BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037296
(490 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1USW|A Chain A, Crystal Structure Of Ferulic Acid Esterase From
Aspergillus Niger
Length = 260
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 16/129 (12%)
Query: 273 NDCIPPGKMELTAYYAVKNKLKSLLEEHKKA----KFVVTGHSLGGALAILFPTVLVLHD 328
NDC G + + +V+++++SL+++ VTGHSLG ++A L
Sbjct: 92 NDCEVHGGYYI-GWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAA------ 144
Query: 329 EMEIMHSLLGVYTFGQPRIGNERIGRFMKA--HLESP-VQKYFRVVYCNDMVPRLPYDDK 385
++ + + +YTFG+PR GN+ +M + SP +YFRV + ND +P LP D+
Sbjct: 145 QLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPADE 204
Query: 386 TFSYKHFGV 394
Y H GV
Sbjct: 205 --GYAHGGV 211
>pdb|2BJH|A Chain A, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|B Chain B, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|C Chain C, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
Length = 260
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 16/129 (12%)
Query: 273 NDCIPPGKMELTAYYAVKNKLKSLLEEHKKA----KFVVTGHSLGGALAILFPTVLVLHD 328
NDC G + + +V+++++SL+++ VTGH+LG ++A L
Sbjct: 92 NDCEVHGGYYI-GWISVQDQVESLVKQQASQYPDYALTVTGHALGASMAALTAA------ 144
Query: 329 EMEIMHSLLGVYTFGQPRIGNERIGRFMKA--HLESP-VQKYFRVVYCNDMVPRLPYDDK 385
++ + + +YTFG+PR GN+ +M + SP +YFRV + ND +P LP D+
Sbjct: 145 QLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPADE 204
Query: 386 TFSYKHFGV 394
Y H GV
Sbjct: 205 --GYAHGGV 211
>pdb|1UWC|A Chain A, Feruloyl Esterase From Aspergillus Niger
pdb|1UWC|B Chain B, Feruloyl Esterase From Aspergillus Niger
pdb|1UZA|A Chain A, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
pdb|1UZA|B Chain B, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
Length = 261
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 16/129 (12%)
Query: 273 NDCIPPGKMELTAYYAVKNKLKSLLEEHKKA----KFVVTGHSLGGALAILFPTVLVLHD 328
NDC G + + +V+++++SL+++ VTGHSLG ++A L
Sbjct: 92 NDCEVHGGYYI-GWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAA------ 144
Query: 329 EMEIMHSLLGVYTFGQPRIGNERIGRFMKA--HLESP-VQKYFRVVYCNDMVPRLPYDDK 385
++ + + +YTFG+PR GN+ +M + SP +YFRV + ND +P LP ++
Sbjct: 145 QLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQ 204
Query: 386 TFSYKHFGV 394
Y H GV
Sbjct: 205 --GYAHGGV 211
>pdb|2HL6|A Chain A, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2HL6|B Chain B, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2IX9|A Chain A, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
pdb|2IX9|B Chain B, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
Length = 260
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 16/129 (12%)
Query: 273 NDCIPPGKMELTAYYAVKNKLKSLLEEHKKA----KFVVTGHSLGGALAILFPTVLVLHD 328
NDC G + + +V+++++SL+++ VTGHSLG ++A L
Sbjct: 92 NDCEVHGGYYI-GWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAA------ 144
Query: 329 EMEIMHSLLGVYTFGQPRIGNERIGRFMKA--HLESP-VQKYFRVVYCNDMVPRLPYDDK 385
++ + + +YTFG+PR GN+ +M + SP +YFRV + ND +P LP ++
Sbjct: 145 QLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQ 204
Query: 386 TFSYKHFGV 394
Y H GV
Sbjct: 205 --GYAHGGV 211
>pdb|1DT3|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT3|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|E Chain E, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|F Chain F, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|G Chain G, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|H Chain H, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DU4|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1EIN|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1TIB|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|4DYH|A Chain A, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4DYH|B Chain B, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4EA6|A Chain A, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4EA6|B Chain B, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4FLF|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4FLF|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4GBG|A Chain A, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GBG|B Chain B, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GI1|A Chain A, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GI1|B Chain B, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GLB|A Chain A, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GLB|B Chain B, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GWL|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GWL|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GHW|A Chain A, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
pdb|4GHW|B Chain B, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
Length = 269
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 289 VKNKLKSLLEEHKKAKFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLGVYTFGQPRIG 348
++ K++ + EH + V TGHSLGGALA V ++ + V+++G PR+G
Sbjct: 124 LRQKVEDAVREHPDYRVVFTGHSLGGALAT------VAGADLRGNGYDIDVFSYGAPRVG 177
Query: 349 NERIGRFMKAHLESPVQKYFRVVYCNDMVPRLPYDDKTFSYKH 391
N F+ + +R+ + ND+VPRLP + F Y H
Sbjct: 178 NRAFAEFLTVQTGGTL---YRITHTNDIVPRLP--PREFGYSH 215
>pdb|1GT6|A Chain A, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
pdb|1GT6|B Chain B, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 289 VKNKLKSLLEEHKKAKFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLGVYTFGQPRIG 348
++ K++ + EH + V TGH+LGGALA V ++ + V+++G PR+G
Sbjct: 124 LRQKVEDAVREHPDYRVVFTGHALGGALAT------VAGADLRGNGYDIDVFSYGAPRVG 177
Query: 349 NERIGRFMKAHLESPVQKYFRVVYCNDMVPRLPYDDKTFSYKH 391
N F+ + +R+ + ND+VPRLP + F Y H
Sbjct: 178 NRAFAEFLTVQTGGTL---YRITHTNDIVPRLP--PREFGYSH 215
>pdb|1TIC|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1TIC|B Chain B, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1LGY|A Chain A, Lipase Ii From Rhizopus Niveus
pdb|1LGY|B Chain B, Lipase Ii From Rhizopus Niveus
pdb|1LGY|C Chain C, Lipase Ii From Rhizopus Niveus
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 85/204 (41%), Gaps = 54/204 (26%)
Query: 191 KDATLILISFRGTEPFDADDWCTDFDYSWYEIPKLGKVHMGFLEALGLGNRADTVTFQNH 250
K T+ L+ FRGT F + F++S Y+ K KVH GFL
Sbjct: 72 KQKTIYLV-FRGTNSFRSAITDIVFNFSDYKPVKGAKVHAGFL----------------- 113
Query: 251 LLGKEAKFRDRSSDSEELPSTGNDCIPPGKMELTAYYAVKNKLKSLLEEHKKAKFVVTGH 310
S E++ ND P + +LTA H K +VTGH
Sbjct: 114 ------------SSYEQVV---NDYFPVVQEQLTA--------------HPTYKVIVTGH 144
Query: 311 SLGGALAILFPTVLVLHDEMEIMHSLLGVYTFGQPRIGNERIGRFMKAHLESPVQKYFRV 370
SLGGA A+L L E + L ++T G PR+GN + +ES + R
Sbjct: 145 SLGGAQALLAGMDL-YQREPRLSPKNLSIFTVGGPRVGNPTFAYY----VESTGIPFQRT 199
Query: 371 VYCNDMVPRLPYDDKTFSYKHFGV 394
V+ D+VP +P ++F + H GV
Sbjct: 200 VHKRDIVPHVP--PQSFGFLHPGV 221
>pdb|3NGM|A Chain A, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|B Chain B, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|C Chain C, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|D Chain D, Crystal Structure Of Lipase From Gibberella Zeae
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 304 KFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLGVYTFGQPRIGNERIGRFMKAHLESP 363
K V GHSLGGA+A L + I + L +YT+G PR+GN ++ F + +
Sbjct: 137 KVVSVGHSLGGAVATLAGA------NLRIGGTPLDIYTYGSPRVGNTQLAAF----VSNQ 186
Query: 364 VQKYFRVVYCNDMVPRLPYDDKTFSYKH 391
FRV D VPRLP F Y+H
Sbjct: 187 AGGEFRVTNAKDPVPRLP--PLIFGYRH 212
>pdb|5TGL|A Chain A, A Model For Interfacial Activation In Lipases From The
Structure Of A Fungal Lipase-Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 283 LTAYYAVKNKL-KSLLEEHKKA---KFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLG 338
L +Y V+N+L ++L++ K+ K VTGHSLGGA A+L L +E + S L
Sbjct: 112 LDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQREE-GLSSSNLF 170
Query: 339 VYTFGQPRIGNERIGRFMKAHLESPVQKYFRVVYCNDMVPRLPYDDKTFSYKHFG 393
+YT GQPR+GN ++ S Y R V D+VP LP F + H G
Sbjct: 171 LYTQGQPRVGNPAFANYVV----STGIPYRRTVNERDIVPHLP--PAAFGFLHAG 219
>pdb|4TGL|A Chain A, Catalysis At The Interface: The Anatomy Of A
Conformational Change In A Triglyceride Lipase
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 283 LTAYYAVKNKL-KSLLEEHKKA---KFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLG 338
L +Y V+N+L ++L++ K+ K VTGHSLGGA A+L L +E + S L
Sbjct: 112 LDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQREE-GLSSSNLF 170
Query: 339 VYTFGQPRIGNERIGRFMKAHLESPVQKYFRVVYCNDMVPRLPYDDKTFSYKHFG 393
+YT GQPR+GN ++ S Y R V D+VP LP F + H G
Sbjct: 171 LYTQGQPRVGNPAFANYVV----STGIPYRRTVNERDIVPHLP--PAAFGFLHAG 219
>pdb|1TGL|A Chain A, A Serine Protease Triad Forms The Catalytic Centre Of A
Triacylglycerol Lipase
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 283 LTAYYAVKNKL-KSLLEEHKKA---KFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLG 338
L +Y V+N+L ++L++ K+ K VTGHSLGGA A+L L +E + S L
Sbjct: 112 LDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQREE-GLSSSNLF 170
Query: 339 VYTFGQPRIGNERIGRFMKAHLESPVQKYFRVVYCNDMVPRLPYDDKTFSYKHFG 393
+YT GQPR+GN ++ S Y R V D+VP LP F + H G
Sbjct: 171 LYTQGQPRVGNPAFANYVV----STGIPYRRTVNERDIVPHLP--PAAFGFLHAG 219
>pdb|3O0D|A Chain A, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|B Chain B, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|C Chain C, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|D Chain D, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|E Chain E, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|F Chain F, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|G Chain G, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 23/120 (19%)
Query: 284 TAYYAVKNKLKSLLEEHKKAKFVVTGHSLGGALAILFPTVLVL--HDEMEIMHSLLGVYT 341
Y + KL S++E++ + VTGHSLGGA A+LF L + HD + V T
Sbjct: 135 NTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLKVNGHDPL--------VVT 186
Query: 342 FGQPRIGNERIGRFMKAHL---ESP-------VQKYFRVVYCNDMVPRLPYDDKTFSYKH 391
GQP +GN ++ E+P +K +R+ + D+VP++P+ D Y+H
Sbjct: 187 LGQPIVGNAGFANWVDKLFFGQENPDVSKVSKDRKLYRITHRGDIVPQVPFWD---GYQH 243
>pdb|1TIA|A Chain A, An Unusual Buried Polar Cluster In A Family Of Fungal
Lipases
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 292 KLKSLLEEHKKAKFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLGVYTFGQPRIGNER 351
+LK ++ ++ + VV GHSLG A+A L T D + +Y + PR+GN
Sbjct: 126 ELKEVVAQNPNYELVVVGHSLGAAVATLAAT-----DLRGKGYPSAKLYAYASPRVGNAA 180
Query: 352 IGRFMKAHLESPVQKYFRVVYCNDMVPRLP 381
+ +++ A + FR + ND VP+LP
Sbjct: 181 LAKYITAQGNN-----FRFTHTNDPVPKLP 205
>pdb|3TGL|A Chain A, Structure And Molecular Model Refinement Of Rhizomucor
Miehei Triacylglyceride Lipase: A Case Study Of The Use
Of Simulated Annealing In Partial Model Refinement
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 283 LTAYYAVKNKL-KSLLEEHKKA---KFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLG 338
L +Y V+N+L ++L++ K+ K VTGHSLGGA +L L +E + S L
Sbjct: 112 LDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATVLLCALDLYQREE-GLSSSNLF 170
Query: 339 VYTFGQPRIGNERIGRFMKAHLESPVQKYFRVVYCNDMVPRLPYDDKTFSYKHFG 393
+YT GQPR+G+ ++ S Y R V D+VP LP F + H G
Sbjct: 171 LYTQGQPRVGDPAFANYVV----STGIPYRRTVNERDIVPHLP--PAAFGFLHAG 219
>pdb|3UUF|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 304 KFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLGVYTFGQPRIGNERIGRFMKAHLESP 363
+ V GHSLG A+ +L + E+ + L Y FG PR+GN F+ +
Sbjct: 138 RVTVIGHSLGAAMGLL----CAMDIELRMDGGLYKTYLFGLPRLGNPTFASFVDQKIGD- 192
Query: 364 VQKYFRVVYCNDMVPRLPYDDKTFSYKH 391
K+ ++ D VP +P + Y+H
Sbjct: 193 --KFHSIINGRDWVPTVP--PRALGYQH 216
>pdb|3UUE|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 304 KFVVTGHSLGGALAILFPTVLVLHDEMEIMHSLLGVYTFGQPRIGNERIGRFMKAHLESP 363
+ V GHSLG A+ +L + E+ + L Y FG PR+GN F+ +
Sbjct: 139 RVTVIGHSLGAAMGLL----CAMDIELRMDGGLYKTYLFGLPRLGNPTFASFVDQKIGD- 193
Query: 364 VQKYFRVVYCNDMVPRLPYDDKTFSYKH 391
K+ ++ D VP +P + Y+H
Sbjct: 194 --KFHSIINGRDWVPTVP--PRALGYQH 217
>pdb|2YIJ|A Chain A, Crystal Structure Of Phospholipase A1
pdb|2YIJ|B Chain B, Crystal Structure Of Phospholipase A1
Length = 419
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 44/195 (22%)
Query: 196 ILISFRGT-EPFDADDWCTDFDYSWYEIPKLGKVHMGFLEALGL-GNRADTVTFQNHLLG 253
I++S+RG+ +P + W DF++ G + A+ + G R D V
Sbjct: 149 IVVSWRGSVQPLE---WVEDFEF-------------GLVNAIKIFGERNDQVQIH----- 187
Query: 254 KEAKFRDRSSDSEELPSTGNDCIPPGKMELTAYYAVKNKLKSLLEEHKKAKFVVT--GHS 311
+ + S E P T + A V ++ LLE++K + +T GHS
Sbjct: 188 -QGWYSIYXSQDERSPFT----------KTNARDQVLREVGRLLEKYKDEEVSITICGHS 236
Query: 312 LGGALAILFPTVLVLH-----DEMEIMHSLLGVYTFGQPRIGNERIGRFMKAHLESPVQK 366
LG ALA L T +V + + + F PR+G+ R + + LE +
Sbjct: 237 LGAALATLSATDIVANGYNRPKSRPDKSCPVTAFVFASPRVGDSDF-RKLFSGLED--IR 293
Query: 367 YFRVVYCNDMVPRLP 381
R D++P P
Sbjct: 294 VLRTRNLPDVIPIYP 308
>pdb|2OHF|A Chain A, Crystal Structure Of Human Ola1 In Complex With Amppcp
Length = 396
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 96 IGQLDGRIDLYKG-QYLTEQLRYSDVGQSGIEMELVNRILMDLCIMASKLAYENAEVVRN 154
I ++G +D + + + E+L+ D G ++ + ++ + K Y+ V++
Sbjct: 132 ITHVEGSVDPIRDIEIIHEELQLKDEEMIGPIIDKLEKVAVRGGDKKLKPEYDIMCKVKS 191
Query: 155 VVVDHWKQMHFVDFYNCWNDFEKEMSTQVFILTDKP 190
V+D K V FY+ WND E E+ + LT KP
Sbjct: 192 WVIDQKKP---VRFYHDWNDKEIEVLNKHLFLTSKP 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.141 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,086,882
Number of Sequences: 62578
Number of extensions: 659869
Number of successful extensions: 1265
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1227
Number of HSP's gapped (non-prelim): 24
length of query: 490
length of database: 14,973,337
effective HSP length: 103
effective length of query: 387
effective length of database: 8,527,803
effective search space: 3300259761
effective search space used: 3300259761
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)