADKTLQVFKAETGEKL-----L-----------DIKAHEDEVLCCAFSSDDSYIATCSADK 679 (1249)
T ss_dssp EEEECTTSS----EEEEEETTSCEEEEETTTCCEE-----E-----------EECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEECCCCC----EEEEEeCCCeEEEEECCCCCEE-----E-----------EeccCCCCEEEEEEecCCCEEEEEeCCC
Confidence 345677764 6999999999999998544211 1 1112223355666666654433322211
Q ss_pred EEEec---C-----------CCCccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEeccccC
Q 037288 192 CIKLF---G-----------KHPSCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKC 257 (513)
Q Consensus 192 si~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 257 (513)
.|.+. . ....+..+.|.....++ ..+..+|.+.+|++.+. ..+..+.+|..
T Consensus 680 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l---~sg~~d~~v~vwd~~~~------------~~~~~~~~h~~ 744 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLL---ATGSNDFFLKLWDLNQK------------ECRNTMFGHTN 744 (1249)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEE---EEEETTSCEEEEETTSS------------SEEEEECCCSS
T ss_pred eEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEE---EEEeCCCeEEEEECCCc------------chhheecCCCC
Confidence 12211 1 11111112221111111 12345677877877643 24567889999
Q ss_pred cEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEe-------------------------------------------
Q 037288 258 TVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVC------------------------------------------- 293 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~------------------------------------------- 293 (513)
.|.+++|+|++.++++++. +.|++||+.++.....+
T Consensus 745 ~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~ 824 (1249)
T 3sfz_A 745 SVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLF 824 (1249)
T ss_dssp CEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEE
T ss_pred CEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEE
Confidence 9999999999999998865 56999998776533221
Q ss_pred -------------eeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE
Q 037288 294 -------------RSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ 357 (513)
Q Consensus 294 -------------~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~ 357 (513)
.|...|.+++|+|++.++++|+.||.|++||+.++.. +..+.+|...|.+++|+| .+++++
T Consensus 825 d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 825 DIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK---VADCRGHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp ETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE---EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce---eeecCCCccceEEEEECCCCCEEEEEe
Confidence 3556789999999999999999999999999998875 458889999999999999 677776
Q ss_pred -------eecccCccc------------------------------------ceeEeecCCCceEEEEEcCCCCEEEEEe
Q 037288 358 -------WFELKANIW------------------------------------PSHTTFMPSSISCLQSLQLYDQYFLASS 394 (513)
Q Consensus 358 -------w~~~~~~~~------------------------------------~~~~~~~~~~v~~~~~~~~~~~~l~s~s 394 (513)
|+....... ..........+.+ ..++|+++++++|+
T Consensus 902 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~sp~g~~l~~g~ 980 (1249)
T 3sfz_A 902 DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSC-CCLSPHLEYVAFGD 980 (1249)
T ss_dssp TTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEE-EEECTTSSEEEEEE
T ss_pred CCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEE-EEEcCCCCEEEEEc
Confidence 775432100 0001112234444 58899999999999
Q ss_pred cCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC
Q 037288 395 MDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ 474 (513)
Q Consensus 395 ~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~ 474 (513)
.||.|++||+. ....+..+.+|...|.. ++|+|+|++|++++.||.|++||+.+++.+. +..|...|.+++|+|+
T Consensus 981 ~~g~i~i~d~~--~~~~~~~~~~h~~~v~~--l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~~ 1055 (1249)
T 3sfz_A 981 EDGAIKIIELP--NNRVFSSGVGHKKAVRH--IQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQD 1055 (1249)
T ss_dssp TTSCCEEEETT--TTSCEEECCCCSSCCCC--EEECSSSSCEEEECSSSBEEEEETTTTEEEC-CBCCSSCEEEEEECSS
T ss_pred CCCCEEEEEcC--CCceeeecccCCCceEE--EEECCCCCEEEEEcCCCEEEEEECCCCceEE-EecCCCcEEEEEEcCC
Confidence 99999999997 55588889999999988 8999999999999999999999999998875 4577889999999999
Q ss_pred CceEEeeCCCe
Q 037288 475 RSMGPQIEGKI 485 (513)
Q Consensus 475 ~~~~~t~~~~~ 485 (513)
+.+++.+..+.
T Consensus 1056 ~~l~~~~~dg~ 1066 (1249)
T 3sfz_A 1056 SRLLSWSFDGT 1066 (1249)
T ss_dssp SEEEEEESSSE
T ss_pred CcEEEEECCCc
Confidence 87766665543
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=9.6e-25 Score=220.07 Aligned_cols=244 Identities=14% Similarity=0.141 Sum_probs=187.1
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEe-eeCCCe
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVC-RSKSDI 299 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~-~~~~~V 299 (513)
.+|.+.+|++.+..... .+..| ..+....|++++++|++|+. +.|++||+.+++....+ .|...|
T Consensus 76 ~d~~v~i~d~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v 142 (420)
T 3vl1_A 76 LDGHDFLFNTIIRDGSK------------MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEI 142 (420)
T ss_dssp ETTEEEEEECCSEETTT------------TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCE
T ss_pred cCCcEEEEEecccceee------------EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCcc
Confidence 36788888876443321 13334 45556678999999998865 55999999999888776 588899
Q ss_pred EEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCccccee
Q 037288 300 LAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSH 369 (513)
Q Consensus 300 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~ 369 (513)
.+++|+|++++|++|+.|+.|++||+++++. +..+.+|...|.+++|+| .+++++ |+...++.....
T Consensus 143 ~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 143 TKLKFFPSGEALISSSQDMQLKIWSVKDGSN---PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTF 219 (420)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCC---CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEeCCCCcC---ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEe
Confidence 9999999999999999999999999998876 447889999999999998 677776 888876543222
Q ss_pred Ee--ecCCCceEEE--------------------EEcCCCCEEEEEecCCeEEEEecCCCCccceEEe-cCCCCceeEEE
Q 037288 370 TT--FMPSSISCLQ--------------------SLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSY-EGHVNSHTRIQ 426 (513)
Q Consensus 370 ~~--~~~~~v~~~~--------------------~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~-~~h~~~v~~~~ 426 (513)
.. .+...+.++. .|+|++++|++|+.||.|++||++ ....+..+ .+|...+..
T Consensus 220 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~v~~-- 295 (420)
T 3vl1_A 220 NRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF--SKEQTIQLPSKFTCSCNS-- 295 (420)
T ss_dssp CBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT--TCCEEEEECCTTSSCEEE--
T ss_pred ecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC--CCceeEEcccccCCCcee--
Confidence 11 1233344433 357899999999999999999997 44545444 457888776
Q ss_pred EEEcCCCC-EEEEEeCCCcEEEEeCCCCeE-EEEecC-CCCCeEEEEEcCCCceEEeeCCCee
Q 037288 427 LGVDQSER-FVMSGGEDCKLRIWSIRSGEL-VFEDKF-SNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 427 ~~~s~~g~-~l~sg~~Dg~v~vwd~~~~~~-~~~~~~-~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
++|+|++. +|++|+.||.|++||+++++. +..+.. |..+++++.|+ ++.++++++.|-.
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d~~ 357 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGALFVSSGFDTS 357 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTEEEEEETTTEE
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCCEEEEecCCcc
Confidence 89999998 999999999999999998753 566554 67788888776 5567777766644
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.94 E-value=8.4e-25 Score=218.69 Aligned_cols=230 Identities=9% Similarity=0.035 Sum_probs=187.4
Q ss_pred eEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCc-------EEEEeeeCCCeEEEEEecC----C---cEEEE
Q 037288 249 MHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGM-------ASWVCRSKSDILAQQVIHS----G---NVVLC 313 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~-------~~~~~~~~~~V~~l~~~~~----~---~~l~s 313 (513)
...+.+|...|++++|+| .+|++|+ |+.|++||+.+++ ......|...|.+++|+|+ + ++|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 355789999999999998 6777775 5569999999887 5555568889999999999 9 99999
Q ss_pred EeCCCeEEEEECCCCcccc--cccccccc-----CcCeEEEeeC----C---e-EEEeE-------eeccc------Ccc
Q 037288 314 GFRNGAIVTVDVRKRQRGC--SSRAGRRH-----RIPYSRLQRN----D---R-VTNEQ-------WFELK------ANI 365 (513)
Q Consensus 314 g~~dg~i~iwd~~~~~~~~--~~~~~~~h-----~~~v~~v~~~----~---~-~~s~~-------w~~~~------~~~ 365 (513)
|+.||.|++||+....... .+..+..| ...|.+++|+ | . +++++ |+... +..
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 9999999999998776410 02356677 6999999999 7 5 77776 88877 443
Q ss_pred cc---eeEe--------ecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecC---C---CCceeEEEEE
Q 037288 366 WP---SHTT--------FMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEG---H---VNSHTRIQLG 428 (513)
Q Consensus 366 ~~---~~~~--------~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~---h---~~~v~~~~~~ 428 (513)
.. ...+ .+...+.++ .++|++ +|++++.||.|++||++ ...++..+.. | ...+.. ++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~-~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~h~~~~~~i~~--i~ 240 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSV-DISERG-LIATGFNNGTVQISELS--TLRPLYNFESQHSMINNSNSIRS--VK 240 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEE-EECTTS-EEEEECTTSEEEEEETT--TTEEEEEEECCC---CCCCCEEE--EE
T ss_pred eeccCcceeeeeeccccCCCCCceEE-EECCCc-eEEEEeCCCcEEEEECC--CCceeEEEeccccccccCCccce--EE
Confidence 32 1122 245667775 788899 99999999999999997 5558888888 8 888876 89
Q ss_pred EcCCCCEEEEEeCC---CcEEEEeCCCCeEEEEecC-------------CCCCeEEEEEcCCCceEEeeCCCee
Q 037288 429 VDQSERFVMSGGED---CKLRIWSIRSGELVFEDKF-------------SNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 429 ~s~~g~~l~sg~~D---g~v~vwd~~~~~~~~~~~~-------------~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
|+|++++|++++.| |.|++||+.+++++..+.. |...|.+++|+|++.++++++.+-.
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 314 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 314 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCe
Confidence 99999999999999 9999999999999999988 8999999999999888887776643
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.94 E-value=2.7e-24 Score=220.00 Aligned_cols=223 Identities=13% Similarity=0.208 Sum_probs=181.3
Q ss_pred EeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee-eCCCeEEEEEec--CCcEEEEEeCCCeEEEEECC
Q 037288 251 LVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR-SKSDILAQQVIH--SGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 251 ~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~--~~~~l~sg~~dg~i~iwd~~ 326 (513)
.+.+|...|++++|++++ ++++|+ |++|++||+.+++.+..+. |...|.+++|++ ++++|++|+.||.|++||++
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP 235 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECC
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCC
Confidence 366899999999999988 666665 5669999999999887776 888899999994 77999999999999999998
Q ss_pred CCccccc--------------------cccccccCcCeEEEeeCC-eEEEeE-------eecccCcccceeEee-cCCCc
Q 037288 327 KRQRGCS--------------------SRAGRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPSHTTF-MPSSI 377 (513)
Q Consensus 327 ~~~~~~~--------------------~~~~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~~~~~-~~~~v 377 (513)
....... +..+.+|...|.++..+. .+++++ |+...+... ..+. +...+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~v 313 (464)
T 3v7d_B 236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCL--YILSGHTDRI 313 (464)
T ss_dssp CCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEE--EEECCCSSCE
T ss_pred CCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE--EEecCCCCCE
Confidence 7754320 335778999999997776 677776 888766542 3333 45566
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 037288 378 SCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVF 457 (513)
Q Consensus 378 ~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~ 457 (513)
.++ .+++++++|++|+.||.|++||++ ...++.++.+|...+.. +.|+ +++|++|+.||.|++||+.+++...
T Consensus 314 ~~~-~~~~~~~~l~sg~~dg~i~vwd~~--~~~~~~~~~~h~~~v~~--~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 314 YST-IYDHERKRCISASMDTTIRIWDLE--NGELMYTLQGHTALVGL--LRLS--DKFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp EEE-EEETTTTEEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEE--EEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEE-EEcCCCCEEEEEeCCCcEEEEECC--CCcEEEEEeCCCCcEEE--EEEc--CCEEEEEeCCCcEEEEECCCCceee
Confidence 665 788999999999999999999997 55688999999999877 6666 6899999999999999999998777
Q ss_pred EecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 458 EDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 458 ~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
... +...+..++|+|++.++++++.+
T Consensus 387 ~~~-~~~~~~~~~~~~~~~~l~~~~dg 412 (464)
T 3v7d_B 387 SYH-HTNLSAITTFYVSDNILVSGSEN 412 (464)
T ss_dssp EEE-CTTCCCEEEEEECSSEEEEEETT
T ss_pred eec-CCCCccEEEEEeCCCEEEEecCC
Confidence 764 56678889999998777776644
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.1e-25 Score=241.58 Aligned_cols=259 Identities=9% Similarity=0.018 Sum_probs=177.3
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCcee-EEeccccCcEEEEEEcCC-CCEEEEEeCC-eEEEEECCCCcEEEEeee--
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTM-HLVASFKCTVWTADFCTN-PSQAVIGTNL-GAAMVDMETGMASWVCRS-- 295 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~~~~s~~-g~~l~s~s~~-~i~vwd~~~~~~~~~~~~-- 295 (513)
..+|.+.+|++.+.... .+.+...... ..+.+|...|++++|+|+ +..+++|+++ .| +||+.++++...+..
T Consensus 117 s~dg~V~lwd~~~~~~~--~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~ 193 (902)
T 2oaj_A 117 LQNGSMIVYDIDRDQLS--SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYEL 193 (902)
T ss_dssp ETTSCEEEEETTTTEEE--EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCB
T ss_pred cCCCcEEEEECCCCccc--cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEeccc
Confidence 45888999998754321 0000000000 225789999999999996 4677777654 58 999999988776653
Q ss_pred -----------------CCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccc---cc-------------cCc
Q 037288 296 -----------------KSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAG---RR-------------HRI 342 (513)
Q Consensus 296 -----------------~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~---~~-------------h~~ 342 (513)
...|.+++|+|+|.+|++|+.||+|++||+++++... .+.+ .. |..
T Consensus 194 ~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~-~r~l~~~~~~~~~~~~~~~~~~~~~ 272 (902)
T 2oaj_A 194 PPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM-ARTVFETEINVPQPDYIRDSSTNAA 272 (902)
T ss_dssp CTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE-EECSSCSCTTSCCTTCCCCCSSCCC
T ss_pred CCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE-EEeecccccCCCCCcCCCCCccccC
Confidence 3669999999999999999999999999999876533 1122 12 455
Q ss_pred CeEEEeeC----C----eEEEeE------------eecc------------------------------cCcc-------
Q 037288 343 PYSRLQRN----D----RVTNEQ------------WFEL------------------------------KANI------- 365 (513)
Q Consensus 343 ~v~~v~~~----~----~~~s~~------------w~~~------------------------------~~~~------- 365 (513)
+|.+++|+ | .+++++ |+.. .+..
T Consensus 273 ~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 352 (902)
T 2oaj_A 273 KISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIP 352 (902)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECC
T ss_pred CeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECC
Confidence 79999993 3 355553 2210 0000
Q ss_pred ----------cc-----------eeEee-------------------cCCCceEE-------------------------
Q 037288 366 ----------WP-----------SHTTF-------------------MPSSISCL------------------------- 380 (513)
Q Consensus 366 ----------~~-----------~~~~~-------------------~~~~v~~~------------------------- 380 (513)
.+ ...+. +...+.++
T Consensus 353 ~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~ 432 (902)
T 2oaj_A 353 RQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLK 432 (902)
T ss_dssp SSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCC
T ss_pred CCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCccc
Confidence 00 00000 00112222
Q ss_pred --------EEEcCCCCEEEEEecCCeEEEEecCCCCcc--ceEE--ec-----CCCCceeEEEEEEcCCCCEEEEEeCCC
Q 037288 381 --------QSLQLYDQYFLASSMDGTVKLYDHRLTTRG--AVQS--YE-----GHVNSHTRIQLGVDQSERFVMSGGEDC 443 (513)
Q Consensus 381 --------~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~--~~~~--~~-----~h~~~v~~~~~~~s~~g~~l~sg~~Dg 443 (513)
+.++|++++|++|+.|++|++||+...... .... +. +|...|.. ++|+|++++||+|+.||
T Consensus 433 G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~s--vafspdg~~LAsgs~Dg 510 (902)
T 2oaj_A 433 GGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDK--ISFAAETLELAVSIETG 510 (902)
T ss_dssp CSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEE--EEEETTTTEEEEEETTS
T ss_pred CCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeE--EEecCCCCeEEEEecCc
Confidence 124678999999999999999999632111 1111 11 78888877 99999999999999999
Q ss_pred cEEEEeCCCC---------------------------------------------eEEEEecCCCCCeEEEEEcCCCceE
Q 037288 444 KLRIWSIRSG---------------------------------------------ELVFEDKFSNSVPSAVCWRTQRSMG 478 (513)
Q Consensus 444 ~v~vwd~~~~---------------------------------------------~~~~~~~~~~~~v~~v~~~p~~~~~ 478 (513)
+|+|||+.++ +++..+..|.+.|++++|+|++ ++
T Consensus 511 tV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~l 589 (902)
T 2oaj_A 511 DVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FV 589 (902)
T ss_dssp CEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EE
T ss_pred EEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EE
Confidence 9999999876 3467788899999999999999 88
Q ss_pred EeeCCCee
Q 037288 479 PQIEGKIH 486 (513)
Q Consensus 479 ~t~~~~~~ 486 (513)
|+++.|-.
T Consensus 590 Asgs~D~t 597 (902)
T 2oaj_A 590 GIAYAAGS 597 (902)
T ss_dssp EEEETTSE
T ss_pred EEEeCCCc
Confidence 88776654
No 79
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.2e-25 Score=214.91 Aligned_cols=178 Identities=11% Similarity=0.074 Sum_probs=134.7
Q ss_pred ccccCcEEEEEEcC--CCCEEEEEe-CCeEEEEECCCCcEEEEee--eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCC
Q 037288 253 ASFKCTVWTADFCT--NPSQAVIGT-NLGAAMVDMETGMASWVCR--SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRK 327 (513)
Q Consensus 253 ~~h~~~V~~~~~s~--~g~~l~s~s-~~~i~vwd~~~~~~~~~~~--~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 327 (513)
.+|...|.+++|+| ++.++++|+ |+.|++||+.+++...... +...|.+++|+|++.+|++|+.||.|++||+++
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 36778999999999 999999886 4569999999999876653 455799999999999999999999999999998
Q ss_pred Cccccccccccc-cCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCC
Q 037288 328 RQRGCSSRAGRR-HRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRL 406 (513)
Q Consensus 328 ~~~~~~~~~~~~-h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~ 406 (513)
++.. ...+.. |..+|.++ .|+|++.+|++++ |+.|++||++
T Consensus 202 ~~~~--~~~~~~~h~~~v~~l----------------------------------~fs~~g~~l~s~~-~~~v~iwd~~- 243 (343)
T 3lrv_A 202 PDQA--SSRFPVDEEAKIKEV----------------------------------KFADNGYWMVVEC-DQTVVCFDLR- 243 (343)
T ss_dssp TTSC--CEECCCCTTSCEEEE----------------------------------EECTTSSEEEEEE-SSBEEEEETT-
T ss_pred CCCC--ccEEeccCCCCEEEE----------------------------------EEeCCCCEEEEEe-CCeEEEEEcC-
Confidence 8753 135666 88888885 4566999999999 5599999998
Q ss_pred CCccceEEec---CCCCceeEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcC
Q 037288 407 TTRGAVQSYE---GHVNSHTRIQLGVDQSERFVMSGGE-DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRT 473 (513)
Q Consensus 407 ~~~~~~~~~~---~h~~~v~~~~~~~s~~g~~l~sg~~-Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p 473 (513)
....+..+. .|...+...+++|+|+|++|++++. |+.|++|++......... .++..++|++
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~ 309 (343)
T 3lrv_A 244 -KDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQS 309 (343)
T ss_dssp -SSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC--
T ss_pred -CCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCc
Confidence 444433333 3444333234899999999999998 999999999765433332 4566777777
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=1.6e-24 Score=237.33 Aligned_cols=228 Identities=11% Similarity=0.070 Sum_probs=192.4
Q ss_pred eEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 249 MHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
...+.+|.+.|.+++|+|++.+|++|+. +.|++||+.+++.+..+. |...|.+++|+|++++|++|+.||.|++||+.
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 4568899999999999999999998865 569999999998877766 88889999999999999999999999999999
Q ss_pred CCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEec
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSM 395 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~ 395 (513)
+++. +..+.+|...|.+++|+| .+++++ |+...+.........+...+.++ .|+| +++.|++++.
T Consensus 86 ~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~l~~~~~ 161 (814)
T 3mkq_A 86 TGEK---VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV-AFNPKDPSTFASGCL 161 (814)
T ss_dssp TCCE---EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEE-EEETTEEEEEEEEET
T ss_pred CCcE---EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEE-EEEcCCCCEEEEEeC
Confidence 8876 447889999999999999 577766 88876633222333456667776 6777 8899999999
Q ss_pred CCeEEEEecCCCCccceEEecCCC-CceeEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEc
Q 037288 396 DGTVKLYDHRLTTRGAVQSYEGHV-NSHTRIQLGVDQ--SERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWR 472 (513)
Q Consensus 396 dg~i~lwd~~~~~~~~~~~~~~h~-~~v~~~~~~~s~--~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~ 472 (513)
||.|++||++ .......+..|. ..+.. ++|+| ++.+|++|+.||.|++||+.+++.+..+..|...|++++|+
T Consensus 162 dg~v~vwd~~--~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 237 (814)
T 3mkq_A 162 DRTVKVWSLG--QSTPNFTLTTGQERGVNY--VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (814)
T ss_dssp TSEEEEEETT--CSSCSEEEECCCTTCCCE--EEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred CCeEEEEECC--CCcceeEEecCCCCCEEE--EEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 9999999997 444555665544 77777 78888 99999999999999999999999999999999999999999
Q ss_pred CCCceEEeeCCC
Q 037288 473 TQRSMGPQIEGK 484 (513)
Q Consensus 473 p~~~~~~t~~~~ 484 (513)
|++.++++++.+
T Consensus 238 ~~~~~l~~~~~d 249 (814)
T 3mkq_A 238 PTLPIIISGSED 249 (814)
T ss_dssp SSSSEEEEEETT
T ss_pred CCCCEEEEEeCC
Confidence 998777777654
No 81
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=1.1e-25 Score=223.09 Aligned_cols=183 Identities=9% Similarity=0.111 Sum_probs=146.0
Q ss_pred cCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEe---eeC
Q 037288 220 ETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVC---RSK 296 (513)
Q Consensus 220 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~---~~~ 296 (513)
+..++.+.+|++.+... +..+ .|...|++++|+|+|+++++++++++++|+..++...... .|.
T Consensus 153 ~~~d~~i~iwd~~~~~~------------~~~~-~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~ 219 (365)
T 4h5i_A 153 SKVPAIMRIIDPSDLTE------------KFEI-ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKN 219 (365)
T ss_dssp SCSSCEEEEEETTTTEE------------EEEE-ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTT
T ss_pred CCCCCEEEEeECCCCcE------------EEEe-CCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCC
Confidence 34577888888764322 2333 4778999999999999999999999999998888765432 256
Q ss_pred CCeEEEEEecCCcEEEEEeCCC----eEEEEECCCCcccc-ccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEe
Q 037288 297 SDILAQQVIHSGNVVLCGFRNG----AIVTVDVRKRQRGC-SSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTT 371 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg----~i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~ 371 (513)
..|.+++|+|++..+++++.|+ .+++||+....... ....+.+|..+|+++
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~------------------------ 275 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSM------------------------ 275 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEE------------------------
T ss_pred CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeE------------------------
Confidence 6799999999999999999887 68889987664322 023455666666663
Q ss_pred ecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEe-cCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 037288 372 FMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSY-EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSI 450 (513)
Q Consensus 372 ~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~-~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~ 450 (513)
.|+|+|++||+|+.|+.|+|||++ ...++.++ .+|...|++ ++|+|||++|++||.|++|+|||+
T Consensus 276 ----------~~Spdg~~lasgs~D~~V~iwd~~--~~~~~~~~~~gH~~~V~~--v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 276 ----------DVDMKGELAVLASNDNSIALVKLK--DLSMSKIFKQAHSFAITE--VTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp ----------EECTTSCEEEEEETTSCEEEEETT--TTEEEEEETTSSSSCEEE--EEECTTSCEEEEEETTSEEEEEEC
T ss_pred ----------EECCCCCceEEEcCCCEEEEEECC--CCcEEEEecCcccCCEEE--EEECCCCCEEEEEeCCCeEEEEEc
Confidence 567799999999999999999997 55577775 799999987 999999999999999999999999
Q ss_pred CCC
Q 037288 451 RSG 453 (513)
Q Consensus 451 ~~~ 453 (513)
...
T Consensus 342 p~~ 344 (365)
T 4h5i_A 342 PLN 344 (365)
T ss_dssp CTT
T ss_pred CCC
Confidence 643
No 82
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=2.5e-25 Score=223.50 Aligned_cols=249 Identities=13% Similarity=0.106 Sum_probs=189.1
Q ss_pred cCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcC-CCCEEEEEeC-CeEEEEECCCC-------cEE
Q 037288 220 ETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT-NPSQAVIGTN-LGAAMVDMETG-------MAS 290 (513)
Q Consensus 220 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~-~g~~l~s~s~-~~i~vwd~~~~-------~~~ 290 (513)
+..+|.+.+|++....... ..+..+.+|...|.+++|+| ++.+|++|+. +.|++||+.++ +.+
T Consensus 53 ~~~~g~i~v~~~~~~~~~~--------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~ 124 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVD--------KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPV 124 (402)
T ss_dssp CSSSCCEEEEETTCCEECC--------TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCS
T ss_pred EcCCCEEEEEECccCCCCC--------CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCce
Confidence 4467889999886432211 11334789999999999999 9999999875 55999999987 334
Q ss_pred EEe-eeCCCeEEEEEecCC-cEEEEEeCCCeEEEEECCCCccccccccc--cccCcCeEEEeeCC---eEEEeE------
Q 037288 291 WVC-RSKSDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGCSSRAG--RRHRIPYSRLQRND---RVTNEQ------ 357 (513)
Q Consensus 291 ~~~-~~~~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~~~---~~~s~~------ 357 (513)
..+ .|...|.+++|+|++ ++|++|+.||.|++||+++++.. ..+ .+|...|.+++|+| .+++++
T Consensus 125 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 201 (402)
T 2aq5_A 125 ITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV---LTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVR 201 (402)
T ss_dssp EEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE---EEECTTTCCSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc---EEEecCCCCCceEEEEECCCCCEEEEEecCCcEE
Confidence 444 488899999999998 79999999999999999988753 366 78999999999998 677776
Q ss_pred -eecccCcccceeEeecCCC-ceEEEEEcCCCCEEEEE---ecCCeEEEEecCCCCcc-ceEEec-CCCCceeEEEEEEc
Q 037288 358 -WFELKANIWPSHTTFMPSS-ISCLQSLQLYDQYFLAS---SMDGTVKLYDHRLTTRG-AVQSYE-GHVNSHTRIQLGVD 430 (513)
Q Consensus 358 -w~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~s~---s~dg~i~lwd~~~~~~~-~~~~~~-~h~~~v~~~~~~~s 430 (513)
|+...+.........+... +.+ +.+++++++|++| +.|+.|++||++ ... ++.... .|...+.. ++|+
T Consensus 202 iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~~--~~~s 276 (402)
T 2aq5_A 202 VIEPRKGTVVAEKDRPHEGTRPVH-AVFVSEGKILTTGFSRMSERQVALWDTK--HLEEPLSLQELDTSSGVLL--PFFD 276 (402)
T ss_dssp EEETTTTEEEEEEECSSCSSSCCE-EEECSTTEEEEEEECTTCCEEEEEEETT--BCSSCSEEEECCCCSSCEE--EEEE
T ss_pred EEeCCCCceeeeeccCCCCCcceE-EEEcCCCcEEEEeccCCCCceEEEEcCc--cccCCceEEeccCCCceeE--EEEc
Confidence 9988776432221233343 455 4788999999999 789999999997 333 233332 46666655 8999
Q ss_pred CCCCEEE-EEeCCCcEEEEeCCCCeE-EEEecC--CCCCeEEEEEcCCCceEEeeCCC
Q 037288 431 QSERFVM-SGGEDCKLRIWSIRSGEL-VFEDKF--SNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 431 ~~g~~l~-sg~~Dg~v~vwd~~~~~~-~~~~~~--~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
|++++|+ +|+.||.|++||+.+++. +..+.. +..+|.+++|+|++.++++.+..
T Consensus 277 ~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~ 334 (402)
T 2aq5_A 277 PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEI 334 (402)
T ss_dssp TTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEE
T ss_pred CCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceeccee
Confidence 9999986 455799999999999873 444332 46889999999998887765553
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=8.5e-24 Score=213.66 Aligned_cols=245 Identities=11% Similarity=0.095 Sum_probs=193.5
Q ss_pred CccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeE
Q 037288 223 GGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDIL 300 (513)
Q Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~ 300 (513)
++.+.+|+..+.... .+..+.+|...|++++|+|+|++|++|+. +.|+|||+.+++.+..+. |...|.
T Consensus 124 d~tV~lWd~~tg~~~----------~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~ 193 (420)
T 4gga_A 124 DNSVYLWSASSGDIL----------QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG 193 (420)
T ss_dssp TTEEEEEETTTCCEE----------EEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCEEEEEECCCCCEE----------EEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE
Confidence 678889988754332 23446688899999999999999999865 459999999999877766 777798
Q ss_pred EEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCccc--ce
Q 037288 301 AQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIW--PS 368 (513)
Q Consensus 301 ~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~--~~ 368 (513)
+++++ +.+|++|+.|+.+++||.+..... +..+.+|...+..+.+.+ .+++++ |+...++.. ..
T Consensus 194 ~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~--~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~ 269 (420)
T 4gga_A 194 SLSWN--SYILSSGSRSGHIHHHDVRVAEHH--VATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPL 269 (420)
T ss_dssp EEEEE--TTEEEEEETTSEEEEEETTSSSCE--EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCS
T ss_pred EEeeC--CCEEEEEeCCCceeEeeeccccee--eEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceee
Confidence 88774 789999999999999999876532 567899999999999998 566665 887765432 12
Q ss_pred -eEeecCCCceEEEEEcCCCCEEEEE--ecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEe--CCC
Q 037288 369 -HTTFMPSSISCLQSLQLYDQYFLAS--SMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGG--EDC 443 (513)
Q Consensus 369 -~~~~~~~~v~~~~~~~~~~~~l~s~--s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~--~Dg 443 (513)
....+...|.++.+.+.+..+++++ +.|++|++||++ ...++..+..|.. +.. +.|+++++.|++++ .|+
T Consensus 270 ~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~--t~~~~~~~~~~~~-v~~--~~~~~~~~~lv~~sg~~d~ 344 (420)
T 4gga_A 270 QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC--SGACLSAVDAHSQ-VCS--ILWSPHYKELISGHGFAQN 344 (420)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT--TTEEEEEEECSSC-EEE--EEEETTTTEEEEEECTTTC
T ss_pred eeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC--ccccceeeccccc-eee--eeecCCCCeEEEEEecCCC
Confidence 2334456677765544456666654 479999999997 5557777776553 444 78999999988765 799
Q ss_pred cEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 444 KLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 444 ~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
.|+|||+.+++++.++.+|.+.|++++|+|++.+++|++.|-.
T Consensus 345 ~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 345 QLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 9999999999999999999999999999999999999887754
No 84
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=4.3e-24 Score=208.42 Aligned_cols=227 Identities=11% Similarity=0.069 Sum_probs=173.1
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcC--CCCEEEEEeC-CeEEEEECCCC---------cE
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT--NPSQAVIGTN-LGAAMVDMETG---------MA 289 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~--~g~~l~s~s~-~~i~vwd~~~~---------~~ 289 (513)
.+|.+.+|++.+..... .....+.+|...|.+++|+| ++.+|++|+. +.|++||+.++ +.
T Consensus 31 ~dg~i~iw~~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 102 (351)
T 3f3f_A 31 SDQHIKVFKLDKDTSNW--------ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNK 102 (351)
T ss_dssp TTSEEEEEEECSSSCCE--------EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEE
T ss_pred CCCeEEEEECCCCCCcc--------eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcce
Confidence 57889999887433221 13456789999999999999 6899998865 55999999886 33
Q ss_pred EEEe-eeCCCeEEEEEecC--CcEEEEEeCCCeEEEEECCCCccccccc----------cccccCcCeEEEeeCC-----
Q 037288 290 SWVC-RSKSDILAQQVIHS--GNVVLCGFRNGAIVTVDVRKRQRGCSSR----------AGRRHRIPYSRLQRND----- 351 (513)
Q Consensus 290 ~~~~-~~~~~V~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~----------~~~~h~~~v~~v~~~~----- 351 (513)
...+ .|...|.+++|+|+ +++|++|+.||.|++||+++.+....+. ....|...+.+++|+|
T Consensus 103 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 182 (351)
T 3f3f_A 103 LCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP 182 (351)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSC
T ss_pred eeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCC
Confidence 4444 47888999999999 9999999999999999998876533110 1126888999999986
Q ss_pred -eEEEeE-------eecccCcccceeEee-cCCCceEEEEEcCCC----CEEEEEecCCeEEEEecCCCC----------
Q 037288 352 -RVTNEQ-------WFELKANIWPSHTTF-MPSSISCLQSLQLYD----QYFLASSMDGTVKLYDHRLTT---------- 408 (513)
Q Consensus 352 -~~~s~~-------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~----~~l~s~s~dg~i~lwd~~~~~---------- 408 (513)
.+++++ |+...+.......+. +...+.++ .++|++ ++|++++.||.|++||++...
T Consensus 183 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~-~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 261 (351)
T 3f3f_A 183 EKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSI-SWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLT 261 (351)
T ss_dssp CEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEE-EECCCSSCSSEEEEEEETTSCEEEEEEEECC----------
T ss_pred cEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEE-EECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCccc
Confidence 466655 444444433333443 45566665 788887 899999999999999997310
Q ss_pred ----------------------------------ccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe
Q 037288 409 ----------------------------------RGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGE 454 (513)
Q Consensus 409 ----------------------------------~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~ 454 (513)
...+..+.+|...|+. ++|+|++++|++|+.||.|++||+.+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~--~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 262 NSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWS--VSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp -----------------------------CCSEEEEEEEEECTTSSCEEE--EEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred ceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEE--EEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 1366778899999877 8999999999999999999999999886
Q ss_pred EEEEe
Q 037288 455 LVFED 459 (513)
Q Consensus 455 ~~~~~ 459 (513)
.+..+
T Consensus 340 ~~~~~ 344 (351)
T 3f3f_A 340 EFKCM 344 (351)
T ss_dssp CEEEE
T ss_pred chhhe
Confidence 55443
No 85
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=1.9e-25 Score=216.84 Aligned_cols=189 Identities=10% Similarity=0.013 Sum_probs=142.9
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCC--CCEEEEEe-CCeEEEEECCCCcEE---EEe-
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTN--PSQAVIGT-NLGAAMVDMETGMAS---WVC- 293 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~--g~~l~s~s-~~~i~vwd~~~~~~~---~~~- 293 (513)
..++.+.+|++.+... .....+.+|...|++++|+|+ +.+|++|+ |+.|++||+.++... ..+
T Consensus 78 s~D~~v~iWd~~~~~~----------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~ 147 (316)
T 3bg1_A 78 SYDRKVIIWREENGTW----------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINN 147 (316)
T ss_dssp ETTSCEEEECCSSSCC----------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT
T ss_pred ECCCEEEEEECCCCcc----------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec
Confidence 3578888888764221 134567899999999999997 78898886 456999999876422 112
Q ss_pred eeCCCeEEEEEecC-----------------CcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEe
Q 037288 294 RSKSDILAQQVIHS-----------------GNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNE 356 (513)
Q Consensus 294 ~~~~~V~~l~~~~~-----------------~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~ 356 (513)
.|...|.+++|+|+ +.+|++|+.|++|++||++.......+..+.+|..+|.+++|+|
T Consensus 148 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp----- 222 (316)
T 3bg1_A 148 AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP----- 222 (316)
T ss_dssp SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC-----
T ss_pred cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC-----
Confidence 37778999999997 46899999999999999975532111557889999999977654
Q ss_pred EeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCcc--ceEEecCCCCceeEEEEEEcCCCC
Q 037288 357 QWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRG--AVQSYEGHVNSHTRIQLGVDQSER 434 (513)
Q Consensus 357 ~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~--~~~~~~~h~~~v~~~~~~~s~~g~ 434 (513)
....++++|++++.|++|++||++..... ....+.+|...+.. ++|+|+++
T Consensus 223 -------------------------~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~--v~~sp~g~ 275 (316)
T 3bg1_A 223 -------------------------SIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWH--VSWSITAN 275 (316)
T ss_dssp -------------------------CSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEE--EEECTTTC
T ss_pred -------------------------CCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEE--EEEcCCCC
Confidence 00012378999999999999998731111 23455678888766 89999999
Q ss_pred EEEEEeCCCcEEEEeCC
Q 037288 435 FVMSGGEDCKLRIWSIR 451 (513)
Q Consensus 435 ~l~sg~~Dg~v~vwd~~ 451 (513)
+|++|+.||+|+||+..
T Consensus 276 ~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 276 ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CEEEEESSSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEEEC
Confidence 99999999999999976
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=2.1e-24 Score=218.17 Aligned_cols=222 Identities=10% Similarity=0.097 Sum_probs=171.5
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCC-eEEEEECCCCc-EEEEe-eeCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNL-GAAMVDMETGM-ASWVC-RSKS 297 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~-~i~vwd~~~~~-~~~~~-~~~~ 297 (513)
..+|.+.+|++.+. ..+..+.+|...|.++++ ++.++++|+.+ .+++||..... .+..+ .|..
T Consensus 166 s~Dg~v~iWd~~~~------------~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~ 231 (420)
T 4gga_A 166 TSSAEVQLWDVQQQ------------KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ 231 (420)
T ss_dssp ETTSCEEEEETTTT------------EEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS
T ss_pred ECCCeEEEEEcCCC------------cEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEeccccc
Confidence 35788888887643 235668899999999887 46788888655 59999988654 33333 4888
Q ss_pred CeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccc-ccccccccCcCeEEEeeCC----eEEEeE---------eecccC
Q 037288 298 DILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGC-SSRAGRRHRIPYSRLQRND----RVTNEQ---------WFELKA 363 (513)
Q Consensus 298 ~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~~----~~~s~~---------w~~~~~ 363 (513)
.+..+.|+|++.++++++.|+.|++||...++... .+.....|...|.+++|+| .+++++ |+...+
T Consensus 232 ~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 232 EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT
T ss_pred ceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc
Confidence 89999999999999999999999999998765422 1456788999999999998 333332 888877
Q ss_pred cccceeEeecCCCceEEEEEcCCCCEEEEEe--cCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeC
Q 037288 364 NIWPSHTTFMPSSISCLQSLQLYDQYFLASS--MDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE 441 (513)
Q Consensus 364 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s--~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~ 441 (513)
.. ...+.....+.++ .++++++.+++++ .|+.|++||++ ...++.++.+|.+.|.+ ++|+|+|++|+||+.
T Consensus 312 ~~--~~~~~~~~~v~~~-~~~~~~~~lv~~sg~~d~~I~iwd~~--~~~~v~~l~gH~~~V~~--l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 312 AC--LSAVDAHSQVCSI-LWSPHYKELISGHGFAQNQLVIWKYP--TMAKVAELKGHTSRVLS--LTMSPDGATVASAAA 384 (420)
T ss_dssp EE--EEEEECSSCEEEE-EEETTTTEEEEEECTTTCCEEEEETT--TCCEEEEECCCSSCEEE--EEECTTSSCEEEEET
T ss_pred cc--ceeeccccceeee-eecCCCCeEEEEEecCCCEEEEEECC--CCcEEEEEcCCCCCEEE--EEEcCCCCEEEEEec
Confidence 64 3455566677776 5677888888765 68999999997 56689999999999877 899999999999999
Q ss_pred CCcEEEEeCCCCeEEEEecCCC
Q 037288 442 DCKLRIWSIRSGELVFEDKFSN 463 (513)
Q Consensus 442 Dg~v~vwd~~~~~~~~~~~~~~ 463 (513)
|++|+|||+.+..+......+.
T Consensus 385 D~tvriWdv~~~~~~~~~~~~~ 406 (420)
T 4gga_A 385 DETLRLWRCFELDPARRREREK 406 (420)
T ss_dssp TTEEEEECCSCSSCC-------
T ss_pred CCeEEEEECCCCCccchhhhcc
Confidence 9999999998876665544443
No 87
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=5.2e-25 Score=220.57 Aligned_cols=245 Identities=10% Similarity=-0.021 Sum_probs=161.6
Q ss_pred cCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcC--------CCCEEEEEeCC-eEEEEECCCCcE-
Q 037288 220 ETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT--------NPSQAVIGTNL-GAAMVDMETGMA- 289 (513)
Q Consensus 220 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~--------~g~~l~s~s~~-~i~vwd~~~~~~- 289 (513)
+..++.+.+|++...... ....+..+.+|.+.|++++|+| ++++||+|+++ +|+|||+.++.+
T Consensus 107 ~~~d~~v~lw~~~~~~~~-------~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 107 VCQDNTVRLIITKNETII-------TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EETTSCEEEEEEETTEEE-------EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred EeCCCcEEEEECCCCccc-------eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 446788888887643221 1112334789999999999998 78999998755 599999987764
Q ss_pred EEEeeeCCCeEEEEEecCC-cEEEEEeCCCeEEEEECCCCccccccc-cccccCcCeEEEeeCCeEEEeEeecccCcccc
Q 037288 290 SWVCRSKSDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGCSSR-AGRRHRIPYSRLQRNDRVTNEQWFELKANIWP 367 (513)
Q Consensus 290 ~~~~~~~~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~ 367 (513)
.....|.+.|.+++|+|++ ++|++|+.|++|++||+++++...... ....+...+....+.+ ....
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~------------~~~~ 247 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP------------LVNT 247 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG------------GC--
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc------------ceee
Confidence 4556689999999999987 589999999999999999876533111 1112222223322211 0000
Q ss_pred eeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEE----------------EEEEcC
Q 037288 368 SHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRI----------------QLGVDQ 431 (513)
Q Consensus 368 ~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~----------------~~~~s~ 431 (513)
.....+...+.++.+..++++.|++++.|+.+++||+. .......+..|...+... ...++|
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF--ANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc--cCCCCceEeeecCccccEEEccccccccccCcceeEEEcc
Confidence 11123456777877788999999999999999999997 333344444443332220 123333
Q ss_pred --CCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCCe
Q 037288 432 --SERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 432 --~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
++.++++|+.||.|++||+.+++++..+..|..+|++++|+|++.++|++..+-
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 345678889999999999999998888888889999999999988877776553
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.94 E-value=2.7e-25 Score=220.91 Aligned_cols=214 Identities=8% Similarity=-0.034 Sum_probs=156.0
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCc----EEEEeeeC
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGM----ASWVCRSK 296 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~----~~~~~~~~ 296 (513)
.+|.+.+|++.+... ..+..+.+|...|.+++|+|++++|++++. +.|++||+.++. ......|.
T Consensus 31 ~d~~i~iw~~~~~~~----------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~ 100 (377)
T 3dwl_C 31 ATNQVELYEQDGNGW----------KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN 100 (377)
T ss_dssp SSSCBCEEEEETTEE----------EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCS
T ss_pred CCCEEEEEEccCCce----------EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC
Confidence 467777777663310 123457899999999999999999998875 569999999876 34444588
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccc-cCcCeEEEeeCC---eEEEeE-------eecccCcc
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRR-HRIPYSRLQRND---RVTNEQ-------WFELKANI 365 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~~~---~~~s~~-------w~~~~~~~ 365 (513)
..|.+++|+|++++|++|+.|+.|++||++..+.......+.+ |...|.+++|+| .+++++ |+......
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 180 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDV 180 (377)
T ss_dssp SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSC
T ss_pred CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEeccc
Confidence 8999999999999999999999999999998763221446677 999999999998 677776 88753221
Q ss_pred ----------------cceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccc----eEEecCCCCceeEE
Q 037288 366 ----------------WPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGA----VQSYEGHVNSHTRI 425 (513)
Q Consensus 366 ----------------~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~----~~~~~~h~~~v~~~ 425 (513)
.....+.+...+.++ .|+|++++|++++.||.|++||++ .... +..+.+|...+..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~v~~- 256 (377)
T 3dwl_C 181 DAKPEASVWGSRLPFNTVCAEYPSGGWVHAV-GFSPSGNALAYAGHDSSVTIAYPS--APEQPPRALITVKLSQLPLRS- 256 (377)
T ss_dssp C-CCCSCSSCSCCCEEEEEECCCCSSSEEEE-EECTTSSCEEEEETTTEEC-CEEC--STTSCEEECCCEECSSSCEEE-
T ss_pred CCCccccccccccchhhhhhcccCCceEEEE-EECCCCCEEEEEeCCCcEEEEECC--CCCCcceeeEeecCCCCceEE-
Confidence 111222455566665 789999999999999999999997 4444 7788899998877
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCC
Q 037288 426 QLGVDQSERFVMSGGEDCKLRIWSIR 451 (513)
Q Consensus 426 ~~~~s~~g~~l~sg~~Dg~v~vwd~~ 451 (513)
++|+|++++|++|+.|+.+ +|+..
T Consensus 257 -~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 257 -LLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp -EEEEETTEEEEEESSSSEE-EECCC
T ss_pred -EEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 8899999999998866655 66654
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=3.5e-24 Score=210.58 Aligned_cols=228 Identities=12% Similarity=0.104 Sum_probs=178.5
Q ss_pred EEeccccCcEEEEEEcCCCCEEE-EEe----CCeEEEEECCCCcEEE--EeeeCCCeEEEEEecC---CcEEEEEeCCCe
Q 037288 250 HLVASFKCTVWTADFCTNPSQAV-IGT----NLGAAMVDMETGMASW--VCRSKSDILAQQVIHS---GNVVLCGFRNGA 319 (513)
Q Consensus 250 ~~~~~h~~~V~~~~~s~~g~~l~-s~s----~~~i~vwd~~~~~~~~--~~~~~~~V~~l~~~~~---~~~l~sg~~dg~ 319 (513)
..+.+|...|.+++|+|++..++ +|+ |+.|++||+.+++... ...|...|.+++|+|+ +.+|++|+.||.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 44678999999999999996554 554 5669999999987643 3468889999999998 699999999999
Q ss_pred EEEEECCCCc-cccccccccccCcCeEEEee------CC---eEEEeE-------eecccCcccceeEee-c----CCCc
Q 037288 320 IVTVDVRKRQ-RGCSSRAGRRHRIPYSRLQR------ND---RVTNEQ-------WFELKANIWPSHTTF-M----PSSI 377 (513)
Q Consensus 320 i~iwd~~~~~-~~~~~~~~~~h~~~v~~v~~------~~---~~~s~~-------w~~~~~~~~~~~~~~-~----~~~v 377 (513)
|++||+...+ . +..+.+|...|.+++| ++ .+++++ |+...+... ...+. + ...+
T Consensus 92 i~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 92 LHIWNLEAPEMP---VYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDP-VANMEPVQGENKRDC 167 (357)
T ss_dssp EEEECTTSCSSC---SEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSC-SEEECCCTTSCCCCE
T ss_pred EEEEeCCCCCcc---EEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCc-ceeccccCCCCCCce
Confidence 9999999876 3 4578899999999955 45 677776 888776522 22222 1 2256
Q ss_pred eEEEE---EcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcC---CCCEEEEEeCCCcEEEEeCC
Q 037288 378 SCLQS---LQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQ---SERFVMSGGEDCKLRIWSIR 451 (513)
Q Consensus 378 ~~~~~---~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~---~g~~l~sg~~Dg~v~vwd~~ 451 (513)
.++.+ +++++++|++++.||.|++||++ .... .....|...+.. ++|+| ++.+|++|+.||.|++||++
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~-~~~~~~~~~v~~--~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCAGYDNGDIKLFDLR--NMAL-RWETNIKNGVCS--LEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp EEEEEECCCC-CCCEEEEEETTSEEEEEETT--TTEE-EEEEECSSCEEE--EEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred EEEEEEeccCCCCCEEEEEccCCeEEEEECc--cCce-eeecCCCCceEE--EEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 66643 77999999999999999999997 3333 344568888776 89999 99999999999999999998
Q ss_pred CCeEEEEec-----CCCCCeEEEEEcCCCc-eEEeeCCCee
Q 037288 452 SGELVFEDK-----FSNSVPSAVCWRTQRS-MGPQIEGKIH 486 (513)
Q Consensus 452 ~~~~~~~~~-----~~~~~v~~v~~~p~~~-~~~t~~~~~~ 486 (513)
+++.+..+. .|...|++++|+|++. ++++++.|-.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 243 TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG 283 (357)
T ss_dssp EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc
Confidence 877554443 8899999999999966 7777766533
No 90
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=3.8e-24 Score=211.26 Aligned_cols=224 Identities=12% Similarity=0.059 Sum_probs=171.0
Q ss_pred eEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEE-EEEeCCCeEEEEECCC
Q 037288 249 MHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVV-LCGFRNGAIVTVDVRK 327 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l-~sg~~dg~i~iwd~~~ 327 (513)
+..+.+|...|++++|+|||++|++|+++++++||+.+++......+ ..+..+++.++++.+ ++|+.|++|++||+.+
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM-RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC-SCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec-CCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 44568899999999999999999999999999999998776554443 358888899888766 6778889999999998
Q ss_pred CccccccccccccCcCeEEEeeCC-eEEEeE------eecccC-cccceeEeecCCCceEEEEEcCCCCEEEE--EecCC
Q 037288 328 RQRGCSSRAGRRHRIPYSRLQRND-RVTNEQ------WFELKA-NIWPSHTTFMPSSISCLQSLQLYDQYFLA--SSMDG 397 (513)
Q Consensus 328 ~~~~~~~~~~~~h~~~v~~v~~~~-~~~s~~------w~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s--~s~dg 397 (513)
++... .+. |..+|.++.+++ .++.+. |+.... +.... +.. ...+..+++ .++++ |+.||
T Consensus 91 ~~~~~---~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~--~~~---~~~~~~~s~--~~la~~sg~~~g 159 (355)
T 3vu4_A 91 KQDVS---RIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITD--DIR---FGGVCEFSN--GLLVYSNEFNLG 159 (355)
T ss_dssp TEEEE---EEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSC--CEE---EEEEEEEET--TEEEEEESSCTT
T ss_pred CcEEE---EEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEE--ecc---CCceEEEEc--cEEEEeCCCcCc
Confidence 87643 443 667999999999 444333 887765 33221 111 233445665 66666 57899
Q ss_pred eEEEEecCCCC------c-------cc-eEEecCCCCceeEEEEEEcCCCCEEEEEeCCCc-EEEEeCCCCeEEEEec-C
Q 037288 398 TVKLYDHRLTT------R-------GA-VQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCK-LRIWSIRSGELVFEDK-F 461 (513)
Q Consensus 398 ~i~lwd~~~~~------~-------~~-~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~-v~vwd~~~~~~~~~~~-~ 461 (513)
.|++||++... . .+ +..+.+|...|.+ ++|+|+|++|++|+.|++ |++||+.+++++..+. +
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~--~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g 237 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKM--VRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG 237 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEE--EEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEE--EEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 99999997311 0 02 7889999999887 899999999999999998 9999999999999997 4
Q ss_pred -CCCCeEEEEEcCCCceEEeeCCCee
Q 037288 462 -SNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 462 -~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
|...|++++|+|++.++++++.|-.
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~~ 263 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKWT 263 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTCE
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCE
Confidence 8899999999999888888877643
No 91
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=6.5e-24 Score=211.50 Aligned_cols=206 Identities=11% Similarity=0.058 Sum_probs=164.5
Q ss_pred eeEEeccccCcEEEEEEcCCC-CEEEEEe-CCeEEEEECCCCcEEEEee---eCCCeEEEEEec-CCcEEEEEeCCCeEE
Q 037288 248 TMHLVASFKCTVWTADFCTNP-SQAVIGT-NLGAAMVDMETGMASWVCR---SKSDILAQQVIH-SGNVVLCGFRNGAIV 321 (513)
Q Consensus 248 ~~~~~~~h~~~V~~~~~s~~g-~~l~s~s-~~~i~vwd~~~~~~~~~~~---~~~~V~~l~~~~-~~~~l~sg~~dg~i~ 321 (513)
....+.+|...|++++|+|++ ++|++|+ |+.|++||+.+++....+. |...|.+++|+| ++++|++|+.|+.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 456688999999999999999 8999886 4569999999888666654 788899999999 679999999999999
Q ss_pred EEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEee-cCCCceEEEEEcCCCC-E
Q 037288 322 TVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQ-Y 389 (513)
Q Consensus 322 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~-~ 389 (513)
+||++...... +.....|...|.+++|+| .+++++ |+.. +. ....+. +...+.++ .|+|+++ +
T Consensus 145 iwd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~--~~~~~~~h~~~v~~~-~~~~~~~~~ 219 (383)
T 3ei3_B 145 LRDFSGSVIQV-FAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH--EIFKEKLHKAKVTHA-EFNPRCDWL 219 (383)
T ss_dssp EEETTSCEEEE-EECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC--EEEEEECSSSCEEEE-EECSSCTTE
T ss_pred EEECCCCceEE-EeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC--EEEEeccCCCcEEEE-EECCCCCCE
Confidence 99999644322 344455668999999998 677766 8873 22 233343 45566665 7888888 9
Q ss_pred EEEEecCCeEEEEecCCCC--ccceEEecCCCCceeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEecC
Q 037288 390 FLASSMDGTVKLYDHRLTT--RGAVQSYEGHVNSHTRIQLGVDQ-SERFVMSGGEDCKLRIWSIRSGELVFEDKF 461 (513)
Q Consensus 390 l~s~s~dg~i~lwd~~~~~--~~~~~~~~~h~~~v~~~~~~~s~-~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~ 461 (513)
|++++.|+.|++||++... ..++..+ +|...+.. ++|+| ++++|++++.|+.|++||+.+++.+..+..
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~--~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 291 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNA--AYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIII 291 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEE--EEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEE
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEE--EEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccc
Confidence 9999999999999998322 2255555 68888877 89999 999999999999999999999877666543
No 92
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.93 E-value=6e-24 Score=215.79 Aligned_cols=217 Identities=14% Similarity=0.187 Sum_probs=177.1
Q ss_pred eccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCc
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQ 329 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 329 (513)
+.+|...|.+++| ++.++++|+. +.|++||+.+++.+..+. |...|.+++|+ +..|++|+.||.|++||+++..
T Consensus 169 ~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~ 244 (435)
T 1p22_A 169 LTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPT 244 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSS
T ss_pred EcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCC
Confidence 6678899999999 7889998865 569999999999877766 77789999996 4699999999999999999876
Q ss_pred cccccccccccCcCeEEEeeCC-eEEEeE-------eecccCcccceeEee-cCCCceEEEEEcCCCCEEEEEecCCeEE
Q 037288 330 RGCSSRAGRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLASSMDGTVK 400 (513)
Q Consensus 330 ~~~~~~~~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~dg~i~ 400 (513)
.......+.+|...|.+++|.. .+++++ |+...+... ..+. +...+.++ .+ ++++|++|+.||.|+
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~~~~~v~~~-~~--~~~~l~~g~~dg~i~ 319 (435)
T 1p22_A 245 DITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFV--RTLNGHKRGIACL-QY--RDRLVVSGSSDNTIR 319 (435)
T ss_dssp CCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEE-EE--ETTEEEEEETTSCEE
T ss_pred CceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEE--EEEcCCCCcEEEE-Ee--CCCEEEEEeCCCeEE
Confidence 5432357889999999999977 777776 988876543 3333 45566665 33 578999999999999
Q ss_pred EEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe---------EEEEecCCCCCeEEEEE
Q 037288 401 LYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGE---------LVFEDKFSNSVPSAVCW 471 (513)
Q Consensus 401 lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~---------~~~~~~~~~~~v~~v~~ 471 (513)
+||++ ...++.++.+|...+.+ ++| ++.+|++|+.||.|++||+.+++ ++..+..|.+.|++++|
T Consensus 320 iwd~~--~~~~~~~~~~h~~~v~~--~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 393 (435)
T 1p22_A 320 LWDIE--CGACLRVLEGHEELVRC--IRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF 393 (435)
T ss_dssp EEETT--TCCEEEEECCCSSCEEE--EEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE
T ss_pred EEECC--CCCEEEEEeCCcCcEEE--EEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe
Confidence 99997 55688999999999877 555 78999999999999999998776 88889999999999999
Q ss_pred cCCCceEEeeCCCe
Q 037288 472 RTQRSMGPQIEGKI 485 (513)
Q Consensus 472 ~p~~~~~~t~~~~~ 485 (513)
++..+++++.|-
T Consensus 394 --~~~~l~s~s~Dg 405 (435)
T 1p22_A 394 --DEFQIVSSSHDD 405 (435)
T ss_dssp --CSSCEEECCSSS
T ss_pred --CCCEEEEEeCCC
Confidence 444566666553
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=5e-24 Score=208.42 Aligned_cols=222 Identities=10% Similarity=0.052 Sum_probs=181.2
Q ss_pred eccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCc----EEEEeeeCCCeEEEEEecCCc-EEEEEeCCCeEEEEEC
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGM----ASWVCRSKSDILAQQVIHSGN-VVLCGFRNGAIVTVDV 325 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~----~~~~~~~~~~V~~l~~~~~~~-~l~sg~~dg~i~iwd~ 325 (513)
..+|.+.|.+++|+|++.+|++++ |+.|++||+.++. ......|...|.+++|+|+++ +|++|+.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 468999999999999999999885 5669999999887 666667889999999999999 9999999999999999
Q ss_pred -CCCccccccccccc--cCcCeEEEeeCC--eEEEeE-------eeccc---------CcccceeEeecCCCceEEEEEc
Q 037288 326 -RKRQRGCSSRAGRR--HRIPYSRLQRND--RVTNEQ-------WFELK---------ANIWPSHTTFMPSSISCLQSLQ 384 (513)
Q Consensus 326 -~~~~~~~~~~~~~~--h~~~v~~v~~~~--~~~s~~-------w~~~~---------~~~~~~~~~~~~~~v~~~~~~~ 384 (513)
.... ...+.+ |...|.+++|++ .+++++ |+... +.. ...+.+...+.++ .++
T Consensus 87 ~~~~~----~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~v~~~-~~~ 159 (342)
T 1yfq_A 87 IGSPS----FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN--SNNTKVKNKIFTM-DTN 159 (342)
T ss_dssp SSSSS----EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESC--SSSSSSCCCEEEE-EEC
T ss_pred ccCCc----eEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCe--eeEEeeCCceEEE-Eec
Confidence 7664 346778 999999999986 677776 88775 442 2334467777776 566
Q ss_pred CCCCEEEEEecCCeEEEEecCC-CCccceEEecCCCCceeEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC------eEE
Q 037288 385 LYDQYFLASSMDGTVKLYDHRL-TTRGAVQSYEGHVNSHTRIQLGVDQ-SERFVMSGGEDCKLRIWSIRSG------ELV 456 (513)
Q Consensus 385 ~~~~~l~s~s~dg~i~lwd~~~-~~~~~~~~~~~h~~~v~~~~~~~s~-~g~~l~sg~~Dg~v~vwd~~~~------~~~ 456 (513)
+++ |++++.|+.|++||++. ...........|...+.+ ++|+| ++++|++|+.||.|++|++... +.+
T Consensus 160 ~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~--i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 160 SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRD--VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp SSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEE--EEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred CCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeE--EEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 665 99999999999999973 222233445567777766 89999 9999999999999999999887 777
Q ss_pred EEecCCCC---------CeEEEEEcCCCceEEeeCCC
Q 037288 457 FEDKFSNS---------VPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 457 ~~~~~~~~---------~v~~v~~~p~~~~~~t~~~~ 484 (513)
..+..|.. .|++++|+|++.++++++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 272 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCC
Confidence 78877755 89999999998777776655
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.93 E-value=8.9e-24 Score=211.51 Aligned_cols=229 Identities=12% Similarity=0.040 Sum_probs=181.5
Q ss_pred ceeEEeccccCcEEEEEEcC-CCCEEEEEe-CCeEEEEECCCCcEEEEe--------------eeCCCeEEEEEec-CCc
Q 037288 247 STMHLVASFKCTVWTADFCT-NPSQAVIGT-NLGAAMVDMETGMASWVC--------------RSKSDILAQQVIH-SGN 309 (513)
Q Consensus 247 ~~~~~~~~h~~~V~~~~~s~-~g~~l~s~s-~~~i~vwd~~~~~~~~~~--------------~~~~~V~~l~~~~-~~~ 309 (513)
.....+.+|.+.|.+++|+| ++++|++|+ |+.|++||+.++.....+ .|...|.+++|+| +++
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 34566888999999999999 999999886 455999999987643322 2788899999999 778
Q ss_pred EEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC------eEEEeE-------eecccCcccceeEee-cCC
Q 037288 310 VVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND------RVTNEQ-------WFELKANIWPSHTTF-MPS 375 (513)
Q Consensus 310 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~------~~~s~~-------w~~~~~~~~~~~~~~-~~~ 375 (513)
+|++++.||.|++||+++.+... .+ .+...+.++.+.+ .+++++ |+...+... ..+. +..
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~ 187 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTAD---VF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS--HILQGHRQ 187 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEE---EE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC--EEECCCCS
T ss_pred EEEEEeCCCeEEEeeCCCCccce---ec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee--eeecCCCC
Confidence 99999999999999999877533 33 3778899999987 455655 888776543 3333 556
Q ss_pred CceEEEEEcCCCC-EEEEEecCCeEEEEecCCCCcc-ceEEe---------------cCCCCceeEEEEEEcCCCCEEEE
Q 037288 376 SISCLQSLQLYDQ-YFLASSMDGTVKLYDHRLTTRG-AVQSY---------------EGHVNSHTRIQLGVDQSERFVMS 438 (513)
Q Consensus 376 ~v~~~~~~~~~~~-~l~s~s~dg~i~lwd~~~~~~~-~~~~~---------------~~h~~~v~~~~~~~s~~g~~l~s 438 (513)
.+.++ .++|++. +|++++.||.|++||++. .. ++..+ .+|...+.. ++|+|++++|++
T Consensus 188 ~v~~~-~~~~~~~~ll~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~ 262 (408)
T 4a11_B 188 EILAV-SWSPRYDYILATASADSRVKLWDVRR--ASGCLITLDQHNGKKSQAVESANTAHNGKVNG--LCFTSDGLHLLT 262 (408)
T ss_dssp CEEEE-EECSSCTTEEEEEETTSCEEEEETTC--SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE--EEECTTSSEEEE
T ss_pred cEEEE-EECCCCCcEEEEEcCCCcEEEEECCC--CCcccccccccccccceeeccccccccCceeE--EEEcCCCCEEEE
Confidence 67775 6788887 689999999999999973 32 44444 568888776 899999999999
Q ss_pred EeCCCcEEEEeCCCC-----------------------------------------------eEEEEecCCCCCeEEEEE
Q 037288 439 GGEDCKLRIWSIRSG-----------------------------------------------ELVFEDKFSNSVPSAVCW 471 (513)
Q Consensus 439 g~~Dg~v~vwd~~~~-----------------------------------------------~~~~~~~~~~~~v~~v~~ 471 (513)
++.||.|++||+.++ +++..+..|...|++++|
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 342 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVF 342 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEE
Confidence 999999999998754 456667788899999999
Q ss_pred cCCCceEEeeCCCee
Q 037288 472 RTQRSMGPQIEGKIH 486 (513)
Q Consensus 472 ~p~~~~~~t~~~~~~ 486 (513)
+|++.++++++.|-.
T Consensus 343 s~~~~~l~s~~~dg~ 357 (408)
T 4a11_B 343 QSNFQELYSGSRDCN 357 (408)
T ss_dssp ETTTTEEEEEETTSC
T ss_pred cCCCCEEEEECCCCe
Confidence 999888887776643
No 95
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=1.4e-23 Score=212.78 Aligned_cols=232 Identities=17% Similarity=0.221 Sum_probs=185.3
Q ss_pred eEEeccccCcEEEEEEcCC-CCEEEEEeC-CeEEEEECCC----------CcEEEE-eeeCCCeEEEEEecCCc-EEEEE
Q 037288 249 MHLVASFKCTVWTADFCTN-PSQAVIGTN-LGAAMVDMET----------GMASWV-CRSKSDILAQQVIHSGN-VVLCG 314 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~-g~~l~s~s~-~~i~vwd~~~----------~~~~~~-~~~~~~V~~l~~~~~~~-~l~sg 314 (513)
......|.+.|++++|+|+ +.++++++. +.|++||+.+ ...... ..|...|.+++|+|++. +|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 4556789999999999997 678888864 5599999986 343333 44888899999999997 99999
Q ss_pred eCCCeEEEEECCCCcccc----ccccccccCcCeEEEeeCC----eEEEeE-------eecccCc-ccceeEe-ecCCCc
Q 037288 315 FRNGAIVTVDVRKRQRGC----SSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKAN-IWPSHTT-FMPSSI 377 (513)
Q Consensus 315 ~~dg~i~iwd~~~~~~~~----~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~-~~~~~~~-~~~~~v 377 (513)
+.||.|++||+....... ....+.+|...|.+++|+| .+++++ |+.+.+. ..+...+ .+...+
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 999999999998743211 1345678999999999988 566665 9988763 2233344 455667
Q ss_pred eEEEEEcCCCC-EEEEEecCCeEEEEecCCCC-ccceEEecCCCCceeEEEEEEcCCCC-EEEEEeCCCcEEEEeCCC--
Q 037288 378 SCLQSLQLYDQ-YFLASSMDGTVKLYDHRLTT-RGAVQSYEGHVNSHTRIQLGVDQSER-FVMSGGEDCKLRIWSIRS-- 452 (513)
Q Consensus 378 ~~~~~~~~~~~-~l~s~s~dg~i~lwd~~~~~-~~~~~~~~~h~~~v~~~~~~~s~~g~-~l~sg~~Dg~v~vwd~~~-- 452 (513)
.++ .|+|++. +|++|+.||.|++||++ . ..++..+.+|...+.. ++|+|+++ +|++++.||.|+|||+..
T Consensus 281 ~~i-~~~p~~~~~l~tg~~dg~v~vwd~~--~~~~~~~~~~~h~~~v~~--i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 281 NCL-SFNPYSEFILATGSADKTVALWDLR--NLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp EEE-EECSSCTTEEEEEETTSEEEEEETT--CTTSCSEEEECCSSCEEE--EEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred EEE-EeCCCCCCEEEEEeCCCeEEEEeCC--CCCCCeEEeecCCCCEEE--EEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 765 6778776 78999999999999998 4 3478899999999877 89999985 799999999999999987
Q ss_pred ------------CeEEEEecCCCCCeEEEEEcCCCc-eEEeeCCCe
Q 037288 453 ------------GELVFEDKFSNSVPSAVCWRTQRS-MGPQIEGKI 485 (513)
Q Consensus 453 ------------~~~~~~~~~~~~~v~~v~~~p~~~-~~~t~~~~~ 485 (513)
.+++..+..|...|++++|+|++. ++++++.+-
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg 401 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDN 401 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred cccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCC
Confidence 477888888999999999999965 777666553
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.8e-25 Score=237.54 Aligned_cols=233 Identities=9% Similarity=0.069 Sum_probs=185.1
Q ss_pred EEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCC--cEEEEee-eCCCeEEEEEecC--CcEEEEEeCCCeEEEE
Q 037288 250 HLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETG--MASWVCR-SKSDILAQQVIHS--GNVVLCGFRNGAIVTV 323 (513)
Q Consensus 250 ~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~--~~~~~~~-~~~~V~~l~~~~~--~~~l~sg~~dg~i~iw 323 (513)
..+.+|.+.|++++|+|+++++++|+ |+.|++||+.++ .....+. |...|.+++|+|+ +++|++|+.||.|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 34789999999999999999999886 556999999844 4444444 8888999999988 8999999999999999
Q ss_pred ECCCCccccccccccccCcCeEEEeeCC-----eEEEeE-------eecccCcccceeEe-ecCCCceEEEEEcC-----
Q 037288 324 DVRKRQRGCSSRAGRRHRIPYSRLQRND-----RVTNEQ-------WFELKANIWPSHTT-FMPSSISCLQSLQL----- 385 (513)
Q Consensus 324 d~~~~~~~~~~~~~~~h~~~v~~v~~~~-----~~~s~~-------w~~~~~~~~~~~~~-~~~~~v~~~~~~~~----- 385 (513)
|+++++... +..+.+|..+|.+++|+| .+++++ |+...+........ .+...+.++ .++|
T Consensus 83 d~~~~~~~~-~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l-~~~p~~~~~ 160 (753)
T 3jro_A 83 KEENGRWSQ-IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSA-SWAPATIEE 160 (753)
T ss_dssp EEETTEEEE-EEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEE-EECCCC---
T ss_pred ECCCCcccc-cccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEE-EecCccccc
Confidence 999876433 568889999999999997 477776 99887754444443 445666665 6666
Q ss_pred --------CCCEEEEEecCCeEEEEecCCCCc--cceEEecCCCCceeEEEEEEcCC---CCEEEEEeCCCcEEEEeCCC
Q 037288 386 --------YDQYFLASSMDGTVKLYDHRLTTR--GAVQSYEGHVNSHTRIQLGVDQS---ERFVMSGGEDCKLRIWSIRS 452 (513)
Q Consensus 386 --------~~~~l~s~s~dg~i~lwd~~~~~~--~~~~~~~~h~~~v~~~~~~~s~~---g~~l~sg~~Dg~v~vwd~~~ 452 (513)
++.+|++|+.||.|++||++.... ..+..+.+|...|.+ ++|+|+ +++|++|+.||.|++||+.+
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~--l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRD--VAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEE--EEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEE--EEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 589999999999999999973322 256788899999877 899999 89999999999999999998
Q ss_pred Ce-----EEEEecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 453 GE-----LVFEDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 453 ~~-----~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
++ .+.....|...|++++|+|++.++++++.|-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~ 277 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSC
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCE
Confidence 74 23334457888999999999888887766543
No 97
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=2.3e-24 Score=212.54 Aligned_cols=226 Identities=9% Similarity=0.026 Sum_probs=181.3
Q ss_pred EeccccCcEEEEEEcCC---CC--EEEEEeCCeEEEEECCCCcEEEEee------eCCCeEEEEEecC----CcEEEEEe
Q 037288 251 LVASFKCTVWTADFCTN---PS--QAVIGTNLGAAMVDMETGMASWVCR------SKSDILAQQVIHS----GNVVLCGF 315 (513)
Q Consensus 251 ~~~~h~~~V~~~~~s~~---g~--~l~s~s~~~i~vwd~~~~~~~~~~~------~~~~V~~l~~~~~----~~~l~sg~ 315 (513)
...+|...|++++|+|+ +. ++++++++.|++||+.+++.+..+. |...|.+++|+|+ +.+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 35689999999999984 33 6667788899999999887655444 4467999999999 67999999
Q ss_pred CCCeEEEEECCCCccccccccccccCcCeEEEeeCC----eEEEeE-------eecccCcccceeE--eecCCCceEEEE
Q 037288 316 RNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----RVTNEQ-------WFELKANIWPSHT--TFMPSSISCLQS 382 (513)
Q Consensus 316 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----~~~s~~-------w~~~~~~~~~~~~--~~~~~~v~~~~~ 382 (513)
.||.|++||+.+++. +..+.+|..+|.+++|+| .+++++ |+...++...... ..+...+.++ .
T Consensus 93 ~dg~i~v~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~-~ 168 (366)
T 3k26_A 93 SRGIIRIINPITMQC---IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA-D 168 (366)
T ss_dssp TTCEEEEECTTTCCE---EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE-E
T ss_pred CCCEEEEEEchhceE---eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE-E
Confidence 999999999998775 447889999999999987 577776 9888765432211 1355667775 7
Q ss_pred EcCCCCEEEEEecCCeEEEEecCCCCccce----------------------------EEecCCCCceeEEEEEEcCCCC
Q 037288 383 LQLYDQYFLASSMDGTVKLYDHRLTTRGAV----------------------------QSYEGHVNSHTRIQLGVDQSER 434 (513)
Q Consensus 383 ~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~----------------------------~~~~~h~~~v~~~~~~~s~~g~ 434 (513)
++|++++|++++.||.|++||++ ....+ ....+|...+.+ ++|+ ++
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~--~~ 242 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRIN--SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC--VRWL--GD 242 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESC--SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE--EEEE--TT
T ss_pred ECCCCCEEEEecCCCCEEEEECC--CCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE--EEEc--CC
Confidence 88899999999999999999997 33222 233458888888 6776 77
Q ss_pred EEEEEeCCCcEEEEeCCCCeE--------------EEEecCCCCCeEEEEEcCC--CceEEeeCCCee
Q 037288 435 FVMSGGEDCKLRIWSIRSGEL--------------VFEDKFSNSVPSAVCWRTQ--RSMGPQIEGKIH 486 (513)
Q Consensus 435 ~l~sg~~Dg~v~vwd~~~~~~--------------~~~~~~~~~~v~~v~~~p~--~~~~~t~~~~~~ 486 (513)
+|++++.||.|++||+.+++. +..+..|...|++++|+|+ +.++++++.+-.
T Consensus 243 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~ 310 (366)
T 3k26_A 243 LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGK 310 (366)
T ss_dssp EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSC
T ss_pred EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCc
Confidence 999999999999999988743 7778888999999999999 888888776543
No 98
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=1.5e-24 Score=220.35 Aligned_cols=224 Identities=12% Similarity=0.129 Sum_probs=167.2
Q ss_pred EeccccCcEEEEEEcC-CCCEEEEEeC-CeEEEEECCCCcEEEE---eeeCCCeEEEEEec-CCcEEEEEeCCCeEEEEE
Q 037288 251 LVASFKCTVWTADFCT-NPSQAVIGTN-LGAAMVDMETGMASWV---CRSKSDILAQQVIH-SGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 251 ~~~~h~~~V~~~~~s~-~g~~l~s~s~-~~i~vwd~~~~~~~~~---~~~~~~V~~l~~~~-~~~~l~sg~~dg~i~iwd 324 (513)
...+|...|+|++|+| ++.+||+|+. +.|+|||+.++..... ..|.+.|++|+|+| ++++|++|+.||+|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 4678899999999999 5678998865 5599999987764333 34888999999998 689999999999999999
Q ss_pred CCCCccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCcccceeEeecCCCceEEEEEcCCCC-EEEEE
Q 037288 325 VRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQLYDQ-YFLAS 393 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~ 393 (513)
++...... +.....+...+.+++|++ .+++|+ |+.....+. ....|...|.++ .|+|++. +|++|
T Consensus 194 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~--~~~~h~~~v~~v-~~~p~~~~~~~s~ 269 (435)
T 4e54_B 194 FKGNILRV-FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELW--NLRMHKKKVTHV-ALNPCCDWFLATA 269 (435)
T ss_dssp TTSCEEEE-EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCC--CSBCCSSCEEEE-EECTTCSSEEEEE
T ss_pred ccCCceeE-EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeE--EEecccceEEee-eecCCCceEEEEe
Confidence 98764332 333445566788999988 566665 887543322 112345667776 6777765 78899
Q ss_pred ecCCeEEEEecCCCCcc-ceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCC------Ce
Q 037288 394 SMDGTVKLYDHRLTTRG-AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNS------VP 466 (513)
Q Consensus 394 s~dg~i~lwd~~~~~~~-~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~------~v 466 (513)
+.|+.|++||++..... .+....+|...|.. ++|+|+|++|++|+.||.|+|||+.+++....+..|.. .+
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~--~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 347 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNA--ACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTP 347 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEE--CCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCC
T ss_pred cCcceeeEEecccccccceEEEeeeccccccc--eeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccccee
Confidence 99999999999843322 33344679998877 89999999999999999999999999988777654432 23
Q ss_pred EEEEEcCCCceEEe
Q 037288 467 SAVCWRTQRSMGPQ 480 (513)
Q Consensus 467 ~~v~~~p~~~~~~t 480 (513)
..++|+|++.+++.
T Consensus 348 ~~~~~~~~~~~~~~ 361 (435)
T 4e54_B 348 IKAAWHPRYNLIVV 361 (435)
T ss_dssp CBCEECSSSSCEEE
T ss_pred EEEEEcCCCCEEEE
Confidence 34567776544443
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=1.2e-23 Score=215.10 Aligned_cols=221 Identities=14% Similarity=0.176 Sum_probs=180.4
Q ss_pred eEEeccccCcE-EEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEEC
Q 037288 249 MHLVASFKCTV-WTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 249 ~~~~~~h~~~V-~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~ 325 (513)
...+.+|...| .++.+ ++.++++|+. +.|++||+.+++.+..+. |.+.|.+++|++++ +|++|+.||+|++||+
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEET
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEEC
Confidence 45688998885 66666 5678888865 559999999999887776 88889999999988 9999999999999999
Q ss_pred CCCccccccccccccCcCeEEEeeCC-----eEEEeE-------eecccCcccce---------------------eEe-
Q 037288 326 RKRQRGCSSRAGRRHRIPYSRLQRND-----RVTNEQ-------WFELKANIWPS---------------------HTT- 371 (513)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~v~~v~~~~-----~~~s~~-------w~~~~~~~~~~---------------------~~~- 371 (513)
++++. +..+.+|...|.+++|.+ .+++++ |+...+..... ...
T Consensus 191 ~~~~~---~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 191 KKGCC---THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp TTTEE---EEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred CCCcE---EEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 98875 458889999999999973 577776 88876653321 111
Q ss_pred ecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 037288 372 FMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIR 451 (513)
Q Consensus 372 ~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~ 451 (513)
.+...+. .+++++++|++++.||.|++||++ ...++..+.+|...+.. ++|+|++++|++|+.||.|++||+.
T Consensus 268 ~~~~~v~---~~~~~~~~l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~--~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 268 GHMASVR---TVSGHGNIVVSGSYDNTLIVWDVA--QMKCLYILSGHTDRIYS--TIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp CCSSCEE---EEEEETTEEEEEETTSCEEEEETT--TTEEEEEECCCSSCEEE--EEEETTTTEEEEEETTSCEEEEETT
T ss_pred CccceEE---EEcCCCCEEEEEeCCCeEEEEECC--CCcEEEEecCCCCCEEE--EEEcCCCCEEEEEeCCCcEEEEECC
Confidence 1223333 446789999999999999999997 55688899999999877 8899999999999999999999999
Q ss_pred CCeEEEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 452 SGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 452 ~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+++++..+..|...|.+++|++. ++++++.|
T Consensus 341 ~~~~~~~~~~h~~~v~~~~~~~~--~l~s~s~d 371 (464)
T 3v7d_B 341 NGELMYTLQGHTALVGLLRLSDK--FLVSAAAD 371 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECSS--EEEEEETT
T ss_pred CCcEEEEEeCCCCcEEEEEEcCC--EEEEEeCC
Confidence 99999999999999999999853 44444444
No 100
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=7e-23 Score=205.59 Aligned_cols=223 Identities=14% Similarity=0.147 Sum_probs=180.4
Q ss_pred eEEeccccCc--EEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee--eCCCeEEEEEecCCcEEEEEeCCCeEEEEE
Q 037288 249 MHLVASFKCT--VWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR--SKSDILAQQVIHSGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 249 ~~~~~~h~~~--V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~--~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd 324 (513)
+....+|... +.+++|++ +.+++++.++.|++||+.+++...... |...|.+++|+|++++|++|+.||.|++||
T Consensus 84 ~~~~~~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp EEECTTCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeeCCCCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence 4445567655 55577765 456667788889999999998777665 577899999999999999999999999999
Q ss_pred CCCCccccccccccccCcCeEEEeeCC-eEEEeE-------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC
Q 037288 325 VRKRQRGCSSRAGRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD 396 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d 396 (513)
+.+++. +..+.+|...|.+++|++ .+++++ |+.............+...+.++ .++|++++|++|+.|
T Consensus 163 ~~~~~~---~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 163 VESQTK---LRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGL-AWRSDGLQLASGGND 238 (401)
T ss_dssp TTTCCE---EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEE-EECTTSSEEEEEETT
T ss_pred CcCCeE---EEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEE-EEcCCCCEEEEEeCC
Confidence 998875 457889999999999988 677766 88875443323333456666665 788899999999999
Q ss_pred CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCC-CEEEEEe--CCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcC
Q 037288 397 GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSE-RFVMSGG--EDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRT 473 (513)
Q Consensus 397 g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g-~~l~sg~--~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p 473 (513)
+.|++||++ ...++..+.+|...+.. ++|+|++ .++++|+ .|+.|++||+.+++++..+.. ...|++++|+|
T Consensus 239 ~~v~iwd~~--~~~~~~~~~~~~~~v~~--~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-~~~v~~~~~s~ 313 (401)
T 4aez_A 239 NVVQIWDAR--SSIPKFTKTNHNAAVKA--VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-GSQVTSLIWSP 313 (401)
T ss_dssp SCEEEEETT--CSSEEEEECCCSSCCCE--EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-SSCEEEEEECS
T ss_pred CeEEEccCC--CCCccEEecCCcceEEE--EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-CCcEEEEEECC
Confidence 999999997 55588889999999887 8999976 4566655 799999999999999998864 56799999999
Q ss_pred CCceEEee
Q 037288 474 QRSMGPQI 481 (513)
Q Consensus 474 ~~~~~~t~ 481 (513)
++..++++
T Consensus 314 ~~~~l~~~ 321 (401)
T 4aez_A 314 HSKEIMST 321 (401)
T ss_dssp SSSEEEEE
T ss_pred CCCeEEEE
Confidence 97776664
No 101
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.7e-23 Score=210.56 Aligned_cols=260 Identities=9% Similarity=-0.039 Sum_probs=180.7
Q ss_pred cccccccCCCCCccccCcceeeecccceEEEecCCCCccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCccc
Q 037288 164 DNKTESSKAPEHIWRLNKASILMPSSVSCIKLFGKHPSCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSI 243 (513)
Q Consensus 164 ~~~~~~~~~~~~~w~p~~~~~~~~s~i~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 243 (513)
.+++....+.++.|+|++..+...+.=..++ .++.......|+..-.. +.. .|+...+.+.+
T Consensus 10 ~~~~~~~~v~sv~~SpDG~~iASas~D~TV~-d~~~~~~l~gh~~~v~~-V~F----------------sPdg~~~~~~~ 71 (588)
T 2j04_A 10 DRKEFEDWKNNLTWARDGTLYLTTFPDISIG-QPKYAKDINCNSKNLFH-VKE----------------FPLEFENKLDF 71 (588)
T ss_dssp CSCCCSSSSCCEEECTTSCEEEECSSSEEEE-EECCCSCCSSBGGGTEE-EEE----------------ECCCCCCTTTT
T ss_pred cHhHhhccEEEEEECCCCCEEEEEcCCceee-cccccceecCCCccEEE-EEE----------------CCCCCcceEEE
Confidence 5677778899999999987777766555555 34433333222221111 111 11112222332
Q ss_pred ccCceeEEec-cccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEeeeCC-----CeEEEEEecCCcEEEEEeC
Q 037288 244 IRRSTMHLVA-SFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCRSKS-----DILAQQVIHSGNVVLCGFR 316 (513)
Q Consensus 244 ~~~~~~~~~~-~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~~~~-----~V~~l~~~~~~~~l~sg~~ 316 (513)
........+. .|...|.+++|+|+|++||+++. +.|++||.++ ++..+.|+. .|.+++|+|||++|++|+.
T Consensus 72 ~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~ 149 (588)
T 2j04_A 72 ELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNE 149 (588)
T ss_dssp SCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEET
T ss_pred EeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcC
Confidence 2211111122 56889999999999999998865 5599999654 555555443 4999999999999999999
Q ss_pred CCeEEEEECCCCcccc----ccccc----cccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCC
Q 037288 317 NGAIVTVDVRKRQRGC----SSRAG----RRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQ 388 (513)
Q Consensus 317 dg~i~iwd~~~~~~~~----~~~~~----~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 388 (513)
||+|++||+..+.... .+.++ .+|..+|.+++ |+|+|
T Consensus 150 DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVa----------------------------------wSPdg- 194 (588)
T 2j04_A 150 DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIV----------------------------------WYEDV- 194 (588)
T ss_dssp TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEE----------------------------------EETTE-
T ss_pred CCEEEEEECCCCccccccceeeeeeecccccccccEEEEE----------------------------------EcCCc-
Confidence 9999999998874200 02343 56777777754 45688
Q ss_pred EEEEEecCCeEEEEecCCCCcc---ceEEe-cCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCC
Q 037288 389 YFLASSMDGTVKLYDHRLTTRG---AVQSY-EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNS 464 (513)
Q Consensus 389 ~l~s~s~dg~i~lwd~~~~~~~---~~~~~-~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~ 464 (513)
+++++.|+.|++||+. ... ..+++ .+|...|.. ++|+ |+.|++++ |++|++||+.+++......+|.+
T Consensus 195 -Laass~D~tVrlWd~~--~~~~~~~~~tL~~~h~~~V~s--vaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~ 266 (588)
T 2j04_A 195 -LVAALSNNSVFSMTVS--ASSHQPVSRMIQNASRRKITD--LKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLE 266 (588)
T ss_dssp -EEEEETTCCEEEECCC--SSSSCCCEEEEECCCSSCCCC--EEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCS
T ss_pred -EEEEeCCCeEEEEECC--CCccccceeeecccccCcEEE--EEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCc
Confidence 8889999999999996 333 23567 478888877 7888 68999988 79999999999888544447899
Q ss_pred CeEEEEE--cCCCceEEeeCCCee
Q 037288 465 VPSAVCW--RTQRSMGPQIEGKIH 486 (513)
Q Consensus 465 ~v~~v~~--~p~~~~~~t~~~~~~ 486 (513)
.|..++| +|++..++++..+-.
T Consensus 267 ~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 267 NFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp CCCEEEETTCSSCEEEEECSSCEE
T ss_pred eEEEEEeeeCCCCCEEEEEcCCCC
Confidence 9999999 999877777775443
No 102
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.92 E-value=9.9e-23 Score=196.90 Aligned_cols=213 Identities=12% Similarity=0.133 Sum_probs=162.8
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCe-EEEEECCCCc-EEE-EeeeCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLG-AAMVDMETGM-ASW-VCRSKS 297 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~-i~vwd~~~~~-~~~-~~~~~~ 297 (513)
..+|.+.+|++.+. ..+..+.+|...+.++.+ ++.++++++.+. +++|+..++. .+. ...|..
T Consensus 86 s~Dg~v~iw~~~~~------------~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (318)
T 4ggc_A 86 TSSAEVQLWDVQQQ------------KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ 151 (318)
T ss_dssp ETTSEEEEEETTTT------------EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS
T ss_pred ECCCcEEEeecCCc------------eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccC
Confidence 35788888877643 235668899998887665 567888887655 8899988764 333 344788
Q ss_pred CeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccc-ccccccccCcCeEEEeeCC---eEE---EeE-------eecccC
Q 037288 298 DILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGC-SSRAGRRHRIPYSRLQRND---RVT---NEQ-------WFELKA 363 (513)
Q Consensus 298 ~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~~---~~~---s~~-------w~~~~~ 363 (513)
.+.++.|++++++|++++.|+.|++||+++++... .......|...|.++.+.+ .++ +++ |+....
T Consensus 152 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~ 231 (318)
T 4ggc_A 152 EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 231 (318)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC
T ss_pred ceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc
Confidence 89999999999999999999999999998765432 1335667888999999988 222 222 776655
Q ss_pred cccceeEeecCCCceEEEEEcCCCCEEEEEe--cCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeC
Q 037288 364 NIWPSHTTFMPSSISCLQSLQLYDQYFLASS--MDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE 441 (513)
Q Consensus 364 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s--~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~ 441 (513)
.. .....+...+..+ .+.+++..+++++ .|+.|++||++ ...++.++.+|.+.|++ ++|+|+|++|++|+.
T Consensus 232 ~~--~~~~~~~~~v~~~-~~~~~~~~~~~~sg~~d~~i~iwd~~--~~~~~~~l~gH~~~V~~--l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 232 AC--LSAVDAHSQVCSI-LWSPHYKELISGHGFAQNQLVIWKYP--TMAKVAELKGHTSRVLS--LTMSPDGATVASAAA 304 (318)
T ss_dssp CE--EEEEECSSCEEEE-EEETTTTEEEEEECTTTCCEEEEETT--TCCEEEEECCCSSCEEE--EEECTTSSCEEEEET
T ss_pred cc--cccccceeeeeee-eecccccceEEEEEcCCCEEEEEECC--CCcEEEEEcCCCCCEEE--EEEcCCCCEEEEEec
Confidence 43 2334445556655 6677888777655 79999999997 56689999999999887 899999999999999
Q ss_pred CCcEEEEeCCCCe
Q 037288 442 DCKLRIWSIRSGE 454 (513)
Q Consensus 442 Dg~v~vwd~~~~~ 454 (513)
||+|+|||+.+..
T Consensus 305 D~~v~iWd~~~~d 317 (318)
T 4ggc_A 305 DETLRLWRCFELD 317 (318)
T ss_dssp TTEEEEECCSCCC
T ss_pred CCeEEEEECCCCC
Confidence 9999999997654
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.8e-22 Score=205.83 Aligned_cols=225 Identities=8% Similarity=-0.004 Sum_probs=176.9
Q ss_pred eccccCcEEEEEEcCCCCEE-EEEe-CCeEEEEECC--CCcEEEEe---eeCCCeEEEEEecCCcEEEEEeCCCeEEEEE
Q 037288 252 VASFKCTVWTADFCTNPSQA-VIGT-NLGAAMVDME--TGMASWVC---RSKSDILAQQVIHSGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l-~s~s-~~~i~vwd~~--~~~~~~~~---~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd 324 (513)
..+|...|++++|+|++++| ++|+ |+.|++||+. ++..+..+ .+...|.+++|+|++++|++|+.||.|++||
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 34677789999999999986 7774 5679999999 78766665 4567899999999999999999999999999
Q ss_pred CCCCcccc-ccccccccCcCeEEEeeCC------eEEEeE-------eecccCcccceeEeecCCCceEEEEEcCCCCEE
Q 037288 325 VRKRQRGC-SSRAGRRHRIPYSRLQRND------RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYF 390 (513)
Q Consensus 325 ~~~~~~~~-~~~~~~~h~~~v~~v~~~~------~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 390 (513)
+....... ....+.+|...|.+++|+| .+++++ |+...+.........+...+.++ .|+ ++++|
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~-~~s-d~~~l 255 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSI-CCG-KDYLL 255 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEE-EEC-STTEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEE-EEC-CCCEE
Confidence 98876432 2447889999999999987 366666 88877664332233466677776 677 99999
Q ss_pred EEEecCCeEEEEecCCCCccceEEecCC-------------------------CCceeEEEEEEcCCCCEEEEEe-CCCc
Q 037288 391 LASSMDGTVKLYDHRLTTRGAVQSYEGH-------------------------VNSHTRIQLGVDQSERFVMSGG-EDCK 444 (513)
Q Consensus 391 ~s~s~dg~i~lwd~~~~~~~~~~~~~~h-------------------------~~~v~~~~~~~s~~g~~l~sg~-~Dg~ 444 (513)
++++.|+.|++||++ ...++..+..+ ...+ ..++|+|++++|++++ .|+.
T Consensus 256 ~s~~~d~~v~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~i~~~~~~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWK--TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAV--SKIIKSKNLPFVAFFVEATKC 331 (450)
T ss_dssp EEEESSSEEEEEETT--TCCEEEEEECHHHHGGGCCTTSBC----------CBCCCE--EEEEECSSSSEEEEEETTCSE
T ss_pred EEEeCCCeEEEEECC--CCcEeeeecchhhhhhhhhhcccccccccccccccceEEE--EEEEEeCCCCEEEEEECCCCe
Confidence 999999999999997 44566666532 2234 4489999999999999 8999
Q ss_pred EEEEeC--CCC---eEEEEecCCCCCeEEEEEcCCCceEEeeCC
Q 037288 445 LRIWSI--RSG---ELVFEDKFSNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 445 v~vwd~--~~~---~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
|++|++ .++ +.+..+..+ ..|.+++|+|+..+++....
T Consensus 332 i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 332 IIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp EEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCT
T ss_pred EEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecc
Confidence 999999 666 777778777 78999999997655555443
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.3e-23 Score=204.39 Aligned_cols=187 Identities=10% Similarity=0.063 Sum_probs=145.0
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCC--CCEEEEEeC-CeEEEEECCCCc---EEEEeee
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTN--PSQAVIGTN-LGAAMVDMETGM---ASWVCRS 295 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~--g~~l~s~s~-~~i~vwd~~~~~---~~~~~~~ 295 (513)
.+|.+.+|++.+... ..+..+.+|...|.+++|+|+ +.++++++. +.|++||+.++. ......|
T Consensus 77 ~dg~v~iwd~~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 146 (379)
T 3jrp_A 77 YDGKVLIWKEENGRW----------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH 146 (379)
T ss_dssp TTSCEEEEEEETTEE----------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC
T ss_pred cCCEEEEEEcCCCce----------eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC
Confidence 478888888764321 135667889999999999999 899998865 569999998873 3344458
Q ss_pred CCCeEEEEEec-------------CCcEEEEEeCCCeEEEEECCCCcccc-ccccccccCcCeEEEeeCCeEEEeEeecc
Q 037288 296 KSDILAQQVIH-------------SGNVVLCGFRNGAIVTVDVRKRQRGC-SSRAGRRHRIPYSRLQRNDRVTNEQWFEL 361 (513)
Q Consensus 296 ~~~V~~l~~~~-------------~~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~~~~~s~~w~~~ 361 (513)
...|.+++|+| ++.+|++|+.||.|++||++...... ....+.+|..+|.+++
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~------------- 213 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA------------- 213 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEE-------------
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEE-------------
Confidence 88899999999 68999999999999999998765321 1345667777777754
Q ss_pred cCcccceeEeecCCCceEEEEEcCC---CCEEEEEecCCeEEEEecCCCCcc-ceEEe--cCCCCceeEEEEEEcCCCCE
Q 037288 362 KANIWPSHTTFMPSSISCLQSLQLY---DQYFLASSMDGTVKLYDHRLTTRG-AVQSY--EGHVNSHTRIQLGVDQSERF 435 (513)
Q Consensus 362 ~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~s~s~dg~i~lwd~~~~~~~-~~~~~--~~h~~~v~~~~~~~s~~g~~ 435 (513)
|+|+ +++|++++.||.|++||++..... ....+ ..|...+.. ++|+|++++
T Consensus 214 ---------------------~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~g~~ 270 (379)
T 3jrp_A 214 ---------------------WSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR--ASWSLSGNV 270 (379)
T ss_dssp ---------------------ECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEE--EEECSSSCC
T ss_pred ---------------------ECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEE--EEEcCCCCE
Confidence 4567 899999999999999999732212 12222 347777766 899999999
Q ss_pred EEEEeCCCcEEEEeCCCCe
Q 037288 436 VMSGGEDCKLRIWSIRSGE 454 (513)
Q Consensus 436 l~sg~~Dg~v~vwd~~~~~ 454 (513)
|++++.||.|++|++..+.
T Consensus 271 l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 271 LALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp EEEEESSSSEEEEEEEETT
T ss_pred EEEecCCCcEEEEeCCCCC
Confidence 9999999999999998543
No 105
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.92 E-value=8.1e-24 Score=215.00 Aligned_cols=227 Identities=13% Similarity=0.167 Sum_probs=172.0
Q ss_pred cccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCc-----------EEEEee-eC------------CCeEEEEEecCC
Q 037288 254 SFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGM-----------ASWVCR-SK------------SDILAQQVIHSG 308 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~-----------~~~~~~-~~------------~~V~~l~~~~~~ 308 (513)
.|.+.|.+++|+|+|.+||+|+. +.|+|||+.+++ ....+. |. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 46789999999999999999865 559999998876 244443 66 779999999998
Q ss_pred --cEEEEEeCCCeEEEEECCCCccccc------------------------------------c-ccccccCcCeEEEee
Q 037288 309 --NVVLCGFRNGAIVTVDVRKRQRGCS------------------------------------S-RAGRRHRIPYSRLQR 349 (513)
Q Consensus 309 --~~l~sg~~dg~i~iwd~~~~~~~~~------------------------------------~-~~~~~h~~~v~~v~~ 349 (513)
..|++|+.|+.|++||+........ . ....+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 7999999999999999876432100 0 114689999999999
Q ss_pred CC---eEEEeE------eecccCc-ccce------eEeecCCCceEEEEEcCCC-CEEEEEecCCeEEEEecCCCCccc-
Q 037288 350 ND---RVTNEQ------WFELKAN-IWPS------HTTFMPSSISCLQSLQLYD-QYFLASSMDGTVKLYDHRLTTRGA- 411 (513)
Q Consensus 350 ~~---~~~s~~------w~~~~~~-~~~~------~~~~~~~~v~~~~~~~~~~-~~l~s~s~dg~i~lwd~~~~~~~~- 411 (513)
+| .++++. |+..... .... ....+...+.++ .|+|++ ++|++|+.||.|++||++ ....
T Consensus 186 ~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~l~s~~~dg~i~iwd~~--~~~~~ 262 (447)
T 3dw8_B 186 NSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAA-EFHPNSCNTFVYSSSKGTIRLCDMR--ASALC 262 (447)
T ss_dssp CTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEE-EECSSCTTEEEEEETTSCEEEEETT--TCSSS
T ss_pred cCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEE-EECCCCCcEEEEEeCCCeEEEEECc--CCccc
Confidence 99 555554 8876322 1110 111345566665 788888 999999999999999998 4333
Q ss_pred ---eEEecCCCC------------ceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CeEEEEecCCCCC----------
Q 037288 412 ---VQSYEGHVN------------SHTRIQLGVDQSERFVMSGGEDCKLRIWSIRS-GELVFEDKFSNSV---------- 465 (513)
Q Consensus 412 ---~~~~~~h~~------------~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~-~~~~~~~~~~~~~---------- 465 (513)
+..+.+|.. .+.. ++|+|+|++|++++. +.|++||+++ ++++..+..|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~ 339 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISD--VKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEN 339 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEE--EEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHT
T ss_pred cceeeEeccCCCccccccccccCceEEE--EEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccc
Confidence 788888876 6766 899999999999998 9999999997 8888888777532
Q ss_pred -----eEEEEEcCCCceEEeeCCCee
Q 037288 466 -----PSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 466 -----v~~v~~~p~~~~~~t~~~~~~ 486 (513)
+..++|+|++.++++++.|-.
T Consensus 340 ~~i~~~~~~~~s~~~~~l~s~s~dg~ 365 (447)
T 3dw8_B 340 DCIFDKFECCWNGSDSVVMTGSYNNF 365 (447)
T ss_dssp SGGGCCCCEEECTTSSEEEEECSTTE
T ss_pred cccccceEEEECCCCCEEEEeccCCE
Confidence 234999999888888776644
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=4.3e-23 Score=218.30 Aligned_cols=221 Identities=13% Similarity=0.083 Sum_probs=183.1
Q ss_pred ccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCC----cEEEEe-eeCCC-eEEEEEec--CCcEEEEEeCCCeEEEEE
Q 037288 253 ASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETG----MASWVC-RSKSD-ILAQQVIH--SGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 253 ~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~----~~~~~~-~~~~~-V~~l~~~~--~~~~l~sg~~dg~i~iwd 324 (513)
..|...|.+++|+|++++|++++++.|++||+.++ +....+ .|... |.+++|+| ++++|++|+.||.|++||
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 36789999999999999999999989999999988 655555 48889 99999999 999999999999999999
Q ss_pred CCCC------ccccccccccccCcCeEEEeeCC---eEEEeE-----------eecccCcccceeEe-ecCCCceEEEEE
Q 037288 325 VRKR------QRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-----------WFELKANIWPSHTT-FMPSSISCLQSL 383 (513)
Q Consensus 325 ~~~~------~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-----------w~~~~~~~~~~~~~-~~~~~v~~~~~~ 383 (513)
+.++ .... ...+..|..+|.+++|+| .+++++ |+ .+. ....+ .+...+.++ .|
T Consensus 95 ~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~--~~~~~~~~~~~v~~~-~~ 168 (615)
T 1pgu_A 95 WTFDKESNSVEVNV-KSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGN--SLGEVSGHSQRINAC-HL 168 (615)
T ss_dssp EEEEGGGTEEEEEE-EEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCC--EEEECCSCSSCEEEE-EE
T ss_pred CCCCcccccccccc-cchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCC--cceeeecCCccEEEE-EE
Confidence 9754 2222 557888999999999999 555544 33 222 12222 234556664 78
Q ss_pred cCCCC-EEEEEecCCeEEEEecCCCCccceEEecCCCC---ceeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEE
Q 037288 384 QLYDQ-YFLASSMDGTVKLYDHRLTTRGAVQSYEGHVN---SHTRIQLGVDQS-ERFVMSGGEDCKLRIWSIRSGELVFE 458 (513)
Q Consensus 384 ~~~~~-~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~---~v~~~~~~~s~~-g~~l~sg~~Dg~v~vwd~~~~~~~~~ 458 (513)
+|++. .|++++.|+.|++||+. ....+..+.+|.. .+.+ ++|+|+ +++|++++.||.|++||+.+++.+..
T Consensus 169 ~~~~~~~l~~~~~d~~v~vwd~~--~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 169 KQSRPMRSMTVGDDGSVVFYQGP--PFKFSASDRTHHKQGSFVRD--VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKY 244 (615)
T ss_dssp CSSSSCEEEEEETTTEEEEEETT--TBEEEEEECSSSCTTCCEEE--EEECSTTCCEEEEEETTCCEEEEETTTCCEEEE
T ss_pred CCCCCcEEEEEeCCCcEEEEeCC--CcceeeeecccCCCCceEEE--EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEE
Confidence 88887 89999999999999987 5558889999998 8877 899999 99999999999999999999999999
Q ss_pred e-c---CCCCCeEEEEEcCCCceEEeeCCC
Q 037288 459 D-K---FSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 459 ~-~---~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+ . .|...|.+++|+ ++.++++++.+
T Consensus 245 ~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp CCBTTBCCCSCEEEEEES-SSSEEEEEETT
T ss_pred ecccccccCCceEEEEEc-CCCEEEEEcCC
Confidence 8 6 789999999999 87777776655
No 107
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.7e-23 Score=212.40 Aligned_cols=211 Identities=11% Similarity=0.096 Sum_probs=165.6
Q ss_pred eeEEe-ccccCcEEEEEEcC-CCCEEEEEeC-CeEEEEECCC---Cc---EEEEeeeCCCeEEEEEecCCcEEEEEeCCC
Q 037288 248 TMHLV-ASFKCTVWTADFCT-NPSQAVIGTN-LGAAMVDMET---GM---ASWVCRSKSDILAQQVIHSGNVVLCGFRNG 318 (513)
Q Consensus 248 ~~~~~-~~h~~~V~~~~~s~-~g~~l~s~s~-~~i~vwd~~~---~~---~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg 318 (513)
.+..+ .+|...|++++|+| ++.+|++|+. +.|++||+.+ +. ....+.|...|.+++|+|++++|++|+.||
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 35566 88999999999999 9999998865 5599999876 32 344456889999999999999999999999
Q ss_pred eEEEEECC---CCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEE-EEcCCCCEEEEEe
Q 037288 319 AIVTVDVR---KRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQ-SLQLYDQYFLASS 394 (513)
Q Consensus 319 ~i~iwd~~---~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~l~s~s 394 (513)
.|++||+. .++. ...+..| .+..+.|++ . .+...+.++. .+++++.+|++++
T Consensus 134 ~i~vwd~~~~~~~~~---~~~~~~~--~i~~~~~~~----------------~---~~~~~~~~~~~~~~~~~~~l~~~~ 189 (437)
T 3gre_A 134 QIIVLKVNHYQQESE---VKFLNCE--CIRKINLKN----------------F---GKNEYAVRMRAFVNEEKSLLVALT 189 (437)
T ss_dssp EEEEEEEEEEEETTE---EEEEEEE--EEEEEEGGG----------------G---SSCCCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEEeccccCCce---eeccccc--eeEEEEccC----------------c---ccccCceEEEEEEcCCCCEEEEEe
Confidence 99999995 3332 2233333 444544422 0 0233344432 2567899999999
Q ss_pred cCCeEEEEecCCCCccceEEecC--CCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEec-CCCCCeEEEEE
Q 037288 395 MDGTVKLYDHRLTTRGAVQSYEG--HVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDK-FSNSVPSAVCW 471 (513)
Q Consensus 395 ~dg~i~lwd~~~~~~~~~~~~~~--h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~-~~~~~v~~v~~ 471 (513)
.|+.|++||++ ...++..+.+ |...+.+ ++|+|++++|++|+.||.|++||+++++++..+. .|..+|++++|
T Consensus 190 ~d~~i~iwd~~--~~~~~~~~~~~~h~~~v~~--~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 190 NLSRVIIFDIR--TLERLQIIENSPRHGAVSS--ICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp TTSEEEEEETT--TCCEEEEEECCGGGCCEEE--EEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred CCCeEEEEeCC--CCeeeEEEccCCCCCceEE--EEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 99999999998 5568888888 7888877 8899999999999999999999999999999886 66778999977
Q ss_pred cC----CCceEEeeCCCee
Q 037288 472 RT----QRSMGPQIEGKIH 486 (513)
Q Consensus 472 ~p----~~~~~~t~~~~~~ 486 (513)
+| ++.++++++.|-.
T Consensus 266 ~~~~s~~~~~l~s~~~dg~ 284 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTF 284 (437)
T ss_dssp CTTTCTTEEEEEEESTTEE
T ss_pred ccccCCCccEEEEEcCCCc
Confidence 65 4668888877753
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=5.6e-22 Score=198.37 Aligned_cols=234 Identities=14% Similarity=0.122 Sum_probs=173.6
Q ss_pred CCccEEEEecCCCCCCCCCcccccC-ceeEEeccccCcEEEEEEcC-CCCEEEEEe-CCeEEEEECCCCcEEEEeeeCCC
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRR-STMHLVASFKCTVWTADFCT-NPSQAVIGT-NLGAAMVDMETGMASWVCRSKSD 298 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~~~~s~-~g~~l~s~s-~~~i~vwd~~~~~~~~~~~~~~~ 298 (513)
.+|.+.+|++.+............. .......+|...|.+++|+| ++.++++++ ++.|++||+.+++....+.+...
T Consensus 64 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (408)
T 4a11_B 64 SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEET 143 (408)
T ss_dssp TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCc
Confidence 4788999998865543221000000 00001246999999999999 777888876 56699999999999988889999
Q ss_pred eEEEEEecCC---cEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---e-EEEeE-------eecccCc
Q 037288 299 ILAQQVIHSG---NVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---R-VTNEQ-------WFELKAN 364 (513)
Q Consensus 299 V~~l~~~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~-~~s~~-------w~~~~~~ 364 (513)
+.++.|++.+ .++++|+.||.|++||+++++. +..+.+|...|.+++|+| . +++++ |+.+.+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 144 VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC---SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC---CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce---eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 9999999854 5999999999999999998875 447889999999999999 3 66666 8887654
Q ss_pred ccceeE---------------eecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCC---------------------
Q 037288 365 IWPSHT---------------TFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTT--------------------- 408 (513)
Q Consensus 365 ~~~~~~---------------~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~--------------------- 408 (513)
...... ..+...+.++ .++|++++|++++.||.|++||++...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (408)
T 4a11_B 221 GCLITLDQHNGKKSQAVESANTAHNGKVNGL-CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTV 299 (408)
T ss_dssp CCSEECCTTTTCSCCCTTTSSCSCSSCEEEE-EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEE
T ss_pred cccccccccccccceeeccccccccCceeEE-EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEE
Confidence 211111 2344566665 788999999999999999999987421
Q ss_pred ------------------------ccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC
Q 037288 409 ------------------------RGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF 461 (513)
Q Consensus 409 ------------------------~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~ 461 (513)
..++..+.+|...|.. ++|+|++++|++|+.||.|++||+.+++++.....
T Consensus 300 ~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~--~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 374 (408)
T 4a11_B 300 SCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDC--CVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDE 374 (408)
T ss_dssp CCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEE--EEEETTTTEEEEEETTSCEEEEEECC---------
T ss_pred ecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEE--EEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCc
Confidence 1246677889998877 89999999999999999999999999988776543
No 109
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1e-22 Score=207.71 Aligned_cols=217 Identities=11% Similarity=0.025 Sum_probs=172.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCc---EEEEeee--------------------------------------
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGM---ASWVCRS-------------------------------------- 295 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~---~~~~~~~-------------------------------------- 295 (513)
.++.+++|+++|++|++++++.|++||+.+|+ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 57889999999999998899999999999998 4444331
Q ss_pred -----------------CCCeEEEEEecCCcEE-EEEeCCCeEEEEECC--CCcccccccccc--ccCcCeEEEeeCC--
Q 037288 296 -----------------KSDILAQQVIHSGNVV-LCGFRNGAIVTVDVR--KRQRGCSSRAGR--RHRIPYSRLQRND-- 351 (513)
Q Consensus 296 -----------------~~~V~~l~~~~~~~~l-~sg~~dg~i~iwd~~--~~~~~~~~~~~~--~h~~~v~~v~~~~-- 351 (513)
.+.|.+++|+|++++| ++|+.||.|++||+. .+.. +..+. .|...|.+++|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~---~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV---LKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC---EEEEEEEECSSCEEEEEECTTS
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce---eeeeecccCCCCceEEEEcCCC
Confidence 1259999999999985 899999999999998 6654 33454 6678999999998
Q ss_pred -eEEEeE-------eecccCccc--ceeE-eecCCCceEEEEEcCC---CCEEEEEecCCeEEEEecCCCCccceEE-ec
Q 037288 352 -RVTNEQ-------WFELKANIW--PSHT-TFMPSSISCLQSLQLY---DQYFLASSMDGTVKLYDHRLTTRGAVQS-YE 416 (513)
Q Consensus 352 -~~~s~~-------w~~~~~~~~--~~~~-~~~~~~v~~~~~~~~~---~~~l~s~s~dg~i~lwd~~~~~~~~~~~-~~ 416 (513)
.+++++ |++..+... .... ..+...+.++ .|+|+ +++|++|+.|+.|++||++ ....+.. +.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~~sp~~~~~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~ 238 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDV-HLIKDSDGHQFIITSDRDEHIKISHYP--QCFIVDKWLF 238 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEE-EEEECTTSCEEEEEEETTSCEEEEEES--CTTCEEEECC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEE-EEcCCCCCCcEEEEEcCCCcEEEEECC--CCceeeeeec
Confidence 666665 666555433 1112 2355667775 78888 9999999999999999997 4556666 56
Q ss_pred CCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC-------------------------CCCCeEEEEE
Q 037288 417 GHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF-------------------------SNSVPSAVCW 471 (513)
Q Consensus 417 ~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~-------------------------~~~~v~~v~~ 471 (513)
+|...|.. ++|+ ++++|++|+.|+.|++||+.+++++..+.. ....|..++|
T Consensus 239 ~h~~~v~~--~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 239 GHKHFVSS--ICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp CCSSCEEE--EEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred CCCCceEE--EEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 89998877 8888 999999999999999999999998888752 2356899999
Q ss_pred cCCCceEEeeC
Q 037288 472 RTQRSMGPQIE 482 (513)
Q Consensus 472 ~p~~~~~~t~~ 482 (513)
+|++.+++++.
T Consensus 316 ~~~~~~l~~~~ 326 (450)
T 2vdu_B 316 SKNLPFVAFFV 326 (450)
T ss_dssp CSSSSEEEEEE
T ss_pred eCCCCEEEEEE
Confidence 99976555554
No 110
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1e-22 Score=224.38 Aligned_cols=223 Identities=11% Similarity=0.019 Sum_probs=176.8
Q ss_pred EEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCC
Q 037288 250 HLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKR 328 (513)
Q Consensus 250 ~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 328 (513)
....+|...|++++|+|++++||+|+. +.|+|||..+.+....+.|...|.+++|+| |++|++++.|++|++||++++
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred ccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC
Confidence 345689999999999999999999965 569999999888777777888899999999 889999999999999999988
Q ss_pred ccccccccccccCcCeEEEeeCC---eEEEeE-------eecccCccccee----------EeecCCCceEEEEEcCC-C
Q 037288 329 QRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-------WFELKANIWPSH----------TTFMPSSISCLQSLQLY-D 387 (513)
Q Consensus 329 ~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~----------~~~~~~~v~~~~~~~~~-~ 387 (513)
+... .+. |...|++++|+| .+++|+ |+...+...... ...|...|.++ .|+|+ +
T Consensus 90 ~~~~---~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl-~~sp~~~ 164 (902)
T 2oaj_A 90 KVLT---TVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI-QWNPRDI 164 (902)
T ss_dssp SEEE---EEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE-EEETTEE
T ss_pred cEEE---EEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE-EEccCCC
Confidence 7533 443 778999999999 677776 998876642111 11245678886 66774 5
Q ss_pred CEEEEEecCCeEEEEecCCCCccceEEecCC------------------CCceeEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 037288 388 QYFLASSMDGTVKLYDHRLTTRGAVQSYEGH------------------VNSHTRIQLGVDQSERFVMSGGEDCKLRIWS 449 (513)
Q Consensus 388 ~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h------------------~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd 449 (513)
..|++|+.||.| +||++ ...++..+.+| ...|.. ++|+|+|++|++|+.||+|++||
T Consensus 165 ~~l~~g~~dg~v-lWd~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~--v~fspdg~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLV--ENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQ--SLYHPNSLHIITIHEDNSLVFWD 239 (902)
T ss_dssp EEEEEECSSCEE-EEETT--TTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEE--EEECTTSSEEEEEETTCCEEEEE
T ss_pred CEEEEEeCCCcE-EEECC--CCceEEEEecccCCcCCCcccccccccccCCCeEE--EEEcCCCCEEEEEECCCeEEEEE
Confidence 789999999999 99997 55577777766 355655 99999999999999999999999
Q ss_pred CCCCeEEEE--ec---C-------------CCCCeEEEEEc----CC-CceEEeeCC
Q 037288 450 IRSGELVFE--DK---F-------------SNSVPSAVCWR----TQ-RSMGPQIEG 483 (513)
Q Consensus 450 ~~~~~~~~~--~~---~-------------~~~~v~~v~~~----p~-~~~~~t~~~ 483 (513)
+++++++.. +. . +..+|++++|+ |+ ..++++++.
T Consensus 240 ~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~ 296 (902)
T 2oaj_A 240 ANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKS 296 (902)
T ss_dssp TTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEEC
T ss_pred CCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCC
Confidence 999998764 21 1 24479999995 44 356666643
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.91 E-value=2.5e-22 Score=203.80 Aligned_cols=215 Identities=16% Similarity=0.194 Sum_probs=177.3
Q ss_pred eccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCc
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQ 329 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 329 (513)
..+|...|.++++ ++.++++|+. +.|++||+.+++....+. |...|.+++| ++++|++|+.||.|++||+.+++
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 4567788999988 7889998864 569999999999887776 7888999998 78999999999999999999887
Q ss_pred cccccccccccCcCeEEEeeCC-eEEEeE-------eecccCcccce-e-EeecCCCceEEEEEcCCCCEEEEEecCCeE
Q 037288 330 RGCSSRAGRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPS-H-TTFMPSSISCLQSLQLYDQYFLASSMDGTV 399 (513)
Q Consensus 330 ~~~~~~~~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~-~-~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i 399 (513)
. +..+.+|...|.+++|++ .+++++ |+...+..... . ...+...+.++.. ++++|++|+.||.|
T Consensus 205 ~---~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i 278 (435)
T 1p22_A 205 M---LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTI 278 (435)
T ss_dssp E---EEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEE
T ss_pred E---EEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeE
Confidence 6 458889999999999999 777776 88877654422 2 2234556666533 78999999999999
Q ss_pred EEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEE
Q 037288 400 KLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGP 479 (513)
Q Consensus 400 ~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~ 479 (513)
++||++ ....+..+.+|...+.+ +.+ ++++|++|+.||.|++||+++++++..+..|...|.+++|. +.+++
T Consensus 279 ~vwd~~--~~~~~~~~~~~~~~v~~--~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~ 350 (435)
T 1p22_A 279 KVWNTS--TCEFVRTLNGHKRGIAC--LQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIV 350 (435)
T ss_dssp EEEETT--TCCEEEEEECCSSCEEE--EEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECC--SSEEE
T ss_pred EEEECC--cCcEEEEEcCCCCcEEE--EEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEec--CCEEE
Confidence 999997 55688899999999877 555 47899999999999999999999999999999999999994 34455
Q ss_pred eeCCC
Q 037288 480 QIEGK 484 (513)
Q Consensus 480 t~~~~ 484 (513)
+++.|
T Consensus 351 sg~~d 355 (435)
T 1p22_A 351 SGAYD 355 (435)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 44443
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=5.8e-23 Score=206.15 Aligned_cols=220 Identities=9% Similarity=0.052 Sum_probs=168.0
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCC-CEEEEEe-CCeEEEEECCCCcEEEEe--e-eC
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNP-SQAVIGT-NLGAAMVDMETGMASWVC--R-SK 296 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g-~~l~s~s-~~~i~vwd~~~~~~~~~~--~-~~ 296 (513)
.+|.+.+|++.+..... .....+..+.+|...|.+++|+|++ .+|++++ |+.|++||+.+++.+..+ . |.
T Consensus 102 ~dg~v~vw~~~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 176 (402)
T 2aq5_A 102 EDCTVMVWEIPDGGLVL-----PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHP 176 (402)
T ss_dssp TTSEEEEEECCTTCCSS-----CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCC
T ss_pred CCCeEEEEEccCCCCcc-----ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCC
Confidence 57889999987553221 1112356688999999999999998 6888876 556999999999988777 3 78
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccc-cccCcC-eEEEeeCC---eEEEe---E-------eecc
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAG-RRHRIP-YSRLQRND---RVTNE---Q-------WFEL 361 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~-v~~v~~~~---~~~s~---~-------w~~~ 361 (513)
..|.+++|+|++++|++|+.||.|++||+++++. +..+ .+|... +.++.|++ .++++ + |+..
T Consensus 177 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 177 DTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV---VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE---EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEeCCCCce---eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 8899999999999999999999999999998875 3366 678776 89999998 55555 2 8887
Q ss_pred cCcc-cceeEeecCCCceEEEEEcCCCCEEEE-EecCCeEEEEecCCCCccc-eEEecC--CCCceeEEEEEEcCCCCEE
Q 037288 362 KANI-WPSHTTFMPSSISCLQSLQLYDQYFLA-SSMDGTVKLYDHRLTTRGA-VQSYEG--HVNSHTRIQLGVDQSERFV 436 (513)
Q Consensus 362 ~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~s-~s~dg~i~lwd~~~~~~~~-~~~~~~--h~~~v~~~~~~~s~~g~~l 436 (513)
.... .....+.+...+.++ .++|++++|++ |+.||.|++||+. ...+ +..+.. |...+.. ++|+|++.++
T Consensus 254 ~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~g~~dg~i~i~d~~--~~~~~~~~l~~~~~~~~v~~--~~~sp~~~~~ 328 (402)
T 2aq5_A 254 HLEEPLSLQELDTSSGVLLP-FFDPDTNIVYLCGKGDSSIRYFEIT--SEAPFLHYLSMFSSKESQRG--MGYMPKRGLE 328 (402)
T ss_dssp BCSSCSEEEECCCCSSCEEE-EEETTTTEEEEEETTCSCEEEEEEC--SSTTCEEEEEEECCSSCCSE--EEECCGGGSC
T ss_pred cccCCceEEeccCCCceeEE-EEcCCCCEEEEEEcCCCeEEEEEec--CCCcceEeecccccCCcccc--eEEecccccc
Confidence 7654 223333455666665 78899999875 5579999999997 3332 444544 4577766 8999999887
Q ss_pred EEEeCCCcEEEEeCCCCeEE
Q 037288 437 MSGGEDCKLRIWSIRSGELV 456 (513)
Q Consensus 437 ~sg~~Dg~v~vwd~~~~~~~ 456 (513)
++ .|+.+++|++.++++.
T Consensus 329 ~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 329 VN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp GG--GTEEEEEEEEETTEEE
T ss_pred ee--cceeEEEEEcCCCcEE
Confidence 64 5679999999987643
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.91 E-value=1.8e-21 Score=197.96 Aligned_cols=232 Identities=15% Similarity=0.244 Sum_probs=186.9
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee-eCCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR-SKSD 298 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-~~~~ 298 (513)
..+|.+.+|++.+.. .+..+.+|...|++++|+ +.++++|+ |+.|++||+.+++.+..+. |...
T Consensus 136 ~~dg~i~vwd~~~~~------------~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~ 201 (445)
T 2ovr_B 136 SDDNTLKVWSAVTGK------------CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 201 (445)
T ss_dssp ETTSCEEEEETTTCC------------EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred ECCCcEEEEECCCCc------------EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCc
Confidence 357888888876432 346688999999999997 56788775 5569999999998877766 7788
Q ss_pred eEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC-eEEEeE-------eecccCcccceeE
Q 037288 299 ILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPSHT 370 (513)
Q Consensus 299 V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~~~ 370 (513)
|.+++|+ ++.|++|+.||.|++||+++++. +..+.+|..+|.+++|+. .+++++ |+...+... ..
T Consensus 202 v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~ 274 (445)
T 2ovr_B 202 VRCMHLH--EKRVVSGSRDATLRVWDIETGQC---LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL--HT 274 (445)
T ss_dssp EEEEEEE--TTEEEEEETTSEEEEEESSSCCE---EEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEE--EE
T ss_pred EEEEEec--CCEEEEEeCCCEEEEEECCCCcE---EEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEe--EE
Confidence 9999995 67899999999999999998876 447889999999999977 777776 888776533 23
Q ss_pred ee-cCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 037288 371 TF-MPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWS 449 (513)
Q Consensus 371 ~~-~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd 449 (513)
+. +...+.++.. ++.++++++.||.|++||++ ...++..+.+|...+.. +.+ ++++|++|+.||.|++||
T Consensus 275 ~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~v~~--~~~--~~~~l~~~~~dg~i~vwd 345 (445)
T 2ovr_B 275 LQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVE--TGNCIHTLTGHQSLTSG--MEL--KDNILVSGNADSTVKIWD 345 (445)
T ss_dssp ECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETT--TCCEEEEECCCCSCEEE--EEE--ETTEEEEEETTSCEEEEE
T ss_pred ecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECC--CCCEEEEEcCCcccEEE--EEE--eCCEEEEEeCCCeEEEEE
Confidence 33 4556666543 79999999999999999997 55688899999988765 444 578999999999999999
Q ss_pred CCCCeEEEEecC---CCCCeEEEEEcCCCceEEeeCCC
Q 037288 450 IRSGELVFEDKF---SNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 450 ~~~~~~~~~~~~---~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+.+++++..+.. |...|++++|+++ ++++++.|
T Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~s~~~d 381 (445)
T 2ovr_B 346 IKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDD 381 (445)
T ss_dssp TTTCCEEEEECSTTSCSSCEEEEEECSS--EEEEEETT
T ss_pred CCCCcEEEEEccCCCCCCCEEEEEECCC--EEEEEeCC
Confidence 999999999876 7888999999754 44444433
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=2.6e-22 Score=203.47 Aligned_cols=190 Identities=11% Similarity=0.110 Sum_probs=146.8
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcC-CCCEEEEEe-CCeEEEEECCCC---cEEEEe-e
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT-NPSQAVIGT-NLGAAMVDMETG---MASWVC-R 294 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~-~g~~l~s~s-~~~i~vwd~~~~---~~~~~~-~ 294 (513)
..+|.+.+|++......... ......+.+|...|.+++|+| ++.++++++ ++.|++||++++ .....+ .
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~-----~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRV-----IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGE-----EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eCCCeEEEEeCCCCCCCCce-----eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 35788889988753221000 011345778999999999999 677888876 556999999987 344444 5
Q ss_pred eCCCeEEEEEecCCc-EEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeec
Q 037288 295 SKSDILAQQVIHSGN-VVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFM 373 (513)
Q Consensus 295 ~~~~V~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~ 373 (513)
|...|.+++|+|++. +|++|+.||.|++||++.... . +..+.+|...|.+++|
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~-~~~~~~h~~~v~~i~~------------------------ 329 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-K-LHSFESHKDEIFQVQW------------------------ 329 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-C-SEEEECCSSCEEEEEE------------------------
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-C-eEEeecCCCCEEEEEE------------------------
Confidence 888899999999986 899999999999999997532 1 4567778888877554
Q ss_pred CCCceEEEEEcCCC-CEEEEEecCCeEEEEecCCCC------------ccceEEecCCCCceeEEEEEEcCCCC-EEEEE
Q 037288 374 PSSISCLQSLQLYD-QYFLASSMDGTVKLYDHRLTT------------RGAVQSYEGHVNSHTRIQLGVDQSER-FVMSG 439 (513)
Q Consensus 374 ~~~v~~~~~~~~~~-~~l~s~s~dg~i~lwd~~~~~------------~~~~~~~~~h~~~v~~~~~~~s~~g~-~l~sg 439 (513)
+|++ .+|++++.|+.|++||++... ...+..+.+|...+.. ++|+|++. +|+++
T Consensus 330 ----------sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~--~~~~p~~~~~l~s~ 397 (430)
T 2xyi_A 330 ----------SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISD--FSWNPNEPWIICSV 397 (430)
T ss_dssp ----------CSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEE--EEECSSSTTEEEEE
T ss_pred ----------CCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceE--EEECCCCCCEEEEE
Confidence 4566 579999999999999997311 1456777889988877 89999999 89999
Q ss_pred eCCCcEEEEeCCCC
Q 037288 440 GEDCKLRIWSIRSG 453 (513)
Q Consensus 440 ~~Dg~v~vwd~~~~ 453 (513)
+.||.|+||++...
T Consensus 398 s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 398 SEDNIMQVWQMAEN 411 (430)
T ss_dssp ETTSEEEEEEECHH
T ss_pred ECCCCEEEeEcccc
Confidence 99999999998654
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=3.9e-22 Score=190.05 Aligned_cols=162 Identities=8% Similarity=0.004 Sum_probs=122.1
Q ss_pred eEEeccccCcEEEEEEcC---CCCEEEEEe-CCeEEEEECCCCcEEEEee-eC---CCeEEEEEecCCcEE---------
Q 037288 249 MHLVASFKCTVWTADFCT---NPSQAVIGT-NLGAAMVDMETGMASWVCR-SK---SDILAQQVIHSGNVV--------- 311 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~---~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-~~---~~V~~l~~~~~~~~l--------- 311 (513)
+..+.+|...+..++|++ ++.+|++|+ |++|+|||+.+|+++..+. |+ ..|.+++|+|+|.++
T Consensus 171 ~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~ 250 (356)
T 2w18_A 171 KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK 250 (356)
T ss_dssp EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-----
T ss_pred eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc
Confidence 455778999999999999 779999986 5569999999999888886 33 357888999999876
Q ss_pred ---EEEeCCCeEEEEECCCCcccccccc---ccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC
Q 037288 312 ---LCGFRNGAIVTVDVRKRQRGCSSRA---GRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL 385 (513)
Q Consensus 312 ---~sg~~dg~i~iwd~~~~~~~~~~~~---~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~ 385 (513)
++|+.|++|++||..+++... +.. -.+|...+. ..+.
T Consensus 251 w~laSGs~D~tIklWd~~tgk~l~-v~~~~~p~Gh~~~~l------------------------------------sg~~ 293 (356)
T 2w18_A 251 ESESLRSPVFQLIVINPKTTLSVG-VMLYCLPPGQAGRFL------------------------------------EGDV 293 (356)
T ss_dssp -------CCEEEEEEETTTTEEEE-EEEECCCTTCCCCEE------------------------------------EEEE
T ss_pred ceeeccCCCcEEEEEECCCCEEEE-EEEeeccCCCcceeE------------------------------------cccc
Confidence 678899999999998876532 000 023332221 1122
Q ss_pred CCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 037288 386 YDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSI 450 (513)
Q Consensus 386 ~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~ 450 (513)
++.++++++.|++|+|||+. ...++.++.+|...+.. .++|+|||++|++|+.|++|+|||+
T Consensus 294 sg~~lASgS~DgTIkIWDl~--tGk~l~tL~gH~~~vvs-~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 294 KDHCAAAILTSGTIAIWDLL--LGQCTALLPPVSDQHWS-FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ETTEEEEEETTSCEEEEETT--TCSEEEEECCC--CCCC-EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEcCCCcEEEEECC--CCcEEEEecCCCCCeEE-EEEECCCCCEEEEEECCCcEEEecC
Confidence 37789999999999999997 56689999999876542 2789999999999999999999995
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=1.2e-21 Score=192.87 Aligned_cols=229 Identities=11% Similarity=0.097 Sum_probs=172.4
Q ss_pred ceeEEeccccCcEEEEEEcCC---CCEEEEEeC-CeEEEEECCC-CcEE-E-EeeeCCCeEEEEEecCCcEEEEEeCCCe
Q 037288 247 STMHLVASFKCTVWTADFCTN---PSQAVIGTN-LGAAMVDMET-GMAS-W-VCRSKSDILAQQVIHSGNVVLCGFRNGA 319 (513)
Q Consensus 247 ~~~~~~~~h~~~V~~~~~s~~---g~~l~s~s~-~~i~vwd~~~-~~~~-~-~~~~~~~V~~l~~~~~~~~l~sg~~dg~ 319 (513)
..+..+.+|...|++++|+|+ |.+|++|+. +.|++||+.+ +... . ...|...|.+++|+|++++|++|+.||.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 346678899999999999998 689998865 5699999997 5543 3 3348889999999999999999999999
Q ss_pred EEEEECCCCccccccccccccCcCeEEEee--CC---eEEEeE-------eecccCcccceeEeecCCCceEEEEEcCCC
Q 037288 320 IVTVDVRKRQRGCSSRAGRRHRIPYSRLQR--ND---RVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQLYD 387 (513)
Q Consensus 320 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~--~~---~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 387 (513)
|++||+++.+. ..+.+|..+|.+++| ++ .+++++ |+...++. ...+..+..+.++.. ..
T Consensus 110 v~iwd~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~---~~ 180 (368)
T 3mmy_A 110 AKMWDLSSNQA----IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP--MMVLQLPERCYCADV---IY 180 (368)
T ss_dssp EEEEETTTTEE----EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC--SEEEECSSCEEEEEE---ET
T ss_pred EEEEEcCCCCc----eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE--EEEEecCCCceEEEe---cC
Confidence 99999998764 346789999999999 66 577776 88887764 345555555555433 35
Q ss_pred CEEEEEecCCeEEEEecCCCCcc-ceEEe-cCCCCceeEEEEEEcCCC--CEEEEEeCCCcEEEEeCCCC---eEEEEec
Q 037288 388 QYFLASSMDGTVKLYDHRLTTRG-AVQSY-EGHVNSHTRIQLGVDQSE--RFVMSGGEDCKLRIWSIRSG---ELVFEDK 460 (513)
Q Consensus 388 ~~l~s~s~dg~i~lwd~~~~~~~-~~~~~-~~h~~~v~~~~~~~s~~g--~~l~sg~~Dg~v~vwd~~~~---~~~~~~~ 460 (513)
..+++++.++.+++||++ ... ....+ ..+.....++.+..+... ..+++|+.||.|++||+... +.+..+.
T Consensus 181 ~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLE--NQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK 258 (368)
T ss_dssp TEEEEEEGGGCEEEEECS--SSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE
T ss_pred CeeEEEeCCCcEEEEEec--cccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee
Confidence 688999999999999997 332 22222 223344445334433322 23999999999999999987 5666676
Q ss_pred CCCC------------CeEEEEEcCCCceEEeeCCCee
Q 037288 461 FSNS------------VPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 461 ~~~~------------~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
.|.. .|++++|+|++.++++++.|-.
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~ 296 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR 296 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC
T ss_pred eeecccccccccccccceEEEEEecCCCEEEEEccCCe
Confidence 6654 7999999999877777766543
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.90 E-value=9.4e-22 Score=187.43 Aligned_cols=198 Identities=10% Similarity=-0.049 Sum_probs=134.8
Q ss_pred ccccCcEEEEEEcCCCCEEEEEe---CCeEEEEEC-CCCcEEEEee-eCCCeEEEEEec---CCcEEEEEeCCCeEEEEE
Q 037288 253 ASFKCTVWTADFCTNPSQAVIGT---NLGAAMVDM-ETGMASWVCR-SKSDILAQQVIH---SGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 253 ~~h~~~V~~~~~s~~g~~l~s~s---~~~i~vwd~-~~~~~~~~~~-~~~~V~~l~~~~---~~~~l~sg~~dg~i~iwd 324 (513)
.+|...|+.+ ++++++.++. ++.|++|++ .+|+.+..+. |...+..++|++ ++.+|++|+.|++|+|||
T Consensus 133 ~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWD 209 (356)
T 2w18_A 133 SGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWN 209 (356)
T ss_dssp EEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEE
T ss_pred CCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEE
Confidence 4566667665 5777777764 777999999 4477655444 777799999999 679999999999999999
Q ss_pred CCCCccccccccccccCc---CeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCC-CCEEEEEecCCeEE
Q 037288 325 VRKRQRGCSSRAGRRHRI---PYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLY-DQYFLASSMDGTVK 400 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h~~---~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~s~dg~i~ 400 (513)
+.+++... ++.+|.. .+.+++|+| +....+....+. ...+++|+.|++|+
T Consensus 210 l~TGk~l~---tL~g~~~~v~~v~~vafSp-----------------------dG~~lvs~s~~~~~w~laSGs~D~tIk 263 (356)
T 2w18_A 210 LKTGQLLK---KMHIDDSYQASVCHKAYSE-----------------------MGLLFIVLSHPCAKESESLRSPVFQLI 263 (356)
T ss_dssp TTTCCEEE---EEECCC---CCCEEEEEEE-----------------------TTEEEEEEC------------CCEEEE
T ss_pred CCCCcEEE---EEcCCCcceeeeEEEEECC-----------------------CCCEEEEeccCCCcceeeccCCCcEEE
Confidence 99988643 5655433 344444433 011111111111 11357889999999
Q ss_pred EEecCCCCccceEEe-----cCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCC-eEEEEEcCC
Q 037288 401 LYDHRLTTRGAVQSY-----EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSV-PSAVCWRTQ 474 (513)
Q Consensus 401 lwd~~~~~~~~~~~~-----~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~-v~~v~~~p~ 474 (513)
+||.. ....+..+ .+|.... +..++ ++.++++|+.|++|+|||+.+++++.++.+|... +..++|+|+
T Consensus 264 lWd~~--tgk~l~v~~~~~p~Gh~~~~--lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPD 337 (356)
T 2w18_A 264 VINPK--TTLSVGVMLYCLPPGQAGRF--LEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGT 337 (356)
T ss_dssp EEETT--TTEEEEEEEECCCTTCCCCE--EEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSS
T ss_pred EEECC--CCEEEEEEEeeccCCCccee--Ecccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCC
Confidence 99986 44455444 4676653 22343 3889999999999999999999999999877654 456999999
Q ss_pred CceEEeeCCCe
Q 037288 475 RSMGPQIEGKI 485 (513)
Q Consensus 475 ~~~~~t~~~~~ 485 (513)
+.++++++.|-
T Consensus 338 G~~LaSGS~D~ 348 (356)
T 2w18_A 338 DSHLLAGQKDG 348 (356)
T ss_dssp SSEEEEECTTS
T ss_pred CCEEEEEECCC
Confidence 99999888774
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-21 Score=198.86 Aligned_cols=275 Identities=11% Similarity=0.030 Sum_probs=181.2
Q ss_pred eCCCCceeeeeEEeccccCeEEEEEeecccccc------cceeEEeeeccccccccccccccCCCCCccccCcce---ee
Q 037288 115 QTPEGQFRTDVLLTGSVNGFFSLFEVGNVGQHA------HDTVKFIPSCVWPRIKDNKTESSKAPEHIWRLNKAS---IL 185 (513)
Q Consensus 115 ~~~~g~~~~~~l~tg~~~G~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~---~~ 185 (513)
.+|+|+ ++++++.|++|+ +. +..+.. ...+.+.|+.. . -.-..|+.++.. +.
T Consensus 23 ~SpDG~----~iASas~D~TV~--d~-~~~~~l~gh~~~v~~V~FsPdg~---~---------~~~~~~~~~~~~~~~~~ 83 (588)
T 2j04_A 23 WARDGT----LYLTTFPDISIG--QP-KYAKDINCNSKNLFHVKEFPLEF---E---------NKLDFELAQQNGLLNSQ 83 (588)
T ss_dssp ECTTSC----EEEECSSSEEEE--EE-CCCSCCSSBGGGTEEEEEECCCC---C---------CTTTTSCCCSSCSSTTS
T ss_pred ECCCCC----EEEEEcCCceee--cc-cccceecCCCccEEEEEECCCCC---c---------ceEEEEeCCCceEeecC
Confidence 678876 599999999999 42 222211 11344444330 0 011122222111 11
Q ss_pred ecccceEEEecCCCCccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEeccccC-----cEE
Q 037288 186 MPSSVSCIKLFGKHPSCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKC-----TVW 260 (513)
Q Consensus 186 ~~s~i~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~V~ 260 (513)
..+.|.++.+++.....+ .+..+|.+.+|+... .+..+. |.. .|.
T Consensus 84 ~~~~V~~vawSPdG~~LA---------------s~s~dg~V~iwd~~~--------------~l~~l~-~~~~~~~~sv~ 133 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMA---------------VLSNNGNVSVFKDNK--------------MLTNLD-SKGNLSSRTYH 133 (588)
T ss_dssp CSCCEEEEEECSSSSCEE---------------EEETTSCEEEEETTE--------------EEEECC-CSSCSTTTCEE
T ss_pred CCCcEEEEEECCCCCEEE---------------EEeCCCcEEEEeCCc--------------eeeecc-CCCccccccEE
Confidence 245577777776553222 233567777777431 233344 554 599
Q ss_pred EEEEcCCCCEEEEEeC-CeEEEEECCCCc-------EEEEe-----eeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCC
Q 037288 261 TADFCTNPSQAVIGTN-LGAAMVDMETGM-------ASWVC-----RSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRK 327 (513)
Q Consensus 261 ~~~~s~~g~~l~s~s~-~~i~vwd~~~~~-------~~~~~-----~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 327 (513)
+++|||||++||+|++ ++|++||+.++. .+..+ .|.+.|.+++|+||| +++++.|++|++||+..
T Consensus 134 svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~ 211 (588)
T 2j04_A 134 CFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSA 211 (588)
T ss_dssp EEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCS
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCC
Confidence 9999999999999975 559999999885 24443 256789999999999 78888999999999987
Q ss_pred Cccccccccc-cccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCC
Q 037288 328 RQRGCSSRAG-RRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRL 406 (513)
Q Consensus 328 ~~~~~~~~~~-~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~ 406 (513)
.........+ .+|...|.+++ |+ ++.||+++ ++.|++||+.
T Consensus 212 ~~~~~~~~tL~~~h~~~V~sva----------------------------------Fs--g~~LASa~-~~tIkLWd~~- 253 (588)
T 2j04_A 212 SSHQPVSRMIQNASRRKITDLK----------------------------------IV--DYKVVLTC-PGYVHKIDLK- 253 (588)
T ss_dssp SSSCCCEEEEECCCSSCCCCEE----------------------------------EE--TTEEEEEC-SSEEEEEETT-
T ss_pred CccccceeeecccccCcEEEEE----------------------------------EE--CCEEEEEe-CCeEEEEECC-
Confidence 7632102234 36666666644 34 58899887 6999999985
Q ss_pred CCccceEEec-CCCCceeEEEEEE--cCCCCEEEEEeCCCcEEEEeCCCCe-----------------------EEEEec
Q 037288 407 TTRGAVQSYE-GHVNSHTRIQLGV--DQSERFVMSGGEDCKLRIWSIRSGE-----------------------LVFEDK 460 (513)
Q Consensus 407 ~~~~~~~~~~-~h~~~v~~~~~~~--s~~g~~l~sg~~Dg~v~vwd~~~~~-----------------------~~~~~~ 460 (513)
.+....+. +|.+.+.. +.| +|++..|+++++||+ ++|....-. .+..+.
T Consensus 254 --~~~~~~~~~gh~~~V~~--va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~ 328 (588)
T 2j04_A 254 --NYSISSLKTGSLENFHI--IPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE 328 (588)
T ss_dssp --TTEEEEEECSCCSCCCE--EEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC
T ss_pred --CCeEEEEEcCCCceEEE--EEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec
Confidence 44332333 89999888 899 999999999999999 999874211 111111
Q ss_pred CCCCCeEEEEEcCCCceEEeeCCC
Q 037288 461 FSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 461 ~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
. ...|.+++|+|++.++|+...=
T Consensus 329 ~-~~~I~~va~SPdG~~lA~~~~i 351 (588)
T 2j04_A 329 T-TLVIHGISLSPDGYSIAIVYDM 351 (588)
T ss_dssp C-EEEEEEEEECTTSSEEEEEEEE
T ss_pred c-ceEEEEEEECCCCCEEEEEEec
Confidence 1 2348999999999877766543
No 119
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=3e-20 Score=187.16 Aligned_cols=223 Identities=11% Similarity=0.040 Sum_probs=170.6
Q ss_pred ccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCC----eEEEEECCCCcEEEEeeeCCCe
Q 037288 224 GSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNL----GAAMVDMETGMASWVCRSKSDI 299 (513)
Q Consensus 224 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~----~i~vwd~~~~~~~~~~~~~~~V 299 (513)
+.+.+|++... ....+.+|...|.+++|+|+|+.|++++.+ .|++||+.+++...+..+...+
T Consensus 159 ~~i~i~d~~g~-------------~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~ 225 (415)
T 2hqs_A 159 YELRVSDYDGY-------------NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHN 225 (415)
T ss_dssp EEEEEEETTSC-------------SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCE
T ss_pred ceEEEEcCCCC-------------CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcc
Confidence 67777876521 134577899999999999999999987643 6999999999988777788889
Q ss_pred EEEEEecCCcEEE-EEeCCCe--EEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE----------eecccC
Q 037288 300 LAQQVIHSGNVVL-CGFRNGA--IVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ----------WFELKA 363 (513)
Q Consensus 300 ~~l~~~~~~~~l~-sg~~dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~----------w~~~~~ 363 (513)
.+++|+|||+.|+ +++.|+. |++||+.+++ ...+..|...+.++.|+| .++.++ |+...+
T Consensus 226 ~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 226 GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred cCEEEcCCCCEEEEEEecCCCceEEEEECCCCC----EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 9999999998776 6766654 9999998775 346778889999999999 455444 444444
Q ss_pred cccceeEee-cCCCceEEEEEcCCCCEEEEEecC---CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEE
Q 037288 364 NIWPSHTTF-MPSSISCLQSLQLYDQYFLASSMD---GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSG 439 (513)
Q Consensus 364 ~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~d---g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg 439 (513)
.. ..+. +...+.+ ..|+|+|++|++++.+ ..|++||+. .+....+..|. .+.. ++|+|+|++|+++
T Consensus 302 ~~---~~l~~~~~~~~~-~~~spdG~~l~~~~~~~g~~~i~~~d~~---~~~~~~l~~~~-~~~~--~~~spdg~~l~~~ 371 (415)
T 2hqs_A 302 AP---QRITWEGSQNQD-ADVSSDGKFMVMVSSNGGQQHIAKQDLA---TGGVQVLSSTF-LDET--PSLAPNGTMVIYS 371 (415)
T ss_dssp CC---EECCCSSSEEEE-EEECTTSSEEEEEEECSSCEEEEEEETT---TCCEEECCCSS-SCEE--EEECTTSSEEEEE
T ss_pred CE---EEEecCCCcccC-eEECCCCCEEEEEECcCCceEEEEEECC---CCCEEEecCCC-CcCC--eEEcCCCCEEEEE
Confidence 32 1222 2233333 5889999999988875 589999995 33345566664 4444 8999999999998
Q ss_pred eCCC---cEEEEeCCCCeEEEEecCCCCCeEEEEEcCC
Q 037288 440 GEDC---KLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ 474 (513)
Q Consensus 440 ~~Dg---~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~ 474 (513)
+.|+ .|++||+. +.....+..+.+.|.+++|+|.
T Consensus 372 s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 372 SSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp EEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCC
T ss_pred EcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccc
Confidence 8877 79999987 5556778888889999999998
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.88 E-value=6.1e-21 Score=188.23 Aligned_cols=205 Identities=9% Similarity=0.047 Sum_probs=146.1
Q ss_pred CccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCC-cEEEEeeeCCCeEE
Q 037288 223 GGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETG-MASWVCRSKSDILA 301 (513)
Q Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~-~~~~~~~~~~~V~~ 301 (513)
++.+.+|++.+... +..+ .|...|.+++++++ .++++.++.|++||+.++ +.+..+.. ....
T Consensus 80 d~~v~iWd~~~~~~------------~~~~-~~~~~v~~v~~~~~--~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~~ 142 (355)
T 3vu4_A 80 KEVVHIWDDVKKQD------------VSRI-KVDAPVKDLFLSRE--FIVVSYGDVISVFKFGNPWKRITDDIR--FGGV 142 (355)
T ss_dssp TTEEEEEETTTTEE------------EEEE-ECSSCEEEEEECSS--EEEEEETTEEEEEESSTTCCBSSCCEE--EEEE
T ss_pred ccEEEEEECCCCcE------------EEEE-ECCCceEEEEEcCC--EEEEEEcCEEEEEECCCCceeeEEecc--CCce
Confidence 45777887664322 2333 36679999999876 466677889999999988 54444443 4445
Q ss_pred EEEecCCcEEEE--EeCCCeEEEEECCCCcccc------------c-cccccccCcCeEEEeeCCeEEEeEeecccCccc
Q 037288 302 QQVIHSGNVVLC--GFRNGAIVTVDVRKRQRGC------------S-SRAGRRHRIPYSRLQRNDRVTNEQWFELKANIW 366 (513)
Q Consensus 302 l~~~~~~~~l~s--g~~dg~i~iwd~~~~~~~~------------~-~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~ 366 (513)
+++++ ..++. |+.||.|++||++++.... . +..+.+|..+|.++
T Consensus 143 ~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~------------------- 201 (355)
T 3vu4_A 143 CEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMV------------------- 201 (355)
T ss_dssp EEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEE-------------------
T ss_pred EEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEE-------------------
Confidence 56666 45555 6899999999998754100 0 33567777777774
Q ss_pred ceeEeecCCCceEEEEEcCCCCEEEEEecCCe-EEEEecCCCCccceEEec-C-CCCceeEEEEEEcCCCCEEEEEeCCC
Q 037288 367 PSHTTFMPSSISCLQSLQLYDQYFLASSMDGT-VKLYDHRLTTRGAVQSYE-G-HVNSHTRIQLGVDQSERFVMSGGEDC 443 (513)
Q Consensus 367 ~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~-i~lwd~~~~~~~~~~~~~-~-h~~~v~~~~~~~s~~g~~l~sg~~Dg 443 (513)
.|+|++++|++|+.|++ |++||++ ...++.++. + |...|.. ++|+|+|++|++|+.|+
T Consensus 202 ---------------~~s~~g~~l~s~s~d~~~v~iwd~~--~~~~~~~~~~g~h~~~v~~--~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 202 ---------------RLNRKSDMVATCSQDGTIIRVFKTE--DGVLVREFRRGLDRADVVD--MKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp ---------------EECTTSSEEEEEETTCSEEEEEETT--TCCEEEEEECTTCCSCEEE--EEECTTSCEEEEEETTC
T ss_pred ---------------EECCCCCEEEEEeCCCCEEEEEECC--CCcEEEEEEcCCCCCcEEE--EEECCCCCEEEEEECCC
Confidence 55679999999999998 9999997 556888887 5 9988877 89999999999999999
Q ss_pred cEEEEeCCCCeEE--EEe---------------------cCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 444 KLRIWSIRSGELV--FED---------------------KFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 444 ~v~vwd~~~~~~~--~~~---------------------~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+|++||+..+... ..+ .........++|++++..++....|
T Consensus 263 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 263 TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 9999999765311 111 0112234679999997666655544
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.7e-21 Score=211.41 Aligned_cols=217 Identities=12% Similarity=0.120 Sum_probs=170.2
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCC--CCEEEEEeC-CeEEEEECCCCc--EEEEe-ee
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTN--PSQAVIGTN-LGAAMVDMETGM--ASWVC-RS 295 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~--g~~l~s~s~-~~i~vwd~~~~~--~~~~~-~~ 295 (513)
.+|.+.+|++.... ...+..+.+|...|++++|+++ +.++++|+. +.|++||+.+++ ....+ .|
T Consensus 29 ~dg~I~vwd~~~~~----------~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h 98 (753)
T 3jro_A 29 SDKTIKIFEVEGET----------HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH 98 (753)
T ss_dssp TTTEEEEEEEETTE----------EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred CCCcEEEEecCCCC----------CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCC
Confidence 47888888876221 1235668899999999999987 899998865 559999999986 33333 38
Q ss_pred CCCeEEEEEecC--CcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC----------------eEEEeE
Q 037288 296 KSDILAQQVIHS--GNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND----------------RVTNEQ 357 (513)
Q Consensus 296 ~~~V~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~----------------~~~s~~ 357 (513)
...|.+++|+|+ ++++++|+.||.|++||++...... ...+.+|...|.++.|+| .+++++
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~-~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs 177 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG 177 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC-CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEE
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc-eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEE
Confidence 888999999999 9999999999999999999875544 456789999999999986 367776
Q ss_pred -------eecccCccc--ceeEe-ecCCCceEEEEEcCC---CCEEEEEecCCeEEEEecCCCCcc---ceEEecCCCCc
Q 037288 358 -------WFELKANIW--PSHTT-FMPSSISCLQSLQLY---DQYFLASSMDGTVKLYDHRLTTRG---AVQSYEGHVNS 421 (513)
Q Consensus 358 -------w~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~---~~~l~s~s~dg~i~lwd~~~~~~~---~~~~~~~h~~~ 421 (513)
|+...+... ....+ .|...+.++ .++|+ +++|++++.||.|++||++..... .+....+|...
T Consensus 178 ~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l-~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 256 (753)
T 3jro_A 178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV-AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDV 256 (753)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE-EECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSC
T ss_pred CCCeEEEEeccCCcccceeeeeecCCCCcEEEE-EeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCc
Confidence 888766432 22233 345566665 78888 899999999999999999743211 23334557888
Q ss_pred eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 037288 422 HTRIQLGVDQSERFVMSGGEDCKLRIWSIRS 452 (513)
Q Consensus 422 v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~ 452 (513)
+.. ++|+|+|++|++|+.||.|++|++.+
T Consensus 257 v~~--l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 257 LWR--ASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCC--EEECTTTCCEEEECSSSCEECCBCCS
T ss_pred eEE--EEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 777 89999999999999999999999984
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.88 E-value=1.4e-19 Score=180.42 Aligned_cols=206 Identities=5% Similarity=0.004 Sum_probs=154.9
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEE-eC-CeEEEEECCCCcEEEEeeeCCCe
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIG-TN-LGAAMVDMETGMASWVCRSKSDI 299 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~-s~-~~i~vwd~~~~~~~~~~~~~~~V 299 (513)
.++.+.+|++.+... +..+..+ ..+.+++|+|++++++++ ++ +.|++||+.+++.+..+.+...+
T Consensus 52 ~d~~i~v~d~~~~~~------------~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 118 (391)
T 1l0q_A 52 HSNDVSIIDTATNNV------------IATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSP 118 (391)
T ss_dssp GGTEEEEEETTTTEE------------EEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred CCCeEEEEECCCCeE------------EEEEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCc
Confidence 356777777653321 2333333 399999999999987644 44 67999999999988888888889
Q ss_pred EEEEEecCCcEE-EEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCce
Q 037288 300 LAQQVIHSGNVV-LCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSIS 378 (513)
Q Consensus 300 ~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~ 378 (513)
.+++|+|+++.| ++++.|+.|++||+.+++... .+..| ..+.
T Consensus 119 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~---~~~~~----------------------------------~~~~ 161 (391)
T 1l0q_A 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN---TVSVG----------------------------------RSPK 161 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE---EEECC----------------------------------SSEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE---EEecC----------------------------------CCcc
Confidence 999999999866 788889999999998876432 22222 2222
Q ss_pred EEEEEcCCCCEE-EEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEe---CCCcEEEEeCCCCe
Q 037288 379 CLQSLQLYDQYF-LASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGG---EDCKLRIWSIRSGE 454 (513)
Q Consensus 379 ~~~~~~~~~~~l-~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~---~Dg~v~vwd~~~~~ 454 (513)
+ +.++|++++| ++++.|+.|++||++ ....+..+. +...+.. ++|+|++++|++++ .|+.|++||+.+++
T Consensus 162 ~-~~~~~dg~~l~~~~~~~~~v~~~d~~--~~~~~~~~~-~~~~~~~--~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 162 G-IAVTPDGTKVYVANFDSMSISVIDTV--TNSVIDTVK-VEAAPSG--IAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp E-EEECTTSSEEEEEETTTTEEEEEETT--TTEEEEEEE-CSSEEEE--EEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred e-EEECCCCCEEEEEeCCCCEEEEEECC--CCeEEEEEe-cCCCccc--eEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 2 4678899877 567789999999997 444555555 4445544 89999999999888 68999999999999
Q ss_pred EEEEecCCCCCeEEEEEcCCCc-eEEeeCCC
Q 037288 455 LVFEDKFSNSVPSAVCWRTQRS-MGPQIEGK 484 (513)
Q Consensus 455 ~~~~~~~~~~~v~~v~~~p~~~-~~~t~~~~ 484 (513)
.+..+..+. .+.+++|+|++. ++++++.+
T Consensus 236 ~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d 265 (391)
T 1l0q_A 236 ITARIPVGP-DPAGIAVTPDGKKVYVALSFX 265 (391)
T ss_dssp EEEEEECCS-SEEEEEECTTSSEEEEEETTT
T ss_pred EEEEEecCC-CccEEEEccCCCEEEEEcCCC
Confidence 998887755 478999999965 54665544
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1e-21 Score=192.69 Aligned_cols=205 Identities=9% Similarity=0.018 Sum_probs=149.8
Q ss_pred cCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECC---------CCcE
Q 037288 220 ETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDME---------TGMA 289 (513)
Q Consensus 220 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~---------~~~~ 289 (513)
+..+|.+.+|++.+.... ..+. ...|.++.|+|+ +++++ |++|++|+.. +++.
T Consensus 54 g~~Dg~v~iwd~~~~~~~------------~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 54 RCEDGALHFTQLKDSKTI------------TTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp EEETTEEEEEEESSSSCE------------EEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred ECCCCcEEEEECCCCcEE------------EEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 346889999998754332 1122 456778888887 66664 5568998655 5554
Q ss_pred EEEee--eCCCeEEEEEec--CCcEEEEEeCCCeEEEEECCCCccccccccc-cccCcCeEEEeeCCeEEEeEeecccCc
Q 037288 290 SWVCR--SKSDILAQQVIH--SGNVVLCGFRNGAIVTVDVRKRQRGCSSRAG-RRHRIPYSRLQRNDRVTNEQWFELKAN 364 (513)
Q Consensus 290 ~~~~~--~~~~V~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~s~~w~~~~~~ 364 (513)
+..+. |...|.+++|+| ++++|++|+.||+|++||+++++... .. ..|...|.+
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~---~~~~~~~~~i~~------------------ 175 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYI---VHSAKSDVEYSS------------------ 175 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEE---EECCCSSCCCCE------------------
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEE---EEecCCCCceEE------------------
Confidence 44433 557799999999 99999999999999999999876522 22 122333444
Q ss_pred ccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccce-EEecC-CCCceeEEEEEEcCCCCEEEEEeCC
Q 037288 365 IWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAV-QSYEG-HVNSHTRIQLGVDQSERFVMSGGED 442 (513)
Q Consensus 365 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~-~~~~~-h~~~v~~~~~~~s~~g~~l~sg~~D 442 (513)
+.|+|++.+|++|+.||.|++||++ ....+ ..+.+ |...|.. ++|+|+|.+|++++ |
T Consensus 176 ----------------~~~~pdg~~lasg~~dg~i~iwd~~--~~~~~~~~~~~~h~~~v~~--l~fs~~g~~l~s~~-~ 234 (343)
T 3lrv_A 176 ----------------GVLHKDSLLLALYSPDGILDVYNLS--SPDQASSRFPVDEEAKIKE--VKFADNGYWMVVEC-D 234 (343)
T ss_dssp ----------------EEECTTSCEEEEECTTSCEEEEESS--CTTSCCEECCCCTTSCEEE--EEECTTSSEEEEEE-S
T ss_pred ----------------EEECCCCCEEEEEcCCCEEEEEECC--CCCCCccEEeccCCCCEEE--EEEeCCCCEEEEEe-C
Confidence 3667899999999999999999998 55555 78888 9999877 89999999999999 5
Q ss_pred CcEEEEeCCCCeEEEEecC---CCCCe--EEEEEcCCCceEEeeCC
Q 037288 443 CKLRIWSIRSGELVFEDKF---SNSVP--SAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 443 g~v~vwd~~~~~~~~~~~~---~~~~v--~~v~~~p~~~~~~t~~~ 483 (513)
+.|++||+++++.+..+.. +...+ .+++|+|++.++++++.
T Consensus 235 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 235 QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 5999999999887655432 33333 36999999888887443
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.87 E-value=2.9e-19 Score=180.69 Aligned_cols=240 Identities=8% Similarity=-0.030 Sum_probs=175.8
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee-eCCCe
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR-SKSDI 299 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-~~~~V 299 (513)
.++.+.+|++.+.... ... ....+.+|...|++++|++++.++++++ ++.|++||+.+++.+..+. +...+
T Consensus 142 ~~~~i~~~d~~~g~~~-~~~------~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~ 214 (433)
T 3bws_A 142 EDEGMDVLDINSGQTV-RLS------PPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWS 214 (433)
T ss_dssp TSSSEEEEETTTCCEE-EEC------CCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSE
T ss_pred CCCeEEEEECCCCeEe-eec------CcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCe
Confidence 3466888877643322 000 0112568899999999999999999885 4679999999998877776 66779
Q ss_pred EEEEEecCCcEEE-EEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE---------------eec
Q 037288 300 LAQQVIHSGNVVL-CGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ---------------WFE 360 (513)
Q Consensus 300 ~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~---------------w~~ 360 (513)
.+++|+|+++.++ +++.|+.|++||+++++... .+..+ ..+.+++|+| .+++++ |+.
T Consensus 215 ~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~---~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~ 290 (433)
T 3bws_A 215 KILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR---KTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSM 290 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE---ECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred eEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE---EecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEEC
Confidence 9999999998775 55589999999999876532 44443 4589999998 444433 666
Q ss_pred ccCcccceeEeecCCCceEEEEEcCCCCEE-EEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEE
Q 037288 361 LKANIWPSHTTFMPSSISCLQSLQLYDQYF-LASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSG 439 (513)
Q Consensus 361 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg 439 (513)
..++.. ..+.+...+.++ .++|+++.+ ++++.|+.|++||+. ....+..+. +...+.. ++|+|+|++|+++
T Consensus 291 ~~~~~~--~~~~~~~~~~~~-~~~~~g~~l~~~~~~~~~v~v~d~~--~~~~~~~~~-~~~~~~~--~~~s~dg~~l~~~ 362 (433)
T 3bws_A 291 DKEKLI--DTIGPPGNKRHI-VSGNTENKIYVSDMCCSKIEVYDLK--EKKVQKSIP-VFDKPNT--IALSPDGKYLYVS 362 (433)
T ss_dssp TTTEEE--EEEEEEECEEEE-EECSSTTEEEEEETTTTEEEEEETT--TTEEEEEEE-CSSSEEE--EEECTTSSEEEEE
T ss_pred CCCcEE--eeccCCCCcceE-EECCCCCEEEEEecCCCEEEEEECC--CCcEEEEec-CCCCCCe--EEEcCCCCEEEEE
Confidence 555432 233334455554 778898754 666889999999996 444666665 5555555 8999999999888
Q ss_pred eC---------------CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEee
Q 037288 440 GE---------------DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 440 ~~---------------Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~ 481 (513)
+. ||.|++||+.+++.+..+.. ...+.+++|+|++..++++
T Consensus 363 ~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 363 CRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp ECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEE
T ss_pred ecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEE
Confidence 77 57999999999999988876 4568999999997655544
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=9.3e-21 Score=189.59 Aligned_cols=259 Identities=9% Similarity=0.005 Sum_probs=157.3
Q ss_pred eeeeeEEeccccCeEEEEEeecccccccceeEEeeeccccccccccccccCCCCCccccCcceeeecccceEEEecCCCC
Q 037288 121 FRTDVLLTGSVNGFFSLFEVGNVGQHAHDTVKFIPSCVWPRIKDNKTESSKAPEHIWRLNKASILMPSSVSCIKLFGKHP 200 (513)
Q Consensus 121 ~~~~~l~tg~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~s~i~si~~~~~~~ 200 (513)
....+|++|+.|+.|+||++....... ... +.....+...++++.|+|.....
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~---~~~--------~~~~~gH~~~v~~v~~~p~~~~~---------------- 151 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIIT---QHV--------LGGKSGHHNFVNDIDIADVYSAD---------------- 151 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEE---EEE--------ECTTTSCSSCEEEEEEEEEECTT----------------
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccce---eee--------ecccCCCCCceEEEEEccccccc----------------
Confidence 345689999999999999985543110 000 00222233345566665531100
Q ss_pred ccccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCC-EEEEEe-CCe
Q 037288 201 SCATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPS-QAVIGT-NLG 278 (513)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~-~l~s~s-~~~ 278 (513)
.+...+.+ .++..++.+.+|++.+. ..+..+.+|...|.+++|+|++. +|++|+ |++
T Consensus 152 -----~~~d~~~l----as~s~D~tv~~Wd~~~~------------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~ 210 (393)
T 4gq1_A 152 -----NRLAEQVI----ASVGDDCTLIIWRLTDE------------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGN 210 (393)
T ss_dssp -----CSEEEEEE----EEEETTSEEEEEEEETT------------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred -----cCCCCCEE----EEEECCCeEEEEECCCC------------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCE
Confidence 00001121 12335778888877532 23456788999999999999875 788776 456
Q ss_pred EEEEECCCCcEEEEe--------------------------eeCCCeEEEEEe-cCCcEEEEEeCCCeEEEEECCCCccc
Q 037288 279 AAMVDMETGMASWVC--------------------------RSKSDILAQQVI-HSGNVVLCGFRNGAIVTVDVRKRQRG 331 (513)
Q Consensus 279 i~vwd~~~~~~~~~~--------------------------~~~~~V~~l~~~-~~~~~l~sg~~dg~i~iwd~~~~~~~ 331 (513)
|++||+.+++..... .|...|.++.|+ +++..|++++.|+++++||+...+.
T Consensus 211 v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~- 289 (393)
T 4gq1_A 211 IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND- 289 (393)
T ss_dssp EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------
T ss_pred EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC-
Confidence 999999987543221 245668899987 7999999999999999999988765
Q ss_pred cccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCC-CEEEEEecCCeEEEEecCCCCcc
Q 037288 332 CSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYD-QYFLASSMDGTVKLYDHRLTTRG 410 (513)
Q Consensus 332 ~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~s~dg~i~lwd~~~~~~~ 410 (513)
...+..|...+..+.+.+ ...............++++.+ .++++|+.||.|++||+. ...
T Consensus 290 --~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~--~~~ 350 (393)
T 4gq1_A 290 --YNEISDSTMKLGPKNLLP---------------NVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTY--EKD 350 (393)
T ss_dssp ----------------CCSC---------------SEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETT--CTT
T ss_pred --CceEeeecCccccEEEcc---------------ccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECC--CCc
Confidence 347778888887777755 112222222223333444444 456677889999999997 455
Q ss_pred ceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 037288 411 AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSI 450 (513)
Q Consensus 411 ~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~ 450 (513)
.+..+.+|...|.. ++|+|||++|++++.|| +.+|.+
T Consensus 351 ~~~~~~~~~~~V~s--vafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 351 SNSIPIQLGMPIVD--FCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CCEEEEECSSCEEE--EEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEEEecCCCCcEEE--EEEcCCCCEEEEEeCCC-eEEEEE
Confidence 77777788888876 99999999999999776 666654
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.83 E-value=1.8e-18 Score=174.86 Aligned_cols=207 Identities=10% Similarity=0.040 Sum_probs=158.6
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEE-EE-eCCeEEEEECCCCcEEEEeeeCCCe
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAV-IG-TNLGAAMVDMETGMASWVCRSKSDI 299 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~-s~-s~~~i~vwd~~~~~~~~~~~~~~~V 299 (513)
.+|.+.+|++.+.. .+..+..|...+.+++|+|++..++ ++ .++.|++||+.+++.+..+.....+
T Consensus 189 ~d~~v~~~d~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 256 (433)
T 3bws_A 189 QANAVHVFDLKTLA------------YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLP 256 (433)
T ss_dssp GGTEEEEEETTTCC------------EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEE
T ss_pred CCCEEEEEECCCce------------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCc
Confidence 45778888775322 2345668889999999999999775 45 3567999999999988888877779
Q ss_pred EEEEEecCCcEEEEEe--------CCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEe-E-------eec
Q 037288 300 LAQQVIHSGNVVLCGF--------RNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNE-Q-------WFE 360 (513)
Q Consensus 300 ~~l~~~~~~~~l~sg~--------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~-~-------w~~ 360 (513)
.+++|+|+++.|++++ .|+.|++||+++++.. ....|...+.+++|+| .++.. + |+.
T Consensus 257 ~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 257 RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI----DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE----EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE----eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 9999999999998888 4899999999987643 2345667889999998 34333 2 888
Q ss_pred ccCcccceeEeecCCCceEEEEEcCCCCEEEEEec---------------CCeEEEEecCCCCccceEEecCCCCceeEE
Q 037288 361 LKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM---------------DGTVKLYDHRLTTRGAVQSYEGHVNSHTRI 425 (513)
Q Consensus 361 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~---------------dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~ 425 (513)
..++.. ..+.+...+.++ .++|+++++++++. ||.|++||+. ....+..+..+. .+..
T Consensus 333 ~~~~~~--~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~--~~~~~~~~~~~~-~~~~- 405 (433)
T 3bws_A 333 KEKKVQ--KSIPVFDKPNTI-ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT--TDTVKEFWEAGN-QPTG- 405 (433)
T ss_dssp TTTEEE--EEEECSSSEEEE-EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT--TTEEEEEEECSS-SEEE-
T ss_pred CCCcEE--EEecCCCCCCeE-EEcCCCCEEEEEecCCCccccccccccccceEEEEEECC--CCcEEEEecCCC-CCce-
Confidence 766533 344555666664 78899999988876 5799999996 444666776543 4444
Q ss_pred EEEEcCCCCEEEEEeC-CCcEEEEeCCC
Q 037288 426 QLGVDQSERFVMSGGE-DCKLRIWSIRS 452 (513)
Q Consensus 426 ~~~~s~~g~~l~sg~~-Dg~v~vwd~~~ 452 (513)
++|+|+|++|++++. |+.|++|++..
T Consensus 406 -~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 406 -LDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp -EEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred -EEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 899999999998875 99999999864
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=3e-19 Score=180.75 Aligned_cols=185 Identities=8% Similarity=-0.062 Sum_probs=142.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCC-----------CcE-----EEEeeeCCCeEEEEEecCCcEEE----EEeC
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMET-----------GMA-----SWVCRSKSDILAQQVIHSGNVVL----CGFR 316 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~-----------~~~-----~~~~~~~~~V~~l~~~~~~~~l~----sg~~ 316 (513)
..++.+++++++.++++++.+++++|+... ... ...+.+...|.+++|+|+|++|+ +|+.
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 467899999999999999888899986431 011 12234566799999999999999 7888
Q ss_pred CCeEEEEECCCC--------ccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCC-C
Q 037288 317 NGAIVTVDVRKR--------QRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLY-D 387 (513)
Q Consensus 317 dg~i~iwd~~~~--------~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 387 (513)
|+.|++||+++. +....+..+.+|...|.+++| +|+ +
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~----------------------------------~p~~~ 162 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKW----------------------------------NPTVP 162 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEE----------------------------------CSSCT
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEE----------------------------------CCCCC
Confidence 999999998654 111113456678888887655 445 7
Q ss_pred CEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCC----
Q 037288 388 QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSN---- 463 (513)
Q Consensus 388 ~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~---- 463 (513)
++|++++.||+|++||++ ....+....+|...+.+ ++|+|+|++|++|+.||.|++||++ ++....+..+.
T Consensus 163 ~~las~s~Dg~v~iwD~~--~~~~~~~~~~~~~~v~~--v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~ 237 (434)
T 2oit_A 163 SMVAVCLADGSIAVLQVT--ETVKVCATLPSTVAVTS--VCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYES 237 (434)
T ss_dssp TEEEEEETTSCEEEEEES--SSEEEEEEECGGGCEEE--EEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCT
T ss_pred CEEEEEECCCeEEEEEcC--CCcceeeccCCCCceeE--EEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCC
Confidence 899999999999999997 44455566678888876 8999999999999999999999998 66666554332
Q ss_pred ---CCeEEEEEcCCCceEEe
Q 037288 464 ---SVPSAVCWRTQRSMGPQ 480 (513)
Q Consensus 464 ---~~v~~v~~~p~~~~~~t 480 (513)
..|.+++|+++..++++
T Consensus 238 ~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 238 DHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp TSCEEEEEEEEEETTEEEEE
T ss_pred CCceeEEEEEEecCceEEEE
Confidence 27899999999776643
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=1.2e-17 Score=166.46 Aligned_cols=204 Identities=10% Similarity=0.089 Sum_probs=154.1
Q ss_pred CCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEE-EEE-eCCeEEEEECCCCcEEEEeeeCCC
Q 037288 221 TTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQA-VIG-TNLGAAMVDMETGMASWVCRSKSD 298 (513)
Q Consensus 221 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l-~s~-s~~~i~vwd~~~~~~~~~~~~~~~ 298 (513)
..++.+.+|++.+.. .+..+..|. .+.+++|+|+++++ +++ .++.|++||+.+++.+..+.+...
T Consensus 9 ~~d~~v~v~d~~~~~------------~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 75 (391)
T 1l0q_A 9 SESDNISVIDVTSNK------------VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS 75 (391)
T ss_dssp TTTTEEEEEETTTTE------------EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred CCCCEEEEEECCCCe------------EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCC
Confidence 356788888876432 233455554 58999999999976 455 467799999999999888887779
Q ss_pred eEEEEEecCCcEEE-EEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCc
Q 037288 299 ILAQQVIHSGNVVL-CGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSI 377 (513)
Q Consensus 299 V~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v 377 (513)
+.+++|+|+++.|+ ++..|+.|++||+.+++... .+. ....+
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~---~~~----------------------------------~~~~~ 118 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG---TVK----------------------------------TGKSP 118 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE---EEE----------------------------------CSSSE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE---EEe----------------------------------CCCCc
Confidence 99999999998765 55567999999999876432 222 22223
Q ss_pred eEEEEEcCCCCEE-EEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeE
Q 037288 378 SCLQSLQLYDQYF-LASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFV-MSGGEDCKLRIWSIRSGEL 455 (513)
Q Consensus 378 ~~~~~~~~~~~~l-~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l-~sg~~Dg~v~vwd~~~~~~ 455 (513)
.+ +.+++++++| ++++.|+.|++||++ ....+..+..|.. +.. ++|+|++++| ++++.|+.|++||+.+++.
T Consensus 119 ~~-~~~s~dg~~l~~~~~~~~~v~~~d~~--~~~~~~~~~~~~~-~~~--~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 119 LG-LALSPDGKKLYVTNNGDKTVSVINTV--TKAVINTVSVGRS-PKG--IAVTPDGTKVYVANFDSMSISVIDTVTNSV 192 (391)
T ss_dssp EE-EEECTTSSEEEEEETTTTEEEEEETT--TTEEEEEEECCSS-EEE--EEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ce-EEECCCCCEEEEEeCCCCEEEEEECC--CCcEEEEEecCCC-cce--EEECCCCCEEEEEeCCCCEEEEEECCCCeE
Confidence 23 4677899877 677889999999997 4456777776654 344 8899999987 6778899999999999998
Q ss_pred EEEecCCCCCeEEEEEcCCCc-eEEee
Q 037288 456 VFEDKFSNSVPSAVCWRTQRS-MGPQI 481 (513)
Q Consensus 456 ~~~~~~~~~~v~~v~~~p~~~-~~~t~ 481 (513)
+..+.. ...+.+++|+|++. +++++
T Consensus 193 ~~~~~~-~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 193 IDTVKV-EAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp EEEEEC-SSEEEEEEECTTSSEEEEEE
T ss_pred EEEEec-CCCccceEECCCCCEEEEEe
Confidence 888765 45789999999965 44444
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=4e-18 Score=162.07 Aligned_cols=243 Identities=9% Similarity=-0.002 Sum_probs=170.1
Q ss_pred cCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCC-CcEEEEeee--C
Q 037288 220 ETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMET-GMASWVCRS--K 296 (513)
Q Consensus 220 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~-~~~~~~~~~--~ 296 (513)
+..++.+.+|++.+.. ...+..|...|.+++|+|+|++|++++++.|.+||+.+ ++....... .
T Consensus 18 ~~~~~~i~~~d~~~~~-------------~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 84 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRK-------------MRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT 84 (297)
T ss_dssp CCCCEEEEEEETTTTE-------------EEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC
T ss_pred CCcceeEEEEeCCCCc-------------eeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc
Confidence 3456777777765321 23466788999999999999999999999999999999 876665543 2
Q ss_pred CCeEEEEEecCCcEEEEEe--CCCeEEEE--ECCCCccccccccccccCcCeEEEeeCC---eEE-EeE-------eecc
Q 037288 297 SDILAQQVIHSGNVVLCGF--RNGAIVTV--DVRKRQRGCSSRAGRRHRIPYSRLQRND---RVT-NEQ-------WFEL 361 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~--~dg~i~iw--d~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~-s~~-------w~~~ 361 (513)
..+.+++|+|+++.|++++ .++.+.+| |+..... ..+..+. .+..+.|+| .++ ++. |+..
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP----RLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC----EECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce----EEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 5689999999999999998 33445555 5544432 2333333 488899998 344 443 5543
Q ss_pred cCcccceeEeecCCCceEEEEEcCCCCEEEEEe-cCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEe
Q 037288 362 KANIWPSHTTFMPSSISCLQSLQLYDQYFLASS-MDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGG 440 (513)
Q Consensus 362 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s-~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~ 440 (513)
...........+...+.+ ..++|++++|++++ .++.+++|+++. ....+..+..|...+.. ++|+|+|++|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~--~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 160 IDSGVETRLTHGEGRNDG-PDYSPDGRWIYFNSSRTGQMQIWRVRV-DGSSVERITDSAYGDWF--PHPSPSGDKVVFVS 235 (297)
T ss_dssp TTTCCEEECCCSSSCEEE-EEECTTSSEEEEEECTTSSCEEEEEET-TSSCEEECCCCSEEEEE--EEECTTSSEEEEEE
T ss_pred CCCCcceEcccCCCcccc-ceECCCCCEEEEEecCCCCccEEEECC-CCCCcEEEecCCcccCC--eEECCCCCEEEEEE
Confidence 222111222233444555 47899999888766 589999999852 23366777777765554 89999999999888
Q ss_pred CC-----------CcEEEEeCCCCeE--EEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 441 ED-----------CKLRIWSIRSGEL--VFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 441 ~D-----------g~v~vwd~~~~~~--~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
.+ +.|++||+.+++. +..+..|...+..++|+|++..+++.+.+
T Consensus 236 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 236 YDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp EETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred cCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 76 5699999998865 44444677789999999997665555443
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=4.3e-17 Score=176.61 Aligned_cols=240 Identities=10% Similarity=0.037 Sum_probs=166.5
Q ss_pred ccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCCC-----
Q 037288 224 GSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKSD----- 298 (513)
Q Consensus 224 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~----- 298 (513)
+.+.+|++.+.... ....+..|...+.+++|+|||++|++++++.|.+||+.+++...+......
T Consensus 129 ~~i~~~d~~~~~~~----------~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~g 198 (741)
T 2ecf_A 129 GELYLYDLKQEGKA----------AVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTTIGNG 198 (741)
T ss_dssp TEEEEEESSSCSTT----------SCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSSEEES
T ss_pred CcEEEEECCCCCcc----------eEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccceecc
Confidence 67777877644100 012256677889999999999999999999999999999887665543222
Q ss_pred ------------eEEEEEecCCcEEEEEeCCC---------------------------------eEEEEECCC-Ccccc
Q 037288 299 ------------ILAQQVIHSGNVVLCGFRNG---------------------------------AIVTVDVRK-RQRGC 332 (513)
Q Consensus 299 ------------V~~l~~~~~~~~l~sg~~dg---------------------------------~i~iwd~~~-~~~~~ 332 (513)
+.+++|+|||+.|++++.|+ .|.+||+.+ ++...
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 278 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQW 278 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEE
T ss_pred ccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEE
Confidence 47899999999998887776 889999987 65432
Q ss_pred ccccccccCcCeEEEeeCC---eEEEeE------------eecccCcccceeEeecCC---CceEEEEEcCCCCEEEEEe
Q 037288 333 SSRAGRRHRIPYSRLQRND---RVTNEQ------------WFELKANIWPSHTTFMPS---SISCLQSLQLYDQYFLASS 394 (513)
Q Consensus 333 ~~~~~~~h~~~v~~v~~~~---~~~s~~------------w~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~s 394 (513)
+.....|...+..++| | .++... |+...+............ .+.. ..|+|+|+++++++
T Consensus 279 -~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~-~~~spdg~~~~~~~ 355 (741)
T 2ecf_A 279 -IDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNS-LRFLDDGSILWSSE 355 (741)
T ss_dssp -ECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSC-CEECTTSCEEEEEC
T ss_pred -ecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCc-eEECCCCeEEEEec
Confidence 2222257888999999 9 344322 666655533222111111 1223 47899999989999
Q ss_pred cCCeEEEEecCCCCccceEEecCCCCceeEEEE-EEcCCCCEEEE-EeCCC--cEEEEeCCC-CeEEEEecCCCCCeEEE
Q 037288 395 MDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQL-GVDQSERFVMS-GGEDC--KLRIWSIRS-GELVFEDKFSNSVPSAV 469 (513)
Q Consensus 395 ~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~-~~s~~g~~l~s-g~~Dg--~v~vwd~~~-~~~~~~~~~~~~~v~~v 469 (513)
.||.++||.+.. ... ...+..|...+.. + .|+|+|+.|+. ++.|+ .++||++.. +..+..+.. ...+..+
T Consensus 356 ~~g~~~l~~~~~-~~~-~~~l~~~~~~v~~--~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~ 430 (741)
T 2ecf_A 356 RTGFQHLYRIDS-KGK-AAALTHGNWSVDE--LLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSA 430 (741)
T ss_dssp TTSSCEEEEECS-SSC-EEESCCSSSCEEE--EEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEE
T ss_pred CCCccEEEEEcC-CCC-eeeeeecceEEEe--EeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEE
Confidence 999888887752 233 6777777766654 4 59999997754 45555 899999864 555666655 5568899
Q ss_pred EEcCCCceEEee
Q 037288 470 CWRTQRSMGPQI 481 (513)
Q Consensus 470 ~~~p~~~~~~t~ 481 (513)
+|+|++..++..
T Consensus 431 ~~spdg~~l~~~ 442 (741)
T 2ecf_A 431 SFARNASVYVDS 442 (741)
T ss_dssp EECTTSSEEEEE
T ss_pred EECCCCCEEEEE
Confidence 999996554433
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.79 E-value=1.8e-17 Score=166.81 Aligned_cols=234 Identities=10% Similarity=-0.037 Sum_probs=167.5
Q ss_pred cEEEEec--CCCCCCCCCcccccCceeEEeccccCcEEEEEEcC--------------CCCEEEEE-eC------CeEEE
Q 037288 225 SIYALNL--DNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT--------------NPSQAVIG-TN------LGAAM 281 (513)
Q Consensus 225 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~--------------~g~~l~s~-s~------~~i~v 281 (513)
.+.+|++ .+.... .-..+.+|...+..+++++ .+..++.+ .+ +.|++
T Consensus 94 ~i~lwd~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i 163 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVL----------AQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRV 163 (415)
T ss_dssp EEEEEECSSSTTCEE----------EEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEE
T ss_pred EEEEEeCCCCCCCEE----------eeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEE
Confidence 6777887 543321 1134778888888777765 14555544 33 46999
Q ss_pred EECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCC---eEEEEECCCCccccccccccccCcCeEEEeeCC---eEE-
Q 037288 282 VDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNG---AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVT- 354 (513)
Q Consensus 282 wd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~- 354 (513)
||+..+....+..|...|.+++|+|||+.|++++.|+ .|++||+.+++. ..+..|...+.+++|+| .++
T Consensus 164 ~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~----~~l~~~~~~~~~~~~spdg~~la~ 239 (415)
T 2hqs_A 164 SDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV----RQVASFPRHNGAPAFSPDGSKLAF 239 (415)
T ss_dssp EETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE----EEEECCSSCEEEEEECTTSSEEEE
T ss_pred EcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE----EEeecCCCcccCEEEcCCCCEEEE
Confidence 9998777666677888999999999999999999885 999999998763 35667888999999999 344
Q ss_pred EeE---------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEec-CC--eEEEEecCCCCccceEEecCCCCce
Q 037288 355 NEQ---------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM-DG--TVKLYDHRLTTRGAVQSYEGHVNSH 422 (513)
Q Consensus 355 s~~---------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~-dg--~i~lwd~~~~~~~~~~~~~~h~~~v 422 (513)
+++ |+...+... ....+...+.+ ..|+|+|++|++++. ++ .|.+||+. .+....+..|...+
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~~--~l~~~~~~~~~-~~~spdg~~l~~~s~~~g~~~i~~~d~~---~~~~~~l~~~~~~~ 313 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQIR--QVTDGRSNNTE-PTWFPDSQNLAFTSDQAGRPQVYKVNIN---GGAPQRITWEGSQN 313 (415)
T ss_dssp EECTTSSCEEEEEETTTCCEE--ECCCCSSCEEE-EEECTTSSEEEEEECTTSSCEEEEEETT---SSCCEECCCSSSEE
T ss_pred EEecCCCceEEEEECCCCCEE--eCcCCCCcccc-eEECCCCCEEEEEECCCCCcEEEEEECC---CCCEEEEecCCCcc
Confidence 432 666655431 22223334444 588999999998886 45 67777875 33445566666655
Q ss_pred eEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeC
Q 037288 423 TRIQLGVDQSERFVMSGGED---CKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 423 ~~~~~~~s~~g~~l~sg~~D---g~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
.. ++|+|+|++|++++.+ ..|++||+.+++.. .+..+. .+.+++|+|++.+++..+
T Consensus 314 ~~--~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s 372 (415)
T 2hqs_A 314 QD--ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSS 372 (415)
T ss_dssp EE--EEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEE
T ss_pred cC--eEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEE
Confidence 44 8999999999988764 58999999998874 454444 799999999976554443
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.76 E-value=5.4e-16 Score=150.95 Aligned_cols=189 Identities=7% Similarity=0.048 Sum_probs=126.1
Q ss_pred cEEEEEEcCCCCEEEEEe--CCeEEEEECC---CCcEEEEeeeCCCeEEEEEecCCcEEEEEe-CCCeEEEEECCC-Ccc
Q 037288 258 TVWTADFCTNPSQAVIGT--NLGAAMVDME---TGMASWVCRSKSDILAQQVIHSGNVVLCGF-RNGAIVTVDVRK-RQR 330 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s--~~~i~vwd~~---~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~-~dg~i~iwd~~~-~~~ 330 (513)
.+..++|+|+++++++++ ++.|.+||+. +.+....+.....+.+++|+|+|+.|++++ .++.|.+||+.. ++.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 788999999999876654 4569999994 334445555566799999999998888777 899999999986 332
Q ss_pred ccccc--cccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe-cCCeEEEEecCCC
Q 037288 331 GCSSR--AGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS-MDGTVKLYDHRLT 407 (513)
Q Consensus 331 ~~~~~--~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s-~dg~i~lwd~~~~ 407 (513)
.. .. .+. ......+.. +.++|+++++++++ .++.|.+||+...
T Consensus 165 ~~-~~~~~~~--------------------------------~~~~~~~~~-~~~~pdg~~l~~~~~~~~~i~~~~~~~~ 210 (343)
T 1ri6_A 165 VA-QDPAEVT--------------------------------TVEGAGPRH-MVFHPNEQYAYCVNELNSSVDVWELKDP 210 (343)
T ss_dssp EE-EEEEEEE--------------------------------CSTTCCEEE-EEECTTSSEEEEEETTTTEEEEEESSCT
T ss_pred ee-ecccccc--------------------------------cCCCCCcce-EEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 11 00 000 001112223 46788999776555 7899999999521
Q ss_pred Ccc--ceEEec----CCCCceeEEEEEEcCCCCEEEE-EeCCCcEEEEeCC--C--CeEEEEecCCCCCeEEEEEcCCCc
Q 037288 408 TRG--AVQSYE----GHVNSHTRIQLGVDQSERFVMS-GGEDCKLRIWSIR--S--GELVFEDKFSNSVPSAVCWRTQRS 476 (513)
Q Consensus 408 ~~~--~~~~~~----~h~~~v~~~~~~~s~~g~~l~s-g~~Dg~v~vwd~~--~--~~~~~~~~~~~~~v~~v~~~p~~~ 476 (513)
... ....+. ++........++|+|+|++|++ +..|+.|.+||+. + .+.+..+..+.. +..++|+|++.
T Consensus 211 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~ 289 (343)
T 1ri6_A 211 HGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGK 289 (343)
T ss_dssp TSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSS
T ss_pred CCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCC
Confidence 221 122332 2222223345899999998874 4579999999998 3 345555555444 88999999975
Q ss_pred -eEEee
Q 037288 477 -MGPQI 481 (513)
Q Consensus 477 -~~~t~ 481 (513)
+++++
T Consensus 290 ~l~~~~ 295 (343)
T 1ri6_A 290 YLIAAG 295 (343)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 44444
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.74 E-value=9.6e-16 Score=159.32 Aligned_cols=238 Identities=8% Similarity=0.009 Sum_probs=171.3
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEec-cccCcEEEEEEcCCCCEEEEEe-CCeEEEEEC--CCCcEEEEeeeCC
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVA-SFKCTVWTADFCTNPSQAVIGT-NLGAAMVDM--ETGMASWVCRSKS 297 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~--~~~~~~~~~~~~~ 297 (513)
.++.+.+|+..+... +..+. +|. +..++|+|+|++|++++ ++.|.+||+ .+++.+..+.+..
T Consensus 157 ~d~~V~v~D~~t~~~------------~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~ 222 (543)
T 1nir_A 157 DAGQIALVDGDSKKI------------VKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI 222 (543)
T ss_dssp GGTEEEEEETTTCCE------------EEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS
T ss_pred CCCeEEEEECCCceE------------EEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC
Confidence 467787787653322 33444 333 89999999999998775 566999999 8888888888777
Q ss_pred CeEEEEEec----CCcEEEEEeC-CCeEEEEECCCCccccccccccc----------cCc-CeEEEeeCC---eEEEeE-
Q 037288 298 DILAQQVIH----SGNVVLCGFR-NGAIVTVDVRKRQRGCSSRAGRR----------HRI-PYSRLQRND---RVTNEQ- 357 (513)
Q Consensus 298 ~V~~l~~~~----~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~----------h~~-~v~~v~~~~---~~~s~~- 357 (513)
.+..++|+| ||++|++++. +++|.+||..+.+... .+.. |.. .+.++.+++ .++...
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~---~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQ---IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEE---EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccce---eecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 799999999 9999999885 8999999998877543 3322 323 688899887 333322
Q ss_pred -------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe-cCCeEEEEecCCCCccceEEecC----CCCceeEE
Q 037288 358 -------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS-MDGTVKLYDHRLTTRGAVQSYEG----HVNSHTRI 425 (513)
Q Consensus 358 -------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s-~dg~i~lwd~~~~~~~~~~~~~~----h~~~v~~~ 425 (513)
|+...........+.+...+.. ..|+|++++|++++ .+++|.+||+. +..++..+.. |.+....
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~-~~~spdg~~l~va~~~~~~v~v~D~~--tg~l~~~i~~g~~ph~g~g~~- 375 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHD-GGWDSSHRYFMTAANNSNKVAVIDSK--DRRLSALVDVGKTPHPGRGAN- 375 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCSSCCC-EEECTTSCEEEEEEGGGTEEEEEETT--TTEEEEEEECSSSBCCTTCEE-
T ss_pred CCCeEEEEEecCCCcceeEEeccCcCccC-ceECCCCCEEEEEecCCCeEEEEECC--CCeEEEeeccCCCCCCCCCcc-
Confidence 6665544332224444344444 47899999877665 58999999997 4456666664 5443322
Q ss_pred EEEEcCC-CCEEEEEe-CCCcEEEEeCCC-------CeEEEEecCCCCCeEEEEEcCCCceEEeeC
Q 037288 426 QLGVDQS-ERFVMSGG-EDCKLRIWSIRS-------GELVFEDKFSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 426 ~~~~s~~-g~~l~sg~-~Dg~v~vwd~~~-------~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
+ ++|+ +..++++. .|++|.+||+.+ +++++++..+...+..++++|++..+..+.
T Consensus 376 -~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 376 -F-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp -E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred -c-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 3 4787 55566665 589999999998 899999999888888999999976655543
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.74 E-value=6.1e-16 Score=160.81 Aligned_cols=239 Identities=8% Similarity=-0.007 Sum_probs=171.1
Q ss_pred ccEEEEecC--CCCCCCCCcccccCceeEEeccccCcEEEEEEcC----CCCEEEEEe--CCeEEEEECCCCcEEEEeee
Q 037288 224 GSIYALNLD--NPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT----NPSQAVIGT--NLGAAMVDMETGMASWVCRS 295 (513)
Q Consensus 224 g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~----~g~~l~s~s--~~~i~vwd~~~~~~~~~~~~ 295 (513)
+.+.+|++. +. ..+..+. +...+..++|+| +|+++++++ +++|.+||..+++++..+..
T Consensus 200 ~~V~v~D~~~~t~------------~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 200 ARIDMIDLWAKEP------------TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp SEEEEEETTSSSC------------EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred CeEEEEECcCCCC------------cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc
Confidence 778888873 21 1233344 445789999999 999988775 67899999999998777652
Q ss_pred -----------CC-CeEEEEEecCC-cEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE--
Q 037288 296 -----------KS-DILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-- 357 (513)
Q Consensus 296 -----------~~-~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-- 357 (513)
.. .+.++.++|++ .++++...++.|.+||+.+.+... +..+ .+...+..+.|+| .++++.
T Consensus 267 ~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i-~~~~~~~~~~~spdg~~l~va~~~ 344 (543)
T 1nir_A 267 RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSI-GAAPFLHDGGWDSSHRYFMTAANN 344 (543)
T ss_dssp CEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEE-ECCSSCCCEEECTTSCEEEEEEGG
T ss_pred cCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEe-ccCcCccCceECCCCCEEEEEecC
Confidence 23 68999999977 567777889999999998765432 2222 3556678899998 355443
Q ss_pred ------eecccCcccceeEe---ecCCCceEEEEEcCC-CCEEEEEe-cCCeEEEEecCCCC-----ccceEEecCCCCc
Q 037288 358 ------WFELKANIWPSHTT---FMPSSISCLQSLQLY-DQYFLASS-MDGTVKLYDHRLTT-----RGAVQSYEGHVNS 421 (513)
Q Consensus 358 ------w~~~~~~~~~~~~~---~~~~~v~~~~~~~~~-~~~l~s~s-~dg~i~lwd~~~~~-----~~~~~~~~~h~~~ 421 (513)
||..++++...... .|+..... +++|+ +..++++. .|++|.+||+.... .++++++.+|.+.
T Consensus 345 ~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~--~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~ 422 (543)
T 1nir_A 345 SNKVAVIDSKDRRLSALVDVGKTPHPGRGAN--FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG 422 (543)
T ss_dssp GTEEEEEETTTTEEEEEEECSSSBCCTTCEE--EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC
T ss_pred CCeEEEEECCCCeEEEeeccCCCCCCCCCcc--cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC
Confidence 88888775433221 13333333 35666 66677765 58999999997311 4588999999877
Q ss_pred eeEEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCCeEE-EEe--------cCCCCCeEEEEEcCCCceEEee
Q 037288 422 HTRIQLGVDQSERFVMSGG-------EDCKLRIWSIRSGELV-FED--------KFSNSVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 422 v~~~~~~~s~~g~~l~sg~-------~Dg~v~vwd~~~~~~~-~~~--------~~~~~~v~~v~~~p~~~~~~t~ 481 (513)
+.. +.++|++++|++++ .+++|.|||+.+++.. ..+ ..+...+..++|+|++..+..+
T Consensus 423 ~~~--v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s 496 (543)
T 1nir_A 423 SLF--IKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFS 496 (543)
T ss_dssp CCC--EECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEE
T ss_pred ceE--EEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEE
Confidence 655 88999999999987 2789999999999877 443 3446679999999996554433
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.72 E-value=6.8e-16 Score=166.22 Aligned_cols=238 Identities=10% Similarity=-0.017 Sum_probs=164.6
Q ss_pred ccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCC-----CcEEEEeee-CC
Q 037288 224 GSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMET-----GMASWVCRS-KS 297 (513)
Q Consensus 224 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~-----~~~~~~~~~-~~ 297 (513)
+.+.+|++.+.. ...+..+...+.+++|+|||+.|+++.++.|.+||+.+ ++...+... ..
T Consensus 101 ~~i~~~d~~~~~-------------~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~ 167 (706)
T 2z3z_A 101 GGLVGFDMLARK-------------VTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTE 167 (706)
T ss_dssp TEEEEEETTTTE-------------EEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBT
T ss_pred CEEEEEECCCCc-------------eEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCC
Confidence 677777765321 22345566778899999999999998888999999998 776554442 22
Q ss_pred C--------------eEEEEEecCCcEEEEEe---------------------------------CCCeEEEEECCCCcc
Q 037288 298 D--------------ILAQQVIHSGNVVLCGF---------------------------------RNGAIVTVDVRKRQR 330 (513)
Q Consensus 298 ~--------------V~~l~~~~~~~~l~sg~---------------------------------~dg~i~iwd~~~~~~ 330 (513)
. +.+++|+|||+.|++++ .+..|++||+.+++.
T Consensus 168 ~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~ 247 (706)
T 2z3z_A 168 TLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT 247 (706)
T ss_dssp TEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE
T ss_pred CeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce
Confidence 2 48999999999999887 457899999988764
Q ss_pred ccccccccccCcCeEEEeeCC---eEEEeE------------eecccC-cccceeEeecCCC---ceEEEEEcC--CCCE
Q 037288 331 GCSSRAGRRHRIPYSRLQRND---RVTNEQ------------WFELKA-NIWPSHTTFMPSS---ISCLQSLQL--YDQY 389 (513)
Q Consensus 331 ~~~~~~~~~h~~~v~~v~~~~---~~~s~~------------w~~~~~-~~~~~~~~~~~~~---v~~~~~~~~--~~~~ 389 (513)
.. +.....|...+.+++|+| .++.++ |+...+ ............. +.. ..|+| +|++
T Consensus 248 ~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~-~~~sp~~dg~~ 325 (706)
T 2z3z_A 248 VY-LQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP-LTFLPGSNNQF 325 (706)
T ss_dssp EE-CCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC-CEECTTCSSEE
T ss_pred Ee-eccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC-ceeecCCCCEE
Confidence 33 222335778899999999 355432 666555 2221111111111 122 37889 9999
Q ss_pred EEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeC-CC----cEEEEeCCCCeEEEEecCCCC
Q 037288 390 FLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE-DC----KLRIWSIRSGELVFEDKFSNS 464 (513)
Q Consensus 390 l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~-Dg----~v~vwd~~~~~~~~~~~~~~~ 464 (513)
+++++.|+.++||++.. ..+.+..+..|...+.. .++|+|+|+.|+.++. ++ .|+.||+.+++ +..+. +..
T Consensus 326 l~~~~~~g~~~l~~~~~-~~~~~~~l~~~~~~v~~-~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~ 401 (706)
T 2z3z_A 326 IWQSRRDGWNHLYLYDT-TGRLIRQVTKGEWEVTN-FAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PES 401 (706)
T ss_dssp EEEECTTSSCEEEEEET-TSCEEEECCCSSSCEEE-EEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSS
T ss_pred EEEEccCCccEEEEEEC-CCCEEEecCCCCeEEEe-eeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCC
Confidence 99999999999998751 23467777777665532 1689999998866554 44 67778887776 33444 456
Q ss_pred CeEEEEEcCCCceEEe
Q 037288 465 VPSAVCWRTQRSMGPQ 480 (513)
Q Consensus 465 ~v~~v~~~p~~~~~~t 480 (513)
.+..++|+|++..++.
T Consensus 402 ~~~~~~~spdg~~l~~ 417 (706)
T 2z3z_A 402 GMHRTQLSPDGSAIID 417 (706)
T ss_dssp SEEEEEECTTSSEEEE
T ss_pred ceEEEEECCCCCEEEE
Confidence 6899999999755443
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.72 E-value=7.7e-16 Score=166.18 Aligned_cols=242 Identities=8% Similarity=-0.038 Sum_probs=156.8
Q ss_pred CccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeee-CCCe--
Q 037288 223 GGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRS-KSDI-- 299 (513)
Q Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~-~~~V-- 299 (513)
.+.+.+|++.+.... .+....+|...+..++|+|||+.||+++++.|++||+.+++...+... ...+
T Consensus 90 ~~~i~~~d~~~~~~~----------~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~ 159 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQ----------SLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIY 159 (723)
T ss_dssp CSEEEEEESSSCCCE----------ECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEE
T ss_pred eeeEEEEECCCCceE----------eccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceE
Confidence 467778887654321 011123455668899999999999999998999999999886665542 3333
Q ss_pred ----------------EEEEEecCCcEEEEEeCCC----------------------------------eEEEEECCCCc
Q 037288 300 ----------------LAQQVIHSGNVVLCGFRNG----------------------------------AIVTVDVRKRQ 329 (513)
Q Consensus 300 ----------------~~l~~~~~~~~l~sg~~dg----------------------------------~i~iwd~~~~~ 329 (513)
.+++|+|||+.|+.++.|+ .|++||+.+++
T Consensus 160 ~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~ 239 (723)
T 1xfd_A 160 NGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT 239 (723)
T ss_dssp EEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC
T ss_pred CcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc
Confidence 7899999999998887653 89999998776
Q ss_pred cccccccccc------cCcCeEEEeeCC--e-EEEeE-----------eecccCcccceeEeecCCCce---EEEEEcCC
Q 037288 330 RGCSSRAGRR------HRIPYSRLQRND--R-VTNEQ-----------WFELKANIWPSHTTFMPSSIS---CLQSLQLY 386 (513)
Q Consensus 330 ~~~~~~~~~~------h~~~v~~v~~~~--~-~~s~~-----------w~~~~~~~~~~~~~~~~~~v~---~~~~~~~~ 386 (513)
... .+.. +...+..++|+| . ++... |+...++........+...+. ....|+|+
T Consensus 240 ~~~---~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spd 316 (723)
T 1xfd_A 240 HDL---EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD 316 (723)
T ss_dssp CCE---ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTT
T ss_pred eeE---EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCC
Confidence 422 3333 367889999999 3 32321 666666543222222222221 12478999
Q ss_pred CCEEEE--EecCC------eEEEEecCCCCccc---eEEecCCCCceeEEEEEEcCCCCEEEEEeCC---CcEEEEeCCC
Q 037288 387 DQYFLA--SSMDG------TVKLYDHRLTTRGA---VQSYEGHVNSHTRIQLGVDQSERFVMSGGED---CKLRIWSIRS 452 (513)
Q Consensus 387 ~~~l~s--~s~dg------~i~lwd~~~~~~~~---~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D---g~v~vwd~~~ 452 (513)
|+.|+. +..++ .|.+||+. ..+. ...+..+...+.. .++|+|||+.|+..+.+ +.++||++..
T Consensus 317 g~~l~~~~~~~~~~~~~~~~l~~~d~~--~~~~~~~~~~l~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 317 GRKFFFIRAIPQGGRGKFYHITVSSSQ--PNSSNDNIQSITSGDWDVTK-ILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp SCSEEEEEEECCSSSSCEEEEEEECSS--CCSSSCCCCBSCCSSSCEEE-EEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred CCeEEEEEecccCCCcceeEEEEEecc--CCCCccceeEeecCCeEEEe-eeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 997775 44567 46667732 2223 4555533333322 26899999999766655 7899999864
Q ss_pred C--eEEEEecC---CCCCeEEEEEcCCCceEEe
Q 037288 453 G--ELVFEDKF---SNSVPSAVCWRTQRSMGPQ 480 (513)
Q Consensus 453 ~--~~~~~~~~---~~~~v~~v~~~p~~~~~~t 480 (513)
. .....+.. +...+..++|+|++..++.
T Consensus 394 ~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 394 VGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp STTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred CCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 3 23333432 4566889999999654443
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.71 E-value=2.7e-14 Score=139.66 Aligned_cols=187 Identities=10% Similarity=0.013 Sum_probs=138.7
Q ss_pred EEEEEEcCCCCEEEEEe---CCeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccccc
Q 037288 259 VWTADFCTNPSQAVIGT---NLGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSS 334 (513)
Q Consensus 259 V~~~~~s~~g~~l~s~s---~~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 334 (513)
+.+++|+|+|+.++++. ++.|.+||+.+++....+. +...+.+++|+|+|+.|++++.++.|.+||+.+++....+
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 78999999999777654 4569999999999888877 5556899999999999999999999999999887643200
Q ss_pred cc-ccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEec-CCeEEEEecCCCCccce
Q 037288 335 RA-GRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM-DGTVKLYDHRLTTRGAV 412 (513)
Q Consensus 335 ~~-~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~-dg~i~lwd~~~~~~~~~ 412 (513)
.. ..++...+. . +.++|+++++++++. ++.|.+||+. ....+
T Consensus 223 ~~~~~~~~~~~~---------------------------------~-~~~s~dg~~l~~~~~~~~~v~~~d~~--~~~~~ 266 (353)
T 3vgz_A 223 KLLDDGKEHFFI---------------------------------N-ISLDTARQRAFITDSKAAEVLVVDTR--NGNIL 266 (353)
T ss_dssp ECCCSSSCCCEE---------------------------------E-EEEETTTTEEEEEESSSSEEEEEETT--TCCEE
T ss_pred EcCCCCCCcccc---------------------------------e-EEECCCCCEEEEEeCCCCEEEEEECC--CCcEE
Confidence 00 001111122 2 467889997776665 5999999996 44456
Q ss_pred EEecCCCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCc-eEEeeCCCee
Q 037288 413 QSYEGHVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRS-MGPQIEGKIH 486 (513)
Q Consensus 413 ~~~~~h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~-~~~t~~~~~~ 486 (513)
..+..+.. .. ++|+|+|++++.++ .++.|.+||+.+++.+..+... ..+..++|+|++. ++++...+..
T Consensus 267 ~~~~~~~~--~~--~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~ 337 (353)
T 3vgz_A 267 AKVAAPES--LA--VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQKST 337 (353)
T ss_dssp EEEECSSC--CC--EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECCCB
T ss_pred EEEEcCCC--ce--EEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccccc
Confidence 66654332 23 78999999766555 6899999999999999887764 4689999999964 6666665433
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.71 E-value=5.3e-15 Score=143.52 Aligned_cols=188 Identities=10% Similarity=-0.018 Sum_probs=133.4
Q ss_pred cEEEEEEcCCCCEEEEEe-------------CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEE
Q 037288 258 TVWTADFCTNPSQAVIGT-------------NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s-------------~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd 324 (513)
.+.+++|+|+|++++++. ++.|.+||+.+++....+.....+.+++|+|+|+.|+++ ++.|.+||
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d 160 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMD 160 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEE
Confidence 567899999999888773 577999999999888777766678999999999988877 68999999
Q ss_pred CCCCccccccccccccC--cCeEEEeeCC---eEE-------------------------------EeEeecccCcccce
Q 037288 325 VRKRQRGCSSRAGRRHR--IPYSRLQRND---RVT-------------------------------NEQWFELKANIWPS 368 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h~--~~v~~v~~~~---~~~-------------------------------s~~w~~~~~~~~~~ 368 (513)
+.+++... .+..+. .++ .|+| .++ ...|+...++.. .
T Consensus 161 ~~~~~~~~---~~~~~~~~~~~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~ 233 (337)
T 1pby_B 161 PEAGTLVE---DKPIQSWEAET---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-M 233 (337)
T ss_dssp TTTTEEEE---EECSTTTTTTT---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-E
T ss_pred CCCCcEee---eeeccccCCCc---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-E
Confidence 98876432 222221 111 3333 010 112555554433 1
Q ss_pred eEe-ecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEE
Q 037288 369 HTT-FMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRI 447 (513)
Q Consensus 369 ~~~-~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~v 447 (513)
... .+...+.+ +.++|++++++++ ++.|.+||+. ....+..+..+. .+.. ++|+|+|++|++++.|+.|++
T Consensus 234 ~~~~~~~~~~~~-~~~s~dg~~l~~~--~~~v~~~d~~--~~~~~~~~~~~~-~~~~--~~~s~dg~~l~~~~~~~~i~v 305 (337)
T 1pby_B 234 REVRIMDVFYFS-TAVNPAKTRAFGA--YNVLESFDLE--KNASIKRVPLPH-SYYS--VNVSTDGSTVWLGGALGDLAA 305 (337)
T ss_dssp EEEEECSSCEEE-EEECTTSSEEEEE--ESEEEEEETT--TTEEEEEEECSS-CCCE--EEECTTSCEEEEESBSSEEEE
T ss_pred eecCCCCCceee-EEECCCCCEEEEe--CCeEEEEECC--CCcCcceecCCC-ceee--EEECCCCCEEEEEcCCCcEEE
Confidence 112 12223334 5789999999888 6899999996 444556665433 3344 889999999999999999999
Q ss_pred EeCCCCeEEEEecCC
Q 037288 448 WSIRSGELVFEDKFS 462 (513)
Q Consensus 448 wd~~~~~~~~~~~~~ 462 (513)
||+.+++.+..+..+
T Consensus 306 ~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 306 YDAETLEKKGQVDLP 320 (337)
T ss_dssp EETTTCCEEEEEECG
T ss_pred EECcCCcEEEEEEcC
Confidence 999999998887654
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=5.2e-15 Score=143.60 Aligned_cols=213 Identities=7% Similarity=-0.016 Sum_probs=142.2
Q ss_pred CccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCC----eEEEEECCCCcEEEEeeeCCC
Q 037288 223 GGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNL----GAAMVDMETGMASWVCRSKSD 298 (513)
Q Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~----~i~vwd~~~~~~~~~~~~~~~ 298 (513)
++.+.++++.+... ....+..+..+..+++|+|+|++++++.++ .|.+||+.+++.+..+.....
T Consensus 61 ~~~i~~~d~~~~~~-----------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 129 (331)
T 3u4y_A 61 CQTLVQIETQLEPP-----------KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD 129 (331)
T ss_dssp TCEEEEEECSSSSC-----------EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT
T ss_pred CCeEEEEECCCCce-----------eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC
Confidence 44666676654322 023345555666669999999988866554 799999999998888877777
Q ss_pred eEEEEEecCCcE-EEEEeCCCe-EEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCC
Q 037288 299 ILAQQVIHSGNV-VLCGFRNGA-IVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSS 376 (513)
Q Consensus 299 V~~l~~~~~~~~-l~sg~~dg~-i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~ 376 (513)
..+++|+|+|+. ++++..++. |.+|++....... ... ...+.....
T Consensus 130 ~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~---~~~-----------------------------~~~~~~~~~ 177 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF---DTG-----------------------------QEFISGGTR 177 (331)
T ss_dssp EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE---EEE-----------------------------EEEECSSSS
T ss_pred ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe---ecC-----------------------------CccccCCCC
Confidence 899999999974 455556688 9999998543211 000 001111222
Q ss_pred ceEEEEEcCCCCEEEEEe-cCCeEEEEecCCCCccc---eEEecCCCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCC
Q 037288 377 ISCLQSLQLYDQYFLASS-MDGTVKLYDHRLTTRGA---VQSYEGHVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIR 451 (513)
Q Consensus 377 v~~~~~~~~~~~~l~s~s-~dg~i~lwd~~~~~~~~---~~~~~~h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~ 451 (513)
... ..++|+++++++++ .++.|.+||+. .... +..+..+. .+.. ++|+|+|++|+.++ .++.|.+||+.
T Consensus 178 ~~~-~~~spdg~~l~v~~~~~~~v~v~d~~--~~~~~~~~~~~~~~~-~~~~--~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 178 PFN-ITFTPDGNFAFVANLIGNSIGILETQ--NPENITLLNAVGTNN-LPGT--IVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp EEE-EEECTTSSEEEEEETTTTEEEEEECS--STTSCEEEEEEECSS-CCCC--EEECTTSSEEEEECSSEEEEEEEETT
T ss_pred ccc-eEECCCCCEEEEEeCCCCeEEEEECC--CCcccceeeeccCCC-CCce--EEECCCCCEEEEEEcCCCEEEEEECC
Confidence 233 47889999665554 68999999996 3445 66666443 3344 88999999876655 47889999999
Q ss_pred CCeE--EEEecCC----CC---CeEEEEEcCCCc-eEEeeCCC
Q 037288 452 SGEL--VFEDKFS----NS---VPSAVCWRTQRS-MGPQIEGK 484 (513)
Q Consensus 452 ~~~~--~~~~~~~----~~---~v~~v~~~p~~~-~~~t~~~~ 484 (513)
+++. +..+..+ .. ....++|+|++. +++++..+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 252 SGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp TTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred CCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC
Confidence 9987 4443322 22 235689999965 44555544
No 140
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.70 E-value=7.2e-16 Score=173.26 Aligned_cols=183 Identities=11% Similarity=0.044 Sum_probs=147.7
Q ss_pred cccCcEEEEEEc-CCCCEEEEEeCCeEEEEECCCCcEEEEeeeCC-CeEEEEEecCCcEEEEEeCCCeEE-EEECCCCcc
Q 037288 254 SFKCTVWTADFC-TNPSQAVIGTNLGAAMVDMETGMASWVCRSKS-DILAQQVIHSGNVVLCGFRNGAIV-TVDVRKRQR 330 (513)
Q Consensus 254 ~h~~~V~~~~~s-~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~-~V~~l~~~~~~~~l~sg~~dg~i~-iwd~~~~~~ 330 (513)
.|...+.+++|+ |+|+.+++++++.+.+|++.++....+..+.. .+.+++|+ ||+.|+.++.++.+. +||+..+..
T Consensus 293 ~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~ 371 (1045)
T 1k32_A 293 ISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA 371 (1045)
T ss_dssp EECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE
T ss_pred ccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc
Confidence 356689999999 99999999888889999999888766556777 79999999 999999988888898 999887653
Q ss_pred ccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCcc
Q 037288 331 GCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRG 410 (513)
Q Consensus 331 ~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~ 410 (513)
. .+.+|...+.. ..|+|+|++|++++.++.|++||+. ...
T Consensus 372 ~----~l~~~~~~~~~----------------------------------~~~SpDG~~la~~~~~~~v~~~d~~--tg~ 411 (1045)
T 1k32_A 372 E----KFEENLGNVFA----------------------------------MGVDRNGKFAVVANDRFEIMTVDLE--TGK 411 (1045)
T ss_dssp E----ECCCCCCSEEE----------------------------------EEECTTSSEEEEEETTSEEEEEETT--TCC
T ss_pred e----EecCCccceee----------------------------------eEECCCCCEEEEECCCCeEEEEECC--CCc
Confidence 2 33355555554 4667899999999999999999996 334
Q ss_pred ceEEecCCCCceeEEEEEEcCCCCEEEEEeCCC----------cEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEe
Q 037288 411 AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDC----------KLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQ 480 (513)
Q Consensus 411 ~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg----------~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t 480 (513)
....+.+|...+.. ++|+|||++|++++.++ .|++||+.+++ +..+..+...+..++|+|++..++.
T Consensus 412 ~~~~~~~~~~~v~~--~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 412 PTVIERSREAMITD--FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp EEEEEECSSSCCCC--EEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEE
T ss_pred eEEeccCCCCCccc--eEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEE
Confidence 55555678887766 89999999999887654 89999999988 6667777778899999999754443
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.70 E-value=1.1e-15 Score=160.87 Aligned_cols=173 Identities=10% Similarity=-0.039 Sum_probs=131.9
Q ss_pred EEEEcCCCC--EEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCC----CeEEEEECCCCcccccc
Q 037288 261 TADFCTNPS--QAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRN----GAIVTVDVRKRQRGCSS 334 (513)
Q Consensus 261 ~~~~s~~g~--~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~ 334 (513)
..+|+|+|+ .++++.++.+.+||+.+++...+..+.. .+++|+|||+.|++++.| +.|++||+.+++.
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~---- 187 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL---- 187 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC----
T ss_pred eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc----
Confidence 557777775 5556667777799999998777776655 899999999999988877 7899999987763
Q ss_pred ccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCC--eEEEEecCCCCccce
Q 037288 335 RAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDG--TVKLYDHRLTTRGAV 412 (513)
Q Consensus 335 ~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg--~i~lwd~~~~~~~~~ 412 (513)
..+..|...+.. ..|+|||+.|+++..++ .|++||+. .....
T Consensus 188 ~~l~~~~~~~~~----------------------------------~~~SpDG~~l~~~~~~~~~~i~~~d~~--~~~~~ 231 (582)
T 3o4h_A 188 RVFDSGEGSFSS----------------------------------ASISPGMKVTAGLETAREARLVTVDPR--DGSVE 231 (582)
T ss_dssp EEECCSSCEEEE----------------------------------EEECTTSCEEEEEECSSCEEEEEECTT--TCCEE
T ss_pred eEeecCCCcccc----------------------------------ceECCCCCEEEEccCCCeeEEEEEcCC--CCcEE
Confidence 345556555544 46788999999888888 89999986 33344
Q ss_pred EEecCCCCceeEEEEE--------EcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 413 QSYEGHVNSHTRIQLG--------VDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 413 ~~~~~h~~~v~~~~~~--------~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
.+.+|...+.. +. |+|||.++++++.|+.+++|++ ++.+. .....+.+++|+ ++.++++.+.+
T Consensus 232 -~~~~~~~~~~~--~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 232 -DLELPSKDFSS--YRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp -ECCCSCSHHHH--HCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEET
T ss_pred -EccCCCcChhh--hhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCC
Confidence 67777766544 45 9999999999999999999999 77654 234568899999 76666655443
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.69 E-value=2.8e-14 Score=139.64 Aligned_cols=230 Identities=7% Similarity=-0.005 Sum_probs=148.3
Q ss_pred ccccCcEEEEEEcCCCCEEEEEe---CCeEEEEECCCCcEEE--E-eeeCCCeEEEEEecCCcEEEEEe-CCCeEEEEEC
Q 037288 253 ASFKCTVWTADFCTNPSQAVIGT---NLGAAMVDMETGMASW--V-CRSKSDILAQQVIHSGNVVLCGF-RNGAIVTVDV 325 (513)
Q Consensus 253 ~~h~~~V~~~~~s~~g~~l~s~s---~~~i~vwd~~~~~~~~--~-~~~~~~V~~l~~~~~~~~l~sg~-~dg~i~iwd~ 325 (513)
..+...+..++|+|+|++++++. ++.|.+||+.++.... . ..+...+..++|+|+|+.|++++ .++.|.+||+
T Consensus 36 ~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 34556778899999999444444 3569999998776322 2 23667789999999999888887 6899999999
Q ss_pred CCCccccccccccc---------cCcCeEEEeeCC--eEEEeE--------eecc-cCcccceeEeec--CCCceEEEEE
Q 037288 326 RKRQRGCSSRAGRR---------HRIPYSRLQRND--RVTNEQ--------WFEL-KANIWPSHTTFM--PSSISCLQSL 383 (513)
Q Consensus 326 ~~~~~~~~~~~~~~---------h~~~v~~v~~~~--~~~s~~--------w~~~-~~~~~~~~~~~~--~~~v~~~~~~ 383 (513)
........+..+.. +...+.+++|+| .++... |+.. .+.+.....+.. ...... +.|
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~-~~~ 194 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH-LVF 194 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE-EEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce-EEE
Confidence 64322110222211 123478899998 444433 7776 343332222222 223444 588
Q ss_pred cCCCCEEEE-EecCCeEEEEecCCCCcc--ceEEecCCCCc----eeEEEEEEcCCCCEE-EEEeCCCcEEEEeCC---C
Q 037288 384 QLYDQYFLA-SSMDGTVKLYDHRLTTRG--AVQSYEGHVNS----HTRIQLGVDQSERFV-MSGGEDCKLRIWSIR---S 452 (513)
Q Consensus 384 ~~~~~~l~s-~s~dg~i~lwd~~~~~~~--~~~~~~~h~~~----v~~~~~~~s~~g~~l-~sg~~Dg~v~vwd~~---~ 452 (513)
+|+|+++++ +..++.|.+|++...... .+..+...... .....++|+|+|++| +++..++.|.+|++. .
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH 274 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc
Confidence 999996665 456899999998621111 23333333221 123448999999987 455668999999997 2
Q ss_pred CeEEEEecCCCCCeEEEEEcCCCc-eEEeeCC
Q 037288 453 GELVFEDKFSNSVPSAVCWRTQRS-MGPQIEG 483 (513)
Q Consensus 453 ~~~~~~~~~~~~~v~~v~~~p~~~-~~~t~~~ 483 (513)
.+.+..+..+...+..++|+|++. ++++...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 275 LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EEEEEEEECSSSCCCEEEECTTSSEEEEEETT
T ss_pred EEEeEEEecCCCCcCeEEECCCCCEEEEEEcC
Confidence 355666666666789999999975 4444433
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.68 E-value=6.2e-15 Score=159.57 Aligned_cols=215 Identities=6% Similarity=-0.088 Sum_probs=148.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCeEEEEECCCC---cEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccccc
Q 037288 258 TVWTADFCTNPSQAVIGTNLGAAMVDMETG---MASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSS 334 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~---~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 334 (513)
.|.+++|+|||++|++++++.|.+||+.++ ....+..+...+.+++|+|||+.|+.++ ++.|++||+.+++...
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~-- 186 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ-- 186 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE--
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE--
Confidence 478999999999999998888999999988 6655556777899999999999998887 5699999998875432
Q ss_pred ccccccCcC----------------eEEEeeCC---eEEEeEee------------------------------------
Q 037288 335 RAGRRHRIP----------------YSRLQRND---RVTNEQWF------------------------------------ 359 (513)
Q Consensus 335 ~~~~~h~~~----------------v~~v~~~~---~~~s~~w~------------------------------------ 359 (513)
....+... +.++.|+| .++.++.+
T Consensus 187 -~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 187 -LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp -CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred -eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 22223222 47789998 45555432
Q ss_pred ----ccc-CcccceeEe-ecCCCceEEEEEcCCCCEEEEEec-----CCeEEEEecCCCCccceEEecCCCC----ceeE
Q 037288 360 ----ELK-ANIWPSHTT-FMPSSISCLQSLQLYDQYFLASSM-----DGTVKLYDHRLTTRGAVQSYEGHVN----SHTR 424 (513)
Q Consensus 360 ----~~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~s~-----dg~i~lwd~~~~~~~~~~~~~~h~~----~v~~ 424 (513)
... +........ .+...+.. ..| |+|++|++++. +..|++||+. .......+..+.. .+..
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~--~g~~~~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLAR-VNW-RDPQHLSFQRQSRDQKKLDLVEVTLA--SNQQRVLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEE-EEE-EETTEEEEEEEETTSSEEEEEEEETT--TCCEEEEEEEECSSCCCCCSC
T ss_pred EEEECCCCCceEEecCCCCcceEEEE-EEe-CCCCEEEEEEecccCCeEEEEEEECC--CCceEEEEEcCCCCcCCcCCc
Confidence 222 221100000 11223344 466 89999997764 5679999996 3344444444432 2233
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEEEecCCCCCeEEE-EEcCCCc-eEEeeCC
Q 037288 425 IQLGVDQSERFVMSGGEDCKLRIWSIR-SGELVFEDKFSNSVPSAV-CWRTQRS-MGPQIEG 483 (513)
Q Consensus 425 ~~~~~s~~g~~l~sg~~Dg~v~vwd~~-~~~~~~~~~~~~~~v~~v-~~~p~~~-~~~t~~~ 483 (513)
++|+|||+++++++.||.++||.+. +++ ...+..+...+..+ .|+|++. +++++..
T Consensus 342 --~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~ 400 (741)
T 2ecf_A 342 --LRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGI 400 (741)
T ss_dssp --CEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECS
T ss_pred --eEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeC
Confidence 7899999999999999988888765 445 67777777778887 5999964 4444443
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.68 E-value=7e-15 Score=139.43 Aligned_cols=199 Identities=9% Similarity=0.010 Sum_probs=146.6
Q ss_pred CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCC-Ccccccccccccc-CcCeEEEeeCC--
Q 037288 276 NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRK-RQRGCSSRAGRRH-RIPYSRLQRND-- 351 (513)
Q Consensus 276 ~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~h-~~~v~~v~~~~-- 351 (513)
++.|++||+.+++...+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++... ....| ...+.++.|+|
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEK---VDTGFATICNNDHGISPDG 96 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEE---CCCTTCCCBCSCCEECTTS
T ss_pred ceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceE---eccccccccccceEECCCC
Confidence 4559999999999888888999999999999999999986 88999999988 65432 34444 46788999998
Q ss_pred -eEEEeE---------eecccCcccceeEeecCCCceEEEEEcCCCCEEE-EEecCCeEEEEecCCCCccceEEecCCCC
Q 037288 352 -RVTNEQ---------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFL-ASSMDGTVKLYDHRLTTRGAVQSYEGHVN 420 (513)
Q Consensus 352 -~~~s~~---------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~s~dg~i~lwd~~~~~~~~~~~~~~h~~ 420 (513)
.++.+. |........ ...+.....+.. ..++|++++|+ +++.|+.+++|+++. .......+..|..
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~-~~~spdg~~l~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYW-HGWSPDGKSFTYCGIRDQVFDIYSMDI-DSGVETRLTHGEG 173 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEE-EEECTTSSEEEEEEEETTEEEEEEEET-TTCCEEECCCSSS
T ss_pred CEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccc-eEECCCCCEEEEEECCCCceEEEEEEC-CCCcceEcccCCC
Confidence 444443 333221111 223333334444 47899999887 778899999999752 2335566777777
Q ss_pred ceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCeEEEEecCCCCCeEEEEEcCCCceEEeeCC
Q 037288 421 SHTRIQLGVDQSERFVMSGG-EDCKLRIWSIR-SGELVFEDKFSNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 421 ~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~-~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
.+.. +.|+|+|++|+.++ .|+.+++|++. .+..+..+..+...+..++|+|++..++....
T Consensus 174 ~~~~--~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 174 RNDG--PDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp CEEE--EEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred cccc--ceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 7765 89999999888766 59999999986 56666777777778999999999765554443
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.66 E-value=1.8e-13 Score=133.74 Aligned_cols=205 Identities=9% Similarity=0.024 Sum_probs=133.0
Q ss_pred EeccccCcEEEEEEcCCCCEEEEEe--CCeEEEEECC-CCcE--EEEeeeC----------CCeEEEEEecCCcEEEEEe
Q 037288 251 LVASFKCTVWTADFCTNPSQAVIGT--NLGAAMVDME-TGMA--SWVCRSK----------SDILAQQVIHSGNVVLCGF 315 (513)
Q Consensus 251 ~~~~h~~~V~~~~~s~~g~~l~s~s--~~~i~vwd~~-~~~~--~~~~~~~----------~~V~~l~~~~~~~~l~sg~ 315 (513)
.+..+...+..++|+|+|++|++++ ++.+.+|++. ++.. +....+. ..+.+++|+|+|+++++..
T Consensus 80 ~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 80 TVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp EEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred eeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 3455677889999999999888765 4569999995 3332 2222221 2388999999999777777
Q ss_pred CCCeEEEEECC-CCcccccccccccc-CcCeEEEeeCC---eEEEeE--------eeccc--CcccceeEeec-CC----
Q 037288 316 RNGAIVTVDVR-KRQRGCSSRAGRRH-RIPYSRLQRND---RVTNEQ--------WFELK--ANIWPSHTTFM-PS---- 375 (513)
Q Consensus 316 ~dg~i~iwd~~-~~~~~~~~~~~~~h-~~~v~~v~~~~---~~~s~~--------w~~~~--~~~~~~~~~~~-~~---- 375 (513)
.++.|.+||+. .++... ...+..+ ...+..++|+| .++... |+... +.......+.. +.
T Consensus 160 ~~~~v~~~~~~~~g~~~~-~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 160 GSDKVYVYNVSDAGQLSE-QSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp TTTEEEEEEECTTSCEEE-EEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred CCCEEEEEEECCCCcEEE-eeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 78999999998 333221 2222222 23577899998 344432 66553 33322222221 21
Q ss_pred -CceEEEEEcCCCCEEE-EEecCCeEEEEecCCC-CccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC-CcEEEE--e
Q 037288 376 -SISCLQSLQLYDQYFL-ASSMDGTVKLYDHRLT-TRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED-CKLRIW--S 449 (513)
Q Consensus 376 -~v~~~~~~~~~~~~l~-s~s~dg~i~lwd~~~~-~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-g~v~vw--d 449 (513)
....-+.++|+|++|+ +...++.|.+||+... ....+..+..+...+.. ++|+|+|++|++++.+ +.|.+| |
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~--~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRD--FDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCE--EEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCe--EEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 1233358899999875 5556899999998621 11245555555555555 8899999999888765 899999 6
Q ss_pred CCCCeEEEE
Q 037288 450 IRSGELVFE 458 (513)
Q Consensus 450 ~~~~~~~~~ 458 (513)
..++++...
T Consensus 317 ~~tg~l~~~ 325 (347)
T 3hfq_A 317 LTSGKLSLL 325 (347)
T ss_dssp TTTCCEEEE
T ss_pred CCCCeEEec
Confidence 667776543
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.65 E-value=1.1e-15 Score=154.50 Aligned_cols=160 Identities=9% Similarity=0.037 Sum_probs=118.5
Q ss_pred cccCcEEEEEEcCCCCEEE----EEe-CCeEEEEECCCC--------cE---EEEee-eCCCeEEEEEecC-CcEEEEEe
Q 037288 254 SFKCTVWTADFCTNPSQAV----IGT-NLGAAMVDMETG--------MA---SWVCR-SKSDILAQQVIHS-GNVVLCGF 315 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~----s~s-~~~i~vwd~~~~--------~~---~~~~~-~~~~V~~l~~~~~-~~~l~sg~ 315 (513)
.|...|.+++|+|+|++|+ +|+ |+.|+|||+.++ +. ...+. |...|.+++|+|+ +++|++|+
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4667899999999999999 565 445999998754 21 22222 7788999999998 79999999
Q ss_pred CCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEec
Q 037288 316 RNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM 395 (513)
Q Consensus 316 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~ 395 (513)
.||+|++||++++.. +....+|...|.++ .|+|+|++|++|+.
T Consensus 170 ~Dg~v~iwD~~~~~~---~~~~~~~~~~v~~v----------------------------------~wspdg~~lasgs~ 212 (434)
T 2oit_A 170 ADGSIAVLQVTETVK---VCATLPSTVAVTSV----------------------------------CWSPKGKQLAVGKQ 212 (434)
T ss_dssp TTSCEEEEEESSSEE---EEEEECGGGCEEEE----------------------------------EECTTSSCEEEEET
T ss_pred CCCeEEEEEcCCCcc---eeeccCCCCceeEE----------------------------------EEcCCCCEEEEEcC
Confidence 999999999998743 22444566666664 55679999999999
Q ss_pred CCeEEEEecCCCCccceEEecCCCC-----ceeEEEEEEcCCCCEEEE-EeCCCc------EEEEeCCCC
Q 037288 396 DGTVKLYDHRLTTRGAVQSYEGHVN-----SHTRIQLGVDQSERFVMS-GGEDCK------LRIWSIRSG 453 (513)
Q Consensus 396 dg~i~lwd~~~~~~~~~~~~~~h~~-----~v~~~~~~~s~~g~~l~s-g~~Dg~------v~vwd~~~~ 453 (513)
||.|++||++ ......+..|.. .+...+++|++++.++++ +..||. +++|++...
T Consensus 213 dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 213 NGTVVQYLPT---LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TSCEEEECTT---CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCcEEEEccC---CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999999986 223444544322 234556899998887754 334433 899999865
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=5.1e-14 Score=137.65 Aligned_cols=217 Identities=9% Similarity=0.030 Sum_probs=156.7
Q ss_pred ccCcEEEEEEcCCCCEEEEEe--------CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEE-EEEeCCCeEEEEEC
Q 037288 255 FKCTVWTADFCTNPSQAVIGT--------NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVV-LCGFRNGAIVTVDV 325 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~s--------~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l-~sg~~dg~i~iwd~ 325 (513)
....+..++|+|+++.+++++ ++.|.+||..+++.+..+.....+.+++|+|+|+.+ +++..++.|.+||+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 446788999999999888765 446999999999988888877778999999999854 55556899999999
Q ss_pred CCCccccccccccccCc---------CeEEEeeCC---eEEEeE---------eecccCcccceeEee-cCCCceEEEEE
Q 037288 326 RKRQRGCSSRAGRRHRI---------PYSRLQRND---RVTNEQ---------WFELKANIWPSHTTF-MPSSISCLQSL 383 (513)
Q Consensus 326 ~~~~~~~~~~~~~~h~~---------~v~~v~~~~---~~~s~~---------w~~~~~~~~~~~~~~-~~~~v~~~~~~ 383 (513)
.+++... .+..+.. .+.++.|+| .++.+. |+...++.. ..+. ....+.+ ..+
T Consensus 119 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~-~~~ 192 (353)
T 3vgz_A 119 KTGEVKG---RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLK--TAIQNTGKMSTG-LAL 192 (353)
T ss_dssp TTCCEEE---EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE--EEECCCCTTCCC-CEE
T ss_pred CCCeeEE---EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceE--EEecCCCCccce-EEE
Confidence 9887533 3333321 267899988 344333 555544432 2333 2223444 478
Q ss_pred cCCCCEEEEEecCCeEEEEecCCCCccceEEecC----CCCceeEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEEE
Q 037288 384 QLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEG----HVNSHTRIQLGVDQSERFVMSGGE-DCKLRIWSIRSGELVFE 458 (513)
Q Consensus 384 ~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~----h~~~v~~~~~~~s~~g~~l~sg~~-Dg~v~vwd~~~~~~~~~ 458 (513)
+|+++++++++.++.|.+||+. ....+..+.. +...+ ..++|+|+|++|++++. ++.|.+||+.+++.+..
T Consensus 193 s~dg~~l~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 193 DSEGKRLYTTNADGELITIDTA--DNKILSRKKLLDDGKEHFF--INISLDTARQRAFITDSKAAEVLVVDTRNGNILAK 268 (353)
T ss_dssp ETTTTEEEEECTTSEEEEEETT--TTEEEEEEECCCSSSCCCE--EEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECC--CCeEEEEEEcCCCCCCccc--ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 8999999999999999999996 4445555543 33333 34889999998777665 49999999999999888
Q ss_pred ecCCCCCeEEEEEcCCCc-eEEeeCC
Q 037288 459 DKFSNSVPSAVCWRTQRS-MGPQIEG 483 (513)
Q Consensus 459 ~~~~~~~v~~v~~~p~~~-~~~t~~~ 483 (513)
+.... ...++|+|++. ++++...
T Consensus 269 ~~~~~--~~~~~~s~dg~~l~v~~~~ 292 (353)
T 3vgz_A 269 VAAPE--SLAVLFNPARNEAYVTHRQ 292 (353)
T ss_dssp EECSS--CCCEEEETTTTEEEEEETT
T ss_pred EEcCC--CceEEECCCCCEEEEEECC
Confidence 76544 25799999964 6666643
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.65 E-value=2.1e-15 Score=158.65 Aligned_cols=215 Identities=7% Similarity=-0.000 Sum_probs=152.2
Q ss_pred cCcEEEEEEcCCCCEEEEEe--CCeEEEEECCCCcEEEEeeeC-CCeEEEEEecCCcEEEEEeC---CCeEEEEECCC--
Q 037288 256 KCTVWTADFCTNPSQAVIGT--NLGAAMVDMETGMASWVCRSK-SDILAQQVIHSGNVVLCGFR---NGAIVTVDVRK-- 327 (513)
Q Consensus 256 ~~~V~~~~~s~~g~~l~s~s--~~~i~vwd~~~~~~~~~~~~~-~~V~~l~~~~~~~~l~sg~~---dg~i~iwd~~~-- 327 (513)
..+|++++|+|||+.||+++ ++++.||++.+++...+..+. ..+.+++|+|| +++++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 45899999999999999764 667999999888777666666 47999999999 88888875 55556655543
Q ss_pred CccccccccccccCcCeEEEeeCC--eEEE-eE------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC--
Q 037288 328 RQRGCSSRAGRRHRIPYSRLQRND--RVTN-EQ------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD-- 396 (513)
Q Consensus 328 ~~~~~~~~~~~~h~~~v~~v~~~~--~~~s-~~------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d-- 396 (513)
......+....++. +.++.++. .+++ ++ |++..++... ....+. .+ ..++|+|++|++++.+
T Consensus 100 ~g~~~~l~~~~~~~--~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~--l~~~~~--~~-~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 100 PGEEQRLEAVKPMR--ILSGVDTGEAVVFTGATEDRVALYALDGGGLRE--LARLPG--FG-FVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TTCCEECTTSCSBE--EEEEEECSSCEEEEEECSSCEEEEEEETTEEEE--EEEESS--CE-EEEEEETTEEEEEEEEET
T ss_pred CCccccccCCCCce--eeeeCCCCCeEEEEecCCCCceEEEccCCcEEE--eecCCC--ce-EEECCCCCEEEEEEEcCC
Confidence 22111122222222 33444444 2333 32 7776665322 222222 33 4789999999988877
Q ss_pred --CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEecCCCCCeEEEE--
Q 037288 397 --GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDC--KLRIWSIRSGELVFEDKFSNSVPSAVC-- 470 (513)
Q Consensus 397 --g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg--~v~vwd~~~~~~~~~~~~~~~~v~~v~-- 470 (513)
+.|++||+. .+....+..|...+.. ++|+|||++|+++..++ .|++||+.+++.. .+..+...+..++
T Consensus 173 ~~~~i~~~d~~---~g~~~~l~~~~~~~~~--~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 173 GRVSLFTSNLS---SGGLRVFDSGEGSFSS--ASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp TEEEEEEEETT---TCCCEEECCSSCEEEE--EEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCS
T ss_pred CCeEEEEEcCC---CCCceEeecCCCcccc--ceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhc
Confidence 789999985 4445677888877655 89999999999888898 8999999999887 7667766677777
Q ss_pred ------EcCCCceEEeeCCC
Q 037288 471 ------WRTQRSMGPQIEGK 484 (513)
Q Consensus 471 ------~~p~~~~~~t~~~~ 484 (513)
|+|++.++++...+
T Consensus 247 ~~~~~~~spdg~~~~~~~~~ 266 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARRE 266 (582)
T ss_dssp EEEEEEECTTSCEEEEEEET
T ss_pred cccceeEcCCCcEEEEEEcC
Confidence 99998766666544
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.64 E-value=1.9e-15 Score=163.10 Aligned_cols=214 Identities=5% Similarity=-0.056 Sum_probs=153.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCC----CeEEEEEecCCcEEEEEeCC---------CeEEEEE
Q 037288 258 TVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKS----DILAQQVIHSGNVVLCGFRN---------GAIVTVD 324 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~----~V~~l~~~~~~~~l~sg~~d---------g~i~iwd 324 (513)
.+.+++|+|||++++++.+++|++||+.+++...++.+.. .|.+++|+|||+.|++++.+ +.+++||
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 4678899999998877667789999999998777776443 39999999999999998764 7889999
Q ss_pred CCCCccccccccccccCcCeEEEeeCC---eEEEeE------eecccCcccceeEeec-CCCc-----------------
Q 037288 325 VRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ------WFELKANIWPSHTTFM-PSSI----------------- 377 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~------w~~~~~~~~~~~~~~~-~~~v----------------- 377 (513)
+.+++... +....+|...+..++|+| .++.++ |+...+... ..... ...+
T Consensus 98 ~~~~~~~~-l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~--~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 98 IPHGDPQS-LDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp SSSCCCEE-CCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred CCCCceEe-ccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceE--EEecCCCCCceECcccceeEEEEeccC
Confidence 99886533 445556677789999999 555554 666555432 11111 1122
Q ss_pred eEEEEEcCCCCEEEEEecCC----------------------------------eEEEEecCCCCccceEEecCC-----
Q 037288 378 SCLQSLQLYDQYFLASSMDG----------------------------------TVKLYDHRLTTRGAVQSYEGH----- 418 (513)
Q Consensus 378 ~~~~~~~~~~~~l~s~s~dg----------------------------------~i~lwd~~~~~~~~~~~~~~h----- 418 (513)
....+|+|+|++|++++.|+ .|++||+. .......+..+
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~--~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLN--GPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESS--SSCCCEECCCCCCGGG
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECC--CCceeEEeeCCccCCC
Confidence 13358999999999988653 79999986 33344566554
Q ss_pred -CCceeEEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCeEEEEecC-CCCCe----EEEEEcCCCceE
Q 037288 419 -VNSHTRIQLGVDQSERFVMSGGE----DCKLRIWSIRSGELVFEDKF-SNSVP----SAVCWRTQRSMG 478 (513)
Q Consensus 419 -~~~v~~~~~~~s~~g~~l~sg~~----Dg~v~vwd~~~~~~~~~~~~-~~~~v----~~v~~~p~~~~~ 478 (513)
...+ ..++|+|||++|++.+. +..|++||+.++++...+.. +...+ ..++|+|++..+
T Consensus 253 ~~~~~--~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 320 (723)
T 1xfd_A 253 REYYI--TMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKF 320 (723)
T ss_dssp SSEEE--EEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSE
T ss_pred cccee--EEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeE
Confidence 3334 44899999998877653 35799999999987766533 33333 378999996533
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.64 E-value=1.7e-14 Score=155.20 Aligned_cols=218 Identities=10% Similarity=0.008 Sum_probs=152.8
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCC-----Cccc
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRK-----RQRG 331 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~-----~~~~ 331 (513)
..|.+++|+|| ..++.+.++.+++||+.+++...+..+...+.+++|+|||+.|+.+ .|+.|++||+.+ ++..
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE
Confidence 57999999999 7777778889999999999887777777789999999999998885 789999999987 6542
Q ss_pred cccccccccCcC--------------eEEEeeCC---eEEEeE-------------------------------------
Q 037288 332 CSSRAGRRHRIP--------------YSRLQRND---RVTNEQ------------------------------------- 357 (513)
Q Consensus 332 ~~~~~~~~h~~~--------------v~~v~~~~---~~~s~~------------------------------------- 357 (513)
. ....+... +.++.|+| .++.++
T Consensus 160 ~---~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 160 A---VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp E---SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred E---eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 2 22223222 47899998 454443
Q ss_pred ---eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCC-----eEEEEecCCCCccceEEec--CCCCc---eeE
Q 037288 358 ---WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDG-----TVKLYDHRLTTRGAVQSYE--GHVNS---HTR 424 (513)
Q Consensus 358 ---w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg-----~i~lwd~~~~~~~~~~~~~--~h~~~---v~~ 424 (513)
|+...+...................|+|+|++|++++.++ .|++||+. .......+. .+... +..
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~--~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE--TGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT--TCCEEEEEEEEECSSCCCCCSC
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC--CCceeeEEEEccCCCeECccCC
Confidence 4443333211111001112233358899999999988776 89999996 331333322 12211 223
Q ss_pred EEEEEcC--CCCEEEEEeCCCcEEEEeCC-CCeEEEEecCCCCCeEE-EEEcCCCc-eEEeeCC
Q 037288 425 IQLGVDQ--SERFVMSGGEDCKLRIWSIR-SGELVFEDKFSNSVPSA-VCWRTQRS-MGPQIEG 483 (513)
Q Consensus 425 ~~~~~s~--~g~~l~sg~~Dg~v~vwd~~-~~~~~~~~~~~~~~v~~-v~~~p~~~-~~~t~~~ 483 (513)
+.|+| +|++|++++.|+.++||.+. ++..+..+..+...+.. ++|+|++. +++++..
T Consensus 315 --~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 315 --LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp --CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred --ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 68999 99999999999999999886 67777888777777876 89999964 4444443
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.63 E-value=3.3e-14 Score=159.72 Aligned_cols=185 Identities=12% Similarity=0.170 Sum_probs=142.5
Q ss_pred EeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeee------------CCCeEEEEEe-cCCcEEEEEeCC
Q 037288 251 LVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRS------------KSDILAQQVI-HSGNVVLCGFRN 317 (513)
Q Consensus 251 ~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~------------~~~V~~l~~~-~~~~~l~sg~~d 317 (513)
.+..|. .+...+|+|+|+.++++.++.|.+||+...... .+.. ...+.+++|+ |||+.|++++ +
T Consensus 240 ~l~~~~-~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~ 316 (1045)
T 1k32_A 240 KHTSFT-DYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-R 316 (1045)
T ss_dssp ECCCCC-SSCEEEEEESSSCEEEEETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-T
T ss_pred EecCCC-CcceeeEcCCCCEEEEEeCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-c
Confidence 344454 466779999999999999999999999655443 3322 2368999999 9999888887 8
Q ss_pred CeEEEEECCCCccccccccccccCc-CeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC
Q 037288 318 GAIVTVDVRKRQRGCSSRAGRRHRI-PYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD 396 (513)
Q Consensus 318 g~i~iwd~~~~~~~~~~~~~~~h~~-~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d 396 (513)
+.|.+|++..+.. ..+..|.. .+.. ..|+ +|+.|++++.+
T Consensus 317 ~~i~~~~~~~~~~----~~~~~~~~~~~~~----------------------------------~~~s-dg~~l~~~s~~ 357 (1045)
T 1k32_A 317 GQAFIQDVSGTYV----LKVPEPLRIRYVR----------------------------------RGGD-TKVAFIHGTRE 357 (1045)
T ss_dssp TEEEEECTTSSBE----EECSCCSCEEEEE----------------------------------ECSS-SEEEEEEEETT
T ss_pred CEEEEEcCCCCce----EEccCCCcceEEe----------------------------------eeEc-CCCeEEEEECC
Confidence 8999999986652 23444443 4444 3567 88899998888
Q ss_pred CeEE-EEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCC
Q 037288 397 GTVK-LYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQR 475 (513)
Q Consensus 397 g~i~-lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~ 475 (513)
+.+. +||+. .+....+.+|...+.. ++|+|||++|++++.|+.|++||+.+++.......|...+..++|+|++
T Consensus 358 ~~l~~~~d~~---~~~~~~l~~~~~~~~~--~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG 432 (1045)
T 1k32_A 358 GDFLGIYDYR---TGKAEKFEENLGNVFA--MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNS 432 (1045)
T ss_dssp EEEEEEEETT---TCCEEECCCCCCSEEE--EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTS
T ss_pred CceEEEEECC---CCCceEecCCccceee--eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCC
Confidence 8888 88985 3344555577666655 8999999999999999999999999999888877788889999999998
Q ss_pred ceEEeeC
Q 037288 476 SMGPQIE 482 (513)
Q Consensus 476 ~~~~t~~ 482 (513)
..++...
T Consensus 433 ~~la~~~ 439 (1045)
T 1k32_A 433 RFIAYGF 439 (1045)
T ss_dssp CEEEEEE
T ss_pred CeEEEEe
Confidence 7665554
No 152
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.61 E-value=2.3e-13 Score=132.17 Aligned_cols=213 Identities=9% Similarity=0.101 Sum_probs=137.2
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC--CeEEEEECC--CCcE--EEEeee
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN--LGAAMVDME--TGMA--SWVCRS 295 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~--~~i~vwd~~--~~~~--~~~~~~ 295 (513)
.++.+.+|++...... .......|...+.+++|+|+|++|++++. +.|.+|++. +++. +..+..
T Consensus 13 ~~~~v~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGAL----------TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp GGTEEEEEEECTTSCE----------EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred CCCeEEEEEECCCCcE----------EEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 4678888877531110 11223456778999999999998887754 579999997 6653 333444
Q ss_pred CCCeEEEEEecCCcEEEEEeC-CCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecC
Q 037288 296 KSDILAQQVIHSGNVVLCGFR-NGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMP 374 (513)
Q Consensus 296 ~~~V~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~ 374 (513)
...+.+++|+|+++.|++++. ++.|.+||+..+........ +...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~----------------------------------~~~~ 128 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV----------------------------------VEGL 128 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE----------------------------------ECCC
T ss_pred CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccc----------------------------------ccCC
Confidence 457899999999997766655 89999999953221110111 1111
Q ss_pred CCceEEEEEcCCCCEEEEEe-cCCeEEEEecCCCCccce---E--EecCCC-CceeEEEEEEcCCCCEEEEEe-CCCcEE
Q 037288 375 SSISCLQSLQLYDQYFLASS-MDGTVKLYDHRLTTRGAV---Q--SYEGHV-NSHTRIQLGVDQSERFVMSGG-EDCKLR 446 (513)
Q Consensus 375 ~~v~~~~~~~~~~~~l~s~s-~dg~i~lwd~~~~~~~~~---~--~~~~h~-~~v~~~~~~~s~~g~~l~sg~-~Dg~v~ 446 (513)
..+.+ ..++|+++++++++ .++.|.+||+. ..+.+ . .+..+. ..+. .++|+|+|++|++++ .++.|.
T Consensus 129 ~~~~~-~~~s~dg~~l~~~~~~~~~v~~~d~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~pdg~~l~~~~~~~~~i~ 203 (343)
T 1ri6_A 129 DGCHS-ANISPDNRTLWVPALKQDRICLFTVS--DDGHLVAQDPAEVTTVEGAGPR--HMVFHPNEQYAYCVNELNSSVD 203 (343)
T ss_dssp TTBCC-CEECTTSSEEEEEEGGGTEEEEEEEC--TTSCEEEEEEEEEECSTTCCEE--EEEECTTSSEEEEEETTTTEEE
T ss_pred CCceE-EEECCCCCEEEEecCCCCEEEEEEec--CCCceeeecccccccCCCCCcc--eEEECCCCCEEEEEeCCCCEEE
Confidence 22222 36788999888887 89999999996 32322 1 333332 2333 388999999776554 789999
Q ss_pred EEeCCC--CeE--EEEec---CC---CCCeEEEEEcCCC-ceEEeeCC
Q 037288 447 IWSIRS--GEL--VFEDK---FS---NSVPSAVCWRTQR-SMGPQIEG 483 (513)
Q Consensus 447 vwd~~~--~~~--~~~~~---~~---~~~v~~v~~~p~~-~~~~t~~~ 483 (513)
+|++.. ++. ..... .. ...+..++|+|++ .++++...
T Consensus 204 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~ 251 (343)
T 1ri6_A 204 VWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT 251 (343)
T ss_dssp EEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT
T ss_pred EEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC
Confidence 999953 433 22222 11 2356789999996 45555543
No 153
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.60 E-value=2e-13 Score=132.41 Aligned_cols=204 Identities=8% Similarity=0.005 Sum_probs=138.0
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe--CCeEEEEECCCCcE-EEEeeeCCC
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT--NLGAAMVDMETGMA-SWVCRSKSD 298 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s--~~~i~vwd~~~~~~-~~~~~~~~~ 298 (513)
.++.+.+|++.+... ...+..+...+ .++|+|+|+++++++ ++.|.+||+.+++. ...+.....
T Consensus 18 ~~~~v~~~d~~~~~~------------~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 84 (331)
T 3u4y_A 18 HLRRISFFSTDTLEI------------LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQS 84 (331)
T ss_dssp GGTEEEEEETTTCCE------------EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSS
T ss_pred CCCeEEEEeCcccce------------eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCC
Confidence 456777777664332 22233445566 999999999666553 55799999999986 555555455
Q ss_pred eEE-EEEecCCcEEEEEeCCC---eEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecC
Q 037288 299 ILA-QQVIHSGNVVLCGFRNG---AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMP 374 (513)
Q Consensus 299 V~~-l~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~ 374 (513)
... ++|+|+|++|+++..++ .|.+||+.+++... .+ ...
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~---~~----------------------------------~~~ 127 (331)
T 3u4y_A 85 SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS---TI----------------------------------PIP 127 (331)
T ss_dssp CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE---EE----------------------------------ECC
T ss_pred CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE---EE----------------------------------ECC
Confidence 445 99999999888665553 99999998776422 11 112
Q ss_pred CCceEEEEEcCCCCEEEEE-ecCCe-EEEEecCCCCccce-----EEecCCCCceeEEEEEEcCCCCEEEEE-eCCCcEE
Q 037288 375 SSISCLQSLQLYDQYFLAS-SMDGT-VKLYDHRLTTRGAV-----QSYEGHVNSHTRIQLGVDQSERFVMSG-GEDCKLR 446 (513)
Q Consensus 375 ~~v~~~~~~~~~~~~l~s~-s~dg~-i~lwd~~~~~~~~~-----~~~~~h~~~v~~~~~~~s~~g~~l~sg-~~Dg~v~ 446 (513)
....+ ..++|+|++++++ ..++. |.+|++. ..+.+ ..+. ..... ..++|+|+|++|+.+ ..++.|+
T Consensus 128 ~~~~~-~~~spdg~~l~~~~~~~~~~i~~~~~~--~~g~~~~~~~~~~~-~~~~~--~~~~~spdg~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 128 YDAVG-IAISPNGNGLILIDRSSANTVRRFKID--ADGVLFDTGQEFIS-GGTRP--FNITFTPDGNFAFVANLIGNSIG 201 (331)
T ss_dssp TTEEE-EEECTTSSCEEEEEETTTTEEEEEEEC--TTCCEEEEEEEEEC-SSSSE--EEEEECTTSSEEEEEETTTTEEE
T ss_pred CCccc-eEECCCCCEEEEEecCCCceEEEEEEC--CCCcEeecCCcccc-CCCCc--cceEECCCCCEEEEEeCCCCeEE
Confidence 22222 4778899865554 55588 9999986 33322 2222 22233 348999999966555 4689999
Q ss_pred EEeCCCCeE---EEEecCCCCCeEEEEEcCCCc-eEEeeC
Q 037288 447 IWSIRSGEL---VFEDKFSNSVPSAVCWRTQRS-MGPQIE 482 (513)
Q Consensus 447 vwd~~~~~~---~~~~~~~~~~v~~v~~~p~~~-~~~t~~ 482 (513)
+||+.+++. +..+..+ ..+..++|+|++. ++++..
T Consensus 202 v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 202 ILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp EEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS
T ss_pred EEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc
Confidence 999999988 7777653 5678999999976 555544
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.58 E-value=2.5e-12 Score=126.41 Aligned_cols=221 Identities=6% Similarity=-0.001 Sum_probs=140.8
Q ss_pred ccCcEEEEEEcCCCCEEEEEeC-----CeEEEEECCC--CcEEEE--ee-eCCCeEEEEEecCCcEEEEEe-CCCeEEEE
Q 037288 255 FKCTVWTADFCTNPSQAVIGTN-----LGAAMVDMET--GMASWV--CR-SKSDILAQQVIHSGNVVLCGF-RNGAIVTV 323 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~s~-----~~i~vwd~~~--~~~~~~--~~-~~~~V~~l~~~~~~~~l~sg~-~dg~i~iw 323 (513)
+...+..++|+|+|++|++++. +.|.+|++.. +....+ .. +......+++ +++.|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 6677888999999998887765 4699998765 543332 22 3345777777 787776666 58999999
Q ss_pred ECCCCccccccccc---c--------ccCcCeEEEeeCC---eEEEeE--------eecccCc-------ccc-----ee
Q 037288 324 DVRKRQRGCSSRAG---R--------RHRIPYSRLQRND---RVTNEQ--------WFELKAN-------IWP-----SH 369 (513)
Q Consensus 324 d~~~~~~~~~~~~~---~--------~h~~~v~~v~~~~---~~~s~~--------w~~~~~~-------~~~-----~~ 369 (513)
++........+... . .+...+.+++|+| .++... |++.... +.. ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754432111111 1 1123457899999 344443 6555333 111 11
Q ss_pred EeecCCCceEEEEEcCCCCEEEEEe-cCCeEEEEecCCCCccceEEecC---CCCceeEEEEEEcCCCCEEEEEeCC--C
Q 037288 370 TTFMPSSISCLQSLQLYDQYFLASS-MDGTVKLYDHRLTTRGAVQSYEG---HVNSHTRIQLGVDQSERFVMSGGED--C 443 (513)
Q Consensus 370 ~~~~~~~v~~~~~~~~~~~~l~s~s-~dg~i~lwd~~~~~~~~~~~~~~---h~~~v~~~~~~~s~~g~~l~sg~~D--g 443 (513)
.......... +.|+|+|+++++++ .++.|.+||+.......+..+.. +.... ..++|+|||++|+++..+ +
T Consensus 206 ~~~~~~~~~~-~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~--~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 206 KVAPGSGPRH-LIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS--GDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp ECCTTCCEEE-EEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE--EEEEECTTSSEEEEEECSSSC
T ss_pred ecCCCCCCeE-EEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc--ccEEECCCCCEEEEECCCCCC
Confidence 1222334444 58899999887777 68999999986211112333332 22233 348999999999777665 8
Q ss_pred cEEEEeCC--CCe--EEEEecCCCCCeEEEEEcCCCc-eEEee
Q 037288 444 KLRIWSIR--SGE--LVFEDKFSNSVPSAVCWRTQRS-MGPQI 481 (513)
Q Consensus 444 ~v~vwd~~--~~~--~~~~~~~~~~~v~~v~~~p~~~-~~~t~ 481 (513)
.|.+|++. +++ .+..+.. ...+..++|+|++. +++++
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred EEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence 99999995 455 4444544 55688999999975 44444
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.58 E-value=7.4e-12 Score=123.01 Aligned_cols=215 Identities=10% Similarity=-0.008 Sum_probs=133.8
Q ss_pred eccccCcEEEEEEcCCCCEEEEEe--CCeEEEEECCCCcEE----EEeee-----------CCCeEEEEEecCCcEEEEE
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGT--NLGAAMVDMETGMAS----WVCRS-----------KSDILAQQVIHSGNVVLCG 314 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s--~~~i~vwd~~~~~~~----~~~~~-----------~~~V~~l~~~~~~~~l~sg 314 (513)
...+......+++ ++++++++. ++.|.+|++.....+ ....+ ...+.+++|+|+|+.|+++
T Consensus 95 ~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~ 172 (361)
T 3scy_A 95 QKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD 172 (361)
T ss_dssp EECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE
T ss_pred eccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEE
Confidence 3345556777777 888777664 556999999754321 11111 1235889999999866555
Q ss_pred e-CCCeEEEEECCCCcc------ccc----cccccccCcCeEEEeeCC---eEEEeE--------eecccCcccceeEee
Q 037288 315 F-RNGAIVTVDVRKRQR------GCS----SRAGRRHRIPYSRLQRND---RVTNEQ--------WFELKANIWPSHTTF 372 (513)
Q Consensus 315 ~-~dg~i~iwd~~~~~~------~~~----~~~~~~h~~~v~~v~~~~---~~~s~~--------w~~~~~~~~~~~~~~ 372 (513)
+ .++.|.+|++..... ... ......+...+..++|+| .++... |+...+.+.....+.
T Consensus 173 ~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~ 252 (361)
T 3scy_A 173 DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA 252 (361)
T ss_dssp ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE
T ss_pred eCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe
Confidence 4 589999999875542 100 011223345578899999 343333 777655443333332
Q ss_pred cC----CCceEEEEEcCCCCEEEEEecC--CeEEEEecCCCCcc--ceEEecCCCCceeEEEEEEcCCCCEEEEEe-CCC
Q 037288 373 MP----SSISCLQSLQLYDQYFLASSMD--GTVKLYDHRLTTRG--AVQSYEGHVNSHTRIQLGVDQSERFVMSGG-EDC 443 (513)
Q Consensus 373 ~~----~~v~~~~~~~~~~~~l~s~s~d--g~i~lwd~~~~~~~--~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~-~Dg 443 (513)
.. ... .-+.++|+|++|+++..+ +.|.+|++...... .+..+.. ...+.. ++|+|+|++|++++ .++
T Consensus 253 ~~~~~~~~~-~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~--~~~spdg~~l~~~~~~~~ 328 (361)
T 3scy_A 253 ADTVNAQGS-GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRN--FIITPNGKYLLVACRDTN 328 (361)
T ss_dssp SCSSCCCCE-EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCE--EEECTTSCEEEEEETTTT
T ss_pred cCCCCCCCc-ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCce--EEECCCCCEEEEEECCCC
Confidence 21 123 335799999998776654 89999998521222 3444443 233344 89999999998887 578
Q ss_pred cEEEE--eCCCCeEEEEe-cCCCCCeEEEEEc
Q 037288 444 KLRIW--SIRSGELVFED-KFSNSVPSAVCWR 472 (513)
Q Consensus 444 ~v~vw--d~~~~~~~~~~-~~~~~~v~~v~~~ 472 (513)
.|.+| |..++++.... ..+...+.+++|.
T Consensus 329 ~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 329 VIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 99995 55677766543 2234568888885
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.57 E-value=5.1e-13 Score=129.42 Aligned_cols=211 Identities=9% Similarity=-0.078 Sum_probs=140.9
Q ss_pred cEEEEEEcCCCCEEEE-Ee-CCeEEEEECCCCcEEEEeeeCC------CeEEEEEecCCcEEEEEe------------CC
Q 037288 258 TVWTADFCTNPSQAVI-GT-NLGAAMVDMETGMASWVCRSKS------DILAQQVIHSGNVVLCGF------------RN 317 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s-~s-~~~i~vwd~~~~~~~~~~~~~~------~V~~l~~~~~~~~l~sg~------------~d 317 (513)
.+..++|+|+|+.+++ +. ++.|.+||+.+++.+..+.... .+.+++|+|+|+.|+++. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 4788999999986654 43 4569999999998877665433 678899999999888886 57
Q ss_pred CeEEEEECCCCccccccccccccCcCeEEEeeCC---eEEEeE-----eecccCcccceeEeecCCCceEEEEEcCCCCE
Q 037288 318 GAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ-----WFELKANIWPSHTTFMPSSISCLQSLQLYDQY 389 (513)
Q Consensus 318 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~-----w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 389 (513)
+.|.+||+.+++... .+.. ...+..+.|+| .++.+. |+...++. ...+........ ..++|++..
T Consensus 115 ~~i~v~d~~~~~~~~---~~~~-~~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~-~~~s~dg~~ 187 (337)
T 1pby_B 115 TRVALYDAETLSRRK---AFEA-PRQITMLAWARDGSKLYGLGRDLHVMDPEAGTL--VEDKPIQSWEAE-TYAQPDVLA 187 (337)
T ss_dssp CEEEEEETTTTEEEE---EEEC-CSSCCCEEECTTSSCEEEESSSEEEEETTTTEE--EEEECSTTTTTT-TBCCCBCCC
T ss_pred ceEEEEECCCCcEEE---EEeC-CCCcceeEECCCCCEEEEeCCeEEEEECCCCcE--eeeeeccccCCC-ceeCCCccE
Confidence 999999998776432 3322 34567778887 344433 55544432 122222221222 256677775
Q ss_pred EEEEecC-C-----------------------eEEEEecCCCCccc-eEEecCCCCceeEEEEEEcCCCCEEEEEeCCCc
Q 037288 390 FLASSMD-G-----------------------TVKLYDHRLTTRGA-VQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCK 444 (513)
Q Consensus 390 l~s~s~d-g-----------------------~i~lwd~~~~~~~~-~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~ 444 (513)
++.++.+ + .|.+||+. .... ...+..+...+.. ++|+|+|++|+++ ++.
T Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~--~~~~~~~~~~~~~~~~~~--~~~s~dg~~l~~~--~~~ 261 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE--TGEMAMREVRIMDVFYFS--TAVNPAKTRAFGA--YNV 261 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT--TCCEEEEEEEECSSCEEE--EEECTTSSEEEEE--ESE
T ss_pred EeeeccCCCceeeeeeccccccccccccccccceEEEeCC--CCCceEeecCCCCCceee--EEECCCCCEEEEe--CCe
Confidence 5544332 2 46788886 3222 2233344444444 8999999999988 799
Q ss_pred EEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeC
Q 037288 445 LRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 445 v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
|++||+.+++.+..+... ..+.+++|+|++..++.++
T Consensus 262 v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~ 298 (337)
T 1pby_B 262 LESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGG 298 (337)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEES
T ss_pred EEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEc
Confidence 999999999988887653 4578999999965444433
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.54 E-value=6.3e-13 Score=129.52 Aligned_cols=221 Identities=9% Similarity=-0.023 Sum_probs=146.7
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEecccc-CcEEEEEEcCCCCEEEEE--eCCeEEEEECCCCcEEEEeeeCC-
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFK-CTVWTADFCTNPSQAVIG--TNLGAAMVDMETGMASWVCRSKS- 297 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~s~~g~~l~s~--s~~~i~vwd~~~~~~~~~~~~~~- 297 (513)
.++.+.++++.+... +..+..+. ..+..++|+|+|++++++ .++.|.+||+.+++....+....
T Consensus 19 ~~~~v~~~d~~~~~~------------~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 19 YPNNLHVVDVASDTV------------YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp TTTEEEEEETTTTEE------------EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred CCCeEEEEECCCCcE------------EEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 367788887764322 12222221 257789999999866544 35569999999998776665322
Q ss_pred ------CeEEEEEecCCcEEEEEeCC------------CeEEEEECCCCccccccccccccCcCeEEEeeCC--eEEEeE
Q 037288 298 ------DILAQQVIHSGNVVLCGFRN------------GAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND--RVTNEQ 357 (513)
Q Consensus 298 ------~V~~l~~~~~~~~l~sg~~d------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~s~~ 357 (513)
.+.+++|+|+|+.|++++.+ +.|.+||+.+++....+..+. +...+.+++|+| .++.++
T Consensus 87 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~~~~ 165 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLYVAG 165 (349)
T ss_dssp TTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEEEES
T ss_pred cccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEEEcc
Confidence 27899999999999988865 999999998754322122222 333578888988 444433
Q ss_pred -----eecccCcccceeEeec-----------------------------------------------------------
Q 037288 358 -----WFELKANIWPSHTTFM----------------------------------------------------------- 373 (513)
Q Consensus 358 -----w~~~~~~~~~~~~~~~----------------------------------------------------------- 373 (513)
|+...++.........
T Consensus 166 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
T 1jmx_B 166 PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT 245 (349)
T ss_dssp SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCE
T ss_pred CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcE
Confidence 6655444221110000
Q ss_pred -------CCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcE
Q 037288 374 -------PSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKL 445 (513)
Q Consensus 374 -------~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v 445 (513)
.........++| ++++++++ ++.|.+||+. ....+..+..+. .+.. ++|+|+|++|++++.++.|
T Consensus 246 ~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~--~~~~~~~~~~~~-~~~~--~~~s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 246 HTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLK--QRKLIKAANLDH-TYYC--VAFDKKGDKLYLGGTFNDL 318 (349)
T ss_dssp EEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETT--TTEEEEEEECSS-CCCE--EEECSSSSCEEEESBSSEE
T ss_pred EecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECc--cCeEEEEEcCCC-Cccc--eEECCCCCEEEEecCCCeE
Confidence 000111235678 99998888 8899999996 444555555332 2334 8999999999888889999
Q ss_pred EEEeCCCCeEEEEecCC
Q 037288 446 RIWSIRSGELVFEDKFS 462 (513)
Q Consensus 446 ~vwd~~~~~~~~~~~~~ 462 (513)
++||+.+++.+..+...
T Consensus 319 ~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 319 AVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEETTTTEEEEEEECS
T ss_pred EEEeccccceeeeeecC
Confidence 99999999998887654
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.54 E-value=1.6e-14 Score=155.87 Aligned_cols=208 Identities=7% Similarity=-0.025 Sum_probs=143.8
Q ss_pred EEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCC----CeEEEEEecCCcEEEEEeC---------CCeEEEEECCC
Q 037288 261 TADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKS----DILAQQVIHSGNVVLCGFR---------NGAIVTVDVRK 327 (513)
Q Consensus 261 ~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~----~V~~l~~~~~~~~l~sg~~---------dg~i~iwd~~~ 327 (513)
+++|+|+|++++++.++.|++||+.+++...++.+.. .+.+++|+|||+.|+.++. |+.|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 6799999987777777889999999999887776443 3899999999999988876 79999999998
Q ss_pred CccccccccccccCcCeEEEeeCC---eEEEeE------eecccCcccceeEeecCCCce----------------EEEE
Q 037288 328 RQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ------WFELKANIWPSHTTFMPSSIS----------------CLQS 382 (513)
Q Consensus 328 ~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~------w~~~~~~~~~~~~~~~~~~v~----------------~~~~ 382 (513)
++... ...+ ...+..+.|+| .++.+. |+...+.............+. ...+
T Consensus 100 g~~~~-~~~l---~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 100 GEFVR-GNEL---PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TEECC-SSCC---CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred Ccccc-ceec---CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 86521 1223 24688899999 555544 666555432110000111111 1358
Q ss_pred EcCCCCEEEEEecCC----------------------------------eEEEEecCCCCccce--------EEecCCCC
Q 037288 383 LQLYDQYFLASSMDG----------------------------------TVKLYDHRLTTRGAV--------QSYEGHVN 420 (513)
Q Consensus 383 ~~~~~~~l~s~s~dg----------------------------------~i~lwd~~~~~~~~~--------~~~~~h~~ 420 (513)
|+|||++|++++.|. .|++||+. ..... ..+.+|..
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTT--YPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESS--CHHHHCCEECCCCHHHHTSCE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECC--CCCccceeEccCCccCCCCcc
Confidence 999999999988653 78899985 32221 12335666
Q ss_pred ceeEEEEEEcCCCCEEEEEeCC----CcEEEEe----CCCCeEEEEe----cCCCCCeE-----EEEEcCCCc
Q 037288 421 SHTRIQLGVDQSERFVMSGGED----CKLRIWS----IRSGELVFED----KFSNSVPS-----AVCWRTQRS 476 (513)
Q Consensus 421 ~v~~~~~~~s~~g~~l~sg~~D----g~v~vwd----~~~~~~~~~~----~~~~~~v~-----~v~~~p~~~ 476 (513)
.+.. ++|+||++++++.... ..|++|| +.++++...+ ..+...+. .++|+|++.
T Consensus 254 ~~~~--~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 324 (719)
T 1z68_A 254 YFSW--LTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAI 324 (719)
T ss_dssp EEEE--EEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred eEEE--eEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCC
Confidence 6655 8999998877764432 2488999 8887765444 35556565 789999965
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.52 E-value=1.7e-12 Score=127.98 Aligned_cols=226 Identities=7% Similarity=-0.032 Sum_probs=144.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECC-CCcEEEEeeeC--CCeEEEEEecCCcE--EEEEe-------------CCC
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDME-TGMASWVCRSK--SDILAQQVIHSGNV--VLCGF-------------RNG 318 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~-~~~~~~~~~~~--~~V~~l~~~~~~~~--l~sg~-------------~dg 318 (513)
..+..++|+|+|++|++++.+.|.+||+. +++......+. +.+.+++|+|+|+. ++++. .+|
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 46788999999998887766699999997 78765444332 34667899999984 55553 689
Q ss_pred eEEEEECCC-Ccccccccccc-ccCcCeEEEeeCC---eEEEeE--------eecc-cCcccceeEeec---CCCceEEE
Q 037288 319 AIVTVDVRK-RQRGCSSRAGR-RHRIPYSRLQRND---RVTNEQ--------WFEL-KANIWPSHTTFM---PSSISCLQ 381 (513)
Q Consensus 319 ~i~iwd~~~-~~~~~~~~~~~-~h~~~v~~v~~~~---~~~s~~--------w~~~-~~~~~~~~~~~~---~~~v~~~~ 381 (513)
.+.+|++.. ++....+..+. .+...+.+++|+| .++++. |+.. .++......+.. ...+.. +
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~-~ 198 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW-V 198 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE-E
T ss_pred eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE-e
Confidence 999999974 43221111111 2456789999999 344432 7776 455433233332 334555 4
Q ss_pred EEcCCCCEEEEEec-CCeEEEEecCCCCccc---eEEec-------CCCC----ceeEEEEE-EcCCCCEEEEEeCCC--
Q 037288 382 SLQLYDQYFLASSM-DGTVKLYDHRLTTRGA---VQSYE-------GHVN----SHTRIQLG-VDQSERFVMSGGEDC-- 443 (513)
Q Consensus 382 ~~~~~~~~l~s~s~-dg~i~lwd~~~~~~~~---~~~~~-------~h~~----~v~~~~~~-~s~~g~~l~sg~~Dg-- 443 (513)
.|+|+|+++++++. ++.|.+|++....... ...+. +|.. ......++ |+|||++|++++.+.
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~ 278 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF 278 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC
Confidence 78999999888775 7899999875211222 12222 1121 00234488 999999988776432
Q ss_pred ----cEEEEeCC-CCeEEEE---ecCCCCCeEEEEEcC---CCceEEeeCC
Q 037288 444 ----KLRIWSIR-SGELVFE---DKFSNSVPSAVCWRT---QRSMGPQIEG 483 (513)
Q Consensus 444 ----~v~vwd~~-~~~~~~~---~~~~~~~v~~v~~~p---~~~~~~t~~~ 483 (513)
.|.+|++. ++++... ...+...+..++|+| ++.+++..+.
T Consensus 279 ~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 279 ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS
T ss_pred CCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc
Confidence 89999996 6765542 333444567899999 6655554443
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.51 E-value=3e-12 Score=124.69 Aligned_cols=210 Identities=8% Similarity=-0.006 Sum_probs=141.4
Q ss_pred EEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEeeeCC--CeEEEEEecCCcEE-EEEeCCCeEEEEECCCCcccccccc
Q 037288 261 TADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCRSKS--DILAQQVIHSGNVV-LCGFRNGAIVTVDVRKRQRGCSSRA 336 (513)
Q Consensus 261 ~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~~~~--~V~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~ 336 (513)
.+++++++.++++++ ++.|.+||+.+++.+..+.... .+..++|+|+|+.+ +++..++.|.+||+.+++... .
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~---~ 80 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF---H 80 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE---E
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE---E
Confidence 346777888888775 5669999999999887777555 68899999999855 455678999999998876533 2
Q ss_pred ccc-c-----CcCeEEEeeCC---eEEEeE-------------------eecccCccc-ceeEeecCCCceEEEEEcCCC
Q 037288 337 GRR-H-----RIPYSRLQRND---RVTNEQ-------------------WFELKANIW-PSHTTFMPSSISCLQSLQLYD 387 (513)
Q Consensus 337 ~~~-h-----~~~v~~v~~~~---~~~s~~-------------------w~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 387 (513)
+.. + ...+..++|+| .++.+. |+...+... .......+..+.++ .++|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~s~dg 159 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLM-RAADDG 159 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCE-EECTTS
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccce-eECCCC
Confidence 221 1 23377888988 333322 665554322 22344455555554 688999
Q ss_pred CEEEEEecCCeEEEEecCCCCccceEEecCCC------------------------------------------------
Q 037288 388 QYFLASSMDGTVKLYDHRLTTRGAVQSYEGHV------------------------------------------------ 419 (513)
Q Consensus 388 ~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~------------------------------------------------ 419 (513)
+ +++++ +.|.+||+. ....+..+..+.
T Consensus 160 ~-l~~~~--~~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 160 S-LYVAG--PDIYKMDVK--TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp C-EEEES--SSEEEECTT--TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred c-EEEcc--CcEEEEeCC--CCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 9 55544 449999986 333444443221
Q ss_pred --------Cce----------eEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEe
Q 037288 420 --------NSH----------TRIQLGVDQ-SERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQ 480 (513)
Q Consensus 420 --------~~v----------~~~~~~~s~-~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t 480 (513)
+.+ ....++|+| +|++|+++ ++.|.+||+.+++.+..+... ..+.+++|+|++..++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYL 311 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEE
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEE
Confidence 000 112356789 99999888 889999999999988887653 34779999999644333
Q ss_pred eC
Q 037288 481 IE 482 (513)
Q Consensus 481 ~~ 482 (513)
++
T Consensus 312 ~~ 313 (349)
T 1jmx_B 312 GG 313 (349)
T ss_dssp ES
T ss_pred ec
Confidence 33
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.50 E-value=1.2e-12 Score=141.11 Aligned_cols=215 Identities=7% Similarity=-0.101 Sum_probs=139.3
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee--eCCCe-----------------EEEEEecCCcEEEEEeCC
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR--SKSDI-----------------LAQQVIHSGNVVLCGFRN 317 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~--~~~~V-----------------~~l~~~~~~~~l~sg~~d 317 (513)
..+..++|||||+.||++.++.|++||+.+++...+.. +...| .+++|+|||+.|+.++.|
T Consensus 110 ~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred cccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 46888999999999999999999999999887655432 22222 489999999999988765
Q ss_pred C----------------------------------eEEEEECCCCccc---ccc---ccccccCcCeEEEeeCC--eEEE
Q 037288 318 G----------------------------------AIVTVDVRKRQRG---CSS---RAGRRHRIPYSRLQRND--RVTN 355 (513)
Q Consensus 318 g----------------------------------~i~iwd~~~~~~~---~~~---~~~~~h~~~v~~v~~~~--~~~s 355 (513)
. .|++||+.+++.. . + ..+.+|...+..++|+| .++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~SpD~~~~~ 268 (719)
T 1z68_A 190 DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQE-VPVPAMIASSDYYFSWLTWVTDERVCL 268 (719)
T ss_dssp CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEE-CCCCHHHHTSCEEEEEEEESSSSEEEE
T ss_pred CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeE-ccCCccCCCCcceEEEeEEeCCCeEEE
Confidence 2 8899999877532 1 1 23557888999999999 3332
Q ss_pred e-E-----------ee----cccCcccceeE---eecCCCce----EEEEEcCCCCEEEE--EecCCe--EEEEecCCCC
Q 037288 356 E-Q-----------WF----ELKANIWPSHT---TFMPSSIS----CLQSLQLYDQYFLA--SSMDGT--VKLYDHRLTT 408 (513)
Q Consensus 356 ~-~-----------w~----~~~~~~~~~~~---~~~~~~v~----~~~~~~~~~~~l~s--~s~dg~--i~lwd~~~~~ 408 (513)
. . |+ ...++...... ..+...+. ....|+|+|+.|+. +..+|. |.+||+.
T Consensus 269 ~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~--- 345 (719)
T 1z68_A 269 QWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDT--- 345 (719)
T ss_dssp EEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSC---
T ss_pred EEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECC---
Confidence 2 1 55 44444332221 12223333 13478999996554 445554 5666664
Q ss_pred ccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCC--Ce-EEEEecC----CCCCeEEEEEcCCCc
Q 037288 409 RGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED-----CKLRIWSIRS--GE-LVFEDKF----SNSVPSAVCWRTQRS 476 (513)
Q Consensus 409 ~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-----g~v~vwd~~~--~~-~~~~~~~----~~~~v~~v~~~p~~~ 476 (513)
.+....+..+...+.. +.++ +++.|+..+.+ +.+++|.+.. +. ....+.. +...+..+.|+|++.
T Consensus 346 ~~~~~~lt~~~~~v~~--~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~ 422 (719)
T 1z68_A 346 VENAIQITSGKWEAIN--IFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAK 422 (719)
T ss_dssp STTCEECSCSSSCEEE--EEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGS
T ss_pred CCceEecccCceEEEE--EEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCC
Confidence 3345566655555544 4555 77777766654 8889998754 42 1233332 445678899999854
Q ss_pred eE
Q 037288 477 MG 478 (513)
Q Consensus 477 ~~ 478 (513)
.+
T Consensus 423 ~l 424 (719)
T 1z68_A 423 YY 424 (719)
T ss_dssp SE
T ss_pred EE
Confidence 33
No 162
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.47 E-value=4.8e-11 Score=117.42 Aligned_cols=229 Identities=10% Similarity=0.010 Sum_probs=147.2
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe-----------CCeEEEEECCCCcEE
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT-----------NLGAAMVDMETGMAS 290 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s-----------~~~i~vwd~~~~~~~ 290 (513)
.++.+.+++..+... +..+..+..+ .++|+|||++++++. ++.|.+||+.+++.+
T Consensus 29 ~d~~v~v~D~~t~~~------------~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~ 94 (361)
T 2oiz_A 29 TESRVHVYDYTNGKF------------LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFE 94 (361)
T ss_dssp GGCEEEEEETTTCCE------------EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEE
T ss_pred ccCeEEEEECCCCeE------------EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEE
Confidence 366788887654322 2234444445 899999999888764 345999999999887
Q ss_pred EEeee-------CCCeEEEEEecCCcEEEEEeC--CCeEEEEECCCCcccccccc-cccc--------------------
Q 037288 291 WVCRS-------KSDILAQQVIHSGNVVLCGFR--NGAIVTVDVRKRQRGCSSRA-GRRH-------------------- 340 (513)
Q Consensus 291 ~~~~~-------~~~V~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~-~~~h-------------------- 340 (513)
..+.. ......++|+|||++|+++.. ++.|.+||+.+.+... . +...
T Consensus 95 ~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~---~~i~~~~~~~v~~~p~~~~~~~~~~~ 171 (361)
T 2oiz_A 95 KEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVE---DVTAAAGCWSVIPQPNRPRSFMTICG 171 (361)
T ss_dssp EEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEE---EEGGGTTEEEEEECTTSSSEEEEEET
T ss_pred EEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEE---EEecCCCcceeEEcCCCCeeEEEECC
Confidence 76652 234678999999999998874 6899999999876533 2 1110
Q ss_pred CcCeEEEeeCC--eEE-Ee----E------------------------------eecccCcccceeEeec----------
Q 037288 341 RIPYSRLQRND--RVT-NE----Q------------------------------WFELKANIWPSHTTFM---------- 373 (513)
Q Consensus 341 ~~~v~~v~~~~--~~~-s~----~------------------------------w~~~~~~~~~~~~~~~---------- 373 (513)
.+.+..+++.. .+. .. . ++...........+..
T Consensus 172 dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
T 2oiz_A 172 DGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNW 251 (361)
T ss_dssp TSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTC
T ss_pred CCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccccc
Confidence 01111111111 000 00 0 1110000000000000
Q ss_pred -CCCceEEEEEcCCCCEEEEEec-----------CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeC
Q 037288 374 -PSSISCLQSLQLYDQYFLASSM-----------DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE 441 (513)
Q Consensus 374 -~~~v~~~~~~~~~~~~l~s~s~-----------dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~ 441 (513)
+.... ...++++++.+.++.. ++.|.+||+. ..+.+.++..+. ... ++|+|+|++|++++.
T Consensus 252 ~p~g~~-~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~--t~~~v~~i~~~~--p~~--ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 252 VPGGYN-LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTK--TKQRVARIPGRD--ALS--MTIDQQRNLMLTLDG 324 (361)
T ss_dssp EECCSS-CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETT--TTEEEEEEECTT--CCE--EEEETTTTEEEEECS
T ss_pred ccCCee-EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECC--CCcEEEEEecCC--eeE--EEECCCCCEEEEeCC
Confidence 00111 1367888787776643 3489999997 555788888776 444 899999999999887
Q ss_pred CCcEEEEeCCCC--eEEEEecCCCCCeEEEEEcCCC
Q 037288 442 DCKLRIWSIRSG--ELVFEDKFSNSVPSAVCWRTQR 475 (513)
Q Consensus 442 Dg~v~vwd~~~~--~~~~~~~~~~~~v~~v~~~p~~ 475 (513)
++|.+||+.++ +++..+.........++++|++
T Consensus 325 -~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 325 -GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp -SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred -CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 99999999999 9999976667778999999984
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.45 E-value=2.1e-12 Score=139.66 Aligned_cols=211 Identities=8% Similarity=0.015 Sum_probs=140.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCC-C-----eEEEEEecCCcEEEEEeCC---------CeEE
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKS-D-----ILAQQVIHSGNVVLCGFRN---------GAIV 321 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~-~-----V~~l~~~~~~~~l~sg~~d---------g~i~ 321 (513)
.....+.|+|||++++++ +++|++||+.++++..++..+. . ...++|+|||+.|+.++.+ +.+.
T Consensus 17 ~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 345689999999999887 8889999999999877666322 2 2448899999999998876 6677
Q ss_pred EEECCCCccccccccccccCcCeEEEeeCC---eEEEeE------eecccCcccceeEeecCC---Cce-----------
Q 037288 322 TVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ------WFELKANIWPSHTTFMPS---SIS----------- 378 (513)
Q Consensus 322 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~------w~~~~~~~~~~~~~~~~~---~v~----------- 378 (513)
+||+.+++. ..+..|...+...+|+| .++.+. |+...+... .+...+ .+.
T Consensus 96 ~~d~~~~~~----~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~---~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 96 IYDLNKRQL----ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSY---RITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEETTTTEE----CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCE---ECCSCCBTTTEEESBCCHHHHHH
T ss_pred EEECCCCcE----EEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceE---EEcCCCCccceecCcccccccch
Confidence 999998863 35677888899999999 455444 555544422 111111 111
Q ss_pred -----EEEEEcCCCCEEEEEecCC------------------------------------eEEEEecCCCC-cc--ceEE
Q 037288 379 -----CLQSLQLYDQYFLASSMDG------------------------------------TVKLYDHRLTT-RG--AVQS 414 (513)
Q Consensus 379 -----~~~~~~~~~~~l~s~s~dg------------------------------------~i~lwd~~~~~-~~--~~~~ 414 (513)
...+|+|||+.||.++.|. .|++||+.... .. ....
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 1257999999999886432 47778875200 21 2333
Q ss_pred ec------CCCCceeEEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCe----EEE--Ee--cCCCCCeE-----EEEE
Q 037288 415 YE------GHVNSHTRIQLGVDQSERFVMSGGE----DCKLRIWSIRSGE----LVF--ED--KFSNSVPS-----AVCW 471 (513)
Q Consensus 415 ~~------~h~~~v~~~~~~~s~~g~~l~sg~~----Dg~v~vwd~~~~~----~~~--~~--~~~~~~v~-----~v~~ 471 (513)
+. +|...+. .++|+|||++++.... +..|++||+.+++ +.. .+ ..+...+. .++|
T Consensus 249 l~~~~~~~~~~~~~~--~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 249 ITAPASMLIGDHYLC--DVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF 326 (740)
T ss_dssp ECCCHHHHTSCEEEE--EEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE
T ss_pred ecCCccCCCCCeEEE--EEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE
Confidence 43 2554444 4899999997665432 3479999999887 211 11 33444443 7889
Q ss_pred cCCCce
Q 037288 472 RTQRSM 477 (513)
Q Consensus 472 ~p~~~~ 477 (513)
+|++..
T Consensus 327 spDG~~ 332 (740)
T 4a5s_A 327 TLDGNS 332 (740)
T ss_dssp CTTSSE
T ss_pred cCCCCE
Confidence 999753
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.44 E-value=1.5e-11 Score=121.79 Aligned_cols=167 Identities=8% Similarity=-0.023 Sum_probs=104.9
Q ss_pred CeEEEEECCCCcEEEEeeeCCCeEEEEEec-CCcEEEEEeCC------CeEEEEECCCCccccccccccccCc--CeEEE
Q 037288 277 LGAAMVDMETGMASWVCRSKSDILAQQVIH-SGNVVLCGFRN------GAIVTVDVRKRQRGCSSRAGRRHRI--PYSRL 347 (513)
Q Consensus 277 ~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~-~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v 347 (513)
..|.+||+.+++...+..+...+..++|+| ||+.|+....+ ..|.++|+...... .+..+.. .+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~- 242 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR----KVKTHAEGESCTH- 242 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE----ESCCCCTTEEEEE-
T ss_pred ceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE----EeeeCCCCccccc-
Confidence 358999999998887777888899999999 99888776653 37888887655422 2222221 1222
Q ss_pred eeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEec-CC----eEEEEecCCCCccceEEecCCCCce
Q 037288 348 QRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM-DG----TVKLYDHRLTTRGAVQSYEGHVNSH 422 (513)
Q Consensus 348 ~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~-dg----~i~lwd~~~~~~~~~~~~~~h~~~v 422 (513)
..|+|+|+.|+..+. ++ .|++||+.......+..+.++....
T Consensus 243 ---------------------------------~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 289 (388)
T 3pe7_A 243 ---------------------------------EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLM 289 (388)
T ss_dssp ---------------------------------EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEE
T ss_pred ---------------------------------ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeee
Confidence 367889997765543 22 3999999632222343444311000
Q ss_pred eE-EEEEEcCCCCEEEEE---------eCCCcEEEEeCCCCeEEEEecCCCC-----------CeEEEEEcCCCc-eEEe
Q 037288 423 TR-IQLGVDQSERFVMSG---------GEDCKLRIWSIRSGELVFEDKFSNS-----------VPSAVCWRTQRS-MGPQ 480 (513)
Q Consensus 423 ~~-~~~~~s~~g~~l~sg---------~~Dg~v~vwd~~~~~~~~~~~~~~~-----------~v~~v~~~p~~~-~~~t 480 (513)
.. -...|+|||+.|+.. ..+..|++||+.+++... +..+.. .+..++|+|++. ++.+
T Consensus 290 ~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~ 368 (388)
T 3pe7_A 290 SNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHR-VARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFT 368 (388)
T ss_dssp ECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEE-EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEE
T ss_pred ecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEE-eccccCcccccccccccCCCCccCCCCCCEEEEE
Confidence 00 003688999988754 456789999999987643 444444 478899999964 4444
Q ss_pred eC
Q 037288 481 IE 482 (513)
Q Consensus 481 ~~ 482 (513)
+.
T Consensus 369 s~ 370 (388)
T 3pe7_A 369 SD 370 (388)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 165
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.43 E-value=1.7e-10 Score=110.02 Aligned_cols=226 Identities=8% Similarity=-0.038 Sum_probs=148.7
Q ss_pred eEEeccccCcEEEEEEcCCCC-EEEEEe-CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 249 MHLVASFKCTVWTADFCTNPS-QAVIGT-NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~-~l~s~s-~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
+..+..+.....+++|+|+|+ +++++. +++|..||..++ ......+...+.+++++++|+++++...++.|.+||..
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 344556667789999999998 666664 567999999988 43333355669999999999988887778999999997
Q ss_pred CCccccccc-cccc-cCcCeEEEeeCC--eEEE-----eE------------------eecccCcccceeEeecCCCceE
Q 037288 327 KRQRGCSSR-AGRR-HRIPYSRLQRND--RVTN-----EQ------------------WFELKANIWPSHTTFMPSSISC 379 (513)
Q Consensus 327 ~~~~~~~~~-~~~~-h~~~v~~v~~~~--~~~s-----~~------------------w~~~~~~~~~~~~~~~~~~v~~ 379 (513)
+++... +. ...+ ....+..+++++ .++. +. |..... .. ...+........
T Consensus 99 ~g~~~~-~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~ 175 (296)
T 3e5z_A 99 GGEWES-IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPN 175 (296)
T ss_dssp TCCEEE-EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEE
T ss_pred CCcEEE-EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCc
Confidence 765432 11 1111 123456788887 3333 11 222221 11 111112222223
Q ss_pred EEEEcCCCCEEEEEecCCeEEEEecCCCCccce----EEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE
Q 037288 380 LQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAV----QSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGEL 455 (513)
Q Consensus 380 ~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~----~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~ 455 (513)
-++++|+++.+++.+.++.|.+||+. ..+.+ ..+..+...... ++++++|+++++. ++.|.+||.. ++.
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~--~~g~~~~~~~~~~~~~~~p~~--i~~d~~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLN--ARGETEYQGVHFTVEPGKTDG--LRVDAGGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEEC--SSSCEEEEEEEECCSSSCCCS--EEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEEC--CCCcCcCCCeEeeCCCCCCCe--EEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence 35789999988777778999999985 22222 333333333344 7889999876666 8899999986 788
Q ss_pred EEEecCCCCCeEEEEE-cCC-CceEEeeCCCee
Q 037288 456 VFEDKFSNSVPSAVCW-RTQ-RSMGPQIEGKIH 486 (513)
Q Consensus 456 ~~~~~~~~~~v~~v~~-~p~-~~~~~t~~~~~~ 486 (513)
+..+..+.. +++++| .|+ ..+++++...+.
T Consensus 249 ~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~ 280 (296)
T 3e5z_A 249 LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFW 280 (296)
T ss_dssp EEEEECSSC-CCEEEEESTTSCEEEEEETTEEE
T ss_pred EEEEECCCC-ceeEEEECCCCCEEEEEcCCeEE
Confidence 888777666 899999 577 456666665554
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.42 E-value=1.3e-11 Score=131.77 Aligned_cols=190 Identities=9% Similarity=-0.011 Sum_probs=129.0
Q ss_pred ccCcEEEEEEcCCCCEEEEEeCC-----------eEEEEECCC------CcEEEEe-eeCCCeEEEEEecCCcEEEEEeC
Q 037288 255 FKCTVWTADFCTNPSQAVIGTNL-----------GAAMVDMET------GMASWVC-RSKSDILAQQVIHSGNVVLCGFR 316 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~s~~-----------~i~vwd~~~------~~~~~~~-~~~~~V~~l~~~~~~~~l~sg~~ 316 (513)
|...+..++|+|||+.|++++.+ .|.+||+.+ +....+. .+...+.+++|+|||+.|+.++.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEEC
Confidence 66788999999999999877543 589999998 6665555 55666889999999999888775
Q ss_pred C--------CeEEEEECC-CCccccccccc-cccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCC
Q 037288 317 N--------GAIVTVDVR-KRQRGCSSRAG-RRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLY 386 (513)
Q Consensus 317 d--------g~i~iwd~~-~~~~~~~~~~~-~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 386 (513)
+ ..|++||+. ++.... ...+ .+|...+.. ..|+|+
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~-~~~l~~~~~~~~~~----------------------------------~~~spd 252 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFAD-TRTLLGGPEEAIAQ----------------------------------AEWAPD 252 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEE-EEEEEEETTBCEEE----------------------------------EEECTT
T ss_pred CCCCCCCCCcEEEEEEECCCCcccc-cEEeCCCCCceEcc----------------------------------eEECCC
Confidence 5 379999998 442111 1122 122333333 367789
Q ss_pred CCEEEEEecCC--eEEEEecCCCCccceEEecCCCCcee-------EEEEEEcCCCCEEEEEeCCCcEEEE--eCCCCeE
Q 037288 387 DQYFLASSMDG--TVKLYDHRLTTRGAVQSYEGHVNSHT-------RIQLGVDQSERFVMSGGEDCKLRIW--SIRSGEL 455 (513)
Q Consensus 387 ~~~l~s~s~dg--~i~lwd~~~~~~~~~~~~~~h~~~v~-------~~~~~~s~~g~~l~sg~~Dg~v~vw--d~~~~~~ 455 (513)
|+++++++.++ .|.+||+. .+....+..+...+. ...++|+++++++++++. +.++|| |+.+++
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~---~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~- 327 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPA---TGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE- 327 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTT---TCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-
T ss_pred CeEEEEECCCCCeEEEEEECC---CCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-
Confidence 99888888888 55556653 233333333322211 123788899999999998 999999 655666
Q ss_pred EEEecCCCCCeEEE-EEcCCCceEEeeCCC
Q 037288 456 VFEDKFSNSVPSAV-CWRTQRSMGPQIEGK 484 (513)
Q Consensus 456 ~~~~~~~~~~v~~v-~~~p~~~~~~t~~~~ 484 (513)
+..+..+...+..+ +++++..++++.+.+
T Consensus 328 ~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~ 357 (662)
T 3azo_A 328 LVDAAGPWTEWAATLTVSGTRAVGVAASPR 357 (662)
T ss_dssp EEECCSSCCEEEEEEEEETTEEEEEEEETT
T ss_pred EEEecCCCCeEEEEEecCCCEEEEEEcCCC
Confidence 56777777777777 666666666665544
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.42 E-value=1.2e-11 Score=133.78 Aligned_cols=239 Identities=6% Similarity=-0.141 Sum_probs=139.4
Q ss_pred ccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee--eCCCe--
Q 037288 224 GSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR--SKSDI-- 299 (513)
Q Consensus 224 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~--~~~~V-- 299 (513)
+.+++|++.+... ..+..|...+...+|||||+.||.+.++.|.+||+.++....+.. +...+
T Consensus 92 ~~~~~~d~~~~~~-------------~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~ 158 (740)
T 4a5s_A 92 ASYDIYDLNKRQL-------------ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYN 158 (740)
T ss_dssp EEEEEEETTTTEE-------------CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEE
T ss_pred eEEEEEECCCCcE-------------EEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceec
Confidence 5566777664322 225567778999999999999999999999999999887654332 22222
Q ss_pred ---------------EEEEEecCCcEEEEEeCCC-eEEEEECCCCccccccccccccCcCeEEEeeCC------eEEEeE
Q 037288 300 ---------------LAQQVIHSGNVVLCGFRNG-AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND------RVTNEQ 357 (513)
Q Consensus 300 ---------------~~l~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~------~~~s~~ 357 (513)
.++.|+|||+.|+.++.|. .+.+|++...... ..+...+..+.+.. ..-..-
T Consensus 159 g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~------~~~~~~~~~~~yp~~G~~~~~~~l~v 232 (740)
T 4a5s_A 159 GITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE------SLQYPKTVRVPYPKAGAVNPTVKFFV 232 (740)
T ss_dssp SBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST------TCSSCEEEEEECCBTTSCCCEEEEEE
T ss_pred CcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC------CCCCCcceeecCCCCcCcCCeeEEEE
Confidence 3589999999888876554 4777776322110 01222333333322 111122
Q ss_pred eeccc---CcccceeEeec------CCCceEEEEEcCCCCEEEEEec----CCeEEEEecCCCC----ccceEEe--cCC
Q 037288 358 WFELK---ANIWPSHTTFM------PSSISCLQSLQLYDQYFLASSM----DGTVKLYDHRLTT----RGAVQSY--EGH 418 (513)
Q Consensus 358 w~~~~---~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~s~----dg~i~lwd~~~~~----~~~~~~~--~~h 418 (513)
|++.. +.......+.. .........|+|+|+.++.... +..|.+||+...+ ...+..+ .+|
T Consensus 233 ~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~ 312 (740)
T 4a5s_A 233 VNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMST 312 (740)
T ss_dssp EETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECS
T ss_pred EECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccC
Confidence 66665 42111122221 2222333578899997766543 2369999986322 1112222 456
Q ss_pred CCcee---EEEEEEcCCCCEEE-EEeC-C--CcEEEEeCCCCeEEEEecCCCCCeEEEE-EcCCCceEEeeCC
Q 037288 419 VNSHT---RIQLGVDQSERFVM-SGGE-D--CKLRIWSIRSGELVFEDKFSNSVPSAVC-WRTQRSMGPQIEG 483 (513)
Q Consensus 419 ~~~v~---~~~~~~s~~g~~l~-sg~~-D--g~v~vwd~~~~~~~~~~~~~~~~v~~v~-~~p~~~~~~t~~~ 483 (513)
...+. .....|+|||+.|+ ..+. + ..|++||+.+++... +......+..+. ++ ++.++.++..
T Consensus 313 ~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~~d-~~~i~f~~~~ 383 (740)
T 4a5s_A 313 TGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEALT-SDYLYYISNE 383 (740)
T ss_dssp SSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEEEC-SSEEEEEESC
T ss_pred CceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEEEe-CCEEEEEEec
Confidence 55443 12368999999877 6654 3 468889988776654 333344455544 44 4444444443
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.40 E-value=1.3e-10 Score=112.79 Aligned_cols=219 Identities=9% Similarity=-0.013 Sum_probs=152.0
Q ss_pred CcEEEEEEcCCCCEEEEEeCC-------------------------eEEEEECCCCcEEEEeee--CCCeEEEEEecCCc
Q 037288 257 CTVWTADFCTNPSQAVIGTNL-------------------------GAAMVDMETGMASWVCRS--KSDILAQQVIHSGN 309 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~-------------------------~i~vwd~~~~~~~~~~~~--~~~V~~l~~~~~~~ 309 (513)
..+.+++++++|+++++...+ .|.+||..+++....... -.....++++++|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 679999999999999887655 599999999988766552 24689999999999
Q ss_pred EEEEEeCCCeEEEEECCCCccccccccc---------cccCcCeEEEeeCC----eEEEeE--------eecccCcccce
Q 037288 310 VVLCGFRNGAIVTVDVRKRQRGCSSRAG---------RRHRIPYSRLQRND----RVTNEQ--------WFELKANIWPS 368 (513)
Q Consensus 310 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~---------~~h~~~v~~v~~~~----~~~s~~--------w~~~~~~~~~~ 368 (513)
++++...++.|++||....... +..+ .++......+++++ .+++.+ |+ ..+...
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~--~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~-- 178 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGP--LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV-- 178 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCC--SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE--
T ss_pred EEEEECCCCEEEEEeCCCCeEE--EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE--
Confidence 9988888999999998654211 2222 34555788999986 333332 33 222211
Q ss_pred eEeecC-----------CCceEEEEEcCC-CCEEEEEecCCeEEEEecCCCCccceEEec--CCCCceeEEEEEEcC---
Q 037288 369 HTTFMP-----------SSISCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQSYE--GHVNSHTRIQLGVDQ--- 431 (513)
Q Consensus 369 ~~~~~~-----------~~v~~~~~~~~~-~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~--~h~~~v~~~~~~~s~--- 431 (513)
..+... ..... ++++++ ++++++...++.|++||.. ....+..+. .+...+.. ++++|
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~g-ia~d~~~g~l~v~d~~~~~I~~~~~~--~G~~~~~~~~~~~~~~~~~--~~~~pg~~ 253 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHS-LALVPHLDQLCVADRENGRIQCFKTD--TKEFVREIKHASFGRNVFA--ISYIPGFL 253 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEE-EEEETTTTEEEEEETTTTEEEEEETT--TCCEEEEECCTTTTTCEEE--EEEETTEE
T ss_pred EEeccCCCCCCCCCcccCCCcE-EEEECCCCEEEEEECCCCEEEEEECC--CCcEEEEEeccccCCCcce--eeecCCEE
Confidence 111111 11334 477887 7777777889999999985 345666664 34444444 78888
Q ss_pred ---CCCEEEEEeCCCcEEEEeCCCCeEEEEec---CCCCCeEEEEEcCCCceEEeeCCCe
Q 037288 432 ---SERFVMSGGEDCKLRIWSIRSGELVFEDK---FSNSVPSAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 432 ---~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~~t~~~~~ 485 (513)
+|+..++...+..|++|++.+++.+..+. .+...+.+++++|++.++++...+-
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred EEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 33333333445689999999999998873 5566789999999998888876553
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.40 E-value=2.1e-10 Score=112.99 Aligned_cols=168 Identities=10% Similarity=-0.004 Sum_probs=109.2
Q ss_pred ccCcEEEEEEcCCCCEEEEEe--CCeEEEEECC-CCcEEE--Eee---eCCCeEEEEEecCCcEEEEEeC-CCeEEEEEC
Q 037288 255 FKCTVWTADFCTNPSQAVIGT--NLGAAMVDME-TGMASW--VCR---SKSDILAQQVIHSGNVVLCGFR-NGAIVTVDV 325 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~s--~~~i~vwd~~-~~~~~~--~~~---~~~~V~~l~~~~~~~~l~sg~~-dg~i~iwd~ 325 (513)
+...+.+++|+|+|++++++. ++.|.+||+. +++... .+. +...+..++|+|||+.|++++. ++.|.+|++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 456899999999999887664 4679999998 776532 232 2456899999999998887765 789999987
Q ss_pred CC--Ccccc---ccccccc----cCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEE-EcCCCCEEEEEec
Q 037288 326 RK--RQRGC---SSRAGRR----HRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQS-LQLYDQYFLASSM 395 (513)
Q Consensus 326 ~~--~~~~~---~~~~~~~----h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~s~s~ 395 (513)
.. ++... .+..+.. |..++. ....+.. +. ++|+|++|++++.
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~---------------------------~~~~~~~-i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 223 DPATHMPVYTHHSFPLIPPGIPDRDPETG---------------------------KGLYRAD-VCALTFSGKYMFASSR 274 (365)
T ss_dssp CTTTCCEEEEEEEEESSCTTCCCBCTTTS---------------------------SBSEEEE-EEEECTTSSEEEEEEE
T ss_pred eCCCCcEEEccceEEcCCCCcCCcccccc---------------------------ccccccc-EEEECCCCCEEEEECC
Confidence 63 32110 0111111 110000 0001223 35 8899998887765
Q ss_pred CC------eEEEEecCCCCccceE----EecCCCCceeEEEEEEcC---CCCEEEEEeCC-CcEEEEeCCCCe
Q 037288 396 DG------TVKLYDHRLTTRGAVQ----SYEGHVNSHTRIQLGVDQ---SERFVMSGGED-CKLRIWSIRSGE 454 (513)
Q Consensus 396 dg------~i~lwd~~~~~~~~~~----~~~~h~~~v~~~~~~~s~---~g~~l~sg~~D-g~v~vwd~~~~~ 454 (513)
+. .|.+|++. ..+.+. ....+...... ++|+| +|++|++++.+ +.|.+|++....
T Consensus 275 ~~~~~~~~~i~v~~~~--~~g~~~~~~~~~~~~~~~~~~--~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 275 ANKFELQGYIAGFKLR--DCGSIEKQLFLSPTPTSGGHS--NAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp ESSTTSCCEEEEEEEC--TTSCEEEEEEEEECSSCCTTC--CCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred CCCCCCCCeEEEEEEC--CCCCEEEeeeeeecCCCCccc--ceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 33 89999995 233222 13333333334 78899 89999999875 899999987763
No 170
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=1.1e-11 Score=121.53 Aligned_cols=173 Identities=16% Similarity=0.168 Sum_probs=128.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCeEEEEECCCCc-----------EEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 258 TVWTADFCTNPSQAVIGTNLGAAMVDMETGM-----------ASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~-----------~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
.++.+++++...++++|+.+++++|++...+ ......+.. |+.++| |+++|+++ .++.|++||++
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 6899999999999999999999999865332 223445666 999999 89999999 88999999998
Q ss_pred CCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCC
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRL 406 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~ 406 (513)
+..... ....|..++. .+....|+ +++++.||.|.+||+.
T Consensus 115 sl~~~~---~~~~~~~~v~---------------------------------~i~~~~p~---~av~~~dG~L~v~dl~- 154 (388)
T 1xip_A 115 ELSEFR---TVTSFEKPVF---------------------------------QLKNVNNT---LVILNSVNDLSALDLR- 154 (388)
T ss_dssp STTCEE---EEEECSSCEE---------------------------------EEEECSSE---EEEEETTSEEEEEETT-
T ss_pred hhhccC---ccceeeccee---------------------------------eEEecCCC---EEEEECCCCEEEEEcc-
Confidence 765322 3333333333 33344432 8889999999999996
Q ss_pred CCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--EEEe------c---CCCCCeEEEEEcCCC
Q 037288 407 TTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGEL--VFED------K---FSNSVPSAVCWRTQR 475 (513)
Q Consensus 407 ~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~--~~~~------~---~~~~~v~~v~~~p~~ 475 (513)
...... +...|++ ++|+|+| ++.|..||++++|+...++. ..++ . .|...|.+++|.+++
T Consensus 155 -~~~~~~----~~~~Vs~--v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~ 225 (388)
T 1xip_A 155 -TKSTKQ----LAQNVTS--FDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ 225 (388)
T ss_dssp -TCCEEE----EEESEEE--EEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred -CCcccc----ccCCceE--EEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence 333322 3345666 9999999 78899999999999988885 5555 2 256789999999998
Q ss_pred ceEEeeCC
Q 037288 476 SMGPQIEG 483 (513)
Q Consensus 476 ~~~~t~~~ 483 (513)
.++++-..
T Consensus 226 ~flv~y~~ 233 (388)
T 1xip_A 226 DFLAVFGN 233 (388)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEcC
Confidence 87776443
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.36 E-value=1e-09 Score=106.34 Aligned_cols=225 Identities=8% Similarity=0.030 Sum_probs=148.6
Q ss_pred eEEeccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEe-eeCCCeEEEEEecCCcEEEEEeCC----CeEEE
Q 037288 249 MHLVASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVC-RSKSDILAQQVIHSGNVVLCGFRN----GAIVT 322 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~-~~~~~V~~l~~~~~~~~l~sg~~d----g~i~i 322 (513)
...+..+...+.+++|+++|++++++. +++|.+||..+++..... .+...+.+++|+++|+++++...+ +.|.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 344566667789999999999887775 456999999988866554 355679999999999988887666 68999
Q ss_pred EECCCCccccccccccccCcCeEEEeeCC--eEEEeE------------eecc--cCcccceeEeecCCCceEEEEEcCC
Q 037288 323 VDVRKRQRGCSSRAGRRHRIPYSRLQRND--RVTNEQ------------WFEL--KANIWPSHTTFMPSSISCLQSLQLY 386 (513)
Q Consensus 323 wd~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~s~~------------w~~~--~~~~~~~~~~~~~~~v~~~~~~~~~ 386 (513)
||........ +..-..+...+..+.+++ .++.+. |... .+... ........... ..++++
T Consensus 117 ~d~~~~~~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~-i~~~~d 192 (333)
T 2dg1_A 117 ATENGDNLQD-IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT--PIIQNISVANG-IALSTD 192 (333)
T ss_dssp ECTTSCSCEE-EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE--EEEEEESSEEE-EEECTT
T ss_pred EeCCCCEEEE-EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE--EeecCCCcccc-eEECCC
Confidence 9988765431 111113445788899988 333322 2221 11111 11111122333 478899
Q ss_pred CCEEEE-EecCCeEEEEecCCCCcc-ceE--------EecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE
Q 037288 387 DQYFLA-SSMDGTVKLYDHRLTTRG-AVQ--------SYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELV 456 (513)
Q Consensus 387 ~~~l~s-~s~dg~i~lwd~~~~~~~-~~~--------~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~ 456 (513)
++.|++ .+.++.|.+||+. ..+ .+. .+.++ .... .++++++|+++++...++.|.+||. +++.+
T Consensus 193 g~~l~v~~~~~~~i~~~d~~--~~g~~~~~~~~~~~~~~~~~-~~~~--~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~ 266 (333)
T 2dg1_A 193 EKVLWVTETTANRLHRIALE--DDGVTIQPFGATIPYYFTGH-EGPD--SCCIDSDDNLYVAMYGQGRVLVFNK-RGYPI 266 (333)
T ss_dssp SSEEEEEEGGGTEEEEEEEC--TTSSSEEEEEEEEEEECCSS-SEEE--EEEEBTTCCEEEEEETTTEEEEECT-TSCEE
T ss_pred CCEEEEEeCCCCeEEEEEec--CCCcCcccccceEEEecCCC-CCCC--ceEECCCCCEEEEEcCCCEEEEECC-CCCEE
Confidence 986654 4567899999985 221 221 12222 2333 3889999998888888899999998 57777
Q ss_pred EEecCCCC------CeEEEEEcCCC-ceEEeeCC
Q 037288 457 FEDKFSNS------VPSAVCWRTQR-SMGPQIEG 483 (513)
Q Consensus 457 ~~~~~~~~------~v~~v~~~p~~-~~~~t~~~ 483 (513)
..+..+.. .+.+++|+|++ .+++++..
T Consensus 267 ~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 267 GQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 77654432 58899999984 66666554
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.35 E-value=9.3e-10 Score=104.10 Aligned_cols=214 Identities=13% Similarity=0.074 Sum_probs=145.0
Q ss_pred cccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEeee-------CCCeEEEEEe-cCCcEEEEEeC-CCeEEEE
Q 037288 254 SFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCRS-------KSDILAQQVI-HSGNVVLCGFR-NGAIVTV 323 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~~-------~~~V~~l~~~-~~~~~l~sg~~-dg~i~iw 323 (513)
++-....++++++++.++++.. ++.|.+||.. ++....+.. ...+.++++. ++++++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 4456789999999999888764 5679999987 555555432 2458899995 67777766643 8999999
Q ss_pred ECCCCcccccccccc-ccCcCeEEEeeCC--eEEEeE--------eecccCcccceeEeec---CCCceEEEEEcCCCCE
Q 037288 324 DVRKRQRGCSSRAGR-RHRIPYSRLQRND--RVTNEQ--------WFELKANIWPSHTTFM---PSSISCLQSLQLYDQY 389 (513)
Q Consensus 324 d~~~~~~~~~~~~~~-~h~~~v~~v~~~~--~~~s~~--------w~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~ 389 (513)
|. +++. +..+. .+...+..+++++ .++.+. |+.. +.. ...+.. ...+.. +++++++++
T Consensus 106 d~-~g~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~--~~~~~~~~~~~~p~~-i~~~~~g~l 177 (286)
T 1q7f_A 106 NQ-YGQF---VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNV--LHKFGCSKHLEFPNG-VVVNDKQEI 177 (286)
T ss_dssp CT-TSCE---EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE--EEEEECTTTCSSEEE-EEECSSSEE
T ss_pred CC-CCcE---EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCE--EEEeCCCCccCCcEE-EEECCCCCE
Confidence 94 3433 22332 3445678899987 343332 4422 221 122221 123444 478889998
Q ss_pred EEEEecCCeEEEEecCCCCccceEEecCC--CCceeEEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCeEEEEecCCC--C
Q 037288 390 FLASSMDGTVKLYDHRLTTRGAVQSYEGH--VNSHTRIQLGVDQSERFVMSGGEDC-KLRIWSIRSGELVFEDKFSN--S 464 (513)
Q Consensus 390 l~s~s~dg~i~lwd~~~~~~~~~~~~~~h--~~~v~~~~~~~s~~g~~l~sg~~Dg-~v~vwd~~~~~~~~~~~~~~--~ 464 (513)
+++...++.|++||.. ...+..+..+ ...... ++++++|+++++...++ .|.+||. +++.+..+..+. .
T Consensus 178 ~v~~~~~~~i~~~~~~---g~~~~~~~~~g~~~~p~~--i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~ 251 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYE---GQYLRQIGGEGITNYPIG--VGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHA 251 (286)
T ss_dssp EEEEGGGTEEEEEETT---CCEEEEESCTTTSCSEEE--EEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCS
T ss_pred EEEECCCCEEEEEcCC---CCEEEEEccCCccCCCcE--EEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCC
Confidence 8887889999999973 4456666543 234444 88999999888888776 9999995 566666665433 3
Q ss_pred CeEEEEEcCCCceEEeeC
Q 037288 465 VPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 465 ~v~~v~~~p~~~~~~t~~ 482 (513)
.+.+++++|++.+++++.
T Consensus 252 ~~~~i~~~~~g~l~vs~~ 269 (286)
T 1q7f_A 252 QCFDVALMDDGSVVLASK 269 (286)
T ss_dssp CEEEEEEETTTEEEEEET
T ss_pred cceeEEECCCCcEEEECC
Confidence 478999999988888864
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.35 E-value=4.3e-11 Score=118.56 Aligned_cols=189 Identities=9% Similarity=0.013 Sum_probs=127.1
Q ss_pred eEEeccccCcEEE-----EEEcCCCCEEEEEeC-Ce---EEEEECCCCcEEEEeeeCCC-eEEEEEecCCcEEEEEeCCC
Q 037288 249 MHLVASFKCTVWT-----ADFCTNPSQAVIGTN-LG---AAMVDMETGMASWVCRSKSD-ILAQQVIHSGNVVLCGFRNG 318 (513)
Q Consensus 249 ~~~~~~h~~~V~~-----~~~s~~g~~l~s~s~-~~---i~vwd~~~~~~~~~~~~~~~-V~~l~~~~~~~~l~sg~~dg 318 (513)
+..+..|...+.. .+|+|||+.|+.+++ ++ |.+||+.+++...+...... +.++.|+|||+.|+.++.++
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~ 102 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGR 102 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTT
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCC
Confidence 3445566655655 889999999987765 44 88899999987776664443 45788999999999999999
Q ss_pred eEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEE-----
Q 037288 319 AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLAS----- 393 (513)
Q Consensus 319 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~----- 393 (513)
.|++||+.+++... .+..+...+.... ..+++++.+++..
T Consensus 103 ~l~~~d~~~g~~~~---~~~~~~~~~~~~~--------------------------------~~~~~dg~~l~~~~~~~~ 147 (388)
T 3pe7_A 103 NLMRVDLATLEENV---VYQVPAEWVGYGT--------------------------------WVANSDCTKLVGIEIRRE 147 (388)
T ss_dssp EEEEEETTTCCEEE---EEECCTTEEEEEE--------------------------------EEECTTSSEEEEEEEEGG
T ss_pred eEEEEECCCCccee---eeechhhcccccc--------------------------------eeECCCCCeeccccccCc
Confidence 99999999876432 1111211111111 1246777777642
Q ss_pred -----------------ecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcC-CCCEEEEEeCC------CcEEEEe
Q 037288 394 -----------------SMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQ-SERFVMSGGED------CKLRIWS 449 (513)
Q Consensus 394 -----------------s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~-~g~~l~sg~~D------g~v~vwd 449 (513)
..+..|.+||+. .+....+..+...+.. +.|+| ||+.|+....+ ..|.++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~d~~---~g~~~~l~~~~~~~~~--~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d 222 (388)
T 3pe7_A 148 DWVPLTDWKKFHEFYFTKPCCRLMRVDLK---TGESTVILQENQWLGH--PIYRPYDDSTVAFCHEGPHDLVDARMWLIN 222 (388)
T ss_dssp GCCCCCSHHHHHHHGGGCCCEEEEEEETT---TCCEEEEEEESSCEEE--EEEETTEEEEEEEEECSCTTTSSCSEEEEE
T ss_pred ccccccccchhhhhhccCCcceEEEEECC---CCceEEeecCCccccc--cEECCCCCCEEEEEEecCCCCCcceEEEEe
Confidence 234679999985 3344455455555544 88999 99998877753 3788888
Q ss_pred CCCCeEEEEecCCC-CCeEEEEEcCCCce
Q 037288 450 IRSGELVFEDKFSN-SVPSAVCWRTQRSM 477 (513)
Q Consensus 450 ~~~~~~~~~~~~~~-~~v~~v~~~p~~~~ 477 (513)
+.+++......... ..+..++|+|++..
T Consensus 223 ~~~~~~~~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 223 EDGTNMRKVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp TTSCCCEESCCCCTTEEEEEEEECTTSSC
T ss_pred CCCCceEEeeeCCCCcccccceECCCCCE
Confidence 87665433333222 35788999999653
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.34 E-value=4.2e-10 Score=121.08 Aligned_cols=220 Identities=7% Similarity=-0.106 Sum_probs=144.6
Q ss_pred cccCcEEEEEEcCCCCEEEEEeC-C-----eEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCe--------
Q 037288 254 SFKCTVWTADFCTNPSQAVIGTN-L-----GAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGA-------- 319 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~s~s~-~-----~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~-------- 319 (513)
+|...+..++|||||++||.+.+ + .|++||+.+++..........+.+++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccc
Confidence 35457889999999999986632 2 699999999987654333334778999999999998888766
Q ss_pred --------EEEEECCCCcccc-ccccccccCcCeEEEeeCC---eEEEeE------------eeccc------Cccccee
Q 037288 320 --------IVTVDVRKRQRGC-SSRAGRRHRIPYSRLQRND---RVTNEQ------------WFELK------ANIWPSH 369 (513)
Q Consensus 320 --------i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~~---~~~s~~------------w~~~~------~~~~~~~ 369 (513)
|++|++.++.... .+.....|...+..+.|+| .++..+ |+... +......
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 9999998775321 0112333566688899999 333332 33333 2111111
Q ss_pred EeecCCCceEEEEEcCCCCEEEEEecC----CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCc-
Q 037288 370 TTFMPSSISCLQSLQLYDQYFLASSMD----GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCK- 444 (513)
Q Consensus 370 ~~~~~~~v~~~~~~~~~~~~l~s~s~d----g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~- 444 (513)
...+...+.. .++++|..|+..+.+ +.|.+||+..........+..|........++|++++.++++...|+.
T Consensus 282 l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 282 LIDNFEGEYD--YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN 359 (710)
T ss_dssp EECSSSSCEE--EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEE
T ss_pred eeCCCCcEEE--EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEE
Confidence 2222233333 466788887766653 359999986221113455655654212223777777888888888884
Q ss_pred -EEEEeCCCCeEEEEecCCCCCeEEEEEcCCC
Q 037288 445 -LRIWSIRSGELVFEDKFSNSVPSAVCWRTQR 475 (513)
Q Consensus 445 -v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~ 475 (513)
|++|++.+++.+..+..+...+..++++|++
T Consensus 360 ~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~ 391 (710)
T 2xdw_A 360 TLQLHDLATGALLKIFPLEVGSVVGYSGQKKD 391 (710)
T ss_dssp EEEEEETTTCCEEEEECCCSSEEEEEECCTTC
T ss_pred EEEEEECCCCCEEEecCCCCceEEEEecCCCC
Confidence 6667877888878877777778889999885
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.31 E-value=5.9e-10 Score=105.11 Aligned_cols=184 Identities=9% Similarity=0.049 Sum_probs=132.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeC--CCeEEEEEecCCcEEEEEeC-CCeEEEEECCCCcccccc
Q 037288 258 TVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSK--SDILAQQVIHSGNVVLCGFR-NGAIVTVDVRKRQRGCSS 334 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~--~~V~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~ 334 (513)
.+.++++.|+|++++ +.+++|..||. +++.++.+... ..+.++.+.++|+++++.+. ++.|..+|. +++...
T Consensus 38 ~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~-- 112 (276)
T 3no2_A 38 ECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLS-- 112 (276)
T ss_dssp CCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEE--
T ss_pred CCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEE--
Confidence 456778899999888 55677999999 89998888753 46889999999999999887 788888876 343221
Q ss_pred ccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEE
Q 037288 335 RAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQS 414 (513)
Q Consensus 335 ~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~ 414 (513)
.+... .. . ...+ .... .+...++|+++++...++.|..||. +.+.+.+
T Consensus 113 -~~~~~---------------------~~-~----~~~~-~~~~-~v~~~~~G~~lv~~~~~~~v~~~d~---~G~~~w~ 160 (276)
T 3no2_A 113 -KTEFE---------------------TG-I----ERPH-AQFR-QINKNKKGNYLVPLFATSEVREIAP---NGQLLNS 160 (276)
T ss_dssp -EEEEC---------------------CS-C----SSGG-GSCS-CCEECTTSCEEEEETTTTEEEEECT---TSCEEEE
T ss_pred -EEecc---------------------CC-C----Cccc-cccc-CceECCCCCEEEEecCCCEEEEECC---CCCEEEE
Confidence 11000 00 0 0000 0000 1245679999999999999999997 4446777
Q ss_pred ecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCC------CCeEEEEEcCCCceEEee
Q 037288 415 YEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSN------SVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 415 ~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~------~~v~~v~~~p~~~~~~t~ 481 (513)
+..+... .. +.+.++|+.+++++.++.|..+|..+|+.+.++.... ..+..++..+++.+++++
T Consensus 161 ~~~~~~~-~~--~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 161 VKLSGTP-FS--SAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EECSSCC-CE--EEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EECCCCc-cc--eeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 7654332 33 5678999999999988899999999999999875432 227889999998887777
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.28 E-value=2e-10 Score=113.89 Aligned_cols=172 Identities=9% Similarity=-0.062 Sum_probs=111.6
Q ss_pred EEEcCCCCEEEEE------eCCeEEEEECCCCcEEEEeeeCCCeEEEEEec-CCcEEEEEeCC------CeEEEEECCCC
Q 037288 262 ADFCTNPSQAVIG------TNLGAAMVDMETGMASWVCRSKSDILAQQVIH-SGNVVLCGFRN------GAIVTVDVRKR 328 (513)
Q Consensus 262 ~~~s~~g~~l~s~------s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~-~~~~l~sg~~d------g~i~iwd~~~~ 328 (513)
++|+|+++.++.+ .+..|.+||+.+++...+..+...+..+.|+| ++..|+..+.+ ..|.+||+...
T Consensus 147 ~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 147 RDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp GGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSC
T ss_pred cccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCC
Confidence 4578888877643 23358999999998877777778899999999 78766655543 46888888655
Q ss_pred ccccccccccccC--cCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC-----CeEEE
Q 037288 329 QRGCSSRAGRRHR--IPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD-----GTVKL 401 (513)
Q Consensus 329 ~~~~~~~~~~~h~--~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d-----g~i~l 401 (513)
... .+..+. ..+.. ..|+|+|++|+.++.+ +.|++
T Consensus 227 ~~~----~l~~~~~~~~~~~----------------------------------~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 227 NVR----KIKEHAEGESCTH----------------------------------EFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp CCE----ESSCCCTTEEEEE----------------------------------EEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred cee----EeeccCCCccccc----------------------------------eEECCCCCEEEEEecCCCCccceEEE
Confidence 421 111111 11222 4678899988777654 45999
Q ss_pred EecCCCCccceEEecCCCCceeEEEEEEcC-CCCEEEEEe----------------CCCcEEEEeCCCCeEEEEecCCCC
Q 037288 402 YDHRLTTRGAVQSYEGHVNSHTRIQLGVDQ-SERFVMSGG----------------EDCKLRIWSIRSGELVFEDKFSNS 464 (513)
Q Consensus 402 wd~~~~~~~~~~~~~~h~~~v~~~~~~~s~-~g~~l~sg~----------------~Dg~v~vwd~~~~~~~~~~~~~~~ 464 (513)
||+. ... ...+..... . . ..|+| +|++|++++ .++.|++||+.+++... +..+..
T Consensus 269 ~d~~--~g~-~~~l~~~~~-~-~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~ 340 (396)
T 3c5m_A 269 ANPE--TLE-NEEVMVMPP-C-S--HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK-LCKHST 340 (396)
T ss_dssp ECTT--TCC-EEEEEECCS-E-E--EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCE-EEECCC
T ss_pred EECC--CCC-eEEeeeCCC-C-C--CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEE-ccCCCC
Confidence 9986 222 222221111 1 1 67899 999888765 34789999998887533 333332
Q ss_pred -----------CeEEEEEcCCCceEE
Q 037288 465 -----------VPSAVCWRTQRSMGP 479 (513)
Q Consensus 465 -----------~v~~v~~~p~~~~~~ 479 (513)
.+..++|+|++..++
T Consensus 341 ~~~~~~~~~~~~~~~~~~s~dg~~l~ 366 (396)
T 3c5m_A 341 SWDVLDGDRQITHPHPSFTPNDDGVL 366 (396)
T ss_dssp CCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred ccccccccccCCCCCceEccCCCeEE
Confidence 256789999965433
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.27 E-value=4.7e-10 Score=109.22 Aligned_cols=205 Identities=10% Similarity=-0.009 Sum_probs=133.5
Q ss_pred CcEEEEEEcCCCCEEEEEeC----Ce--EEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCC-------------
Q 037288 257 CTVWTADFCTNPSQAVIGTN----LG--AAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRN------------- 317 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~----~~--i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~d------------- 317 (513)
..+..++|+|||+.|+..++ +. |.+||+.+++...+..... +.+++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 46788999999999887643 23 8888999888777666655 9999999999888777642
Q ss_pred --------------CeEEEEECCCCccccccccccccCcCeEEEeeCC--eEEEeE--------------eecccCcccc
Q 037288 318 --------------GAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND--RVTNEQ--------------WFELKANIWP 367 (513)
Q Consensus 318 --------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~s~~--------------w~~~~~~~~~ 367 (513)
..|++||+.+++.. ..+.. . .+..+.|+| .++++. |....+..
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~---~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~-- 210 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVI---EEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKE-- 210 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEE---EEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEE--
T ss_pred ceeecCcccccCccceEEEEECCCCeEE---eeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCce--
Confidence 57999999877641 23333 2 677888888 233332 11111111
Q ss_pred eeEeecCCCceEEEEEcCCCCEEEEEecC--------CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEE
Q 037288 368 SHTTFMPSSISCLQSLQLYDQYFLASSMD--------GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSG 439 (513)
Q Consensus 368 ~~~~~~~~~v~~~~~~~~~~~~l~s~s~d--------g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg 439 (513)
..+.....+ ..++|+|++|+.++.+ ..|.+|| . ........+|...+.. .+.|+ ++ +++++
T Consensus 211 -~~l~~~~~~---~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~---~~~~~l~~~~~~~~~~-~~~~s-dg-~~~~~ 279 (347)
T 2gop_A 211 -EKMFEKVSF---YAVDSDGERILLYGKPEKKYMSEHNKLYIYD-G---KEVMGILDEVDRGVGQ-AKIKD-GK-VYFTL 279 (347)
T ss_dssp -EEEEEEESE---EEEEECSSCEEEEECCSSSCCCSSCEEEEEC-S---SCEEESSTTCCSEEEE-EEEET-TE-EEEEE
T ss_pred -EEeccCcce---eeECCCCCEEEEEEccccCCccccceEEEEC-C---CceEeccccCCcccCC-ccEEc-Cc-EEEEE
Confidence 111111122 2238899998887754 3677777 2 2222223444554432 26788 88 88999
Q ss_pred eCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCC
Q 037288 440 GEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 440 ~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
+.|+.++|| +.+++....+. +...|.+++|+| ..+++.++.
T Consensus 280 ~~~~~~~l~-~~~g~~~~~~~-~~~~v~~~~~s~-~~~~~~~~~ 320 (347)
T 2gop_A 280 FEEGSVNLY-IWDGEIKPIAK-GRHWIMGFDVDE-IVVYLKETA 320 (347)
T ss_dssp EETTEEEEE-EESSSEEEEEC-SSSEEEEEEESS-SEEEEEECS
T ss_pred ecCCcEEEE-EcCCceEEEec-CCCeEEeeeeeC-cEEEEEcCC
Confidence 999999999 88776644443 467799999999 555554443
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.25 E-value=2.7e-10 Score=112.90 Aligned_cols=211 Identities=7% Similarity=-0.114 Sum_probs=130.9
Q ss_pred EEEEEEcCCCCEEEEEeCC----eEEEEECCCCcEEEEeeeCCCeE-EEEEecCCcEEEEEeCCCeEEEEECCCCccccc
Q 037288 259 VWTADFCTNPSQAVIGTNL----GAAMVDMETGMASWVCRSKSDIL-AQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCS 333 (513)
Q Consensus 259 V~~~~~s~~g~~l~s~s~~----~i~vwd~~~~~~~~~~~~~~~V~-~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 333 (513)
+..++|+|||++|+...+. .|.+||+.+++...+..+...+. .+.|+|||+.|+.++.++.|++||+..++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~- 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV- 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE-
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE-
Confidence 6778999999998876432 58889999888766555444433 47899999999999999999999998776432
Q ss_pred cccccccCcCeEE-------------------EeeCC---eEE------------EeEeecccCcccceeEeecCCCceE
Q 037288 334 SRAGRRHRIPYSR-------------------LQRND---RVT------------NEQWFELKANIWPSHTTFMPSSISC 379 (513)
Q Consensus 334 ~~~~~~h~~~v~~-------------------v~~~~---~~~------------s~~w~~~~~~~~~~~~~~~~~~v~~ 379 (513)
....+...... +.|+| .++ .-.|+...+... ........+..
T Consensus 117 --~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~--~~~~~~~~~~~ 192 (396)
T 3c5m_A 117 --IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE--VIHQDTAWLGH 192 (396)
T ss_dssp --EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE--EEEEESSCEEE
T ss_pred --EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE--eeccCCccccc
Confidence 22222222211 22333 000 011555444322 12223334444
Q ss_pred EEEEcC-CCCEEEEEecC------CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC-----CcEEE
Q 037288 380 LQSLQL-YDQYFLASSMD------GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED-----CKLRI 447 (513)
Q Consensus 380 ~~~~~~-~~~~l~s~s~d------g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-----g~v~v 447 (513)
..++| ++..|+..+.+ ..|.+||+. ......+..+........+.|+|+|++|+.++.+ +.|++
T Consensus 193 -~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~---~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 193 -PIYRPFDDSTVGFCHEGPHDLVDARMWLVNED---GSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp -EEEETTEEEEEEEEECSCSSSCSCCCEEEETT---SCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred -ceECCCCCCEEEEEecCCCCCCCceEEEEECC---CCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence 46788 78877766643 358888874 3334444433322223448999999988777554 44999
Q ss_pred EeCCCCeEEEEecCCCCCeEEEEEcC-CCceEEee
Q 037288 448 WSIRSGELVFEDKFSNSVPSAVCWRT-QRSMGPQI 481 (513)
Q Consensus 448 wd~~~~~~~~~~~~~~~~v~~v~~~p-~~~~~~t~ 481 (513)
||+.+++........ . .. ++|+| ++.+++..
T Consensus 269 ~d~~~g~~~~l~~~~-~-~~-~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 269 ANPETLENEEVMVMP-P-CS-HLMSNFDGSLMVGD 300 (396)
T ss_dssp ECTTTCCEEEEEECC-S-EE-EEEECSSSSEEEEE
T ss_pred EECCCCCeEEeeeCC-C-CC-CCccCCCCceEEEe
Confidence 999988765433222 1 33 89999 87666654
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.24 E-value=2.4e-10 Score=121.81 Aligned_cols=192 Identities=10% Similarity=-0.015 Sum_probs=130.5
Q ss_pred EeccccCcEEEEEEcCCCCEEEEE--e-CCeEEEEEC-CCCcEEEEeeeCCCeE---------EEEEe--cCCcE-EEEE
Q 037288 251 LVASFKCTVWTADFCTNPSQAVIG--T-NLGAAMVDM-ETGMASWVCRSKSDIL---------AQQVI--HSGNV-VLCG 314 (513)
Q Consensus 251 ~~~~h~~~V~~~~~s~~g~~l~s~--s-~~~i~vwd~-~~~~~~~~~~~~~~V~---------~l~~~--~~~~~-l~sg 314 (513)
.+.+|...|..+++++++.+++.. + ++...||.. ..+....+..+...+. +..|+ |||+. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 367889999999999876666665 2 345888884 4444544444555555 66676 99987 6655
Q ss_pred eC-CCeEEEEECC--C-Cccccccccccc-----cCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC
Q 037288 315 FR-NGAIVTVDVR--K-RQRGCSSRAGRR-----HRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL 385 (513)
Q Consensus 315 ~~-dg~i~iwd~~--~-~~~~~~~~~~~~-----h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~ 385 (513)
+. +..|.++++. . +.. ..+.. |...+.. ..|+|
T Consensus 98 ~~~~~~l~~~~~~~~g~~~~----~~l~~~~~~~~~~~~~~----------------------------------~~~sp 139 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAVP----RPLTPVSAVGGGLRWAD----------------------------------PVLLP 139 (662)
T ss_dssp BTTTCCEEEECTTSTTCCCC----EECSCCCCSTTCEEEEE----------------------------------EEEET
T ss_pred ECCCCeEEEEcCCCCCCCCC----EeccCCccCCCCccccC----------------------------------cEECC
Confidence 43 6677777775 2 332 12222 3233333 46788
Q ss_pred CCCEEEEEecC----------CeEEEEecCCCCc-----cceEEec-CCCCceeEEEEEEcCCCCEEEEEeCC-------
Q 037288 386 YDQYFLASSMD----------GTVKLYDHRLTTR-----GAVQSYE-GHVNSHTRIQLGVDQSERFVMSGGED------- 442 (513)
Q Consensus 386 ~~~~l~s~s~d----------g~i~lwd~~~~~~-----~~~~~~~-~h~~~v~~~~~~~s~~g~~l~sg~~D------- 442 (513)
+|+.|++++.| ..|++||+. .. +....+. .+...+.. ++|+|||++|+.++.+
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~--~~~SpDG~~la~~~~~~~~~~~~ 215 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLD--GSAAADRSAVRELSDDAHRFVTG--PRLSPDGRQAVWLAWDHPRMPWE 215 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETT--STTTTCGGGSEESSCSCSSEECC--CEECTTSSEEEEEEECTTCCTTT
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECC--CCccccCCceeEEEecCCCcccC--ceECCCCCEEEEEECCCCCCCCC
Confidence 99999988877 589999986 21 4445555 55555544 7899999999988755
Q ss_pred -CcEEEEeCC-CC---eEEEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 443 -CKLRIWSIR-SG---ELVFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 443 -g~v~vwd~~-~~---~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
..|++||+. ++ +.......+...+..++|+|++.++++++.+
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT 262 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTT
T ss_pred CcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCC
Confidence 379999999 57 4444444556779999999997666666554
No 180
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.19 E-value=9.4e-09 Score=97.94 Aligned_cols=190 Identities=11% Similarity=0.044 Sum_probs=123.6
Q ss_pred ccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeC-----CCeEEEEEecCCcEEEEEeCC---------CeE
Q 037288 255 FKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSK-----SDILAQQVIHSGNVVLCGFRN---------GAI 320 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~-----~~V~~l~~~~~~~~l~sg~~d---------g~i 320 (513)
+...+.+++++++|+++++ .+++|.+||..+++...+.... ..+..++++|+|+++++...+ ...
T Consensus 52 ~~~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVAT-IGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEE-ETTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CCCceEEEEECCCCCEEEE-ECCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 3467899999999995554 5778999999988765444321 237889999999976654322 223
Q ss_pred EEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEE-EEecCCeE
Q 037288 321 VTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFL-ASSMDGTV 399 (513)
Q Consensus 321 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~s~dg~i 399 (513)
.+|.+....... .+..+. ....-.+++|+++.|+ +.+.++.|
T Consensus 131 ~l~~~d~~g~~~---~~~~~~----------------------------------~~pngi~~spdg~~lyv~~~~~~~i 173 (297)
T 3g4e_A 131 ALYSLFPDHHVK---KYFDQV----------------------------------DISNGLDWSLDHKIFYYIDSLSYSV 173 (297)
T ss_dssp EEEEECTTSCEE---EEEEEE----------------------------------SBEEEEEECTTSCEEEEEEGGGTEE
T ss_pred EEEEEECCCCEE---EEeecc----------------------------------ccccceEEcCCCCEEEEecCCCCcE
Confidence 444443221110 110000 0112247788998665 45567899
Q ss_pred EEEecCCCCcc-----ceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEc-C
Q 037288 400 KLYDHRLTTRG-----AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWR-T 473 (513)
Q Consensus 400 ~lwd~~~~~~~-----~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~-p 473 (513)
.+||+...... .+..+..+...... ++++++|++.++...++.|..||..+++.+..+..+...+++++|. |
T Consensus 174 ~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g--~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~ 251 (297)
T 3g4e_A 174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDG--MCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGK 251 (297)
T ss_dssp EEEEECTTTCCEEEEEEEEECCGGGCEEEE--EEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESG
T ss_pred EEEeccCCCCcccCcEEEEECCCCCCCCCe--eEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCC
Confidence 99997411211 12223323333334 7889999888887778899999999999999888776779999998 7
Q ss_pred C-CceEEeeCCC
Q 037288 474 Q-RSMGPQIEGK 484 (513)
Q Consensus 474 ~-~~~~~t~~~~ 484 (513)
+ ..+++|+..+
T Consensus 252 d~~~L~vt~~~~ 263 (297)
T 3g4e_A 252 NYSEMYVTCARD 263 (297)
T ss_dssp GGCEEEEEEBCT
T ss_pred CCCEEEEEcCCc
Confidence 7 5677776654
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.18 E-value=3.6e-09 Score=100.00 Aligned_cols=188 Identities=9% Similarity=0.027 Sum_probs=127.8
Q ss_pred cccCcEEEEEE-cCCCCEEEEEe--CCeEEEEECCCCcEEEEee--eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCC
Q 037288 254 SFKCTVWTADF-CTNPSQAVIGT--NLGAAMVDMETGMASWVCR--SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKR 328 (513)
Q Consensus 254 ~h~~~V~~~~~-s~~g~~l~s~s--~~~i~vwd~~~~~~~~~~~--~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 328 (513)
+|...+..+++ .+++.++++.. ++.|.+|| .+++.+..+. +...+.+++++++|+++++...++.|.+||....
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 152 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN 152 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC
Confidence 34467889999 57888777763 67799999 5566666554 2346899999999998888888899999997533
Q ss_pred ccccccccc--cccCcCeEEEeeCC--eEEEeE--------eecccCcccceeEeecC---CCceEEEEEcCCCCEEEEE
Q 037288 329 QRGCSSRAG--RRHRIPYSRLQRND--RVTNEQ--------WFELKANIWPSHTTFMP---SSISCLQSLQLYDQYFLAS 393 (513)
Q Consensus 329 ~~~~~~~~~--~~h~~~v~~v~~~~--~~~s~~--------w~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~s~ 393 (513)
. +..+ ..+...+..+++++ .++.+. |+.. +.. ...+... ..+.. ++++++|+++++.
T Consensus 153 -~---~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~--~~~~~~~g~~~~p~~-i~~d~~G~l~v~~ 224 (286)
T 1q7f_A 153 -V---LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQY--LRQIGGEGITNYPIG-VGINSNGEILIAD 224 (286)
T ss_dssp -E---EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCE--EEEESCTTTSCSEEE-EEECTTCCEEEEE
T ss_pred -E---EEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCE--EEEEccCCccCCCcE-EEECCCCCEEEEe
Confidence 2 2222 24455688999988 443332 5542 221 1222222 23444 4788899988888
Q ss_pred ecCC-eEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe
Q 037288 394 SMDG-TVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGE 454 (513)
Q Consensus 394 s~dg-~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~ 454 (513)
..++ .|.+||. ....+..+..+........++++|+|+++++ +.|+.|++|++....
T Consensus 225 ~~~~~~i~~~~~---~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 225 NHNNFNLTIFTQ---DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp CSSSCEEEEECT---TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred CCCCEEEEEECC---CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 8776 9999996 4446666655543323345889999987666 679999999986543
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.15 E-value=1.1e-08 Score=95.50 Aligned_cols=217 Identities=9% Similarity=-0.047 Sum_probs=134.3
Q ss_pred cEEEEEEcCCCCEEE-EE-eCCeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccccc
Q 037288 258 TVWTADFCTNPSQAV-IG-TNLGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSS 334 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~-s~-s~~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 334 (513)
...+++++++|++++ +. .++.|.+||..++....... ....+.+++++++|+++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~--- 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT--- 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE---
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe---
Confidence 678999999999777 53 45669999987654332211 234688999999999666655 899999998765432
Q ss_pred cccc-ccCcCeEEEeeCC--eEEEeE------eecccCcccceeEe-ecCCCceEEEEEcCCCCEEEEEecCCeEEEEec
Q 037288 335 RAGR-RHRIPYSRLQRND--RVTNEQ------WFELKANIWPSHTT-FMPSSISCLQSLQLYDQYFLASSMDGTVKLYDH 404 (513)
Q Consensus 335 ~~~~-~h~~~v~~v~~~~--~~~s~~------w~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~ 404 (513)
.+. .....+..+++.+ .++.+. +....+........ .....+.. +.++++++++++...++.|.+||.
T Consensus 101 -~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~-i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 101 -VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDG-VAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp -ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCC-EEECTTCCEEEEEGGGTEEEEECT
T ss_pred -eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCcee-EEEeCCCCEEEEECCCCEEEEEec
Confidence 222 2335678888887 344332 11111211111111 11123334 367888987777777889999998
Q ss_pred CCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 405 RLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 405 ~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
. ..........+...... ++++++|.++++...++.|.+|+..+.........+...+.++++++++.++++...+
T Consensus 179 ~--~~~~~~~~~~~~~~p~~--i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 179 E--SNNQVVLPFTDITAPWG--IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp T--TCCEEECCCSSCCSEEE--EEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred C--CCceEeecccCCCCceE--EEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 5 22222211222233334 8899999877777778999999987665443322333568999999998777776554
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.15 E-value=2.1e-09 Score=115.28 Aligned_cols=216 Identities=6% Similarity=-0.072 Sum_probs=135.3
Q ss_pred cccCcEEEEEEcCCCCEEEEEe-----C-CeEEEEECCCCcEEEEeeeCCCe--EEEEEecCCcEEEEEeCCCe------
Q 037288 254 SFKCTVWTADFCTNPSQAVIGT-----N-LGAAMVDMETGMASWVCRSKSDI--LAQQVIHSGNVVLCGFRNGA------ 319 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~s~s-----~-~~i~vwd~~~~~~~~~~~~~~~V--~~l~~~~~~~~l~sg~~dg~------ 319 (513)
+|...+..++|||||++||.+. + ..|++||+.+++.+. ..+-..+ .+++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 4666899999999999998442 2 359999999988641 1111222 68999999999999988776
Q ss_pred -------EEEEECCCCcccc-ccccccccCcCeEEEeeCC---eEEEeEee---------cccCcccceeEeecCCCceE
Q 037288 320 -------IVTVDVRKRQRGC-SSRAGRRHRIPYSRLQRND---RVTNEQWF---------ELKANIWPSHTTFMPSSISC 379 (513)
Q Consensus 320 -------i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~~---~~~s~~w~---------~~~~~~~~~~~~~~~~~v~~ 379 (513)
|++|++.++.... .+.....|...+..+.|+| .++..+++ ....................
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 276 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYE 276 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEE
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEE
Confidence 9999998876321 0234445667888999999 44443322 21111111222223334444
Q ss_pred EEEEcCCCCEEEEEe---cCCeEEEEecCCCCccceEEecCCC--CceeEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CC
Q 037288 380 LQSLQLYDQYFLASS---MDGTVKLYDHRLTTRGAVQSYEGHV--NSHTRIQLGVDQSERFVMSGGEDCKLRIWSIR-SG 453 (513)
Q Consensus 380 ~~~~~~~~~~l~s~s---~dg~i~lwd~~~~~~~~~~~~~~h~--~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~-~~ 453 (513)
.. + +++.+++.+. .++.|.+||+..........+..|. ..+.. ++++ ++.++++...|+..+||.+. ++
T Consensus 277 ~~-~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~--~~~~-~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 277 VH-A-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLS--VSIV-GGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp EE-E-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEE--EEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred EE-e-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEE--EEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 43 3 4566444443 2588999998622111134444343 33433 6666 67788889999998888665 46
Q ss_pred eEEEEecCC-CCCeEEEEEcCCC
Q 037288 454 ELVFEDKFS-NSVPSAVCWRTQR 475 (513)
Q Consensus 454 ~~~~~~~~~-~~~v~~v~~~p~~ 475 (513)
+.+..+..+ ...+..++++|++
T Consensus 352 ~~~~~l~~~~~~~v~~~~~s~d~ 374 (695)
T 2bkl_A 352 KPVRTVQLPGVGAASNLMGLEDL 374 (695)
T ss_dssp CEEEECCCSSSSEECCCBSCTTC
T ss_pred CeeEEecCCCCeEEEEeecCCCC
Confidence 666666544 4557778888875
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.10 E-value=3e-08 Score=95.96 Aligned_cols=165 Identities=5% Similarity=0.008 Sum_probs=113.9
Q ss_pred cccCcEEEEEEcC-CCCEEEEEe--CCeEEEEECCCCcEEEEeeeC-----------CCeEEEEEecC-CcEEEEEeCCC
Q 037288 254 SFKCTVWTADFCT-NPSQAVIGT--NLGAAMVDMETGMASWVCRSK-----------SDILAQQVIHS-GNVVLCGFRNG 318 (513)
Q Consensus 254 ~h~~~V~~~~~s~-~g~~l~s~s--~~~i~vwd~~~~~~~~~~~~~-----------~~V~~l~~~~~-~~~l~sg~~dg 318 (513)
++......++++| ++.++++.+ ++.|++|| .++..+..+... .....++++|+ ++++++...++
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~ 218 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG 218 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC
Confidence 4455789999999 888888874 56799999 456666665421 23789999998 78888888899
Q ss_pred eEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCe
Q 037288 319 AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGT 398 (513)
Q Consensus 319 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~ 398 (513)
.|++||..+++... ......+...+.+++|+| . ..+..+++.+++...+..
T Consensus 219 ~I~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~p------------------------g----~~~~~~g~~~v~~~~~~~ 269 (329)
T 3fvz_A 219 RIQCFKTDTKEFVR-EIKHASFGRNVFAISYIP------------------------G----FLFAVNGKPYFGDQEPVQ 269 (329)
T ss_dssp EEEEEETTTCCEEE-EECCTTTTTCEEEEEEET------------------------T----EEEEEECCCCTTCSCCCC
T ss_pred EEEEEECCCCcEEE-EEeccccCCCcceeeecC------------------------C----EEEEeCCCEEeccCCCcE
Confidence 99999998665433 111233444555544422 0 111124555555556679
Q ss_pred EEEEecCCCCccceEEec---CCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 037288 399 VKLYDHRLTTRGAVQSYE---GHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRS 452 (513)
Q Consensus 399 i~lwd~~~~~~~~~~~~~---~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~ 452 (513)
|++||+. ....+..+. ++...... ++++|+|.++++...++.|++|++..
T Consensus 270 v~~~~~~--~g~~~~~~~~~~~~~~~p~~--ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 270 GFVMNFS--SGEIIDVFKPVRKHFDMPHD--IVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEETT--TCCEEEEECCSSSCCSSEEE--EEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEEcC--CCeEEEEEcCCCCccCCeeE--EEECCCCCEEEEECCCCEEEEEeCCc
Confidence 9999986 455666663 45555544 88999998888888899999999753
No 185
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.10 E-value=7.4e-08 Score=92.03 Aligned_cols=221 Identities=7% Similarity=0.028 Sum_probs=141.2
Q ss_pred ccccCcEEEEEEcCCCCEEEE--------EeCCeEEEEECCCCcEEEEee-----eCCCeEEEEEecC-CcEEEEEeCCC
Q 037288 253 ASFKCTVWTADFCTNPSQAVI--------GTNLGAAMVDMETGMASWVCR-----SKSDILAQQVIHS-GNVVLCGFRNG 318 (513)
Q Consensus 253 ~~h~~~V~~~~~s~~g~~l~s--------~s~~~i~vwd~~~~~~~~~~~-----~~~~V~~l~~~~~-~~~l~sg~~dg 318 (513)
...-....+++|+++|.++++ ..+++|.+||..+++...... +...+.+++++++ |+++++.. +.
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~ 92 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RL 92 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TT
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CC
Confidence 333346689999999998887 456779999998887654433 3466899999999 76555554 45
Q ss_pred eEEEEECCCCcccccc-ccc-cc-cCcCeEEEeeCC--eEEEeE---------------------eeccc-CcccceeEe
Q 037288 319 AIVTVDVRKRQRGCSS-RAG-RR-HRIPYSRLQRND--RVTNEQ---------------------WFELK-ANIWPSHTT 371 (513)
Q Consensus 319 ~i~iwd~~~~~~~~~~-~~~-~~-h~~~v~~v~~~~--~~~s~~---------------------w~~~~-~~~~~~~~~ 371 (513)
.|.+||.. ++... + ... .. ....+.++++.+ .++.+. |.... +.. ....
T Consensus 93 ~l~~~d~~-g~~~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~--~~~~ 168 (314)
T 1pjx_A 93 GLLVVQTD-GTFEE-IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQM--IQVD 168 (314)
T ss_dssp EEEEEETT-SCEEE-CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCE--EEEE
T ss_pred CEEEEeCC-CCEEE-EEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCE--EEec
Confidence 79999988 54322 1 111 11 224578888887 333222 11111 111 1111
Q ss_pred ecCCCceEEEEEc----CCCCEEEEE-ecCCeEEEEecCCCCcc------ceEEecCCC-CceeEEEEEEcCCCCEEEEE
Q 037288 372 FMPSSISCLQSLQ----LYDQYFLAS-SMDGTVKLYDHRLTTRG------AVQSYEGHV-NSHTRIQLGVDQSERFVMSG 439 (513)
Q Consensus 372 ~~~~~v~~~~~~~----~~~~~l~s~-s~dg~i~lwd~~~~~~~------~~~~~~~h~-~~v~~~~~~~s~~g~~l~sg 439 (513)
........ ..++ ++++.|.++ ..++.|.+||+. ..+ ....+.++. .... .++++++|+++++.
T Consensus 169 ~~~~~~~~-i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~--~~g~~~~~~~~~~~~~~~~~~p~--~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 169 TAFQFPNG-IAVRHMNDGRPYQLIVAETPTKKLWSYDIK--GPAKIENKKVWGHIPGTHEGGAD--GMDFDEDNNLLVAN 243 (314)
T ss_dssp EEESSEEE-EEEEECTTSCEEEEEEEETTTTEEEEEEEE--ETTEEEEEEEEEECCCCSSCEEE--EEEEBTTCCEEEEE
T ss_pred cCCCCcce-EEEecccCCCCCEEEEEECCCCeEEEEECC--CCCccccceEEEECCCCCCCCCC--ceEECCCCCEEEEE
Confidence 11122233 3677 888665554 567899999974 122 222333332 3333 38899999988888
Q ss_pred eCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCc-eEEeeCC
Q 037288 440 GEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRS-MGPQIEG 483 (513)
Q Consensus 440 ~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~-~~~t~~~ 483 (513)
..++.|.+||..+++.+..+..+...+.+++++|++. +++++..
T Consensus 244 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp ETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred cCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC
Confidence 8889999999987877776666667799999999975 7776655
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.07 E-value=4.3e-08 Score=94.78 Aligned_cols=205 Identities=6% Similarity=0.001 Sum_probs=133.5
Q ss_pred CccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEE-eCCeEEEEECCCCcEEEEeeeCC----
Q 037288 223 GGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIG-TNLGAAMVDMETGMASWVCRSKS---- 297 (513)
Q Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~-s~~~i~vwd~~~~~~~~~~~~~~---- 297 (513)
.+.+.+++..+.... ..+ ........++++++++++++. .++.|.+||..+++....+....
T Consensus 63 ~~~v~viD~~t~~~~------------~~i-~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~ 129 (328)
T 3dsm_A 63 SHVIFAIDINTFKEV------------GRI-TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDME 129 (328)
T ss_dssp GTEEEEEETTTCCEE------------EEE-ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTT
T ss_pred CCEEEEEECcccEEE------------EEc-CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCcccc
Confidence 456777766543322 222 223567899999998666665 46779999999998877666444
Q ss_pred --CeEEEEEecCCcEEEEEe-CCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecC
Q 037288 298 --DILAQQVIHSGNVVLCGF-RNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMP 374 (513)
Q Consensus 298 --~V~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~ 374 (513)
....+++ .++.++++.. .++.|.++|+.+.+... .+ ...
T Consensus 130 ~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~---~i----------------------------------~~g 171 (328)
T 3dsm_A 130 SGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVD---EL----------------------------------TIG 171 (328)
T ss_dssp TCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEE---EE----------------------------------ECS
T ss_pred CCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEE---EE----------------------------------EcC
Confidence 5667777 3444444443 48999999998876432 11 111
Q ss_pred CCceEEEEEcCCCCEEEEEecC----------CeEEEEecCCCCccceEEecCCC-CceeEEEEEEcCCCCEEEEEeCCC
Q 037288 375 SSISCLQSLQLYDQYFLASSMD----------GTVKLYDHRLTTRGAVQSYEGHV-NSHTRIQLGVDQSERFVMSGGEDC 443 (513)
Q Consensus 375 ~~v~~~~~~~~~~~~l~s~s~d----------g~i~lwd~~~~~~~~~~~~~~h~-~~v~~~~~~~s~~g~~l~sg~~Dg 443 (513)
..... +.++++|++++++..+ +.|.++|.. .......+.... ... ..++++|+++.|+++..
T Consensus 172 ~~p~~-i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--t~~v~~~~~~~~g~~p--~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 172 IQPTS-LVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--TFTVEKQFKFKLGDWP--SEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp SCBCC-CEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--TTEEEEEEECCTTCCC--EEEEECTTSCEEEEESS--
T ss_pred CCccc-eEEcCCCCEEEEECCCccCCccccCCceEEEEECC--CCeEEEEEecCCCCCc--eeEEEecCCCEEEEEcc--
Confidence 11112 3567888877776654 789999986 333444554321 123 34899999999988765
Q ss_pred cEEEEeCCCCeEEEE--ecCCCCCeEEEEEcC-CCceEEeeCCCe
Q 037288 444 KLRIWSIRSGELVFE--DKFSNSVPSAVCWRT-QRSMGPQIEGKI 485 (513)
Q Consensus 444 ~v~vwd~~~~~~~~~--~~~~~~~v~~v~~~p-~~~~~~t~~~~~ 485 (513)
.|.+||+.+++.... +......+..++++| ++.++++...++
T Consensus 245 ~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y 289 (328)
T 3dsm_A 245 DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDY 289 (328)
T ss_dssp SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTS
T ss_pred EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEccccc
Confidence 899999998886422 122245689999999 588888874444
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.06 E-value=2.2e-08 Score=96.81 Aligned_cols=190 Identities=9% Similarity=-0.041 Sum_probs=123.1
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccc
Q 037288 257 CTVWTADFCTNPSQAVIG-TNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSR 335 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~-s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 335 (513)
.....+.+.. ++++++. .++.|.+||..+++.+..+........+++++++.++++...++.|.+||+.+.+...
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~--- 119 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG--- 119 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE---
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE---
Confidence 3456777743 4444444 4567999999999988877766779999999998655554489999999998876432
Q ss_pred cccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe-cCCeEEEEecCCCCccceEE
Q 037288 336 AGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS-MDGTVKLYDHRLTTRGAVQS 414 (513)
Q Consensus 336 ~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s-~dg~i~lwd~~~~~~~~~~~ 414 (513)
.+..... .........+ .+ .++..+++.. .++.|.++|+. ....+.+
T Consensus 120 ~i~~g~~----------------------------~~~~~~p~~i-~~-~~~~lyv~~~~~~~~v~viD~~--t~~~~~~ 167 (328)
T 3dsm_A 120 YIECPDM----------------------------DMESGSTEQM-VQ-YGKYVYVNCWSYQNRILKIDTE--TDKVVDE 167 (328)
T ss_dssp EEECTTC----------------------------CTTTCBCCCE-EE-ETTEEEEEECTTCCEEEEEETT--TTEEEEE
T ss_pred EEEcCCc----------------------------cccCCCcceE-EE-ECCEEEEEcCCCCCEEEEEECC--CCeEEEE
Confidence 1110000 0000011222 23 2444444443 48899999996 4445555
Q ss_pred ecCCCCceeEEEEEEcCCCCEEEEEeCC----------CcEEEEeCCCCeEEEEecCC-CCCeEEEEEcCC-CceEEeeC
Q 037288 415 YEGHVNSHTRIQLGVDQSERFVMSGGED----------CKLRIWSIRSGELVFEDKFS-NSVPSAVCWRTQ-RSMGPQIE 482 (513)
Q Consensus 415 ~~~h~~~v~~~~~~~s~~g~~l~sg~~D----------g~v~vwd~~~~~~~~~~~~~-~~~v~~v~~~p~-~~~~~t~~ 482 (513)
+.....+ .. +.++|+|++++++..+ +.|.++|..+++....+... ...+..++++|+ ..++++.+
T Consensus 168 i~~g~~p-~~--i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 168 LTIGIQP-TS--LVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EECSSCB-CC--CEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS
T ss_pred EEcCCCc-cc--eEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc
Confidence 5543332 23 6789999877776654 78999999999988776543 346899999997 55666554
Q ss_pred CCee
Q 037288 483 GKIH 486 (513)
Q Consensus 483 ~~~~ 486 (513)
.+.
T Consensus 245 -~v~ 247 (328)
T 3dsm_A 245 -DIW 247 (328)
T ss_dssp -SEE
T ss_pred -EEE
Confidence 443
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.04 E-value=2.4e-08 Score=94.00 Aligned_cols=172 Identities=9% Similarity=0.042 Sum_probs=119.7
Q ss_pred CCCEEEEEe-CCeEEEEECCCCcEEEEeeeCC--CeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcC
Q 037288 267 NPSQAVIGT-NLGAAMVDMETGMASWVCRSKS--DILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIP 343 (513)
Q Consensus 267 ~g~~l~s~s-~~~i~vwd~~~~~~~~~~~~~~--~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 343 (513)
.+++|++++ ++.|.+||.++|+.++.+.... .+.++.+.|+|++++ +.++.|..||. +++... .+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W---~~~~~~~- 76 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELW---NIAAPAG- 76 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEE---EEECCTT-
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEE---EEcCCCC-
Confidence 456777775 5569999999999999888543 689999999999888 35788999998 565432 2221100
Q ss_pred eEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEec-CCeEEEEecCCCCccceEEec------
Q 037288 344 YSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM-DGTVKLYDHRLTTRGAVQSYE------ 416 (513)
Q Consensus 344 v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~-dg~i~lwd~~~~~~~~~~~~~------ 416 (513)
..+.+ ..+.++|+++++.+. ++.|..+|. +.+.+..+.
T Consensus 77 -------------------------------~~~~~-~~~~~dG~~lv~~~~~~~~v~~vd~---~Gk~l~~~~~~~~~~ 121 (276)
T 3no2_A 77 -------------------------------CEMQT-ARILPDGNALVAWCGHPSTILEVNM---KGEVLSKTEFETGIE 121 (276)
T ss_dssp -------------------------------CEEEE-EEECTTSCEEEEEESTTEEEEEECT---TSCEEEEEEECCSCS
T ss_pred -------------------------------ccccc-cEECCCCCEEEEecCCCCEEEEEeC---CCCEEEEEeccCCCC
Confidence 01112 356689999998887 777777775 344444443
Q ss_pred CCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 417 GHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 417 ~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
++...... +++.++|++|++...++.|..||.. |+.+.++.... .+.++...+++.+++++..+
T Consensus 122 ~~~~~~~~--v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~-~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 122 RPHAQFRQ--INKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG-TPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp SGGGSCSC--CEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEECBTT
T ss_pred cccccccC--ceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC-CccceeEcCCCCEEEEeCCC
Confidence 11112222 5678999999999999999999988 99999987653 45567778886655554443
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.04 E-value=4.9e-08 Score=95.77 Aligned_cols=201 Identities=10% Similarity=-0.013 Sum_probs=114.5
Q ss_pred CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEe----------CCCeEEEEECCCCccccccccccc---cCc
Q 037288 276 NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGF----------RNGAIVTVDVRKRQRGCSSRAGRR---HRI 342 (513)
Q Consensus 276 ~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~----------~dg~i~iwd~~~~~~~~~~~~~~~---h~~ 342 (513)
++.|.+||..+++.+..+.....- .++|+|||++++++. .++.|.+||+.+.+....+..... +..
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 557999999999887766533334 899999999999886 367899999987765331211111 224
Q ss_pred CeEEEeeCC---eEEEeE---------eecccCcccceeE-eecCCCceEEEEEcCC-CCEEEEEecCCeEEEEecCCC-
Q 037288 343 PYSRLQRND---RVTNEQ---------WFELKANIWPSHT-TFMPSSISCLQSLQLY-DQYFLASSMDGTVKLYDHRLT- 407 (513)
Q Consensus 343 ~v~~v~~~~---~~~s~~---------w~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~~l~s~s~dg~i~lwd~~~~- 407 (513)
....++++| .++++. |+...++.. .. +..... ..+ .+.|+ ...+++.+.||.+.+|++...
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~--~~~i~~~~~-~~v-~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV--EDVTAAAGC-WSV-IPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE--EEEGGGTTE-EEE-EECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE--EEEecCCCc-cee-EEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 466788887 344332 555554332 11 111110 001 11122 133344444444444443200
Q ss_pred ---------------------------------------------Ccc--ceEEecCC------CCceeE--EEEEEcCC
Q 037288 408 ---------------------------------------------TRG--AVQSYEGH------VNSHTR--IQLGVDQS 432 (513)
Q Consensus 408 ---------------------------------------------~~~--~~~~~~~h------~~~v~~--~~~~~s~~ 432 (513)
... .+..+... ...... ..++|+|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d 264 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA 264 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT
T ss_pred cEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecC
Confidence 111 11111000 000000 01578999
Q ss_pred CCEEEEEeC-----------CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCC
Q 037288 433 ERFVMSGGE-----------DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 433 g~~l~sg~~-----------Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
++.++++.. ++.|.+||+.+++.+..+..+. +.+++|+|++..+.+++.
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC
Confidence 888877643 3479999999999999988766 899999999655444443
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.04 E-value=4e-07 Score=86.01 Aligned_cols=216 Identities=7% Similarity=-0.009 Sum_probs=141.7
Q ss_pred eccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEe-e-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCC
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVC-R-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKR 328 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~-~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 328 (513)
+..+...+.++++.++|.++++.. ++.|.+||.. +...... . ....+.+++++++|.++++...++.|..||.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 344556899999999999887765 5679999998 6544332 1 34569999999999988887778999999986 2
Q ss_pred ccccccccccccCcCeEEEeeCC--eEEEeE--------eecccCcccceeEee-cCCCceEEEEEcCCCCEEEEEecCC
Q 037288 329 QRGCSSRAGRRHRIPYSRLQRND--RVTNEQ--------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLASSMDG 397 (513)
Q Consensus 329 ~~~~~~~~~~~h~~~v~~v~~~~--~~~s~~--------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~dg 397 (513)
+. . ...+......+..+.+.+ .++.+. |+. .+.... .... ....+.. +.+.++++++++...++
T Consensus 88 ~~-~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~~~-i~~~~~g~l~v~~~~~~ 162 (299)
T 2z2n_A 88 II-K-EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYPSF-ITLGSDNALWFTENQNN 162 (299)
T ss_dssp CE-E-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEE-EEECTTSCEEEEETTTT
T ss_pred cE-E-EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCCce-EEEcCCCCEEEEeCCCC
Confidence 21 1 112233455678888887 333322 433 222211 1111 1223444 46778888887777778
Q ss_pred eEEEEecCCCCccceEEe--cCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE-ecCCCCCeEEEEEcCC
Q 037288 398 TVKLYDHRLTTRGAVQSY--EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFE-DKFSNSVPSAVCWRTQ 474 (513)
Q Consensus 398 ~i~lwd~~~~~~~~~~~~--~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~-~~~~~~~v~~v~~~p~ 474 (513)
.|..||.. .. +..+ ..+...+. .++++++|++.++...++.|.+||. +++.... ...+...+.++++.++
T Consensus 163 ~i~~~~~~---g~-~~~~~~~~~~~~~~--~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 163 AIGRITES---GD-ITEFKIPTPASGPV--GITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAG 235 (299)
T ss_dssp EEEEECTT---CC-EEEEECSSTTCCEE--EEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST
T ss_pred EEEEEcCC---Cc-EEEeeCCCCCCcce--eEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCC
Confidence 99999972 22 2222 22333333 4888999997777777889999999 7764432 3334566899999999
Q ss_pred CceEEee
Q 037288 475 RSMGPQI 481 (513)
Q Consensus 475 ~~~~~t~ 481 (513)
+.++++.
T Consensus 236 g~l~v~~ 242 (299)
T 2z2n_A 236 IDLWFTE 242 (299)
T ss_dssp TCEEEEE
T ss_pred CCEEEec
Confidence 7777775
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.03 E-value=4.7e-08 Score=105.06 Aligned_cols=160 Identities=9% Similarity=-0.019 Sum_probs=104.0
Q ss_pred ccCcEEEEEEcCCCCEEEEEe------CCeEEEEECCC------C--cEEEEeeeCCCeEEEEEecCCcEEEEEeCC---
Q 037288 255 FKCTVWTADFCTNPSQAVIGT------NLGAAMVDMET------G--MASWVCRSKSDILAQQVIHSGNVVLCGFRN--- 317 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~s------~~~i~vwd~~~------~--~~~~~~~~~~~V~~l~~~~~~~~l~sg~~d--- 317 (513)
|...+..+.|+|||++|+.++ +..|.+||+.+ + ....+..+...+.. .|+++|..|+..+.+
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~ 309 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSP 309 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCT
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCC
Confidence 556688999999999888654 34599999986 5 34444445555554 488888766655543
Q ss_pred -CeEEEEECCCCccccccccccccCc--CeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe
Q 037288 318 -GAIVTVDVRKRQRGCSSRAGRRHRI--PYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS 394 (513)
Q Consensus 318 -g~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s 394 (513)
+.|.+||+.++.... .+.+..|.. .+.. ..+++++.++++..
T Consensus 310 ~~~l~~~d~~~~~~~~-~~~l~~~~~~~~~~~----------------------------------~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 310 NYRLINIDFTDPEESK-WKVLVPEHEKDVLEW----------------------------------VACVRSNFLVLCYL 354 (710)
T ss_dssp TCEEEEEETTSCCGGG-CEEEECCCSSCEEEE----------------------------------EEEETTTEEEEEEE
T ss_pred CCEEEEEeCCCCCccc-ceeccCCCCCCeEEE----------------------------------EEEEcCCEEEEEEE
Confidence 469999998764211 123333322 1222 24445777888888
Q ss_pred cCCeEE--EEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEE-e---CCCcEEEEeCCCCe
Q 037288 395 MDGTVK--LYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSG-G---EDCKLRIWSIRSGE 454 (513)
Q Consensus 395 ~dg~i~--lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg-~---~Dg~v~vwd~~~~~ 454 (513)
.|+..+ +||+. ....+..+..+.+.+.. ++++|+++.|+.. + ..++|++||+.+++
T Consensus 355 ~~g~~~l~~~~~~--~g~~~~~l~~~~~~v~~--~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 355 HDVKNTLQLHDLA--TGALLKIFPLEVGSVVG--YSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ETTEEEEEEEETT--TCCEEEEECCCSSEEEE--EECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ECCEEEEEEEECC--CCCEEEecCCCCceEEE--EecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 888654 55653 33356777777655544 7888998766533 2 35789999998876
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.03 E-value=4e-08 Score=105.28 Aligned_cols=163 Identities=10% Similarity=-0.056 Sum_probs=104.4
Q ss_pred ccccCcEEEEEEcCCCCEEEEE-eCC----eEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEe---CCCeEEEEE
Q 037288 253 ASFKCTVWTADFCTNPSQAVIG-TNL----GAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGF---RNGAIVTVD 324 (513)
Q Consensus 253 ~~h~~~V~~~~~s~~g~~l~s~-s~~----~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~---~dg~i~iwd 324 (513)
..|...+..+.|+|||++|+.+ .++ .|.+||..++....+..+...+....+ ++|.+++.+. .++.|.+||
T Consensus 223 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 223 TGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp CCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEB
T ss_pred CCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEe
Confidence 3456688999999999988755 344 377777766766666666666666666 5666444443 258999999
Q ss_pred CCCCcccccccccccc--CcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEE
Q 037288 325 VRKRQRGCSSRAGRRH--RIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLY 402 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h--~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lw 402 (513)
+.++.... ...+..| ...+.. ..++ ++.++++...|+..+||
T Consensus 302 ~~~~~~~~-~~~l~~~~~~~~l~~----------------------------------~~~~-~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 302 PAKPARAS-WKEIVPEDSSASLLS----------------------------------VSIV-GGHLSLEYLKDATSEVR 345 (695)
T ss_dssp TTBCSGGG-CEEEECCCSSCEEEE----------------------------------EEEE-TTEEEEEEEETTEEEEE
T ss_pred CCCCCccC-CeEEecCCCCCeEEE----------------------------------EEEE-CCEEEEEEEECCEEEEE
Confidence 97764211 1122222 111222 2334 67788888999999988
Q ss_pred ecCCCCccceEEecCC-CCceeEEEEEEcCCCCEEEEEe----CCCcEEEEeCCCCeE
Q 037288 403 DHRLTTRGAVQSYEGH-VNSHTRIQLGVDQSERFVMSGG----EDCKLRIWSIRSGEL 455 (513)
Q Consensus 403 d~~~~~~~~~~~~~~h-~~~v~~~~~~~s~~g~~l~sg~----~Dg~v~vwd~~~~~~ 455 (513)
.+.. ..+....+..+ ...+.. ++++|+++.|+... ..++|++||+.+++.
T Consensus 346 ~~~~-~g~~~~~l~~~~~~~v~~--~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 346 VATL-KGKPVRTVQLPGVGAASN--LMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEET-TCCEEEECCCSSSSEECC--CBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEeC-CCCeeEEecCCCCeEEEE--eecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7642 23345556554 444444 67889988776332 357899999988774
No 193
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.03 E-value=1.9e-07 Score=90.09 Aligned_cols=185 Identities=9% Similarity=-0.028 Sum_probs=120.2
Q ss_pred cCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeC-----CCeEEEEEecCCcEEEEEeC------CCeEEEEE
Q 037288 256 KCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSK-----SDILAQQVIHSGNVVLCGFR------NGAIVTVD 324 (513)
Q Consensus 256 ~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~-----~~V~~l~~~~~~~~l~sg~~------dg~i~iwd 324 (513)
...+.+++++++|+++++. +++|.+||..+++........ ..+.+++++|+|+++++... .+.|..+|
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 3578999999999987765 567999999988865443321 24889999999987665532 24555555
Q ss_pred CCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEE-ecCCeEEEEe
Q 037288 325 VRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLAS-SMDGTVKLYD 403 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-s~dg~i~lwd 403 (513)
.++.. .+..+.. ...-..++++++.|+.+ +.++.|.+||
T Consensus 168 --~g~~~----~~~~~~~----------------------------------~~~~i~~s~dg~~lyv~~~~~~~I~~~d 207 (326)
T 2ghs_A 168 --KGKVT----KLFADIS----------------------------------IPNSICFSPDGTTGYFVDTKVNRLMRVP 207 (326)
T ss_dssp --TTEEE----EEEEEES----------------------------------SEEEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred --CCcEE----EeeCCCc----------------------------------ccCCeEEcCCCCEEEEEECCCCEEEEEE
Confidence 33211 1110000 11124678899876554 4578999999
Q ss_pred cCCCCc-c-----ceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEc-CC-C
Q 037288 404 HRLTTR-G-----AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWR-TQ-R 475 (513)
Q Consensus 404 ~~~~~~-~-----~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~-p~-~ 475 (513)
+..... . .+..+........ .++++++|++.++...++.|.+||. +++.+..+..+...+++++|. ++ .
T Consensus 208 ~~~~~Gl~~~~~~~~~~~~~~~~~p~--gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 208 LDARTGLPTGKAEVFIDSTGIKGGMD--GSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp BCTTTCCBSSCCEEEEECTTSSSEEE--EEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred cccccCCcccCceEEEECCCCCCCCC--eeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCC
Confidence 741011 1 1223332333333 3788999988777767789999998 677777777666679999998 77 4
Q ss_pred ceEEeeCCC
Q 037288 476 SMGPQIEGK 484 (513)
Q Consensus 476 ~~~~t~~~~ 484 (513)
.+++++..+
T Consensus 285 ~L~vt~~~~ 293 (326)
T 2ghs_A 285 RLLVTSARE 293 (326)
T ss_dssp EEEEEEBCT
T ss_pred EEEEEecCC
Confidence 566665544
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.00 E-value=2.6e-08 Score=107.60 Aligned_cols=186 Identities=9% Similarity=-0.063 Sum_probs=119.7
Q ss_pred ccCcEEEEEEcCCCCEEEEEeC------CeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCe---------
Q 037288 255 FKCTVWTADFCTNPSQAVIGTN------LGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGA--------- 319 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~s~------~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~--------- 319 (513)
|...+..++|||||++||.+++ ..|++||+.+++.+........+..++|+|| +.|+.+..|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 4457889999999999987643 2499999999987654322223468899999 88888877654
Q ss_pred -----EEEEECCCCcccc-ccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEE
Q 037288 320 -----IVTVDVRKRQRGC-SSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLAS 393 (513)
Q Consensus 320 -----i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 393 (513)
|++|++.++.... .+.....+... +.. ..++|+|++|+..
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~---------------------------------~~~-~~~SpDG~~l~~~ 285 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKR---------------------------------GHG-ASVSSDGRWVVIT 285 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTC---------------------------------EEE-EEECTTSCEEEEE
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeE---------------------------------EEE-EEECCCCCEEEEE
Confidence 8888887654211 00011111111 222 4678999999887
Q ss_pred ecCC-----eEEEEecCCCCcc-c-eEEecCCCCceeEEEEEEcCCCCEEEEEeCC----CcEEEEeCCCC--eEEEEec
Q 037288 394 SMDG-----TVKLYDHRLTTRG-A-VQSYEGHVNSHTRIQLGVDQSERFVMSGGED----CKLRIWSIRSG--ELVFEDK 460 (513)
Q Consensus 394 s~dg-----~i~lwd~~~~~~~-~-~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D----g~v~vwd~~~~--~~~~~~~ 460 (513)
+.++ .|.+||+. ... . ...+..+...+.. . ++|+|+.|+..+.+ +.|.+||+.++ +....+.
T Consensus 286 ~~~~~~~~~~l~~~d~~--~~~~~~~~~l~~~~~~~~~--~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~ 360 (741)
T 1yr2_A 286 SSEGTDPVNTVHVARVT--NGKIGPVTALIPDLKAQWD--F-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP 360 (741)
T ss_dssp EECTTCSCCEEEEEEEE--TTEECCCEEEECSSSSCEE--E-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC
T ss_pred EEccCCCcceEEEEECC--CCCCcccEEecCCCCceEE--E-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec
Confidence 7654 89999986 221 3 5666656554433 2 35889988877753 45999999885 3444445
Q ss_pred CCCCCeEEEEEcCCCceEEee
Q 037288 461 FSNSVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 461 ~~~~~v~~v~~~p~~~~~~t~ 481 (513)
.+...+..++|..+ .++++.
T Consensus 361 ~~~~~l~~~~~~~~-~lv~~~ 380 (741)
T 1yr2_A 361 ESKDNLESVGIAGN-RLFASY 380 (741)
T ss_dssp CCSSEEEEEEEEBT-EEEEEE
T ss_pred CCCCeEEEEEEECC-EEEEEE
Confidence 55556777888844 444443
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.99 E-value=9.7e-08 Score=92.66 Aligned_cols=198 Identities=9% Similarity=0.005 Sum_probs=122.8
Q ss_pred CcEEEEEEcCCCCEEEEEe----------CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCC---C--eEE
Q 037288 257 CTVWTADFCTNPSQAVIGT----------NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRN---G--AIV 321 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s----------~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~d---g--~i~ 321 (513)
..+...++ ||+.++... +..|.+||+.+++...+ ..+.+++|+|||+.|+.++.+ + .|.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 35667777 888877542 33488999998876544 568899999999988877654 3 478
Q ss_pred EEECCCCccccccccccccCcCeEEEeeCC---eEEEeE----------------------------------eecccCc
Q 037288 322 TVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQ----------------------------------WFELKAN 364 (513)
Q Consensus 322 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~----------------------------------w~~~~~~ 364 (513)
+||+..++.. .+..+.. +..+.|+| .++..+ |+...+.
T Consensus 89 ~~~~~~g~~~----~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 89 VADLETLSSK----KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEETTTTEEE----EEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred EEECCCCceE----EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 8888776532 2333334 89999998 333322 3333333
Q ss_pred ccceeEeecCCCceEEEEEcCCCCEEEEEecCC-------eEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEE
Q 037288 365 IWPSHTTFMPSSISCLQSLQLYDQYFLASSMDG-------TVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVM 437 (513)
Q Consensus 365 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg-------~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~ 437 (513)
.. ..+..+ .+.. ..++|+| +++++..++ ...||.+. .+....+..+ ..+ ..++|+|++|+
T Consensus 164 ~~--~~l~~~-~~~~-~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d---~~~~~~l~~~-~~~----~~~spdg~~l~ 230 (347)
T 2gop_A 164 VI--EEFEKP-RFSS-GIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE---DGKEEKMFEK-VSF----YAVDSDGERIL 230 (347)
T ss_dssp EE--EEEEEE-TTCE-EEEETTE-EEEEEECCCSSCCSSCCEEEEEEE---TTEEEEEEEE-ESE----EEEEECSSCEE
T ss_pred EE--eeecCC-Cccc-ccCCCCe-EEEEEecccccccccccccEEEeC---CCceEEeccC-cce----eeECCCCCEEE
Confidence 20 111112 4444 3678999 777776542 44566553 2233344434 332 23389999988
Q ss_pred EEeCC--------CcEEEEeCCCCeEEEEecCCCCCeEE-EEEcCCCceEEeeC
Q 037288 438 SGGED--------CKLRIWSIRSGELVFEDKFSNSVPSA-VCWRTQRSMGPQIE 482 (513)
Q Consensus 438 sg~~D--------g~v~vwd~~~~~~~~~~~~~~~~v~~-v~~~p~~~~~~t~~ 482 (513)
.++.+ ..|++|| +++.......+...+.. ++|+ ++ ++++..
T Consensus 231 ~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~ 280 (347)
T 2gop_A 231 LYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLF 280 (347)
T ss_dssp EEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEE
T ss_pred EEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEe
Confidence 87754 3688888 66655444555667886 9999 77 554443
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.99 E-value=5.6e-07 Score=93.30 Aligned_cols=241 Identities=8% Similarity=-0.026 Sum_probs=147.7
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeC-CeEEEEECC--CCcEEEEeeeCCC
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTN-LGAAMVDME--TGMASWVCRSKSD 298 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~--~~~~~~~~~~~~~ 298 (513)
.++.+.+++..+.... ..+. ....+..+.|+|||+++.++++ +.|.+||+. +++.+..+.....
T Consensus 175 ~~~~V~viD~~t~~v~------------~~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~ 241 (567)
T 1qks_A 175 DAGQIALIDGSTYEIK------------TVLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE 241 (567)
T ss_dssp TTTEEEEEETTTCCEE------------EEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred CCCeEEEEECCCCeEE------------EEEe-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC
Confidence 4677888877644322 1122 2235678999999998887764 569999996 7887777776566
Q ss_pred eEEEEEe----cCCcEEEEEeC-CCeEEEEECCCCcccccccccc-------ccCc-CeEEEeeCC---eEEEeE-----
Q 037288 299 ILAQQVI----HSGNVVLCGFR-NGAIVTVDVRKRQRGCSSRAGR-------RHRI-PYSRLQRND---RVTNEQ----- 357 (513)
Q Consensus 299 V~~l~~~----~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~-------~h~~-~v~~v~~~~---~~~s~~----- 357 (513)
...++|+ |||++++++.. +++|.++|..+.+....+.... .|.. .+..+..++ .++...
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 7899999 69988777765 5999999988876543111110 0212 455555554 222211
Q ss_pred ---eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe-cCCeEEEEecCCCCccceEEecC-----CCCceeEEEEE
Q 037288 358 ---WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS-MDGTVKLYDHRLTTRGAVQSYEG-----HVNSHTRIQLG 428 (513)
Q Consensus 358 ---w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s-~dg~i~lwd~~~~~~~~~~~~~~-----h~~~v~~~~~~ 428 (513)
++...........+........ ..|++++++|+++. .++.|.++|+. +...+..+.. |.+. ...+
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d-~~~~pdgr~~~va~~~sn~V~ViD~~--t~kl~~~i~vgg~~Phpg~--g~~~- 395 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHD-GGLDGSHRYFITAANARNKLVVIDTK--EGKLVAIEDTGGQTPHPGR--GANF- 395 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEE-EEECTTSCEEEEEEGGGTEEEEEETT--TTEEEEEEECSSSSBCCTT--CEEE-
T ss_pred EEEEecCCCccceeeeeeccccccC-ceECCCCCEEEEEeCCCCeEEEEECC--CCcEEEEEeccCcCCCCcc--ceee-
Confidence 1111111011111222222223 46899999987766 57899999996 4444444432 3322 2122
Q ss_pred EcCCCCEEE-EEe-CCCcEEEEeCCC-------CeEEEEecCCCCCeEEEEEcCCC-ceEEee
Q 037288 429 VDQSERFVM-SGG-EDCKLRIWSIRS-------GELVFEDKFSNSVPSAVCWRTQR-SMGPQI 481 (513)
Q Consensus 429 ~s~~g~~l~-sg~-~Dg~v~vwd~~~-------~~~~~~~~~~~~~v~~v~~~p~~-~~~~t~ 481 (513)
++|++..+. ++. .++.|.++|..+ .+.+.++......-..+..+|++ .++++.
T Consensus 396 ~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 396 VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 578855554 443 468999999988 77888887654433457789994 556555
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.96 E-value=1.7e-06 Score=81.58 Aligned_cols=213 Identities=7% Similarity=-0.024 Sum_probs=136.7
Q ss_pred ccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEe-e-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccc
Q 037288 255 FKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVC-R-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRG 331 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~-~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 331 (513)
+...+.++++.++|.++++.. ++.|..||.. ++..... . ....+.++++.++|+++++...++.|..||. +++..
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 346789999999999887765 5679999986 4432221 1 3346899999999998888877899999998 44322
Q ss_pred cccccccccCcCeEEEeeCC--eEEEeE--------eecccCcccceeEee-cCCCceEEEEEcCCCCEEEEEecCCeEE
Q 037288 332 CSSRAGRRHRIPYSRLQRND--RVTNEQ--------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLASSMDGTVK 400 (513)
Q Consensus 332 ~~~~~~~~h~~~v~~v~~~~--~~~s~~--------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~dg~i~ 400 (513)
. .....+...+..+.+.+ .++.+. |+. .+.... .... ....+.. +.++++++++++...++.|.
T Consensus 133 ~--~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~-i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 133 E--YELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVG-ITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp E--EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEE-EEECTTSSEEEEETTTTEEE
T ss_pred E--ecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCccee-EEECCCCCEEEEccCCceEE
Confidence 1 12233455678888887 333322 443 332211 1111 1223444 46788888777766788999
Q ss_pred EEecCCCCccceEEe--cCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE-ecCCCCCeEEEEEcCCCce
Q 037288 401 LYDHRLTTRGAVQSY--EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFE-DKFSNSVPSAVCWRTQRSM 477 (513)
Q Consensus 401 lwd~~~~~~~~~~~~--~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~-~~~~~~~v~~v~~~p~~~~ 477 (513)
+||.. .. +..+ ..+...+.. ++++++|+++++...++.|..||. +++.... +..+...+.++++ +++.+
T Consensus 208 ~~~~~---g~-~~~~~~~~~~~~~~~--i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l 279 (299)
T 2z2n_A 208 RITTS---GE-ITEFKIPTPNARPHA--ITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETI 279 (299)
T ss_dssp EECTT---CC-EEEEECSSTTCCEEE--EEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCE
T ss_pred EECCC---Cc-EEEEECCCCCCCcee--EEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCE
Confidence 99972 22 2223 223344444 888999997776667889999998 5553322 2334566899999 88766
Q ss_pred EEeeC
Q 037288 478 GPQIE 482 (513)
Q Consensus 478 ~~t~~ 482 (513)
+++..
T Consensus 280 ~v~~~ 284 (299)
T 2z2n_A 280 WFAME 284 (299)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 66653
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.91 E-value=6.3e-07 Score=89.32 Aligned_cols=222 Identities=8% Similarity=0.002 Sum_probs=140.0
Q ss_pred CcEEEEEEcCCCCEEEEEeC-CeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCC--eEEEEECCCCccccc
Q 037288 257 CTVWTADFCTNPSQAVIGTN-LGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNG--AIVTVDVRKRQRGCS 333 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~-~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg--~i~iwd~~~~~~~~~ 333 (513)
.....++|+++++++++... +.|++||..++............. ++|+++++.|+++..++ .|.++|.........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 46789999999997777654 569999999887766555433344 99999999999988866 799998865543111
Q ss_pred cccccc-cCcCeEEEeeCC---eEEEeE-------eecccCcccceeEe-ec-CCCce--EEEEEcC-CCCEEEEEecCC
Q 037288 334 SRAGRR-HRIPYSRLQRND---RVTNEQ-------WFELKANIWPSHTT-FM-PSSIS--CLQSLQL-YDQYFLASSMDG 397 (513)
Q Consensus 334 ~~~~~~-h~~~v~~v~~~~---~~~s~~-------w~~~~~~~~~~~~~-~~-~~~v~--~~~~~~~-~~~~l~s~s~dg 397 (513)
+..+.. ....+.+++++| .++... |+...+........ .. ..... +-++++| ++.++++-..++
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 111112 345566777776 344332 33333221110000 10 11111 1347778 466666666788
Q ss_pred eEEEEecCCCCccceEEecCCC---C----------ceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEecCC-
Q 037288 398 TVKLYDHRLTTRGAVQSYEGHV---N----------SHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGELVFEDKFS- 462 (513)
Q Consensus 398 ~i~lwd~~~~~~~~~~~~~~h~---~----------~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~~~~~~~~~- 462 (513)
.|+.||.. .. +..+.++. + ......++++++|+++++-. .++.|+.|++.+++..... .+
T Consensus 290 ~I~~~~~~---g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~-g~~ 364 (409)
T 3hrp_A 290 SVYKITPD---GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA-GQV 364 (409)
T ss_dssp EEEEECTT---CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE-ECT
T ss_pred EEEEEecC---CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe-CCC
Confidence 99999974 22 33443332 0 01123489999999888877 8999999998888754432 22
Q ss_pred --------------CCCeEEEEEcCCCceEEeeCCC
Q 037288 463 --------------NSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 463 --------------~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
-.....+++++++.++++....
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n 400 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWG 400 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTT
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCC
Confidence 1358899999998888877654
No 199
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.90 E-value=4.5e-07 Score=85.98 Aligned_cols=189 Identities=7% Similarity=-0.042 Sum_probs=123.8
Q ss_pred eccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEeee-----CCCeEEEEEecCCcEEEE----Ee------
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCRS-----KSDILAQQVIHSGNVVLC----GF------ 315 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~~-----~~~V~~l~~~~~~~~l~s----g~------ 315 (513)
+..+...+.+++++++|+++++.. +++|.+||..+++....... ...+..++++|+|+++++ |+
T Consensus 64 ~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~ 143 (296)
T 3e5z_A 64 EMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG 143 (296)
T ss_dssp EESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGS
T ss_pred EECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccc
Confidence 444667899999999999887775 46799999988886554431 234678999999998887 33
Q ss_pred -------CCCeEEEEECCCCccccccccccccCcCeEEEeeCC--e-EEEeE-------eecc-cCcc-cceeEee-cCC
Q 037288 316 -------RNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND--R-VTNEQ-------WFEL-KANI-WPSHTTF-MPS 375 (513)
Q Consensus 316 -------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~--~-~~s~~-------w~~~-~~~~-~~~~~~~-~~~ 375 (513)
..+.|..+|.. ++ +..+..+......++|+| . +++.. |+.. .+.+ .....+. ...
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~----~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 218 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPD-GT----LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG 218 (296)
T ss_dssp SCCCCCSSSCEEEEECTT-SC----EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS
T ss_pred ccccccCCCcEEEEECCC-CC----EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC
Confidence 13466666654 32 334455666778999988 3 33332 5554 3332 1112221 122
Q ss_pred CceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEE-cCCCCEEEEEeCCCcEEEEeCCCCe
Q 037288 376 SISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGV-DQSERFVMSGGEDCKLRIWSIRSGE 454 (513)
Q Consensus 376 ~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~-s~~g~~l~sg~~Dg~v~vwd~~~~~ 454 (513)
.+.. +.++++|+++++. ++.|.+||. ....+..+..+.. +.. ++| +|+++.|++++.+ .+.-++..+.+
T Consensus 219 ~p~~-i~~d~~G~l~v~~--~~~v~~~~~---~g~~~~~~~~~~~-~~~--~~f~~~d~~~L~v~t~~-~l~~~~~~~~~ 288 (296)
T 3e5z_A 219 KTDG-LRVDAGGLIWASA--GDGVHVLTP---DGDELGRVLTPQT-TSN--LCFGGPEGRTLYMTVST-EFWSIETNVRG 288 (296)
T ss_dssp CCCS-EEEBTTSCEEEEE--TTEEEEECT---TSCEEEEEECSSC-CCE--EEEESTTSCEEEEEETT-EEEEEECSCCB
T ss_pred CCCe-EEECCCCCEEEEc--CCeEEEECC---CCCEEEEEECCCC-cee--EEEECCCCCEEEEEcCC-eEEEEEccccc
Confidence 2333 4778899876665 889999997 3446777776766 666 677 6899999888876 45556666655
Q ss_pred E
Q 037288 455 L 455 (513)
Q Consensus 455 ~ 455 (513)
+
T Consensus 289 ~ 289 (296)
T 3e5z_A 289 L 289 (296)
T ss_dssp C
T ss_pred c
Confidence 4
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.87 E-value=1.9e-07 Score=87.07 Aligned_cols=189 Identities=7% Similarity=-0.091 Sum_probs=122.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccc
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSR 335 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 335 (513)
..+.+++++++|+++++..++.|.+||..+........ ....+.+++++++|+++++...++.|.+||..+.....
T Consensus 67 ~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~--- 143 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV--- 143 (270)
T ss_dssp CSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE---
T ss_pred CCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe---
Confidence 46788999999997776666679999988665433222 22568999999999988887788999999765543211
Q ss_pred cccccCcCeEEEeeCC--eEEEeE--------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecC
Q 037288 336 AGRRHRIPYSRLQRND--RVTNEQ--------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHR 405 (513)
Q Consensus 336 ~~~~h~~~v~~v~~~~--~~~s~~--------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~ 405 (513)
........+..+++++ .++.+. |+........ ........+.. +.++++|.++++...++.|.+||..
T Consensus 144 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~p~~-i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-LPFTDITAPWG-IAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-CCCSSCCSEEE-EEECTTCCEEEEETTTSCEEEECTT
T ss_pred eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-ecccCCCCceE-EEECCCCCEEEEECCCCcEEEEcCC
Confidence 1222334567788876 333332 4433222110 00011133444 4778888877777778899999985
Q ss_pred CCCccceEEec-CCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE
Q 037288 406 LTTRGAVQSYE-GHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGEL 455 (513)
Q Consensus 406 ~~~~~~~~~~~-~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~ 455 (513)
........ .+...... ++++++|+++++...++.|+++++...+.
T Consensus 222 ---~~~~~~~~~~~~~~p~~--i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 222 ---STTSTVLPFTGLNTPLA--VAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp ---CSCCEECCCCSCSCEEE--EEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred ---CCcceeeccCCCCCcee--EEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 22222222 23233444 88999999888888999999999876543
No 201
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.86 E-value=2.8e-07 Score=98.63 Aligned_cols=213 Identities=6% Similarity=-0.077 Sum_probs=128.4
Q ss_pred cccCcEEEEEEcCCCCEEEEEe-----C-CeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCC---------
Q 037288 254 SFKCTVWTADFCTNPSQAVIGT-----N-LGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNG--------- 318 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~s~s-----~-~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg--------- 318 (513)
+|...+..++|||||++||.+. + ..|++||+.+++.+..........+++|+ ||+.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 3556788999999999998542 2 23899999999865432222123678899 999888887774
Q ss_pred ----eEEEEECCCCcccc-ccccccc-cCcCeEEEeeCC---eE-EEeE----------eecccCcccceeEeecCCCce
Q 037288 319 ----AIVTVDVRKRQRGC-SSRAGRR-HRIPYSRLQRND---RV-TNEQ----------WFELKANIWPSHTTFMPSSIS 378 (513)
Q Consensus 319 ----~i~iwd~~~~~~~~-~~~~~~~-h~~~v~~v~~~~---~~-~s~~----------w~~~~~~~~~~~~~~~~~~v~ 378 (513)
.|++|++.+..... .+..... |...+..+.|+| .+ ++.. +++..+...............
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 49999998765422 0223334 555678889998 22 2222 333333211122222222333
Q ss_pred EEEEEcCCCCEEE-EEecC---CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCC---cEEEEeCC
Q 037288 379 CLQSLQLYDQYFL-ASSMD---GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDC---KLRIWSIR 451 (513)
Q Consensus 379 ~~~~~~~~~~~l~-s~s~d---g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg---~v~vwd~~ 451 (513)
.. +++++..|+ ....+ +.|..+|+..........+..|...+ + .|++++++|+....++ .|++|++.
T Consensus 285 ~~--~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~--~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 285 SL--VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV--L--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp EE--EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC--E--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred EE--EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE--E--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 32 444555554 44333 67899998632222345666676654 2 7788898887766544 68999988
Q ss_pred CCeEEEEecC-CCCCeEEEEEcCC
Q 037288 452 SGELVFEDKF-SNSVPSAVCWRTQ 474 (513)
Q Consensus 452 ~~~~~~~~~~-~~~~v~~v~~~p~ 474 (513)
.+. ...+.. ....+..+.++++
T Consensus 359 g~~-~~~l~~p~~~~~~~~~~~~d 381 (693)
T 3iuj_A 359 GKR-VREVALPGLGSVSGFNGKHD 381 (693)
T ss_dssp SCE-EEEECCSSSSEEEECCCCTT
T ss_pred CCe-eEEeecCCCceEEeeecCCC
Confidence 554 344432 3345667777776
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.85 E-value=1.1e-06 Score=91.21 Aligned_cols=206 Identities=12% Similarity=0.063 Sum_probs=130.8
Q ss_pred CCCEEEEE-eCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECC--CCccccccccccccCcC
Q 037288 267 NPSQAVIG-TNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR--KRQRGCSSRAGRRHRIP 343 (513)
Q Consensus 267 ~g~~l~s~-s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~--~~~~~~~~~~~~~h~~~ 343 (513)
.+.++++. .++.|.++|..+++.+..+.....+..+.|+|||+++++++.|+.|.+||+. +.+. +..+.... .
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~---v~~i~~G~-~ 241 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT---VAEIKIGS-E 241 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE---EEEEECCS-E
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcE---eEEEecCC-C
Confidence 33444455 3566999999999998888877778899999999999999999999999996 4443 23443322 3
Q ss_pred eEEEeeC----C---eEEEeE--------eecccCcccceeEeec-----------CC-CceEEEEEcCCCCEE-EEEec
Q 037288 344 YSRLQRN----D---RVTNEQ--------WFELKANIWPSHTTFM-----------PS-SISCLQSLQLYDQYF-LASSM 395 (513)
Q Consensus 344 v~~v~~~----~---~~~s~~--------w~~~~~~~~~~~~~~~-----------~~-~v~~~~~~~~~~~~l-~s~s~ 395 (513)
...++|+ | .++.+. +|..+.+. ...+.. +. .+..+ ..++++..+ +....
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~--~~~i~~~~~~~~~~~~~p~~rva~i-~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP--KKIQSTRGMTYDEQEYHPEPRVAAI-LASHYRPEFIVNVKE 318 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE--EEEEECCEECTTTCCEESCCCEEEE-EECSSSSEEEEEETT
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE--EEEEeccccccccccccCCCceEEE-EEcCCCCEEEEEecC
Confidence 4688888 5 444444 44333332 222221 12 34444 445555544 44456
Q ss_pred CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEecC-CCCC--eEEEE-
Q 037288 396 DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGELVFEDKF-SNSV--PSAVC- 470 (513)
Q Consensus 396 dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~~~~~~~~-~~~~--v~~v~- 470 (513)
+|.|.++|........+..+.. .... ..+.|+|+|++++++. .++.|.++|+.+++++..+.. ...+ -....
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~-~~~~--~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~ 395 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISA-ERFL--HDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF 395 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEEC-CSSE--EEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE
T ss_pred CCeEEEEecCCCccceeeeeec-cccc--cCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee
Confidence 7999999986221112333322 1222 2478999999987665 578999999999998877654 2111 11222
Q ss_pred EcCC-CceEEeeC
Q 037288 471 WRTQ-RSMGPQIE 482 (513)
Q Consensus 471 ~~p~-~~~~~t~~ 482 (513)
++|+ +.+++++.
T Consensus 396 ~~p~~g~v~~t~~ 408 (567)
T 1qks_A 396 VHPTFGPVWATSH 408 (567)
T ss_dssp EETTTEEEEEEEB
T ss_pred ECCCCCcEEEeCC
Confidence 5776 66677664
No 203
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.83 E-value=7.5e-07 Score=84.97 Aligned_cols=221 Identities=9% Similarity=0.020 Sum_probs=132.6
Q ss_pred eEEeccccCcEEEEEEcCCCC-EEEEEe-CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 249 MHLVASFKCTVWTADFCTNPS-QAVIGT-NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~-~l~s~s-~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
+..+...........|+++|+ +++++. ++.|..|+. ++...........+..++++++|+++++...++.|..||..
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 344555556778899999998 455554 456999998 45544334455668999999999977776667889999975
Q ss_pred CCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEE----Eec-------
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLA----SSM------- 395 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s----~s~------- 395 (513)
++.. .+..+... .. ...+.. +.++++|+++++ |..
T Consensus 116 -g~~~----~~~~~~~~-------------------------~~---~~~~~~-i~~d~dG~l~~td~~~g~~~~~~~~~ 161 (305)
T 3dr2_A 116 -GQAH----LLVGRYAG-------------------------KR---LNSPND-LIVARDGAIWFTDPPFGLRKPSQGCP 161 (305)
T ss_dssp -SCEE----EEECEETT-------------------------EE---CSCCCC-EEECTTSCEEEECCSGGGSCGGGSCC
T ss_pred -CCEE----EEEeccCC-------------------------Cc---cCCCCC-EEECCCCCEEEeCcCCCccccccccc
Confidence 3321 11110000 00 011122 356778887776 332
Q ss_pred ------CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCeEEE--Ee-c
Q 037288 396 ------DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED------CKLRIWSIRSGELVF--ED-K 460 (513)
Q Consensus 396 ------dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D------g~v~vwd~~~~~~~~--~~-~ 460 (513)
.+.|..||.. .+.+..+. ....... ++|+|+++.|+.+..+ +.|++|++..+.+.. .+ .
T Consensus 162 ~~~~~~~~~v~~~d~~---~g~~~~~~-~~~~p~g--l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~ 235 (305)
T 3dr2_A 162 ADPELAHHSVYRLPPD---GSPLQRMA-DLDHPNG--LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS 235 (305)
T ss_dssp CCCSSSCEEEEEECSS---SCCCEEEE-EESSEEE--EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEEC
T ss_pred cccccCCCeEEEEcCC---CCcEEEEe-cCCCCcc--eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEE
Confidence 2457777763 22222222 2222233 8899999988777665 789999987654211 11 1
Q ss_pred CCCCCeEEEEEcCCCceEEeeCCCee---------eeec---------cCCcccceeeeeeccceeeee
Q 037288 461 FSNSVPSAVCWRTQRSMGPQIEGKIH---------EEFD---------LGQRHSWEAWIGTQEGLFRMN 511 (513)
Q Consensus 461 ~~~~~v~~v~~~p~~~~~~t~~~~~~---------~~~~---------~~~~~~~~~~~gs~~g~~~~~ 511 (513)
.....+..+++.+++.++++....+. ..+. |. ......|+++..|++++.
T Consensus 236 ~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~~g~~~~~~~~~~~~~~~~f~-~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 236 VPDGLPDGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTPGTASNCTFD-QAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp CSSSCCCSEEECTTSCEEECCSSEEEEECTTSCEEEEEECSSCCCEEEEC-TTSCEEEEEETTEEEEEE
T ss_pred CCCCCCCeEEECCCCCEEEecCCcEEEECCCCCEEEEEECCCceeEEEEe-CCCCEEEEEcCCeEEEEE
Confidence 12334567888888777777655444 1111 11 223357888888888764
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.81 E-value=9.4e-06 Score=76.41 Aligned_cols=215 Identities=7% Similarity=-0.038 Sum_probs=138.7
Q ss_pred cccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEe-e-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcc
Q 037288 254 SFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVC-R-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQR 330 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~-~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~ 330 (513)
.....+.++++.++|.++++.. ++.|.+||.. ++..... . ....+.++++.++|++.++...++.|..+|.. ++.
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 3446789999999999887764 5779999988 6544322 1 23568999999999988877778999999987 432
Q ss_pred ccccccccccCcCeEEEeeCC--eEEEeE--------eecccCcccceeEee-cCCCceEEEEEcCCCCEEEEEecCCeE
Q 037288 331 GCSSRAGRRHRIPYSRLQRND--RVTNEQ--------WFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFLASSMDGTV 399 (513)
Q Consensus 331 ~~~~~~~~~h~~~v~~v~~~~--~~~s~~--------w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~s~dg~i 399 (513)
. ...+......+..+++.+ .++.+. ++.. +... ..... ....+.. ..+.++++++++...++.|
T Consensus 95 ~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~-i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 95 T--EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAF-ITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp E--EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEE-EEECTTSSEEEEETTTTEE
T ss_pred E--EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCcee-EEECCCCCEEEEecCCCeE
Confidence 1 112233345678888876 333322 3322 2221 11111 1223444 4677889877766667889
Q ss_pred EEEecCCCCccceEEec--CCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE-ecCCCCCeEEEEEcCCCc
Q 037288 400 KLYDHRLTTRGAVQSYE--GHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFE-DKFSNSVPSAVCWRTQRS 476 (513)
Q Consensus 400 ~lwd~~~~~~~~~~~~~--~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~-~~~~~~~v~~v~~~p~~~ 476 (513)
..+|.. .. +..+. .+..... .++++++|++.++...++.|.+|+. +++.... +......+.++++.+++.
T Consensus 170 ~~~~~~---g~-~~~~~~~~~~~~~~--~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 170 GRITNT---GK-LEEYPLPTNAAAPV--GITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE 242 (300)
T ss_dssp EEECTT---CC-EEEEECSSTTCCEE--EEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred EEECCC---Cc-EEEeeCCCCCCCcc--eEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC
Confidence 999873 22 22232 2333343 4888999987777777788999998 5554443 333456689999999977
Q ss_pred eEEeeC
Q 037288 477 MGPQIE 482 (513)
Q Consensus 477 ~~~t~~ 482 (513)
++++..
T Consensus 243 l~v~~~ 248 (300)
T 2qc5_A 243 IWFTEW 248 (300)
T ss_dssp EEEEET
T ss_pred EEEecc
Confidence 777763
No 205
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.79 E-value=8.9e-08 Score=92.45 Aligned_cols=179 Identities=11% Similarity=0.006 Sum_probs=114.6
Q ss_pred cEEEEEEcCCCCEEEEE-eCCeEEEEECCCCcEEEEe-eeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccc
Q 037288 258 TVWTADFCTNPSQAVIG-TNLGAAMVDMETGMASWVC-RSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSR 335 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~-s~~~i~vwd~~~~~~~~~~-~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 335 (513)
.|.++.|++++..++.. +++.++.| .+.....+ .+...+.+++|+++|++++++..++.|.+||..+++...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~--- 80 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR--- 80 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE---
T ss_pred ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE---
Confidence 46677888877766543 45567888 23333333 355568999999999988888899999999998765322
Q ss_pred cccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC----CeEEEEecCCCCccc
Q 037288 336 AGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD----GTVKLYDHRLTTRGA 411 (513)
Q Consensus 336 ~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d----g~i~lwd~~~~~~~~ 411 (513)
....+...+.+ +.++++++++++...+ +.|.+||.. ....
T Consensus 81 ~~~~~~~~~~~----------------------------------i~~~~dg~l~v~~~~~~~~~~~i~~~d~~--~~~~ 124 (333)
T 2dg1_A 81 PFVSHKANPAA----------------------------------IKIHKDGRLFVCYLGDFKSTGGIFAATEN--GDNL 124 (333)
T ss_dssp EEECSSSSEEE----------------------------------EEECTTSCEEEEECTTSSSCCEEEEECTT--SCSC
T ss_pred EeeCCCCCcce----------------------------------EEECCCCcEEEEeCCCCCCCceEEEEeCC--CCEE
Confidence 11112222333 3567789888777666 689999985 2222
Q ss_pred eEEec--CCCCceeEEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCc-eEEee
Q 037288 412 VQSYE--GHVNSHTRIQLGVDQSERFVMSGGE------DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRS-MGPQI 481 (513)
Q Consensus 412 ~~~~~--~h~~~v~~~~~~~s~~g~~l~sg~~------Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~-~~~t~ 481 (513)
...+. .+...+. .+.++|+|+++++... .+.|..+|..+++..... .....+..++|+|++. ++++.
T Consensus 125 ~~~~~~~~~~~~~~--~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 125 QDIIEDLSTAYCID--DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTE 200 (333)
T ss_dssp EEEECSSSSCCCEE--EEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEE
T ss_pred EEEEccCccCCccc--ceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEe
Confidence 22232 2233343 4889999988777654 356777776665544332 2234578999999964 55554
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.79 E-value=1.1e-05 Score=76.07 Aligned_cols=213 Identities=4% Similarity=-0.108 Sum_probs=136.4
Q ss_pred ccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee--eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccc
Q 037288 255 FKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR--SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRG 331 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~--~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 331 (513)
+...+.++++.++|.++++.. ++.|..+|.. ++...... ....+.++++.++|+++++...++.|..+|.. ++..
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 346789999999999877765 5669999988 65433221 23568999999999988887778899999987 4322
Q ss_pred cccccccccCcCeEEEeeCC--eEEEeE--------eecccCcccceeEeec---CCCceEEEEEcCCCCEEEEEecCCe
Q 037288 332 CSSRAGRRHRIPYSRLQRND--RVTNEQ--------WFELKANIWPSHTTFM---PSSISCLQSLQLYDQYFLASSMDGT 398 (513)
Q Consensus 332 ~~~~~~~~h~~~v~~v~~~~--~~~s~~--------w~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~s~s~dg~ 398 (513)
. ..+......+..+.+.+ .++.+. ++. .+... .+.. ...+.. +.+.++++++++....+.
T Consensus 138 ~--~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~---~~~~~~~~~~~~~-i~~d~~g~l~v~~~~~~~ 210 (300)
T 2qc5_A 138 E--YDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE---EYPLPTNAAAPVG-ITSGNDGALWFVEIMGNK 210 (300)
T ss_dssp E--EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE---EEECSSTTCCEEE-EEECTTSSEEEEETTTTE
T ss_pred E--ccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE---EeeCCCCCCCcce-EEECCCCCEEEEccCCCE
Confidence 1 12333445678888877 333322 333 22221 1221 123444 467788887777666788
Q ss_pred EEEEecCCCCccce-EEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE-ecCCCCCeEEEEEcCCCc
Q 037288 399 VKLYDHRLTTRGAV-QSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFE-DKFSNSVPSAVCWRTQRS 476 (513)
Q Consensus 399 i~lwd~~~~~~~~~-~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~-~~~~~~~v~~v~~~p~~~ 476 (513)
|.+||.. .... ..+..+...+. .++++++|++.++...++.|..||. +++.... +......+.+++..+++.
T Consensus 211 i~~~~~~---g~~~~~~~~~~~~~~~--~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~ 284 (300)
T 2qc5_A 211 IGRITTT---GEISEYDIPTPNARPH--AITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGS 284 (300)
T ss_dssp EEEECTT---CCEEEEECSSTTCCEE--EEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSC
T ss_pred EEEEcCC---CcEEEEECCCCCCCce--EEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCC
Confidence 9999972 2221 12223333343 4888999987777666799999998 4544322 333345578899998876
Q ss_pred eEEeeC
Q 037288 477 MGPQIE 482 (513)
Q Consensus 477 ~~~t~~ 482 (513)
++++..
T Consensus 285 l~v~~~ 290 (300)
T 2qc5_A 285 VWFALK 290 (300)
T ss_dssp EEEECS
T ss_pred EEEEcc
Confidence 666654
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.78 E-value=1.5e-05 Score=78.28 Aligned_cols=212 Identities=6% Similarity=-0.160 Sum_probs=124.2
Q ss_pred EEEEcCCCCEEEEEe-----------CCeEEEEECCCCcEEEEeeeC--------CCeEEEEEecCCcEEEEEeC--CCe
Q 037288 261 TADFCTNPSQAVIGT-----------NLGAAMVDMETGMASWVCRSK--------SDILAQQVIHSGNVVLCGFR--NGA 319 (513)
Q Consensus 261 ~~~~s~~g~~l~s~s-----------~~~i~vwd~~~~~~~~~~~~~--------~~V~~l~~~~~~~~l~sg~~--dg~ 319 (513)
.++++|||+++.++. ++.|.+||..+.+.+..+... .....+.|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 999999999888764 356899999988877665432 23468899999999998874 578
Q ss_pred EEEEECCCCcccccccc-ccccCcCeEEEeeCC-eEEEeE-------eecccCcccceeE----eecCCCceEEEEEcCC
Q 037288 320 IVTVDVRKRQRGCSSRA-GRRHRIPYSRLQRND-RVTNEQ-------WFELKANIWPSHT----TFMPSSISCLQSLQLY 386 (513)
Q Consensus 320 i~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~~~-~~~s~~-------w~~~~~~~~~~~~----~~~~~~v~~~~~~~~~ 386 (513)
|.++| .+++... . +.... .+......+ .+++.+ ++. .++...... +.....+.....+.++
T Consensus 150 v~viD-~t~~~~~---~~i~~~~-~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDD---QLLSSPT-CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEe---EEcCCCc-eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 8776533 3 22111 111111111 111111 233 222110000 0011111111233444
Q ss_pred CCEEEEEecCCeEEEEecCCCCccceEEecCC----------CCceeEEEEEEcCCCCEEEEEeC----------CCcEE
Q 037288 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGH----------VNSHTRIQLGVDQSERFVMSGGE----------DCKLR 446 (513)
Q Consensus 387 ~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h----------~~~v~~~~~~~s~~g~~l~sg~~----------Dg~v~ 446 (513)
+..++..+.++.+.+.|+.......+..+.-. .... ..+.++|+++.|+.+.. ++.|.
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~--~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGW--QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT 301 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCce--EeEEECCCCCEEEEEeccCCcccccCCCCeEE
Confidence 44444445778999999852111122233211 1111 22678999998877653 35799
Q ss_pred EEeCCCCeEEEEecCCCCCeEEEEEcCCCc--eEEee
Q 037288 447 IWSIRSGELVFEDKFSNSVPSAVCWRTQRS--MGPQI 481 (513)
Q Consensus 447 vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~--~~~t~ 481 (513)
+.|+.+++.+..+.. .....+++|+|++. ++++.
T Consensus 302 VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 302 SVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred EEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEc
Confidence 999999999999865 33588999999965 45544
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.76 E-value=2e-06 Score=81.98 Aligned_cols=187 Identities=9% Similarity=0.025 Sum_probs=121.1
Q ss_pred ccCcEEEEEEcCC-CCEEEEEeCCeEEEEECCCCcEEEE-eee-----CCCeEEEEEecCCcEEEEEeCC----------
Q 037288 255 FKCTVWTADFCTN-PSQAVIGTNLGAAMVDMETGMASWV-CRS-----KSDILAQQVIHSGNVVLCGFRN---------- 317 (513)
Q Consensus 255 h~~~V~~~~~s~~-g~~l~s~s~~~i~vwd~~~~~~~~~-~~~-----~~~V~~l~~~~~~~~l~sg~~d---------- 317 (513)
+...+.+++++++ |+++++...++|.+||.. ++.... ... ...+.+++++++|+++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBT
T ss_pred CCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccccc
Confidence 4567899999999 887777666689999998 776544 321 1347899999999988777655
Q ss_pred -----CeEEEEECCCCccccccccccccCcCeEEEeeC----C---eEEEeE--------eecc-cCcccceeEee-cC-
Q 037288 318 -----GAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRN----D---RVTNEQ--------WFEL-KANIWPSHTTF-MP- 374 (513)
Q Consensus 318 -----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~----~---~~~s~~--------w~~~-~~~~~~~~~~~-~~- 374 (513)
+.|..||.. ++. ..+..+......++++ + .++.+. |+.. .+.......+. ..
T Consensus 148 ~~~~~~~l~~~~~~-g~~----~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 148 MQEKFGSIYCFTTD-GQM----IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp TSSSCEEEEEECTT-SCE----EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred ccCCCCeEEEECCC-CCE----EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 567777765 332 2223333455777777 6 233321 5443 22221111111 11
Q ss_pred ---CCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEE-EEeCCCcEEEEeC
Q 037288 375 ---SSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVM-SGGEDCKLRIWSI 450 (513)
Q Consensus 375 ---~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~-sg~~Dg~v~vwd~ 450 (513)
..... +.++++|+++++...++.|.+||.. ....+..+..+...+.. ++|+++|+.|+ +...++.|..|++
T Consensus 223 ~~~~~p~~-i~~d~~G~l~v~~~~~~~i~~~d~~--~g~~~~~~~~~~~~~~~--i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 223 THEGGADG-MDFDEDNNLLVANWGSSHIEVFGPD--GGQPKMRIRCPFEKPSN--LHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CSSCEEEE-EEEBTTCCEEEEEETTTEEEEECTT--CBSCSEEEECSSSCEEE--EEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCc-eEECCCCCEEEEEcCCCEEEEEcCC--CCcEeEEEeCCCCCcee--EEECCCCCEEEEEeCCCCeEEEEeC
Confidence 22333 4778899988888788999999985 24456666666555555 78899999555 4455688999998
Q ss_pred CC
Q 037288 451 RS 452 (513)
Q Consensus 451 ~~ 452 (513)
..
T Consensus 298 ~~ 299 (314)
T 1pjx_A 298 QR 299 (314)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 209
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.75 E-value=1.3e-06 Score=84.96 Aligned_cols=215 Identities=9% Similarity=-0.057 Sum_probs=129.0
Q ss_pred cccCcEEEEEEcCCCCEEEEEe------CCeEEEEECCCCcEEEEeeeC-------CCeEEEEEecCC-cEEEEEe---C
Q 037288 254 SFKCTVWTADFCTNPSQAVIGT------NLGAAMVDMETGMASWVCRSK-------SDILAQQVIHSG-NVVLCGF---R 316 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~s~s------~~~i~vwd~~~~~~~~~~~~~-------~~V~~l~~~~~~-~~l~sg~---~ 316 (513)
+|-..+..++++++++++++.. +..|.+||+.+++.+..+... ..+..+++++++ .++++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 4557899999999998777653 367999999999866655422 246899999865 4445554 6
Q ss_pred CCeEEEEECCCCccccccccccccCcCeE-EEeeC--C-eEEEeEeecccCcccceeEee-cCCCceEEEEEcCCCCEEE
Q 037288 317 NGAIVTVDVRKRQRGCSSRAGRRHRIPYS-RLQRN--D-RVTNEQWFELKANIWPSHTTF-MPSSISCLQSLQLYDQYFL 391 (513)
Q Consensus 317 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~-~v~~~--~-~~~s~~w~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~ 391 (513)
++.|.+||+.+++... .+.+|..... ...+. . .+.... ..+ .+. ....+.. ++++++++.|+
T Consensus 144 ~~~i~v~d~~~g~~~r---~~~~~~~~~~~~~~~~~~g~~~~~~~---~~g------~~~~~~~~~~g-ia~s~dg~~ly 210 (343)
T 2qe8_A 144 KAALIRVDLQTGLAAR---VLQGYPGIAPEDIDLVIDGVPVQIGQ---PDG------TVIRPHLGVNG-IVLDAENEWLY 210 (343)
T ss_dssp GCEEEEEETTTCCEEE---ECTTCTTTSCCSCCCEETTEECBEEC---TTS------CEECCCCCEEE-EEECTTSCEEE
T ss_pred CCeEEEEECCCCCEEE---EecCCCcccccccceeECCEEEEecc---CCC------ceeceecccce-eEeccCCCEEE
Confidence 8899999998765422 3333211100 00000 0 000000 000 000 0112233 58899999888
Q ss_pred EEecCC-eEEEEecCCCCc-----c----ceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC
Q 037288 392 ASSMDG-TVKLYDHRLTTR-----G----AVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF 461 (513)
Q Consensus 392 s~s~dg-~i~lwd~~~~~~-----~----~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~ 461 (513)
++..++ .+..++...... . .+. ..++...... ++++++|.++++...++.|.+||..+++.......
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~pdg--ia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~ 287 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIE-RYSEKPICDG--ISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD 287 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE-EEEECCSCSC--EEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceE-ecccCCCCce--EEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC
Confidence 887766 454444320000 0 011 1122222233 78899999999988899999999866765433332
Q ss_pred -CCCCeEEEEEcCCCceEEeeCCC
Q 037288 462 -SNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 462 -~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
....+.++++.+++.+++++...
T Consensus 288 ~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 288 EKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp GGGSCEEEEEECTTSCEEEEECCG
T ss_pred CceecCCeeEECCCCcEEEEeCcc
Confidence 23458999999998777777654
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.74 E-value=1.6e-06 Score=82.64 Aligned_cols=187 Identities=9% Similarity=0.009 Sum_probs=118.0
Q ss_pred eccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEeee-----CCCeEEEEEecCCcEEEE----EeC-----
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCRS-----KSDILAQQVIHSGNVVLC----GFR----- 316 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~~-----~~~V~~l~~~~~~~~l~s----g~~----- 316 (513)
+..+...+..++++++|+++++.. +++|.+||.. ++....... ...+..++++++|++.++ |..
T Consensus 81 ~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~ 159 (305)
T 3dr2_A 81 LLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQG 159 (305)
T ss_dssp EEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGS
T ss_pred EeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccc
Confidence 334556789999999999777654 3579999986 654443321 134678999999998886 432
Q ss_pred --------CCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCC
Q 037288 317 --------NGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQ 388 (513)
Q Consensus 317 --------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 388 (513)
.+.|..+|..+++... +. ... .... .+++++++
T Consensus 160 ~~~~~~~~~~~v~~~d~~~g~~~~----~~-~~~---------------------------------~p~g-l~~spdg~ 200 (305)
T 3dr2_A 160 CPADPELAHHSVYRLPPDGSPLQR----MA-DLD---------------------------------HPNG-LAFSPDEQ 200 (305)
T ss_dssp CCCCCSSSCEEEEEECSSSCCCEE----EE-EES---------------------------------SEEE-EEECTTSS
T ss_pred cccccccCCCeEEEEcCCCCcEEE----Ee-cCC---------------------------------CCcc-eEEcCCCC
Confidence 2456667765554221 10 100 1112 46788999
Q ss_pred EEEEEecC------CeEEEEecCCCCcc--ceEEe-cCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 037288 389 YFLASSMD------GTVKLYDHRLTTRG--AVQSY-EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFED 459 (513)
Q Consensus 389 ~l~s~s~d------g~i~lwd~~~~~~~--~~~~~-~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~ 459 (513)
.|+++... +.|.+||+. ... ....+ ......... ++++++|++. ++..+| |.+|+. +++.+..+
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~--~~~l~~~~~~~~~~~~~pdg--i~~d~~G~lw-v~~~~g-v~~~~~-~g~~~~~~ 273 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWR--DGALHDRRHFASVPDGLPDG--FCVDRGGWLW-SSSGTG-VCVFDS-DGQLLGHI 273 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEE--TTEEEEEEEEECCSSSCCCS--EEECTTSCEE-ECCSSE-EEEECT-TSCEEEEE
T ss_pred EEEEEecCCcCCCCCEEEEEEec--CCCccCCeEEEECCCCCCCe--EEECCCCCEE-EecCCc-EEEECC-CCCEEEEE
Confidence 87777665 789999985 222 11122 111222223 6788999944 444454 999998 67777777
Q ss_pred cCCCCCeEEEEEcCC-CceEEeeCCCee
Q 037288 460 KFSNSVPSAVCWRTQ-RSMGPQIEGKIH 486 (513)
Q Consensus 460 ~~~~~~v~~v~~~p~-~~~~~t~~~~~~ 486 (513)
.... .+..++|.|+ ..+++++...+.
T Consensus 274 ~~~~-~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 274 PTPG-TASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp ECSS-CCCEEEECTTSCEEEEEETTEEE
T ss_pred ECCC-ceeEEEEeCCCCEEEEEcCCeEE
Confidence 6555 4889999988 467777766544
No 211
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.72 E-value=1.3e-07 Score=92.58 Aligned_cols=147 Identities=7% Similarity=0.003 Sum_probs=100.0
Q ss_pred CeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCc
Q 037288 298 DILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSI 377 (513)
Q Consensus 298 ~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v 377 (513)
.+..+++++...++++|+.++ +.+|++...+... ...... ..+.....++. +
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~-----~~~~~~---------------------~~~~~~~~lp~-V 90 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHI-----TSDSTP---------------------LTFKWEKEIPD-V 90 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHH-----HSSSCC---------------------CCCSEEEECTT-E
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhh-----cccccc---------------------ccceEEeeCCC-e
Confidence 589999999999999999885 5559876443100 000000 00122334555 6
Q ss_pred eEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE
Q 037288 378 SCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVF 457 (513)
Q Consensus 378 ~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~ 457 (513)
..+ .| ++.+|+++ .++.|++||++ +.........|...+.. +.+.+. .++++..||.|.+||+.+++...
T Consensus 91 ~~l-~f--d~~~L~v~-~~~~l~v~dv~--sl~~~~~~~~~~~~v~~--i~~~~p--~~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 91 IFV-CF--HGDQVLVS-TRNALYSLDLE--ELSEFRTVTSFEKPVFQ--LKNVNN--TLVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp EEE-EE--ETTEEEEE-ESSEEEEEESS--STTCEEEEEECSSCEEE--EEECSS--EEEEEETTSEEEEEETTTCCEEE
T ss_pred eEE-EE--CCCEEEEE-cCCcEEEEEch--hhhccCccceeecceee--EEecCC--CEEEEECCCCEEEEEccCCcccc
Confidence 665 45 88999998 88999999997 33344445556666544 444433 38889999999999999888754
Q ss_pred EecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 458 EDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 458 ~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
+...|++++|+|++..++..++.+.
T Consensus 161 ----~~~~Vs~v~WSpkG~~vg~~dg~i~ 185 (388)
T 1xip_A 161 ----LAQNVTSFDVTNSQLAVLLKDRSFQ 185 (388)
T ss_dssp ----EEESEEEEEECSSEEEEEETTSCEE
T ss_pred ----ccCCceEEEEcCCceEEEEcCCcEE
Confidence 2346999999999977766666655
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.72 E-value=4.5e-06 Score=81.43 Aligned_cols=230 Identities=11% Similarity=-0.024 Sum_probs=133.5
Q ss_pred CccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe-----------CCeEEEEECCCCcEEE
Q 037288 223 GGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT-----------NLGAAMVDMETGMASW 291 (513)
Q Consensus 223 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s-----------~~~i~vwd~~~~~~~~ 291 (513)
.+.+.+++..+.... ..+..-..+ . ++++|||+++.++. ++.|.+||..+++.+.
T Consensus 58 ~~~V~ViD~~t~~v~------------~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~ 123 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVI------------GMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTA 123 (386)
T ss_dssp SEEEEEEETTTTEEE------------EEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred CCEEEEEECCCCeEE------------EEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEE
Confidence 467777776643332 223222234 4 99999999776553 3569999999999887
Q ss_pred EeeeC--------CCeEEEEEecCCcEEEEEeC--CCeEEEEECCCCccccccccccc----------------cCcCeE
Q 037288 292 VCRSK--------SDILAQQVIHSGNVVLCGFR--NGAIVTVDVRKRQRGCSSRAGRR----------------HRIPYS 345 (513)
Q Consensus 292 ~~~~~--------~~V~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~----------------h~~~v~ 345 (513)
.+.-. .....++|+|||+.++++.. ++.|.++|+.+.+...++. +.+ ..+.+.
T Consensus 124 ~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~-v~g~~~~~P~g~~~~~~~~~DG~~~ 202 (386)
T 3sjl_D 124 DIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD-VPDCYHIFPTAPDTFFMHCRDGSLA 202 (386)
T ss_dssp EEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCSEEEEEEEETTEEEEEETTSCEE
T ss_pred EEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE-CCCcceeecCCCceeEEECCCCCEE
Confidence 76532 24667999999998888864 6899999999887543121 100 000111
Q ss_pred EEeeCC--eEEE-----------------------eE--eecccCcc----------cceeEee-----------cCCCc
Q 037288 346 RLQRND--RVTN-----------------------EQ--WFELKANI----------WPSHTTF-----------MPSSI 377 (513)
Q Consensus 346 ~v~~~~--~~~s-----------------------~~--w~~~~~~~----------~~~~~~~-----------~~~~v 377 (513)
-++..+ .+.. |. |....+.+ .....+. .+...
T Consensus 203 ~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~ 282 (386)
T 3sjl_D 203 KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 282 (386)
T ss_dssp EEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS
T ss_pred EEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCc
Confidence 111110 0000 00 10000000 0000000 01111
Q ss_pred eEEEEEcCCCCEEEEEec----------CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCC-EEEEE-eCCCcE
Q 037288 378 SCLQSLQLYDQYFLASSM----------DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSER-FVMSG-GEDCKL 445 (513)
Q Consensus 378 ~~~~~~~~~~~~l~s~s~----------dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~-~l~sg-~~Dg~v 445 (513)
.. ..++++++.+.+... .+.|.++|+. ..+.+..+..-. .. ..+.+++|++ .|+++ ..++.|
T Consensus 283 q~-~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~--t~kv~~~i~vg~-~~--~~lavs~D~~~~ly~tn~~~~~V 356 (386)
T 3sjl_D 283 QQ-VAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAK--TGERLAKFEMGH-EI--DSINVSQDEKPLLYALSTGDKTL 356 (386)
T ss_dssp SC-EEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETT--TCCEEEEEEEEE-EE--CEEEECSSSSCEEEEEETTTTEE
T ss_pred ce-eeECCCCCeEEEEeccccccccCCCCCEEEEEECC--CCeEEEEEECCC-Cc--ceEEECCCCCeEEEEEcCCCCeE
Confidence 11 345677777776643 2568899986 455666664221 23 3489999997 66665 458999
Q ss_pred EEEeCCCCeEEEEecCCCCCeEEEEEcCC
Q 037288 446 RIWSIRSGELVFEDKFSNSVPSAVCWRTQ 474 (513)
Q Consensus 446 ~vwd~~~~~~~~~~~~~~~~v~~v~~~p~ 474 (513)
.++|..+++.+.++.... ..+.+.++++
T Consensus 357 sViD~~t~k~~~~i~~~~-~p~~l~~s~d 384 (386)
T 3sjl_D 357 YIHDAESGEELRSVNQLG-HGPQVITTAD 384 (386)
T ss_dssp EEEETTTCCEEEEECCCC-SSCCEEEECC
T ss_pred EEEECCCCcEEEEecCCC-CCceeEECCc
Confidence 999999999999987643 3456666665
No 213
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.65 E-value=1.7e-06 Score=93.36 Aligned_cols=176 Identities=13% Similarity=0.022 Sum_probs=109.5
Q ss_pred EEEEEEcCCCCEEEEEe-CC--------------eEEEEECCCCc--EEEEeee---CCCeEEEEEecCCcEEEEEeCCC
Q 037288 259 VWTADFCTNPSQAVIGT-NL--------------GAAMVDMETGM--ASWVCRS---KSDILAQQVIHSGNVVLCGFRNG 318 (513)
Q Consensus 259 V~~~~~s~~g~~l~s~s-~~--------------~i~vwd~~~~~--~~~~~~~---~~~V~~l~~~~~~~~l~sg~~dg 318 (513)
+..++|+|| +.|+.++ ++ .|.+|++.++. ...++.. ...+.++.|+|||+.|+..+.++
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 357899999 8887664 22 28899998775 2233332 22488999999998887776544
Q ss_pred -----eEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEE
Q 037288 319 -----AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLAS 393 (513)
Q Consensus 319 -----~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 393 (513)
.|++||+.++.... ...+..+... .... +.+++..|+..
T Consensus 290 ~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~---------------------------------~~~~--~~~dg~~l~~~ 333 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGP-VTALIPDLKA---------------------------------QWDF--VDGVGDQLWFV 333 (741)
T ss_dssp TCSCCEEEEEEEETTEECC-CEEEECSSSS---------------------------------CEEE--EEEETTEEEEE
T ss_pred CCCcceEEEEECCCCCCcc-cEEecCCCCc---------------------------------eEEE--EeccCCEEEEE
Confidence 89999997662110 1122222211 1111 23678888777
Q ss_pred ecC----CeEEEEecCCCCccceEE-ecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEEEecCC-CCCe
Q 037288 394 SMD----GTVKLYDHRLTTRGAVQS-YEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIR-SGELVFEDKFS-NSVP 466 (513)
Q Consensus 394 s~d----g~i~lwd~~~~~~~~~~~-~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~-~~~~~~~~~~~-~~~v 466 (513)
+.+ +.|.+||+.... ..... +..+...+.. ++++ ++.++++...|+..+||.+. +++.+..+..+ ...+
T Consensus 334 s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~--~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v 409 (741)
T 1yr2_A 334 SGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLES--VGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSA 409 (741)
T ss_dssp ECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEE--EEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEE
T ss_pred ECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEE--EEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEE
Confidence 653 459999986211 22233 3434443333 5665 56677888889988777654 46666666543 5568
Q ss_pred EEEEEcCCC
Q 037288 467 SAVCWRTQR 475 (513)
Q Consensus 467 ~~v~~~p~~ 475 (513)
..+.++|++
T Consensus 410 ~~~~~s~d~ 418 (741)
T 1yr2_A 410 SGLSGRPGD 418 (741)
T ss_dssp EEEECCBTC
T ss_pred EEeecCCCC
Confidence 889999884
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.63 E-value=1.5e-05 Score=75.45 Aligned_cols=188 Identities=9% Similarity=0.073 Sum_probs=112.7
Q ss_pred ccCcEEEEEEcCCCC-EEEEEe-CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccc
Q 037288 255 FKCTVWTADFCTNPS-QAVIGT-NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 255 h~~~V~~~~~s~~g~-~l~s~s-~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 332 (513)
+..-.-+..|++++. ++++.. ++.|..||..++.. ..+.....+.+++++++|+++++. +..|.+||..+++...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVV 87 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEE
Confidence 334556888998554 555553 56699999998875 344556779999999999965553 5689999998765322
Q ss_pred ccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC---------CeEEEEe
Q 037288 333 SSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD---------GTVKLYD 403 (513)
Q Consensus 333 ~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d---------g~i~lwd 403 (513)
+....... + ...+.. ..++++|+++++...+ ....+|.
T Consensus 88 -~~~~~~~~-~------------------------------~~~~~d-i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~ 134 (297)
T 3g4e_A 88 -LATVDNDK-K------------------------------NNRFND-GKVDPAGRYFAGTMAEETAPAVLERHQGALYS 134 (297)
T ss_dssp -EEECCTTC-S------------------------------SEEEEE-EEECTTSCEEEEEEECCSBTTBCCTTCEEEEE
T ss_pred -EEecCCCC-C------------------------------CCCCCC-EEECCCCCEEEecCCcccccccccCCCcEEEE
Confidence 11110000 0 001122 3567888866654322 2335555
Q ss_pred cCCCCccceEEecCCCCceeEEEEEEcCCCCEEE-EEeCCCcEEEEeC--CCCeEE-----EEecCCCCCeEEEEEcCCC
Q 037288 404 HRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVM-SGGEDCKLRIWSI--RSGELV-----FEDKFSNSVPSAVCWRTQR 475 (513)
Q Consensus 404 ~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~-sg~~Dg~v~vwd~--~~~~~~-----~~~~~~~~~v~~v~~~p~~ 475 (513)
+. ..+.+..+..+...... ++|+|+++.|+ +.+.++.|.+|++ .++.+. ..+......+..+++.+++
T Consensus 135 ~d--~~g~~~~~~~~~~~png--i~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 135 LF--PDHHVKKYFDQVDISNG--LDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp EC--TTSCEEEEEEEESBEEE--EEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred EE--CCCCEEEEeeccccccc--eEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence 53 22222222222222233 88999998765 5556789999987 456532 2233334567899999997
Q ss_pred ceEEeeC
Q 037288 476 SMGPQIE 482 (513)
Q Consensus 476 ~~~~t~~ 482 (513)
.++++..
T Consensus 211 ~lwva~~ 217 (297)
T 3g4e_A 211 KLWVACY 217 (297)
T ss_dssp CEEEEEE
T ss_pred CEEEEEc
Confidence 7666654
No 215
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.61 E-value=1.4e-05 Score=73.72 Aligned_cols=185 Identities=9% Similarity=-0.058 Sum_probs=118.6
Q ss_pred EEEEEEcCCCCEEEEEe---CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEE-EEeCCCeEEEEECCCCcccccc
Q 037288 259 VWTADFCTNPSQAVIGT---NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVL-CGFRNGAIVTVDVRKRQRGCSS 334 (513)
Q Consensus 259 V~~~~~s~~g~~l~s~s---~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~ 334 (513)
...++|++++.++++.+ ++.|.++|+.+++.+..+.-........+..++..|+ +.-.++.+.++|..+.+...
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~-- 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIK-- 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEE--
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEE--
Confidence 57899999876666554 3569999999999888776433333223333454444 44458999999998876533
Q ss_pred ccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecC-CCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceE
Q 037288 335 RAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMP-SSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQ 413 (513)
Q Consensus 335 ~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~ 413 (513)
.+ ... .... .++++++.++++..++.|.++|.. ....+.
T Consensus 101 -~i----------------------------------~~g~~~g~---glt~Dg~~l~vs~gs~~l~viD~~--t~~v~~ 140 (266)
T 2iwa_A 101 -NF----------------------------------THQMKDGW---GLATDGKILYGSDGTSILYEIDPH--TFKLIK 140 (266)
T ss_dssp -EE----------------------------------ECCSSSCC---EEEECSSSEEEECSSSEEEEECTT--TCCEEE
T ss_pred -EE----------------------------------ECCCCCeE---EEEECCCEEEEECCCCeEEEEECC--CCcEEE
Confidence 11 111 0011 234577777777778999999986 444455
Q ss_pred EecCCC--Ccee-EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCC-------------CCCeEEEEEcCC-Cc
Q 037288 414 SYEGHV--NSHT-RIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFS-------------NSVPSAVCWRTQ-RS 476 (513)
Q Consensus 414 ~~~~h~--~~v~-~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~-------------~~~v~~v~~~p~-~~ 476 (513)
.+.-.. .++. .-.+.+. +|...+....++.|.+-|..+++.+..+... ....+.++|+|+ ..
T Consensus 141 ~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~ 219 (266)
T 2iwa_A 141 KHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKR 219 (266)
T ss_dssp EEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTE
T ss_pred EEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCE
Confidence 544211 1111 1125555 6654444446789999999999999887542 135689999999 57
Q ss_pred eEEeeCCCee
Q 037288 477 MGPQIEGKIH 486 (513)
Q Consensus 477 ~~~t~~~~~~ 486 (513)
+|+|....-.
T Consensus 220 lfVTgk~~~~ 229 (266)
T 2iwa_A 220 IFVTGKLWPK 229 (266)
T ss_dssp EEEEETTCSE
T ss_pred EEEECCCCCe
Confidence 8888765544
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.59 E-value=5.3e-08 Score=95.83 Aligned_cols=193 Identities=12% Similarity=0.099 Sum_probs=102.2
Q ss_pred CCCEEEEEe-CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccccccccccc-----
Q 037288 267 NPSQAVIGT-NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRH----- 340 (513)
Q Consensus 267 ~g~~l~s~s-~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h----- 340 (513)
++..+++++ ++.|..||..+|+.++.+.. ..+.+..+..++.++++++.||.|+.||..+++... .+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w---~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT---KLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSE---ECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee---eeeccCcccc
Confidence 455666554 56799999999999998876 666666666778888888899999999998776532 11111
Q ss_pred -CcCeEEEeeCCeEEEeE-------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccce
Q 037288 341 -RIPYSRLQRNDRVTNEQ-------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAV 412 (513)
Q Consensus 341 -~~~v~~v~~~~~~~s~~-------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~ 412 (513)
..++.. ....++.++ ||..+++..-... .... ..++|++..+++++.|+.|+.||.+ ....+
T Consensus 84 ~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~--~~~~----~~~~p~~~~v~~~~~dg~v~a~d~~--tG~~~ 153 (369)
T 2hz6_A 84 QASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLS--SAFA----DSLSPSTSLLYLGRTEYTITMYDTK--TRELR 153 (369)
T ss_dssp TTCSCC-------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSS--SSSCC
T ss_pred ccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEec--CCCc----ccccccCCEEEEEecCCEEEEEECC--CCCEE
Confidence 111110 011222222 6666555432111 1111 1334578889999999999999997 33343
Q ss_pred EEecCCCCceeEEEEEEcCCC---CEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCce
Q 037288 413 QSYEGHVNSHTRIQLGVDQSE---RFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSM 477 (513)
Q Consensus 413 ~~~~~h~~~v~~~~~~~s~~g---~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 477 (513)
..+..+. ... ..++.+. ..+++++.||.|+.||..+|+.+.........+...++++++.+
T Consensus 154 W~~~~~~--~~~--~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 154 WNATYFD--YAA--SLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp CEEEEEE--ECC--BCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred EeEeccc--ccC--ccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceE
Confidence 3332111 111 2233322 56778899999999999999998887654433444556666654
No 217
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.58 E-value=1.9e-05 Score=72.05 Aligned_cols=185 Identities=11% Similarity=0.037 Sum_probs=118.7
Q ss_pred cccCc--EEEEEEcCCCCEEEEEe-CC--eEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEe-CCCeEEEEECCC
Q 037288 254 SFKCT--VWTADFCTNPSQAVIGT-NL--GAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGF-RNGAIVTVDVRK 327 (513)
Q Consensus 254 ~h~~~--V~~~~~s~~g~~l~s~s-~~--~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~-~dg~i~iwd~~~ 327 (513)
.|... ...+.|+ ++.++.+.+ ++ .|+++|+.+++.+....-..........+++..|+... .++.+.+||..+
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECcc
Confidence 55544 4788888 666555554 33 59999999999888877666665544445565555554 589999999998
Q ss_pred CccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 037288 328 RQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLT 407 (513)
Q Consensus 328 ~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~ 407 (513)
.+... ++. ...... .+.++++.|+.+..++.|.++|..
T Consensus 117 ~~~~~---ti~----------------------------------~~~eG~---glt~dg~~L~~SdGs~~i~~iDp~-- 154 (262)
T 3nol_A 117 LRQVR---SFN----------------------------------YDGEGW---GLTHNDQYLIMSDGTPVLRFLDPE-- 154 (262)
T ss_dssp CCEEE---EEE----------------------------------CSSCCC---CEEECSSCEEECCSSSEEEEECTT--
T ss_pred CcEEE---EEE----------------------------------CCCCce---EEecCCCEEEEECCCCeEEEEcCC--
Confidence 87533 111 111101 122466767766668889999986
Q ss_pred CccceEEecCC--CCceeEE-EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCC------------CCCeEEEEEc
Q 037288 408 TRGAVQSYEGH--VNSHTRI-QLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFS------------NSVPSAVCWR 472 (513)
Q Consensus 408 ~~~~~~~~~~h--~~~v~~~-~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~------------~~~v~~v~~~ 472 (513)
....+.++... ..++..+ .+.+. +|+..+..-.+..|.+.|..+++.+..+... ....+.+||+
T Consensus 155 T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~d 233 (262)
T 3nol_A 155 SLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWD 233 (262)
T ss_dssp TCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEE
T ss_pred CCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEc
Confidence 34455554322 1121111 14444 6654444446889999999999999887542 2457999999
Q ss_pred CC-CceEEeeC
Q 037288 473 TQ-RSMGPQIE 482 (513)
Q Consensus 473 p~-~~~~~t~~ 482 (513)
|+ ..+|+|+.
T Consensus 234 p~~~~lfVTGK 244 (262)
T 3nol_A 234 KEHHRLFVTGK 244 (262)
T ss_dssp TTTTEEEEEET
T ss_pred CCCCEEEEECC
Confidence 98 66777654
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.53 E-value=6.4e-05 Score=72.20 Aligned_cols=181 Identities=7% Similarity=-0.033 Sum_probs=108.6
Q ss_pred cEEEEEEcCCCC-EEEEEe-CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccc
Q 037288 258 TVWTADFCTNPS-QAVIGT-NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSR 335 (513)
Q Consensus 258 ~V~~~~~s~~g~-~l~s~s-~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 335 (513)
...+..|++++. ++++.. +++|..||..+++.. .+.....+.+++|+++|+++++. .+ .|.+||..+++... +.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~-~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTL-HA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEE-EE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEE-Ee
Confidence 456788999755 555553 466999999887643 33455679999999999877754 44 49999987765322 11
Q ss_pred cccc-c-CcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC----CeEEEEecCCCCc
Q 037288 336 AGRR-H-RIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD----GTVKLYDHRLTTR 409 (513)
Q Consensus 336 ~~~~-h-~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d----g~i~lwd~~~~~~ 409 (513)
.... . ...+ .. ..++++|+++++...+ +...||.+. .
T Consensus 126 ~~~~~~~~~~~---------------------------------~~-i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~- 168 (326)
T 2ghs_A 126 ELESDLPGNRS---------------------------------ND-GRMHPSGALWIGTMGRKAETGAGSIYHVA--K- 168 (326)
T ss_dssp CSSTTCTTEEE---------------------------------EE-EEECTTSCEEEEEEETTCCTTCEEEEEEE--T-
T ss_pred eCCCCCCCCCC---------------------------------CC-EEECCCCCEEEEeCCCcCCCCceEEEEEe--C-
Confidence 1100 0 0111 12 3567788876654422 223444432 1
Q ss_pred cceEEecCCCCceeEEEEEEcCCCCEEEEE-eCCCcEEEEeCC--CC-e-----EEEEecCCCCCeEEEEEcCCCceEEe
Q 037288 410 GAVQSYEGHVNSHTRIQLGVDQSERFVMSG-GEDCKLRIWSIR--SG-E-----LVFEDKFSNSVPSAVCWRTQRSMGPQ 480 (513)
Q Consensus 410 ~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg-~~Dg~v~vwd~~--~~-~-----~~~~~~~~~~~v~~v~~~p~~~~~~t 480 (513)
+.+..+..+..... .++|+|+|+.|+.+ ..++.|.+|++. ++ + .+..+......+..+++.+++.++++
T Consensus 169 g~~~~~~~~~~~~~--~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva 246 (326)
T 2ghs_A 169 GKVTKLFADISIPN--SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNA 246 (326)
T ss_dssp TEEEEEEEEESSEE--EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEE
T ss_pred CcEEEeeCCCcccC--CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEE
Confidence 22222222222223 38899999877554 557899999986 56 3 23333333455788999998766665
Q ss_pred e
Q 037288 481 I 481 (513)
Q Consensus 481 ~ 481 (513)
.
T Consensus 247 ~ 247 (326)
T 2ghs_A 247 R 247 (326)
T ss_dssp E
T ss_pred E
Confidence 5
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.46 E-value=2e-05 Score=78.18 Aligned_cols=236 Identities=6% Similarity=-0.092 Sum_probs=136.6
Q ss_pred ccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEe-----------CCeEEEEECCCCcEEEE
Q 037288 224 GSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGT-----------NLGAAMVDMETGMASWV 292 (513)
Q Consensus 224 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s-----------~~~i~vwd~~~~~~~~~ 292 (513)
+.+.++++.+.... ..+..-..+ .++++|||+.+.++. ++.|.++|..+++.+..
T Consensus 99 ~~VsVID~~t~~vv------------~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~ 164 (426)
T 3c75_H 99 TQQFVIDGSTGRIL------------GMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIAD 164 (426)
T ss_dssp EEEEEEETTTTEEE------------EEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE
T ss_pred CeEEEEECCCCEEE------------EEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEE
Confidence 67777777654332 222222234 899999999776553 45699999999998777
Q ss_pred eeeC--------CCeEEEEEecCCcEEEEEeC--CCeEEEEECCCCccccccccccccCcCeEEEeeC-CeEEEeE----
Q 037288 293 CRSK--------SDILAQQVIHSGNVVLCGFR--NGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRN-DRVTNEQ---- 357 (513)
Q Consensus 293 ~~~~--------~~V~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~-~~~~s~~---- 357 (513)
+.-. .....+.|+|||++++++.. ++.|.+.|+.+.+... .+.-... +.-.... ..+++.+
T Consensus 165 I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~---~I~v~g~-~~~~p~g~~~~v~~~~dG~ 240 (426)
T 3c75_H 165 IELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDR---MLDVPDC-YHIFPASPTVFYMNCRDGS 240 (426)
T ss_dssp EEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEE---EEECCSE-EEEEEEETTEEEEEETTSS
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEE---EEEcCCc-eeeccCCCcEEEEEcCCCC
Confidence 6532 23567899999999998874 5899999999887543 2221110 0000000 0111111
Q ss_pred ---eecccCcccceeEeec-----CCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecC---C-------C
Q 037288 358 ---WFELKANIWPSHTTFM-----PSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEG---H-------V 419 (513)
Q Consensus 358 ---w~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~---h-------~ 419 (513)
.+...++. ...... ...+.....+.+++..++..+..+.|.+.|+.......+.++.- . .
T Consensus 241 ~~~V~~~~~~v--~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 241 LARVDFADGET--KVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp EEEEECCTTCC--EEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred EEEEECCCCcE--EEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 00101110 000000 00000112356777777777788999999985211001111110 0 0
Q ss_pred CceeEEEEEEcCCCCEEEEEeC----------CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCc--eEEeeC
Q 037288 420 NSHTRIQLGVDQSERFVMSGGE----------DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRS--MGPQIE 482 (513)
Q Consensus 420 ~~v~~~~~~~s~~g~~l~sg~~----------Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~--~~~t~~ 482 (513)
..... ++++|+++.++.... ++.|.+.|+.+.+.+..+... ....+++|+|++. ++++..
T Consensus 319 ~g~~~--va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~ 390 (426)
T 3c75_H 319 GGWQQ--TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSA 390 (426)
T ss_dssp CSSSC--EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEET
T ss_pred CCcee--eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcC
Confidence 01111 578999887776642 357999999999999998653 3478999999954 666653
No 220
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.43 E-value=0.00013 Score=65.95 Aligned_cols=185 Identities=12% Similarity=0.017 Sum_probs=117.1
Q ss_pred cccC--cEEEEEEcCCCCEEEEEeC---CeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEE-EEeCCCeEEEEECCC
Q 037288 254 SFKC--TVWTADFCTNPSQAVIGTN---LGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVL-CGFRNGAIVTVDVRK 327 (513)
Q Consensus 254 ~h~~--~V~~~~~s~~g~~l~s~s~---~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~-sg~~dg~i~iwd~~~ 327 (513)
.|.. -...+.|+. +.++.+.+. ..|+.+|+.+++.+....-...........+++.|+ ..-.++.+.+||..+
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t 94 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLAT 94 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCc
Confidence 5654 356889986 555555443 369999999999988887665555444444454444 445689999999998
Q ss_pred CccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCC
Q 037288 328 RQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLT 407 (513)
Q Consensus 328 ~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~ 407 (513)
.+... ++ ........ +.+++..|+++..++.|.++|..
T Consensus 95 l~~~~---ti----------------------------------~~~~~Gwg---lt~dg~~L~vSdgs~~l~~iDp~-- 132 (243)
T 3mbr_X 95 LTPRA---RF----------------------------------RYPGEGWA---LTSDDSHLYMSDGTAVIRKLDPD-- 132 (243)
T ss_dssp TEEEE---EE----------------------------------ECSSCCCE---EEECSSCEEEECSSSEEEEECTT--
T ss_pred CcEEE---EE----------------------------------eCCCCceE---EeeCCCEEEEECCCCeEEEEeCC--
Confidence 87533 21 11111111 22466767777778999999986
Q ss_pred CccceEEecC--CCCceeEE-EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCC-------------CCCeEEEEE
Q 037288 408 TRGAVQSYEG--HVNSHTRI-QLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFS-------------NSVPSAVCW 471 (513)
Q Consensus 408 ~~~~~~~~~~--h~~~v~~~-~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~-------------~~~v~~v~~ 471 (513)
....+.++.- +..++..+ .+.+. +|+..+..-.+..|.+.|..+++.+..+... ....+++||
T Consensus 133 t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~ 211 (243)
T 3mbr_X 133 TLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAF 211 (243)
T ss_dssp TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEE
T ss_pred CCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEE
Confidence 4445555542 21121111 13333 5654444446789999999999999886422 246799999
Q ss_pred cCC-CceEEeeC
Q 037288 472 RTQ-RSMGPQIE 482 (513)
Q Consensus 472 ~p~-~~~~~t~~ 482 (513)
+|+ ..+|+|+-
T Consensus 212 d~~~~~lfVTGK 223 (243)
T 3mbr_X 212 DAEHDRLFVTGK 223 (243)
T ss_dssp ETTTTEEEEEET
T ss_pred cCCCCEEEEECC
Confidence 998 66777654
No 221
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.42 E-value=4.1e-05 Score=76.10 Aligned_cols=166 Identities=7% Similarity=0.028 Sum_probs=101.0
Q ss_pred ccCcEEEEEEcC-CCCEEEEEeCCeEEEEECCCCcEEEE----eeeC-CCe-E-EEEEecC-CcEEEEEeCCCeEEEEEC
Q 037288 255 FKCTVWTADFCT-NPSQAVIGTNLGAAMVDMETGMASWV----CRSK-SDI-L-AQQVIHS-GNVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 255 h~~~V~~~~~s~-~g~~l~s~s~~~i~vwd~~~~~~~~~----~~~~-~~V-~-~l~~~~~-~~~l~sg~~dg~i~iwd~ 325 (513)
+...+.+++++| ++.++++..++.|..||..++..... .... ..- . .++|+|+ +.++++-..++.|+.||.
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 345678899999 56655543455699999988764433 1111 112 3 9999995 677777777899999987
Q ss_pred CCCccccccccccccC---cCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe-cCCeEEE
Q 037288 326 RKRQRGCSSRAGRRHR---IPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS-MDGTVKL 401 (513)
Q Consensus 326 ~~~~~~~~~~~~~~h~---~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s-~dg~i~l 401 (513)
..... .+.++. +..... . ....+ ..... ++++++|+++++-. .++.|+.
T Consensus 297 ~g~~~-----~~~g~~~~~g~~dg~-----------------~-~~~~~---~~P~g-ia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 297 DGECE-----WFCGSATQKTVQDGL-----------------R-EEALF---AQPNG-MTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp TCCEE-----EEEECTTCCSCBCEE-----------------G-GGCBC---SSEEE-EEECTTCCEEEEETTTTCEEEE
T ss_pred CCCEE-----EEEeCCCCCCcCCCc-----------------c-cccEe---CCCeE-EEEeCCCCEEEEeCCCCCEEEE
Confidence 64311 111111 000000 0 00000 11222 47788999777777 7899999
Q ss_pred EecCCCCccceEEecCCCC-------------ceeEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 037288 402 YDHRLTTRGAVQSYEGHVN-------------SHTRIQLGVDQSERFVMSGGEDCKLRIWSI 450 (513)
Q Consensus 402 wd~~~~~~~~~~~~~~h~~-------------~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~ 450 (513)
||+. .+.+.++.++.. ......++++++|.++++-..++.|+.+++
T Consensus 350 ~~~~---~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 350 LDIL---DGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETT---TTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EECC---CCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 9973 344555554410 111244889999888888888888888765
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.42 E-value=6.9e-05 Score=72.98 Aligned_cols=205 Identities=8% Similarity=-0.120 Sum_probs=119.4
Q ss_pred EEEEcCCCCEEEEEe-----------CCeEEEEECCCCcEEEEeeeC--------CCeEEEEEecCCcEEEEEeC--CCe
Q 037288 261 TADFCTNPSQAVIGT-----------NLGAAMVDMETGMASWVCRSK--------SDILAQQVIHSGNVVLCGFR--NGA 319 (513)
Q Consensus 261 ~~~~s~~g~~l~s~s-----------~~~i~vwd~~~~~~~~~~~~~--------~~V~~l~~~~~~~~l~sg~~--dg~ 319 (513)
.+.++||++++.++. ++.|.+||+.+++.+..+... .....++|+|||++++++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999887664 356999999999988887643 34678999999999888865 467
Q ss_pred EEE--EECCCCccccccc----ccccc---------CcCeEEEeeCC-----------------------------e-EE
Q 037288 320 IVT--VDVRKRQRGCSSR----AGRRH---------RIPYSRLQRND-----------------------------R-VT 354 (513)
Q Consensus 320 i~i--wd~~~~~~~~~~~----~~~~h---------~~~v~~v~~~~-----------------------------~-~~ 354 (513)
|.+ +|+.+-+.+. +. ....+ .+.+..++... . ++
T Consensus 149 v~V~~iD~~tv~~i~-v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~ 227 (368)
T 1mda_H 149 AGLSVPGASDDQLTK-SASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVW 227 (368)
T ss_dssp EEEEETTTEEEEEEE-CSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEE
T ss_pred EEEEEEchhhceEEE-CCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEE
Confidence 888 8886511110 00 00000 00111111100 0 00
Q ss_pred Ee--E---eecccCcccceeEee-----------cCCCceEEEEEcCCCCEEEEEec-C--------CeEEEEecCCCCc
Q 037288 355 NE--Q---WFELKANIWPSHTTF-----------MPSSISCLQSLQLYDQYFLASSM-D--------GTVKLYDHRLTTR 409 (513)
Q Consensus 355 s~--~---w~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~l~s~s~-d--------g~i~lwd~~~~~~ 409 (513)
.. . .|...........+. .+..... ..++++++.+.++.. + +.+.++|+. ..
T Consensus 228 vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~-v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~--t~ 304 (368)
T 1mda_H 228 AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQM-VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS--VG 304 (368)
T ss_dssp CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSC-EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS--SC
T ss_pred EcCCEEEEEECCCCcceEEEEEEeccccccccccccCccee-eEEcCCCCEEEEEeccccCcccccCCCEEEEECC--CC
Confidence 00 0 000000000000000 0011111 358889888876643 2 356799997 44
Q ss_pred cceEEecCCCCceeEEEEEEcCCCC-EEEEEe-CCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcC
Q 037288 410 GAVQSYEGHVNSHTRIQLGVDQSER-FVMSGG-EDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRT 473 (513)
Q Consensus 410 ~~~~~~~~h~~~v~~~~~~~s~~g~-~l~sg~-~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p 473 (513)
+.+.++..... ...+.|+|||+ .+++.. .++.|.++|+.+++.+.++..... ...+++.+
T Consensus 305 ~vv~~i~vg~~---p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 305 QTSGPISNGHD---SDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp CEEECCEEEEE---ECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred eEEEEEECCCC---cceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 45665543322 23489999998 456666 599999999999999999876443 45666654
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.40 E-value=4.7e-05 Score=81.33 Aligned_cols=158 Identities=17% Similarity=0.112 Sum_probs=97.1
Q ss_pred ccCcEEEEEEcCCCCEEEEE-eC----CeEEEEECCCC--cEEEEeeeCCCeEEEEEecCCc-EEEEEeCC---CeEEEE
Q 037288 255 FKCTVWTADFCTNPSQAVIG-TN----LGAAMVDMETG--MASWVCRSKSDILAQQVIHSGN-VVLCGFRN---GAIVTV 323 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~s~-s~----~~i~vwd~~~~--~~~~~~~~~~~V~~l~~~~~~~-~l~sg~~d---g~i~iw 323 (513)
|...+..+.|+|||++|+.. +. ..|.++|+.++ ....+..+....... |+++|. +++....+ +.|..+
T Consensus 232 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~ 310 (693)
T 3iuj_A 232 QHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTV 310 (693)
T ss_dssp GCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence 44567889999999988643 21 35899999876 444444455555555 566664 55555443 689999
Q ss_pred ECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCC---eEE
Q 037288 324 DVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDG---TVK 400 (513)
Q Consensus 324 d~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg---~i~ 400 (513)
|+.++.... .+.+..|.. .+. .++++++.|+....++ .|+
T Consensus 311 d~~~~~~~~-~~~l~~~~~---------------------------------~~~---~~s~~g~~lv~~~~~~g~~~l~ 353 (693)
T 3iuj_A 311 DAANPGPAH-WRDLIPERQ---------------------------------QVL---TVHSGSGYLFAEYMVDATARVE 353 (693)
T ss_dssp ETTSCCGGG-CEEEECCCS---------------------------------SCE---EEEEETTEEEEEEEETTEEEEE
T ss_pred eCCCCCccc-cEEEecCCC---------------------------------CEE---EEEEECCEEEEEEEECCeeEEE
Confidence 998765321 122222221 121 4566788777666544 688
Q ss_pred EEecCCCCccceEEecC-CCCceeEEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeE
Q 037288 401 LYDHRLTTRGAVQSYEG-HVNSHTRIQLGVDQSERFVMSGGED----CKLRIWSIRSGEL 455 (513)
Q Consensus 401 lwd~~~~~~~~~~~~~~-h~~~v~~~~~~~s~~g~~l~sg~~D----g~v~vwd~~~~~~ 455 (513)
+||+. .+....+.. +...+.. +.++++++.|+....+ ++|+.||+.+++.
T Consensus 354 ~~d~~---g~~~~~l~~p~~~~~~~--~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 354 QFDYE---GKRVREVALPGLGSVSG--FNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EECTT---SCEEEEECCSSSSEEEE--CCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEECC---CCeeEEeecCCCceEEe--eecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 88874 334444432 2333333 6677888766655444 7899999988764
No 224
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.37 E-value=0.0001 Score=72.25 Aligned_cols=188 Identities=9% Similarity=-0.028 Sum_probs=112.5
Q ss_pred EEEEEEcCCCCEEEEEe---CCeEEEEECCCCcEEEE-eeeCCCeEEEEEecCC-cEEEEEeCCCeEEEEECCCCccccc
Q 037288 259 VWTADFCTNPSQAVIGT---NLGAAMVDMETGMASWV-CRSKSDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGCS 333 (513)
Q Consensus 259 V~~~~~s~~g~~l~s~s---~~~i~vwd~~~~~~~~~-~~~~~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~ 333 (513)
-..++|+|||++|+++. ++.|.++| .+++.+.. +..... +.+.|++ ..+++.+.||.+.++|. +++....
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~ 201 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGA 201 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEE
Confidence 45899999999988764 35699999 99988776 654332 4455665 55666778999999998 5543310
Q ss_pred cc---------ccccc---------------CcCeEEEeeCC--eEEEeEeecccCcccceeEeecCCCceEEEEEcCCC
Q 037288 334 SR---------AGRRH---------------RIPYSRLQRND--RVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYD 387 (513)
Q Consensus 334 ~~---------~~~~h---------------~~~v~~v~~~~--~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 387 (513)
.. .+..+ ...+..++... ..+...|+....... .....+.... ...+++++
T Consensus 202 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~--~~~~~p~g~~-~~~~s~d~ 278 (373)
T 2mad_H 202 GLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK--ADTWRPGGWQ-QVAYLKSS 278 (373)
T ss_pred EeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccc--ccceecCceE-eEEECCCC
Confidence 00 00001 11223332211 000111222111100 0011122222 24678888
Q ss_pred CEEEEEec----------CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCC-EEEEEe-CCCcEEEEeCCCCeE
Q 037288 388 QYFLASSM----------DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSER-FVMSGG-EDCKLRIWSIRSGEL 455 (513)
Q Consensus 388 ~~l~s~s~----------dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~-~l~sg~-~Dg~v~vwd~~~~~~ 455 (513)
+.+.++.. ++.|.++|+. ..+.+.++..... . ..+.|+|||+ .++++. .++.|.++|+.+++.
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~~--t~~vv~~i~~g~~-p--~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTGL--VGQTSSQISLGHD-V--DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEECC--CCEEEEEEECCCC-c--CeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 88777653 3579999996 4456677753322 2 3389999999 777777 489999999999999
Q ss_pred EEEe
Q 037288 456 VFED 459 (513)
Q Consensus 456 ~~~~ 459 (513)
+..+
T Consensus 354 v~~i 357 (373)
T 2mad_H 354 DQST 357 (373)
T ss_pred Eeee
Confidence 9884
No 225
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.33 E-value=8.9e-05 Score=67.70 Aligned_cols=184 Identities=10% Similarity=0.012 Sum_probs=115.0
Q ss_pred cccCc--EEEEEEcCCCCEEEEE-eCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCc-EEEEEeCCCeEEEEECCCCc
Q 037288 254 SFKCT--VWTADFCTNPSQAVIG-TNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGN-VVLCGFRNGAIVTVDVRKRQ 329 (513)
Q Consensus 254 ~h~~~--V~~~~~s~~g~~l~s~-s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~ 329 (513)
.|... ...+.|+. +.++.+. .++.|+++|+.+++.+... -....+.....+++. +....-.++.+.+||..+.+
T Consensus 50 phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 50 PHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred cCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 45443 46788873 4444444 4456999999999876666 555555533344554 44444568999999999887
Q ss_pred cccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCc
Q 037288 330 RGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTR 409 (513)
Q Consensus 330 ~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~ 409 (513)
... ++. ...... .+.++++.|+.+..++.|.++|.. ..
T Consensus 128 ~~~---ti~----------------------------------~~~eGw---GLt~Dg~~L~vSdGs~~l~~iDp~--T~ 165 (268)
T 3nok_A 128 RER---TTR----------------------------------YSGEGW---GLCYWNGKLVRSDGGTMLTFHEPD--GF 165 (268)
T ss_dssp EEE---EEE----------------------------------CSSCCC---CEEEETTEEEEECSSSEEEEECTT--TC
T ss_pred EEE---EEe----------------------------------CCCcee---EEecCCCEEEEECCCCEEEEEcCC--CC
Confidence 533 111 111111 122467778777778999999986 44
Q ss_pred cceEEecC--CCCceeE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCC-------------CCCeEEEEEcC
Q 037288 410 GAVQSYEG--HVNSHTR-IQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFS-------------NSVPSAVCWRT 473 (513)
Q Consensus 410 ~~~~~~~~--h~~~v~~-~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~-------------~~~v~~v~~~p 473 (513)
..+.++.. +...+.. -.+.+. +|+..+..-.+..|.+-|..+++.+..+... ....+++||+|
T Consensus 166 ~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 166 ALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred eEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 45555442 2222211 114444 6754444446889999999999999886432 24679999999
Q ss_pred C-CceEEeeC
Q 037288 474 Q-RSMGPQIE 482 (513)
Q Consensus 474 ~-~~~~~t~~ 482 (513)
+ ..+|+|.-
T Consensus 245 ~~~rlfVTGK 254 (268)
T 3nok_A 245 GSGRIFMTGK 254 (268)
T ss_dssp TTCCEEEEET
T ss_pred CCCEEEEeCC
Confidence 8 67777653
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.27 E-value=5.1e-05 Score=74.73 Aligned_cols=187 Identities=12% Similarity=-0.016 Sum_probs=115.3
Q ss_pred cEEEEEEcCCCCEEEEE-eC------CeEEEEECCCCcEEEEeeeC-CC---eEEEEEecCCcEEEEEe-----------
Q 037288 258 TVWTADFCTNPSQAVIG-TN------LGAAMVDMETGMASWVCRSK-SD---ILAQQVIHSGNVVLCGF----------- 315 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~-s~------~~i~vwd~~~~~~~~~~~~~-~~---V~~l~~~~~~~~l~sg~----------- 315 (513)
.-..+...|+| +++++ ++ +++.++|..+++.+...... .. -..+.|+|+++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccccc
Confidence 34567788999 55544 33 56999999999988877622 21 34578899999888884
Q ss_pred --------CCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEE-EEcCC
Q 037288 316 --------RNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQ-SLQLY 386 (513)
Q Consensus 316 --------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~-~~~~~ 386 (513)
.+.+|.+||+.+++... ++.--.. ......+. .++|+
T Consensus 218 ~~~~~~~~~~d~V~v~D~~~~k~~~---tI~vg~~-------------------------------g~~P~~i~f~~~Pd 263 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLRKRKRIH---SLTLGEE-------------------------------NRMALELRPLHDPT 263 (462)
T ss_dssp CTTTHHHHSCCEEEEEETTTTEEEE---EEESCTT-------------------------------EEEEEEEEECSSTT
T ss_pred chhhhhhccCCEEEEEECCCCcEee---EEecCCC-------------------------------CCccceeEeeECCC
Confidence 37899999998765322 1111000 00011111 35888
Q ss_pred CCEEEEEe------cCCeEEEEecCCCCccceEEe--cCC----------------CCceeEEEEEEcCCCCEEEEEeC-
Q 037288 387 DQYFLASS------MDGTVKLYDHRLTTRGAVQSY--EGH----------------VNSHTRIQLGVDQSERFVMSGGE- 441 (513)
Q Consensus 387 ~~~l~s~s------~dg~i~lwd~~~~~~~~~~~~--~~h----------------~~~v~~~~~~~s~~g~~l~sg~~- 441 (513)
++++.+++ .+++|.+|..........+.+ ... .+.. ..+.+++||++|+++..
T Consensus 264 g~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p--a~I~lS~DGrfLYVSnrg 341 (462)
T 2ece_A 264 KLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV--TDIDISLDDKFLYLSLWG 341 (462)
T ss_dssp CCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC--CCEEECTTSCEEEEEETT
T ss_pred CCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce--eEEEECCCCCEEEEEeCC
Confidence 88877766 456787765531111112211 100 1122 33788999999988776
Q ss_pred CCcEEEEeCCC---CeEEEEecCCCC--------------CeEEEEEcCCC-ceEEee
Q 037288 442 DCKLRIWSIRS---GELVFEDKFSNS--------------VPSAVCWRTQR-SMGPQI 481 (513)
Q Consensus 442 Dg~v~vwd~~~---~~~~~~~~~~~~--------------~v~~v~~~p~~-~~~~t~ 481 (513)
.+.|.+||+.. .+++..+...+. ....++++|++ .++++.
T Consensus 342 ~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 342 IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 68999999863 456666543211 36889999996 455555
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.25 E-value=9.8e-05 Score=78.57 Aligned_cols=207 Identities=12% Similarity=0.140 Sum_probs=114.7
Q ss_pred EEEEcCCCCEEEEEeCC--------------------eEEEEECCCCcEEEEeeeC----------CCeEEEEEecCCc-
Q 037288 261 TADFCTNPSQAVIGTNL--------------------GAAMVDMETGMASWVCRSK----------SDILAQQVIHSGN- 309 (513)
Q Consensus 261 ~~~~s~~g~~l~s~s~~--------------------~i~vwd~~~~~~~~~~~~~----------~~V~~l~~~~~~~- 309 (513)
.+++.+++.++..+..+ .|..+|..+|+.++.++.. ..+.......+|.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 57888888877777543 3899999999999987621 1222223334665
Q ss_pred --EEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCC--eEEEeE--eecccCcccceeEeecCC----CceE
Q 037288 310 --VVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND--RVTNEQ--WFELKANIWPSHTTFMPS----SISC 379 (513)
Q Consensus 310 --~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~s~~--w~~~~~~~~~~~~~~~~~----~v~~ 379 (513)
.|+.++.+|.++++|.++++... -..+.. ......++... -+.... |....++ ..+..+. ..-.
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~-~~~~~~-~~w~~~~~~~~~~pi~~~~~~~~~~~~~----~~~~~p~~~Gg~~w~ 392 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLS-AKGIVP-QSWTKGMDMKTGRPILDEENAAYWKNGK----RNLVTPAFWGAHDWQ 392 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEE-EEESSC-CSSEEEEETTTTEEEECHHHHCTTTSSS----CEEESSCTTCSSCSS
T ss_pred EEEEEEECCCCeEEEEECCCCCEec-cccccc-cccccccCccCCCcccchhhccccCCCC----eeEeCCCcccccCCC
Confidence 78999999999999999987642 011110 01111111000 000000 0000000 0000000 0000
Q ss_pred EEEEcCCCCEEEEEec---------------------------------------------CCeEEEEecCCCCccceEE
Q 037288 380 LQSLQLYDQYFLASSM---------------------------------------------DGTVKLYDHRLTTRGAVQS 414 (513)
Q Consensus 380 ~~~~~~~~~~l~s~s~---------------------------------------------dg~i~lwd~~~~~~~~~~~ 414 (513)
-.+++|+..++++... +|.|..||+. ..+.+-.
T Consensus 393 ~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~--tG~~~W~ 470 (689)
T 1yiq_A 393 PMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV--KQQAAWE 470 (689)
T ss_dssp CCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT--TTEEEEE
T ss_pred cceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC--CCCeEeE
Confidence 0245555555554422 4789999986 3444545
Q ss_pred ecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCC-eEEEEEcCCCceE
Q 037288 415 YEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSV-PSAVCWRTQRSMG 478 (513)
Q Consensus 415 ~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~-v~~v~~~p~~~~~ 478 (513)
+..+... .. -.+...+.+++.|+.||.|+.||.++|+++..++...+. ..-+.|..++..+
T Consensus 471 ~~~~~~~-~~--g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 471 VPYVTIF-NG--GTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQY 532 (689)
T ss_dssp EEESSSC-CC--CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred ccCCCCc-cC--ccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEE
Confidence 5433322 11 233456889999999999999999999999988654332 2446676675433
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.17 E-value=4.7e-05 Score=73.77 Aligned_cols=192 Identities=7% Similarity=-0.063 Sum_probs=108.6
Q ss_pred CcEEEEEEcCCCCEEEEEe---CCeEEEEECCCCcEEEEe-------eeCCCeEEEEEecCCcEEEEEeC-----CCeEE
Q 037288 257 CTVWTADFCTNPSQAVIGT---NLGAAMVDMETGMASWVC-------RSKSDILAQQVIHSGNVVLCGFR-----NGAIV 321 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s---~~~i~vwd~~~~~~~~~~-------~~~~~V~~l~~~~~~~~l~sg~~-----dg~i~ 321 (513)
..+..++++++|+++++.. ++.++||.+.+++....- .+-..+..++++++++++++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 6789999999999988853 232455655455433110 12346899999999987766544 58999
Q ss_pred EEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCC-CCEEEEEe---cCC
Q 037288 322 TVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLY-DQYFLASS---MDG 397 (513)
Q Consensus 322 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~s---~dg 397 (513)
+||+.+++... .+.-... .......... +.++++ +..+++.. .++
T Consensus 97 ~~d~~tg~~~~---~~~~~~~---------------------------~~~~~~~~~~-v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 97 AWDTLNNQLSR---VIYLPPP---------------------------ITLSNSFVND-LAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp EEETTTTEEEE---EEECCTT---------------------------TSCTTCCCCE-EEEETTTTEEEEEECCSGGGC
T ss_pred EEECCCCeEEE---EEECChh---------------------------hcccccccce-EEEecCCCEEEEEcCccCCCC
Confidence 99998776322 1110000 0000111223 345554 44445554 678
Q ss_pred eEEEEecCCCCccceEEecCCCCc---------------------------eeEEEEEEcCCCCEEEEEeCCC-cEEEEe
Q 037288 398 TVKLYDHRLTTRGAVQSYEGHVNS---------------------------HTRIQLGVDQSERFVMSGGEDC-KLRIWS 449 (513)
Q Consensus 398 ~i~lwd~~~~~~~~~~~~~~h~~~---------------------------v~~~~~~~s~~g~~l~sg~~Dg-~v~vwd 449 (513)
.|.+||+. .......+.+|... .....++++|+|+.|+.+..++ .|+.++
T Consensus 146 ~i~v~d~~--~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 146 ALIRVDLQ--TGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp EEEEEETT--TCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred eEEEEECC--CCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 99999985 33333334332100 1123488999999998887766 444444
Q ss_pred CC---CCe--------EEEEecCCCCCeEEEEEcCCCceEEeeC
Q 037288 450 IR---SGE--------LVFEDKFSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 450 ~~---~~~--------~~~~~~~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
.. .+. .+..+ .+......+++++++.++++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~ 266 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDL 266 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEG
T ss_pred HHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEcc
Confidence 21 111 00111 1223456788888877766654
No 229
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.10 E-value=0.00012 Score=71.41 Aligned_cols=156 Identities=10% Similarity=-0.043 Sum_probs=99.8
Q ss_pred EEcCCCCEEEEEe------CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEe----------CCCeEEEEECC
Q 037288 263 DFCTNPSQAVIGT------NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGF----------RNGAIVTVDVR 326 (513)
Q Consensus 263 ~~s~~g~~l~s~s------~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~----------~dg~i~iwd~~ 326 (513)
...|++..+.+.. ++.|.+.|..+++.+..+.....-. ++++|||+.++++. .++.|.+||..
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 3357887666553 3569999999999888887444344 99999998887765 46789999999
Q ss_pred CCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEec--CCeEEEEec
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM--DGTVKLYDH 404 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~--dg~i~lwd~ 404 (513)
+.+... .+.-..+ ........... ..++|+|++++++.. ++.|.++|+
T Consensus 118 t~~v~~---~I~v~~g--------------------------~r~~~g~~P~~-~a~spDGk~lyVan~~~~~~VsVID~ 167 (386)
T 3sjl_D 118 TLLPTA---DIELPDA--------------------------PRFLVGTYPWM-TSLTPDGKTLLFYQFSPAPAVGVVDL 167 (386)
T ss_dssp TCCEEE---EEEETTC--------------------------CCCCBSCCGGG-EEECTTSSEEEEEECSSSCEEEEEET
T ss_pred CCeEEE---EEECCCc--------------------------cccccCCCCce-EEEcCCCCEEEEEEcCCCCeEEEEEC
Confidence 877533 1110000 00000001111 478899999988874 689999999
Q ss_pred CCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CeEE
Q 037288 405 RLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRS-GELV 456 (513)
Q Consensus 405 ~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~-~~~~ 456 (513)
. ....+.++.... . ...+....+.+++.+.||.+.+.++.+ ++..
T Consensus 168 ~--t~~vv~tI~v~g-~----~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~ 213 (386)
T 3sjl_D 168 E--GKAFKRMLDVPD-C----YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPE 213 (386)
T ss_dssp T--TTEEEEEEECCS-E----EEEEEEETTEEEEEETTSCEEEEECCSSSCCE
T ss_pred C--CCcEEEEEECCC-c----ceeecCCCceeEEECCCCCEEEEECCCCCeEE
Confidence 7 555666664321 1 122222345667778888888888876 5543
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.08 E-value=0.00021 Score=75.80 Aligned_cols=207 Identities=15% Similarity=0.145 Sum_probs=115.9
Q ss_pred EEEEEcCCCCEEEEEeCC--------------------eEEEEECCCCcEEEEeeeC----------CCeEEEEEecCC-
Q 037288 260 WTADFCTNPSQAVIGTNL--------------------GAAMVDMETGMASWVCRSK----------SDILAQQVIHSG- 308 (513)
Q Consensus 260 ~~~~~s~~g~~l~s~s~~--------------------~i~vwd~~~~~~~~~~~~~----------~~V~~l~~~~~~- 308 (513)
..+++++++..+..+..+ .|..+|..+|+.++.++.. .....+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 357788888877766432 4899999999999887621 122333444578
Q ss_pred --cEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCC----CceEEEE
Q 037288 309 --NVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPS----SISCLQS 382 (513)
Q Consensus 309 --~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~----~v~~~~~ 382 (513)
..|+.++.+|.++++|..+++..... .+.. ......++-.-+.+. . .............+. ..-...+
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~-~~~~-~~~~~~~d~~g~~~~---~-~~~~~~~~~~~~~P~~~G~~~w~~~a 399 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAK-NFVP-VNWASGYDKHGKPIG---I-AAARDGSKPQDAVPGPYGAHNWHPMS 399 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEE-ESSC-CSSEEEECTTSCEEE---C-GGGGCTTSCEECSSCTTCSSCSSCCE
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccc-cccc-cCcccccCCCCceee---c-cccCcCCCccEECcCcccccCCCCce
Confidence 68999999999999999998764311 1100 011111110000000 0 000000000000000 0000135
Q ss_pred EcCCCCEEEEEec-------------------------------------------CCeEEEEecCCCCccceEEecCCC
Q 037288 383 LQLYDQYFLASSM-------------------------------------------DGTVKLYDHRLTTRGAVQSYEGHV 419 (513)
Q Consensus 383 ~~~~~~~l~s~s~-------------------------------------------dg~i~lwd~~~~~~~~~~~~~~h~ 419 (513)
++|+..++++... .|.|..||+. ..+.+-.+.. .
T Consensus 400 ~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~--tG~~~W~~~~-~ 476 (677)
T 1kb0_A 400 FNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPV--AQKAAWSVEH-V 476 (677)
T ss_dssp EETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETT--TTEEEEEEEE-S
T ss_pred EcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCC--CCcEEeecCC-C
Confidence 5666666665543 2789999986 3334444432 2
Q ss_pred CceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCC-CeEEEEEcCCCce
Q 037288 420 NSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNS-VPSAVCWRTQRSM 477 (513)
Q Consensus 420 ~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~-~v~~v~~~p~~~~ 477 (513)
..... ..+..++..++.++.||.+++||..+++++..+..... ...-+.|..++..
T Consensus 477 ~~~~~--g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~ 533 (677)
T 1kb0_A 477 SPWNG--GTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQ 533 (677)
T ss_dssp SSCCC--CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCCcC--cceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEE
Confidence 22222 23445688899999999999999999999999865432 2334566666543
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.01 E-value=0.0001 Score=75.20 Aligned_cols=212 Identities=9% Similarity=-0.015 Sum_probs=125.3
Q ss_pred cEEEEEE-c-CCCCEEEEEe-------------------CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeC
Q 037288 258 TVWTADF-C-TNPSQAVIGT-------------------NLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFR 316 (513)
Q Consensus 258 ~V~~~~~-s-~~g~~l~s~s-------------------~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~ 316 (513)
....+++ + |++.++.+++ ++.+.++|.++.+..+.+.-...-..++++|+|+++++.+.
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~ 214 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSY 214 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEES
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEec
Confidence 4667777 4 8888887774 12488999999998888775446677889999999999987
Q ss_pred CC---------------eEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccc-eeEeecCCCceEE
Q 037288 317 NG---------------AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWP-SHTTFMPSSISCL 380 (513)
Q Consensus 317 dg---------------~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~-~~~~~~~~~v~~~ 380 (513)
+. .|.+.|............... -..|.-|+ ..+..... ...+.......+
T Consensus 215 ~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~-i~~V~VID-----------~~~~~~~~~~~~Ipvg~~PhG- 281 (595)
T 1fwx_A 215 NSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE-LNGVKVVD-----------GRKEASSLFTRYIPIANNPHG- 281 (595)
T ss_dssp CTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE-ETTEEEEE-----------CSGGGCCSSEEEEEEESSCCC-
T ss_pred CcccCcchhhccccccceEEEeeccceeEeccCCCeeE-ECcEEEEe-----------CcccCCceeEEEEecCCCceE-
Confidence 63 356666432211000000000 01122222 12100011 223333333334
Q ss_pred EEEcCCCCEEEEEe-cCCeEEEEecCCCC---------c-cceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 037288 381 QSLQLYDQYFLASS-MDGTVKLYDHRLTT---------R-GAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWS 449 (513)
Q Consensus 381 ~~~~~~~~~l~s~s-~dg~i~lwd~~~~~---------~-~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd 449 (513)
+.++|||+++++++ .+.+|.++|+...+ . ..+.......++ +.++|+|+|...++...|+.|.+||
T Consensus 282 v~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP---~h~aF~~dG~aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 282 CNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP---LHTAFDGRGNAYTSLFLDSQVVKWN 358 (595)
T ss_dssp EEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE---EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc---ceEEECCCCeEEEEEecCCcEEEEE
Confidence 47899999888776 48899999997211 0 022233322332 4589999994444566799999999
Q ss_pred CCC----------CeEEEEecCCCCCe-----EEEEEcCCCceEEeeCCCe
Q 037288 450 IRS----------GELVFEDKFSNSVP-----SAVCWRTQRSMGPQIEGKI 485 (513)
Q Consensus 450 ~~~----------~~~~~~~~~~~~~v-----~~v~~~p~~~~~~t~~~~~ 485 (513)
+.+ .+.+..+..|-.+- .++..+|++.+|.+....-
T Consensus 359 i~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 359 IEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp HHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred hhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCC
Confidence 987 66777777665432 1224468866555554433
No 232
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.00 E-value=0.00055 Score=67.83 Aligned_cols=192 Identities=10% Similarity=0.057 Sum_probs=106.3
Q ss_pred EEEEEEcCCCCEEEEEe---CCeEEEEECCCCcEEEEeeeCCCeEEEEEecCC-cEEEEEeCCCeEEEEECCCCcccccc
Q 037288 259 VWTADFCTNPSQAVIGT---NLGAAMVDMETGMASWVCRSKSDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGCSS 334 (513)
Q Consensus 259 V~~~~~s~~g~~l~s~s---~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~ 334 (513)
-..+.|+|||+++.++. ++.|.+.|+.+++.+..+.-... ....|++ ..+++.+.||.+.+.|+..++.....
T Consensus 179 P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~ 255 (426)
T 3c75_H 179 QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTN 255 (426)
T ss_dssp GGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEE
T ss_pred cceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEe
Confidence 34679999999888764 35699999999998877764332 2233433 45555566777666666333221000
Q ss_pred -ccccccCcCeE-EEeeCC---eEEEeE-------eecccCcccceeEe-----------ecCCCceEEEEEcCCCCEEE
Q 037288 335 -RAGRRHRIPYS-RLQRND---RVTNEQ-------WFELKANIWPSHTT-----------FMPSSISCLQSLQLYDQYFL 391 (513)
Q Consensus 335 -~~~~~h~~~v~-~v~~~~---~~~s~~-------w~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~~l~ 391 (513)
..+.....++. .+.+.+ .++... .+...........+ ..+..... ..++++++.+.
T Consensus 256 ~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~-va~s~dg~rly 334 (426)
T 3c75_H 256 TEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQ-TAYHRQSDRIY 334 (426)
T ss_dssp CCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSC-EEEEGGGTEEE
T ss_pred eeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCcee-eEEcCCCCEEE
Confidence 00000000100 011111 000000 11111100000000 01111111 36788888776
Q ss_pred EEec----------CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCC-EEEEEe-CCCcEEEEeCCCCeEEEEe
Q 037288 392 ASSM----------DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSER-FVMSGG-EDCKLRIWSIRSGELVFED 459 (513)
Q Consensus 392 s~s~----------dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~-~l~sg~-~Dg~v~vwd~~~~~~~~~~ 459 (513)
+... ++.|.++|+. ..+.+.++..... ...+.|+|||+ ++++.. .++.|.++|+.+++.+.++
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~--T~kvv~~I~vg~~---P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAE--TGERINKIELGHE---IDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETT--TCCEEEEEEEEEE---ECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEecccccccccCCCCEEEEEECC--CCeEEEEEECCCC---cCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 6542 3579999997 5556776653221 23489999999 888888 4999999999999999887
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.00 E-value=0.0042 Score=61.20 Aligned_cols=182 Identities=10% Similarity=0.051 Sum_probs=111.8
Q ss_pred CCCCEEEEEe--CCeEEEEECCCC----cEEEEee-------eC-CCeEEEEEecCCcEEEEEeCC------CeEEEEEC
Q 037288 266 TNPSQAVIGT--NLGAAMVDMETG----MASWVCR-------SK-SDILAQQVIHSGNVVLCGFRN------GAIVTVDV 325 (513)
Q Consensus 266 ~~g~~l~s~s--~~~i~vwd~~~~----~~~~~~~-------~~-~~V~~l~~~~~~~~l~sg~~d------g~i~iwd~ 325 (513)
.++++|...+ ++.|.++|+.+. +...++. .. ..-..+...|+| +++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7888877654 456999999765 4555552 11 134566778999 66666555 78999999
Q ss_pred CCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe-----------
Q 037288 326 RKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS----------- 394 (513)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s----------- 394 (513)
.+.+... ++.....+ ...---.+++|+++.++++.
T Consensus 172 ~T~~v~~---~~~~~~~~-------------------------------~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 172 YSFEPLG---KWEIDRGD-------------------------------QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp TTCCEEE---ECCSBCTT-------------------------------CCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred CCCeEEE---EEccCCCC-------------------------------ccccceEEECCCCCEEEEccCcCcccccccc
Confidence 8877533 22111000 00000147889999888874
Q ss_pred --------cCCeEEEEecCCCCccceEEecCCCC--ceeEEEEEEcCCCCEEEEEe------CCCcEEEEeCCCCeEE--
Q 037288 395 --------MDGTVKLYDHRLTTRGAVQSYEGHVN--SHTRIQLGVDQSERFVMSGG------EDCKLRIWSIRSGELV-- 456 (513)
Q Consensus 395 --------~dg~i~lwd~~~~~~~~~~~~~~h~~--~v~~~~~~~s~~g~~l~sg~------~Dg~v~vwd~~~~~~~-- 456 (513)
.+..|.+||+. ....++++..... ....+.++|+|++++++.++ .+++|.+|....++..
T Consensus 218 ~~~~~~~~~~d~V~v~D~~--~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~ 295 (462)
T 2ece_A 218 KLEHLKDRYGNRIHFWDLR--KRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAE 295 (462)
T ss_dssp CTTTHHHHSCCEEEEEETT--TTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEE
T ss_pred chhhhhhccCCEEEEEECC--CCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEE
Confidence 36899999997 4446666654311 11223345599999988877 4668888776655321
Q ss_pred EEe--cCC----------------CCCeEEEEEcCCC-ceEEeeCCC
Q 037288 457 FED--KFS----------------NSVPSAVCWRTQR-SMGPQIEGK 484 (513)
Q Consensus 457 ~~~--~~~----------------~~~v~~v~~~p~~-~~~~t~~~~ 484 (513)
..+ ... ...+..+.++|++ .++++..+.
T Consensus 296 ~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~ 342 (462)
T 2ece_A 296 KVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI 342 (462)
T ss_dssp EEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT
T ss_pred EEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC
Confidence 111 110 2347889999995 455555443
No 234
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.99 E-value=0.0089 Score=54.61 Aligned_cols=204 Identities=10% Similarity=0.062 Sum_probs=124.8
Q ss_pred EeccccCcEEEEEEcCCCCEEEEEe--CCeEEEEECCCCcEEEEee--eCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 251 LVASFKCTVWTADFCTNPSQAVIGT--NLGAAMVDMETGMASWVCR--SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 251 ~~~~h~~~V~~~~~s~~g~~l~s~s--~~~i~vwd~~~~~~~~~~~--~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
.+.+-...+..++++|++..|.+.. ++.|...|.. ++.+..+. .....-.|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3556667899999999876555443 3448888998 87777664 33568899999888877777678899999887
Q ss_pred CCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCC
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRL 406 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~ 406 (513)
.......+... .+ +............ +++++.++.|.++.......+|.+.-
T Consensus 100 ~~~~i~~~~~~----------~~-----------------~~~~~~~N~g~EG-LA~d~~~~~L~va~E~~p~~i~~~~g 151 (255)
T 3qqz_A 100 PNSEVKILKKI----------KI-----------------PLQESPTNCGFEG-LAYSRQDHTFWFFKEKNPIEVYKVNG 151 (255)
T ss_dssp TTCCEEEEEEE----------EC-----------------CCSSCCCSSCCEE-EEEETTTTEEEEEEESSSEEEEEEES
T ss_pred CCCeeeeeeee----------cc-----------------ccccccccCCcce-EEEeCCCCEEEEEECcCCceEEEEcc
Confidence 65421100000 00 0000011122333 46777887777776655555555531
Q ss_pred C-CccceEEec-------CCCCceeEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEecCCC---------CCeEE
Q 037288 407 T-TRGAVQSYE-------GHVNSHTRIQLGVDQS-ERFVMSGGEDCKLRIWSIRSGELVFEDKFSN---------SVPSA 468 (513)
Q Consensus 407 ~-~~~~~~~~~-------~h~~~v~~~~~~~s~~-g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~---------~~v~~ 468 (513)
. ....+..+. .+...... ++++|. +.+++.......|.++|.. |+.+..+.-.. .....
T Consensus 152 ~~~~~~l~i~~~~~~~~~~~~~d~S~--l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEG 228 (255)
T 3qqz_A 152 LLSSNELHISKDKALQRQFTLDDVSG--AEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEG 228 (255)
T ss_dssp TTCSSCCEEEECHHHHHTCCSSCCCE--EEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEE
T ss_pred cccCCceeeecchhhccccccCCcee--EEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCe
Confidence 0 111222221 11222334 788886 5556666778889999965 55666643321 24689
Q ss_pred EEEcCCCceEEeeCCCee
Q 037288 469 VCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 469 v~~~p~~~~~~t~~~~~~ 486 (513)
|+|.+++.++++++.+..
T Consensus 229 ia~d~~G~lyIvsE~n~~ 246 (255)
T 3qqz_A 229 VAMDASGNIYIVSEPNRF 246 (255)
T ss_dssp EEECTTCCEEEEETTTEE
T ss_pred eEECCCCCEEEEcCCceE
Confidence 999999999999998754
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.99 E-value=0.00015 Score=69.33 Aligned_cols=178 Identities=8% Similarity=0.051 Sum_probs=106.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeC-CCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccc
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSK-SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSR 335 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~-~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 335 (513)
..+.++...+++.+++...++++..+|.. ++..+..... ..+.++.+.+++.+.+ ++ +.|..+| .+++...
T Consensus 137 ~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~--- 208 (330)
T 3hxj_A 137 AIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKW--- 208 (330)
T ss_dssp CCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEE---
T ss_pred ceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEE---
Confidence 34555666677876665556789999998 8777666533 3467777777777554 44 7888998 5443221
Q ss_pred cccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEe
Q 037288 336 AGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSY 415 (513)
Q Consensus 336 ~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~ 415 (513)
...... ..+.+ ....+++. |.+++.++.|..+|. ....+..+
T Consensus 209 ~~~~~~---------------------------------~~~~~-~~~~~~g~-l~v~t~~~gl~~~~~---~g~~~~~~ 250 (330)
T 3hxj_A 209 NFYAGY---------------------------------WTVTR-PAISEDGT-IYVTSLDGHLYAINP---DGTEKWRF 250 (330)
T ss_dssp EECCSS---------------------------------CCCSC-CEECTTSC-EEEEETTTEEEEECT---TSCEEEEE
T ss_pred EEccCC---------------------------------cceec-eEECCCCe-EEEEcCCCeEEEECC---CCCEeEEe
Confidence 111111 11222 23444554 555777888888874 34444555
Q ss_pred cCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCC
Q 037288 416 EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 416 ~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
......... +.+++++ .|..++.+|.|..+|. +++.+..+......+.++...+++.+++++..+
T Consensus 251 ~~~~~~~~~--~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G 315 (330)
T 3hxj_A 251 KTGKRIESS--PVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNG 315 (330)
T ss_dssp ECSSCCCSC--CEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTS
T ss_pred eCCCCcccc--ceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCC
Confidence 433332223 3445556 4677888889999996 787777766555556666665665444444333
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.96 E-value=0.00042 Score=66.05 Aligned_cols=195 Identities=12% Similarity=0.128 Sum_probs=113.5
Q ss_pred CCCEEEEEeCCeEEEEECCCCcEEEEeeeCC-CeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeE
Q 037288 267 NPSQAVIGTNLGAAMVDMETGMASWVCRSKS-DILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYS 345 (513)
Q Consensus 267 ~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~-~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 345 (513)
++.+.+...++++..+|.. ++..+...... .+.++...+++. |..|+.++.|..+|.. ++... .+.....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~---~~~~~~~--- 177 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKW---RFKTNDA--- 177 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEE---EEECSSC---
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeE---EEecCCC---
Confidence 5555444456779999998 87776665333 356667766776 5567788999999988 54321 1110000
Q ss_pred EEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEE
Q 037288 346 RLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRI 425 (513)
Q Consensus 346 ~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~ 425 (513)
.+.+ ....+++.+++ ++ +.|..+| . ....+..+......+..
T Consensus 178 ------------------------------~~~~-~~~d~~g~l~v-~t--~~l~~~d-~--~g~~~~~~~~~~~~~~~- 219 (330)
T 3hxj_A 178 ------------------------------ITSA-ASIGKDGTIYF-GS--DKVYAIN-P--DGTEKWNFYAGYWTVTR- 219 (330)
T ss_dssp ------------------------------CCSC-CEECTTCCEEE-ES--SSEEEEC-T--TSCEEEEECCSSCCCSC-
T ss_pred ------------------------------ceee-eEEcCCCEEEE-Ee--CEEEEEC-C--CCcEEEEEccCCcceec-
Confidence 1111 23445666444 44 7889999 4 44445555544444544
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCC-Ceee---------eeccCCc-
Q 037288 426 QLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEG-KIHE---------EFDLGQR- 494 (513)
Q Consensus 426 ~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~-~~~~---------~~~~~~~- 494 (513)
+.++++|. |..++.++.|..+| .+++.+..+......+..+...+++.+++++.. .+.. .+.....
T Consensus 220 -~~~~~~g~-l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~ 296 (330)
T 3hxj_A 220 -PAISEDGT-IYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWI 296 (330)
T ss_dssp -CEECTTSC-EEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCC
T ss_pred -eEECCCCe-EEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCCCcEEEEEEcCCcc
Confidence 66677775 56677788899998 466666665554444455666666555544443 4431 1111100
Q ss_pred -------ccceeeeeeccceeeee
Q 037288 495 -------HSWEAWIGTQEGLFRMN 511 (513)
Q Consensus 495 -------~~~~~~~gs~~g~~~~~ 511 (513)
..-..|+|+.+|.+++.
T Consensus 297 ~~~~~~d~~g~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 297 IATPVIDENGTIYFGTRNGKFYAL 320 (330)
T ss_dssp CSCCEECTTCCEEEECTTSCEEEE
T ss_pred ccceEEcCCCEEEEEcCCCeEEEE
Confidence 11247889999988764
No 237
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.94 E-value=0.00028 Score=68.63 Aligned_cols=54 Identities=11% Similarity=-0.139 Sum_probs=44.3
Q ss_pred eEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEe----------CCCeEEEEECCCCcccc
Q 037288 278 GAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGF----------RNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 278 ~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~----------~dg~i~iwd~~~~~~~~ 332 (513)
+|.++|..+++.+..+.....- .+.++||++.++++. .++.|.+||+.+.+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 7889999999988888743333 799999998888886 47899999999987644
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.89 E-value=0.00068 Score=69.17 Aligned_cols=206 Identities=11% Similarity=0.055 Sum_probs=117.3
Q ss_pred CCCCEEEEEe--CCeEEEEECCCCcEEEEee--eCCCeEEEEE-e-cCCcEEEEEe------------------CCCeEE
Q 037288 266 TNPSQAVIGT--NLGAAMVDMETGMASWVCR--SKSDILAQQV-I-HSGNVVLCGF------------------RNGAIV 321 (513)
Q Consensus 266 ~~g~~l~s~s--~~~i~vwd~~~~~~~~~~~--~~~~V~~l~~-~-~~~~~l~sg~------------------~dg~i~ 321 (513)
+||+++.... ++.|.+.|+.+.++..++. .......+++ . |++.++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 4788777664 3459999999999887554 3455888888 4 8999988885 246788
Q ss_pred EEECCCCccccccccccccCcCeEEEeeCC---eEEEeEeecccCcccceeEeecCCCceEEEE--------EcCCCCEE
Q 037288 322 TVDVRKRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQWFELKANIWPSHTTFMPSSISCLQS--------LQLYDQYF 390 (513)
Q Consensus 322 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~~l 390 (513)
++|..+.+... .+.--. ....+++++ .+++.+.+...+........ .....+.. +.++|++.
T Consensus 179 vID~~t~~v~~---qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~---~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 179 AVDADKWEVAW---QVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTA---AEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEETTTTEEEE---EEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTC---CSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred EEECCCCeEEE---EEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccc---cccceEEEeeccceeEeccCCCee
Confidence 88888765432 111100 122333333 33333332222111000000 00000000 12233332
Q ss_pred EEEecCCeEEEEecCCCCccc-eEEecCCCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCe------------EE
Q 037288 391 LASSMDGTVKLYDHRLTTRGA-VQSYEGHVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGE------------LV 456 (513)
Q Consensus 391 ~s~s~dg~i~lwd~~~~~~~~-~~~~~~h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~------------~~ 456 (513)
.. +.|.+.|.+..+... +..+.....+ .+ +.++|||+++++++ .+.+|.++|+.+.+ .+
T Consensus 252 ~i----~~V~VID~~~~~~~~~~~~Ipvg~~P-hG--v~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 252 EL----NGVKVVDGRKEASSLFTRYIPIANNP-HG--CNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp EE----TTEEEEECSGGGCCSSEEEEEEESSC-CC--EEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred EE----CcEEEEeCcccCCceeEEEEecCCCc-eE--EEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence 22 458888887211223 4444322222 23 78999999887665 58899999999663 34
Q ss_pred EEecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 457 FEDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 457 ~~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
..... +.....++|+|++..+++...+-.
T Consensus 325 ~~v~v-G~gP~h~aF~~dG~aY~t~~ldsq 353 (595)
T 1fwx_A 325 AEPEL-GLGPLHTAFDGRGNAYTSLFLDSQ 353 (595)
T ss_dssp ECCBC-CSCEEEEEECTTSEEEEEETTTTE
T ss_pred EEcCC-CCCcceEEECCCCeEEEEEecCCc
Confidence 44433 455889999999977777766644
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.84 E-value=0.018 Score=52.99 Aligned_cols=210 Identities=6% Similarity=-0.045 Sum_probs=119.6
Q ss_pred CcEEEEEEcCCCCEEEEE--eCCeEEEEECCCCcEEEEeeeC-CCeEEEEEecCCc-EEEEEeCCCeEEEEECCCCcccc
Q 037288 257 CTVWTADFCTNPSQAVIG--TNLGAAMVDMETGMASWVCRSK-SDILAQQVIHSGN-VVLCGFRNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~--s~~~i~vwd~~~~~~~~~~~~~-~~V~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~ 332 (513)
..+..+++++++..|..+ .++.|..+++..+......... .....+++++++. ++++-..++.|.++|+.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 457899999976655544 3456999999876544433322 4688999999764 45555567899999987543211
Q ss_pred ccccccccCcCeEEEeeCC---eEEEeEeecccCc-------ccceeEee-cCCCceEEEEEcCCCCEEEE-EecCCeEE
Q 037288 333 SSRAGRRHRIPYSRLQRND---RVTNEQWFELKAN-------IWPSHTTF-MPSSISCLQSLQLYDQYFLA-SSMDGTVK 400 (513)
Q Consensus 333 ~~~~~~~h~~~v~~v~~~~---~~~s~~w~~~~~~-------~~~~~~~~-~~~~v~~~~~~~~~~~~l~s-~s~dg~i~ 400 (513)
+ ..........+++++ .++...+....+. ......+. ..-....-+++++++..|.. -...+.|.
T Consensus 116 -~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 116 -L--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp -E--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred -E--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 1 111123457777776 3333332210000 00111111 11122233477887665554 44568999
Q ss_pred EEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEecCCC-CCeEEEEEcCCCc
Q 037288 401 LYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGELVFEDKFSN-SVPSAVCWRTQRS 476 (513)
Q Consensus 401 lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~~~~~~~~~~-~~v~~v~~~p~~~ 476 (513)
++|+. .......+.+...+ .. ++++ +..|+.+. .++.|..+|..+++.+..+.... ....++++.|+..
T Consensus 193 ~~~~~--g~~~~~~~~~~~~P-~g--i~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 193 CLNPA--QPGRRKVLEGLQYP-FA--VTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEETT--EEEEEEEEECCCSE-EE--EEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEecC--CCceEEEecCCCCc-eE--EEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 99985 22222222322222 23 4544 44555544 56899999999999998876543 2467888888743
No 240
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.84 E-value=0.012 Score=55.62 Aligned_cols=220 Identities=7% Similarity=-0.003 Sum_probs=121.4
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCC-C-eEEEEECCCCccccc
Q 037288 257 CTVWTADFCTNPSQAVIG-TNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRN-G-AIVTVDVRKRQRGCS 333 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~-s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~d-g-~i~iwd~~~~~~~~~ 333 (513)
.....++|+++|+++++. .++.|..||.... .............+++.++|+++++.... + .|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~- 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET- 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE-
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE-
Confidence 457789999999977776 4566999998754 44444445568999999999966655432 2 47777776665322
Q ss_pred cccccccCcCeEEEeeCC--eE-EEeE-----eecccC--cccceeE---e---ecCC---CceEEEEEcCCCCEEEE-E
Q 037288 334 SRAGRRHRIPYSRLQRND--RV-TNEQ-----WFELKA--NIWPSHT---T---FMPS---SISCLQSLQLYDQYFLA-S 393 (513)
Q Consensus 334 ~~~~~~h~~~v~~v~~~~--~~-~s~~-----w~~~~~--~~~~~~~---~---~~~~---~v~~~~~~~~~~~~l~s-~ 393 (513)
+..+.. ......++..+ .+ ++.. |..... ....... . .... ....+ ++++..|.+ -
T Consensus 110 ~~~~~~-~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi---s~dg~~lyv~d 185 (306)
T 2p4o_A 110 LLTLPD-AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL---KRFGNFLYVSN 185 (306)
T ss_dssp EEECTT-CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE---EEETTEEEEEE
T ss_pred EEeCCC-ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc---CcCCCEEEEEe
Confidence 112111 11112222112 22 2211 222211 0000000 0 0001 12222 567765554 4
Q ss_pred ecCCeEEEEecCC-CCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--EecCCCCCeEEEE
Q 037288 394 SMDGTVKLYDHRL-TTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVF--EDKFSNSVPSAVC 470 (513)
Q Consensus 394 s~dg~i~lwd~~~-~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~--~~~~~~~~v~~v~ 470 (513)
...+.|..||+.. ........+... ..... ++++++|++.++....+.|.++|.. ++... .+......+++++
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~g--i~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDD--FAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEES-CCCSS--EEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred CCCCEEEEEEeCCCCCCCccEEEecc-CCCCC--eEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 4578999999852 111112222111 11122 7889999887777778899999975 66533 3333335689999
Q ss_pred Ec---CC-CceEEeeCCCee
Q 037288 471 WR---TQ-RSMGPQIEGKIH 486 (513)
Q Consensus 471 ~~---p~-~~~~~t~~~~~~ 486 (513)
|. |+ ..+++++.....
T Consensus 262 ~~g~~~d~~~LyVt~~~~~~ 281 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVTNGGMF 281 (306)
T ss_dssp ECCSTTTTTEEEEEECTTSS
T ss_pred EecccCCCCEEEEECCCCcc
Confidence 98 77 677777776533
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.83 E-value=0.0011 Score=64.61 Aligned_cols=145 Identities=17% Similarity=0.139 Sum_probs=90.0
Q ss_pred EEEEE-eCCeEEEEECCCCcEEEEeeeCCCe-----E---EEEEec--CCcEEEEEeCCCeEEEEECCCCcccccccccc
Q 037288 270 QAVIG-TNLGAAMVDMETGMASWVCRSKSDI-----L---AQQVIH--SGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGR 338 (513)
Q Consensus 270 ~l~s~-s~~~i~vwd~~~~~~~~~~~~~~~V-----~---~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 338 (513)
.+..+ .++.+..+|..+|+.++......+- . .+.-.| .+..++.++.++.+..+|..+++... ...
T Consensus 190 ~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w---~~~ 266 (376)
T 3q7m_A 190 AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMW---KRE 266 (376)
T ss_dssp EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEE---EEC
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEe---ecc
Confidence 44445 4567999999999988877633210 0 010111 24667778889999999998886432 000
Q ss_pred ccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCC
Q 037288 339 RHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGH 418 (513)
Q Consensus 339 ~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h 418 (513)
....... .. ++..+.+++.++.|..+|.. ....+......
T Consensus 267 -----------------------------------~~~~~~~-~~--~~~~l~~~~~~g~l~~~d~~--tG~~~w~~~~~ 306 (376)
T 3q7m_A 267 -----------------------------------LGSVNDF-IV--DGNRIYLVDQNDRVMALTID--GGVTLWTQSDL 306 (376)
T ss_dssp -----------------------------------CCCEEEE-EE--ETTEEEEEETTCCEEEEETT--TCCEEEEECTT
T ss_pred -----------------------------------CCCCCCc-eE--ECCEEEEEcCCCeEEEEECC--CCcEEEeeccc
Confidence 0011111 12 36677788889999999986 33344444311
Q ss_pred -CCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC
Q 037288 419 -VNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF 461 (513)
Q Consensus 419 -~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~ 461 (513)
...... ..+ .+..|+.++.+|.|+++|..+++.+.....
T Consensus 307 ~~~~~~~--~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 307 LHRLLTS--PVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TTSCCCC--CEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCCcccC--CEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 111111 111 257889999999999999999999887665
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.80 E-value=0.043 Score=59.29 Aligned_cols=221 Identities=12% Similarity=0.054 Sum_probs=132.5
Q ss_pred cCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeee--------CCCeEEEEEecCCcEEEEEeCCCeEEEEECCC
Q 037288 256 KCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRS--------KSDILAQQVIHSGNVVLCGFRNGAIVTVDVRK 327 (513)
Q Consensus 256 ~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~--------~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 327 (513)
...|.++...+++.+.+...++++..||..+++....... ...|.++...++|.+.+ |+.+ -|.+||..+
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~ 291 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGT 291 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTT
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCC
Confidence 4578888888888877666566899999988765443321 24599999888887554 4455 488899876
Q ss_pred Cccccccccc-----cccCcCeEEEeeCC--eEEEeE-------eecccCcccceeEe----e-cCCCceEEEEEcCCCC
Q 037288 328 RQRGCSSRAG-----RRHRIPYSRLQRND--RVTNEQ-------WFELKANIWPSHTT----F-MPSSISCLQSLQLYDQ 388 (513)
Q Consensus 328 ~~~~~~~~~~-----~~h~~~v~~v~~~~--~~~s~~-------w~~~~~~~~~~~~~----~-~~~~v~~~~~~~~~~~ 388 (513)
..... +... .-....|.++...+ .+..|+ ++............ . ....|.++ ...++|+
T Consensus 292 ~~~~~-~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i-~~d~~g~ 369 (795)
T 4a2l_A 292 DSFAS-YSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCI-VEDKDKN 369 (795)
T ss_dssp TEEEE-ECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEE-EECTTSC
T ss_pred CeEEE-EecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEE-EECCCCC
Confidence 64322 1110 11235688887776 444444 33222221100000 0 12235554 4455665
Q ss_pred EEEEEecCCeEEEEecCCCCccceEEecC---------CCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 037288 389 YFLASSMDGTVKLYDHRLTTRGAVQSYEG---------HVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFED 459 (513)
Q Consensus 389 ~l~s~s~dg~i~lwd~~~~~~~~~~~~~~---------h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~ 459 (513)
|-.|+.++-|..||.. .+....+.. ..+.|.. +..+++|+.|..|+.++-|..||..+++...-.
T Consensus 370 -lWiGt~~~Gl~~~~~~---~~~~~~~~~~~~~~~~~l~~~~v~~--i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 370 -LWIGTNDGGLNLYNPI---TQRFTSYTLQEDESARGIGSNNIKA--VYVDEKKSLVYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp -EEEEESSSCEEEECTT---TCCEEEECCC------CCSCSCEEE--EEEETTTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred -EEEEECCCCeEEEcCC---CCcEEEEecCCCCcccCCCCccEEE--EEEcCCCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence 5557878789999974 333333321 1234444 777788885677788778999999888754432
Q ss_pred c----CCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 460 K----FSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 460 ~----~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
. .....|.++...+++.+.++...++.
T Consensus 444 ~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~ 474 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDGEGNLWLGTLSALV 474 (795)
T ss_dssp TTTSCCSCSCEEEEEECSSSCEEEEESSCEE
T ss_pred cCCCCcCCCeeEEEEECCCCCEEEEecCcee
Confidence 2 12456899998888665555545544
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.78 E-value=0.0015 Score=69.34 Aligned_cols=56 Identities=23% Similarity=0.175 Sum_probs=41.9
Q ss_pred CCeEEEEECCCCcEEEEeeeCCC---------------------------------eEEEEEecCCcEEEEEeCCC----
Q 037288 276 NLGAAMVDMETGMASWVCRSKSD---------------------------------ILAQQVIHSGNVVLCGFRNG---- 318 (513)
Q Consensus 276 ~~~i~vwd~~~~~~~~~~~~~~~---------------------------------V~~l~~~~~~~~l~sg~~dg---- 318 (513)
++.|+.+|..+|+.++.+..... ...++++|++.+|+.++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 46699999999999988763211 13578889999999887765
Q ss_pred ---------------eEEEEECCCCccc
Q 037288 319 ---------------AIVTVDVRKRQRG 331 (513)
Q Consensus 319 ---------------~i~iwd~~~~~~~ 331 (513)
.|..+|.++++..
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~ 296 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYK 296 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEE
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEE
Confidence 4888888877654
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.74 E-value=0.0045 Score=58.91 Aligned_cols=182 Identities=12% Similarity=0.068 Sum_probs=107.1
Q ss_pred CcEEEEEEcC-CCCEEEEEeCCeEEEEECCCCcEEEEee-----eCCCeEEEEEec-CCcEEEEEeC-------------
Q 037288 257 CTVWTADFCT-NPSQAVIGTNLGAAMVDMETGMASWVCR-----SKSDILAQQVIH-SGNVVLCGFR------------- 316 (513)
Q Consensus 257 ~~V~~~~~s~-~g~~l~s~s~~~i~vwd~~~~~~~~~~~-----~~~~V~~l~~~~-~~~~l~sg~~------------- 316 (513)
..+..+++.+ +++++++....++..+|..++....+.. .......+++.+ +|++.++-..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 3578899997 7777666566668888887664322221 112367889999 8876665432
Q ss_pred ----CCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEE
Q 037288 317 ----NGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLA 392 (513)
Q Consensus 317 ----dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 392 (513)
++.|..+|..+++... +. ..+. .... ++++++++.|.+
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~----~~------------------------------~~~~---~p~g-ia~~~dg~~lyv 201 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTL----LL------------------------------KELH---VPGG-AEVSADSSFVLV 201 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEE----EE------------------------------EEES---CCCE-EEECTTSSEEEE
T ss_pred ccCCCceEEEEeCCCCEEEE----ec------------------------------cCCc---cCcc-eEECCCCCEEEE
Confidence 3567777765443211 00 0000 1111 467889886655
Q ss_pred E-ecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeC----------CCcEEEEeCCCCeEEEEecC
Q 037288 393 S-SMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE----------DCKLRIWSIRSGELVFEDKF 461 (513)
Q Consensus 393 ~-s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~----------Dg~v~vwd~~~~~~~~~~~~ 461 (513)
+ +.++.|.+||+..........+....+ ... ++++++|++.++... .+.|..+|. .++.+..+..
T Consensus 202 ~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~g--i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~ 277 (322)
T 2fp8_A 202 AEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGN--IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPL 277 (322)
T ss_dssp EEGGGTEEEEEESSSTTTTCEEEEEECSS-EEE--EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEEC
T ss_pred EeCCCCeEEEEECCCCcCCccceEEeCCC-CCC--eEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEEC
Confidence 5 556899999986211122222221122 233 788999987666544 467888986 5777777654
Q ss_pred CC----CCeEEEEEcCCCceEEee
Q 037288 462 SN----SVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 462 ~~----~~v~~v~~~p~~~~~~t~ 481 (513)
.. ..++.+++. ++.+++++
T Consensus 278 ~~g~~~~~~~~~~~~-~g~L~v~~ 300 (322)
T 2fp8_A 278 PPPFAGEHFEQIQEH-DGLLYIGT 300 (322)
T ss_dssp CTTTTTSCCCEEEEE-TTEEEEEC
T ss_pred CCCCccccceEEEEe-CCEEEEee
Confidence 32 346677774 45555554
No 245
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.73 E-value=0.0087 Score=58.17 Aligned_cols=203 Identities=10% Similarity=0.036 Sum_probs=108.5
Q ss_pred CCCEEEEEeCCeEEEEECCCCcEEEEeeeC----------CCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccccccc
Q 037288 267 NPSQAVIGTNLGAAMVDMETGMASWVCRSK----------SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRA 336 (513)
Q Consensus 267 ~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~----------~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 336 (513)
++.+++...++.|..+|..+|+.++..... ..+.+. ...++..|+.++.++.|..+|..+++... ...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W-~~~ 130 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAW-QTK 130 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEE-EEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEE-EEe
Confidence 344444445667999999999998877642 223222 22345677888899999999999887543 111
Q ss_pred cccc--CcCeEEEeeCCeEEEeE-------eecccCcccceeEeecCCCce-----EEEEEcCCCCEEEEEecCCeEEEE
Q 037288 337 GRRH--RIPYSRLQRNDRVTNEQ-------WFELKANIWPSHTTFMPSSIS-----CLQSLQLYDQYFLASSMDGTVKLY 402 (513)
Q Consensus 337 ~~~h--~~~v~~v~~~~~~~s~~-------w~~~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~~l~s~s~dg~i~lw 402 (513)
+... ..++ + ....++.++ ++..+++..-... ...... ..... .+..+++++.++.|..+
T Consensus 131 ~~~~~~~~p~--~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~--~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 131 VAGEALSRPV--V-SDGLVLIHTSNGQLQALNEADGAVKWTVN--LDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAV 203 (376)
T ss_dssp CSSCCCSCCE--E-ETTEEEEECTTSEEEEEETTTCCEEEEEE--CCC-----CCCCCCEE--ETTEEEECCTTTEEEEE
T ss_pred CCCceEcCCE--E-ECCEEEEEcCCCeEEEEECCCCcEEEEEe--CCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEE
Confidence 1111 1111 0 011333332 4444444321111 111110 00111 14567778889999999
Q ss_pred ecCCCCccceEEecCCCC--c--------eeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEc
Q 037288 403 DHRLTTRGAVQSYEGHVN--S--------HTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWR 472 (513)
Q Consensus 403 d~~~~~~~~~~~~~~h~~--~--------v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~ 472 (513)
|.. ....+..+..... . +... ..+ .+..++.++.++.|..+|..+++.+..... .....+...
T Consensus 204 d~~--tG~~~w~~~~~~~~~~~~~~~~~~~~~~-p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~ 276 (376)
T 3q7m_A 204 LME--QGQMIWQQRISQATGSTEIDRLSDVDTT-PVV--VNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIVD 276 (376)
T ss_dssp ETT--TCCEEEEEECCC-----------CCCCC-CEE--ETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEEE
T ss_pred ECC--CCcEEEEEecccCCCCcccccccccCCC-cEE--ECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceEE
Confidence 986 3334433332110 0 0000 011 256788888999999999999998877543 224455554
Q ss_pred CCCceEEeeCCCe
Q 037288 473 TQRSMGPQIEGKI 485 (513)
Q Consensus 473 p~~~~~~t~~~~~ 485 (513)
.+..++++.++.+
T Consensus 277 ~~~l~~~~~~g~l 289 (376)
T 3q7m_A 277 GNRIYLVDQNDRV 289 (376)
T ss_dssp TTEEEEEETTCCE
T ss_pred CCEEEEEcCCCeE
Confidence 3334444433333
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.70 E-value=0.013 Score=53.95 Aligned_cols=173 Identities=8% Similarity=-0.021 Sum_probs=97.4
Q ss_pred CEEEEEeCCeEEEEECCCCcE-----EEEee-eCCCeEEEEEecCCcEE-EEEeCCCeEEEEECCCCccccccccccccC
Q 037288 269 SQAVIGTNLGAAMVDMETGMA-----SWVCR-SKSDILAQQVIHSGNVV-LCGFRNGAIVTVDVRKRQRGCSSRAGRRHR 341 (513)
Q Consensus 269 ~~l~s~s~~~i~vwd~~~~~~-----~~~~~-~~~~V~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~ 341 (513)
.+|..+..+.|+.+++..... ...+. ....+..++|++++..| ++-..++.|..+|+....... .+....
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~---~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT---IIRQDL 78 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE---EECTTC
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE---EEECCC
Confidence 445555555688888775432 11222 22347899999976544 454557899999987553211 000000
Q ss_pred cCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEE-EEEecCCeEEEEecCCCCccceEEe-cCCC
Q 037288 342 IPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYF-LASSMDGTVKLYDHRLTTRGAVQSY-EGHV 419 (513)
Q Consensus 342 ~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~s~dg~i~lwd~~~~~~~~~~~~-~~h~ 419 (513)
..... +++++++..| ++-...+.|.++|+. ......+ ....
T Consensus 79 ---------------------------------~~p~~-ia~d~~~~~lyv~d~~~~~I~~~~~~---g~~~~~~~~~~~ 121 (267)
T 1npe_A 79 ---------------------------------GSPEG-IALDHLGRTIFWTDSQLDRIEVAKMD---GTQRRVLFDTGL 121 (267)
T ss_dssp ---------------------------------CCEEE-EEEETTTTEEEEEETTTTEEEEEETT---SCSCEEEECSSC
T ss_pred ---------------------------------CCccE-EEEEecCCeEEEEECCCCEEEEEEcC---CCCEEEEEECCC
Confidence 11222 3566655444 444557889999985 2222222 2111
Q ss_pred CceeEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCeEEEEe-cCCCCCeEEEEEcCC-CceEEeeCCC
Q 037288 420 NSHTRIQLGVDQSERFVMSGGE---DCKLRIWSIRSGELVFED-KFSNSVPSAVCWRTQ-RSMGPQIEGK 484 (513)
Q Consensus 420 ~~v~~~~~~~s~~g~~l~sg~~---Dg~v~vwd~~~~~~~~~~-~~~~~~v~~v~~~p~-~~~~~t~~~~ 484 (513)
... ..++++|++..|+.+.. .+.|..+++.... ...+ .........++++++ +.++++....
T Consensus 122 ~~P--~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 122 VNP--RGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp SSE--EEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCc--cEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCC
Confidence 222 34889997666665554 3688888876433 2222 222345889999996 5666666543
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.69 E-value=0.0023 Score=58.87 Aligned_cols=151 Identities=7% Similarity=-0.000 Sum_probs=94.6
Q ss_pred EEEEeeeCCC--eEEEEEecCCcEEEEEeC--CCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCc
Q 037288 289 ASWVCRSKSD--ILAQQVIHSGNVVLCGFR--NGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKAN 364 (513)
Q Consensus 289 ~~~~~~~~~~--V~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~ 364 (513)
.+..+.|... ...++|++++.++++.+. ++.|.++|+.+++... ...+..+
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~-~i~l~~~------------------------ 65 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVEN-IHKMDDS------------------------ 65 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEE-EEECCTT------------------------
T ss_pred EEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEE-EEecCCC------------------------
Confidence 4555666643 589999998765555543 6899999999887533 0001110
Q ss_pred ccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCc
Q 037288 365 IWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCK 444 (513)
Q Consensus 365 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~ 444 (513)
..... ..+. .++.+++.-.++.+.++|.. ....+.++...... . +.+++||+.|+.+..++.
T Consensus 66 ----------~fgeG-i~~~-g~~lyv~t~~~~~v~viD~~--t~~v~~~i~~g~~~--g--~glt~Dg~~l~vs~gs~~ 127 (266)
T 2iwa_A 66 ----------YFGEG-LTLL-NEKLYQVVWLKNIGFIYDRR--TLSNIKNFTHQMKD--G--WGLATDGKILYGSDGTSI 127 (266)
T ss_dssp ----------CCEEE-EEEE-TTEEEEEETTCSEEEEEETT--TTEEEEEEECCSSS--C--CEEEECSSSEEEECSSSE
T ss_pred ----------cceEE-EEEe-CCEEEEEEecCCEEEEEECC--CCcEEEEEECCCCC--e--EEEEECCCEEEEECCCCe
Confidence 00011 1222 23444455568999999986 44566777532111 2 334567877777777899
Q ss_pred EEEEeCCCCeEEEEecCCC-----CCeEEEEEcCCCceEEeeCC
Q 037288 445 LRIWSIRSGELVFEDKFSN-----SVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 445 v~vwd~~~~~~~~~~~~~~-----~~v~~v~~~p~~~~~~t~~~ 483 (513)
|.++|..+.+.+..+.... ..++.+.|. ++.++++...
T Consensus 128 l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~ 170 (266)
T 2iwa_A 128 LYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ 170 (266)
T ss_dssp EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred EEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCC
Confidence 9999999999888865321 136788888 6677777643
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.67 E-value=0.045 Score=59.11 Aligned_cols=219 Identities=7% Similarity=-0.049 Sum_probs=132.5
Q ss_pred cCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee---------eCCCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 256 KCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR---------SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 256 ~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~---------~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
...|.++...++|.+.+...++++..||..+++...... ....|.++...++|++|..|+.++-|..+|..
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 357999999999887765556689999998876544331 12458999988888867778887889999988
Q ss_pred CCcccccccccc--ccCcCeEEEeeCC--eEEEeE------eecccCcccceeEe----e-cCCCceEEEEEcCCCCEEE
Q 037288 327 KRQRGCSSRAGR--RHRIPYSRLQRND--RVTNEQ------WFELKANIWPSHTT----F-MPSSISCLQSLQLYDQYFL 391 (513)
Q Consensus 327 ~~~~~~~~~~~~--~h~~~v~~v~~~~--~~~s~~------w~~~~~~~~~~~~~----~-~~~~v~~~~~~~~~~~~l~ 391 (513)
+++... +.... -+...|.++...+ .+..++ |+...+........ . ....+.++ ...+++.+.+
T Consensus 436 ~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i-~~d~~g~lWi 513 (795)
T 4a2l_A 436 SGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTL-FRDSHKRLWI 513 (795)
T ss_dssp TCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEE-EECTTCCEEE
T ss_pred CCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEE-EECCCCCEEE
Confidence 765322 11100 2345688887765 444443 44333322111100 0 11345554 4566676555
Q ss_pred EEecCCeEEEEecCCCCccceEEec-------CCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC---
Q 037288 392 ASSMDGTVKLYDHRLTTRGAVQSYE-------GHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF--- 461 (513)
Q Consensus 392 s~s~dg~i~lwd~~~~~~~~~~~~~-------~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~--- 461 (513)
|+. +-+..||.. .... .+. ...+.+. ++..+++|.+.++. .+ -|..||..+++...-...
T Consensus 514 -gt~-~Gl~~~~~~---~~~~-~~~~~~~~~~l~~~~i~--~i~~d~~g~lWigT-~~-Gl~~~d~~~~~~~~~~~~~gl 583 (795)
T 4a2l_A 514 -GGE-EGLSVFKQE---GLDI-QKASILPVSNVTKLFTN--CIYEASNGIIWVGT-RE-GFYCFNEKDKQIKRYNTTNGL 583 (795)
T ss_dssp -EES-SCEEEEEEE---TTEE-EECCCSCSCGGGGSCEE--EEEECTTSCEEEEE-SS-CEEEEETTTTEEEEECGGGTC
T ss_pred -EeC-CceEEEeCC---CCeE-EEecCCCCCCCCCCeeE--EEEECCCCCEEEEe-CC-CceeECCCCCcEEEeCCCCCC
Confidence 444 458888874 2222 332 1123343 37778888855544 34 588999887765432111
Q ss_pred CCCCeEEEEEcCCCceEEeeCCCee
Q 037288 462 SNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 462 ~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
....|.++...+++.+.+++..++.
T Consensus 584 ~~~~i~~i~~d~~g~lWi~t~~Gl~ 608 (795)
T 4a2l_A 584 PNNVVYGILEDSFGRLWLSTNRGIS 608 (795)
T ss_dssp SCSCEEEEEECTTSCEEEEETTEEE
T ss_pred chhheEEEEECCCCCEEEEcCCceE
Confidence 2345888999888777776666655
No 249
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.59 E-value=0.0026 Score=68.44 Aligned_cols=157 Identities=9% Similarity=-0.050 Sum_probs=87.9
Q ss_pred cEEEEEEc-CCCCEEEEEeC----C--eEEEEECCCC-cEEEEeeeCCCeEEEEEecCCcEEEEEeCC-----CeEEEEE
Q 037288 258 TVWTADFC-TNPSQAVIGTN----L--GAAMVDMETG-MASWVCRSKSDILAQQVIHSGNVVLCGFRN-----GAIVTVD 324 (513)
Q Consensus 258 ~V~~~~~s-~~g~~l~s~s~----~--~i~vwd~~~~-~~~~~~~~~~~V~~l~~~~~~~~l~sg~~d-----g~i~iwd 324 (513)
.+...+|| |||++||.+.+ + +|+++|+.++ +.+.. .-......+.|+|||+.|+....| ..|+.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 67889999 99999986532 1 3999999998 62110 001113568899999777666655 3677788
Q ss_pred CCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEec---CCeEEE
Q 037288 325 VRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM---DGTVKL 401 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~---dg~i~l 401 (513)
+.++.... ...+.. . ......-..++++|++|+..+. ...|.+
T Consensus 254 lgt~~~~~-~lv~~~--------------------------------~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~ 299 (751)
T 2xe4_A 254 MGKLQSED-VCLYEE--------------------------------H-NPLFSAFMYKAADTNTLCIGSQSPETAEVHL 299 (751)
T ss_dssp TTSCGGGC-EEEEEC--------------------------------C-CTTCEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred CCCCchhc-EEEEec--------------------------------C-CCceEEEEEECCCCCEEEEEecCCCCceEEE
Confidence 76654211 000000 0 0111112468899998887663 346888
Q ss_pred EecCCCCccce--EEecC-CCCceeEEEEEEcCCCCEEEEEeCC----CcEEEEeCCC
Q 037288 402 YDHRLTTRGAV--QSYEG-HVNSHTRIQLGVDQSERFVMSGGED----CKLRIWSIRS 452 (513)
Q Consensus 402 wd~~~~~~~~~--~~~~~-h~~~v~~~~~~~s~~g~~l~sg~~D----g~v~vwd~~~ 452 (513)
+|+.... ... ..+.. ....... ..|+..+.+++....+ ..|..+++.+
T Consensus 300 ~d~~~~~-~~~~~~~l~~~~~~~~~s--~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 300 LDLRKGN-AHNTLEIVRPREKGVRYD--VQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EESSSCT-TCCCEEESSCCCTTCCEE--EEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EECCCCC-CCceeEEeecCCCCceEE--EeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 8886211 122 44432 2333222 4444334444444443 3677777765
No 250
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.51 E-value=0.039 Score=52.27 Aligned_cols=172 Identities=8% Similarity=0.042 Sum_probs=100.1
Q ss_pred EEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCc-EEEEEeCCCeEEEEECCCC---ccccccccccccCcCeE
Q 037288 270 QAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGN-VVLCGFRNGAIVTVDVRKR---QRGCSSRAGRRHRIPYS 345 (513)
Q Consensus 270 ~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~---~~~~~~~~~~~h~~~v~ 345 (513)
+|..+....|+..|+.+.....+...-....+++|++++. ++.+-..++.|..+|+... .... ..+...
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~--~~~~~~----- 75 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVISRD----- 75 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE--EEECSS-----
T ss_pred EEEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE--EEEeCC-----
Confidence 4556666679999998877666666556789999998765 4445555789999998752 1100 000000
Q ss_pred EEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCCccceEEe-cCCCCcee
Q 037288 346 RLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTTRGAVQSY-EGHVNSHT 423 (513)
Q Consensus 346 ~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~-~~h~~~v~ 423 (513)
-..... +++.+ .++++++-..++.|.++|+. ......+ .......
T Consensus 76 ----------------------------~~~p~g-lavd~~~~~ly~~d~~~~~I~~~~~~---g~~~~~~~~~~~~~P- 122 (316)
T 1ijq_A 76 ----------------------------IQAPDG-LAVDWIHSNIYWTDSVLGTVSVADTK---GVKRKTLFRENGSKP- 122 (316)
T ss_dssp ----------------------------CSCCCE-EEEETTTTEEEEEETTTTEEEEEETT---SSSEEEEEECTTCCE-
T ss_pred ----------------------------CCCcCE-EEEeecCCeEEEEECCCCEEEEEeCC---CCceEEEEECCCCCc-
Confidence 011122 24454 44455555667899999985 2222222 2122222
Q ss_pred EEEEEEcCCCCEEEEEeCC--CcEEEEeCCCCeEEEEe-cCCCCCeEEEEEcCC-CceEEeeCC
Q 037288 424 RIQLGVDQSERFVMSGGED--CKLRIWSIRSGELVFED-KFSNSVPSAVCWRTQ-RSMGPQIEG 483 (513)
Q Consensus 424 ~~~~~~s~~g~~l~sg~~D--g~v~vwd~~~~~~~~~~-~~~~~~v~~v~~~p~-~~~~~t~~~ 483 (513)
..++++|.+..|+.+... +.|...++.... ...+ ...-...+.++++++ +.++.+...
T Consensus 123 -~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 123 -RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp -EEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred -ceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEECC
Confidence 347889977766655543 688888875433 3332 233456889999986 666666554
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.51 E-value=0.0089 Score=63.22 Aligned_cols=71 Identities=15% Similarity=0.230 Sum_probs=52.4
Q ss_pred EEEEcCCCCEEEEEeCC--------------------eEEEEECCCCcEEEEeeeC----------CCeEEEEEecCCc-
Q 037288 261 TADFCTNPSQAVIGTNL--------------------GAAMVDMETGMASWVCRSK----------SDILAQQVIHSGN- 309 (513)
Q Consensus 261 ~~~~s~~g~~l~s~s~~--------------------~i~vwd~~~~~~~~~~~~~----------~~V~~l~~~~~~~- 309 (513)
.+++.++..++..++.+ .|..+|..+|+.++.++.. .+.....+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 46788877777766432 3889999999999988732 2333334445775
Q ss_pred --EEEEEeCCCeEEEEECCCCccc
Q 037288 310 --VVLCGFRNGAIVTVDVRKRQRG 331 (513)
Q Consensus 310 --~l~sg~~dg~i~iwd~~~~~~~ 331 (513)
.|+.++.+|.++++|..+++..
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEEEECCCCEEEEEECCCCCEe
Confidence 7899999999999999998764
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.50 E-value=0.017 Score=54.86 Aligned_cols=186 Identities=5% Similarity=-0.117 Sum_probs=103.3
Q ss_pred cEEEEEEcCCCCEEEEE-eCCeEEEEECCCCcEEEEee-e-------------------CCCeEEEEEec-CCcEEEEEe
Q 037288 258 TVWTADFCTNPSQAVIG-TNLGAAMVDMETGMASWVCR-S-------------------KSDILAQQVIH-SGNVVLCGF 315 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~-s~~~i~vwd~~~~~~~~~~~-~-------------------~~~V~~l~~~~-~~~~l~sg~ 315 (513)
...++++.++|.++.++ .++.|..||..++....... . ...+..+++.+ +++++ .+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~-v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY-IVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE-EEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE-EEE
Confidence 45678888999855555 45679999988765433221 0 12478999997 66544 444
Q ss_pred CCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEe
Q 037288 316 RNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASS 394 (513)
Q Consensus 316 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s 394 (513)
..+.|..+|...+.... +...... .. ...... +.+.+ +|+++++-.
T Consensus 99 ~~~~i~~~d~~~g~~~~----~~~~~~~-------------------------~~---~~~p~~-i~~d~~~G~l~v~d~ 145 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQ----LATSVDG-------------------------VP---FKWLYA-VTVDQRTGIVYFTDV 145 (322)
T ss_dssp TTTEEEEECTTCEECEE----EESEETT-------------------------EE---CSCEEE-EEECTTTCCEEEEES
T ss_pred CCCCEEEEeCCCCEEEE----ecccCCC-------------------------Cc---ccccce-EEEecCCCEEEEECC
Confidence 45558888876443211 1000000 00 001122 35677 777666543
Q ss_pred c-----------------CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCe--
Q 037288 395 M-----------------DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSG-GEDCKLRIWSIRSGE-- 454 (513)
Q Consensus 395 ~-----------------dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg-~~Dg~v~vwd~~~~~-- 454 (513)
. ++.|..||.. .+.+..+......... ++++++|++|+.+ ..++.|.+|++....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~g~v~~~d~~---~~~~~~~~~~~~~p~g--ia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~ 220 (322)
T 2fp8_A 146 STLYDDRGVQQIMDTSDKTGRLIKYDPS---TKETTLLLKELHVPGG--AEVSADSSFVLVAEFLSHQIVKYWLEGPKKG 220 (322)
T ss_dssp CSSCCTTCHHHHHHHTCCCEEEEEEETT---TTEEEEEEEEESCCCE--EEECTTSSEEEEEEGGGTEEEEEESSSTTTT
T ss_pred cccccccccceehcccCCCceEEEEeCC---CCEEEEeccCCccCcc--eEECCCCCEEEEEeCCCCeEEEEECCCCcCC
Confidence 2 3668888864 2222222111111123 7899999866555 556899999987521
Q ss_pred EEEEecCCCCCeEEEEEcCCCceEEeeCC
Q 037288 455 LVFEDKFSNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 455 ~~~~~~~~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
....+....+ ...+++.+++.++++...
T Consensus 221 ~~~~~~~~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 221 TAEVLVKIPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp CEEEEEECSS-EEEEEECTTSCEEEEEEE
T ss_pred ccceEEeCCC-CCCeEECCCCCEEEEecC
Confidence 1111111223 788999999766666543
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.50 E-value=0.0077 Score=62.52 Aligned_cols=78 Identities=14% Similarity=0.250 Sum_probs=48.4
Q ss_pred CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCe-EEEEEcCC
Q 037288 396 DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVP-SAVCWRTQ 474 (513)
Q Consensus 396 dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v-~~v~~~p~ 474 (513)
+|.|..||+. ..+.+-+...+. ....-.+. ..+..++.|+.||.++.||.++|+++..++...... .-+.|..+
T Consensus 465 ~G~l~A~D~~--tG~~~W~~~~~~-~~~~g~~~--tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 465 VGSLRAMDPV--SGKVVWEHKEHL-PLWAGVLA--TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp SEEEEEECTT--TCCEEEEEEESS-CCCSCCEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred cceEEEEECC--CCCEEEEecCCC-CCcccceE--eCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEEC
Confidence 6789999986 333333333221 11110122 236788889999999999999999999887643322 22666666
Q ss_pred CceE
Q 037288 475 RSMG 478 (513)
Q Consensus 475 ~~~~ 478 (513)
+..+
T Consensus 540 G~qY 543 (582)
T 1flg_A 540 GEQY 543 (582)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 5433
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.50 E-value=0.0064 Score=55.41 Aligned_cols=146 Identities=12% Similarity=0.038 Sum_probs=91.5
Q ss_pred EEEEeeeCCC--eEEEEEecCCcEEEEEeCCC--eEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCc
Q 037288 289 ASWVCRSKSD--ILAQQVIHSGNVVLCGFRNG--AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKAN 364 (513)
Q Consensus 289 ~~~~~~~~~~--V~~l~~~~~~~~l~sg~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~ 364 (513)
.+..+.|... ...+.|+ ++.++.+.+.+| .|+++|+.+++... .
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~---~---------------------------- 80 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQ---Q---------------------------- 80 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEE---E----------------------------
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEE---E----------------------------
Confidence 4555666554 5889998 777777777776 99999999987533 1
Q ss_pred ccceeEeecCCCc--eEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC
Q 037288 365 IWPSHTTFMPSSI--SCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED 442 (513)
Q Consensus 365 ~~~~~~~~~~~~v--~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D 442 (513)
+..+... ..+ ... .++.++..-.++.+.+||.. +...+.++..... .+.++ ++++.|+.+..+
T Consensus 81 ------~~l~~~~FgeGi-t~~-g~~ly~ltw~~~~v~v~D~~--t~~~~~ti~~~~e---G~glt--~dg~~L~~SdGs 145 (262)
T 3nol_A 81 ------IELGKRYFGEGI-SDW-KDKIVGLTWKNGLGFVWNIR--NLRQVRSFNYDGE---GWGLT--HNDQYLIMSDGT 145 (262)
T ss_dssp ------EECCTTCCEEEE-EEE-TTEEEEEESSSSEEEEEETT--TCCEEEEEECSSC---CCCEE--ECSSCEEECCSS
T ss_pred ------EecCCccceeEE-EEe-CCEEEEEEeeCCEEEEEECc--cCcEEEEEECCCC---ceEEe--cCCCEEEEECCC
Confidence 1111111 111 121 23334444458899999997 5557777764322 22244 567777666667
Q ss_pred CcEEEEeCCCCeEEEEecCC--C---CCeEEEEEcCCCceEEeeC
Q 037288 443 CKLRIWSIRSGELVFEDKFS--N---SVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 443 g~v~vwd~~~~~~~~~~~~~--~---~~v~~v~~~p~~~~~~t~~ 482 (513)
+.|.++|..+.+.+..+... . ..++.+.|. ++.+++..-
T Consensus 146 ~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w 189 (262)
T 3nol_A 146 PVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW 189 (262)
T ss_dssp SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred CeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc
Confidence 88999999999988886542 1 224567776 556666653
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.50 E-value=0.076 Score=51.08 Aligned_cols=183 Identities=7% Similarity=-0.008 Sum_probs=106.3
Q ss_pred EEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEE-EEeCCCeEEEEECCCCccccccccc
Q 037288 259 VWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVL-CGFRNGAIVTVDVRKRQRGCSSRAG 337 (513)
Q Consensus 259 V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~ 337 (513)
..|.+..++ .+|..+....|+..++..............+..++|++.+..|+ +-...+.|..+++....... .+
T Consensus 36 ~~C~~~~~~-~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~---~~ 111 (349)
T 3v64_C 36 RSCKALGPE-PVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE---VV 111 (349)
T ss_dssp SCEEESSSC-CEEEEECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---EE
T ss_pred CcccccccC-ceeEeecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE---EE
Confidence 345555553 45555555668888888766655555556689999997665554 44567889999987654211 00
Q ss_pred cccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCCccceEE-e
Q 037288 338 RRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTTRGAVQS-Y 415 (513)
Q Consensus 338 ~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~~~~~~~-~ 415 (513)
.... ..... +++.+ .++++++-...+.|.+.++. ...... +
T Consensus 112 ~~~~---------------------------------~~p~g-lavd~~~g~ly~~d~~~~~I~~~~~d---G~~~~~l~ 154 (349)
T 3v64_C 112 STGL---------------------------------ESPGG-LAVDWVHDKLYWTDSGTSRIEVANLD---GAHRKVLL 154 (349)
T ss_dssp CSSC---------------------------------SCCCE-EEEETTTTEEEEEETTTTEEEEEETT---SCSCEEEE
T ss_pred eCCC---------------------------------CCccE-EEEecCCCeEEEEcCCCCeEEEEcCC---CCceEEEE
Confidence 0000 01112 24454 34455555567889999985 222222 2
Q ss_pred cCCCCceeEEEEEEcCCCCEEEEEe-CC-CcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC-CceEEeeCCC
Q 037288 416 EGHVNSHTRIQLGVDQSERFVMSGG-ED-CKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ-RSMGPQIEGK 484 (513)
Q Consensus 416 ~~h~~~v~~~~~~~s~~g~~l~sg~-~D-g~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~~t~~~~ 484 (513)
....... ..++++|.+..|+... .+ +.|...++................+.++++|+ +.++.+....
T Consensus 155 ~~~l~~P--~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~ 224 (349)
T 3v64_C 155 WQSLEKP--RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 224 (349)
T ss_dssp CTTCSCE--EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred eCCCCCc--ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCC
Confidence 2222222 3378898766665544 34 78888887654333222333455899999975 6666666543
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.50 E-value=0.0084 Score=62.10 Aligned_cols=80 Identities=13% Similarity=0.038 Sum_probs=47.9
Q ss_pred CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCC-eEEEEEcCC
Q 037288 396 DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSV-PSAVCWRTQ 474 (513)
Q Consensus 396 dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~-v~~v~~~p~ 474 (513)
+|.|..||+. ..+.+-++.... .+.. ..+...+..++.++.||.|+.||.++|+++..+...... -.-+.+..+
T Consensus 443 ~g~l~a~D~~--tG~~~W~~~~~~-~~~~--~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~ 517 (571)
T 2ad6_A 443 MGQIRAFDLT--TGKAKWTKWEKF-AAWG--GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFK 517 (571)
T ss_dssp CEEEEEECTT--TCCEEEEEEESS-CCCS--BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCeEEEEECC--CCCEEEEecCCC-Cccc--eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEEC
Confidence 5788889986 333444443211 1111 111224667888999999999999999999987654322 122345556
Q ss_pred CceEEe
Q 037288 475 RSMGPQ 480 (513)
Q Consensus 475 ~~~~~t 480 (513)
+.+++.
T Consensus 518 G~~yv~ 523 (571)
T 2ad6_A 518 GKQYIG 523 (571)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 544443
No 257
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.43 E-value=0.011 Score=54.01 Aligned_cols=146 Identities=7% Similarity=-0.055 Sum_probs=93.4
Q ss_pred EEEEeeeCCC--eEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCccc
Q 037288 289 ASWVCRSKSD--ILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIW 366 (513)
Q Consensus 289 ~~~~~~~~~~--V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~ 366 (513)
.+..+.|... ...+.|+ ++.+..+.+.+|.|+++|+.+++....+ +... ..
T Consensus 45 Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~---~F--------------------- 97 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGN---IF--------------------- 97 (268)
T ss_dssp EEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTT---CC---------------------
T ss_pred EEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCC---cc---------------------
Confidence 4455555544 5788887 4677888888999999999998764411 1110 00
Q ss_pred ceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEE
Q 037288 367 PSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLR 446 (513)
Q Consensus 367 ~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~ 446 (513)
...+ .+. .++.++..-.++.+.+||.. +...+.++...... .. ++ ++++.|+.+..++.|.
T Consensus 98 ----------geGi-t~~-g~~Ly~ltw~~~~v~V~D~~--Tl~~~~ti~~~~eG-wG--Lt--~Dg~~L~vSdGs~~l~ 158 (268)
T 3nok_A 98 ----------AEGL-ASD-GERLYQLTWTEGLLFTWSGM--PPQRERTTRYSGEG-WG--LC--YWNGKLVRSDGGTMLT 158 (268)
T ss_dssp ----------EEEE-EEC-SSCEEEEESSSCEEEEEETT--TTEEEEEEECSSCC-CC--EE--EETTEEEEECSSSEEE
T ss_pred ----------eeEE-EEe-CCEEEEEEccCCEEEEEECC--cCcEEEEEeCCCce-eE--Ee--cCCCEEEEECCCCEEE
Confidence 0111 222 34445555568999999996 45577777642222 22 44 5688888777799999
Q ss_pred EEeCCCCeEEEEecCCC-----CCeEEEEEcCCCceEEee
Q 037288 447 IWSIRSGELVFEDKFSN-----SVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 447 vwd~~~~~~~~~~~~~~-----~~v~~v~~~p~~~~~~t~ 481 (513)
++|..+.+.+..+.... ..++.+.|. ++.+++..
T Consensus 159 ~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanv 197 (268)
T 3nok_A 159 FHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANI 197 (268)
T ss_dssp EECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred EEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEE
Confidence 99999999888865421 235667777 55666666
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.42 E-value=0.069 Score=52.17 Aligned_cols=181 Identities=7% Similarity=-0.014 Sum_probs=105.4
Q ss_pred EEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCc-EEEEEeCCCeEEEEECCCCccccccccccc
Q 037288 261 TADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGN-VVLCGFRNGAIVTVDVRKRQRGCSSRAGRR 339 (513)
Q Consensus 261 ~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 339 (513)
|.+..+ ..+|..+....|+.+++.......+......+..++|++.+. ++.+-...+.|..+++....... .+..
T Consensus 81 C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~---~~~~ 156 (386)
T 3v65_B 81 CKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE---VVST 156 (386)
T ss_dssp EEECSS-CCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE---EECS
T ss_pred ECCccc-cceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE---EEeC
Confidence 444444 345555556678889988776655555556689999997654 44454567889999987654211 0000
Q ss_pred cCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCC-CCEEEEEecCCeEEEEecCCCCccceEE-ecC
Q 037288 340 HRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQS-YEG 417 (513)
Q Consensus 340 h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~s~dg~i~lwd~~~~~~~~~~~-~~~ 417 (513)
.. ..... +++.+. +.++++-...+.|.+.++. ...... +..
T Consensus 157 ~~---------------------------------~~p~g-lavd~~~g~lY~~d~~~~~I~~~~~d---g~~~~~l~~~ 199 (386)
T 3v65_B 157 GL---------------------------------ESPGG-LAVDWVHDKLYWTDSGTSRIEVANLD---GAHRKVLLWQ 199 (386)
T ss_dssp SC---------------------------------SCCCC-EEEETTTTEEEEEETTTTEEEECBTT---SCSCEEEECS
T ss_pred CC---------------------------------CCccE-EEEEeCCCeEEEEcCCCCeEEEEeCC---CCceEEeecC
Confidence 00 01111 244543 4455555567788888874 222222 222
Q ss_pred CCCceeEEEEEEcCCCCEEEEEeC-C-CcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC-CceEEeeCCC
Q 037288 418 HVNSHTRIQLGVDQSERFVMSGGE-D-CKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ-RSMGPQIEGK 484 (513)
Q Consensus 418 h~~~v~~~~~~~s~~g~~l~sg~~-D-g~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~~t~~~~ 484 (513)
..... ..++++|.+..|+.... + +.|...++................+.++++|+ +.++.+....
T Consensus 200 ~l~~P--~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 200 SLEKP--RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp SCSCE--EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTT
T ss_pred CCCCC--cEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCC
Confidence 22222 33788887776665543 3 67888887654433333333455889999975 6666665443
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.41 E-value=0.014 Score=52.62 Aligned_cols=145 Identities=9% Similarity=0.019 Sum_probs=90.1
Q ss_pred EEEEeeeCCC--eEEEEEecCCcEEEEEeCC--CeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCc
Q 037288 289 ASWVCRSKSD--ILAQQVIHSGNVVLCGFRN--GAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKAN 364 (513)
Q Consensus 289 ~~~~~~~~~~--V~~l~~~~~~~~l~sg~~d--g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~ 364 (513)
.+..+.|... +..+.|+. +.++.+.+.+ +.|+.+|+.+++... .
T Consensus 11 v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~---~---------------------------- 58 (243)
T 3mbr_X 11 VVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQ---R---------------------------- 58 (243)
T ss_dssp EEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEE---E----------------------------
T ss_pred EEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEE---E----------------------------
Confidence 4556666654 67999986 6666666665 499999999887533 1
Q ss_pred ccceeEeecCCCc--eEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC
Q 037288 365 IWPSHTTFMPSSI--SCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED 442 (513)
Q Consensus 365 ~~~~~~~~~~~~v--~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D 442 (513)
+..+... ..+ .+. .++.++..-.++.+.+||.. +...+.++..... .+.++ ++++.|+.+..+
T Consensus 59 ------~~l~~~~fgeGi-~~~-~~~ly~ltw~~~~v~v~D~~--tl~~~~ti~~~~~---Gwglt--~dg~~L~vSdgs 123 (243)
T 3mbr_X 59 ------AEVPPPYFGAGI-VAW-RDRLIQLTWRNHEGFVYDLA--TLTPRARFRYPGE---GWALT--SDDSHLYMSDGT 123 (243)
T ss_dssp ------EECCTTCCEEEE-EEE-TTEEEEEESSSSEEEEEETT--TTEEEEEEECSSC---CCEEE--ECSSCEEEECSS
T ss_pred ------EeCCCCcceeEE-EEe-CCEEEEEEeeCCEEEEEECC--cCcEEEEEeCCCC---ceEEe--eCCCEEEEECCC
Confidence 1111111 111 221 34445555568999999986 4557777764322 22244 557666666678
Q ss_pred CcEEEEeCCCCeEEEEecCCC-----CCeEEEEEcCCCceEEee
Q 037288 443 CKLRIWSIRSGELVFEDKFSN-----SVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 443 g~v~vwd~~~~~~~~~~~~~~-----~~v~~v~~~p~~~~~~t~ 481 (513)
+.|.++|..+.+.+..+.... ..++.+.|. ++.+++..
T Consensus 124 ~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 124 AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence 999999999999888865421 235566666 44455554
No 260
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.38 E-value=0.016 Score=61.55 Aligned_cols=57 Identities=21% Similarity=0.183 Sum_probs=42.9
Q ss_pred CCeEEEEECCCCcEEEEeeeC--C-----------------------------C-eEEEEEecCCcEEEEEeCCCe----
Q 037288 276 NLGAAMVDMETGMASWVCRSK--S-----------------------------D-ILAQQVIHSGNVVLCGFRNGA---- 319 (513)
Q Consensus 276 ~~~i~vwd~~~~~~~~~~~~~--~-----------------------------~-V~~l~~~~~~~~l~sg~~dg~---- 319 (513)
++.|..||..+|+.++.+... . . ...++++|++.+|+.++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 456999999999998877521 0 0 125788898899999988864
Q ss_pred ---------------EEEEECCCCcccc
Q 037288 320 ---------------IVTVDVRKRQRGC 332 (513)
Q Consensus 320 ---------------i~iwd~~~~~~~~ 332 (513)
|..+|.++++...
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W 289 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVW 289 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeE
Confidence 8888988887543
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.16 E-value=0.039 Score=57.24 Aligned_cols=54 Identities=20% Similarity=0.191 Sum_probs=40.2
Q ss_pred eEEEEECCCCcEEEEeeeCC-----------CeEEEEEe-cCC---cEEEEEeCCCeEEEEECCCCcccc
Q 037288 278 GAAMVDMETGMASWVCRSKS-----------DILAQQVI-HSG---NVVLCGFRNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 278 ~i~vwd~~~~~~~~~~~~~~-----------~V~~l~~~-~~~---~~l~sg~~dg~i~iwd~~~~~~~~ 332 (513)
.|..+|..+|+.++.++... ++. +... .+| .+++.++.+|.++++|.++++...
T Consensus 279 sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 279 TIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred eEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEee
Confidence 68999999999999887321 122 2222 467 578889999999999999887643
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.15 E-value=0.14 Score=50.18 Aligned_cols=177 Identities=8% Similarity=0.011 Sum_probs=102.7
Q ss_pred CEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEE-eCCCeEEEEECCCCccccccccccccCcCeEEE
Q 037288 269 SQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCG-FRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRL 347 (513)
Q Consensus 269 ~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v 347 (513)
.+|..+....|+..++.......+......+..++|++.+..|+.. ...+.|+.+++...........+...
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~------- 156 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR------- 156 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS-------
T ss_pred ceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC-------
Confidence 3666666778999999877666666666778999999866555544 45788988888653210000000000
Q ss_pred eeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCCccceEEe-cCCCCceeEE
Q 037288 348 QRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTTRGAVQSY-EGHVNSHTRI 425 (513)
Q Consensus 348 ~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~-~~h~~~v~~~ 425 (513)
....... +++.+ .++++++-...+.|.+.|+. ......+ ....... .
T Consensus 157 -------------------------~~~~p~g-lavD~~~~~lY~~d~~~~~I~~~~~~---g~~~~~l~~~~~~~P--~ 205 (400)
T 3p5b_L 157 -------------------------DIQAPDG-LAVDWIHSNIYWTDSVLGTVSVADTK---GVKRKTLFRENGSKP--R 205 (400)
T ss_dssp -------------------------SCSCEEE-EEEETTTTEEEEEETTTTEEEEECTT---TCSEEEEEECSSCCE--E
T ss_pred -------------------------CCCCccc-EEEEecCCceEEEECCCCeEEEEeCC---CCceEEEEeCCCCCc--c
Confidence 0011122 24554 45555555567889999884 3322222 2222222 3
Q ss_pred EEEEcCCCCEEEEEeC--CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC-CceEEeeCC
Q 037288 426 QLGVDQSERFVMSGGE--DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ-RSMGPQIEG 483 (513)
Q Consensus 426 ~~~~s~~g~~l~sg~~--Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~~t~~~ 483 (513)
.++++|.+.+|+.... .+.|...++............-...+.+++++. +.++.+...
T Consensus 206 ~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~ 266 (400)
T 3p5b_L 206 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 266 (400)
T ss_dssp EEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC
Confidence 4888997776665543 478999998655443333333456899999976 666666543
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.11 E-value=0.38 Score=51.63 Aligned_cols=220 Identities=10% Similarity=0.024 Sum_probs=123.5
Q ss_pred cCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee---------------eCCCeEEEEEecCCcEEEEEeCCCeE
Q 037288 256 KCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR---------------SKSDILAQQVIHSGNVVLCGFRNGAI 320 (513)
Q Consensus 256 ~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~---------------~~~~V~~l~~~~~~~~l~sg~~dg~i 320 (513)
...|.++...++|.+.+....++|.++|..++....... ....|.++...++|+ |-.|+.++-|
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl 335 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGI 335 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCE
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeE
Confidence 357999999888876654444789999988775432211 234589998888876 4556667778
Q ss_pred EEEECCCCcccccccc-------ccccCcCeEEEeeCC--eEEEeE-------eecccCcccceeE-eec-CCCceEEEE
Q 037288 321 VTVDVRKRQRGCSSRA-------GRRHRIPYSRLQRND--RVTNEQ-------WFELKANIWPSHT-TFM-PSSISCLQS 382 (513)
Q Consensus 321 ~iwd~~~~~~~~~~~~-------~~~h~~~v~~v~~~~--~~~s~~-------w~~~~~~~~~~~~-~~~-~~~v~~~~~ 382 (513)
..++........ +.. -.-....|.++...+ .+..|+ ++...+....... ... ...|.++ .
T Consensus 336 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i-~ 413 (781)
T 3v9f_A 336 NFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCS-L 413 (781)
T ss_dssp EEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEE-E
T ss_pred EEeCCCCCccee-eccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEE-E
Confidence 888887654221 110 011235688887765 444443 3322221111000 011 2334444 3
Q ss_pred EcCCCCEEEEEecCCeEEEEecCCCCccceEEecC---CCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 037288 383 LQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEG---HVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFED 459 (513)
Q Consensus 383 ~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~---h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~ 459 (513)
..+++.+ ..|+.++-+..+|.. .+.+..+.. ....|.. +..+++|.+ ..|+. +-|..||..+++.....
T Consensus 414 ~d~~g~l-Wigt~~~Gl~~~~~~---~~~~~~~~~~~~~~~~v~~--i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 414 KDSEGNL-WFGTYLGNISYYNTR---LKKFQIIELEKNELLDVRV--FYEDKNKKI-WIGTH-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp ECTTSCE-EEEETTEEEEEECSS---SCEEEECCSTTTCCCCEEE--EEECTTSEE-EEEET-TEEEEEESSSSSCCEEE
T ss_pred ECCCCCE-EEEeccCCEEEEcCC---CCcEEEeccCCCCCCeEEE--EEECCCCCE-EEEEC-CceEEEeCCCCeEEecc
Confidence 4445654 447776778889874 333444431 2334444 667777764 44555 55999998877654332
Q ss_pred cCC-----CCCeEEEEEcCCCceEEeeC-CCee
Q 037288 460 KFS-----NSVPSAVCWRTQRSMGPQIE-GKIH 486 (513)
Q Consensus 460 ~~~-----~~~v~~v~~~p~~~~~~t~~-~~~~ 486 (513)
... ...|.+++..+++.+.++.. .++.
T Consensus 486 ~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~ 518 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVG 518 (781)
T ss_dssp CTTTSSCSCSCEEEEEECTTCCEEEEESSSCEE
T ss_pred cCcccccccceeEEEEEcCCCCEEEEEcCCCEE
Confidence 222 35689999888866555443 5554
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.11 E-value=0.014 Score=62.79 Aligned_cols=146 Identities=12% Similarity=0.009 Sum_probs=86.0
Q ss_pred CeEEEEEe-cCCcEEEEEe-CCC----eEEEEECCCC-ccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeE
Q 037288 298 DILAQQVI-HSGNVVLCGF-RNG----AIVTVDVRKR-QRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHT 370 (513)
Q Consensus 298 ~V~~l~~~-~~~~~l~sg~-~dg----~i~iwd~~~~-~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~ 370 (513)
.+...+|+ |||+.|+-+. .+| .|+++|+.++ +... . .+..+ +
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~------~---~~~~~-~--------------------- 223 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA------D---KVSGT-N--------------------- 223 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC------C---CEEEE-C---------------------
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC------c---cccCc-e---------------------
Confidence 47889999 9998776443 333 5999999887 5211 0 01110 0
Q ss_pred eecCCCceEEEEEcCCCCEEEEEecC-----CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeC---C
Q 037288 371 TFMPSSISCLQSLQLYDQYFLASSMD-----GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE---D 442 (513)
Q Consensus 371 ~~~~~~v~~~~~~~~~~~~l~s~s~d-----g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~---D 442 (513)
. -..|+|+++.|+....| ..|.++++..........+...... ....+.|+|||++|+..+. .
T Consensus 224 -------~-~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~ 294 (751)
T 2xe4_A 224 -------G-EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPL-FSAFMYKAADTNTLCIGSQSPET 294 (751)
T ss_dssp -------S-CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTT-CEEEEEECTTSSEEEEEEECSSC
T ss_pred -------e-eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCc-eEEEEEECCCCCEEEEEecCCCC
Confidence 0 03678899888877765 2577788752211123334322222 1244789999998876553 4
Q ss_pred CcEEEEeCCCC--eE-EEEe-cCCCCCeEEEEEcCCCceEEeeCC
Q 037288 443 CKLRIWSIRSG--EL-VFED-KFSNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 443 g~v~vwd~~~~--~~-~~~~-~~~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
..|+++|+.++ +. +..+ .....+...+.|+.+..++..+..
T Consensus 295 ~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~ 339 (751)
T 2xe4_A 295 AEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNE 339 (751)
T ss_dssp EEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECT
T ss_pred ceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCC
Confidence 46888999876 23 1333 333455667776666555554444
No 265
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.11 E-value=5.8e-05 Score=73.93 Aligned_cols=115 Identities=10% Similarity=0.099 Sum_probs=57.1
Q ss_pred CCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCC
Q 037288 307 SGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLY 386 (513)
Q Consensus 307 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 386 (513)
++..|++++.||.|+.||..+++... .+.. .++ .+. .+..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W---~~~~--~~~---------------------------------~s~-p~~~~ 48 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKW---TLKE--DPV---------------------------------LQV-PTHVE 48 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEE---EEEC--CCS---------------------------------CCC-C----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE---EecC--CCc---------------------------------eec-ceEcC
Confidence 57889999999999999999887543 1111 111 111 11235
Q ss_pred CCEEEEEecCCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCC
Q 037288 387 DQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSN 463 (513)
Q Consensus 387 ~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~ 463 (513)
+..+++++.||.|+.||.. +...+..+..+..........+. ++..|++|+.|+.|+.||..+|+.+..+..+.
T Consensus 49 g~~~v~~s~dg~l~a~d~~--tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~ 122 (369)
T 2hz6_A 49 EPAFLPDPNDGSLYTLGSK--NNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF 122 (369)
T ss_dssp -CCEEECTTTCCEEEC-------CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC------------
T ss_pred CCEEEEeCCCCEEEEEECC--CCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC
Confidence 6677777899999999985 33344455433211000000111 35578888889999999999999887766543
No 266
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.06 E-value=0.059 Score=50.82 Aligned_cols=168 Identities=7% Similarity=-0.007 Sum_probs=98.7
Q ss_pred CcEEEEEEcCCCC-EEEEE-eCCeEEEEECCCCcEEEE-eee-----CC--CeEEEEE---ecCCcEEEEEe--------
Q 037288 257 CTVWTADFCTNPS-QAVIG-TNLGAAMVDMETGMASWV-CRS-----KS--DILAQQV---IHSGNVVLCGF-------- 315 (513)
Q Consensus 257 ~~V~~~~~s~~g~-~l~s~-s~~~i~vwd~~~~~~~~~-~~~-----~~--~V~~l~~---~~~~~~l~sg~-------- 315 (513)
----+++|++... ++++. ..++|..||...+....+ +.. .. .+..|.| .|++.++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 3345778887444 44444 477899999986654433 221 11 2589999 68887777644
Q ss_pred -----CCCeEEEEECC---CCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCC
Q 037288 316 -----RNGAIVTVDVR---KRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYD 387 (513)
Q Consensus 316 -----~dg~i~iwd~~---~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 387 (513)
.+..|..+|+. +++... ...+......+.. ..+. ....... +...++|
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~-~~dL~~~~~~~~~--------------~~g~--------~~~~~nD-vavD~~G 148 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVW-SVNFEKVQDEFEK--------------KAGK--------RPFGVVQ-SAQDRDG 148 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSE-EEESHHHHHHHHH--------------HHSS--------CCEEEEE-EEECTTS
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEE-EecCccccccccc--------------cccc--------cccCCce-eEECCCC
Confidence 26789999998 555432 1111111000000 0000 0000111 4677899
Q ss_pred CEEEEEecC-CeEEEEecCCCCccceEEec-CC-----CCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 037288 388 QYFLASSMD-GTVKLYDHRLTTRGAVQSYE-GH-----VNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSG 453 (513)
Q Consensus 388 ~~l~s~s~d-g~i~lwd~~~~~~~~~~~~~-~h-----~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~ 453 (513)
+..++++.. +.|...+.. ...+..+. .. ....+. ++++|+|+.|++...+|.|.-+|+.+.
T Consensus 149 naYVt~s~~~~~I~rV~pd---G~~~~~~~~~~~~~~~~~G~nG--Iv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 149 NSYVAFALGMPAIARVSAD---GKTVSTFAWESGNGGQRPGYSG--ITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CEEEEEEESSCEEEEECTT---SCCEEEEEECCCCSSSCCSCSE--EEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CEEEeCCCCCCeEEEEeCC---CCEEeeeeecCCCcccccCcce--EEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 999988888 887777763 22233221 11 111334 788999999888877999999998854
No 267
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.04 E-value=0.044 Score=57.78 Aligned_cols=71 Identities=14% Similarity=-0.007 Sum_probs=48.1
Q ss_pred EEEEcC-CCCEEEEEeCC------------eEEEEECCCCcEE--EEee--eCCCeEEEEEecCCcEEEEEeC-CCeEEE
Q 037288 261 TADFCT-NPSQAVIGTNL------------GAAMVDMETGMAS--WVCR--SKSDILAQQVIHSGNVVLCGFR-NGAIVT 322 (513)
Q Consensus 261 ~~~~s~-~g~~l~s~s~~------------~i~vwd~~~~~~~--~~~~--~~~~V~~l~~~~~~~~l~sg~~-dg~i~i 322 (513)
.+++.+ ++++++.|+.+ .+.+||..+++-. .... +.....++++..++.+++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 88888877521 3788999887622 2222 2222445777889999999984 568999
Q ss_pred EECCCCccc
Q 037288 323 VDVRKRQRG 331 (513)
Q Consensus 323 wd~~~~~~~ 331 (513)
||..+.+..
T Consensus 270 yd~~t~~W~ 278 (656)
T 1k3i_A 270 YDSSSDSWI 278 (656)
T ss_dssp EEGGGTEEE
T ss_pred ecCcCCcee
Confidence 999876543
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.99 E-value=0.3 Score=47.58 Aligned_cols=182 Identities=8% Similarity=-0.081 Sum_probs=102.0
Q ss_pred CcEEEEEEcCCCCEEE-EE-eCCeEEEEECCCCcEEEEeee-CCCeEEEEEecCC-cEEEEEeCCCeEEEEECCCCcccc
Q 037288 257 CTVWTADFCTNPSQAV-IG-TNLGAAMVDMETGMASWVCRS-KSDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~-s~-s~~~i~vwd~~~~~~~~~~~~-~~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~ 332 (513)
..+..++|++.+..|. +- ..+.|..+++..+....+... ......+++.+.+ +++++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 4578999997555444 44 345688999987765444432 2345778888754 555555567788888876443211
Q ss_pred ccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe-cC-CeEEEEecCCCCcc
Q 037288 333 SSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS-MD-GTVKLYDHRLTTRG 410 (513)
Q Consensus 333 ~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s-~d-g~i~lwd~~~~~~~ 410 (513)
.+..... .... +++.|.+..|..+. .+ +.|..+++. ..
T Consensus 196 ---l~~~~l~---------------------------------~P~g-iavdp~~g~ly~td~~~~~~I~r~~~d---G~ 235 (386)
T 3v65_B 196 ---LLWQSLE---------------------------------KPRA-IALHPMEGTIYWTDWGNTPRIEASSMD---GS 235 (386)
T ss_dssp ---EECSSCS---------------------------------CEEE-EEEETTTTEEEEEECSSSCEEEEEETT---SC
T ss_pred ---eecCCCC---------------------------------CCcE-EEEEcCCCeEEEeccCCCCEEEEEeCC---CC
Confidence 0010111 1122 34555555444443 34 678888874 22
Q ss_pred ceEEe-cCCCCceeEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEee
Q 037288 411 AVQSY-EGHVNSHTRIQLGVDQSERFVMSG-GEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 411 ~~~~~-~~h~~~v~~~~~~~s~~g~~l~sg-~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~ 481 (513)
....+ ....... ..++++|+++.|+.+ ...+.|..+|+........+........++++..+ .++.+.
T Consensus 236 ~~~~~~~~~~~~P--nGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~-~ly~td 305 (386)
T 3v65_B 236 GRRIIADTHLFWP--NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFED-SLYWTD 305 (386)
T ss_dssp SCEEEECSSCSCE--EEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETT-EEEEEE
T ss_pred CcEEEEECCCCCe--eeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECC-EEEEee
Confidence 23233 2222222 338889876666554 45678999998754433333333445678888444 444444
No 269
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.97 E-value=0.24 Score=53.26 Aligned_cols=185 Identities=11% Similarity=0.035 Sum_probs=108.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee----eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccc
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR----SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~----~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 332 (513)
..|.++...++|.+.+...++++..+|..++....... ....|.++...++|++.+ |+.++-+..+|..+++...
T Consensus 363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~ 441 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQI 441 (781)
T ss_dssp SCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEE
T ss_pred cceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEE
Confidence 57999999888887765556789999987654322111 234589998887777554 6676778889887654321
Q ss_pred ccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccce
Q 037288 333 SSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAV 412 (513)
Q Consensus 333 ~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~ 412 (513)
+....-.... +.++ ...+++. |..|+. +-|..||.. . ...
T Consensus 442 -~~~~~~~~~~---------------------------------v~~i-~~d~~g~-lwigt~-~Gl~~~~~~--~-~~~ 481 (781)
T 3v9f_A 442 -IELEKNELLD---------------------------------VRVF-YEDKNKK-IWIGTH-AGVFVIDLA--S-KKV 481 (781)
T ss_dssp -CCSTTTCCCC---------------------------------EEEE-EECTTSE-EEEEET-TEEEEEESS--S-SSC
T ss_pred -eccCCCCCCe---------------------------------EEEE-EECCCCC-EEEEEC-CceEEEeCC--C-CeE
Confidence 1000001112 2222 3344554 455565 568889875 2 222
Q ss_pred EEec-CC-----CCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC---CCCCeEEEEEcCCCceEEeeCC
Q 037288 413 QSYE-GH-----VNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF---SNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 413 ~~~~-~h-----~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~---~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
..+. .. ...+.. +..+++|.+.+ |+.++-|..||..+++...-... ....|.++...+++.+.+++..
T Consensus 482 ~~~~~~~~~~~~~~~i~~--i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~ 558 (781)
T 3v9f_A 482 IHHYDTSNSQLLENFVRS--IAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGE 558 (781)
T ss_dssp CEEECTTTSSCSCSCEEE--EEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETT
T ss_pred EecccCcccccccceeEE--EEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECC
Confidence 2222 11 234444 77788887554 45544588899877764432211 2346889999888766655555
Q ss_pred Ce
Q 037288 484 KI 485 (513)
Q Consensus 484 ~~ 485 (513)
++
T Consensus 559 Gl 560 (781)
T 3v9f_A 559 GL 560 (781)
T ss_dssp EE
T ss_pred Cc
Confidence 55
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.90 E-value=0.33 Score=46.56 Aligned_cols=182 Identities=8% Similarity=-0.080 Sum_probs=103.4
Q ss_pred CcEEEEEEcCCCCEEE-EE-eCCeEEEEECCCCcEEEEeee-CCCeEEEEEecCC-cEEEEEeCCCeEEEEECCCCcccc
Q 037288 257 CTVWTADFCTNPSQAV-IG-TNLGAAMVDMETGMASWVCRS-KSDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~-s~-s~~~i~vwd~~~~~~~~~~~~-~~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~ 332 (513)
..+..++|++....|. +- ..+.|..+++..+........ ......+++.+.+ +++++-...+.|.+.++.......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 4578999997655544 44 345688899887664444332 2346788898754 555565667899999987543211
Q ss_pred ccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCC-EEEEEecC-CeEEEEecCCCCcc
Q 037288 333 SSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQ-YFLASSMD-GTVKLYDHRLTTRG 410 (513)
Q Consensus 333 ~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~s~d-g~i~lwd~~~~~~~ 410 (513)
.+..... .... ++++|.+. ++.+-..+ +.|..+++. ..
T Consensus 153 ---l~~~~l~---------------------------------~P~~-iavdp~~g~ly~td~~~~~~I~r~~~d---G~ 192 (349)
T 3v64_C 153 ---LLWQSLE---------------------------------KPRA-IALHPMEGTIYWTDWGNTPRIEASSMD---GS 192 (349)
T ss_dssp ---EECTTCS---------------------------------CEEE-EEEETTTTEEEEEECSSSCEEEEEETT---SC
T ss_pred ---EEeCCCC---------------------------------Ccce-EEEecCcCeEEEeccCCCCEEEEEeCC---CC
Confidence 0001111 1122 35565444 44444444 778888874 33
Q ss_pred ceEEecC-CCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEee
Q 037288 411 AVQSYEG-HVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 411 ~~~~~~~-h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~ 481 (513)
....+.. ..... ..++++|+++.|+.+. ..+.|..+|+........+........++++.. +.++.+.
T Consensus 193 ~~~~~~~~~~~~P--nGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~-~~ly~td 262 (349)
T 3v64_C 193 GRRIIADTHLFWP--NGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFE-DSLYWTD 262 (349)
T ss_dssp SCEESCCSSCSCE--EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEET-TEEEEEE
T ss_pred CcEEEEECCCCCc--ceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEEC-CEEEEec
Confidence 3333321 11222 3488998776665554 467899999875443333333344567888844 4444444
No 271
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.83 E-value=0.34 Score=45.74 Aligned_cols=173 Identities=10% Similarity=0.013 Sum_probs=97.7
Q ss_pred EEEEEeCCeEEEEECCCCc--EEEEeeeCCCeEEEEEecCC-cEEEEEeCCCeEEEEECCCCccccccccccccCcCeEE
Q 037288 270 QAVIGTNLGAAMVDMETGM--ASWVCRSKSDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSR 346 (513)
Q Consensus 270 ~l~s~s~~~i~vwd~~~~~--~~~~~~~~~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 346 (513)
+|..+....|+.+|+.... ..........+.+++|++.+ .++.+-...+.|..+++....... ..+..
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~--~~~~~------- 76 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ--NVVVS------- 76 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC--EEEEE-------
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE--EEEcC-------
Confidence 4455555568889988763 22233333457799999865 455555567889999887653211 00000
Q ss_pred EeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCCccceEEe-cCCCCceeE
Q 037288 347 LQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTTRGAVQSY-EGHVNSHTR 424 (513)
Q Consensus 347 v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~-~~h~~~v~~ 424 (513)
.-..... +++.+ .++++++-...+.|.++++. ......+ .......
T Consensus 77 --------------------------~l~~p~g-lavd~~~g~ly~~d~~~~~I~~~~~d---G~~~~~l~~~~~~~P-- 124 (318)
T 3sov_A 77 --------------------------GLLSPDG-LACDWLGEKLYWTDSETNRIEVSNLD---GSLRKVLFWQELDQP-- 124 (318)
T ss_dssp --------------------------CCSCCCE-EEEETTTTEEEEEETTTTEEEEEETT---SCSCEEEECSSCSSE--
T ss_pred --------------------------CCCCccE-EEEEcCCCeEEEEECCCCEEEEEECC---CCcEEEEEeCCCCCc--
Confidence 0011122 24454 44555555567889999984 3322223 2222222
Q ss_pred EEEEEcCCCCEEEEEeC--CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC-CceEEeeCC
Q 037288 425 IQLGVDQSERFVMSGGE--DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ-RSMGPQIEG 483 (513)
Q Consensus 425 ~~~~~s~~g~~l~sg~~--Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~~t~~~ 483 (513)
..++++|.+.+|+.+.. .+.|...++............-...+.++++|+ +.++.+...
T Consensus 125 ~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~ 186 (318)
T 3sov_A 125 RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK 186 (318)
T ss_dssp EEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECC
Confidence 33788887666666553 578888887643332222333455789999985 666666543
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.79 E-value=0.054 Score=53.81 Aligned_cols=152 Identities=10% Similarity=0.009 Sum_probs=88.3
Q ss_pred cEEEEEEcC-C-CCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCC-C----eEEEEECCCCcc
Q 037288 258 TVWTADFCT-N-PSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRN-G----AIVTVDVRKRQR 330 (513)
Q Consensus 258 ~V~~~~~s~-~-g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~d-g----~i~iwd~~~~~~ 330 (513)
....++++| + +.++++-..+.|+.+|+.++....+.........++|+++|+.|+++... + .+.+++.. +..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cce
Confidence 456788987 3 44444433456999999887766655555568999999999966666542 2 23333322 211
Q ss_pred ccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCCc
Q 037288 331 GCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTTR 409 (513)
Q Consensus 331 ~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~~ 409 (513)
.. ...+ ..+.++ .. ++++| ++.++++-..++.|..+|.. .
T Consensus 217 ~~-~~~l-------------------------------~~~~~p---~g-iavdp~~g~lyv~d~~~~~V~~~~~~---~ 257 (430)
T 3tc9_A 217 KV-ITEL-------------------------------TKGQNC---NG-AETHPINGELYFNSWNAGQVFRYDFT---T 257 (430)
T ss_dssp CS-EEEE-------------------------------EECSSC---CC-EEECTTTCCEEEEETTTTEEEEEETT---T
T ss_pred ee-eeee-------------------------------ccCCCc---eE-EEEeCCCCEEEEEECCCCEEEEEECC---C
Confidence 10 0000 011111 12 35677 67766666678899999985 2
Q ss_pred cce---EEecCCCCceeEEEEEEcCCCCEEE-EEeCCCcEEEEeCCC
Q 037288 410 GAV---QSYEGHVNSHTRIQLGVDQSERFVM-SGGEDCKLRIWSIRS 452 (513)
Q Consensus 410 ~~~---~~~~~h~~~v~~~~~~~s~~g~~l~-sg~~Dg~v~vwd~~~ 452 (513)
... ...... ..- ..++|+|+|++|+ +-...+.|..++...
T Consensus 258 ~~~~~~~~~~~~-~~P--~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 258 QETTPLFTIQDS-GWE--FHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TEEEEEEECSSS-SCC--EEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CcEEEEEEcCCC-Ccc--eeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 222 122221 112 3389999999554 445678899987653
No 273
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.78 E-value=0.12 Score=50.29 Aligned_cols=162 Identities=12% Similarity=0.036 Sum_probs=92.6
Q ss_pred EcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeC-----CCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccccccccc
Q 037288 264 FCTNPSQAVIGTNLGAAMVDMETGMASWVCRSK-----SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGR 338 (513)
Q Consensus 264 ~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~-----~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 338 (513)
.+.+|..++.+.++.||.-++..+..-+.+..+ ..|..+..+|+|.+||..+ +..|.|..+..+.... . . .
T Consensus 28 ~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~-~-~-~ 103 (452)
T 3pbp_A 28 SSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNV-E-D-V 103 (452)
T ss_dssp EETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCC-C-C-H
T ss_pred EEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccC-c-c-c
Confidence 345788888888888998887744333333332 2588899999999999885 5689999887432211 0 0 0
Q ss_pred ccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC---CCCEEEEEecCCeEEEEecCCCCccceEEe
Q 037288 339 RHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL---YDQYFLASSMDGTVKLYDHRLTTRGAVQSY 415 (513)
Q Consensus 339 ~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~ 415 (513)
+-..++..-.| .+. +. .......|..+ .|+| .+..|++-..|+.|++||+......+. .+
T Consensus 104 ~~~~~~q~~ty---------~l~-----~~-~~~~~s~I~qV-lWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L 166 (452)
T 3pbp_A 104 SIQDAFQIFHY---------SID-----EE-EVGPKSSIKKV-LFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VL 166 (452)
T ss_dssp HHHHTTEEEEE---------EGG-----GC-C--CCCCEEEE-EECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EE
T ss_pred ccccccceeEE---------EcC-----Cc-ccCCCCceeEE-EeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-ch
Confidence 00011111000 000 00 00012233333 3333 466899999999999999974222244 34
Q ss_pred c---------CCCCceeEEEEEEcCCCCEEEEEe--CCCcEEEE
Q 037288 416 E---------GHVNSHTRIQLGVDQSERFVMSGG--EDCKLRIW 448 (513)
Q Consensus 416 ~---------~h~~~v~~~~~~~s~~g~~l~sg~--~Dg~v~vw 448 (513)
. .....+. +++|..++-.|.... .+|.|+-.
T Consensus 167 ~k~~~~fg~d~~~~ev~--S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 167 NKPNNSFGLDARVNDIT--DLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SCCCSEEESCSSCCCEE--EEEECTTSSCEEEEECTTSCEEEEE
T ss_pred hccccccCCCcccceEE--EEEEcCCCcEEEEEecCCCCCEEEE
Confidence 3 1223333 488888776666644 77887653
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.77 E-value=0.17 Score=50.12 Aligned_cols=153 Identities=7% Similarity=0.002 Sum_probs=86.0
Q ss_pred cEEEEEEcCC---CCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCC----e-EEEEECCCCc
Q 037288 258 TVWTADFCTN---PSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNG----A-IVTVDVRKRQ 329 (513)
Q Consensus 258 ~V~~~~~s~~---g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg----~-i~iwd~~~~~ 329 (513)
....++|+|+ +.++++-..+.|+.+|..++..............++|+++|+ |+.+...+ . +...+.. ..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~-~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA-SG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG-GT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC-CC
Confidence 4568899984 555554444679999998888766655555689999999999 44444321 1 2222221 11
Q ss_pred cccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCC
Q 037288 330 RGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTT 408 (513)
Q Consensus 330 ~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~ 408 (513)
... . .. ...+.. ... +++++ ++.++++-..++.|+.+|.. .
T Consensus 218 ~~~-------~----~~---------------------~~~~~~---P~g-iavd~~~G~lyv~d~~~~~V~~~d~~--~ 259 (433)
T 4hw6_A 218 FTE-------R----LS---------------------LCNARG---AKT-CAVHPQNGKIYYTRYHHAMISSYDPA--T 259 (433)
T ss_dssp TCC-------E----EE---------------------EEECSS---BCC-CEECTTTCCEEECBTTCSEEEEECTT--T
T ss_pred eec-------c----cc---------------------ccccCC---CCE-EEEeCCCCeEEEEECCCCEEEEEECC--C
Confidence 000 0 00 000111 111 25667 67666666667889999874 2
Q ss_pred ccceEEe-cCCCCceeEEEEEEcCCCCEEEE-EeCCCcEEEEeCC
Q 037288 409 RGAVQSY-EGHVNSHTRIQLGVDQSERFVMS-GGEDCKLRIWSIR 451 (513)
Q Consensus 409 ~~~~~~~-~~h~~~v~~~~~~~s~~g~~l~s-g~~Dg~v~vwd~~ 451 (513)
......+ ...... ....++|+|+|++|+. -...+.|+.++..
T Consensus 260 g~~~~~~~~~~~~~-~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 260 GTLTEEEVMMDTKG-SNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CCEEEEEEECSCCS-SCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEeccCCCC-CcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 2221222 211111 1124899999995554 4557889998865
No 275
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.65 E-value=0.35 Score=45.92 Aligned_cols=180 Identities=9% Similarity=0.128 Sum_probs=104.9
Q ss_pred EEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecC----Cc---EEEEEeC---CCeEEEEECC--CCccccccccc
Q 037288 270 QAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHS----GN---VVLCGFR---NGAIVTVDVR--KRQRGCSSRAG 337 (513)
Q Consensus 270 ~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~----~~---~l~sg~~---dg~i~iwd~~--~~~~~~~~~~~ 337 (513)
+|++.-.+++.+||+ +|+.+..+.. +.+..+..-|+ |. ++++..+ +.+|.+|++. +.. +..+
T Consensus 43 ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~----l~~i 116 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT----LQSM 116 (355)
T ss_dssp EEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC----EEEC
T ss_pred EEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc----eeec
Confidence 333444567999999 7888777653 56777776662 22 3444444 4899999774 222 1111
Q ss_pred cccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEE-cC-CCC-EEEEEecCCeEEEEecCCC-----Cc
Q 037288 338 RRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSL-QL-YDQ-YFLASSMDGTVKLYDHRLT-----TR 409 (513)
Q Consensus 338 ~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~~-~l~s~s~dg~i~lwd~~~~-----~~ 409 (513)
..-..++.. .+ ..+..++.+ ++ .+. ++++...+|.+..|++... ..
T Consensus 117 ~~~~~pv~t-----------------------~~---~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~ 170 (355)
T 3amr_A 117 TDPDHPIAT-----------------------AI---NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISG 170 (355)
T ss_dssp SCTTSCEEC-----------------------CC---SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEE
T ss_pred cccccCcCC-----------------------CC---CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccc
Confidence 100000000 00 111222122 44 343 6778888999999998421 12
Q ss_pred cceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCC-----CCeEEEEecC--CCCCeEEEEEc--CC--CceE
Q 037288 410 GAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIR-----SGELVFEDKF--SNSVPSAVCWR--TQ--RSMG 478 (513)
Q Consensus 410 ~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~-----~~~~~~~~~~--~~~~v~~v~~~--p~--~~~~ 478 (513)
..+++|.... .+.. +.+++....|+.+-+|.-|..++.. +++++..+.. -...+..|+.- ++ +.++
T Consensus 171 ~lVR~f~lgs-q~Eg--cvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLi 247 (355)
T 3amr_A 171 KKVRAFKMNS-QTEG--MAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLM 247 (355)
T ss_dssp EEEEEEECSS-CEEE--EEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEE
T ss_pred eEEEEecCCC-Ccce--EEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEE
Confidence 2567776443 4444 6778888899999999777777755 4566665532 12358888874 43 4678
Q ss_pred EeeCCC
Q 037288 479 PQIEGK 484 (513)
Q Consensus 479 ~t~~~~ 484 (513)
+++.++
T Consensus 248 vSsQG~ 253 (355)
T 3amr_A 248 ASSQGN 253 (355)
T ss_dssp EEEGGG
T ss_pred EEcCCC
Confidence 888665
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.63 E-value=0.62 Score=46.08 Aligned_cols=200 Identities=9% Similarity=0.032 Sum_probs=109.9
Q ss_pred eEEeccccCcEEEEEEcCCCCEEEEEeCC-----eEEEEECCCCcE-EEEeeeCCCeEEEEEec-CCcEEEEEeCCCeEE
Q 037288 249 MHLVASFKCTVWTADFCTNPSQAVIGTNL-----GAAMVDMETGMA-SWVCRSKSDILAQQVIH-SGNVVLCGFRNGAIV 321 (513)
Q Consensus 249 ~~~~~~h~~~V~~~~~s~~g~~l~s~s~~-----~i~vwd~~~~~~-~~~~~~~~~V~~l~~~~-~~~~l~sg~~dg~i~ 321 (513)
+..+.........++++++|.++++...+ .+...+...+.. ...+..-.....++++| +|.+.++-..++.|+
T Consensus 174 v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~ 253 (433)
T 4hw6_A 174 VDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMIS 253 (433)
T ss_dssp EEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEE
T ss_pred EEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEE
Confidence 33344445568999999999965555421 243344322211 11222333456788899 677766666778899
Q ss_pred EEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEE-EecCCeEE
Q 037288 322 TVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLA-SSMDGTVK 400 (513)
Q Consensus 322 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s-~s~dg~i~ 400 (513)
.+|..++.... .+... .......-+++++++++|.. -...+.|.
T Consensus 254 ~~d~~~g~~~~---~~~~~--------------------------------~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 254 SYDPATGTLTE---EEVMM--------------------------------DTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp EECTTTCCEEE---EEEEC--------------------------------SCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEECCCCeEEE---EEecc--------------------------------CCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 99987554211 00000 00011112578889985554 44578899
Q ss_pred EEecCCCCcc--ceEEecCC------CC-------ceeEEEEEE---------cCCCCEEEEEeCCCcEEEEeCCCCeEE
Q 037288 401 LYDHRLTTRG--AVQSYEGH------VN-------SHTRIQLGV---------DQSERFVMSGGEDCKLRIWSIRSGELV 456 (513)
Q Consensus 401 lwd~~~~~~~--~~~~~~~h------~~-------~v~~~~~~~---------s~~g~~l~sg~~Dg~v~vwd~~~~~~~ 456 (513)
.+|+...... ....+.+. .+ ......+++ +++|.+.++-...+.|+.++. +|...
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~ 377 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT 377 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE
Confidence 9886421111 11222221 00 001233777 677777777777889999985 66544
Q ss_pred EEecCC-----------------CCCeEEEEEc-CCCceEEeeCCC
Q 037288 457 FEDKFS-----------------NSVPSAVCWR-TQRSMGPQIEGK 484 (513)
Q Consensus 457 ~~~~~~-----------------~~~v~~v~~~-p~~~~~~t~~~~ 484 (513)
...... -.....|++. +++.++++....
T Consensus 378 t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n 423 (433)
T 4hw6_A 378 TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDN 423 (433)
T ss_dssp EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCC
Confidence 332110 1236789999 667777766543
No 277
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.60 E-value=0.6 Score=45.56 Aligned_cols=229 Identities=8% Similarity=0.070 Sum_probs=120.1
Q ss_pred cEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEE
Q 037288 225 SIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQV 304 (513)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~ 304 (513)
.+.+.++.++....+ .|+.. -+.-.+|..+.+|.-+..++.|+|+++...+..+....+|.-=.|
T Consensus 49 ~vvIiDl~~~~~~~r-rpi~A--------------dsAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkW 113 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIR-RPISA--------------DSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKW 113 (494)
T ss_dssp EEEEEETTSTTSCEE-EECCC--------------SEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEE
T ss_pred eEEEEECCCCCccee-ccccc--------------ceeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEe
Confidence 677778777665422 22222 234467888888877777899999999998888887777766677
Q ss_pred ecCCcEEEEEeCCCeEEEEECCCCccccccccccccC----cCeEEEeeCC----eEEEeEeecccCcccceeEeecCC-
Q 037288 305 IHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHR----IPYSRLQRND----RVTNEQWFELKANIWPSHTTFMPS- 375 (513)
Q Consensus 305 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~----~~v~~v~~~~----~~~s~~w~~~~~~~~~~~~~~~~~- 375 (513)
-.+..+ +-- .+..|+-|++.... .+ .+.+..|. ..|..-..++ .++.|- ....+.......++--+
T Consensus 114 is~~~l-~lV-T~taVyHWsi~~~s-~P-~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI-~~~~~~v~G~mQLYS~er 188 (494)
T 1bpo_A 114 ISLNTV-ALV-TDNAVYHWSMEGES-QP-VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI-SAQQNRVVGAMQLYSVDR 188 (494)
T ss_dssp EETTEE-EEE-CSSEEEEEESSSSC-CC-EEEEECCGGGTTCEEEEEEECTTSSEEEEEEE-EEETTEEEEEEEEEESTT
T ss_pred cCCCeE-EEE-cCCeeEEecccCCC-Cc-hhheecchhcccceEEEEEECCCCCeEEEEee-cccCCcccceEEEeeccc
Confidence 654443 333 35789999997532 22 34444442 2232222222 111221 11111111111111111
Q ss_pred CceEE-----EEEcC---CC-----CEEEEEecC---CeEEEEecCCC-Ccc-c--eEEec-----CCCCceeEEEEEEc
Q 037288 376 SISCL-----QSLQL---YD-----QYFLASSMD---GTVKLYDHRLT-TRG-A--VQSYE-----GHVNSHTRIQLGVD 430 (513)
Q Consensus 376 ~v~~~-----~~~~~---~~-----~~l~s~s~d---g~i~lwd~~~~-~~~-~--~~~~~-----~h~~~v~~~~~~~s 430 (513)
.+.-. .+|.. +| +.|+.+... +.++|.++... ... + .+... ...+. ..+.+.++
T Consensus 189 ~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~D-FPvamqvs 267 (494)
T 1bpo_A 189 KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND-FPVAMQIS 267 (494)
T ss_dssp CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTC-CEEEEEEE
T ss_pred cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccC-ceeEEEec
Confidence 11110 01110 00 022222221 55666665421 000 0 01110 01111 11345667
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC
Q 037288 431 QSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ 474 (513)
Q Consensus 431 ~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~ 474 (513)
+.-..++.-..-|.|++||+.++.++..-+-...+|-..+....
T Consensus 268 ~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~ 311 (494)
T 1bpo_A 268 EKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA 311 (494)
T ss_dssp TTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT
T ss_pred ccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCC
Confidence 77778888888999999999999999987766666666555544
No 278
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.51 E-value=0.22 Score=51.42 Aligned_cols=20 Identities=20% Similarity=0.350 Sum_probs=17.0
Q ss_pred CCeEEEEECCCCcEEEEeee
Q 037288 276 NLGAAMVDMETGMASWVCRS 295 (513)
Q Consensus 276 ~~~i~vwd~~~~~~~~~~~~ 295 (513)
++.|..+|..+|+.++.+..
T Consensus 175 ~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 175 RGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp CCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEECCCCcEEEEEcc
Confidence 56799999999999988764
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.51 E-value=0.43 Score=51.11 Aligned_cols=175 Identities=9% Similarity=0.023 Sum_probs=100.9
Q ss_pred EEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCc-EEEEEeCCCeEEEEECCCCcccccccc-ccccCcCeEEE
Q 037288 270 QAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGN-VVLCGFRNGAIVTVDVRKRQRGCSSRA-GRRHRIPYSRL 347 (513)
Q Consensus 270 ~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v 347 (513)
+|+.+....|+..++.......+......+.+|+|++.+. ++++-...+.|+.+++........... +....
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l------ 470 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI------ 470 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC------
T ss_pred ccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC------
Confidence 5555555668888888776655566666788999998554 455555568898888875321000000 00000
Q ss_pred eeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCC-CEEEEEecCCeEEEEecCCCCccceEEec-CCCCceeEE
Q 037288 348 QRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYD-QYFLASSMDGTVKLYDHRLTTRGAVQSYE-GHVNSHTRI 425 (513)
Q Consensus 348 ~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~s~dg~i~lwd~~~~~~~~~~~~~-~h~~~v~~~ 425 (513)
..... +++.+.+ +++++-...+.|.+.++. .....++. ...... .
T Consensus 471 ---------------------------~~P~G-LAvD~~~~~LY~tD~~~~~I~v~~ld---G~~~~~l~~~~l~~P--~ 517 (791)
T 3m0c_C 471 ---------------------------QAPDG-LAVDWIHSNIYWTDSVLGTVSVADTK---GVKRKTLFRENGSKP--R 517 (791)
T ss_dssp ---------------------------SCCCE-EEEETTTTEEEEEETTTTEEEEEETT---SSSEEEEEECTTCCE--E
T ss_pred ---------------------------CCcce-eeeeecCCcEEEEecCCCeEEEEeCC---CCeEEEEEeCCCCCc--c
Confidence 11122 2455455 445555567889999985 33333332 222223 3
Q ss_pred EEEEcCCCCEEEEEeC--CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC-CceEEeeCC
Q 037288 426 QLGVDQSERFVMSGGE--DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ-RSMGPQIEG 483 (513)
Q Consensus 426 ~~~~s~~g~~l~sg~~--Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~~t~~~ 483 (513)
.++++|.+.+|+.... .+.|...++........+.......++|++.+. +.++.+...
T Consensus 518 gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 518 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 4888998666666543 367999998655544444444456899999966 666666543
No 280
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.26 E-value=0.19 Score=52.09 Aligned_cols=56 Identities=16% Similarity=0.080 Sum_probs=40.3
Q ss_pred CCeEEEEECCCCcEEEEeeeCCCe---------------------------------------EEEEEecCCcEEEEEeC
Q 037288 276 NLGAAMVDMETGMASWVCRSKSDI---------------------------------------LAQQVIHSGNVVLCGFR 316 (513)
Q Consensus 276 ~~~i~vwd~~~~~~~~~~~~~~~V---------------------------------------~~l~~~~~~~~l~sg~~ 316 (513)
++.|+.+|..+|+.++.+...... ...++.++..+|+.++.
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g 260 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCC
Confidence 567999999999999887643221 13456677778888876
Q ss_pred CC----------------eEEEEECCCCccc
Q 037288 317 NG----------------AIVTVDVRKRQRG 331 (513)
Q Consensus 317 dg----------------~i~iwd~~~~~~~ 331 (513)
++ .|..+|.++++..
T Consensus 261 ~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~ 291 (599)
T 1w6s_A 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAK 291 (599)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCEE
T ss_pred CCccccCcccCCCccccceEEEEeCCCCcee
Confidence 54 7888888877653
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.18 E-value=0.54 Score=42.68 Aligned_cols=70 Identities=4% Similarity=-0.002 Sum_probs=43.3
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCeEEEEECCCCcE---EEEee-------eCCCeEEEEEecCCcEEEEEeCCCeEEEEEC
Q 037288 257 CTVWTADFCTNPSQAVIG-TNLGAAMVDMETGMA---SWVCR-------SKSDILAQQVIHSGNVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~-s~~~i~vwd~~~~~~---~~~~~-------~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~ 325 (513)
...-.+++.+++.++++. .++.+.++++..... +.... .......|+|+|+++.|+++.......+|.+
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 456778888888766654 455688887765432 12221 2234689999999876666655544445544
Q ss_pred C
Q 037288 326 R 326 (513)
Q Consensus 326 ~ 326 (513)
.
T Consensus 150 ~ 150 (255)
T 3qqz_A 150 N 150 (255)
T ss_dssp E
T ss_pred c
Confidence 3
No 282
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.03 E-value=0.13 Score=54.30 Aligned_cols=179 Identities=12% Similarity=0.104 Sum_probs=92.9
Q ss_pred CCEEEEEeCCeEEEEECCCCcEEEEeeeCC-----CeEEEEEecCCcEEEEEeC------CCeEEEEECCCCcccccccc
Q 037288 268 PSQAVIGTNLGAAMVDMETGMASWVCRSKS-----DILAQQVIHSGNVVLCGFR------NGAIVTVDVRKRQRGCSSRA 336 (513)
Q Consensus 268 g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~-----~V~~l~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~ 336 (513)
+.+++.+.++.+..+|..+|+.++...... .+.+--.-.++ .++++.. +|.|..+|..+++.......
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 334444457779999999999998876421 11110011144 4555533 58999999999876431111
Q ss_pred ccccCcCeEEEeeCCeEEEe--EeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCC-----------------
Q 037288 337 GRRHRIPYSRLQRNDRVTNE--QWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDG----------------- 397 (513)
Q Consensus 337 ~~~h~~~v~~v~~~~~~~s~--~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg----------------- 397 (513)
..+....... .+.+..+ .|.- ...+. ......+.+...++++...++.++.++
T Consensus 197 ~~~~p~~~~~---~~~~~~~~~~~~g--~~~w~---~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~ 268 (668)
T 1kv9_A 197 VPGDPALPYE---HPELREAAKTWQG--DQYWK---LGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLY 268 (668)
T ss_dssp SCCCTTSCCS---SHHHHHHHTTCCS--SCHHH---HCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred cCCCCCcccc---ccccccccccCCc--cceee---eCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 1100000000 0000000 0000 00000 000011111246677778888887765
Q ss_pred --eEEEEecCCCCccceEEecC--CC-------CceeEEEEEEcCCCC---EEEEEeCCCcEEEEeCCCCeEEEEe
Q 037288 398 --TVKLYDHRLTTRGAVQSYEG--HV-------NSHTRIQLGVDQSER---FVMSGGEDCKLRIWSIRSGELVFED 459 (513)
Q Consensus 398 --~i~lwd~~~~~~~~~~~~~~--h~-------~~v~~~~~~~s~~g~---~l~sg~~Dg~v~vwd~~~~~~~~~~ 459 (513)
.|..+|.. +...+-.++. |. .+... ..+..+|+ .|+.++.+|.++++|..+|+++...
T Consensus 269 ~~~v~AlD~~--tG~~~W~~~~~~~~~wd~~~~~~~~~--~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 269 LSSILAIRPD--TGKLAWHYQVTPGDSWDFTATQQITL--AELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp TTEEEEECTT--TCCEEEEEESSTTCCSCCCCCSCEEE--EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred eeeEEEEcCC--CCceeeEeecCCCccccccCCCCcEE--EEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccc
Confidence 38889986 4444444432 32 22222 22334565 6889999999999999999998554
No 283
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.02 E-value=0.27 Score=48.71 Aligned_cols=143 Identities=5% Similarity=-0.058 Sum_probs=82.0
Q ss_pred CeEEEEEec-CCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCC
Q 037288 298 DILAQQVIH-SGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSS 376 (513)
Q Consensus 298 ~V~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~ 376 (513)
....|+++| ++..|+++...+.|+.+|+....... +.... ..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~----~~~~~---------------------------------~~ 180 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST----VYSGL---------------------------------SK 180 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE----EECCC---------------------------------SC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE----EecCC---------------------------------CC
Confidence 357888998 45556666555889999987654221 11111 11
Q ss_pred ceEEEEEcCCCCEEEEEec-CC----eEEEEecCCCCccc--eEEecCCCCceeEEEEEEcC-CCCEEEEEeCCCcEEEE
Q 037288 377 ISCLQSLQLYDQYFLASSM-DG----TVKLYDHRLTTRGA--VQSYEGHVNSHTRIQLGVDQ-SERFVMSGGEDCKLRIW 448 (513)
Q Consensus 377 v~~~~~~~~~~~~l~s~s~-dg----~i~lwd~~~~~~~~--~~~~~~h~~~v~~~~~~~s~-~g~~l~sg~~Dg~v~vw 448 (513)
... +++++++++|+++.. ++ .+..++. .... ...+..... ... ++++| +|.++++-..++.|+.+
T Consensus 181 P~~-ia~d~~G~~lyvad~~~~~~~~~v~~~~~---~g~~~~~~~l~~~~~-p~g--iavdp~~g~lyv~d~~~~~V~~~ 253 (430)
T 3tc9_A 181 VRT-ICWTHEADSMIITNDQNNNDRPNNYILTR---ESGFKVITELTKGQN-CNG--AETHPINGELYFNSWNAGQVFRY 253 (430)
T ss_dssp EEE-EEECTTSSEEEEEECCSCTTSEEEEEEEG---GGTSCSEEEEEECSS-CCC--EEECTTTCCEEEEETTTTEEEEE
T ss_pred cce-EEEeCCCCEEEEEeCCCCcccceEEEEeC---CCceeeeeeeccCCC-ceE--EEEeCCCCEEEEEECCCCEEEEE
Confidence 122 467788886665554 22 2333443 2211 122221111 122 67899 67766666678899999
Q ss_pred eCCCCeEEEEecC-CCCCeEEEEEcCCCc-eEEeeCCC
Q 037288 449 SIRSGELVFEDKF-SNSVPSAVCWRTQRS-MGPQIEGK 484 (513)
Q Consensus 449 d~~~~~~~~~~~~-~~~~v~~v~~~p~~~-~~~t~~~~ 484 (513)
+..++........ .....+.++|+|++. ++++....
T Consensus 254 ~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 254 DFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp ETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred ECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 9987765332222 234578999999965 66665443
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.96 E-value=1.2 Score=42.38 Aligned_cols=192 Identities=9% Similarity=0.117 Sum_probs=110.3
Q ss_pred CCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcC----CCCE--EE-EE--e--CCeEEEEEC--CCCc
Q 037288 222 TGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCT----NPSQ--AV-IG--T--NLGAAMVDM--ETGM 288 (513)
Q Consensus 222 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~----~g~~--l~-s~--s--~~~i~vwd~--~~~~ 288 (513)
..+.+.+|++. ...+ +.+.. +.++.++.-| .|+. ++ +. . +++|.+|++ .++.
T Consensus 48 k~~gL~Vydl~-G~~l------------~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 48 KKSGLVVYSLD-GKML------------HSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp TTTEEEEEETT-SCEE------------EEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred CCCCEEEEcCC-CcEE------------EEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 35678888884 2222 22221 4566666655 2322 33 22 2 356999966 4444
Q ss_pred EEEEee-------eC-CCeEEEEE--ecC-Cc-EEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEe
Q 037288 289 ASWVCR-------SK-SDILAQQV--IHS-GN-VVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNE 356 (513)
Q Consensus 289 ~~~~~~-------~~-~~V~~l~~--~~~-~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~ 356 (513)
+..+. .. ..+..+++ ++. +. ++++...+|.+..|++....... +.
T Consensus 113 -l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~-----------~~----------- 169 (355)
T 3amr_A 113 -LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY-----------IS----------- 169 (355)
T ss_dssp -EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC-----------EE-----------
T ss_pred -eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc-----------cc-----------
Confidence 33331 11 44666777 664 43 68888899999999985321110 00
Q ss_pred EeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCC---ccceEEec-CC-CCceeEEEEEEcC
Q 037288 357 QWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTT---RGAVQSYE-GH-VNSHTRIQLGVDQ 431 (513)
Q Consensus 357 ~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~---~~~~~~~~-~h-~~~v~~~~~~~s~ 431 (513)
....+.+...+.+..+ ...+....|.++-.+..|..+|.+... ...+..+. ++ ...+..+.+.-.+
T Consensus 170 --------~~lVR~f~lgsq~Egc-vvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~ 240 (355)
T 3amr_A 170 --------GKKVRAFKMNSQTEGM-AADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAA 240 (355)
T ss_dssp --------EEEEEEEECSSCEEEE-EEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECG
T ss_pred --------ceEEEEecCCCCcceE-EEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecC
Confidence 0123345555566654 556677888889988777777754211 11343332 22 2356675554466
Q ss_pred CCC-EEEEEe-CCCcEEEEeCC-CCeEEEEec
Q 037288 432 SER-FVMSGG-EDCKLRIWSIR-SGELVFEDK 460 (513)
Q Consensus 432 ~g~-~l~sg~-~Dg~v~vwd~~-~~~~~~~~~ 460 (513)
+++ +|++++ .+.+..+||.. +.+.+..+.
T Consensus 241 ~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 241 DGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp GGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 666 676666 57799999997 677777764
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.83 E-value=0.68 Score=47.77 Aligned_cols=20 Identities=35% Similarity=0.336 Sum_probs=16.6
Q ss_pred CCcEEEEeCCCCeEEEEecC
Q 037288 442 DCKLRIWSIRSGELVFEDKF 461 (513)
Q Consensus 442 Dg~v~vwd~~~~~~~~~~~~ 461 (513)
+|.|..||+.+++.+-....
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~ 484 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE 484 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE
T ss_pred cceEEEEECCCCCEEEEecC
Confidence 68899999999998877543
No 286
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.78 E-value=0.81 Score=42.38 Aligned_cols=184 Identities=13% Similarity=0.027 Sum_probs=90.2
Q ss_pred CCCEEEEEe-C------CeEEEEECCCCcEEEEeeeCCC--eEEEEEecCCcEEEEEeCC-----CeEEEEECCCCc---
Q 037288 267 NPSQAVIGT-N------LGAAMVDMETGMASWVCRSKSD--ILAQQVIHSGNVVLCGFRN-----GAIVTVDVRKRQ--- 329 (513)
Q Consensus 267 ~g~~l~s~s-~------~~i~vwd~~~~~~~~~~~~~~~--V~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~--- 329 (513)
++.+++.|+ . +.+.++|+.+++-...-....+ -.++ ...++.+++.|+.+ ..+.+||+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~-~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVAS-VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEE-EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccE-EEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 445555555 2 2478899887753332221111 1222 22367788888765 468999998876
Q ss_pred cccccccccccCcCeEEEeeCC-eEEEeE------------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC
Q 037288 330 RGCSSRAGRRHRIPYSRLQRND-RVTNEQ------------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD 396 (513)
Q Consensus 330 ~~~~~~~~~~h~~~v~~v~~~~-~~~s~~------------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d 396 (513)
... +..+.........+.... .++.|+ ++..............+..-.++..+ +++.++.|+.+
T Consensus 93 W~~-~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 169 (301)
T 2vpj_A 93 WYS-VAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYD 169 (301)
T ss_dssp CEE-ECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eEE-CCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCC
Confidence 433 333333333333333344 333343 23222221111111111111222222 67777777754
Q ss_pred -----CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEEE
Q 037288 397 -----GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED-----CKLRIWSIRSGELVFE 458 (513)
Q Consensus 397 -----g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-----g~v~vwd~~~~~~~~~ 458 (513)
..+.+||+.......+..+......... +. -++++++.|+.+ ..+.+||+.+.+-...
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~--~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 237 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGV--AL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV 237 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEE--EE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcccccceE--EE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC
Confidence 4588899863222222222111111111 22 256777788764 4689999988775443
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.73 E-value=1.2 Score=41.90 Aligned_cols=183 Identities=11% Similarity=-0.010 Sum_probs=92.8
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEE--eeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccccc
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWV--CRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSS 334 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~--~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 334 (513)
..+..+.+.+++..++++.++.|.. ..+.|+.-.. ......+.++.+.+++.+++.+...+..+-.|-....... +
T Consensus 122 ~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~-~ 199 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEP-H 199 (327)
T ss_dssp SCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEE-E
T ss_pred CCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeE-C
Confidence 4467777777777777776655422 2223432111 2244568999999998888776443333333321111111 0
Q ss_pred ccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEE
Q 037288 335 RAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQS 414 (513)
Q Consensus 335 ~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~ 414 (513)
. ... ...+.. +.+.+++..+ .++.+|.+.+.+.. ....-..
T Consensus 200 ~--~~~---------------------------------~~~~~~-~~~~~~g~~~-~~~~~G~~~~s~~D--~G~tW~~ 240 (327)
T 2xbg_A 200 N--RTT---------------------------------SRRLHN-MGFTPDGRLW-MIVNGGKIAFSDPD--NSENWGE 240 (327)
T ss_dssp E--CCS---------------------------------SSCEEE-EEECTTSCEE-EEETTTEEEEEETT--EEEEECC
T ss_pred C--CCC---------------------------------CCccce-eEECCCCCEE-EEeCCceEEEecCC--CCCeeEe
Confidence 0 011 112222 2455667655 44557877776321 0111111
Q ss_pred ec-C---CCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC---CCCCeEEEEEcCCCceEEeeCCC
Q 037288 415 YE-G---HVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF---SNSVPSAVCWRTQRSMGPQIEGK 484 (513)
Q Consensus 415 ~~-~---h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~---~~~~v~~v~~~p~~~~~~t~~~~ 484 (513)
+. . +...+ ..+.+.+++.+++++. +|.| ++....|+.-..+.. ....+..+.|.++..+++.....
T Consensus 241 ~~~~~~~~~~~~--~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G 313 (327)
T 2xbg_A 241 LLSPLRRNSVGF--LDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKG 313 (327)
T ss_dssp CBCTTSSCCSCE--EEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTT
T ss_pred ccCCcccCCcce--EEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCc
Confidence 11 1 11223 3477888777666554 7777 555565654444331 23457788887665555554443
No 288
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.72 E-value=0.15 Score=44.95 Aligned_cols=66 Identities=5% Similarity=-0.198 Sum_probs=44.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCeEEEEECCCCcE------EEEeeeC--CCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 258 TVWTADFCTNPSQAVIGTNLGAAMVDMETGMA------SWVCRSK--SDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~------~~~~~~~--~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
.+.+++|+|+|.+.++ .++.+.-.+..+... ...+... ..-.++.|.|+|.+.++ .||.|+-++.-
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 5669999999998888 777765555544211 1112111 11478999999998888 56999877753
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.37 E-value=0.035 Score=58.95 Aligned_cols=172 Identities=8% Similarity=0.015 Sum_probs=94.4
Q ss_pred EEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEE-eCCCeEEEEECCCC----ccccccccccccCcCeE
Q 037288 271 AVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCG-FRNGAIVTVDVRKR----QRGCSSRAGRRHRIPYS 345 (513)
Q Consensus 271 l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~----~~~~~~~~~~~h~~~v~ 345 (513)
|+.+....|+..++.+.....+......+..++|++.+..|+.+ ...+.|+.+++... .... .+.......
T Consensus 380 ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~---~i~~~~~~P- 455 (699)
T 1n7d_A 380 LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT---VISRDIQAP- 455 (699)
T ss_dssp BCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCC---BCCSCC--C-
T ss_pred EEecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEE---EEeCCCCCc-
Confidence 33344456888888877665555555567889999877666555 44678999998752 1110 000000000
Q ss_pred EEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEecCCeEEEEecCCCCccceEEec-CCCCcee
Q 037288 346 RLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSMDGTVKLYDHRLTTRGAVQSYE-GHVNSHT 423 (513)
Q Consensus 346 ~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~-~h~~~v~ 423 (513)
.. +++.+ .++++++-...+.|.++++. ...+..+. .......
T Consensus 456 --------------------------------~g-lavD~~~g~LY~tD~~~~~I~v~d~d---g~~~~~l~~~~~~~P~ 499 (699)
T 1n7d_A 456 --------------------------------DG-LAVDWIHSNIYWTDSVLGTVSVADTK---GVKRKTLFREQGSKPR 499 (699)
T ss_dssp --------------------------------CC-EECCCSSSBCEECCTTTSCEEEEBSS---SCCEEEECCCSSCCCC
T ss_pred --------------------------------ce-EEEEeeCCcEEEEeccCCeEEEEecC---CCceEEEEeCCCCCcc
Confidence 11 23442 34445554557789999874 33333332 1111222
Q ss_pred EEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC-CceEEeeCCC
Q 037288 424 RIQLGVDQSERFVMSGGE--DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ-RSMGPQIEGK 484 (513)
Q Consensus 424 ~~~~~~s~~g~~l~sg~~--Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~~t~~~~ 484 (513)
. ++++|.+.+|+.+.. .+.|..+++................+.|+|+|+ +.++++....
T Consensus 500 g--iavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~ 561 (699)
T 1n7d_A 500 A--IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 561 (699)
T ss_dssp C--EECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTT
T ss_pred e--EEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCC
Confidence 3 778887665555443 267888887543322222223345788999987 6666666543
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.26 E-value=2.4 Score=41.26 Aligned_cols=211 Identities=10% Similarity=-0.038 Sum_probs=112.5
Q ss_pred ccCcEEEEEEcCCCCEEE-EE-eCCeEEEEECCCC----cEEEEee-eCCCeEEEEEec-CCcEEEEEeCCCeEEEEECC
Q 037288 255 FKCTVWTADFCTNPSQAV-IG-TNLGAAMVDMETG----MASWVCR-SKSDILAQQVIH-SGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 255 h~~~V~~~~~s~~g~~l~-s~-s~~~i~vwd~~~~----~~~~~~~-~~~~V~~l~~~~-~~~~l~sg~~dg~i~iwd~~ 326 (513)
....+..++|++.+..|. +- .++.|..+++... ....... .-.....+++.+ .+++.++-...+.|.+.|+.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 446788999998655444 43 3456888888752 2223333 334578899987 45566666667899999987
Q ss_pred CCccccccccccccCcCeEEEeeCC---eEEEeEeecccCcc-------cceeEe-ecCCCceEEEEEcCCCCEEEEEe-
Q 037288 327 KRQRGCSSRAGRRHRIPYSRLQRND---RVTNEQWFELKANI-------WPSHTT-FMPSSISCLQSLQLYDQYFLASS- 394 (513)
Q Consensus 327 ~~~~~~~~~~~~~h~~~v~~v~~~~---~~~s~~w~~~~~~~-------~~~~~~-~~~~~v~~~~~~~~~~~~l~s~s- 394 (513)
...... .+.........|+++| .++-..|... +.+ .....+ ...-....-+++++++..|..+.
T Consensus 190 g~~~~~---l~~~~~~~P~~iavdp~~g~ly~td~~~~-~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 190 GVKRKT---LFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp TCSEEE---EEECSSCCEEEEEEETTTTEEEEEECSSS-CCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCceEE---EEeCCCCCcceEEEecccCeEEEEeCCCC-CEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEEC
Confidence 654322 1222334466777766 3333333210 000 001111 11111222347776666666554
Q ss_pred cCCeEEEEecCCCCccceEEe-cCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEE-Ec
Q 037288 395 MDGTVKLYDHRLTTRGAVQSY-EGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVC-WR 472 (513)
Q Consensus 395 ~dg~i~lwd~~~~~~~~~~~~-~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~-~~ 472 (513)
..+.|..+|+. ......+ ...........+++. ++.++++-...+.|..+|..+|+.+..+.........+. ++
T Consensus 266 ~~~~I~~~d~d---G~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~ 341 (400)
T 3p5b_L 266 KLHSISSIDVN---GGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFH 341 (400)
T ss_dssp TTTEEEEEETT---SCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEES
T ss_pred CCCEEEEEeCC---CCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEe
Confidence 46789999985 2322222 221111112235553 344555666678899999888877777654444344543 44
Q ss_pred C
Q 037288 473 T 473 (513)
Q Consensus 473 p 473 (513)
|
T Consensus 342 ~ 342 (400)
T 3p5b_L 342 N 342 (400)
T ss_dssp G
T ss_pred e
Confidence 4
No 291
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.16 E-value=1.2 Score=41.14 Aligned_cols=173 Identities=12% Similarity=0.018 Sum_probs=84.6
Q ss_pred eEEEEECCCCcEEEEeeeCCC--eEEEEEecCCcEEEEEeCC-----CeEEEEECCCCccccccccccccCcCeEEEeeC
Q 037288 278 GAAMVDMETGMASWVCRSKSD--ILAQQVIHSGNVVLCGFRN-----GAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRN 350 (513)
Q Consensus 278 ~i~vwd~~~~~~~~~~~~~~~--V~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 350 (513)
.+.++|+.+.+-...-....+ -.++. ..++.+++.|+.+ ..+.+||+.+.+... +..+.........+.+.
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~~ 108 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS-VANMRDRRSTLGAAVLN 108 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEET
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceee-CCCCCccccceEEEEEC
Confidence 478899887753332221111 12222 2367788888765 368899998876544 33343333333334444
Q ss_pred C-eEEEeE------------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC-------CeEEEEecCCCCcc
Q 037288 351 D-RVTNEQ------------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD-------GTVKLYDHRLTTRG 410 (513)
Q Consensus 351 ~-~~~s~~------------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d-------g~i~lwd~~~~~~~ 410 (513)
. .++.|+ ++..............+....++..+ +++.++.|+.+ ..+.+||+......
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 4 334443 23222221111111111111222222 56777777653 35888998632222
Q ss_pred ceEEecCCCCceeEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEEE
Q 037288 411 AVQSYEGHVNSHTRIQLGVDQSERFVMSGGED-----CKLRIWSIRSGELVFE 458 (513)
Q Consensus 411 ~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-----g~v~vwd~~~~~~~~~ 458 (513)
.+..+......... +. -++++++.||.+ ..+.+||+.+.+-...
T Consensus 187 ~~~~~p~~r~~~~~--~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 235 (302)
T 2xn4_A 187 YIAEMSTRRSGAGV--GV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV 235 (302)
T ss_dssp EECCCSSCCBSCEE--EE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEE
T ss_pred ECCCCccccccccE--EE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeC
Confidence 22222211111111 22 257777888765 3689999988765443
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.16 E-value=1 Score=42.42 Aligned_cols=150 Identities=9% Similarity=-0.067 Sum_probs=84.6
Q ss_pred eEEEEEecCCcEEEEEe-CCCeEEEEECCCCccccccccccc----cCcCeEEEeeCCeEEEeEeecccCcccceeEeec
Q 037288 299 ILAQQVIHSGNVVLCGF-RNGAIVTVDVRKRQRGCSSRAGRR----HRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFM 373 (513)
Q Consensus 299 V~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~ 373 (513)
-.+++|++....++.++ ..++|..||...+.... + .+.+ .....
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~-~-~~~~~s~~g~~~~----------------------------- 63 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFN-V-VIDGASSNGDGEQ----------------------------- 63 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEE-E-CCTTTCCSSCCSE-----------------------------
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEE-E-ecCCccccCCCcc-----------------------------
Confidence 46788988665555555 79999999997553222 1 1111 00000
Q ss_pred CCCceEEEEE---cCCCCEEEEEe-------------cCCeEEEEecC---CCCccceEEecCCC---------CceeEE
Q 037288 374 PSSISCLQSL---QLYDQYFLASS-------------MDGTVKLYDHR---LTTRGAVQSYEGHV---------NSHTRI 425 (513)
Q Consensus 374 ~~~v~~~~~~---~~~~~~l~s~s-------------~dg~i~lwd~~---~~~~~~~~~~~~h~---------~~v~~~ 425 (513)
.+.. +.+ .+++.++++.. .+..|..||+. ..+......+.... ..-...
T Consensus 64 --~~sG-l~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~n 140 (334)
T 2p9w_A 64 --QMSG-LSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVV 140 (334)
T ss_dssp --EEEE-EEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEE
T ss_pred --eeeE-EEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCc
Confidence 0122 234 56666766543 26789999985 21111122222111 111245
Q ss_pred EEEEcCCCCEEEEEeCC-CcEEEEeCCCCeEEEEec--C----CCCCeEEEEEcCCCceEEeeCC
Q 037288 426 QLGVDQSERFVMSGGED-CKLRIWSIRSGELVFEDK--F----SNSVPSAVCWRTQRSMGPQIEG 483 (513)
Q Consensus 426 ~~~~s~~g~~l~sg~~D-g~v~vwd~~~~~~~~~~~--~----~~~~v~~v~~~p~~~~~~t~~~ 483 (513)
.++++++|+..++++.- +.|...+.... .+..+. . ...-.+.++++|++..|+..+.
T Consensus 141 DvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 141 QSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp EEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred eeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 68999999999988888 88887776544 333321 1 1122679999999754444443
No 293
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.04 E-value=1.2 Score=41.48 Aligned_cols=183 Identities=10% Similarity=-0.008 Sum_probs=90.3
Q ss_pred CCCEEEEEeC-----CeEEEEECCCCcEEEEeeeCCC--eEEEEEecCCcEEEEEeC----C-----CeEEEEECCCCcc
Q 037288 267 NPSQAVIGTN-----LGAAMVDMETGMASWVCRSKSD--ILAQQVIHSGNVVLCGFR----N-----GAIVTVDVRKRQR 330 (513)
Q Consensus 267 ~g~~l~s~s~-----~~i~vwd~~~~~~~~~~~~~~~--V~~l~~~~~~~~l~sg~~----d-----g~i~iwd~~~~~~ 330 (513)
++.+++.|+. +.+.++|..+++-...-....+ -.++.. .++.+++.|+. + ..+.+||+.+.+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 5566666651 3488899988764332221111 122222 36777777776 2 4688999988765
Q ss_pred ccccccccccCcCeEEEeeCC-eEEEeE------------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC-
Q 037288 331 GCSSRAGRRHRIPYSRLQRND-RVTNEQ------------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD- 396 (513)
Q Consensus 331 ~~~~~~~~~h~~~v~~v~~~~-~~~s~~------------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d- 396 (513)
.. +..+.........+.+.. .++.|+ ++...........+..+..-.+...+ ++.+++.|+.+
T Consensus 103 ~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 179 (308)
T 1zgk_A 103 SP-CAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDG 179 (308)
T ss_dssp EE-CCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred eE-CCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCC
Confidence 43 333333333333344444 333333 22222221111111111111122222 67777777764
Q ss_pred ----CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEE
Q 037288 397 ----GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED-----CKLRIWSIRSGELVF 457 (513)
Q Consensus 397 ----g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-----g~v~vwd~~~~~~~~ 457 (513)
..+.+||+.......+..+......... +.+ ++++++.|+.+ ..+.+||+.+.+-..
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 245 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTIRSGAGV--CVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTF 245 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEE--EEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCccccceE--EEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEE
Confidence 4588899863222222222211111111 222 57777888765 569999998876543
No 294
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.01 E-value=0.39 Score=50.42 Aligned_cols=121 Identities=12% Similarity=-0.006 Sum_probs=72.0
Q ss_pred EEEEEec-CCcEEEEEeCCC-----------eEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccc
Q 037288 300 LAQQVIH-SGNVVLCGFRNG-----------AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWP 367 (513)
Q Consensus 300 ~~l~~~~-~~~~l~sg~~dg-----------~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~ 367 (513)
.+.++.+ ++++++.|+.+. .+.+||+.+.+... +..+...
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~-~~~~~~~--------------------------- 240 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD-RTVTVTK--------------------------- 240 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC-CEEEECS---------------------------
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe-CcccCCC---------------------------
Confidence 3566777 889999887653 57888888776433 1111000
Q ss_pred eeEeecCCCceEEEEEcCCCCEEEEEec-CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEe-CC---
Q 037288 368 SHTTFMPSSISCLQSLQLYDQYFLASSM-DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGG-ED--- 442 (513)
Q Consensus 368 ~~~~~~~~~v~~~~~~~~~~~~l~s~s~-dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~-~D--- 442 (513)
....++...+..++++++.|+. +..+.+||........+..+...... ..+++.++|++++.|| .+
T Consensus 241 ------~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~---~s~~~~~dg~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 241 ------HDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGY---QSSATMSDGRVFTIGGSWSGGV 311 (656)
T ss_dssp ------CCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSS---CEEEECTTSCEEEECCCCCSSS
T ss_pred ------CCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccc---cceEEecCCeEEEEeCcccCCc
Confidence 0111111244568899999884 56899999863222222222211111 2245557899999998 44
Q ss_pred --CcEEEEeCCCCeEEE
Q 037288 443 --CKLRIWSIRSGELVF 457 (513)
Q Consensus 443 --g~v~vwd~~~~~~~~ 457 (513)
..+.+||..+.+...
T Consensus 312 ~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 312 FEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp CCCCEEEEETTTTEEEE
T ss_pred ccccceEeCCCCCccee
Confidence 579999998876443
No 295
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.92 E-value=2.5 Score=39.59 Aligned_cols=183 Identities=8% Similarity=-0.084 Sum_probs=98.7
Q ss_pred CcEEEEEEcCCCCEEE-EEe-CCeEEEEECCC----CcEEEEee-eCCCeEEEEEecCC-cEEEEEeCCCeEEEEECCCC
Q 037288 257 CTVWTADFCTNPSQAV-IGT-NLGAAMVDMET----GMASWVCR-SKSDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKR 328 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~-s~s-~~~i~vwd~~~----~~~~~~~~-~~~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~ 328 (513)
.....++|++.+..|. +-. ++.|..+++.+ ......+. .-.....+++.+.+ ++.++-..++.|.++|+...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 4678999998665444 443 45698899876 22222232 22346788998754 55555566789999998754
Q ss_pred ccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEec-C-CeEEEEecCC
Q 037288 329 QRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM-D-GTVKLYDHRL 406 (513)
Q Consensus 329 ~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~-d-g~i~lwd~~~ 406 (513)
.... + +... ...... ++++|.+..|..+.. . +.|..+++.
T Consensus 110 ~~~~-~--~~~~---------------------------------~~~P~~-iavdp~~g~ly~~d~~~~~~I~~~~~d- 151 (316)
T 1ijq_A 110 KRKT-L--FREN---------------------------------GSKPRA-IVVDPVHGFMYWTDWGTPAKIKKGGLN- 151 (316)
T ss_dssp SEEE-E--EECT---------------------------------TCCEEE-EEEETTTTEEEEEECSSSCEEEEEETT-
T ss_pred ceEE-E--EECC---------------------------------CCCcce-EEeCCCCCEEEEEccCCCCeEEEEcCC-
Confidence 3211 0 0000 011222 355665554444443 3 678888874
Q ss_pred CCccceEEec-CCCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEec--CCCCCeEEEEEcCCCceEEeeC
Q 037288 407 TTRGAVQSYE-GHVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGELVFEDK--FSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 407 ~~~~~~~~~~-~h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
......+. ..-... ..++++++++.|+.+. ..+.|..+|+.......... .......++++.. +.++.+..
T Consensus 152 --G~~~~~~~~~~~~~P--~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~~ly~~d~ 226 (316)
T 1ijq_A 152 --GVDIYSLVTENIQWP--NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDI 226 (316)
T ss_dssp --SCCEEEEECSSCSCE--EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEET
T ss_pred --CCCeEEEEECCCCCc--eEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-CEEEEEEC
Confidence 33333332 112222 3388898877665554 56789999987533222222 1223466777754 45555543
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.89 E-value=2.6 Score=39.61 Aligned_cols=179 Identities=7% Similarity=-0.117 Sum_probs=97.6
Q ss_pred CcEEEEEEcCCCC-EEEEE-eCCeEEEEECCCCcE-EEEee-eCCCeEEEEEecC-CcEEEEEeCCCeEEEEECCCCccc
Q 037288 257 CTVWTADFCTNPS-QAVIG-TNLGAAMVDMETGMA-SWVCR-SKSDILAQQVIHS-GNVVLCGFRNGAIVTVDVRKRQRG 331 (513)
Q Consensus 257 ~~V~~~~~s~~g~-~l~s~-s~~~i~vwd~~~~~~-~~~~~-~~~~V~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~ 331 (513)
..+.+++|++.+. ++.+- ..+.|..+++..+.. ..... .-.....+++.+. ++++++-...+.|.++++......
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 3567899998544 44444 345688899876632 12222 2234678888874 455566566789999998754321
Q ss_pred cccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe--cCCeEEEEecCCCCc
Q 037288 332 CSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS--MDGTVKLYDHRLTTR 409 (513)
Q Consensus 332 ~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s--~dg~i~lwd~~~~~~ 409 (513)
. + +......... +++.|.+..|..+. ..+.|...++. .
T Consensus 115 ~-l--~~~~~~~P~g----------------------------------iavdp~~g~ly~td~~~~~~I~r~~~d---G 154 (318)
T 3sov_A 115 V-L--FWQELDQPRA----------------------------------IALDPSSGFMYWTDWGEVPKIERAGMD---G 154 (318)
T ss_dssp E-E--ECSSCSSEEE----------------------------------EEEEGGGTEEEEEECSSSCEEEEEETT---S
T ss_pred E-E--EeCCCCCccE----------------------------------EEEeCCCCEEEEEecCCCCEEEEEEcC---C
Confidence 1 0 0011111122 24555444444444 25778888774 2
Q ss_pred cceEEe-cCCCCceeEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCce
Q 037288 410 GAVQSY-EGHVNSHTRIQLGVDQSERFVMSG-GEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSM 477 (513)
Q Consensus 410 ~~~~~~-~~h~~~v~~~~~~~s~~g~~l~sg-~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 477 (513)
.....+ ...-.. ...++++++++.|+.+ ...+.|..+|+.................++++..+..+
T Consensus 155 ~~~~~~~~~~l~~--Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~ly 222 (318)
T 3sov_A 155 SSRFIIINSEIYW--PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILY 222 (318)
T ss_dssp CSCEEEECSSCSC--EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEE
T ss_pred CCeEEEEECCCCC--ccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEE
Confidence 222233 211112 2348899876666555 45678999998654332222323445667777644333
No 297
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.72 E-value=1.6 Score=40.45 Aligned_cols=182 Identities=10% Similarity=0.033 Sum_probs=88.9
Q ss_pred CCCEEEEEeC------CeEEEEECCCCcEEEEeeeCC--CeEEEEEecCCcEEEEEeCCC-----eEEEEECCCCccccc
Q 037288 267 NPSQAVIGTN------LGAAMVDMETGMASWVCRSKS--DILAQQVIHSGNVVLCGFRNG-----AIVTVDVRKRQRGCS 333 (513)
Q Consensus 267 ~g~~l~s~s~------~~i~vwd~~~~~~~~~~~~~~--~V~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~ 333 (513)
++.+++.|+. +.+.+||..+.+-...-.... .-.++.. .++.+++.|+.++ .+.+||+.+.+...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~- 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH- 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE-
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEee-
Confidence 5666666542 237889988776333322111 1122222 3678888887663 68889998776543
Q ss_pred cccccccCcCeEEEeeCC-eEEEeEee--------------cccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC--
Q 037288 334 SRAGRRHRIPYSRLQRND-RVTNEQWF--------------ELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD-- 396 (513)
Q Consensus 334 ~~~~~~h~~~v~~v~~~~-~~~s~~w~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d-- 396 (513)
+..+.........+.+.. .++.|+++ ..............+....++..+ ++.+++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 216 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGP 216 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSS
T ss_pred cCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCC
Confidence 333333333333333444 33334322 221111111011111111222222 67788888764
Q ss_pred ---CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCeEE
Q 037288 397 ---GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDC-----KLRIWSIRSGELV 456 (513)
Q Consensus 397 ---g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg-----~v~vwd~~~~~~~ 456 (513)
..+.+||+.......+..+......... +. .++++++.|+.++ .|.+||+.+.+-.
T Consensus 217 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~--~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 217 LVRKSVEVYDPTTNAWRQVADMNMCRRNAGV--CA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSSCCBSCEE--EE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred cccceEEEEeCCCCCEeeCCCCCCccccCeE--EE--ECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 3688999863222222222111111111 22 2577778887654 4889998877643
No 298
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.66 E-value=2.7 Score=38.83 Aligned_cols=181 Identities=10% Similarity=0.020 Sum_probs=89.8
Q ss_pred CCCEEEEEeC-----CeEEEEECCCCcEEEEeeeCCC--eEEEEEecCCcEEEEEeCC------CeEEEEECCCCccccc
Q 037288 267 NPSQAVIGTN-----LGAAMVDMETGMASWVCRSKSD--ILAQQVIHSGNVVLCGFRN------GAIVTVDVRKRQRGCS 333 (513)
Q Consensus 267 ~g~~l~s~s~-----~~i~vwd~~~~~~~~~~~~~~~--V~~l~~~~~~~~l~sg~~d------g~i~iwd~~~~~~~~~ 333 (513)
++.+++.|+. +.+.++|+.+++-...-....+ -.++. .-++.+++.|+.+ ..+.+||+.+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~- 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT- 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE-
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe-
Confidence 5666666652 3488899988764333221111 11222 2367888888765 568999998876543
Q ss_pred cccccccCcCeEEEeeCC-eEEEeEee----------------cccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC
Q 037288 334 SRAGRRHRIPYSRLQRND-RVTNEQWF----------------ELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD 396 (513)
Q Consensus 334 ~~~~~~h~~~v~~v~~~~-~~~s~~w~----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d 396 (513)
+..+.........+.+.. .++.|+.+ ..............+..-.++..+ ++++++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEE
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCC
Confidence 333333333333333444 33344322 221111111001111111122222 56777777654
Q ss_pred -----CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeE
Q 037288 397 -----GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED-----CKLRIWSIRSGEL 455 (513)
Q Consensus 397 -----g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-----g~v~vwd~~~~~~ 455 (513)
..+.+||+.......+..+......... +.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 211 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC--AAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp TTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE--EEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred CCCCCceEEEeeCCCCcEEECCCCCCCccceeE--EEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 3588899863222222222211111111 222 57788888854 4688999988653
No 299
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.59 E-value=2 Score=42.99 Aligned_cols=159 Identities=8% Similarity=-0.004 Sum_probs=87.4
Q ss_pred cEEEEEEcC-CCCEEEEE-eC-CeEEEEECCCCcEEEEeeeC----CCeEEEEE-------ecCCcEEEEEeCCC-----
Q 037288 258 TVWTADFCT-NPSQAVIG-TN-LGAAMVDMETGMASWVCRSK----SDILAQQV-------IHSGNVVLCGFRNG----- 318 (513)
Q Consensus 258 ~V~~~~~s~-~g~~l~s~-s~-~~i~vwd~~~~~~~~~~~~~----~~V~~l~~-------~~~~~~l~sg~~dg----- 318 (513)
....++|.| +...|..+ .. ..|++.|+.++....+.... .....++| +++|..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 567899998 34444444 33 34899999988776655432 24799999 99998666665543
Q ss_pred --eEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcC-CCCEEEEEec
Q 037288 319 --AIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQL-YDQYFLASSM 395 (513)
Q Consensus 319 --~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~s~ 395 (513)
.|.+++........ ..... . . .....++ .. +.++| ++.++++-..
T Consensus 220 ~~~V~~i~r~~~G~~~--~~~~~--~-~-----------------------v~~~~~p---~g-iavdp~~g~LYvtd~~ 267 (496)
T 3kya_A 220 SPSVYIIKRNADGTFD--DRSDI--Q-L-----------------------IAAYKQC---NG-ATIHPINGELYFNSYE 267 (496)
T ss_dssp EEEEEEEECCTTSCCS--TTSCE--E-E-----------------------EEEESCC---CC-EEECTTTCCEEEEETT
T ss_pred CceEEEEecCCCCcee--ecccc--e-e-----------------------eccCCCc---eE-EEEcCCCCeEEEEECC
Confidence 26666633311100 00000 0 0 0011111 12 25567 4555666667
Q ss_pred CCeEEEEecC-------CCCc-c---c-----eEE-ecC-CCCceeEEEEEEcCCCCEEEE-EeCCCcEEEEeC
Q 037288 396 DGTVKLYDHR-------LTTR-G---A-----VQS-YEG-HVNSHTRIQLGVDQSERFVMS-GGEDCKLRIWSI 450 (513)
Q Consensus 396 dg~i~lwd~~-------~~~~-~---~-----~~~-~~~-h~~~v~~~~~~~s~~g~~l~s-g~~Dg~v~vwd~ 450 (513)
++.|..+|+. .... . + ... +.. ..... ..++|+|+|++|+. =.....|+.++.
T Consensus 268 ~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p--~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 268 KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWE--FQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCC--EEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEecccccccccCceeecccccccccccceeEecCCCCCc--eEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 8889999985 1111 0 0 112 211 11222 34899999996544 455678888654
No 300
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.99 E-value=1.1 Score=41.62 Aligned_cols=171 Identities=13% Similarity=0.065 Sum_probs=81.9
Q ss_pred eEEEEECCCCcEEEEeeeCC--CeEEEEEecCCcEEEEEeCC-----CeEEEEECCCCccccccccccccCcCeEEEeeC
Q 037288 278 GAAMVDMETGMASWVCRSKS--DILAQQVIHSGNVVLCGFRN-----GAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRN 350 (513)
Q Consensus 278 ~i~vwd~~~~~~~~~~~~~~--~V~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 350 (513)
.+.++|+.+.+-...-.... .-.++.. -++.+++.|+.+ ..+.+||+.+.+... +..+.........+.+.
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~ 168 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHL-VAPMLTRRIGVGVAVLN 168 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEE-CCCCSSCCBSCEEEEET
T ss_pred eEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeE-CCCCCccccceEEEEEC
Confidence 47788988775332221111 1112222 267788887654 468899998776543 33333333333333344
Q ss_pred C-eEEEeE------------eecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC-----CeEEEEecCCCCccce
Q 037288 351 D-RVTNEQ------------WFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD-----GTVKLYDHRLTTRGAV 412 (513)
Q Consensus 351 ~-~~~s~~------------w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d-----g~i~lwd~~~~~~~~~ 412 (513)
. .++.|+ ++..............+....++..+ ++.+++.|+.+ ..+.+||+.......+
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 246 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFV 246 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence 4 333333 22222211111111111111222223 67778888765 4688999863222222
Q ss_pred EEecCCCCceeEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEE
Q 037288 413 QSYEGHVNSHTRIQLGVDQSERFVMSGGED-----CKLRIWSIRSGELV 456 (513)
Q Consensus 413 ~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-----g~v~vwd~~~~~~~ 456 (513)
..+........ +.. -++++++.|+.+ ..+.+||+.+.+-.
T Consensus 247 ~~~p~~r~~~~---~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 247 APMKHRRSALG---ITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp CCCSSCCBSCE---EEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCCCCCccceE---EEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 22221111111 222 257777888754 35788888776543
No 301
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.92 E-value=1.1 Score=41.35 Aligned_cols=147 Identities=15% Similarity=0.078 Sum_probs=76.6
Q ss_pred CCCEEEEEe------CCeEEEEECCCCcEEEEeeeCCC--eEEEEEecCCcEEEEEeCC-----CeEEEEECCCCccccc
Q 037288 267 NPSQAVIGT------NLGAAMVDMETGMASWVCRSKSD--ILAQQVIHSGNVVLCGFRN-----GAIVTVDVRKRQRGCS 333 (513)
Q Consensus 267 ~g~~l~s~s------~~~i~vwd~~~~~~~~~~~~~~~--V~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~ 333 (513)
++.+++.|+ .+.+.++|+.+.+-...-....+ -.++.. .++.+++.|+.+ ..+.+||+.+.....
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~- 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN- 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEE-
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEe-
Confidence 566666664 23488899988763332221111 122222 367888888765 457888887765432
Q ss_pred cccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC-----CeEEEEecCCCC
Q 037288 334 SRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD-----GTVKLYDHRLTT 408 (513)
Q Consensus 334 ~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d-----g~i~lwd~~~~~ 408 (513)
+..+.... ...++..+ +++.++.|+.+ ..+.+||+....
T Consensus 190 ~~~~p~~r----------------------------------~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 190 VTPMATKR----------------------------------SGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp ECCCSSCC----------------------------------BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCccc----------------------------------ccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 11111000 01111122 56777777764 468899986322
Q ss_pred ccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeE
Q 037288 409 RGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED-----CKLRIWSIRSGEL 455 (513)
Q Consensus 409 ~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-----g~v~vwd~~~~~~ 455 (513)
...+..+......... +. -++++++.|+.+ ..|.+||+.+.+-
T Consensus 234 W~~~~~~p~~r~~~~~--~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 234 WTTVTSMTTPRCYVGA--TV--LRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp EEEECCCSSCCBSCEE--EE--ETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred EEECCCCCCcccceeE--EE--ECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 2222222111111111 22 257777888765 3578888877653
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.88 E-value=0.28 Score=51.94 Aligned_cols=169 Identities=10% Similarity=-0.089 Sum_probs=90.5
Q ss_pred EEEEEEcCC-CCEEEEE-eCCeEEEEECCCCcEEEEeee-CCCeEEEEEecCCcEEEEEeC-C-CeEEEEECCCCccccc
Q 037288 259 VWTADFCTN-PSQAVIG-TNLGAAMVDMETGMASWVCRS-KSDILAQQVIHSGNVVLCGFR-N-GAIVTVDVRKRQRGCS 333 (513)
Q Consensus 259 V~~~~~s~~-g~~l~s~-s~~~i~vwd~~~~~~~~~~~~-~~~V~~l~~~~~~~~l~sg~~-d-g~i~iwd~~~~~~~~~ 333 (513)
...+++.+. +.++++- ..+.|.++++.......++.. ......|+++|.+..|+.+.. . +.|..+++.......
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~- 533 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS- 533 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE-
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE-
Confidence 456777753 4444433 345699999886655444432 234678888886654544432 2 677777665432211
Q ss_pred cccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCC-CEEEEEecCCeEEEEecCCCCccce
Q 037288 334 SRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYD-QYFLASSMDGTVKLYDHRLTTRGAV 412 (513)
Q Consensus 334 ~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~s~dg~i~lwd~~~~~~~~~ 412 (513)
+ +... +..+ .. +++++++ .++++-+..+.|..+|+. ....
T Consensus 534 l--~~~~------------------------------l~~P---nG-lavd~~~~~LY~aD~~~~~I~~~d~d---G~~~ 574 (699)
T 1n7d_A 534 L--VTEN------------------------------IQWP---NG-ITLDLLSGRLYWVDSKLHSISSIDVN---GGNR 574 (699)
T ss_dssp E--SCSS------------------------------CSSC---CC-EEECTTTCCEEEEETTTTEEEEECSS---SSCC
T ss_pred E--EeCC------------------------------CCCc---cE-EEEeccCCEEEEEecCCCeEEEEccC---CCce
Confidence 0 0000 0001 11 3566654 444555567789999985 2222
Q ss_pred EEecC---CCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEE
Q 037288 413 QSYEG---HVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVC 470 (513)
Q Consensus 413 ~~~~~---h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~ 470 (513)
..+.. ....... +++..+ .++++....+.|..++..+++.+..+......+..|+
T Consensus 575 ~~~~~~~~~~~~P~g--lavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~ 632 (699)
T 1n7d_A 575 KTILEDEKRLAHPFS--LAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 632 (699)
T ss_dssp EEECCCSSSCSSCCC--CEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCC
T ss_pred EEEEecCCcCCCceE--eEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEE
Confidence 22221 1111112 444443 4555556678999999989998887654333344444
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.88 E-value=2.6 Score=42.15 Aligned_cols=146 Identities=8% Similarity=-0.055 Sum_probs=79.4
Q ss_pred CeEEEEEecC-C-cEEEEEeCCCeEEEEECCCCcccccccccc-ccCcCeEEEeeCCeEEEeEeecccCcccceeEeecC
Q 037288 298 DILAQQVIHS-G-NVVLCGFRNGAIVTVDVRKRQRGCSSRAGR-RHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMP 374 (513)
Q Consensus 298 ~V~~l~~~~~-~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~ 374 (513)
....|+|+|. + +++++-...+.|++.|+..+.... +.... ........
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~-l~~~~~~~~~~p~~---------------------------- 190 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSS-PLNINTIPTNRIRS---------------------------- 190 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEE-EECCTTSSCSBEEE----------------------------
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEE-EEccCccccCCCcE----------------------------
Confidence 3678899983 4 555554445778889988765322 11100 00011222
Q ss_pred CCceEEEEE-------cCCCCEEEEEecCC-------eEEEEecCCCCccce-----EEecCCCCceeEEEEEEcCCC-C
Q 037288 375 SSISCLQSL-------QLYDQYFLASSMDG-------TVKLYDHRLTTRGAV-----QSYEGHVNSHTRIQLGVDQSE-R 434 (513)
Q Consensus 375 ~~v~~~~~~-------~~~~~~l~s~s~dg-------~i~lwd~~~~~~~~~-----~~~~~h~~~v~~~~~~~s~~g-~ 434 (513)
+++ +++++.|+++...+ .|.+++... ..... ..+.....+ ..++++|++ .
T Consensus 191 ------ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~-~G~~~~~~~~~~v~~~~~p---~giavdp~~g~ 260 (496)
T 3kya_A 191 ------IAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA-DGTFDDRSDIQLIAAYKQC---NGATIHPINGE 260 (496)
T ss_dssp ------EEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT-TSCCSTTSCEEEEEEESCC---CCEEECTTTCC
T ss_pred ------EEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC-CCceeecccceeeccCCCc---eEEEEcCCCCe
Confidence 355 77888666666543 266665321 01111 222211111 226778954 4
Q ss_pred EEEEEeCCCcEEEEeCC-------CCeE-----------EEE-ec-CCCCCeEEEEEcCCCc-eEEeeC
Q 037288 435 FVMSGGEDCKLRIWSIR-------SGEL-----------VFE-DK-FSNSVPSAVCWRTQRS-MGPQIE 482 (513)
Q Consensus 435 ~l~sg~~Dg~v~vwd~~-------~~~~-----------~~~-~~-~~~~~v~~v~~~p~~~-~~~t~~ 482 (513)
++++-..++.|..+|+. ++.. ... +. ........++|+|++. ++++..
T Consensus 261 LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~ 329 (496)
T 3kya_A 261 LYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI 329 (496)
T ss_dssp EEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC
Confidence 45566678889999997 5553 112 11 2234578999999975 566544
No 304
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.84 E-value=3.2 Score=36.52 Aligned_cols=176 Identities=9% Similarity=-0.033 Sum_probs=90.3
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCC
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSS 376 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~ 376 (513)
..+..++|+|+|.+.++ .+|.+.-.+..+..... ..+....|-... |. .
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~----W~~s~t~IG~~G---------w~----------------~ 89 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN----WMGRAKKIGNGG---------WN----------------Q 89 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC----HHHHCEEEECSC---------GG----------------G
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccc----ccccccEecccc---------cc----------------c
Confidence 35789999999987666 78887776654432211 000000000000 00 0
Q ss_pred ceEEEEEcCCCCEEEEEecCCeEEEEecCCCCcc-c--eEEecCC--CCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 037288 377 ISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRG-A--VQSYEGH--VNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIR 451 (513)
Q Consensus 377 v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~-~--~~~~~~h--~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~ 451 (513)
-. .+.+.++|.+.++ .||.|.-++-...... - ..+.-+. =..+. .+.|+|+|.+.+.. |+.++-+...
T Consensus 90 F~-a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~--~lff~p~G~Lyav~--dg~lyr~~~P 162 (236)
T 1tl2_A 90 FQ-FLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFK--FLFFHPNGYLYAVH--GQQFYKALPP 162 (236)
T ss_dssp CS-EEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEE--EEEECTTSCEEEEE--TTEEEEECCC
T ss_pred ce-EEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceE--EEEECCCceEEEEe--CCcEEecCCC
Confidence 11 1578889988887 5698888875311111 0 0111111 12333 38899999866555 8875443332
Q ss_pred CCe------EEEEec-CCCCCeEEEEEcCCCceEEeeCCCeeeeec-cCCcccc---eeeeee-ccceeee
Q 037288 452 SGE------LVFEDK-FSNSVPSAVCWRTQRSMGPQIEGKIHEEFD-LGQRHSW---EAWIGT-QEGLFRM 510 (513)
Q Consensus 452 ~~~------~~~~~~-~~~~~v~~v~~~p~~~~~~t~~~~~~~~~~-~~~~~~~---~~~~gs-~~g~~~~ 510 (513)
++. ....+. ..-...+-+.|.+++.+++..++.+.++.+ .....+| ...+|+ .=..||+
T Consensus 163 ~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~~g~~Y~~~~p~~~~~~~~~~a~~~g~~~~~~~~~ 233 (236)
T 1tl2_A 163 VSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQGGKFYEDYPPSYAYDNWLARAKLIGNGGWDDFRF 233 (236)
T ss_dssp SSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEEESSGGGEEE
T ss_pred CCCCcccccccceeccCCcceEEEEEECCCCcEEEEeCCeEEecCCccccCcchhhhccccccCccceEEE
Confidence 111 111111 222235567799998776666776665432 2222222 346676 4444443
No 305
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.61 E-value=4.5 Score=37.43 Aligned_cols=181 Identities=11% Similarity=-0.018 Sum_probs=93.4
Q ss_pred CcEEEEEEcCCCCEEEEEeC-Ce--EEEEECCCCcEEEEeeeC--CCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccc
Q 037288 257 CTVWTADFCTNPSQAVIGTN-LG--AAMVDMETGMASWVCRSK--SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRG 331 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~-~~--i~vwd~~~~~~~~~~~~~--~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 331 (513)
.....+++.++|+++++... +. |..+|..+++...+.... .....++..+++..+++-..++.|.++|...+...
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 46889999999997766533 33 666788888765444322 12344555555555555546899999998754210
Q ss_pred c-----ccc--cccccCcCeEEEeeCC-eEEEeE--------eeccc-CcccceeEeecCCCceEEEEEcCCCCEEEEEe
Q 037288 332 C-----SSR--AGRRHRIPYSRLQRND-RVTNEQ--------WFELK-ANIWPSHTTFMPSSISCLQSLQLYDQYFLASS 394 (513)
Q Consensus 332 ~-----~~~--~~~~h~~~v~~v~~~~-~~~s~~--------w~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s 394 (513)
. .+. .....-.....+.... .++... ++... +.......+........ ++++++|+++++..
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~g-i~vd~dG~l~va~~ 230 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDD-FAFDVEGNLYGATH 230 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSS-EEEBTTCCEEEECB
T ss_pred EEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCC-eEECCCCCEEEEeC
Confidence 0 000 0011111223332111 222221 33322 22211111111111222 36778998877777
Q ss_pred cCCeEEEEecCCCCccc--eEEecCCCCceeEEEEEEc---CCCCEEEEEeCCC
Q 037288 395 MDGTVKLYDHRLTTRGA--VQSYEGHVNSHTRIQLGVD---QSERFVMSGGEDC 443 (513)
Q Consensus 395 ~dg~i~lwd~~~~~~~~--~~~~~~h~~~v~~~~~~~s---~~g~~l~sg~~Dg 443 (513)
..+.|.++|.. ... +..+.......++ ++|. |+++.|+.+...+
T Consensus 231 ~~~~V~~~~~~---G~~~~~~~~~~~~~~p~~--~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 231 IYNSVVRIAPD---RSTTIIAQAEQGVIGSTA--VAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TTCCEEEECTT---CCEEEEECGGGTCTTEEE--EEECCSTTTTTEEEEEECTT
T ss_pred CCCeEEEECCC---CCEEEEeecccccCCceE--EEEecccCCCCEEEEECCCC
Confidence 78899999863 222 2223222233344 8888 8888777666543
No 306
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.48 E-value=3.7 Score=38.11 Aligned_cols=69 Identities=10% Similarity=0.119 Sum_probs=38.7
Q ss_pred CCCEEEEEec------CCeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCe
Q 037288 386 YDQYFLASSM------DGTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDC-----KLRIWSIRSGE 454 (513)
Q Consensus 386 ~~~~l~s~s~------dg~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg-----~v~vwd~~~~~ 454 (513)
+++.++.|+. -..+.+||+.......+..+......... +. -++++++.||.++ .+.+||+.+.+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGA--TV--HDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEE--EE--ETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEE--EE--ECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 5667777776 24688899863222222222211111111 22 2577888888765 58899998876
Q ss_pred EEEE
Q 037288 455 LVFE 458 (513)
Q Consensus 455 ~~~~ 458 (513)
-...
T Consensus 224 W~~~ 227 (315)
T 4asc_A 224 WAPF 227 (315)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5443
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.37 E-value=5.6 Score=37.82 Aligned_cols=70 Identities=11% Similarity=0.060 Sum_probs=47.1
Q ss_pred cCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee------eCCCeEEEEEecC---CcEEEEE-eCC-----CeE
Q 037288 256 KCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR------SKSDILAQQVIHS---GNVVLCG-FRN-----GAI 320 (513)
Q Consensus 256 ~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~------~~~~V~~l~~~~~---~~~l~sg-~~d-----g~i 320 (513)
-..-+.++|.|+|+++++-..+.|.+++ ++....... .......|+|+|+ +..|+.+ ..+ +.|
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 3456899999999988877777898888 444322211 2345899999998 4444443 332 678
Q ss_pred EEEECCC
Q 037288 321 VTVDVRK 327 (513)
Q Consensus 321 ~iwd~~~ 327 (513)
..++...
T Consensus 108 ~r~~~~~ 114 (352)
T 2ism_A 108 VRLRHLG 114 (352)
T ss_dssp EEEEECS
T ss_pred EEEEeCC
Confidence 8888764
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.36 E-value=1.6 Score=40.93 Aligned_cols=138 Identities=11% Similarity=0.150 Sum_probs=87.2
Q ss_pred eEEEEECCCCcEEEE--eeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEE
Q 037288 278 GAAMVDMETGMASWV--CRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTN 355 (513)
Q Consensus 278 ~i~vwd~~~~~~~~~--~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s 355 (513)
.|.|.|+..+..... +..++.| .+|..++||.=. ..++.++|+.+.....
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~AdsAI----MnP~~~ViALra-g~~LQiFnletK~klk----------------------- 101 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISADSAI----MNPASKVIALKA-GKTLQIFNIEMKSKMK----------------------- 101 (365)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEE----ECSSSSEEEEEE-TTEEEEEETTTTEEEE-----------------------
T ss_pred EEEEEECCCCCCccccccccceee----eCCCccEEEEec-CCeEEEechHHhhhhc-----------------------
Confidence 488899988654322 2233333 378888777665 6899999999887532
Q ss_pred eEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCC--ceeEEEEEEcCCC
Q 037288 356 EQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVN--SHTRIQLGVDQSE 433 (513)
Q Consensus 356 ~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~--~v~~~~~~~s~~g 433 (513)
....++.+.--.|+++ +.|+..+ +..|+-|++.. +..+++.|..|.. ....+....++++
T Consensus 102 --------------s~~~~e~VvfWkWis~--~~L~lVT-~taVyHWs~~~-~s~P~kvFdR~~~L~~~QIInY~~d~~~ 163 (365)
T 2xzh_A 102 --------------AHTMTDDVTFWKWISL--NTVALVT-DNAVYHWSMEG-ESQPVKMFDRHSSLAGCQIINYRTDAKQ 163 (365)
T ss_dssp --------------EEECSSCEEEEEECSS--SEEEEEE-SSEEEEEESST-TCCCEEEEECCGGGTTCEEEEEEECTTS
T ss_pred --------------ceecCCccEEEEecCC--CeEEEEc-CCcEEEEcccC-CCCCceeeecchhcccceEEEEEECCCC
Confidence 2223334444466664 4555555 34899999962 2348888877753 2334556778999
Q ss_pred CEEEEEeC-------CCcEEEEeCCCCeEEEEecCC
Q 037288 434 RFVMSGGE-------DCKLRIWSIRSGELVFEDKFS 462 (513)
Q Consensus 434 ~~l~sg~~-------Dg~v~vwd~~~~~~~~~~~~~ 462 (513)
+|++..|- .|.+.+|+.+.+. -+.+.+|
T Consensus 164 kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGh 198 (365)
T 2xzh_A 164 KWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGH 198 (365)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCS
T ss_pred CEEEEEeEeccCCccceeEEEEeecccc-cceeeee
Confidence 99875443 4788999986554 2334444
No 309
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.26 E-value=3 Score=41.34 Aligned_cols=32 Identities=16% Similarity=0.049 Sum_probs=22.4
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEECCCC
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKR 328 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 328 (513)
....+++|.|+|+++++-...+.|++++...+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g 58 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESG 58 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCC
Confidence 34678999999987766533347888876544
No 310
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.07 E-value=9.3 Score=39.52 Aligned_cols=182 Identities=8% Similarity=-0.100 Sum_probs=94.0
Q ss_pred CcEEEEEEcCCCCEEEEE--eCCeEEEEECCCCcE-EEEeeeC-CCeEEEEEecCC-cEEEEEeCCCeEEEEECCCCccc
Q 037288 257 CTVWTADFCTNPSQAVIG--TNLGAAMVDMETGMA-SWVCRSK-SDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRG 331 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~--s~~~i~vwd~~~~~~-~~~~~~~-~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~ 331 (513)
..+..++|++.+..|..+ .++.|..+++..... ..++... .....+++.+.+ +++.+-...+.|.+.++......
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 457899999866655544 345688888875532 2233322 458899999865 45555556789999998765321
Q ss_pred cccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEec--CCeEEEEecCCCCc
Q 037288 332 CSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM--DGTVKLYDHRLTTR 409 (513)
Q Consensus 332 ~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~--dg~i~lwd~~~~~~ 409 (513)
. + +...-... .. +++.|.+.+|..+.. .+.|...++. .
T Consensus 120 ~-l--~~~~l~~P---------------------------------~~-Iavdp~~g~ly~tD~g~~~~I~r~~~d---G 159 (619)
T 3s94_A 120 V-L--FWQELDQP---------------------------------RA-IALDPSSGFMYWTDWGEVPKIERAGMD---G 159 (619)
T ss_dssp E-E--ECSSCSCC---------------------------------CC-EEEETTTTEEEEEECSSSCEEEEEETT---S
T ss_pred E-E--EeCCCCCC---------------------------------ce-EEEecCCCeEEEeccCCCCEEEEEECC---C
Confidence 1 0 00110111 11 355555444444442 3566666663 2
Q ss_pred cceEEec-CCCCceeEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEee
Q 037288 410 GAVQSYE-GHVNSHTRIQLGVDQSERFVMSG-GEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQI 481 (513)
Q Consensus 410 ~~~~~~~-~h~~~v~~~~~~~s~~g~~l~sg-~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~ 481 (513)
.....+. ..-..... ++++++++.|+.+ ...+.|...|+.................++++..+ .++.+.
T Consensus 160 ~~~~~l~~~~~~~P~G--lald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td 230 (619)
T 3s94_A 160 SSRFIIINSEIYWPNG--LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTD 230 (619)
T ss_dssp CSCEEEECSSCSSEEE--EEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEEC
T ss_pred CceEEEEeCCCCCCcE--EEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEec
Confidence 2222222 12222233 7888876666554 45678999998654433222212222346666666 444444
No 311
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.06 E-value=13 Score=42.24 Aligned_cols=228 Identities=8% Similarity=0.083 Sum_probs=119.9
Q ss_pred cEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEE
Q 037288 225 SIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQV 304 (513)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~ 304 (513)
.+.+.++.++..+.+ .|+.. -+.-.+|..+.+|.-+..++.|+|+++...+..+....+|.-=.|
T Consensus 49 ~vvIidl~~~~~~~r-rpi~A--------------dsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkW 113 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIR-RPISA--------------DSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKW 113 (1630)
T ss_pred eEEEEECCCCCCccc-ccccc--------------hhhccCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEe
Confidence 677788877665522 22222 233457778888877777799999999887777776677766667
Q ss_pred ecCCcEEEEEeCCCeEEEEECCCCcccccccccccc----CcCeEEEeeCC----eEEEeEeecccCcccceeEeecCC-
Q 037288 305 IHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRH----RIPYSRLQRND----RVTNEQWFELKANIWPSHTTFMPS- 375 (513)
Q Consensus 305 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h----~~~v~~v~~~~----~~~s~~w~~~~~~~~~~~~~~~~~- 375 (513)
-.+..+-+++ +..|+-|++... ..+ .+.+..| ...|..-..++ .++.|- ....+.+.....+.-.+
T Consensus 114 is~~~l~lVT--~~aVyHW~~~~~-s~P-~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi-~~~~~~v~G~mQLyS~er 188 (1630)
T 1xi4_A 114 ISLNTVALVT--DNAVYHWSMEGE-SQP-VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI-SAQQNRVVGAMQLYSVDR 188 (1630)
T ss_pred cCCCeeEEEc--CCeEEEeccCCC-Ccc-HHHHhcchhcccCeeEEeeeCCCCCeEEEEee-ccCCCcccceeeeeeccc
Confidence 5444433332 578999999652 223 4455555 23333333333 122221 11111111111111000
Q ss_pred Cc--------eEEEEE-----cCCCCEEEEEec---CCeEEEEecCCC-Ccc-ce-----EEecCC--CCceeEEEEEEc
Q 037288 376 SI--------SCLQSL-----QLYDQYFLASSM---DGTVKLYDHRLT-TRG-AV-----QSYEGH--VNSHTRIQLGVD 430 (513)
Q Consensus 376 ~v--------~~~~~~-----~~~~~~l~s~s~---dg~i~lwd~~~~-~~~-~~-----~~~~~h--~~~v~~~~~~~s 430 (513)
.+ .+-..+ .+....|+.+.. .+.++|.++... ... +. ..+-.. .+. ..+.+.++
T Consensus 189 ~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~D-fpv~~~vs 267 (1630)
T 1xi4_A 189 KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND-FPVAMQIS 267 (1630)
T ss_pred ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccC-cceEEEec
Confidence 00 000000 111223333322 368899888632 111 11 111101 111 11335667
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcC
Q 037288 431 QSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRT 473 (513)
Q Consensus 431 ~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p 473 (513)
+.-..+..-..-|.|+++|+.++.++..-+-...+|-..+.+.
T Consensus 268 ~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~ 310 (1630)
T 1xi4_A 268 EKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE 310 (1630)
T ss_pred cccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCC
Confidence 7777888888899999999999998887655555555444443
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.03 E-value=4.9 Score=38.30 Aligned_cols=71 Identities=8% Similarity=0.024 Sum_probs=46.0
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCc-EEEEee----eCCCeEEEEEecC----CcEEEEEeC---C----CeE
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGM-ASWVCR----SKSDILAQQVIHS----GNVVLCGFR---N----GAI 320 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~-~~~~~~----~~~~V~~l~~~~~----~~~l~sg~~---d----g~i 320 (513)
..-+.++|.|+|+++++-.++.|+++|. +++ .+..+. .......|+|+|+ +.+.++-+. + ..|
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 4678999999999888877788988873 454 111111 2345899999997 444443332 3 567
Q ss_pred EEEECCCC
Q 037288 321 VTVDVRKR 328 (513)
Q Consensus 321 ~iwd~~~~ 328 (513)
..|+....
T Consensus 108 ~r~~~~~~ 115 (354)
T 3a9g_A 108 IRGRLDGS 115 (354)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 77776543
No 313
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.02 E-value=5.9 Score=37.14 Aligned_cols=229 Identities=8% Similarity=0.094 Sum_probs=127.5
Q ss_pred cEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEE
Q 037288 225 SIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQV 304 (513)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~ 304 (513)
.+.+.++.++....+ .|+... +.-.+|..+.+|.-+...+.++|+++.+.+..+....+|.-=.|
T Consensus 50 ~VvIiDl~n~~~~~R-rpi~Ad--------------sAIMnP~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkW 114 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIR-RPISAD--------------SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKW 114 (365)
T ss_dssp EEEEEETTSTTSCEE-EECCCS--------------EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EEEEEECCCCCCccc-cccccc--------------eeeeCCCccEEEEecCCeEEEechHHhhhhcceecCCccEEEEe
Confidence 566678777665422 222222 23348888888877777899999999998888887788877777
Q ss_pred ecCCcEEEEEeCCCeEEEEECCCCcccccccccccc----CcCeEEEeeCC----eEEEeEeecccCcccceeEeec---
Q 037288 305 IHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRH----RIPYSRLQRND----RVTNEQWFELKANIWPSHTTFM--- 373 (513)
Q Consensus 305 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h----~~~v~~v~~~~----~~~s~~w~~~~~~~~~~~~~~~--- 373 (513)
-.+..+-++. +..|+-|++.... .+ .+.+..| ...|..-..++ .++.|- ....+.......++-
T Consensus 115 is~~~L~lVT--~taVyHWs~~~~s-~P-~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI-~~~~~~v~G~mQLYS~er 189 (365)
T 2xzh_A 115 ISLNTVALVT--DNAVYHWSMEGES-QP-VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI-SAQQNRVVGAMQLYSVDR 189 (365)
T ss_dssp CSSSEEEEEE--SSEEEEEESSTTC-CC-EEEEECCGGGTTCEEEEEEECTTSCEEEEEEE-EEETTEEEEEEEEEETTT
T ss_pred cCCCeEEEEc--CCcEEEEcccCCC-CC-ceeeecchhcccceEEEEEECCCCCEEEEEeE-eccCCccceeEEEEeecc
Confidence 6544443333 5789999997532 22 3444444 22333333333 222221 111111111111111
Q ss_pred ------CCCceEEEEEcCCC-----CEEEEEec---CCeEEEEecCCC-Ccc-c--eE---EecC--CCCceeEEEEEEc
Q 037288 374 ------PSSISCLQSLQLYD-----QYFLASSM---DGTVKLYDHRLT-TRG-A--VQ---SYEG--HVNSHTRIQLGVD 430 (513)
Q Consensus 374 ------~~~v~~~~~~~~~~-----~~l~s~s~---dg~i~lwd~~~~-~~~-~--~~---~~~~--h~~~v~~~~~~~s 430 (513)
.+...+-..+..+| ++|+.+.. .+.+++.++... ... + .+ .+-. ..+. .-+.+.++
T Consensus 190 ~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~D-FPVamqvs 268 (365)
T 2xzh_A 190 KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND-FPVAMQIS 268 (365)
T ss_dssp TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTC-CEEEEEEE
T ss_pred cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCC-ceEEEEec
Confidence 11111111222222 23443333 258899988532 111 1 11 1111 1111 12446777
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC
Q 037288 431 QSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ 474 (513)
Q Consensus 431 ~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~ 474 (513)
+.-..++.-..-|.|++||+.++.++..-+-...+|-..+....
T Consensus 269 ~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~ 312 (365)
T 2xzh_A 269 EKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA 312 (365)
T ss_dssp TTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGG
T ss_pred ccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCC
Confidence 77778888899999999999999999987776666665555433
No 314
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.01 E-value=9.6 Score=39.51 Aligned_cols=172 Identities=9% Similarity=-0.044 Sum_probs=99.8
Q ss_pred CEEEEEeCCeEEEEECCCCcEEEEee--eCCCeEEEEEecCCcEEE-EEeCCCeEEEEECCCCccccccccccccCcCeE
Q 037288 269 SQAVIGTNLGAAMVDMETGMASWVCR--SKSDILAQQVIHSGNVVL-CGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYS 345 (513)
Q Consensus 269 ~~l~s~s~~~i~vwd~~~~~~~~~~~--~~~~V~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 345 (513)
.+|+.+....|+..|+.+......+. .-..+..|+|++.+..|+ +-..++.|..+++....... .+.....
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~---v~~~g~~--- 80 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEH---VVEFGLD--- 80 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---EECSSCS---
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEE---EEeCCCC---
Confidence 35666667779999998765433333 234688999998765555 44557899999887543211 0000000
Q ss_pred EEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCC-CCEEEEEecCCeEEEEecCCCCccceEEec-CCCCcee
Q 037288 346 RLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLY-DQYFLASSMDGTVKLYDHRLTTRGAVQSYE-GHVNSHT 423 (513)
Q Consensus 346 ~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~-~h~~~v~ 423 (513)
.... +++.+. ++++++-...+.|.+.++. ......+. ..-...
T Consensus 81 ------------------------------~P~G-lAvD~~~~~LY~tD~~~~~I~v~~~d---G~~~~~l~~~~l~~P- 125 (628)
T 4a0p_A 81 ------------------------------YPEG-MAVDWLGKNLYWADTGTNRIEVSKLD---GQHRQVLVWKDLDSP- 125 (628)
T ss_dssp ------------------------------CCCE-EEEETTTTEEEEEETTTTEEEEEETT---STTCEEEECSSCCCE-
T ss_pred ------------------------------Ccce-EEEEeCCCEEEEEECCCCEEEEEecC---CCcEEEEEeCCCCCc-
Confidence 1112 244444 4444555557889999884 33222222 222222
Q ss_pred EEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCC-CceEEeeCC
Q 037288 424 RIQLGVDQSERFVMSGGE--DCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQ-RSMGPQIEG 483 (513)
Q Consensus 424 ~~~~~~s~~g~~l~sg~~--Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~~t~~~ 483 (513)
..++++|...+|+.... .+.|...++......... ......+.+++.++ +.++.+...
T Consensus 126 -~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~ 186 (628)
T 4a0p_A 126 -RALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLD 186 (628)
T ss_dssp -EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTEEEEEETT
T ss_pred -ccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEccccCEEEEEECC
Confidence 44888987666665543 567888887655433323 34556889999986 556665543
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.89 E-value=2.4 Score=41.32 Aligned_cols=73 Identities=11% Similarity=0.070 Sum_probs=56.4
Q ss_pred cEEEEEEcCCCCEEEEEeCCeEEEEECCCCc------------EEEEee-------eCCCeEEEEEecCC---cEEEEEe
Q 037288 258 TVWTADFCTNPSQAVIGTNLGAAMVDMETGM------------ASWVCR-------SKSDILAQQVIHSG---NVVLCGF 315 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~------------~~~~~~-------~~~~V~~l~~~~~~---~~l~sg~ 315 (513)
.|..+..+|+|++||..++.+|.|-.+..+. ....+. ...+|..+.|||-+ ..|++-.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 5677999999999999999999888776321 122333 24679999999965 5888889
Q ss_pred CCCeEEEEECCCCcc
Q 037288 316 RNGAIVTVDVRKRQR 330 (513)
Q Consensus 316 ~dg~i~iwd~~~~~~ 330 (513)
.|++|++||+.....
T Consensus 147 sD~~Ir~yDl~~s~~ 161 (452)
T 3pbp_A 147 EDDTITMFDILNSQE 161 (452)
T ss_dssp TTSCEEEEETTCTTS
T ss_pred cCCEEEEEEcccCCC
Confidence 999999999987443
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.83 E-value=5.8 Score=36.52 Aligned_cols=181 Identities=9% Similarity=0.003 Sum_probs=87.3
Q ss_pred CEEEEEeC---CeEEEEECCCCcEEEEeeeCCC--eEEEEEecCCcEEEEEeCC----CeEEEEECCCCccccccccccc
Q 037288 269 SQAVIGTN---LGAAMVDMETGMASWVCRSKSD--ILAQQVIHSGNVVLCGFRN----GAIVTVDVRKRQRGCSSRAGRR 339 (513)
Q Consensus 269 ~~l~s~s~---~~i~vwd~~~~~~~~~~~~~~~--V~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~ 339 (513)
.+++.|+. +.+.+||..+++-...-....+ -.++. ..++.+++.|+.+ ..+.+||+.+.+... +..+..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~-~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACV-FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYS-KLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEE-EETTEEEEECCBSSSBCCEEEEEETTTTEEEE-EECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEE-EECCEEEEEeCCCCCCcceEEEEeCCCCeEEE-CCCCCc
Confidence 34455542 3588899988763332211111 11222 2367788888765 778999998876543 333333
Q ss_pred cCcCeEEEeeCC-eEEEeEee-------------cccCcccceeEeecCCCceEEEEEcCCCCEEEEEec---------C
Q 037288 340 HRIPYSRLQRND-RVTNEQWF-------------ELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSM---------D 396 (513)
Q Consensus 340 h~~~v~~v~~~~-~~~s~~w~-------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~---------d 396 (513)
.......+.+.. .++.|+++ ..............+..-.++.. .++++++.|+. -
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEEC
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCccccc
Confidence 333333334444 34444432 22211111000111111112222 25677777764 3
Q ss_pred CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEE
Q 037288 397 GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED-----CKLRIWSIRSGELVF 457 (513)
Q Consensus 397 g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D-----g~v~vwd~~~~~~~~ 457 (513)
..+.+||+.......+..+....... .+.. -++++++.||.+ ..+.+||+.+.+-..
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~---~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 230 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNH---GLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKM 230 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSC---EEEE-ETTEEEEECCEETTEEBCCEEEEETTTTEEEE
T ss_pred ceEEEeCCCCCeEEECCCccchhhcc---eEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEE
Confidence 45888998632222222221111111 1222 256777777754 368999998876443
No 317
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.59 E-value=13 Score=39.79 Aligned_cols=185 Identities=8% Similarity=-0.085 Sum_probs=99.5
Q ss_pred cccCcEEEEEEcCCCCEEE-EE-eCCeEEEEECCCC----cEEEEee-eCCCeEEEEEecCC-cEEEEEeCCCeEEEEEC
Q 037288 254 SFKCTVWTADFCTNPSQAV-IG-TNLGAAMVDMETG----MASWVCR-SKSDILAQQVIHSG-NVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 254 ~h~~~V~~~~~s~~g~~l~-s~-s~~~i~vwd~~~~----~~~~~~~-~~~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~ 325 (513)
.....+..++|.+....|. +- ..+.|+.+++... ....++. .-.....|++.+.+ +++++-...+.|.+.++
T Consensus 421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 3345678899988554444 44 3456888888753 2223333 33446788998877 45555556789999998
Q ss_pred CCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe-cC-CeEEEEe
Q 037288 326 RKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS-MD-GTVKLYD 403 (513)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s-~d-g~i~lwd 403 (513)
....... + +....... .. +++.+...+|..+. .+ +.|...+
T Consensus 501 dG~~~~~-l--~~~~l~~P---------------------------------~g-IaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 501 KGVKRKT-L--FRENGSKP---------------------------------RA-IVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp TSSSEEE-E--EECTTCCE---------------------------------EE-EEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CCCeEEE-E--EeCCCCCc---------------------------------ce-EEEecCCCCEEEecCCCCCeEEEEe
Confidence 7543211 0 00111111 22 35555544444444 22 6788888
Q ss_pred cCCCCccceEEe-cCCCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEecC--CCCCeEEEEEcCCCceEE
Q 037288 404 HRLTTRGAVQSY-EGHVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGELVFEDKF--SNSVPSAVCWRTQRSMGP 479 (513)
Q Consensus 404 ~~~~~~~~~~~~-~~h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~~ 479 (513)
+. ......+ ...-..... +++++.+..|+.+. ....|...++........+.. .-....+|+...+ .++.
T Consensus 544 ~d---G~~~~~lv~~~l~~P~G--LavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYw 617 (791)
T 3m0c_C 544 LN---GVDIYSLVTENIQWPNG--ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFW 617 (791)
T ss_dssp TT---SCCEEEEECSSCSCEEE--EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEE
T ss_pred cC---CCceEEEEeCCCCCceE--EEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEE
Confidence 74 3333333 222223333 78887776666554 456899999865544333332 1233557777555 4444
Q ss_pred ee
Q 037288 480 QI 481 (513)
Q Consensus 480 t~ 481 (513)
+.
T Consensus 618 tD 619 (791)
T 3m0c_C 618 TD 619 (791)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 318
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.54 E-value=6.3 Score=36.57 Aligned_cols=185 Identities=9% Similarity=-0.019 Sum_probs=86.6
Q ss_pred CCCCEEEEEeC-----C-------eEEEEECCCCcEEEEeeeCCC--eEEEEEecCCcEEEEEeCC-------CeEEEEE
Q 037288 266 TNPSQAVIGTN-----L-------GAAMVDMETGMASWVCRSKSD--ILAQQVIHSGNVVLCGFRN-------GAIVTVD 324 (513)
Q Consensus 266 ~~g~~l~s~s~-----~-------~i~vwd~~~~~~~~~~~~~~~--V~~l~~~~~~~~l~sg~~d-------g~i~iwd 324 (513)
.++.+++.|+. + .+.++|..+.+-...-....+ -.++.. -++.+++.|+.+ ..+.+||
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEe
Confidence 46677776651 1 166788877653332221111 122222 267788888764 3588899
Q ss_pred CCCCccccccccccccCcCeEEEeeCC-eEEEeEe-------------ecccCcccceeEeecCCCceEEEEEcCCCCEE
Q 037288 325 VRKRQRGCSSRAGRRHRIPYSRLQRND-RVTNEQW-------------FELKANIWPSHTTFMPSSISCLQSLQLYDQYF 390 (513)
Q Consensus 325 ~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~s~~w-------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 390 (513)
+.+.+... +..+.........+.... .++.|++ |..............+....++..+ +++.+
T Consensus 134 ~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 210 (318)
T 2woz_A 134 PVAAKWSE-VKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIV 210 (318)
T ss_dssp TTTTEEEE-ECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEE
T ss_pred CCCCCEeE-CCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEE
Confidence 98776543 333332222222333333 3333432 2222211111111111111122222 57777
Q ss_pred EEEecC-----CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCC--------------CcEEEEeCC
Q 037288 391 LASSMD-----GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGED--------------CKLRIWSIR 451 (513)
Q Consensus 391 ~s~s~d-----g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~D--------------g~v~vwd~~ 451 (513)
+.|+.+ ..+.+||+.......+..+......... +. .++++++.||.+ ..+.+||+.
T Consensus 211 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~ 286 (318)
T 2woz_A 211 IAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISL--VS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDD 286 (318)
T ss_dssp EEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEE--EE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETT
T ss_pred EEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEE--EE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCC
Confidence 877653 3467888863222222222211111111 22 346777777754 357788888
Q ss_pred CCeEEEE
Q 037288 452 SGELVFE 458 (513)
Q Consensus 452 ~~~~~~~ 458 (513)
+.+-...
T Consensus 287 ~~~W~~~ 293 (318)
T 2woz_A 287 KKEWAGM 293 (318)
T ss_dssp TTEEEEE
T ss_pred CCEehhh
Confidence 7664433
No 319
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.27 E-value=9.5 Score=37.72 Aligned_cols=52 Identities=10% Similarity=-0.001 Sum_probs=37.0
Q ss_pred cCcEEEEEEcCCCCEEEEEeCC-eEEEEECCCCcEEEEee---------eCCCeEEEEEecC
Q 037288 256 KCTVWTADFCTNPSQAVIGTNL-GAAMVDMETGMASWVCR---------SKSDILAQQVIHS 307 (513)
Q Consensus 256 ~~~V~~~~~s~~g~~l~s~s~~-~i~vwd~~~~~~~~~~~---------~~~~V~~l~~~~~ 307 (513)
-...+.++|.|+|+++++-..+ .|++++..++....... .....+.|+|+|+
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 3467899999999998887665 58888776665433222 1345779999995
No 320
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.17 E-value=2.7 Score=39.95 Aligned_cols=33 Identities=12% Similarity=0.260 Sum_probs=25.0
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEECCCCc
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQ 329 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 329 (513)
.....|+|.|||.++++--..|.|++++...+.
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCc
Confidence 456899999999877666448999998765443
No 321
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.95 E-value=2.9 Score=39.94 Aligned_cols=28 Identities=14% Similarity=0.146 Sum_probs=21.5
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEEC
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVDV 325 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd~ 325 (513)
.....++|.|+|+++ ++..+|.|+++|.
T Consensus 29 ~~P~~ia~~pdG~l~-V~e~~g~I~~~d~ 56 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYL-VTERPGRLVLISP 56 (354)
T ss_dssp SCEEEEEEEETTEEE-EEETTTEEEEECS
T ss_pred CCCeEEEEcCCCeEE-EEeCCCEEEEEeC
Confidence 346889999999855 4567799999973
No 322
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.75 E-value=3.4 Score=39.17 Aligned_cols=57 Identities=5% Similarity=0.093 Sum_probs=30.8
Q ss_pred eEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCC------cEEEEeCCCCeEEEE
Q 037288 398 TVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDC------KLRIWSIRSGELVFE 458 (513)
Q Consensus 398 ~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg------~v~vwd~~~~~~~~~ 458 (513)
.+.+||+.......+..+........ ++..++++++.||.++ .|.++++++++.+..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~----~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGV----SLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSE----EEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccce----eEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 57789987333334444432222211 1224678888888653 466668888876665
No 323
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.69 E-value=8.7 Score=35.95 Aligned_cols=215 Identities=10% Similarity=-0.034 Sum_probs=104.0
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEe--e---eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccc
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVC--R---SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRG 331 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~--~---~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 331 (513)
..+.++.|.+++..+++|..+.| +...+.|+.-... . ....+.+|.|.+ +..+++ +.++.|.. ....++.-
T Consensus 36 ~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW 111 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSW 111 (327)
T ss_dssp SCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSC
T ss_pred CcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCc
Confidence 47899999888888887766554 3444444321111 1 133588999986 455544 56675554 22223221
Q ss_pred cccccccccCcCeEEEeeCC--eEEEeE-----eeccc-CcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEe
Q 037288 332 CSSRAGRRHRIPYSRLQRND--RVTNEQ-----WFELK-ANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYD 403 (513)
Q Consensus 332 ~~~~~~~~h~~~v~~v~~~~--~~~s~~-----w~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd 403 (513)
..+.....+...+..+.+.+ .++... |.... +.-+..........+..+ .+.+++.+++++...+..+-.|
T Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~-~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 112 SQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNL-NRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp EECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEE-EECTTSCEEEEETTSSEEEEEC
T ss_pred eECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEE-EEcCCCcEEEEECCCcEEEEeC
Confidence 10111112233456666533 322222 22111 211111111123344444 5667777776665443333344
Q ss_pred cCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecC----CCCCeEEEEEcCCCceEE
Q 037288 404 HRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKF----SNSVPSAVCWRTQRSMGP 479 (513)
Q Consensus 404 ~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~----~~~~v~~v~~~p~~~~~~ 479 (513)
-.-.....+. ......+. .+.+++++..+ .++.+|.+++.+...++.-..+.. ....+.++++.+++.+++
T Consensus 191 ~gG~tW~~~~--~~~~~~~~--~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~ 265 (327)
T 2xbg_A 191 PGQTAWEPHN--RTTSRRLH--NMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWL 265 (327)
T ss_dssp TTCSSCEEEE--CCSSSCEE--EEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEE
T ss_pred CCCCceeECC--CCCCCccc--eeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEE
Confidence 2100111221 22333343 37788888755 455678887775333443332221 123478888987765555
Q ss_pred ee
Q 037288 480 QI 481 (513)
Q Consensus 480 t~ 481 (513)
..
T Consensus 266 ~g 267 (327)
T 2xbg_A 266 AG 267 (327)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 324
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.46 E-value=9.9 Score=36.17 Aligned_cols=55 Identities=5% Similarity=0.073 Sum_probs=37.5
Q ss_pred EEEcCCCCEEEEEe-CCCcEEEEeCCC-CeEE--EEecCCCCCeEEEEEcC-CCceEEeeC
Q 037288 427 LGVDQSERFVMSGG-EDCKLRIWSIRS-GELV--FEDKFSNSVPSAVCWRT-QRSMGPQIE 482 (513)
Q Consensus 427 ~~~s~~g~~l~sg~-~Dg~v~vwd~~~-~~~~--~~~~~~~~~v~~v~~~p-~~~~~~t~~ 482 (513)
++|+||++.|+.+. ..+.|+.|++.. +++. ..+. .....-.++..+ ++.+.+++.
T Consensus 226 ia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 226 INISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEE
T ss_pred ceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEec
Confidence 89999998877654 578899999863 4322 2332 245577888888 477766553
No 325
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.16 E-value=7.8 Score=36.91 Aligned_cols=84 Identities=6% Similarity=-0.038 Sum_probs=48.2
Q ss_pred CCeEEEEecCCCCcc--ceEEecCCCCceeEEEEEEcCCCCEEEEEeC-----------------CCcEEEEeCCCCeEE
Q 037288 396 DGTVKLYDHRLTTRG--AVQSYEGHVNSHTRIQLGVDQSERFVMSGGE-----------------DCKLRIWSIRSGELV 456 (513)
Q Consensus 396 dg~i~lwd~~~~~~~--~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~-----------------Dg~v~vwd~~~~~~~ 456 (513)
+..|.+|++...... .+.++.+. .....-++.++++|++.++... .|.|+-+|. ++.
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~-~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~- 213 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHK-LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV- 213 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCT-TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-
T ss_pred CCeEEEEEEECCCCEEEEEeccccC-CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-
Confidence 567888887632221 44455543 2222345788899988777541 245555554 332
Q ss_pred EEecCCCCCeEEEEEcCCC-ceEEeeCC
Q 037288 457 FEDKFSNSVPSAVCWRTQR-SMGPQIEG 483 (513)
Q Consensus 457 ~~~~~~~~~v~~v~~~p~~-~~~~t~~~ 483 (513)
..+...-...+.++|+|++ .++++...
T Consensus 214 ~~~~~~l~~pNGia~spDg~~lYvadt~ 241 (355)
T 3sre_A 214 RVVAEGFDFANGINISPDGKYVYIAELL 241 (355)
T ss_dssp EEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred EEeecCCcccCcceECCCCCEEEEEeCC
Confidence 2222223457999999995 56665543
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.05 E-value=3 Score=39.78 Aligned_cols=30 Identities=13% Similarity=0.155 Sum_probs=22.8
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEECC
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~ 326 (513)
.....|+|.|+|+.|+++...|.|++++..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC
Confidence 346899999999834455678999999853
No 327
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.78 E-value=3.7 Score=39.07 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=21.4
Q ss_pred CCeEEEEEecCCcEEEEEeCCCeEEEEE
Q 037288 297 SDILAQQVIHSGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 297 ~~V~~l~~~~~~~~l~sg~~dg~i~iwd 324 (513)
.....++|.|+|++++ +..+|.|.+++
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~ 57 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR 57 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE
Confidence 3467999999998554 46779999998
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.68 E-value=4.5 Score=37.57 Aligned_cols=63 Identities=14% Similarity=-0.085 Sum_probs=35.8
Q ss_pred CCCEEEEEe----C-----CeEEEEECCCCcEEEEeeeCCC--eEEEEEecCCcEEEEEeC-C-----CeEEEEECCCCc
Q 037288 267 NPSQAVIGT----N-----LGAAMVDMETGMASWVCRSKSD--ILAQQVIHSGNVVLCGFR-N-----GAIVTVDVRKRQ 329 (513)
Q Consensus 267 ~g~~l~s~s----~-----~~i~vwd~~~~~~~~~~~~~~~--V~~l~~~~~~~~l~sg~~-d-----g~i~iwd~~~~~ 329 (513)
++.+++.|+ + +.+.++|..+++-...-....+ -.++. ..++.+++.|+. + ..+.+||+.+.+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 566666665 1 2388899988753222111111 12222 246778888876 2 468888888765
Q ss_pred c
Q 037288 330 R 330 (513)
Q Consensus 330 ~ 330 (513)
.
T Consensus 177 W 177 (315)
T 4asc_A 177 W 177 (315)
T ss_dssp E
T ss_pred E
Confidence 4
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.50 E-value=26 Score=39.26 Aligned_cols=61 Identities=7% Similarity=0.058 Sum_probs=42.3
Q ss_pred CEEEEEeCCeEEEEECCCCcEEE--EeeeCCCeEEEEEecC------CcEEEEEeC-CCeEEEEECCCCc
Q 037288 269 SQAVIGTNLGAAMVDMETGMASW--VCRSKSDILAQQVIHS------GNVVLCGFR-NGAIVTVDVRKRQ 329 (513)
Q Consensus 269 ~~l~s~s~~~i~vwd~~~~~~~~--~~~~~~~V~~l~~~~~------~~~l~sg~~-dg~i~iwd~~~~~ 329 (513)
.+++.++++.+.++.+..++... ...-...|.|+++.|. +.++++|.. |++|+|+++...+
T Consensus 524 ~~vvva~g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 524 SQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp SEEEEEETTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEECCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 45555555567777776554322 2234567999999863 369999997 9999999998644
No 330
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.33 E-value=31 Score=38.55 Aligned_cols=67 Identities=12% Similarity=0.159 Sum_probs=40.1
Q ss_pred CCEEEEEec-CCeEEEEecCCCCccce--EEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeC--CCCeEE
Q 037288 387 DQYFLASSM-DGTVKLYDHRLTTRGAV--QSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSI--RSGELV 456 (513)
Q Consensus 387 ~~~l~s~s~-dg~i~lwd~~~~~~~~~--~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~--~~~~~~ 456 (513)
+.++++|.. |++|+|+++. ....+ +.+.+.. ....+.+.--....+|..|-.||.+.-+.+ .+|++.
T Consensus 571 s~~~aVg~~~d~tv~I~sL~--~l~~~~~~~L~~~~-~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~ 642 (1158)
T 3ei3_A 571 SPLCAIGLWTDISARILKLP--SFELLHKEMLGGEI-IPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 642 (1158)
T ss_dssp CSEEEEEETTTTEEEEEETT--TCCEEEEEECCSSC-CEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEE
T ss_pred ccEEEEEECCCCEEEEEECC--CCCeEEEEECCCCC-CCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccc
Confidence 578999996 9999999996 33333 2332211 122222222233457889999998765544 456544
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=89.27 E-value=15 Score=34.77 Aligned_cols=76 Identities=16% Similarity=0.068 Sum_probs=49.2
Q ss_pred eccccCcEEEEEEcCCCCEEEEEe-CCeEEEEECCCCcEEEEee-------eCCCeEEEEEecC----CcEEEEE--eCC
Q 037288 252 VASFKCTVWTADFCTNPSQAVIGT-NLGAAMVDMETGMASWVCR-------SKSDILAQQVIHS----GNVVLCG--FRN 317 (513)
Q Consensus 252 ~~~h~~~V~~~~~s~~g~~l~s~s-~~~i~vwd~~~~~~~~~~~-------~~~~V~~l~~~~~----~~~l~sg--~~d 317 (513)
+..--..-+.++|.|+|.++++-. .+.|++++..++....... .......|+|+|+ +.+.++- ..+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 333345778999999999888886 6779888876665432211 2345799999995 4433322 234
Q ss_pred CeEEEEECCC
Q 037288 318 GAIVTVDVRK 327 (513)
Q Consensus 318 g~i~iwd~~~ 327 (513)
..|.-|.+..
T Consensus 107 ~~v~R~~~~~ 116 (347)
T 3das_A 107 NRIVRMLYDE 116 (347)
T ss_dssp EEEEEEEBCT
T ss_pred CEEEEEEeCC
Confidence 5566666554
No 332
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=88.79 E-value=24 Score=36.49 Aligned_cols=182 Identities=8% Similarity=-0.086 Sum_probs=102.5
Q ss_pred CcEEEEEEcCCCCEEE-EE-eCCeEEEEECCCCcEEEEeeeC-CCeEEEEEecCC-cEEEEEeCCCeEEEEECCCCcccc
Q 037288 257 CTVWTADFCTNPSQAV-IG-TNLGAAMVDMETGMASWVCRSK-SDILAQQVIHSG-NVVLCGFRNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~-s~-s~~~i~vwd~~~~~~~~~~~~~-~~V~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~ 332 (513)
..+..++|++.+..|. +- .++.|..+++............ .....+++.+.+ ++..+-...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 4678999998665554 43 3566888888765544444422 346788888765 455555557889999987543211
Q ss_pred ccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEe--cCCeEEEEecCCCCcc
Q 037288 333 SSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASS--MDGTVKLYDHRLTTRG 410 (513)
Q Consensus 333 ~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s--~dg~i~lwd~~~~~~~ 410 (513)
+ +...-.. ... +++.|....|..+. ..+.|...++. ..
T Consensus 117 -l--~~~~l~~---------------------------------P~~-iavdp~~G~lY~tD~g~~~~I~r~~~d---G~ 156 (628)
T 4a0p_A 117 -L--VWKDLDS---------------------------------PRA-LALDPAEGFMYWTEWGGKPKIDRAAMD---GS 156 (628)
T ss_dssp -E--ECSSCCC---------------------------------EEE-EEEETTTTEEEEEECSSSCEEEEEETT---SC
T ss_pred -E--EeCCCCC---------------------------------ccc-EEEccCCCeEEEeCCCCCCEEEEEeCC---CC
Confidence 0 0011111 122 35555444444443 25677777774 32
Q ss_pred ceEEecCCCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeC
Q 037288 411 AVQSYEGHVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 411 ~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
....+...-... ..++++++++.|+.+. ..+.|...|+..... ..+........++++..+ .++.|.-
T Consensus 157 ~~~~l~~~~~~P--~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~-~ly~tD~ 225 (628)
T 4a0p_A 157 ERTTLVPNVGRA--NGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQD-YIYWTDW 225 (628)
T ss_dssp SCEEEECSCSSE--EEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEETT-EEEEEET
T ss_pred ceEEEECCCCCc--ceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEECC-EEEEecC
Confidence 222222222222 3388889776666554 467899999866443 233333344567877764 5555553
No 333
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.13 E-value=5.7 Score=40.08 Aligned_cols=150 Identities=7% Similarity=-0.004 Sum_probs=81.1
Q ss_pred eEEEEECCC----C-cEEEEeeeCCCeEEEEEecCCcEEEEE-eCCCeEEEEECCCCccccccccccccCcCeEEEeeCC
Q 037288 278 GAAMVDMET----G-MASWVCRSKSDILAQQVIHSGNVVLCG-FRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRND 351 (513)
Q Consensus 278 ~i~vwd~~~----~-~~~~~~~~~~~V~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~ 351 (513)
++.+.|.+. + .....+........+.++|||++++++ -.+.++.++|++...... -..+......+.+
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~-~~k~~~~~~~~~a----- 372 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLF-AGKLADPRDVIVG----- 372 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHH-TTCCSCGGGGEEE-----
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhh-hccccCcccceEe-----
Confidence 355555544 2 233334444556778899999766655 458999999987432100 0000001111110
Q ss_pred eEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCC------C--ccceEEecCCCCcee
Q 037288 352 RVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLT------T--RGAVQSYEGHVNSHT 423 (513)
Q Consensus 352 ~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~------~--~~~~~~~~~h~~~v~ 423 (513)
.....-.... ..|.++|+...+-..|..|..|++... + ...+..+..|-++-.
T Consensus 373 ------------------e~e~GlGPlH-t~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH 433 (638)
T 3sbq_A 373 ------------------EPELGLGPLH-TTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGH 433 (638)
T ss_dssp ------------------CCBCCSCEEE-EEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEE
T ss_pred ------------------eccCCCcccE-EEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcc
Confidence 0111111122 368888866666668999999998521 0 124556666655421
Q ss_pred EEEE----EEcCCCCEEEEEeC---CCcE----------EEEeCCCC
Q 037288 424 RIQL----GVDQSERFVMSGGE---DCKL----------RIWSIRSG 453 (513)
Q Consensus 424 ~~~~----~~s~~g~~l~sg~~---Dg~v----------~vwd~~~~ 453 (513)
. .. .-.++|+||++... |..+ .+.|+...
T Consensus 434 ~-~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGd 479 (638)
T 3sbq_A 434 L-HASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGD 479 (638)
T ss_dssp E-EETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSS
T ss_pred c-ccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCC
Confidence 1 11 12578999999754 5543 67777543
No 334
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=87.13 E-value=11 Score=35.82 Aligned_cols=50 Identities=8% Similarity=-0.026 Sum_probs=34.6
Q ss_pred CcEEEEEEcCCCC-EEEEEeCCeEEEEECCCCcEEEEe--------eeCCCeEEEEEecC
Q 037288 257 CTVWTADFCTNPS-QAVIGTNLGAAMVDMETGMASWVC--------RSKSDILAQQVIHS 307 (513)
Q Consensus 257 ~~V~~~~~s~~g~-~l~s~s~~~i~vwd~~~~~~~~~~--------~~~~~V~~l~~~~~ 307 (513)
..-+.++|.|+|+ ++++-..+.|++++.. +.....+ ........|+|+|+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence 4678999999999 8877777789888853 3321111 12335789999995
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.55 E-value=13 Score=39.03 Aligned_cols=151 Identities=13% Similarity=0.088 Sum_probs=80.0
Q ss_pred CCCCEEEEEeC-----CeEEEEECCCCcEEEEe-e-----eCC--CeEEEEEec-CCcEEEEEeCC------CeEEEEEC
Q 037288 266 TNPSQAVIGTN-----LGAAMVDMETGMASWVC-R-----SKS--DILAQQVIH-SGNVVLCGFRN------GAIVTVDV 325 (513)
Q Consensus 266 ~~g~~l~s~s~-----~~i~vwd~~~~~~~~~~-~-----~~~--~V~~l~~~~-~~~~l~sg~~d------g~i~iwd~ 325 (513)
.++.+++.|+. +.+.+||..+++-...- . ... .-.++.... ++.+++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 46667776653 23788998887643332 1 111 123333333 77888888754 35778888
Q ss_pred CCCccccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCC--eEEEEe
Q 037288 326 RKRQRGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDG--TVKLYD 403 (513)
Q Consensus 326 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg--~i~lwd 403 (513)
.+..... +..+... ..-.+...+ .++..++.|+.++ .+.+||
T Consensus 476 ~t~~W~~-~~~~p~~----------------------------------R~~h~~~~~-~~~~iyv~GG~~~~~~v~~yd 519 (695)
T 2zwa_A 476 KTREWSM-IKSLSHT----------------------------------RFRHSACSL-PDGNVLILGGVTEGPAMLLYN 519 (695)
T ss_dssp TTTEEEE-CCCCSBC----------------------------------CBSCEEEEC-TTSCEEEECCBCSSCSEEEEE
T ss_pred CCCcEEE-CCCCCCC----------------------------------cccceEEEE-cCCEEEEECCCCCCCCEEEEE
Confidence 7765432 1111100 000111121 3778888888755 689999
Q ss_pred cCCCCccceEE---ecCCCCceeEEEEEEcCC-CCEEEEEeC--C-----CcEEEEeCCCCe
Q 037288 404 HRLTTRGAVQS---YEGHVNSHTRIQLGVDQS-ERFVMSGGE--D-----CKLRIWSIRSGE 454 (513)
Q Consensus 404 ~~~~~~~~~~~---~~~h~~~v~~~~~~~s~~-g~~l~sg~~--D-----g~v~vwd~~~~~ 454 (513)
........+.. +......... +.++.+ +++++.||. + ..+.+||+.+.+
T Consensus 520 ~~t~~W~~~~~~g~~p~~r~~~~a--~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 520 VTEEIFKDVTPKDEFFQNSLVSAG--LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTTTEEEECCCSSGGGGSCCBSCE--EEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCceEEccCCCCCCCcccceeE--EEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 86322222221 1111111111 344555 667777776 2 358899998876
No 336
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=82.58 E-value=26 Score=32.81 Aligned_cols=65 Identities=8% Similarity=-0.055 Sum_probs=36.7
Q ss_pred CCCEEEEEe--CCeEEEEECCC--CcEEEEeeeC--CC-eEEEEEecCCcEEEEEeC-C---------CeEEEEECCCCc
Q 037288 267 NPSQAVIGT--NLGAAMVDMET--GMASWVCRSK--SD-ILAQQVIHSGNVVLCGFR-N---------GAIVTVDVRKRQ 329 (513)
Q Consensus 267 ~g~~l~s~s--~~~i~vwd~~~--~~~~~~~~~~--~~-V~~l~~~~~~~~l~sg~~-d---------g~i~iwd~~~~~ 329 (513)
++.+++.|+ .+.+.++|+.+ .+-...-... .. -.+++. -++.+++.|+. + ..+.+||+.+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 666666664 23488899874 3322111111 11 122222 36777777776 2 478999998876
Q ss_pred ccc
Q 037288 330 RGC 332 (513)
Q Consensus 330 ~~~ 332 (513)
...
T Consensus 98 W~~ 100 (357)
T 2uvk_A 98 WVK 100 (357)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=80.08 E-value=4.1 Score=38.56 Aligned_cols=63 Identities=14% Similarity=0.202 Sum_probs=40.6
Q ss_pred CCCEEEEEeCCeEEEEECCCCcEEEEeeeC--CCeEEEEEe--c-CCcEEEEE-eCCCeEEEEECCCCc
Q 037288 267 NPSQAVIGTNLGAAMVDMETGMASWVCRSK--SDILAQQVI--H-SGNVVLCG-FRNGAIVTVDVRKRQ 329 (513)
Q Consensus 267 ~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~--~~V~~l~~~--~-~~~~l~sg-~~dg~i~iwd~~~~~ 329 (513)
++..++...|+.|..+|..+|+..+.+... .++....-. + ++..++.. +.||.+..+|..++.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~ 78 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGL 78 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCc
Confidence 344555556778999999999999988754 333322100 1 22344343 589999999987664
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.05 E-value=31 Score=36.14 Aligned_cols=65 Identities=20% Similarity=0.134 Sum_probs=38.9
Q ss_pred CCCEEEEEeC-------CeEEEEECCCCcEEEEeeeC--CCeEEEEEecCCcEEEEEeCCC--eEEEEECCCCccc
Q 037288 267 NPSQAVIGTN-------LGAAMVDMETGMASWVCRSK--SDILAQQVIHSGNVVLCGFRNG--AIVTVDVRKRQRG 331 (513)
Q Consensus 267 ~g~~l~s~s~-------~~i~vwd~~~~~~~~~~~~~--~~V~~l~~~~~~~~l~sg~~dg--~i~iwd~~~~~~~ 331 (513)
++.+++.|+. +.+.+||..+.+-...-... ..-.+.....++.+++.|+.++ .+.+||+.+....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK 526 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE
Confidence 6777776642 23778898876532221111 1112333324788888888765 6899999887643
No 339
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=79.78 E-value=38 Score=31.21 Aligned_cols=69 Identities=10% Similarity=0.080 Sum_probs=39.6
Q ss_pred EEcCCCCEEEEEe--cCC--eEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEE
Q 037288 382 SLQLYDQYFLASS--MDG--TVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE-DCKLRIWSIRSGELV 456 (513)
Q Consensus 382 ~~~~~~~~l~s~s--~dg--~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~-Dg~v~vwd~~~~~~~ 456 (513)
.++++++.|+-.. .++ .|...++. ......+..+.. ..++++++.|+-.+. ...|++-++..+...
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d---Gs~~~~lt~~~~------~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~ 180 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRID---GEEKKKIKNHYL------FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA 180 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETT---SCCCEEEESSCC------CCSEEETTEEEEECTTTCCEEEEETTTTEEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECC---CCCeEEEeCCCc------eEeeEECCEEEEEeCCCceEEEEECCCCCEE
Confidence 3455777777665 333 44444553 223444544432 234667888876654 678888888776644
Q ss_pred EEe
Q 037288 457 FED 459 (513)
Q Consensus 457 ~~~ 459 (513)
..+
T Consensus 181 ~l~ 183 (302)
T 3s25_A 181 LFY 183 (302)
T ss_dssp EEE
T ss_pred EEe
Confidence 333
No 340
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=76.78 E-value=72 Score=32.80 Aligned_cols=183 Identities=7% Similarity=-0.120 Sum_probs=95.7
Q ss_pred CcEEEEEEcCCCCEEE-EE-eCCeEEEEECCCCcEEEEeeeC-CCeEEEEEecC-CcEEEEEeCCCeEEEEECCCCcccc
Q 037288 257 CTVWTADFCTNPSQAV-IG-TNLGAAMVDMETGMASWVCRSK-SDILAQQVIHS-GNVVLCGFRNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~-s~-s~~~i~vwd~~~~~~~~~~~~~-~~V~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~ 332 (513)
..+.+++|.+.+..|. +- ..+.|..+++.......+.... .....+++.+. +++..+-...+.|.+.++.......
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 3577899988554444 43 3456888888765443333322 45778889874 4555555667899999887543211
Q ss_pred ccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCC-CCEEEEEec-CCeEEEEecCCCCcc
Q 037288 333 SSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLY-DQYFLASSM-DGTVKLYDHRLTTRG 410 (513)
Q Consensus 333 ~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~s~-dg~i~lwd~~~~~~~ 410 (513)
+ +...-.... . +++.|. |.++.+-.. .+.|...++. ..
T Consensus 429 -l--~~~~l~~P~---------------------------------~-iavdp~~G~ly~tD~g~~~~I~r~~~d---G~ 468 (619)
T 3s94_A 429 -L--ISEDLEEPR---------------------------------A-IVLDPMVGYMYWTDWGEIPKIERAALD---GS 468 (619)
T ss_dssp -E--ECTTCCSEE---------------------------------E-EEEETTTTEEEEEECSSSCEEEEEETT---SC
T ss_pred -E--EECCCCCee---------------------------------e-EEEEcCCCcEEEecCCCCCEEEEEccC---CC
Confidence 0 011111122 2 244554 444443322 3566666653 22
Q ss_pred ceEEe-cCCCCceeEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeC
Q 037288 411 AVQSY-EGHVNSHTRIQLGVDQSERFVMSGG-EDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 411 ~~~~~-~~h~~~v~~~~~~~s~~g~~l~sg~-~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
....+ ...-..... ++++++++.|+.+. ..+.|...++........+........+++...+ .++.+..
T Consensus 469 ~~~~l~~~~l~~P~G--lalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~-~ly~tD~ 539 (619)
T 3s94_A 469 DRVVLVNTSLGWPNG--LALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD-YVYWTDW 539 (619)
T ss_dssp SCEEEECSSCSCEEE--EEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETT-EEEEECT
T ss_pred ccEEEEeCCCCCCee--eEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECC-EEEEeec
Confidence 22222 222223334 78888766666554 4567888887654322222222222345665555 4454443
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=75.90 E-value=5.5 Score=37.67 Aligned_cols=30 Identities=13% Similarity=0.129 Sum_probs=26.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEecC
Q 037288 432 SERFVMSGGEDCKLRIWSIRSGELVFEDKF 461 (513)
Q Consensus 432 ~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~ 461 (513)
.+..+++|+.+|.+...|+.+|+.+..+..
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 466889999999999999999999999764
No 342
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=74.87 E-value=20 Score=35.50 Aligned_cols=30 Identities=7% Similarity=0.036 Sum_probs=23.2
Q ss_pred CCeEEEEEecCCc-EEEEEeCCCeEEEEECC
Q 037288 297 SDILAQQVIHSGN-VVLCGFRNGAIVTVDVR 326 (513)
Q Consensus 297 ~~V~~l~~~~~~~-~l~sg~~dg~i~iwd~~ 326 (513)
..-+.|+|.|+|. .|+++.+.|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 3467899999995 45566789999999754
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=74.45 E-value=52 Score=30.08 Aligned_cols=69 Identities=14% Similarity=0.173 Sum_probs=36.9
Q ss_pred CCCEEEEEecC-------CeEEEEecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeC------CCcEEEEeCCC
Q 037288 386 YDQYFLASSMD-------GTVKLYDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGE------DCKLRIWSIRS 452 (513)
Q Consensus 386 ~~~~l~s~s~d-------g~i~lwd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~------Dg~v~vwd~~~ 452 (513)
++..++.|+.+ ..+.+||+.......+..+. .......++. .++++++.||. -..+.+||+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p---~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP---IKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS---SCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC---CcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCC
Confidence 56777777764 34778888622222221111 1111111222 45677777764 23599999988
Q ss_pred CeEEEE
Q 037288 453 GELVFE 458 (513)
Q Consensus 453 ~~~~~~ 458 (513)
.+-...
T Consensus 185 ~~W~~~ 190 (318)
T 2woz_A 185 GDWKDL 190 (318)
T ss_dssp TEEEEE
T ss_pred CEEEEC
Confidence 764443
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=73.77 E-value=93 Score=32.67 Aligned_cols=71 Identities=14% Similarity=-0.012 Sum_probs=47.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeee------CCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCc
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRS------KSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQ 329 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~------~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 329 (513)
..|.++....+|.+.+ |+.+++..+|..+++....... ...|.++....++..|..|+. +-+..+|..+.+
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 4688888888888665 4456888899887764332111 123888888777766556664 457788877654
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.74 E-value=17 Score=39.69 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=31.7
Q ss_pred eEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 037288 423 TRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFED 459 (513)
Q Consensus 423 ~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~ 459 (513)
...+++..++..++++-+.|+++|+||+.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3455667788899999999999999999999998874
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=71.55 E-value=15 Score=41.64 Aligned_cols=130 Identities=12% Similarity=0.196 Sum_probs=79.0
Q ss_pred eEEEEECCCCcEEEE--eeeCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccccccccCcCeEEEeeCCeEEE
Q 037288 278 GAAMVDMETGMASWV--CRSKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSRAGRRHRIPYSRLQRNDRVTN 355 (513)
Q Consensus 278 ~i~vwd~~~~~~~~~--~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~s 355 (513)
+|.|.|+..+..... +...+.| .+|..++|+.=. ..++.|+|+.+..... .
T Consensus 49 ~vvIidl~~~~~~~rrpi~AdsAI----MnP~~~iiALra-g~~lQiFnl~~k~klk---s------------------- 101 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPISADSAI----MNPASKVIALKA-GKTLQIFNIEMKSKMK---A------------------- 101 (1630)
T ss_pred eEEEEECCCCCCcccccccchhhc----cCCCcceEEEec-CCeEEEeehHHhhhhc---c-------------------
Confidence 588899987654321 1222223 467777666654 6899999998776432 1
Q ss_pred eEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEecCCCC--ceeEEEEEEcCCC
Q 037288 356 EQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSYEGHVN--SHTRIQLGVDQSE 433 (513)
Q Consensus 356 ~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~~~h~~--~v~~~~~~~s~~g 433 (513)
...+..|.--.|++++ .|+..+ +..|.-|++.. ...|++.|..|.. ....+....++++
T Consensus 102 ---------------~~~~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~-~s~P~k~fdR~~~L~~~QIinY~~d~~~ 162 (1630)
T 1xi4_A 102 ---------------HTMTDDVTFWKWISLN--TVALVT-DNAVYHWSMEG-ESQPVKMFDRHSSLAGCQIINYRTDAKQ 162 (1630)
T ss_pred ---------------cccCCCceEEEecCCC--eeEEEc-CCeEEEeccCC-CCccHHHHhcchhcccCeeEEeeeCCCC
Confidence 1122333333577644 344444 34899999952 2337777766632 2223446778999
Q ss_pred CEEEEEe-------CCCcEEEEeCCCC
Q 037288 434 RFVMSGG-------EDCKLRIWSIRSG 453 (513)
Q Consensus 434 ~~l~sg~-------~Dg~v~vwd~~~~ 453 (513)
+|++..| -.|.+.+|++..+
T Consensus 163 kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 163 KWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred CeEEEEeeccCCCcccceeeeeecccc
Confidence 9987544 3588999998654
No 347
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=68.91 E-value=1.2e+02 Score=31.85 Aligned_cols=185 Identities=12% Similarity=0.110 Sum_probs=96.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEee-eCCCeEEEEEecCCcEEEEEeCCCeEEEEECCCCccccccc
Q 037288 257 CTVWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCR-SKSDILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGCSSR 335 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~-~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 335 (513)
..|.++....+|. |-.|+++++..+|..+.+...... ....|.++.. .+|. |..|+.+ -+..+|..+.+...
T Consensus 63 ~~i~~i~~d~~g~-lWigT~~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~--- 135 (758)
T 3ott_A 63 TRIYCGVIIDNTY-LYMGTDNGILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTS--- 135 (758)
T ss_dssp SCEEEEEEETTTE-EEEEETTEEEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEE---
T ss_pred ceEEEEEEcCCCc-EEEEeCCCeEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEE---
Confidence 4688887776665 445557789999988764322111 1234777654 3554 5556655 57888886654211
Q ss_pred cccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEEEecCCCCccceEEe
Q 037288 336 AGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKLYDHRLTTRGAVQSY 415 (513)
Q Consensus 336 ~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~lwd~~~~~~~~~~~~ 415 (513)
+...... .....+.++ ....++.+.+ |+.+ -+..+|.. ......+
T Consensus 136 -~~~~~~~----------------------------l~~~~i~~i-~~d~~g~lWi-gt~~-Gl~~~~~~---~~~~~~~ 180 (758)
T 3ott_A 136 -FDTRRNG----------------------------LPNNTIYSI-IRTKDNQIYV-GTYN-GLCRYIPS---NGKFEGI 180 (758)
T ss_dssp -ECHHHHC----------------------------CSCSCEEEE-EECTTCCEEE-EETT-EEEEEETT---TTEEEEE
T ss_pred -eccCCCC----------------------------cCCCeEEEE-EEcCCCCEEE-EeCC-CHhhCccC---CCceEEe
Confidence 1000000 001122332 3344565544 5544 47778864 2222222
Q ss_pred cCC------CCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEecCCCCCeEEEEEcCCCceEEeeCCCee
Q 037288 416 EGH------VNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRSGELVFEDKFSNSVPSAVCWRTQRSMGPQIEGKIH 486 (513)
Q Consensus 416 ~~h------~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~~t~~~~~~ 486 (513)
... ...|.. +..+.++..|..|.. +-|..+|..+++...........|.+++-.+++.+.++...++.
T Consensus 181 ~~~~~~~~~~~~i~~--i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~ 254 (758)
T 3ott_A 181 PLPVHSSQSNLFVNS--LLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDNGLY 254 (758)
T ss_dssp CCCCCTTCSSCCEEE--EEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETTEEE
T ss_pred cCCCccccccceeEE--EEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCCcee
Confidence 211 112333 666777765555553 45888998877643321112334788887777655555454443
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=64.07 E-value=1.3e+02 Score=30.53 Aligned_cols=87 Identities=11% Similarity=0.071 Sum_probs=55.3
Q ss_pred CCCceEEEEEcCCCCEEEEEec-CCeEEEEecCCCCc-------c----ceEEecCCCCceeEEEEEEcCCCCEEEEEeC
Q 037288 374 PSSISCLQSLQLYDQYFLASSM-DGTVKLYDHRLTTR-------G----AVQSYEGHVNSHTRIQLGVDQSERFVMSGGE 441 (513)
Q Consensus 374 ~~~v~~~~~~~~~~~~l~s~s~-dg~i~lwd~~~~~~-------~----~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~ 441 (513)
+.+... +-.+|+|+++++++. +.++.++|++.... . .+...+.-.+ -+..+|+++|....+--.
T Consensus 322 pksPHG-v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG---PlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 322 PKNPHG-CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG---PLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp SSSCCC-EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC---EEEEEECSSSEEEEEETT
T ss_pred CCCCcc-eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc---ccEEEECCCCceEeeeee
Confidence 333333 367899999988775 88999999873111 0 1222222222 255899999955555668
Q ss_pred CCcEEEEeCCCC----------eEEEEecCCCC
Q 037288 442 DCKLRIWSIRSG----------ELVFEDKFSNS 464 (513)
Q Consensus 442 Dg~v~vwd~~~~----------~~~~~~~~~~~ 464 (513)
|..|.-|++... ..+..+..|-.
T Consensus 398 dSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq 430 (638)
T 3sbq_A 398 DSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ 430 (638)
T ss_dssp TTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSC
T ss_pred cceEEEEeccHHHHHhcCccCCeeeeccccccC
Confidence 999999999754 45555555543
No 349
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.05 E-value=18 Score=40.41 Aligned_cols=33 Identities=12% Similarity=0.066 Sum_probs=29.3
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEe
Q 037288 427 LGVDQSERFVMSGGEDCKLRIWSIRSGELVFED 459 (513)
Q Consensus 427 ~~~s~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~ 459 (513)
++..++..+|++-+.|+++|+||+.+++++.+.
T Consensus 243 ~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 243 MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 455678899999999999999999999999884
No 350
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=54.92 E-value=1.6e+02 Score=28.80 Aligned_cols=166 Identities=6% Similarity=0.010 Sum_probs=83.8
Q ss_pred CcEEEEEEcCCCCEEE-EE---eC----CeEEEEECCCCcEEEEeeeCCCeEEEEEecC---CcEEEEEeCC---CeEEE
Q 037288 257 CTVWTADFCTNPSQAV-IG---TN----LGAAMVDMETGMASWVCRSKSDILAQQVIHS---GNVVLCGFRN---GAIVT 322 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~-s~---s~----~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~---~~~l~sg~~d---g~i~i 322 (513)
..|..-..+++.++++ +| .+ |.+.+|..+.+....+-+|......+.+.-+ .++++-+.+. ++++|
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi 230 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 230 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence 4566677778888776 33 12 3478999988776555555433333322211 1344444443 78999
Q ss_pred EECCCCc-cccccccccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecCCeEEE
Q 037288 323 VDVRKRQ-RGCSSRAGRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMDGTVKL 401 (513)
Q Consensus 323 wd~~~~~-~~~~~~~~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~dg~i~l 401 (513)
.++.... ..+ . .......+-|.| -...+-..+ ...++.-..+..-+.-|.|++
T Consensus 231 ~Ei~~~~~~~~---~---f~kk~vdv~fpp-------------------e~~~DFPva-mqvs~kygviyviTK~G~i~l 284 (494)
T 1bpo_A 231 IEVGTPPTGNQ---P---FPKKAVDVFFPP-------------------EAQNDFPVA-MQISEKHDVVFLITKYGYIHL 284 (494)
T ss_dssp EECSCCCTTCC---C---CCCEEEECCCCT-------------------TSTTCCEEE-EEEETTTTEEEEEETTSEEEE
T ss_pred EEcCCCccCCC---C---ccceeeeeeCCc-------------------ccccCceeE-EEecccCCEEEEEecCceEEE
Confidence 9986541 111 0 011111111111 000112222 245666677778888999999
Q ss_pred EecCCCCccceEEecCCCCceeEEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 037288 402 YDHRLTTRGAVQSYEGHVNSHTRIQLGVDQSERFVMSGGEDCKLRIWSIRS 452 (513)
Q Consensus 402 wd~~~~~~~~~~~~~~h~~~v~~~~~~~s~~g~~l~sg~~Dg~v~vwd~~~ 452 (513)
||+. +..++..-+-....+.. .+-+.+..=+++....|.|.--.+..
T Consensus 285 yDle--Tgt~i~~nrIs~~~iF~--t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 285 YDLE--TGTCIYMNRISGETIFV--TAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EETT--TCCEEEEEECCSSCEEE--EEEETTTTEEEEEETTCEEEEEEECT
T ss_pred Eecc--cceeeeeecccCCceEE--ecccCCCCcEEEEccCceEEEEEEcc
Confidence 9996 43355544433333322 22233322344444555554444433
No 351
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.03 E-value=16 Score=38.12 Aligned_cols=31 Identities=26% Similarity=0.601 Sum_probs=27.2
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEEEecC
Q 037288 431 QSERFVMSGGEDCKLRIWSIRSGELVFEDKF 461 (513)
Q Consensus 431 ~~g~~l~sg~~Dg~v~vwd~~~~~~~~~~~~ 461 (513)
.++.+|++-+.|.++|+||+.+++++.+...
T Consensus 229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp ETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4578999999999999999999999988543
No 352
>1dtk_A Dendrotoxin K; presynaptic neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.8.1.1
Probab=50.32 E-value=2.6 Score=28.02 Aligned_cols=17 Identities=29% Similarity=0.876 Sum_probs=13.0
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 17 ~~~rw~yd~~~~~C~~F 33 (57)
T 1dtk_A 17 KIPSFYYKWKAKQCLPF 33 (57)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CcceEEEcCCCCcCcEE
Confidence 36889999999875444
No 353
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=50.04 E-value=81 Score=31.80 Aligned_cols=184 Identities=20% Similarity=0.295 Sum_probs=91.8
Q ss_pred eeeeEEeccccCeEEEEEeecccccccceeEEeeeccccccccccccccCCCCCccccCcceeeecccceEEEecCCCCc
Q 037288 122 RTDVLLTGSVNGFFSLFEVGNVGQHAHDTVKFIPSCVWPRIKDNKTESSKAPEHIWRLNKASILMPSSVSCIKLFGKHPS 201 (513)
Q Consensus 122 ~~~~l~tg~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~s~i~si~~~~~~~~ 201 (513)
...+++.|..||.+..|+-. . .+...|.|..+.+.+.......-......+-.+. .-.+..+.+.+
T Consensus 84 R~~~VyvGaNDGmLHaF~a~--G---~E~wAfiP~~~l~~L~~l~~~~y~~~~h~Y~VDG-----~p~~~Dv~~~g---- 149 (570)
T 3hx6_A 84 RAPRVYVGANDGMLHGFDTD--G---NETFAFIPSAVFEKMHKLTARGYQGGAHQFYVDG-----SPVVADAFFGG---- 149 (570)
T ss_dssp CCCEEEEECSSSCEEECCSS--C---CCCEEECCHHHHHHCC-------CCHHHHHHHHC-----CCEEEEEEETT----
T ss_pred CccEEEEECCCceEEEECCC--C---cEEEEECCHHHHHHHHHHhccCccccCcceecCC-----CCEEEEEEeCC----
Confidence 45789999999999999864 2 5678888887777554432110000000110000 00011111111
Q ss_pred cccCCCcccceeeeeccccCCCccEEEEecCCCCCCCCCcccccCceeEEeccccCcEEEEEEcCCCCEEE-EEe-----
Q 037288 202 CATDGGSVRHALITSLGSETTGGSIYALNLDNPLDIGPNFSIIRRSTMHLVASFKCTVWTADFCTNPSQAV-IGT----- 275 (513)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~g~~l~-s~s----- 275 (513)
..+.+++..++.+. ..+..+++.+|....-.|.+.... ..-.++.-.--.+.--.+++.++ .|+
T Consensus 150 ------~wrtvLvggmg~GG--~~~yALDVT~P~~p~~LWe~~~~~--~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~ 219 (570)
T 3hx6_A 150 ------AWHTVLIGSLRAGG--KGLFALDVTDPANIKLLWEIGVDQ--EPDLGYSFPKPTVARLHNGKWAVVTGNGYSSM 219 (570)
T ss_dssp ------EEEEEEEEECTTSC--SEEEEEECSSGGGCEEEEEEETTT--CTTCCBCCSCCEEEECTTSSEEEEEECCBSCT
T ss_pred ------cceEEEEEecCCCC--cEEEEEECCCCCCCceeEEECCCC--ccccCccccCCEEEEecCCCEEEEEccccCCC
Confidence 11334444443332 245556666654432223322100 00011111111233333667555 332
Q ss_pred -CC-eEEEEECCCCcEEEEeeeCC------CeEEEEE---ecCC--cEEEEEeCCCeEEEEECCCCc
Q 037288 276 -NL-GAAMVDMETGMASWVCRSKS------DILAQQV---IHSG--NVVLCGFRNGAIVTVDVRKRQ 329 (513)
Q Consensus 276 -~~-~i~vwd~~~~~~~~~~~~~~------~V~~l~~---~~~~--~~l~sg~~dg~i~iwd~~~~~ 329 (513)
++ .|.|.|+.+|..++.+.... .+..+.. +.|+ ..++.|...|.|.-+|+....
T Consensus 220 ~~~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 220 NDKAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGK 286 (570)
T ss_dssp TCCEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCSS
T ss_pred CCccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCCC
Confidence 12 38999999999888776321 2333332 2234 589999999999999998754
No 354
>2kcr_A Anntoxin; protein; NMR {Hyla annectans}
Probab=48.21 E-value=4.7 Score=27.16 Aligned_cols=17 Identities=18% Similarity=0.507 Sum_probs=13.5
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 19 ~~~r~yyd~~~~~C~~F 35 (61)
T 2kcr_A 19 SFTNYYYDKATSSCKTF 35 (61)
T ss_dssp CCCEEEEETTTTEEEEE
T ss_pred CeeEEEEeCCCCcceEE
Confidence 47889999999876554
No 355
>1xu1_R Tumor necrosis factor receptor superfamily member; TNFSF, cytokine, CRD, jelly-roll, cysteine-rich, H growth factor receptor complex; 1.90A {Homo sapiens} SCOP: g.24.1.2 PDB: 1xut_A
Probab=47.74 E-value=4.8 Score=24.38 Aligned_cols=13 Identities=23% Similarity=0.399 Sum_probs=9.4
Q ss_pred CccccccccCccc
Q 037288 6 PGFYYDAEKNRYF 18 (513)
Q Consensus 6 pg~y~d~~~~~yf 18 (513)
-|+|||+-.+.=-
T Consensus 8 qg~YwD~Ll~~Ci 20 (42)
T 1xu1_R 8 QGKFYDHLLRDCI 20 (42)
T ss_dssp GTEEEETTTTEEE
T ss_pred HHHHHHHHHHhhc
Confidence 4889998776543
No 356
>1y62_A Conkunitzin-S1; alpha helix, beta sheet, 310 helix, kunitz fold, toxin; 2.45A {Synthetic} PDB: 1yl2_A 2ca7_A 2j6d_A
Probab=46.19 E-value=3.3 Score=27.84 Aligned_cols=17 Identities=12% Similarity=0.434 Sum_probs=13.5
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 19 ~~~r~~yd~~~~~C~~F 35 (60)
T 1y62_A 19 AEKRIYYNSARKQCLRF 35 (60)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CeeEEEEeCCCCcccEe
Confidence 36889999999876555
No 357
>1irh_A Tissue factor pathway inhibitor; non-protease inhibitor, kunitz domain, protein binding; NMR {Homo sapiens} SCOP: g.8.1.1
Probab=45.55 E-value=5.7 Score=26.72 Aligned_cols=17 Identities=24% Similarity=0.512 Sum_probs=13.7
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 20 ~~~rw~yd~~~~~C~~F 36 (61)
T 1irh_A 20 NENRFYYNSVIGKCRPF 36 (61)
T ss_dssp CCCEEEECTTTCSEEEE
T ss_pred CeeEEEEeCCCCcceEE
Confidence 47899999999876554
No 358
>1kth_A Collagen alpha 3(VI) chain; anisotropic refinement, kunitz inhibitor, extracellular matrix, connective tissue, structural protein; 0.95A {Homo sapiens} SCOP: g.8.1.1 PDB: 1knt_A 1kun_A 2knt_A
Probab=44.90 E-value=3.5 Score=27.46 Aligned_cols=17 Identities=18% Similarity=0.366 Sum_probs=13.1
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+-
T Consensus 17 ~~~rw~yd~~~~~C~~F 33 (58)
T 1kth_A 17 FILKWYYDPNTKSCARF 33 (58)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CeeeEEEcCCCCcccee
Confidence 36789999999876544
No 359
>3byb_A Textilinin, textilinin-1; BPTI-like, beta hairpin, kunitz-type protease inhibitor, trypsin, plasmin, hydrolase inhibitor; 1.63A {Pseudonaja textilis textilis} PDB: 3d65_I
Probab=44.80 E-value=3.6 Score=27.54 Aligned_cols=17 Identities=24% Similarity=0.880 Sum_probs=13.1
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 19 ~~~rw~yn~~~~~C~~F 35 (59)
T 3byb_A 19 RFPSFYYNPDEKKCLEF 35 (59)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CeeEEEEECCCCEEeEE
Confidence 36889999999875444
No 360
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=44.72 E-value=1.8e+02 Score=26.43 Aligned_cols=137 Identities=5% Similarity=-0.097 Sum_probs=75.4
Q ss_pred EEcCCCCEEEEEe---CC--eEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeC-CCeEEEEECCCCcccccccc
Q 037288 263 DFCTNPSQAVIGT---NL--GAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFR-NGAIVTVDVRKRQRGCSSRA 336 (513)
Q Consensus 263 ~~s~~g~~l~s~s---~~--~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~ 336 (513)
.|++++..|+... ++ .|...++.......+..+.. .+|+++++.|+-.+. ...|.+.++....... +
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~-l-- 182 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL-F-- 182 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE-E--
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE-E--
Confidence 6677888887554 23 37777887555444444432 456778876665544 6788888876654321 0
Q ss_pred ccccCcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCCCCEEEEEecC--CeEEEEecCCCCccceEE
Q 037288 337 GRRHRIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLYDQYFLASSMD--GTVKLYDHRLTTRGAVQS 414 (513)
Q Consensus 337 ~~~h~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~s~d--g~i~lwd~~~~~~~~~~~ 414 (513)
+. ... .. .+.|++.+|+-...+ ..|..-++. ......
T Consensus 183 ~~------------------------------------~~~-~~-~~~P~g~~iy~t~~~~~~~I~~~~ld---G~~~~~ 221 (302)
T 3s25_A 183 YD------------------------------------CNC-YK-PVVLDDTNVYYMDVNRDNAIVHVNIN---NPNPVV 221 (302)
T ss_dssp EC------------------------------------SCE-EE-EEEEETTEEEEEEGGGTTEEEEECSS---SCCCEE
T ss_pred eC------------------------------------CCc-cc-eeeecCCEEEEEEcCCCcEEEEEECC---CCCeEE
Confidence 00 000 11 233677777766543 355555653 333444
Q ss_pred ecCCCCceeEEEEEEcCCCCEEEEEeC--CCcEEEEeCCCC
Q 037288 415 YEGHVNSHTRIQLGVDQSERFVMSGGE--DCKLRIWSIRSG 453 (513)
Q Consensus 415 ~~~h~~~v~~~~~~~s~~g~~l~sg~~--Dg~v~vwd~~~~ 453 (513)
+... .+ ..++|++++|+-+.. .+.|..-++...
T Consensus 222 Lt~~--~~----~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 222 LTEA--NI----EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp CSCS--CE----EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred EeCC--Cc----ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 4322 22 236778888876532 355666666543
No 361
>1g6x_A Pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 0.86A {Bos taurus} SCOP: g.8.1.1 PDB: 1k6u_A 1qlq_A 4tpi_I 1ld5_A 3btq_I 3bth_I 1t8m_B 5pti_A 1b0c_A 1bhc_A* 1bth_P 1bz5_A 1bzx_I 1cbw_D 1d0d_B 1eaw_B 1fy8_I 1mtn_D 1oa5_5 1oa6_5 ...
Probab=44.66 E-value=3.6 Score=27.41 Aligned_cols=17 Identities=12% Similarity=0.378 Sum_probs=13.2
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 17 ~~~rw~yd~~~~~C~~F 33 (58)
T 1g6x_A 17 RIIRYFYNAKAGLCQTF 33 (58)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CeeEEEEECCCCceeEE
Confidence 36889999999876544
No 362
>1dtx_A Alpha-dendrotoxin; presynaptic neurotoxin; 2.20A {Dendroaspis angusticeps} SCOP: g.8.1.1 PDB: 1dem_A 1den_A
Probab=42.69 E-value=4 Score=27.28 Aligned_cols=17 Identities=29% Similarity=0.767 Sum_probs=12.9
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 19 ~~~r~~yn~~~~~C~~F 35 (59)
T 1dtx_A 19 KIPAFYYNQKKKQCERF 35 (59)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CeeEEEEecCCCCCeEe
Confidence 36789999999875544
No 363
>1jc6_A Venom basic protease inhibitors IX and VIIIB; snake venom, kunitz inhibitor, neurotoxin, solution structure, BF IX, chymotrypsin inhibitor; NMR {Bungarus fasciatus} SCOP: g.8.1.1
Probab=42.57 E-value=6.5 Score=26.88 Aligned_cols=18 Identities=22% Similarity=0.635 Sum_probs=14.4
Q ss_pred CCCccccccccCcccccc
Q 037288 4 ELPGFYYDAEKNRYFPIK 21 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~~ 21 (513)
.+|-||||+++++=-+-.
T Consensus 19 ~~~r~yyd~~~~~C~~F~ 36 (65)
T 1jc6_A 19 LIPAFYYNSHLHKCQKFN 36 (65)
T ss_dssp CCCEEEEETTTTEEEEEC
T ss_pred CeeEEEEECCCCeeeeee
Confidence 478899999999876553
No 364
>3aub_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, hydrolase inhibitor; 1.00A {Bos taurus} PDB: 3aui_A 3auh_A 3ci7_A
Probab=42.57 E-value=4 Score=27.17 Aligned_cols=17 Identities=12% Similarity=0.356 Sum_probs=13.2
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|-||||+++++=-+.
T Consensus 17 ~~~rw~yn~~~~~C~~F 33 (58)
T 3aub_A 17 RIIRYFYNAAAGAAQAF 33 (58)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CeeeEEEECCCCceeEE
Confidence 46889999999875544
No 365
>1bun_B BETA2-bungarotoxin; hydrolase, presynaptic neurotoxin; 2.45A {Bungarus multicinctus} SCOP: g.8.1.1
Probab=42.24 E-value=4.1 Score=27.44 Aligned_cols=17 Identities=24% Similarity=0.561 Sum_probs=13.2
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 19 ~~~r~~yn~~~~~C~~F 35 (61)
T 1bun_B 19 VVRAFYYKPSAKRCVQF 35 (61)
T ss_dssp CEEEEEEEGGGTEEEEE
T ss_pred CeeEEEEECCCCcceEE
Confidence 36789999999876554
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.51 E-value=1.1e+02 Score=30.93 Aligned_cols=59 Identities=10% Similarity=0.022 Sum_probs=43.2
Q ss_pred CcEEEEEEcCCCCEEEEE-e------------CCeEEEEECCCCcEEEEeee--CCCeEEEEEecCCcEEEEEe
Q 037288 257 CTVWTADFCTNPSQAVIG-T------------NLGAAMVDMETGMASWVCRS--KSDILAQQVIHSGNVVLCGF 315 (513)
Q Consensus 257 ~~V~~~~~s~~g~~l~s~-s------------~~~i~vwd~~~~~~~~~~~~--~~~V~~l~~~~~~~~l~sg~ 315 (513)
.....|.|.++|.+.+.. . .+.+..++..+++...++.. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 467889999999877632 1 12466778888887766653 34689999999998877763
No 367
>1bf0_A Calcicludine; calcium channel blocker; NMR {Dendroaspis angusticeps} SCOP: g.8.1.1
Probab=41.39 E-value=4.3 Score=27.23 Aligned_cols=17 Identities=18% Similarity=0.675 Sum_probs=13.0
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 19 ~~~rw~yd~~~~~C~~F 35 (60)
T 1bf0_A 19 QFSSFYFKWTAKKCLPF 35 (60)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CeeEEEEeCCCCccEEe
Confidence 35789999999875544
No 368
>1aap_A Alzheimer'S disease amyloid A4 protein; proteinase inhibitor (trypsin); 1.50A {Homo sapiens} SCOP: g.8.1.1 PDB: 1taw_B 1brc_I 1zjd_B 3l3t_E 1ca0_D 3l33_E
Probab=39.02 E-value=5 Score=26.70 Aligned_cols=16 Identities=19% Similarity=0.698 Sum_probs=12.4
Q ss_pred CCccccccccCccccc
Q 037288 5 LPGFYYDAEKNRYFPI 20 (513)
Q Consensus 5 ~pg~y~d~~~~~yf~~ 20 (513)
+|.||||+++++=-+-
T Consensus 18 ~~rw~yd~~~~~C~~F 33 (58)
T 1aap_A 18 ISRWYFDVTEGKCAPF 33 (58)
T ss_dssp EEEEEEETTTTEEEEE
T ss_pred eeeEEEECCCCeEeee
Confidence 5789999999875544
No 369
>3m7q_B Kunitz-type proteinase inhibitor SHPI-1; trypsin-inhibitor complex, kunitz-type serine-protease inhib digestion, disulfide bond; 1.70A {Stichodactyla helianthus} SCOP: g.8.1.1 PDB: 3ofw_A 1shp_A 3t62_D 3uou_B
Probab=38.93 E-value=5 Score=27.01 Aligned_cols=15 Identities=40% Similarity=1.021 Sum_probs=11.9
Q ss_pred CCccccccccCcccc
Q 037288 5 LPGFYYDAEKNRYFP 19 (513)
Q Consensus 5 ~pg~y~d~~~~~yf~ 19 (513)
+|.||||+++++=-+
T Consensus 20 ~~rwyyd~~~~~C~~ 34 (61)
T 3m7q_B 20 FPRFYFDSETGKCTP 34 (61)
T ss_dssp EEEEEEETTTTEEEE
T ss_pred eeEEEEECCCCcEEe
Confidence 688999999886543
No 370
>1yc0_I Kunitz-type protease inhibitor 1; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens}
Probab=38.84 E-value=5.1 Score=28.36 Aligned_cols=17 Identities=24% Similarity=0.589 Sum_probs=13.4
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 34 ~~~rwyYd~~t~~C~~F 50 (75)
T 1yc0_I 34 SFPRWYYDPTEQICKSF 50 (75)
T ss_dssp BEEEEEEETTTTEEEEE
T ss_pred CeeEEEEECCCCeeeEe
Confidence 36889999999876554
No 371
>1zr0_B TFPI-2, tissue factor pathway inhibitor 2, PP5; serine protease, complex of serine protease/inhibitor, kunitz type inhibitor; 1.80A {Homo sapiens} SCOP: g.8.1.1
Probab=38.81 E-value=5.1 Score=27.21 Aligned_cols=17 Identities=24% Similarity=0.348 Sum_probs=13.0
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 21 ~~~rw~yd~~~~~C~~F 37 (63)
T 1zr0_B 21 LLLRYYYDRYTQSCRQF 37 (63)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CeeEEEEeCCCCeEEEE
Confidence 36889999999875443
No 372
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=36.73 E-value=95 Score=31.66 Aligned_cols=57 Identities=9% Similarity=0.001 Sum_probs=40.5
Q ss_pred cEEEEEEcCCCCEEEEEeC-------------CeEEEEECCCCcEEEEee--eCCCeEEEEEecCCcEEEEE
Q 037288 258 TVWTADFCTNPSQAVIGTN-------------LGAAMVDMETGMASWVCR--SKSDILAQQVIHSGNVVLCG 314 (513)
Q Consensus 258 ~V~~~~~s~~g~~l~s~s~-------------~~i~vwd~~~~~~~~~~~--~~~~V~~l~~~~~~~~l~sg 314 (513)
..--|+|++.|.+++.-.. +.+.+.+..+++...++. ..++++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3456889999996654321 235666778888777665 34569999999999877665
No 373
>1adz_A TFPI, EPI, LACI, tissue factor pathway inhibitor; hydrolase, coagulation; NMR {Homo sapiens} SCOP: g.8.1.1
Probab=36.42 E-value=9.2 Score=26.66 Aligned_cols=17 Identities=6% Similarity=0.372 Sum_probs=13.8
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|-||||+++++=-+-
T Consensus 26 ~~~r~yyn~~t~~C~~F 42 (71)
T 1adz_A 26 YITRYFYNNQTKQCERF 42 (71)
T ss_dssp CCCEEEEEGGGTEEEEE
T ss_pred ceeeEEEcCCCCccceE
Confidence 47889999999987554
No 374
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.04 E-value=1.1e+02 Score=31.10 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=40.6
Q ss_pred EEEcCCCCEEEEEeCC------------CcEEEEeCCCCeEEEEecCC-CCCeEEEEEcCC-CceEEeeCCC
Q 037288 427 LGVDQSERFVMSGGED------------CKLRIWSIRSGELVFEDKFS-NSVPSAVCWRTQ-RSMGPQIEGK 484 (513)
Q Consensus 427 ~~~s~~g~~l~sg~~D------------g~v~vwd~~~~~~~~~~~~~-~~~v~~v~~~p~-~~~~~t~~~~ 484 (513)
+.|+|.|+++++-..+ ..+.+.+..++++...+... .+.++.++|+|+ ..+|+....-
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQHP 552 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEECC
Confidence 7899999966653322 24566677788876665543 567999999999 5677775433
No 375
>1co7_I BPTI, bovine pancreatic trypsin inhibitor; complex (serine protease/inhibitor), hydrolase/hydrolase inhibitor complex; 1.90A {Bos taurus} SCOP: g.8.1.1
Probab=32.49 E-value=6.9 Score=29.40 Aligned_cols=17 Identities=12% Similarity=0.378 Sum_probs=9.7
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|.||||+++++=-+.
T Consensus 51 ~~~rw~yd~~~~~C~~F 67 (99)
T 1co7_I 51 RIIRYFYNAKAGLCQTF 67 (99)
T ss_dssp CEEEEEET----TEEEE
T ss_pred ceeEEEEECCCCceeEE
Confidence 36889999999986554
No 376
>3aug_A BPTI, bovine pancreatic trypsin inhibitor; serine protease inhibitor, inhibits serine protease, trypsin hydrolase inhibitor; 1.40A {Bos taurus} PDB: 3aue_A 3auc_A 3aud_A 1f7z_I 1f5r_I 3tgi_I 3tgj_I 3tgk_I
Probab=32.48 E-value=7.4 Score=26.60 Aligned_cols=17 Identities=12% Similarity=0.356 Sum_probs=13.2
Q ss_pred CCCccccccccCccccc
Q 037288 4 ELPGFYYDAEKNRYFPI 20 (513)
Q Consensus 4 ~~pg~y~d~~~~~yf~~ 20 (513)
.+|-||||+++++=-+.
T Consensus 17 ~~~rwyyd~~t~~C~~F 33 (65)
T 3aug_A 17 RIIRYFYNAAAGAAQAF 33 (65)
T ss_dssp CEEEEEEETTTTEEEEE
T ss_pred CeeEEEEECCCCeeeeE
Confidence 46789999999886544
No 377
>4dtg_K Tissue factor pathway inhibitor; antibody, blood coagulation, blood clotting inhib immune system complex; HET: MES PGE; 1.80A {Homo sapiens} PDB: 1tfx_C
Probab=31.95 E-value=7.6 Score=26.64 Aligned_cols=16 Identities=6% Similarity=0.451 Sum_probs=12.6
Q ss_pred CCccccccccCccccc
Q 037288 5 LPGFYYDAEKNRYFPI 20 (513)
Q Consensus 5 ~pg~y~d~~~~~yf~~ 20 (513)
+|-||||+++++=-+.
T Consensus 20 ~~rwyyd~~t~~C~~F 35 (66)
T 4dtg_K 20 ITRYFYNNQTKQCERF 35 (66)
T ss_dssp EEEEEEETTTTEEEEE
T ss_pred eeEEEEECCCCCEEee
Confidence 6789999999876444
No 378
>2ddi_A WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1; kunitz domain, protein binding; NMR {Homo sapiens} PDB: 2ddj_A
Probab=31.90 E-value=7.6 Score=26.99 Aligned_cols=16 Identities=19% Similarity=0.399 Sum_probs=13.0
Q ss_pred CCccccccccCccccc
Q 037288 5 LPGFYYDAEKNRYFPI 20 (513)
Q Consensus 5 ~pg~y~d~~~~~yf~~ 20 (513)
+|-||||+++++=-+-
T Consensus 23 ~~rwyYd~~t~~C~~F 38 (70)
T 2ddi_A 23 EPRWAYSPLLQQCHPF 38 (70)
T ss_dssp EEEEEEEGGGTEEEEE
T ss_pred eeEEEEECCCCeeeee
Confidence 5789999999886655
No 379
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=30.44 E-value=13 Score=20.77 Aligned_cols=7 Identities=43% Similarity=1.331 Sum_probs=5.9
Q ss_pred ccccccc
Q 037288 7 GFYYDAE 13 (513)
Q Consensus 7 g~y~d~~ 13 (513)
||||.|.
T Consensus 23 GF~~~p~ 29 (30)
T 1m5a_B 23 GFFYTPK 29 (30)
T ss_dssp CEEECCC
T ss_pred ccccCCC
Confidence 8999983
No 380
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=29.70 E-value=4e+02 Score=25.95 Aligned_cols=51 Identities=8% Similarity=-0.053 Sum_probs=34.3
Q ss_pred CcEEEEEEcCCCC--EEEEEeCCeEEEEECCCCc---EEEEee---e-------CCCeEEEEEecC
Q 037288 257 CTVWTADFCTNPS--QAVIGTNLGAAMVDMETGM---ASWVCR---S-------KSDILAQQVIHS 307 (513)
Q Consensus 257 ~~V~~~~~s~~g~--~l~s~s~~~i~vwd~~~~~---~~~~~~---~-------~~~V~~l~~~~~ 307 (513)
..-+.++|.|+|. ++++-..+.|++++..... .+.-+. . ....+.|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4668999999985 7877777789998754321 111111 1 345889999996
No 381
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=29.46 E-value=1.8e+02 Score=29.46 Aligned_cols=59 Identities=12% Similarity=0.109 Sum_probs=41.0
Q ss_pred EEEEcCCCCEEEEEeC------------CCcEEEEeCCCCeEEEEecCC-CCCeEEEEEcCC-CceEEeeCCC
Q 037288 426 QLGVDQSERFVMSGGE------------DCKLRIWSIRSGELVFEDKFS-NSVPSAVCWRTQ-RSMGPQIEGK 484 (513)
Q Consensus 426 ~~~~s~~g~~l~sg~~------------Dg~v~vwd~~~~~~~~~~~~~-~~~v~~v~~~p~-~~~~~t~~~~ 484 (513)
.+.|+++|.+.++... .+.|..++..++++...+... ...++.++|+|+ ..+|++...-
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCC
Confidence 3889999987773221 225777787788876665433 456899999999 5677776543
No 382
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=27.11 E-value=17 Score=23.68 Aligned_cols=10 Identities=40% Similarity=0.840 Sum_probs=8.0
Q ss_pred CccccccccC
Q 037288 6 PGFYYDAEKN 15 (513)
Q Consensus 6 pg~y~d~~~~ 15 (513)
=||-|||+++
T Consensus 9 CGyvYd~~~G 18 (54)
T 4rxn_A 9 CGYIYDPEDG 18 (54)
T ss_dssp TCCEECTTTC
T ss_pred CCeEECCCcC
Confidence 4899999875
No 383
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=26.41 E-value=17 Score=22.77 Aligned_cols=11 Identities=27% Similarity=0.631 Sum_probs=8.3
Q ss_pred CccccccccCc
Q 037288 6 PGFYYDAEKNR 16 (513)
Q Consensus 6 pg~y~d~~~~~ 16 (513)
=||-||||+.-
T Consensus 10 CGyvyd~~~Gd 20 (46)
T 6rxn_A 10 CGYEYDPAEHD 20 (46)
T ss_dssp TCCEECGGGGT
T ss_pred CCeEEeCCcCC
Confidence 48899988763
No 384
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=25.76 E-value=17 Score=24.71 Aligned_cols=9 Identities=22% Similarity=0.722 Sum_probs=7.0
Q ss_pred cccccccCc
Q 037288 8 FYYDAEKNR 16 (513)
Q Consensus 8 ~y~d~~~~~ 16 (513)
|+|||++|.
T Consensus 43 ykyde~tNe 51 (72)
T 3kvp_A 43 YEYNESRNE 51 (72)
T ss_dssp EEEETTTTE
T ss_pred EEeCCCCCe
Confidence 788888775
No 385
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=24.97 E-value=4.5e+02 Score=24.90 Aligned_cols=185 Identities=9% Similarity=-0.004 Sum_probs=99.6
Q ss_pred eEEEEECCCC--cEEEEeee-------CCCeEEEEEe---cC----CcEEEEEe-CCCeEEEEECCCCcccccccccccc
Q 037288 278 GAAMVDMETG--MASWVCRS-------KSDILAQQVI---HS----GNVVLCGF-RNGAIVTVDVRKRQRGCSSRAGRRH 340 (513)
Q Consensus 278 ~i~vwd~~~~--~~~~~~~~-------~~~V~~l~~~---~~----~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~h 340 (513)
.|.+||+.++ +.++.+.- .+.+..+.+. ++ +.+++.+. ..+-|.|+|+.+++... .+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swR---v~~~~ 200 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWN---VTHPT 200 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEE---EECGG
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEE---EccCC
Confidence 3778999999 88777652 2347788887 22 34555554 47889999999887533 11110
Q ss_pred CcCeEEEeeCCeEEEeEeecccCcccceeEeecCCCceEEEEEcCC----CCEEEEEecCCeEEEEec-----CCCCc-c
Q 037288 341 RIPYSRLQRNDRVTNEQWFELKANIWPSHTTFMPSSISCLQSLQLY----DQYFLASSMDGTVKLYDH-----RLTTR-G 410 (513)
Q Consensus 341 ~~~v~~v~~~~~~~s~~w~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~l~s~s~dg~i~lwd~-----~~~~~-~ 410 (513)
-.+-....+ ......+.....+..+ +++|+ ++.|.-....+. ++|.+ +.... .
T Consensus 201 ~~pd~~~~~---------------~i~G~~~~~~~Gi~gI-aLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~ 263 (381)
T 3q6k_A 201 FKAERPTKF---------------DYGGKEYEFKAGIFGI-TLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKL 263 (381)
T ss_dssp GSCCSCEEE---------------EETTEEEEECCCEEEE-EECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCC
T ss_pred CccccCcce---------------EECCEEeEeccCceEE-EecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhh
Confidence 000000000 0001122223445554 77777 677777666542 34433 21111 1
Q ss_pred ceEEecCCCCc-eeEEEEEEc-CCCCEEEEEeCCCcEEEEeCCC-C---eEEEEe--cCCCCCeEEEEEcCCCceEEeeC
Q 037288 411 AVQSYEGHVNS-HTRIQLGVD-QSERFVMSGGEDCKLRIWSIRS-G---ELVFED--KFSNSVPSAVCWRTQRSMGPQIE 482 (513)
Q Consensus 411 ~~~~~~~h~~~-v~~~~~~~s-~~g~~l~sg~~Dg~v~vwd~~~-~---~~~~~~--~~~~~~v~~v~~~p~~~~~~t~~ 482 (513)
.++.+ |..++ -.+..++++ .+|.++++--....|..|+..+ . +....+ ...-..+..+.+.+++.+.+.++
T Consensus 264 ~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 264 NPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred ceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 22222 22221 122336776 6777777777888999999876 1 112222 12334578899888876666665
Q ss_pred C
Q 037288 483 G 483 (513)
Q Consensus 483 ~ 483 (513)
+
T Consensus 343 ~ 343 (381)
T 3q6k_A 343 G 343 (381)
T ss_dssp S
T ss_pred c
Confidence 5
No 386
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=23.83 E-value=22 Score=22.94 Aligned_cols=10 Identities=40% Similarity=0.743 Sum_probs=7.7
Q ss_pred CccccccccC
Q 037288 6 PGFYYDAEKN 15 (513)
Q Consensus 6 pg~y~d~~~~ 15 (513)
=||-|||+++
T Consensus 9 CGyvYd~~~G 18 (52)
T 1e8j_A 9 CGYEYDPAKG 18 (52)
T ss_dssp SCCCCCTTTC
T ss_pred CCeEEcCCcC
Confidence 3888998874
No 387
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.74 E-value=2.4e+02 Score=21.05 Aligned_cols=55 Identities=5% Similarity=-0.137 Sum_probs=28.0
Q ss_pred EEEEEEcCCCCEEEEEeCCeEEEEECCCCcEEEEeeeCCCeEEEEEecCCcEEEEEeCCCeEEEEE
Q 037288 259 VWTADFCTNPSQAVIGTNLGAAMVDMETGMASWVCRSKSDILAQQVIHSGNVVLCGFRNGAIVTVD 324 (513)
Q Consensus 259 V~~~~~s~~g~~l~s~s~~~i~vwd~~~~~~~~~~~~~~~V~~l~~~~~~~~l~sg~~dg~i~iwd 324 (513)
-..+.+..||.+++...++ +|...+.. ...-..+.+..+|++++... ++.+.+|.
T Consensus 21 ~~~L~~q~dGnLvl~~~~~---vW~snt~~-------~~~~~~l~l~~dGNLVl~~~-~~~~~vW~ 75 (111)
T 3mez_A 21 SAAFVMQGDCNLVLYNEAG---GFQSNTHG-------RGVDCTLRLNNRGQLEIHSA-NSNTPVWV 75 (111)
T ss_dssp TEEEEECTTSCEEEECSSC---CEECCCTT-------SCSSCEEEECTTSCEEEECS-SCSSCSEE
T ss_pred CEEEEEccCCeEEEECCCC---EEECCccc-------CCcCEEEEEcCCCcEEEEeC-CCCEEEEE
Confidence 3456666777776654333 67655431 11113455666777665532 23333553
No 388
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=21.82 E-value=97 Score=33.74 Aligned_cols=35 Identities=14% Similarity=0.072 Sum_probs=29.6
Q ss_pred CeEEEEEecCCcEEEEEeCCCeEEEEECCCCcccc
Q 037288 298 DILAQQVIHSGNVVLCGFRNGAIVTVDVRKRQRGC 332 (513)
Q Consensus 298 ~V~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 332 (513)
.+.++...++..++++-+.|+++++|++.+++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 46777777788899999999999999999987643
No 389
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=20.72 E-value=27 Score=22.56 Aligned_cols=9 Identities=33% Similarity=1.029 Sum_probs=7.0
Q ss_pred ccccccccC
Q 037288 7 GFYYDAEKN 15 (513)
Q Consensus 7 g~y~d~~~~ 15 (513)
||-||+++.
T Consensus 9 GyvYd~~~G 17 (52)
T 1yk4_A 9 GYIYDEDEG 17 (52)
T ss_dssp SCEEETTTC
T ss_pred CeEECCCcC
Confidence 788888764
Done!