RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 037294
         (161 letters)



>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum
           aestivum) [TaxId: 4565]}
          Length = 150

 Score =  131 bits (331), Expect = 1e-40
 Identities = 89/151 (58%), Positives = 116/151 (76%), Gaps = 4/151 (2%)

Query: 11  RTSNIFDPLSPDIWDPFQDLPFSSLSLSAPRSDLSTETAALANTRIDWRETPEAHIFKAD 70
           R SN+FDP +    DPF        S+    S   +ETAA AN R+DW+ETPEAH+FKAD
Sbjct: 4   RRSNVFDPFADLWADPFDTFR----SIVPAISGGGSETAAFANARMDWKETPEAHVFKAD 59

Query: 71  LPGMRKDEVKVEIEEGNVLRISGERRKEVEERSDTWHRVERSSGQFLRRFRLPENARIDQ 130
           LPG++K+EVKVE+E+GNVL +SGER KE E+++D WHRVERSSG+F+RRFRL E+A++++
Sbjct: 60  LPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEE 119

Query: 131 VKASTEYGVLTVTVPKVIADRPDVRAIEISG 161
           VKA  E GVLTVTVPK    +P+V+AI+ISG
Sbjct: 120 VKAGLENGVLTVTVPKAEVKKPEVKAIQISG 150


>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon
           Methanococcus jannaschii [TaxId: 2190]}
          Length = 115

 Score = 81.2 bits (200), Expect = 3e-21
 Identities = 21/114 (18%), Positives = 40/114 (35%)

Query: 45  STETAALANTRIDWRETPEAHIFKADLPGMRKDEVKVEIEEGNVLRISGERRKEVEERSD 104
             + +      I   E  +     A LPG+ K+++ +      +   +      + E   
Sbjct: 2   GIQISGKGFMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESER 61

Query: 105 TWHRVERSSGQFLRRFRLPENARIDQVKASTEYGVLTVTVPKVIADRPDVRAIE 158
             +       +  R  +LP   + +   A  E GVL+V +PK  +       IE
Sbjct: 62  IIYSEIPEEEEIYRTIKLPATVKEENASAKFENGVLSVILPKAESSIKKGINIE 115


>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 92

 Score = 25.7 bits (56), Expect = 1.2
 Identities = 9/59 (15%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 52  ANTRIDWRETPEAHIFKADLPGMRKDEVKVEIEEGNV-LRISGERRKEVEERSDTWHRV 109
           +  + DW +T    +    +  ++K++V VE  E  +   +     ++   + +  H +
Sbjct: 1   SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPI 59


>d1gjja1 a.140.1.1 (A:1-50) Thymopoietin, LAP2 {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 50

 Score = 24.5 bits (53), Expect = 1.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 67 FKADLPGMRKDEVKVEIEEGNVLRISGERRKEV 99
          F  D   + KD++K E+   NV   +GE+RK+V
Sbjct: 4  FLEDPSVLTKDKLKSELVANNVTLPAGEQRKDV 36


>d2p84a1 b.172.1.1 (A:3-135) Orf041 product {Staphylococcus phage 37
           [TaxId: 320840]}
          Length = 133

 Score = 24.2 bits (52), Expect = 6.2
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 76  KDEVKVEIEEGNVLRISGERRKEVEERSDTW 106
           KD+   EI E +++R        VE    ++
Sbjct: 63  KDKNVKEIYESDIVRNLYGELYVVEWLDGSF 93


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.134    0.391 

Gapped
Lambda     K      H
   0.267   0.0639    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 621,605
Number of extensions: 27414
Number of successful extensions: 64
Number of sequences better than 10.0: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 10
Length of query: 161
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 83
Effective length of database: 1,336,656
Effective search space: 110942448
Effective search space used: 110942448
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (22.8 bits)